Your job contains 1 sequence.
>004294
MPTGVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIAR
LREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQR
KELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASC
PNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPL
ELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPL
WMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQW
STVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEG
TWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLV
STGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCA
GVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLR
DENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTD
PTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLT
VAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004294
(763 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2207235 - symbol:HDG2 "AT1G05230" species:3702... 2955 5.4e-308 1
TAIR|locus:2119048 - symbol:ATML1 "AT4G21750" species:370... 2638 4.1e-294 2
TAIR|locus:2135368 - symbol:PDF2 "AT4G04890" species:3702... 2814 4.7e-293 1
TAIR|locus:2127008 - symbol:ANL2 "ANTHOCYANINLESS 2" spec... 1990 9.8e-206 1
TAIR|locus:2098866 - symbol:HDG1 "AT3G61150" species:3702... 1401 1.7e-198 2
TAIR|locus:2062540 - symbol:HDG3 "AT2G32370" species:3702... 1912 1.8e-197 1
TAIR|locus:2206880 - symbol:HDG11 "AT1G73360" species:370... 1636 3.2e-168 1
TAIR|locus:2145116 - symbol:HDG7 "AT5G52170" species:3702... 1025 5.3e-161 3
TAIR|locus:2030913 - symbol:HDG12 "homeodomain GLABROUS 1... 1554 1.6e-159 1
TAIR|locus:2129396 - symbol:HDG4 "AT4G17710" species:3702... 965 1.6e-132 2
TAIR|locus:2097770 - symbol:HDG8 "AT3G03260" species:3702... 1198 8.3e-122 1
TAIR|locus:2131814 - symbol:FWA "AT4G25530" species:3702 ... 1072 1.9e-108 1
TAIR|locus:2167230 - symbol:HDG9 "AT5G17320" species:3702... 726 9.2e-107 2
TAIR|locus:2023932 - symbol:HDG10 "AT1G34650" species:370... 727 9.4e-105 2
TAIR|locus:2182850 - symbol:AT5G07260 "AT5G07260" species... 353 4.5e-35 2
TAIR|locus:2175856 - symbol:REV "AT5G60690" species:3702 ... 172 9.1e-22 3
TAIR|locus:2061544 - symbol:PHB "AT2G34710" species:3702 ... 185 1.6e-21 4
TAIR|locus:2134088 - symbol:HB-8 "AT4G32880" species:3702... 169 1.6e-20 3
TAIR|locus:2028140 - symbol:PHV "AT1G30490" species:3702 ... 171 3.2e-20 3
TAIR|locus:2034086 - symbol:ATHB-15 "AT1G52150" species:3... 168 9.1e-19 3
TAIR|locus:2116442 - symbol:AT4G26920 "AT4G26920" species... 168 4.1e-09 1
UNIPROTKB|H0YLI9 - symbol:SHOX "Short stature homeobox pr... 149 4.4e-08 1
UNIPROTKB|H0YMR3 - symbol:SHOX "Short stature homeobox pr... 149 8.5e-08 2
UNIPROTKB|H0YJ32 - symbol:SHOX2 "Short stature homeobox p... 133 9.9e-08 1
UNIPROTKB|E1C121 - symbol:PITX1 "Pituitary homeobox 1" sp... 151 1.1e-07 1
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp... 131 1.6e-07 1
UNIPROTKB|O15266 - symbol:SHOX "Short stature homeobox pr... 149 1.7e-07 1
UNIPROTKB|F1NFE6 - symbol:SHOX "Uncharacterized protein" ... 143 2.3e-07 1
UNIPROTKB|E1C1I8 - symbol:LOC100858967 "Uncharacterized p... 140 2.3e-07 1
UNIPROTKB|D6RBG8 - symbol:PITX2 "Pituitary homeobox 2" sp... 129 2.7e-07 1
RGD|2320224 - symbol:LOC100364841 "rCG53272-like" species... 129 2.7e-07 1
TAIR|locus:2041283 - symbol:HB6 "homeobox protein 6" spec... 145 7.6e-07 2
UNIPROTKB|F1Q361 - symbol:SHOX "Uncharacterized protein" ... 143 8.2e-07 1
UNIPROTKB|K7GS77 - symbol:LOC100520816 "Uncharacterized p... 143 8.3e-07 1
ZFIN|ZDB-GENE-990415-236 - symbol:rx1 "retinal homeobox g... 144 8.8e-07 1
UNIPROTKB|F1SG33 - symbol:LOC100520816 "Uncharacterized p... 143 8.9e-07 1
ZFIN|ZDB-GENE-051030-21 - symbol:shox "short stature home... 143 9.3e-07 1
WB|WBGene00000439 - symbol:ceh-16 species:6239 "Caenorhab... 132 1.0e-06 1
UNIPROTKB|Q8N693 - symbol:ESX1 "Homeobox protein ESX1" sp... 144 1.4e-06 1
UNIPROTKB|G1K364 - symbol:LOC100858967 "Uncharacterized p... 141 1.4e-06 1
UNIPROTKB|P31258 - symbol:HOXA11 "Homeobox protein Hox-A1... 141 1.4e-06 1
RGD|1563291 - symbol:Rhox10 "reproductive homeobox 10" sp... 133 2.0e-06 1
RGD|620371 - symbol:Rax "retina and anterior neural fold ... 141 2.1e-06 1
UNIPROTKB|Q9JLT7 - symbol:Rax "Retinal homeobox protein R... 141 2.1e-06 1
UNIPROTKB|F1RSD4 - symbol:PRRX1 "Uncharacterized protein"... 120 2.4e-06 1
UNIPROTKB|E1BXQ7 - symbol:E1BXQ7 "Uncharacterized protein... 141 2.8e-06 1
MGI|MGI:109340 - symbol:Pitx2 "paired-like homeodomain tr... 139 2.9e-06 1
UNIPROTKB|F1P3H6 - symbol:F1P3H6 "Uncharacterized protein... 141 3.0e-06 1
TAIR|locus:2079542 - symbol:HB-12 "homeobox 12" species:3... 135 3.2e-06 1
UNIPROTKB|P78337 - symbol:PITX1 "Pituitary homeobox 1" sp... 138 3.6e-06 1
RGD|3674 - symbol:Shox2 "short stature homeobox 2" specie... 134 4.3e-06 1
UNIPROTKB|O35750 - symbol:Shox2 "Short stature homeobox p... 134 4.3e-06 1
FB|FBgn0020617 - symbol:Rx "Retinal Homeobox" species:722... 144 4.5e-06 1
UNIPROTKB|P56673 - symbol:PITX1 "Pituitary homeobox 1" sp... 137 4.6e-06 1
UNIPROTKB|Q9PVY0 - symbol:RX1 "Retinal homeobox protein R... 133 4.7e-06 1
UNIPROTKB|F1MU46 - symbol:PITX1 "Uncharacterized protein"... 137 4.7e-06 1
ZFIN|ZDB-GENE-990714-27 - symbol:pitx2 "paired-like homeo... 137 4.7e-06 1
UNIPROTKB|F1S139 - symbol:PITX2 "Uncharacterized protein"... 137 5.2e-06 1
FB|FBgn0025334 - symbol:PHDP "Putative homeodomain protei... 132 5.2e-06 1
UNIPROTKB|O93385 - symbol:PITX2 "Pituitary homeobox 2" sp... 137 5.4e-06 1
UNIPROTKB|G3X7M1 - symbol:SHOX "Uncharacterized protein" ... 136 5.7e-06 1
MGI|MGI:109632 - symbol:Rax "retina and anterior neural f... 137 5.8e-06 1
UNIPROTKB|E2RRG5 - symbol:PITX1 "Uncharacterized protein"... 136 6.1e-06 1
ZFIN|ZDB-GENE-990415-4 - symbol:hoxa11b "homeo box A11b" ... 135 6.1e-06 1
UNIPROTKB|F6Y4K5 - symbol:SHOX2 "Uncharacterized protein"... 136 6.3e-06 1
RGD|3331 - symbol:Pitx2 "paired-like homeodomain 2" speci... 136 6.6e-06 1
UNIPROTKB|A5D7J4 - symbol:PITX2 "Uncharacterized protein"... 136 6.6e-06 1
UNIPROTKB|E2R5R2 - symbol:PITX2 "Uncharacterized protein"... 136 6.6e-06 1
WB|WBGene00000450 - symbol:ceh-28 species:6239 "Caenorhab... 129 6.9e-06 1
UNIPROTKB|G5EE18 - symbol:ceh-28 "NK-2 family homeodomain... 129 6.9e-06 1
UNIPROTKB|E2QZN5 - symbol:SHOX2 "Uncharacterized protein"... 136 7.1e-06 1
UNIPROTKB|Q8NHV9 - symbol:RHOXF1 "Rhox homeobox family me... 126 7.2e-06 1
UNIPROTKB|A6NLG4 - symbol:SHOX2 "cDNA FLJ38019 fis, clone... 127 7.4e-06 1
UNIPROTKB|Q9Y2V3 - symbol:RAX "Retinal homeobox protein R... 136 7.6e-06 1
UNIPROTKB|F1P452 - symbol:PITX1 "Pituitary homeobox 1" sp... 135 7.8e-06 1
UNIPROTKB|F1NH36 - symbol:Gga.55791 "Uncharacterized prot... 133 8.0e-06 1
UNIPROTKB|D6RFI4 - symbol:PITX2 "Pituitary homeobox 2" sp... 134 8.4e-06 1
UNIPROTKB|F1S7P4 - symbol:RAX2 "Uncharacterized protein" ... 125 1.0e-05 1
UNIPROTKB|H0YIA6 - symbol:HOXA11 "Homeobox protein Hox-A1... 136 1.0e-05 2
ZFIN|ZDB-GENE-060421-3623 - symbol:pitx1 "paired-like hom... 133 1.0e-05 1
UNIPROTKB|Q9PVX0 - symbol:RX2 "Retinal homeobox protein R... 134 1.0e-05 1
UNIPROTKB|Q99697 - symbol:PITX2 "Pituitary homeobox 2" sp... 134 1.0e-05 1
RGD|1586211 - symbol:Hoxb8 "homeo box B8" species:10116 "... 114 1.1e-05 1
UNIPROTKB|I3L828 - symbol:SHOX2 "Uncharacterized protein"... 134 1.1e-05 1
ZFIN|ZDB-GENE-990415-237 - symbol:rx2 "retinal homeobox g... 134 1.1e-05 1
UNIPROTKB|F1MXQ1 - symbol:F1MXQ1 "Uncharacterized protein... 125 1.1e-05 1
UNIPROTKB|E1BLB9 - symbol:E1BLB9 "Uncharacterized protein... 134 1.2e-05 1
UNIPROTKB|O60902 - symbol:SHOX2 "Short stature homeobox p... 134 1.2e-05 1
UNIPROTKB|Q9IAL1 - symbol:VSX2 "Visual system homeobox 2"... 135 1.2e-05 1
UNIPROTKB|F1SMS6 - symbol:RAX "Uncharacterized protein" s... 134 1.3e-05 1
MGI|MGI:96172 - symbol:Hoxa11 "homeobox A11" species:1009... 133 1.3e-05 1
RGD|1564605 - symbol:Hoxa11 "homeobox A11" species:10116 ... 133 1.3e-05 1
UNIPROTKB|E1BHB8 - symbol:LOC615339 "Uncharacterized prot... 134 1.3e-05 1
UNIPROTKB|Q7YRX0 - symbol:RAX2 "Retina and anterior neura... 124 1.4e-05 1
UNIPROTKB|I3L383 - symbol:HOXB8 "Homeobox protein Hox-B8"... 113 1.4e-05 1
RGD|1595784 - symbol:Hoxc9 "homeobox C9" species:10116 "R... 113 1.4e-05 1
UNIPROTKB|P18866 - symbol:Hoxc8 "Homeobox protein Hox-C8"... 113 1.4e-05 1
UNIPROTKB|Q9NZR4 - symbol:VSX1 "Visual system homeobox 1"... 134 1.4e-05 1
ZFIN|ZDB-GENE-041229-4 - symbol:pitx3 "paired-like homeod... 132 1.4e-05 1
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 132 1.5e-05 1
WARNING: Descriptions of 274 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2207235 [details] [associations]
symbol:HDG2 "AT1G05230" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0010090 "trichome morphogenesis" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0010090 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 eggNOG:NOG261733 ProtClustDB:CLSN2681990
EMBL:AC000098 EMBL:AY037177 EMBL:AY091690 IPI:IPI00530516
PIR:G86186 RefSeq:NP_001184911.1 RefSeq:NP_172015.1
RefSeq:NP_849596.1 UniGene:At.19179 UniGene:At.50922
ProteinModelPortal:Q94C37 SMR:Q94C37 STRING:Q94C37 PaxDb:Q94C37
PRIDE:Q94C37 EnsemblPlants:AT1G05230.1 EnsemblPlants:AT1G05230.2
EnsemblPlants:AT1G05230.4 GeneID:839256 KEGG:ath:AT1G05230
TAIR:At1g05230 InParanoid:Q94C37 OMA:VGVITNQ PhylomeDB:Q94C37
Genevestigator:Q94C37 Uniprot:Q94C37
Length = 721
Score = 2955 (1045.3 bits), Expect = 5.4e-308, P = 5.4e-308
Identities = 584/732 (79%), Positives = 640/732 (87%)
Query: 38 NMMEGQLHPLDMTQNTSESEIARLREEEFDS--TKSGSENHEGASGDDQEQ-RPNKKKRY 94
N + H + N +E LR++EFDS TKSGSEN EG SG+DQ+ PNKKKRY
Sbjct: 12 NNADSNNHNYNHEDNNNEGF---LRDDEFDSPNTKSGSENQEGGSGNDQDPLHPNKKKRY 68
Query: 95 HRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHEN 154
HRHTQ QIQEMEAFFKECPHPDDKQRK+LSREL LEPLQVKFWFQNKRTQMK HERHEN
Sbjct: 69 HRHTQLQIQEMEAFFKECPHPDDKQRKQLSRELNLEPLQVKFWFQNKRTQMKNHHERHEN 128
Query: 155 TQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRIS 214
+ LR ENEKLR DN+RYREAL+NASCPNCGGPTAIGEMSFDEH LRLENARLREEIDRIS
Sbjct: 129 SHLRAENEKLRNDNLRYREALANASCPNCGGPTAIGEMSFDEHQLRLENARLREEIDRIS 188
Query: 215 AIAAKYVGKPVVNYXXXXXXXXXXX-XXXAVGNFGAQPGIGGGEMYG--AADLLRSISAP 271
AIAAKYVGKPV NY A+GN G GE YG DLL+SI+AP
Sbjct: 189 AIAAKYVGKPVSNYPLMSPPPLPPRPLELAMGNIG-------GEAYGNNPNDLLKSITAP 241
Query: 272 TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTG 331
TE+DKP+II+L+VAAMEEL+RM Q+ EPLW SL VL+E+EY RTFPRGIGP+P G
Sbjct: 242 TESDKPVIIDLSVAAMEELMRMVQVDEPLWK-SL-----VLDEEEYARTFPRGIGPRPAG 295
Query: 332 FKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQV 391
++ EASRE+AVVIMNH+++VEILMDVNQWST+F+G+VSRAMTL VLSTGVAGNYNGALQV
Sbjct: 296 YRSEASRESAVVIMNHVNIVEILMDVNQWSTIFAGMVSRAMTLAVLSTGVAGNYNGALQV 355
Query: 392 MTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQE 451
M+AEFQVPSPLVPTRE+Y+ RYCKQ G+G+WAVVD+SLD+L+P+P RCRRR SGCLIQE
Sbjct: 356 MSAEFQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQPNPPARCRRRASGCLIQE 415
Query: 452 MPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIP 511
+PNGYSKVTWVEHVEVDDRGVHNLYK +VSTG+AFGAKRWVA LDRQCERLASVMATNI
Sbjct: 416 LPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASVMATNIS 475
Query: 512 TGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDD 571
+GEVGVITNQ+GR+SMLKLAERMVISFCAGVSASTAHTWTTLSGTGA+DVRVMTRKSVDD
Sbjct: 476 SGEVGVITNQEGRRSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAEDVRVMTRKSVDD 535
Query: 572 PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGN 631
PGRPPGIVLSAATSFW+PVPPKRVFDFLRDEN+R+EWDILSNGGVVQEMAHIANGRDTGN
Sbjct: 536 PGRPPGIVLSAATSFWIPVPPKRVFDFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGN 595
Query: 632 CVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALL 691
CVSLLRVN SANSSQSNMLILQESCTDPTASFVIYAPVDIVAMN+VLNGGDPDYVALL
Sbjct: 596 CVSLLRVN---SANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNIVLNGGDPDYVALL 652
Query: 692 PSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTV 751
PSGFAILPDG + GA G+ GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTV
Sbjct: 653 PSGFAILPDGNANSGAPGGD---GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTV 709
Query: 752 ERIKASLSCESA 763
ERIKAS+SCE+A
Sbjct: 710 ERIKASMSCETA 721
>TAIR|locus:2119048 [details] [associations]
symbol:ATML1 "AT4G21750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0009913 "epidermal cell differentiation"
evidence=IGI] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AL161555 HSSP:Q6B2C0 EMBL:U37589
EMBL:AL035527 EMBL:AY091104 EMBL:AY150491 EMBL:AK229970
IPI:IPI00535360 PIR:T05850 RefSeq:NP_001031692.1 RefSeq:NP_193906.2
UniGene:At.2706 ProteinModelPortal:Q8RWU4 SMR:Q8RWU4 STRING:Q8RWU4
PRIDE:Q8RWU4 EnsemblPlants:AT4G21750.1 EnsemblPlants:AT4G21750.2
GeneID:828263 KEGG:ath:AT4G21750 TAIR:At4g21750 eggNOG:NOG261733
InParanoid:Q8RWU4 OMA:HAWTTLS PhylomeDB:Q8RWU4
ProtClustDB:CLSN2681990 Genevestigator:Q8RWU4 GO:GO:0048825
GO:GO:0009913 Uniprot:Q8RWU4
Length = 762
Score = 2638 (933.7 bits), Expect = 4.1e-294, Sum P(2) = 4.1e-294
Identities = 523/738 (70%), Positives = 596/738 (80%)
Query: 38 NMMEGQLHPLDMTQNTSESE--IARLREEEFDSTKSGSE----NHEGASGDDQEQRPNKK 91
NM E H DMT SE++ I EE+F+ TKSG+E N D QRPNKK
Sbjct: 5 NMFESHHHMFDMTPKNSENDLGITGSHEEDFE-TKSGAEVTMENPLEEELQDPNQRPNKK 63
Query: 92 KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
KRYHRHTQ QIQE+E+FFKECPHPDDKQRKELSREL LEPLQVKFWFQNKRTQMK QHER
Sbjct: 64 KRYHRHTQRQIQELESFFKECPHPDDKQRKELSRELSLEPLQVKFWFQNKRTQMKAQHER 123
Query: 152 HENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEID 211
HEN L++EN+KLRA+N RY++ALSNA+CPNCGGP AIGEMSFDE HLR+ENARLREEID
Sbjct: 124 HENQILKSENDKLRAENNRYKDALSNATCPNCGGPAAIGEMSFDEQHLRIENARLREEID 183
Query: 212 RISAIAAKYVGKPVVNYXXXXXXXXXXXXXXA------VGNFG----AQPGIGGGEMYGA 261
RISAIAAKYVGKP++ + VGNFG + G G EM+G+
Sbjct: 184 RISAIAAKYVGKPLMANSSSFPQLSSSHHIPSRSLDLEVGNFGNNNNSHTGFVG-EMFGS 242
Query: 262 ADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF 321
+D+LRS+S P+EADKPMI+ELAVAAMEEL+RMAQ G+PLW++S D + +LNE+EY RTF
Sbjct: 243 SDILRSVSIPSEADKPMIVELAVAAMEELVRMAQTGDPLWVSS-DNSVEILNEEEYFRTF 301
Query: 322 PRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGV 381
PRGIGPKP G + EASRE+ VVIMNHI+L+EILMDVNQWS+VF GIVSRA+TLEVLSTGV
Sbjct: 302 PRGIGPKPIGLRSEASRESTVVIMNHINLIEILMDVNQWSSVFCGIVSRALTLEVLSTGV 361
Query: 382 AGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCR 441
AGNYNGALQVMTAEFQVPSPLVPTRE+Y+VRYCKQH +G WAVVDVSLD+LRPSP R R
Sbjct: 362 AGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPSPITRSR 421
Query: 442 RRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCER 501
RRPSGCLIQE+ NGYSKVTWVEH+EVDDR VHN+YK LV+TG AFGAKRWVATLDRQCER
Sbjct: 422 RRPSGCLIQELQNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCER 481
Query: 502 LASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV 561
LAS MA+NIP ++ VIT+ +GRKSMLKLAERMV+SFC GV ASTAH WTTLS TG+DDV
Sbjct: 482 LASSMASNIPACDLSVITSPEGRKSMLKLAERMVMSFCTGVGASTAHAWTTLSTTGSDDV 541
Query: 562 RVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMA 621
RVMTRKS+DDPGRPPGIVLSAATSFW+PV PKRVFDFLRDEN+RSEWDILSNGG+VQEMA
Sbjct: 542 RVMTRKSMDDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSEWDILSNGGLVQEMA 601
Query: 622 HIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLN 681
HIANGRD GN VSLLRVN S NS QSNMLILQESCTD + S+VIYAPVDI+AMNVVL+
Sbjct: 602 HIANGRDPGNSVSLLRVN---SGNSGQSNMLILQESCTDASGSYVIYAPVDIIAMNVVLS 658
Query: 682 GGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVA 741
GGDPDYVALLPSGFAILPDG++ G A++G + ++ V T GS+
Sbjct: 659 GGDPDYVALLPSGFAILPDGSARGGGGSANASAGAGVEGGGEGNNLEVVTTTGSCGGSLL 718
Query: 742 TVN-NLIACTVERIKASL 758
TV ++ +V K SL
Sbjct: 719 TVAFQILVDSVPTAKLSL 736
Score = 210 (79.0 bits), Expect = 4.1e-294, Sum P(2) = 4.1e-294
Identities = 43/49 (87%), Positives = 47/49 (95%)
Query: 715 GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LI CTVERIKA+L+C+ A
Sbjct: 714 GGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAALACDGA 762
>TAIR|locus:2135368 [details] [associations]
symbol:PDF2 "AT4G04890" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161502 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 HSSP:Q6B2C0
eggNOG:NOG261733 ProtClustDB:CLSN2681990 GO:GO:0048825
GO:GO:0009913 EMBL:AF128393 EMBL:AB056455 EMBL:AF424560
EMBL:AY062575 EMBL:BT000144 IPI:IPI00536198 PIR:E85061
RefSeq:NP_567274.1 UniGene:At.4047 ProteinModelPortal:Q93V99
SMR:Q93V99 IntAct:Q93V99 PaxDb:Q93V99 PRIDE:Q93V99
EnsemblPlants:AT4G04890.1 GeneID:825828 KEGG:ath:AT4G04890
TAIR:At4g04890 InParanoid:Q93V99 OMA:MIPARHM PhylomeDB:Q93V99
Genevestigator:Q93V99 Uniprot:Q93V99
Length = 743
Score = 2814 (995.6 bits), Expect = 4.7e-293, P = 4.7e-293
Identities = 554/742 (74%), Positives = 631/742 (85%)
Query: 38 NMMEGQLHPLDMT-QNTSESE--IARLREEEFDSTKSGSE-NHEGASGD---DQEQRPNK 90
NM E H DMT ++TS+++ I RE++F+ TKSG+E E SG+ D QRPNK
Sbjct: 5 NMFESH-HMFDMTPKSTSDNDLGITGSREDDFE-TKSGTEVTTENPSGEELQDPSQRPNK 62
Query: 91 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
KKRYHRHTQ QIQE+E+FFKECPHPDDKQRKELSR+L LEPLQVKFWFQNKRTQMK Q E
Sbjct: 63 KKRYHRHTQRQIQELESFFKECPHPDDKQRKELSRDLNLEPLQVKFWFQNKRTQMKAQSE 122
Query: 151 RHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEI 210
RHEN L+++N+KLRA+N RY+EALSNA+CPNCGGP AIGEMSFDE HLR+ENARLREEI
Sbjct: 123 RHENQILKSDNDKLRAENNRYKEALSNATCPNCGGPAAIGEMSFDEQHLRIENARLREEI 182
Query: 211 DRISAIAAKYVGKPV-VNYXXXXXXXXXXXXXXAVGNFGAQPGIGGGEMYGAADLLRSIS 269
DRISAIAAKYVGKP+ ++ VGNFG Q G G EMYG D+LRS+S
Sbjct: 183 DRISAIAAKYVGKPLGSSFAPLAIHAPSRSLDLEVGNFGNQTGFVG-EMYGTGDILRSVS 241
Query: 270 APTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKP 329
P+E DKP+I+ELAVAAMEEL+RMAQ G+PLW+ S D + +LNE+EY RTFPRGIGPKP
Sbjct: 242 IPSETDKPIIVELAVAAMEELVRMAQTGDPLWL-STDNSVEILNEEEYFRTFPRGIGPKP 300
Query: 330 TGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGAL 389
G + EASR++AVVIMNHI+LVEILMDVNQWS VFSGIVSRA+TLEVLSTGVAGNYNGAL
Sbjct: 301 LGLRSEASRQSAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGVAGNYNGAL 360
Query: 390 QVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPS-PAVRCRRRPSGCL 448
QVMTAEFQVPSPLVPTRE+Y+VRYCKQH +G+WAVVDVSLD+LRPS P +R RRRPSGCL
Sbjct: 361 QVMTAEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLRPSTPILRTRRRPSGCL 420
Query: 449 IQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMAT 508
IQE+PNGYSKVTW+EH+EVDDR VHN+YK LV +G AFGAKRWVATL+RQCERLAS MA+
Sbjct: 421 IQELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMAS 480
Query: 509 NIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKS 568
NIP G++ VIT+ +GRKSMLKLAERMV+SFC+GV ASTAH WTT+S TG+DDVRVMTRKS
Sbjct: 481 NIP-GDLSVITSPEGRKSMLKLAERMVMSFCSGVGASTAHAWTTMSTTGSDDVRVMTRKS 539
Query: 569 VDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRD 628
+DDPGRPPGIVLSAATSFW+PV PKRVFDFLRDEN+R EWDILSNGG+VQEMAHIANG +
Sbjct: 540 MDDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRKEWDILSNGGMVQEMAHIANGHE 599
Query: 629 TGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYV 688
GNCVSLLRVN S NSSQSNMLILQESCTD + S+VIYAPVDIVAMNVVL+GGDPDYV
Sbjct: 600 PGNCVSLLRVN---SGNSSQSNMLILQESCTDASGSYVIYAPVDIVAMNVVLSGGDPDYV 656
Query: 689 ALLPSGFAILPDGT------SLHGANIGEAASG---GSLLTVAFQILVDSVPTAKLSLGS 739
ALLPSGFAILPDG+ + H + +SG GSLLTVAFQILVDSVPTAKLSLGS
Sbjct: 657 ALLPSGFAILPDGSVGGGDGNQHQEMVSTTSSGSCGGSLLTVAFQILVDSVPTAKLSLGS 716
Query: 740 VATVNNLIACTVERIKASLSCE 761
VATVN+LI CTVERIKA++SC+
Sbjct: 717 VATVNSLIKCTVERIKAAVSCD 738
>TAIR|locus:2127008 [details] [associations]
symbol:ANL2 "ANTHOCYANINLESS 2" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0048765 "root hair cell differentiation"
evidence=IMP] [GO:0006473 "protein acetylation" evidence=RCA]
[GO:0042335 "cuticle development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0043481 GO:GO:0042335 Gene3D:1.10.10.60
SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
EMBL:AF058919 EMBL:AL161472 EMBL:U85254 EMBL:AF077335 EMBL:AK226968
IPI:IPI00538459 PIR:T01237 RefSeq:NP_567183.2 UniGene:At.24442
ProteinModelPortal:Q0WV12 SMR:Q0WV12 STRING:Q0WV12 PaxDb:Q0WV12
PRIDE:Q0WV12 EnsemblPlants:AT4G00730.1 GeneID:828022
KEGG:ath:AT4G00730 TAIR:At4g00730 eggNOG:euNOG18333
HOGENOM:HOG000243256 InParanoid:Q0WV12 OMA:MAGTING PhylomeDB:Q0WV12
ProtClustDB:CLSN2685237 Genevestigator:Q0WV12 GO:GO:0048765
Uniprot:Q0WV12
Length = 802
Score = 1990 (705.6 bits), Expect = 9.8e-206, P = 9.8e-206
Identities = 397/712 (55%), Positives = 513/712 (72%)
Query: 60 RLREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
R REEE +S +SGS+N EG SG+DQ+ +P +KKRYHRHT QIQE+E+ FKECPHPD+
Sbjct: 103 RSREEEHES-RSGSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHPDE 161
Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSN 177
KQR ELS+ L LE QVKFWFQN+RTQMKTQ ERHEN LR EN+KLRA+NM REA+ N
Sbjct: 162 KQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRN 221
Query: 178 ASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYXXXXXXXXX 237
C NCGGP +G++S +EHHLR+ENARL++E+DR+ + K++G N+
Sbjct: 222 PICTNCGGPAMLGDVSLEEHHLRIENARLKDELDRVCNLTGKFLGHHH-NHHYNSSLELA 280
Query: 238 XXXXXAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMG 297
G+F P GGG +S K +++ELA+ AM+EL+++AQ
Sbjct: 281 VGTNNNGGHFAFPPDFGGGGGCLPPQQQQSTVINGIDQKSVLLELALTAMDELVKLAQSE 340
Query: 298 EPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDV 357
EPLW+ SLDG LN+DEY+RTF KPTG EASR + +VI+N ++LVE LMD
Sbjct: 341 EPLWVKSLDGERDELNQDEYMRTFS---STKPTGLATEASRTSGMVIINSLALVETLMDS 397
Query: 358 NQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQH 417
N+W+ +F V+RA T +V+S G+AG NGALQ+M AE QV SPLVP R ++R+CKQH
Sbjct: 398 NRWTEMFPCNVARATTTDVISGGMAGTINGALQLMNAELQVLSPLVPVRNVNFLRFCKQH 457
Query: 418 GEGTWAVVDVSLDNLRPSP--AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNL 475
EG WAVVDVS+D +R + A RR PSGC++Q++ NGYSKVTWVEH E D+ +H L
Sbjct: 458 AEGVWAVVDVSIDPVRENSGGAPVIRRLPSGCVVQDVSNGYSKVTWVEHAEYDENQIHQL 517
Query: 476 YKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMV 535
Y+ L+ +G FG++RW+ATL RQCE LA ++++++ + + IT GRKSMLKLA+RM
Sbjct: 518 YRPLLRSGLGFGSQRWLATLQRQCECLAILISSSVTSHDNTSIT-PGGRKSMLKLAQRMT 576
Query: 536 ISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKR 594
+FC+G+SA + H W+ L+ D DVRVMTRKSVDDPG PPGIVLSAATS WLP P+R
Sbjct: 577 FNFCSGISAPSVHNWSKLTVGNVDPDVRVMTRKSVDDPGEPPGIVLSAATSVWLPAAPQR 636
Query: 595 VFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLIL 654
++DFLR+E R EWDILSNGG +QEMAHI G+D G VSLLR N + N++QS+MLIL
Sbjct: 637 LYDFLRNERMRCEWDILSNGGPMQEMAHITKGQDQG--VSLLRSNAM---NANQSSMLIL 691
Query: 655 QESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEA-- 712
QE+C D + + V+YAPVDI AM+VV+NGGD YVALLPSGFA+LPDG + G G+
Sbjct: 692 QETCIDASGALVVYAPVDIPAMHVVMNGGDSSYVALLPSGFAVLPDG-GIDGGGSGDGDQ 750
Query: 713 --ASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
GGSLLTVAFQILV+++PTAKL++ SV TVNNLI+CTV++I+A+L CES
Sbjct: 751 RPVGGGSLLTVAFQILVNNLPTAKLTVESVETVNNLISCTVQKIRAALQCES 802
>TAIR|locus:2098866 [details] [associations]
symbol:HDG1 "AT3G61150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL137898 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256
ProtClustDB:CLSN2685237 KO:K09338 EMBL:AJ224338 EMBL:AY050866
EMBL:AY096757 IPI:IPI00541112 PIR:T47907 RefSeq:NP_191674.1
UniGene:At.21209 HSSP:Q8C172 ProteinModelPortal:Q9M2E8 SMR:Q9M2E8
IntAct:Q9M2E8 PaxDb:Q9M2E8 PRIDE:Q9M2E8 EnsemblPlants:AT3G61150.1
GeneID:825287 KEGG:ath:AT3G61150 TAIR:At3g61150 eggNOG:NOG267226
InParanoid:Q9M2E8 OMA:HTEYDEN PhylomeDB:Q9M2E8
Genevestigator:Q9M2E8 Uniprot:Q9M2E8
Length = 808
Score = 1401 (498.2 bits), Expect = 1.7e-198, Sum P(2) = 1.7e-198
Identities = 282/527 (53%), Positives = 370/527 (70%)
Query: 247 FGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLD 306
F G G G + + + +S + ++LA+AAM+EL++MAQ EPLW+ S D
Sbjct: 286 FEISNGTGSG-LVATVNRQQPVSVSDFDQRSRYLDLALAAMDELVKMAQTREPLWVRSSD 344
Query: 307 GTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSG 366
VLN++EY +F R +GPK GF EAS+E VI+N ++LVE LMD +W+ +F
Sbjct: 345 SGFEVLNQEEYDTSFSRCVGPKQDGFVSEASKEAGTVIINSLALVETLMDSERWAEMFPS 404
Query: 367 IVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVD 426
+VSR T E++S+G+ G NGAL +M AE Q+ SPLVP R+ ++R+CKQH EG WAVVD
Sbjct: 405 MVSRTSTTEIISSGMGGR-NGALHLMHAELQLLSPLVPVRQVSFLRFCKQHAEGVWAVVD 463
Query: 427 VSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAF 486
VS+D++R + CRR PSGCL+Q+M NGYSKVTW+EH E D+ +H LY+ L+ G AF
Sbjct: 464 VSIDSIREGSSSSCRRLPSGCLVQDMANGYSKVTWIEHTEYDENHIHRLYRPLLRCGLAF 523
Query: 487 GAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSAST 546
GA RW+A L RQCE L +M++ + T N +GRKSMLKLA+RM +FC GV AS+
Sbjct: 524 GAHRWMAALQRQCECLTILMSSTVSTSTNPSPINCNGRKSMLKLAKRMTDNFCGGVCASS 583
Query: 547 AHTWTTLS-GTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
W+ L+ G +DVR+MTRKSV++PG PPGI+L+AATS W+PV P+R+FDFL +E R
Sbjct: 584 LQKWSKLNVGNVDEDVRIMTRKSVNNPGEPPGIILNAATSVWMPVSPRRLFDFLGNERLR 643
Query: 606 SEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASF 665
SEWDILSNGG ++EMAHIA G D N VSLLR + + N++QS+MLILQE+ D +
Sbjct: 644 SEWDILSNGGPMKEMAHIAKGHDRSNSVSLLRASAI---NANQSSMLILQETSIDAAGAV 700
Query: 666 VIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG---TSLHGA----NIGEAA---SG 715
V+YAPVDI AM V+NGGD YVALLPSGFAILP+G T A +IG G
Sbjct: 701 VVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILPNGQAGTQRCAAEERNSIGNGGCMEEG 760
Query: 716 GSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
GSLLTVAFQILV+S+PTAKL++ SV TVNNLI+CTV++IKA+L C+S
Sbjct: 761 GSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCDS 807
Score = 543 (196.2 bits), Expect = 1.7e-198, Sum P(2) = 1.7e-198
Identities = 105/183 (57%), Positives = 137/183 (74%)
Query: 48 DMTQNTS--ESEIARL--REEEFDSTKSGSENHEGASGDDQE--QRP-NKKKRYHRHTQH 100
+M++N ES ++R R E+ +S +S S+N E SGDD + RP KKKRYHRHT
Sbjct: 62 EMSRNGEIMESNVSRKSSRGEDVES-RSESDNAEAVSGDDLDTSDRPLKKKKRYHRHTPK 120
Query: 101 QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTE 160
QIQ++E+ FKEC HPD+KQR +LSR L L+P QVKFWFQN+RTQMKTQ ERHEN LR E
Sbjct: 121 QIQDLESVFKECAHPDEKQRLDLSRRLNLDPRQVKFWFQNRRTQMKTQIERHENALLRQE 180
Query: 161 NEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKY 220
N+KLRA+NM REA+ N C NCGGP IGE+S +E HLR+EN+RL++E+DR+ A+ K+
Sbjct: 181 NDKLRAENMSVREAMRNPMCGNCGGPAVIGEISMEEQHLRIENSRLKDELDRVCALTGKF 240
Query: 221 VGK 223
+G+
Sbjct: 241 LGR 243
>TAIR|locus:2062540 [details] [associations]
symbol:HDG3 "AT2G32370" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048825 "cotyledon development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 KO:K09338 eggNOG:NOG261733 GO:GO:0048825
EMBL:AC005700 EMBL:EF988635 IPI:IPI00527257 PIR:C84732
RefSeq:NP_180796.2 UniGene:At.38083 ProteinModelPortal:Q9ZV65
SMR:Q9ZV65 PaxDb:Q9ZV65 PRIDE:Q9ZV65 EnsemblPlants:AT2G32370.1
GeneID:817798 KEGG:ath:AT2G32370 TAIR:At2g32370 InParanoid:A7LBA8
PhylomeDB:Q9ZV65 Genevestigator:Q9ZV65 Uniprot:Q9ZV65
Length = 725
Score = 1912 (678.1 bits), Expect = 1.8e-197, P = 1.8e-197
Identities = 385/722 (53%), Positives = 507/722 (70%)
Query: 50 TQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFF 109
T NT+ + +++FDS + S NH G++Q R +KKK+Y+RHTQ QI EMEAFF
Sbjct: 31 TDNTNAGNDSG--DQDFDSGNTSSGNHGEGLGNNQAPR-HKKKKYNRHTQLQISEMEAFF 87
Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNM 169
+ECPHPDDKQR +LS +LGL+P+Q+KFWFQNKRTQ K Q ER EN++LR N LR++N
Sbjct: 88 RECPHPDDKQRYDLSAQLGLDPVQIKFWFQNKRTQNKNQQERFENSELRNLNNHLRSENQ 147
Query: 170 RYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKY---VGKPVV 226
R REA+ A CP CGG TAIGEM+F+EHHLR+ NARL EEI ++S A K G PV
Sbjct: 148 RLREAIHQALCPKCGGQTAIGEMTFEEHHLRILNARLTEEIKQLSVTAEKISRLTGIPVR 207
Query: 227 NYXXXXXXXXXXXXXXAVGNFGAQPGIGGGEMYGAADLLRSISAPTEAD-KPMIIELAVA 285
++ +G+ G +G R + P +A+ KP+I+ELA
Sbjct: 208 SHPRVSPPNPPPNFEFGMGSKG---NVGNHS--------RETTGPADANTKPIIMELAFG 256
Query: 286 AMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIM 345
AMEEL+ MAQ+ EPLWM +GT+ LN DEY +TF G+GP+ GF+ EASRETA+V M
Sbjct: 257 AMEELLVMAQVAEPLWMGGFNGTSLALNLDEYEKTFRTGLGPRLGGFRTEASRETALVAM 316
Query: 346 NHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPT 405
+VE+LM N WST+F+GIV RA T E + AGN+NG LQ+M+AE+QV SPLV T
Sbjct: 317 CPTGIVEMLMQENLWSTMFAGIVGRARTHEQIMADAAGNFNGNLQIMSAEYQVLSPLVTT 376
Query: 406 RESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHV 465
RESY+VRYCKQ GEG WAVVD+S+D+L P+ ++CRRRPSGCLIQEM +GYSKVTWVEHV
Sbjct: 377 RESYFVRYCKQQGEGLWAVVDISIDHLLPNINLKCRRRPSGCLIQEMHSGYSKVTWVEHV 436
Query: 466 EVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATN---IPTGEVGVITNQD 522
EVDD G ++++++L+ TG AF A RWV TL RQCER++S+++T+ + +G+ +TN
Sbjct: 437 EVDDAGSYSIFEKLICTGQAFAANRWVGTLVRQCERISSILSTDFQSVDSGDHITLTNH- 495
Query: 523 GRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSA 582
G+ SMLK+AER+ +F AG++ +T T SG +D+RVMT KSV+DPG+PPG+++ A
Sbjct: 496 GKMSMLKIAERIARTFFAGMTNATGST--IFSGVEGEDIRVMTMKSVNDPGKPPGVIICA 553
Query: 583 ATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQ 642
ATSFWLP PP VFDFLR+ R WD+L NG ++ ++A I NG D NC SLLR
Sbjct: 554 ATSFWLPAPPNTVFDFLREATHRHNWDVLCNGEMMHKIAEITNGIDKRNCASLLR----- 608
Query: 643 SANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGG-DPDYVALLPSGFAILPDG 701
++S+S M+I+QE+ TDPTASFV+YAPVD+ +M++ L+GG DPD+V +LPSGFAI PDG
Sbjct: 609 HGHTSKSKMMIVQETSTDPTASFVLYAPVDMTSMDITLHGGGDPDFVVILPSGFAIFPDG 668
Query: 702 TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
T G GGSLLT++FQ+LV+S P A+LS+ SVAT NLI TV RIK C+
Sbjct: 669 TGKPGGK-----EGGSLLTISFQMLVESGPEARLSVSSVATTENLIRTTVRRIKDLFPCQ 723
Query: 762 SA 763
+A
Sbjct: 724 TA 725
>TAIR|locus:2206880 [details] [associations]
symbol:HDG11 "AT1G73360" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836 KO:K09338
EMBL:AC012396 EMBL:BT003979 EMBL:BT004915 IPI:IPI00520147
PIR:B96760 RefSeq:NP_177479.1 UniGene:At.34997
ProteinModelPortal:Q9FX31 SMR:Q9FX31 IntAct:Q9FX31 PaxDb:Q9FX31
PRIDE:Q9FX31 EnsemblPlants:AT1G73360.1 GeneID:843671
KEGG:ath:AT1G73360 TAIR:At1g73360 eggNOG:NOG70408 InParanoid:Q9FX31
OMA:MKLAQRM PhylomeDB:Q9FX31 ProtClustDB:CLSN2679864
Genevestigator:Q9FX31 Uniprot:Q9FX31
Length = 722
Score = 1636 (581.0 bits), Expect = 3.2e-168, P = 3.2e-168
Identities = 338/715 (47%), Positives = 466/715 (65%)
Query: 72 GSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
GS +H+G+ D KKKRYHRHT QIQ +E+ FKECPHPD+KQR +LSRELGL P
Sbjct: 20 GSHHHDGSETD------RKKKRYHRHTAQQIQRLESSFKECPHPDEKQRNQLSRELGLAP 73
Query: 132 LQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGE 191
Q+KFWFQN+RTQ+K QHER +N+ L+ EN+K+R +N+ REAL +A CPNCGGP +
Sbjct: 74 RQIKFWFQNRRTQLKAQHERADNSALKAENDKIRCENIAIREALKHAICPNCGGPPVSED 133
Query: 192 MSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYXXX-----XXXXXXXXXXXAVGN 246
FDE LR+ENA LREE++R+S IA+KY+G+P+ G
Sbjct: 134 PYFDEQKLRIENAHLREELERMSTIASKYMGRPISQLSTLHPMHISPLDLSMTSLTGCGP 193
Query: 247 FGAQPGIG-----GGEM-YGAADLLRSIS--APTEADKPMIIELAVAAMEELIRMAQMGE 298
FG P + G M G + L+S A ++ DKP++ +A+ AMEEL+R+ Q E
Sbjct: 194 FGHGPSLDFDLLPGSSMAVGPNNNLQSQPNLAISDMDKPIMTGIALTAMEELLRLLQTNE 253
Query: 299 PLWMTSLDGTAAVLNEDEYVRTFPRGIGP-KPTGFKCEASRETAVVIMNHISLVEILMDV 357
PLW T DG +LN Y FPR K F+ EASR + +V MN ++LV++ MD
Sbjct: 254 PLW-TRTDGCRDILNLGSYENVFPRSSNRGKNQNFRVEASRSSGIVFMNAMALVDMFMDC 312
Query: 358 NQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQH 417
+W+ +F I++ + TL V+S+G+ G + GAL ++ E +V SPLV TRE +RYC+Q
Sbjct: 313 VKWTELFPSIIAASKTLAVISSGMGGTHEGALHLLYEEMEVLSPLVATREFCELRYCQQT 372
Query: 418 GEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLY 476
+G+W VV+VS D + + R PSGCLIQ+MPNGYSKVTWVEH+E +++ VH LY
Sbjct: 373 EQGSWIVVNVSYDLPQFVSHSQSYRFPSGCLIQDMPNGYSKVTWVEHIETEEKELVHELY 432
Query: 477 KQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVG-VITNQDGRKSMLKLAERMV 535
++++ G AFGA RWV TL R CER AS+ + ++G VI + +G++SM++LA+RM+
Sbjct: 433 REIIHRGIAFGADRWVTTLQRMCERFASLSVPASSSRDLGGVILSPEGKRSMMRLAQRMI 492
Query: 536 ISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRV 595
++C VS S T +S +RV KS + P G VL AAT+FWLP P+ V
Sbjct: 493 SNYCLSVSRSNNTRSTVVSELNEVGIRVTAHKSPE----PNGTVLCAATTFWLPNSPQNV 548
Query: 596 FDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSN-MLIL 654
F+FL+DE TR +WD+LSNG VQE+AHI+NG GNC+S+LR +N++ SN MLIL
Sbjct: 549 FNFLKDERTRPQWDVLSNGNAVQEVAHISNGSHPGNCISVLR-----GSNATHSNNMLIL 603
Query: 655 QESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH----GANI- 709
QES TD + +FV+Y+PVD+ A+N+ ++G DP Y+ LL SGF I PDG + GA+
Sbjct: 604 QESSTDSSGAFVVYSPVDLAALNIAMSGEDPSYIPLLSSGFTISPDGNGSNSEQGGASTS 663
Query: 710 -GEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
G A++ GSL+TV FQI+V ++PTAKL++ SV TVNNLI TV +IK +LS +A
Sbjct: 664 SGRASASGSLITVGFQIMVSNLPTAKLNMESVETVNNLIGTTVHQIKTALSGPTA 718
>TAIR|locus:2145116 [details] [associations]
symbol:HDG7 "AT5G52170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 eggNOG:euNOG18333
HOGENOM:HOG000243256 HSSP:Q6B2C0 EMBL:AB025603 IPI:IPI00525258
RefSeq:NP_200030.1 UniGene:At.55500 ProteinModelPortal:Q9LTK3
SMR:Q9LTK3 EnsemblPlants:AT5G52170.1 GeneID:835293
KEGG:ath:AT5G52170 TAIR:At5g52170 InParanoid:Q9LTK3
PhylomeDB:Q9LTK3 Genevestigator:Q9LTK3 Uniprot:Q9LTK3
Length = 682
Score = 1025 (365.9 bits), Expect = 5.3e-161, Sum P(3) = 5.3e-161
Identities = 212/433 (48%), Positives = 295/433 (68%)
Query: 337 SRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEF 396
SRET +V++N ++LVE LMD N+W+ +F IV+ A TLEV+S G G+ NG++ +M AEF
Sbjct: 258 SRETGLVLINSLALVETLMDTNKWAEMFECIVAVASTLEVISNGSDGSRNGSILLMQAEF 317
Query: 397 QVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRC----RRRPSGCLIQEM 452
QV SPLVP ++ ++RYCKQHG+G WAVVDVS D R + ++ + PSGC+IQ++
Sbjct: 318 QVMSPLVPIKQKKFLRYCKQHGDGLWAVVDVSYDINRGNENLKSYGGSKMFPSGCIIQDI 377
Query: 453 PNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPT 512
NG SKVTW+EH E ++ H+LY+ L+S+ GA +W+ATL RQCE ++++ T
Sbjct: 378 GNGCSKVTWIEHSEYEESHTHSLYQPLLSSSVGLGATKWLATLQRQCESFTMLLSSEDHT 437
Query: 513 GEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGA-DDVRVMTRKSVDD 571
G + G KS+LKLA+RM ++F +G++AS H W L D R++TRKS++
Sbjct: 438 G-----LSHAGTKSILKLAQRMKLNFYSGITASCIHKWEKLLAENVGQDTRILTRKSLE- 491
Query: 572 PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGN 631
P GIVLSAATS WLPV +R+F+FL D R++WDILSNG ++ + G+ G+
Sbjct: 492 ---PSGIVLSAATSLWLPVTQQRLFEFLCDGKCRNQWDILSNGASMENTLLVPKGQQEGS 548
Query: 632 CVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALL 691
CVSLLR + ++S+MLILQE+ D + + V+YAPVDI +MN V++GGD YVALL
Sbjct: 549 CVSLLRA---AGNDQNESSMLILQETWNDVSGALVVYAPVDIPSMNTVMSGGDSAYVALL 605
Query: 692 PSGFAILPDGTSLHG------ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNN 745
PSGF+ILPDG+S + S G LLTV FQILV+S+PTAKL++ SV TVNN
Sbjct: 606 PSGFSILPDGSSSSSDQFDTDGGLVNQESKGCLLTVGFQILVNSLPTAKLNVESVETVNN 665
Query: 746 LIACTVERIKASL 758
LIACT+ +I+A+L
Sbjct: 666 LIACTIHKIRAAL 678
Score = 519 (187.8 bits), Expect = 5.3e-161, Sum P(3) = 5.3e-161
Identities = 98/190 (51%), Positives = 138/190 (72%)
Query: 40 MEGQLHPLDMTQNTSESE--IARLREEEFDSTKSGSENHEGASGDD--QEQRPNKKKR-- 93
M G L +DM++ + +L+++EF+S ++ + SGD+ QEQRP KKKR
Sbjct: 1 MNGDLE-VDMSRGDFNPSFFLGKLKDDEFESRSLSDDSFDAMSGDEDKQEQRPKKKKRKT 59
Query: 94 -YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERH 152
YHRHT +QIQE+E+FFKECPHP++KQR EL ++L LE Q+KFWFQN+RTQMKTQ ERH
Sbjct: 60 KYHRHTSYQIQELESFFKECPHPNEKQRLELGKKLTLESKQIKFWFQNRRTQMKTQLERH 119
Query: 153 ENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDR 212
EN L+ ENEKLR +N +E++ + C +CGG GE+SF++H LR+ENA+L+EE+DR
Sbjct: 120 ENVILKQENEKLRLENSFLKESMRGSLCIDCGGAVIPGEVSFEQHQLRIENAKLKEELDR 179
Query: 213 ISAIAAKYVG 222
I A+A +++G
Sbjct: 180 ICALANRFIG 189
Score = 61 (26.5 bits), Expect = 5.3e-161, Sum P(3) = 5.3e-161
Identities = 10/24 (41%), Positives = 19/24 (79%)
Query: 278 MIIELAVAAMEELIRMAQMGEPLW 301
M ++LA+ AM+EL+++A++ LW
Sbjct: 220 MFMDLAMEAMDELLKLAELETSLW 243
>TAIR|locus:2030913 [details] [associations]
symbol:HDG12 "homeodomain GLABROUS 12" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010091 "trichome
branching" evidence=IGI] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0031507
"heterochromatin assembly" evidence=RCA] [GO:0045787 "positive
regulation of cell cycle" evidence=RCA] [GO:0048451 "petal
formation" evidence=RCA] [GO:0048453 "sepal formation"
evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC034106 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836
KO:K09338 eggNOG:NOG70408 ProtClustDB:CLSN2679864 EMBL:AF424554
EMBL:BT001050 IPI:IPI00531481 PIR:D86314 RefSeq:NP_564041.2
UniGene:At.15827 ProteinModelPortal:Q9LMT8 SMR:Q9LMT8 PaxDb:Q9LMT8
PRIDE:Q9LMT8 EnsemblPlants:AT1G17920.1 GeneID:838371
KEGG:ath:AT1G17920 TAIR:At1g17920 InParanoid:Q9LMT8 OMA:CENIAMQ
PhylomeDB:Q9LMT8 Genevestigator:Q9LMT8 Uniprot:Q9LMT8
Length = 687
Score = 1554 (552.1 bits), Expect = 1.6e-159, P = 1.6e-159
Identities = 325/702 (46%), Positives = 455/702 (64%)
Query: 73 SENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPL 132
S+NH+ + + E++ KKKR+HRHT HQIQ +E+ F EC HPD+KQR +LSRELGL P
Sbjct: 7 SQNHDSS---ETEKKNKKKKRFHRHTPHQIQRLESTFNECQHPDEKQRNQLSRELGLAPR 63
Query: 133 QVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEM 192
Q+KFWFQN+RTQ K QHER +N L+ EN+K+R +N+ REA+ +A CP+CG +
Sbjct: 64 QIKFWFQNRRTQKKAQHERADNCALKEENDKIRCENIAIREAIKHAICPSCGDSPVNEDS 123
Query: 193 SFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYXXXXXXXXXXXXXXAVGNFGAQPG 252
FDE LR+ENA+LR+E++R+S+IAAK++G+P+ + F P
Sbjct: 124 YFDEQKLRIENAQLRDELERVSSIAAKFLGRPISHLPPLLNPMHVSPLEL----FHTGPS 179
Query: 253 IGGGEMYGAADLLRSISAPT-------EADKPMIIELAVAAMEELIRMAQMGEPLWMTSL 305
+ + G+ + S P+ E DK ++ +AV AMEEL+R+ Q EPLW+ +
Sbjct: 180 LDFDLLPGSCSSMSVPSLPSQPNLVLSEMDKSLMTNIAVTAMEELLRLLQTNEPLWIKT- 238
Query: 306 DGTAAVLNEDEYVRTFPRGI--GPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTV 363
DG VLN + Y F R G K EASR + VV N I+LV++LM+ + + +
Sbjct: 239 DGCRDVLNLENYENMFTRSSTSGGKKNNLGMEASRSSGVVFTNAITLVDMLMNSVKLTEL 298
Query: 364 FSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWA 423
F IV+ + TL V+S+G+ GN+ AL +M E QV SPLV TRE +RYC+Q GTWA
Sbjct: 299 FPSIVASSKTLAVISSGLRGNHGDALHLMIEELQVLSPLVTTREFCVLRYCQQIEHGTWA 358
Query: 424 VVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLYKQLVST 482
+V+VS + + R R PSGCLIQ+M NGYSKVTWVEH E +++ +H ++K +V
Sbjct: 359 IVNVSYEFPQFISQSRSYRFPSGCLIQDMSNGYSKVTWVEHGEFEEQEPIHEMFKDIVHK 418
Query: 483 GNAFGAKRWVATLDRQCERLASVMATNIPTGEVG-VITNQDGRKSMLKLAERMVISFCAG 541
G AFGA+RW+ATL R CER +++ + ++G VI + +G++S+++LA RMV +FC
Sbjct: 419 GLAFGAERWIATLQRMCERFTNLLEPATSSLDLGGVIPSPEGKRSIMRLAHRMVSNFCLS 478
Query: 542 VSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRD 601
V S T +SG +RV + KS +P G+VL AATSFWLP+ P+ VF+FL+D
Sbjct: 479 VGTSNNTRSTVVSGLDEFGIRVTSHKSRHEPN---GMVLCAATSFWLPISPQNVFNFLKD 535
Query: 602 ENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDP 661
E TR +WD+LSNG VQE+AHI NG + GNC+S+LR +A+SSQ+NMLILQESC D
Sbjct: 536 ERTRPQWDVLSNGNSVQEVAHITNGSNPGNCISVLRGF---NASSSQNNMLILQESCIDS 592
Query: 662 T-ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLT 720
+ A+ VIY PVD+ A+N+ ++G D Y+ +LPSGFAI PDG+S GGSL+T
Sbjct: 593 SSAALVIYTPVDLPALNIAMSGQDTSYIPILPSGFAISPDGSS---------KGGGSLIT 643
Query: 721 VAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
V FQI+V + AKL++ S+ TVNNLI TV +IK +L+C S
Sbjct: 644 VGFQIMVSGLQPAKLNMESMETVNNLINTTVHQIKTTLNCPS 685
>TAIR|locus:2129396 [details] [associations]
symbol:HDG4 "AT4G17710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338
HSSP:Q6B2C0 EMBL:Z97344 eggNOG:NOG264325 EMBL:AY133700
IPI:IPI00546205 PIR:B71447 RefSeq:NP_193506.2 UniGene:At.32974
ProteinModelPortal:Q8L7H4 SMR:Q8L7H4 IntAct:Q8L7H4 PaxDb:Q8L7H4
PRIDE:Q8L7H4 EnsemblPlants:AT4G17710.1 GeneID:827492
KEGG:ath:AT4G17710 TAIR:At4g17710 InParanoid:Q8L7H4
PhylomeDB:Q8L7H4 Genevestigator:Q8L7H4 Uniprot:Q8L7H4
Length = 709
Score = 965 (344.8 bits), Expect = 1.6e-132, Sum P(2) = 1.6e-132
Identities = 212/492 (43%), Positives = 314/492 (63%)
Query: 273 EADKPMIIELAVAAMEELIRMAQMGEPLWMTS-LDGTAAVLNEDEYVRTFPRGIGPKPTG 331
E +K + +ELAV+ EL +M + EPLW LD + LNE+EY + F +
Sbjct: 230 EEEKAIDMELAVSCARELAKMCDINEPLWNKKRLDNESVCLNEEEYKKMFLWPLMNDDDR 289
Query: 332 FKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQV 391
F+ EASR AV+++N I+LV+ +D ++WS +F IVS A T +++S+G +G +G L +
Sbjct: 290 FRREASRANAVIMLNCITLVKAFLDADKWSEMFFPIVSSAKTAQIISSGASGP-SGTLLL 348
Query: 392 MTAEFQVPSPLVPTRESYYVRYCKQHGE-GTWAVVDVSLDNLRPSPAV---RCRRRPSGC 447
M AE QV SPLVPTRE+Y++RY +Q+ E G W VVD +D ++P+ A + RR+PSGC
Sbjct: 349 MFAELQVVSPLVPTREAYFLRYVEQNAEEGKWMVVDFPIDRIKPASATTTDQYRRKPSGC 408
Query: 448 LIQEMPNGYSKVTWVEHVEVDDRGVHN-LYKQLVSTGNAFGAKRWVATLDRQCERLASVM 506
+IQ M NGYS+VTWVEHVEV+++ V + + ++ V +G AFGA+RW++ L RQCER+AS+M
Sbjct: 409 IIQAMRNGYSQVTWVEHVEVEEKHVQDEVVREFVESGVAFGAERWLSVLKRQCERMASLM 468
Query: 507 ATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTR 566
ATNI ++GVI + + RK+++KL++RMV +FC + S T D V++++R
Sbjct: 469 ATNIT--DLGVIPSVEARKNLMKLSQRMVKTFCLNIINSHGQAPTK------DTVKIVSR 520
Query: 567 KSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANG 626
K G+V A + LP ++VFD LRD S+ +IL G QE+AHIANG
Sbjct: 521 KVCG------GLVPCAVSVTLLPYSHQQVFDLLRDNQRLSQLEILFMGSSFQEVAHIANG 574
Query: 627 RDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPD 686
GN +SLLR+N +NSS + L+LQE+CTD + S ++Y+ VD VA+ + +NG DP
Sbjct: 575 SHLGNSISLLRINV--ESNSSHNVELMLQETCTDNSGSLLVYSTVDPVAVQLAMNGEDPS 632
Query: 687 YVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNL 746
+ LLP GF+++P S G +S LLTVA Q+L +V T +L L +V+ +N+
Sbjct: 633 EIPLLPVGFSVVPVNPS-DGVEGSSVSSPSCLLTVAIQVLGSNVTTERLDLSTVSVINHR 691
Query: 747 IACTVERIKASL 758
I TV RI ++L
Sbjct: 692 ICATVNRITSAL 703
Score = 355 (130.0 bits), Expect = 1.6e-132, Sum P(2) = 1.6e-132
Identities = 75/156 (48%), Positives = 94/156 (60%)
Query: 65 EFDSTKSGSENHEGASGDDQEQRPN--KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE 122
E S KS H+ EQ P KKKRYHRHT QIQ+MEA FKE HPD K R
Sbjct: 61 ESGSGKSTGSGHDPVENTAIEQEPPAAKKKRYHRHTASQIQQMEALFKENAHPDTKTRLR 120
Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPN 182
LS++LGL P+QVKFWFQNKRTQ+K Q R +N +L+ ENE L+ ++ + C
Sbjct: 121 LSKKLGLSPIQVKFWFQNKRTQIKAQQSRSDNAKLKAENETLKTESQNIQSNFQCLFCST 180
Query: 183 CGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAA 218
CG H+LRLENARLR+E+DR+ +I +
Sbjct: 181 CG------------HNLRLENARLRQELDRLRSIVS 204
Score = 49 (22.3 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 493 ATLDRQCERLASV--MATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSAS 545
A L ++ +RL S+ M P+ E+ TN++ +ML E I VS +
Sbjct: 190 ARLRQELDRLRSIVSMRNPSPSQEITPETNKNNNDNMLIAEEEKAIDMELAVSCA 244
>TAIR|locus:2097770 [details] [associations]
symbol:HDG8 "AT3G03260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 EMBL:AC012328
EMBL:AK117867 IPI:IPI00538783 RefSeq:NP_186976.2 UniGene:At.41007
ProteinModelPortal:Q9M9P4 SMR:Q9M9P4 PRIDE:Q9M9P4
EnsemblPlants:AT3G03260.1 GeneID:821305 KEGG:ath:AT3G03260
TAIR:At3g03260 InParanoid:Q9M9P4 OMA:LNMESVA PhylomeDB:Q9M9P4
Genevestigator:Q9M9P4 Uniprot:Q9M9P4
Length = 699
Score = 1198 (426.8 bits), Expect = 8.3e-122, P = 8.3e-122
Identities = 284/715 (39%), Positives = 403/715 (56%)
Query: 67 DSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE 126
D+ GS +E + D +Q N K+ HRHT QIQ +EA+FKECPHPD++QR +L RE
Sbjct: 2 DNNGGGSSGNEQYTSGDAKQ--NGKRTCHRHTPQQIQRLEAYFKECPHPDERQRNQLCRE 59
Query: 127 LGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGP 186
L LEP Q+KFWFQNKRTQ KTQ +R N LR ENE L++DN +AL + CP CGGP
Sbjct: 60 LKLEPDQIKFWFQNKRTQSKTQEDRSTNVLLRGENETLQSDNEAMLDALKSVLCPACGGP 119
Query: 187 TAIG--EMSFDEHHLRLENARLREEIDRISAIAAKYV-GKPVVNYXXXXXXXXXXXXXXA 243
G E + LR ENARL++ DRIS ++ +P V
Sbjct: 120 P-FGREERGHNLQKLRFENARLKDHRDRISNFVDQHKPNEPTVEDSLAYVPSLDRISYGI 178
Query: 244 VGNFGAQPGIGGGEMYGAADLLRSISAP-TEADKPMIIELAVAAMEELIRMAQMGEPLWM 302
G +P YG + P E D ++ E+A +A+EEL R+ E W+
Sbjct: 179 NGGNMYEPS----SSYGPPNFQIIQPRPLAETDMSLLSEIAASAVEELKRLFLAEEQFWV 234
Query: 303 TSLDGTAAVLNEDEYVRTFPRGIGP-KPTGFKCEASRETAVVIMNHISLVEILMDVNQWS 361
S V++ + Y R F + T E+S+ VV + I+L+++ +D +W
Sbjct: 235 KSCIDETYVIDTESYER-FSHAVKHFSSTTAHVESSKAVTVVHVEAINLIQMFLDPEKWK 293
Query: 362 TVFSGIVSRAMTLEVLSTG--VAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGE 419
+F IV++A T+ VL +G + GN N LQVM + + SPLVP RE VR C++ +
Sbjct: 294 ELFPTIVNKANTIHVLGSGLPIRGNCN-VLQVMWEQLHILSPLVPAREFMVVRCCQEIEK 352
Query: 420 GTWAVVDVS-LDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYK 477
G W + DVS N A C +RPSGCLIQ +P+ +SKV W+EHVEVD + H +Y+
Sbjct: 353 GIWIIADVSHRANFDFGNAA-CYKRPSGCLIQALPDAHSKVMWIEHVEVDHKLDTHKIYR 411
Query: 478 QLVSTGNAFGAKRWVATLDRQCERLA-SVMATNIPTGEVGVITNQDGRKSMLKLAERMVI 536
L+S G+ +GAKRW+ TL+R CER+A S + T P+ VIT + R+S++KL ERMV
Sbjct: 412 DLLSGGSGYGAKRWIVTLERMCERMALSSIQTLPPSDRSEVITTGEARRSVMKLGERMVK 471
Query: 537 SFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVF 596
+F ++ S + S G VRV R +++ G+PPGIV+SA++S +P+ P +VF
Sbjct: 472 NFNEMLTMSGKIDFPQQSKNG---VRVSIRMNIE-AGQPPGIVVSASSSLAIPLTPLQVF 527
Query: 597 DFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSAN--------SSQ 648
FL++ +TR +WDILS G VV E+A I G NCV++LRV+ N S +
Sbjct: 528 AFLQNLDTRQQWDILSYGTVVNEIARIVTGSSETNCVTILRVHPTHEENNDKMVVQDSCK 587
Query: 649 SNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGG-DPDYVALLPSGFAILPDGTSLHGA 707
+ML+LQ+ D ++YAP+D+ M+ ++G DP ++ +LPSGF I DG
Sbjct: 588 DDMLMLQDCYMDALGGMIVYAPMDMATMHFAVSGEVDPSHIPILPSGFVISSDGRR---- 643
Query: 708 NIGEAASGGSLLTVAFQILVDSVPTAKLSLG--SVATVNNLIACTVERIKASLSC 760
GG+LLTVAFQILV + SV TV+ LI+ T++RIK L+C
Sbjct: 644 --STVEDGGTLLTVAFQILVSGKANRSREVNEKSVDTVSALISSTIQRIKGLLNC 696
>TAIR|locus:2131814 [details] [associations]
symbol:FWA "AT4G25530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006349 "regulation of gene expression by genetic
imprinting" evidence=IEP] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009909 "regulation of flower development" evidence=IEP;RCA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] [GO:0009911
"positive regulation of flower development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0007275
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AL022197 EMBL:AL161563
Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0009911 GO:GO:0031047 HOGENOM:HOG000243256
GO:GO:0006349 EMBL:AF178688 EMBL:AF243535 IPI:IPI00545721
PIR:A85295 RefSeq:NP_567722.1 UniGene:At.2139
ProteinModelPortal:Q9FVI6 SMR:Q9FVI6 IntAct:Q9FVI6 STRING:Q9FVI6
PaxDb:Q9FVI6 PRIDE:Q9FVI6 EnsemblPlants:AT4G25530.1 GeneID:828658
KEGG:ath:AT4G25530 TAIR:At4g25530 eggNOG:NOG295539
InParanoid:Q9FVI6 PhylomeDB:Q9FVI6 Genevestigator:Q9FVI6
GermOnline:AT4G25530 Uniprot:Q9FVI6
Length = 686
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 251/683 (36%), Positives = 377/683 (55%)
Query: 85 EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
+Q + +R HR T +Q QE+E F+ E PHP ++QR EL + L + QVK WFQNKR
Sbjct: 35 DQDGGRMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNL 94
Query: 145 MKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
K ++ EN LR E+++L A + R A+ + C CG T G+ ++ L ENA
Sbjct: 95 EKINNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEYEVQKLMAENA 154
Query: 205 RLREEIDRISAIAAKYVGKPVVNYXXXXXXXXXXXXXXAVGNFGAQPGIGGGEMYGAADL 264
L EID+ ++ +Y+ P + PGI + +
Sbjct: 155 NLEREIDQFNS---RYLSHPKQRMVSTSEQAPSSS---------SNPGINATPVLDFSGG 202
Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTS-LDGTAAVLNEDEYVRTFPR 323
R+ +E + + + LA+ A+ ELI + ++ P WM + + V E R+
Sbjct: 203 TRT----SEKETSIFLNLAITALRELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFN 258
Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
+ KP G EASR +V M ++LV+ LMD +W VF+ IV A T +VLSTG G
Sbjct: 259 NV-TKPPGQIVEASRAKGLVPMTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVLSTGSGG 317
Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS-LDNLRPSPAVRCRR 442
+G+LQ + AEFQV SPLVP R+ ++RYCK+ +G W VVDV+ N P +R
Sbjct: 318 TKSGSLQQIQAEFQVISPLVPKRKVTFIRYCKEIRQGLWVVVDVTPTQNPTLLPYGCSKR 377
Query: 443 RPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERL 502
PSG +I ++ NGYS+VTW+E E ++ +H LY+ L+ G GAKRW+ATL R CE L
Sbjct: 378 LPSGLIIDDLSNGYSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESL 437
Query: 503 ASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTG-ADDV 561
+++ +TN+ E+ + G ++KLA+RM +++ G+++ + W + A ++
Sbjct: 438 STLSSTNLT--EISPGLSAKGATEIVKLAQRMTLNYYRGITSPSVDKWQKIQVENVAQNM 495
Query: 562 RVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMA 621
M RK+V++PG GIVLSA+TS WLPV +F F+ + R EWDIL+N ++E
Sbjct: 496 SFMIRKNVNEPGELTGIVLSASTSVWLPVNQHTLFAFISHLSFRHEWDILTNDTTMEETI 555
Query: 622 HIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLN 681
I + GN +SLL++ N+ ML+LQE D + + V+YAPV+ ++ +V
Sbjct: 556 RIQKAKRHGNIISLLKI-----VNNG---MLVLQEIWNDASGAMVVYAPVETNSIELVKR 607
Query: 682 GGDPDYVALLPSGFAILPDGT--SLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGS 739
G + D V LPSGF+I+PDG S H N G GG LLT QILV PTA L G+
Sbjct: 608 GENSDSVKFLPSGFSIVPDGVNGSYHRGNTG----GGCLLTFGLQILVGINPTAALIQGT 663
Query: 740 VATVNNLIACTVERIKASLSCES 762
V +V L+A T+ +IK++L ++
Sbjct: 664 VKSVETLMAHTIVKIKSALDLQT 686
>TAIR|locus:2167230 [details] [associations]
symbol:HDG9 "AT5G17320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AB005238 ProtClustDB:CLSN2679643
IPI:IPI00529269 RefSeq:NP_197234.1 UniGene:At.54882
ProteinModelPortal:Q9FFI0 SMR:Q9FFI0 EnsemblPlants:AT5G17320.1
GeneID:831598 KEGG:ath:AT5G17320 TAIR:At5g17320 eggNOG:KOG0493
InParanoid:Q9FFI0 PhylomeDB:Q9FFI0 Genevestigator:Q9FFI0
Uniprot:Q9FFI0
Length = 718
Score = 726 (260.6 bits), Expect = 9.2e-107, Sum P(2) = 9.2e-107
Identities = 179/505 (35%), Positives = 277/505 (54%)
Query: 272 TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTG 331
++ +K ++E A A+ E++ + QM + +W S V++ Y + F + T
Sbjct: 232 SQLEKIAMLEAAEKAVSEVLSLIQMDDTMWKKSSIDDRLVIDPGLYEKYFTK----TNTN 287
Query: 332 FKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQV 391
+ E+S++ VV M+ +L++I + +W+ +F IV+ A T+ VL + V +V
Sbjct: 288 GRPESSKDVVVVQMDAGNLIDIFLTAEKWARLFPTIVNEAKTIHVLDS-VDHRGKTFSRV 346
Query: 392 MTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS--LDNLRPSPAVR-CRRRPSGCL 448
+ + + SPLVP RE +R C+Q + W + DVS L N+ + C +RPSG L
Sbjct: 347 IYEQLHILSPLVPPREFMILRTCQQIEDNVWMIADVSCHLPNIEFDLSFPICTKRPSGVL 406
Query: 449 IQEMPNGYSKVTWVEHVEVDDRGV--HNLYKQLVSTGNAFGAKRWVATLDRQCERLASVM 506
IQ +P+G+SKVTW+EHV V+D V H LY+ L+ G +GA+RW TL+R CERL +
Sbjct: 407 IQALPHGFSKVTWIEHVVVNDNRVRPHKLYRDLLYGGFGYGARRWTVTLERTCERL--IF 464
Query: 507 ATNIPT----GEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVR 562
+T++P GV+ GR S++ L ERM+ +F + ++ S T +R
Sbjct: 465 STSVPALPNNDNPGVVQTIRGRNSVMHLGERMLRNFAWMMKMVNKLDFSPQSETNNSGIR 524
Query: 563 VMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAH 622
+ R + ++ G+PPG+++ A +S LP+PP +V+DFL++ R +WD+L +G E A
Sbjct: 525 IGVRIN-NEAGQPPGLIVCAGSSLSLPLPPVQVYDFLKNLEVRHQWDVLCHGNPATEAAR 583
Query: 623 IANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNG 682
G + N VS L + ++ N+ ++ILQ+S D V YAP+D+ ++G
Sbjct: 584 FVTGSNPRNTVSFLEPS-IRDINTK---LMILQDSFKDALGGMVAYAPMDLNTACAAISG 639
Query: 683 G-DPDYVALLPSGFAILPDGTSLHGANIGEAASGGS--LLTVAFQILVDSV---PTAKLS 736
DP + +LPSGF I DG G A GGS LLTVAFQILV P L
Sbjct: 640 DIDPTTIPILPSGFMISRDGRPSEGE-----AEGGSYTLLTVAFQILVSGPSYSPDTNLE 694
Query: 737 LGSVATVNNLIACTVERIKASLSCE 761
+ S TVN LI+ TV+RIKA L CE
Sbjct: 695 V-SATTVNTLISSTVQRIKAMLKCE 718
Score = 350 (128.3 bits), Expect = 9.2e-107, Sum P(2) = 9.2e-107
Identities = 71/164 (43%), Positives = 98/164 (59%)
Query: 67 DSTKSGSENHEGASG-DDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
D T+ + + E + D ++KK YHRHT QI +E +FKECPHPD+ QR+ L
Sbjct: 2 DFTRDDNSSDERENDVDANTNNRHEKKGYHRHTNEQIHRLETYFKECPHPDEFQRRLLGE 61
Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGG 185
EL L+P Q+KFWFQNKRTQ K+ +E+ +N LR EN K+R +N +AL+N CP CGG
Sbjct: 62 ELNLKPKQIKFWFQNKRTQAKSHNEKADNAALRAENIKIRRENESMEDALNNVVCPPCGG 121
Query: 186 PTAIGEMSFDEH--HLRLENARLREEIDRISAIAAKYVGKPVVN 227
G H LR +NA L++E +R+S +Y G + N
Sbjct: 122 -RGPGREDQLRHLQKLRAQNAYLKDEYERVSNYLKQYGGHSMHN 164
Score = 42 (19.8 bits), Expect = 2.9e-74, Sum P(2) = 2.9e-74
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 82 DDQEQRPNKKKRYHRHTQHQIQ 103
D+ E+ N K+Y H+ H ++
Sbjct: 145 DEYERVSNYLKQYGGHSMHNVE 166
>TAIR|locus:2023932 [details] [associations]
symbol:HDG10 "AT1G34650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 EMBL:AC007894 EMBL:AC023279
IPI:IPI00526139 PIR:B86470 RefSeq:NP_174724.1 UniGene:At.51941
ProteinModelPortal:Q9S9Z0 SMR:Q9S9Z0 EnsemblPlants:AT1G34650.1
GeneID:840369 KEGG:ath:AT1G34650 TAIR:At1g34650 InParanoid:Q9S9Z0
PhylomeDB:Q9S9Z0 ProtClustDB:CLSN2679643 Genevestigator:Q9S9Z0
Uniprot:Q9S9Z0
Length = 708
Score = 727 (261.0 bits), Expect = 9.4e-105, Sum P(2) = 9.4e-105
Identities = 184/513 (35%), Positives = 282/513 (54%)
Query: 264 LLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTS-LDGTAAVLNEDEYVRTFP 322
LL+ ++ +K + E+A A+ E++ + QM +W+ S +DG A +++ Y R F
Sbjct: 210 LLQHFQQLSQLEKNRMFEIAKNAVAEVMSLIQMEHSMWIKSTIDGRA-IIDPGNYKRYFT 268
Query: 323 RGIGPKP-TGFKC--EASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
+ K + + E+S E VV M+ +LV++ ++ +W+ +F IV+ A T+ VL +
Sbjct: 269 KNSHLKSRSALQSHHESSMEVVVVQMDARNLVDMFLNTEKWARLFPTIVTEAKTIHVLDS 328
Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS--LDNLR-PSP 436
+ +V+ + + SPLV RE +R C+Q E W + DVS L N+ S
Sbjct: 329 MDHPRQTFS-RVVYEQLHILSPLVLPREFIILRTCQQMKEDLWLIADVSCYLQNVEFEST 387
Query: 437 AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQLVSTGNAFGAKRWVATL 495
A C +RPSG LIQ +P+G SKVTW+EHVEV D+ H LY+ L+ G +GA+RW ATL
Sbjct: 388 APICTKRPSGVLIQALPHGRSKVTWIEHVEVTDKVWPHQLYRDLLYGGFGYGARRWTATL 447
Query: 496 DRQCERLASVMATNIP-TGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLS 554
R CERL+ T+ P T GV+ +GR+S++ L ERM+ +F + S S
Sbjct: 448 QRMCERLSLYSMTDFPPTDYPGVVKTIEGRRSVMSLGERMLKNFAWIMKMSDKLDLPQQS 507
Query: 555 GTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNG 614
G VR+ R + + G+PPG+++ A +S LP+PP +V+DFLR+ R +WD+ G
Sbjct: 508 GANNSGVRISVRTNTE-AGQPPGLIVCAGSSLSLPLPPLQVYDFLRNLEVRHQWDVHCQG 566
Query: 615 GVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDI- 673
V E A G D N V+ L Q ++ + ++ILQ+ D V+YAP+++
Sbjct: 567 NPVTEAARFVTGPDQKNNVTFL-----QPSSVGEYKLMILQDGFIDALGGMVVYAPMNLN 621
Query: 674 VAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGS--LLTVAFQILVDSVP 731
A + + DP + +LPSGF I D H ++ GGS LLT+AFQI V P
Sbjct: 622 TAYSAISGQVDPSTIPILPSGFIISRDS---HPSS--SEVDGGSMTLLTLAFQIFVTG-P 675
Query: 732 T--AKLSL-GSVATVNNLIACTVERIKASLSCE 761
+ L+L S TVN L++ V+RIKA L+CE
Sbjct: 676 SYYTDLNLKDSATTVNTLVSSAVQRIKAMLNCE 708
Score = 330 (121.2 bits), Expect = 9.4e-105, Sum P(2) = 9.4e-105
Identities = 72/212 (33%), Positives = 108/212 (50%)
Query: 75 NHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 134
+H +S D++ N ++ H H+ HQ+Q +EAFF ECPHPDD QR++L EL L+ Q+
Sbjct: 4 SHNDSSSDEEGIDSNNRR--H-HSNHQVQRLEAFFHECPHPDDSQRRQLGNELNLKHKQI 60
Query: 135 KFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSF 194
KFWFQN+RTQ + +E+ +N LR EN K+R N +AL CP CGGP E
Sbjct: 61 KFWFQNRRTQARIHNEKADNIALRVENMKIRCVNEAMEKALETVLCPPCGGPHGKEEQLC 120
Query: 195 DEHHLRLENARLREEIDRISAIAAKYVGKPVVNYXXXXXXXXXXXXXXAVGNFGAQPGIG 254
+ LR +N L+ E +R+S+ K+ G + + N A G
Sbjct: 121 NLQKLRTKNVILKTEYERLSSYLTKHGGYSIPSVDALPDLHGPSTYGSTSNNRPASYGSS 180
Query: 255 GGEMYGAADLLR-----SISAPTEADKPMIIE 281
+ + LLR + T KP++++
Sbjct: 181 SNHLPQQSSLLRRPFTRELINTTPLPKPVLLQ 212
>TAIR|locus:2182850 [details] [associations]
symbol:AT5G07260 "AT5G07260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] INTERPRO:IPR002913 EMBL:CP002688
GenomeReviews:BA000015_GR Pfam:PF01852 PROSITE:PS50848
EMBL:BT003974 EMBL:BT005131 IPI:IPI00531581 RefSeq:NP_196343.2
UniGene:At.23335 ProteinModelPortal:Q84JD1 PaxDb:Q84JD1
EnsemblPlants:AT5G07260.1 GeneID:830617 KEGG:ath:AT5G07260
TAIR:At5g07260 HOGENOM:HOG000147055 InParanoid:Q84JD1
PhylomeDB:Q84JD1 ProtClustDB:CLSN2686056 ArrayExpress:Q84JD1
Genevestigator:Q84JD1 Uniprot:Q84JD1
Length = 541
Score = 353 (129.3 bits), Expect = 4.5e-35, Sum P(2) = 4.5e-35
Identities = 115/398 (28%), Positives = 183/398 (45%)
Query: 312 LNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRA 371
LN DEY GF E SR +A V + SLV LM+ W +F I++
Sbjct: 120 LNLDEYYSKLFPWYARNAPGFVHEVSRASAFVPCDASSLVANLMNHVSWQKIFPSIIA-- 177
Query: 372 MTLEVLSTGVAGNYNGALQVMTAEFQVP-SPLVPTRESYYVRYCKQHGEGTWAVVDVSL- 429
V G LQ + F SPL+ TR +R + + TWA+ ++S+
Sbjct: 178 ------DVSVESQQRG-LQKINVNFMPQISPLIQTRNVKLLRRSRHIEDDTWAIAEISMY 230
Query: 430 -----DNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEH-VEVDDRGVHNLYKQLVSTG 483
+LRP R PSG LIQ + NG SKVT ++H V ++ G++ ++
Sbjct: 231 FSSYAQHLRPE----YMRFPSGYLIQHIANGISKVTILDHWVYKEEEGMNTF-----NSN 281
Query: 484 NAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVS 543
+ FGA+RW+ L + V +I G I +Q RK++L L+ MV FC+GV
Sbjct: 282 SEFGAQRWLTALQKHYYNTCPVSIPSI--GHNIQIFDQICRKNLLNLSSFMVNVFCSGVC 339
Query: 544 ASTAHTWTTLS--GTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRD 601
T W L+ G A+++R+ T++S G P +++SA + P+ +F +
Sbjct: 340 GITGQRWNRLNTVGVSANNIRMFTQESRGMSGIPC-VLVSATGLARMHTKPEVMFGLING 398
Query: 602 ENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDP 661
+ W L + ++E+ I ++ N VS+ + S ++QE+ D
Sbjct: 399 AEKQEIWSYLESAKDMKELIRIGRHPNSWNEVSVFSIEWKGS-----KEWYLIQETYYDE 453
Query: 662 TASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 699
+ + +I+ V+ +NGGD V LLPSGF I+P
Sbjct: 454 SGAMIIHTCVEAPYFAAAINGGDLSGVELLPSGFTIIP 491
Score = 239 (89.2 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 93/364 (25%), Positives = 165/364 (45%)
Query: 286 AMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYV-RTFPRGIGPKPTGFKCEASRETAVVI 344
+++E++ +A+ P+W TS +G LN DEY + FP P GF E SR +A V
Sbjct: 99 SLKEVVFLARQRTPMW-TS-NGR---LNLDEYYSKLFPWYARNAP-GFVHEVSRASAFVP 152
Query: 345 MNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVP-SPLV 403
+ SLV LM+ W +F I++ V G LQ + F SPL+
Sbjct: 153 CDASSLVANLMNHVSWQKIFPSIIA--------DVSVESQQRG-LQKINVNFMPQISPLI 203
Query: 404 PTRESYYVRYCKQHGEGTWAVVDVSL------DNLRPSPAVRCRRRPSGCLIQEMPNGYS 457
TR +R + + TWA+ ++S+ +LRP R PSG LIQ + NG S
Sbjct: 204 QTRNVKLLRRSRHIEDDTWAIAEISMYFSSYAQHLRPE----YMRFPSGYLIQHIANGIS 259
Query: 458 KVTWVEH-VEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVG 516
KVT ++H V ++ G++ ++ + FGA+RW+ L + V +I +
Sbjct: 260 KVTILDHWVYKEEEGMNTF-----NSNSEFGAQRWLTALQKHYYNTCPVSIPSIGHN-IQ 313
Query: 517 VITN--QDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGR 574
+ + ++ + S G++ + T+ G A+++R+ T++S G
Sbjct: 314 IFDQICRKNLLNLSSFMVNVFCSGVCGITGQRWNRLNTV-GVSANNIRMFTQESRGMSGI 372
Query: 575 PPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVS 634
P +++SA + P+ +F + + W L + ++E+ I ++ N VS
Sbjct: 373 PC-VLVSATGLARMHTKPEVMFGLINGAEKQEIWSYLESAKDMKELIRIGRHPNSWNEVS 431
Query: 635 LLRV 638
+ +
Sbjct: 432 VFSI 435
Score = 93 (37.8 bits), Expect = 4.5e-35, Sum P(2) = 4.5e-35
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 149 HERHENTQLRTENEKLRADNMRYREALSNAS-CPNCGGPTAIGEMSFDEHHLRLENARLR 207
H L +N+ LRA+N A+++ S C +C P +S +E L LENARLR
Sbjct: 3 HHLQTRIFLHQQNDLLRAENRARIHAMTSPSICRSCEEPI----ISTEERELWLENARLR 58
Query: 208 EEIDRIS 214
EID ++
Sbjct: 59 SEIDTLT 65
>TAIR|locus:2175856 [details] [associations]
symbol:REV "AT5G60690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0008289 "lipid binding" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0010014
"meristem initiation" evidence=RCA;IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010051 "xylem and phloem pattern
formation" evidence=RCA;IMP] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA;IMP] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA;IMP]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048589 "developmental growth"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AB005246 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 GO:GO:0010051 GO:GO:0009855
GO:GO:0009944 KO:K09338 HSSP:P10037 ProtClustDB:CLSN2679470
InterPro:IPR013978 Pfam:PF08670 GO:GO:0009956 GO:GO:0010014
EMBL:AF188994 EMBL:AY170127 EMBL:AF233592 EMBL:AK229564
EMBL:EF598684 EMBL:EF598685 EMBL:EF598686 EMBL:EF598687
EMBL:EF598688 EMBL:EF598689 EMBL:EF598690 EMBL:EF598691
EMBL:EF598692 EMBL:EF598693 EMBL:EF598694 EMBL:EF598695
EMBL:EF598696 EMBL:EF598697 EMBL:EF598698 EMBL:EF598699
EMBL:EF598700 EMBL:EF598701 EMBL:EF598702 EMBL:EF598703
EMBL:EF598704 EMBL:EF598705 EMBL:EF598706 IPI:IPI00531930
RefSeq:NP_200877.1 UniGene:At.49201 UniGene:At.7238
ProteinModelPortal:Q9SE43 SMR:Q9SE43 STRING:Q9SE43 PaxDb:Q9SE43
PRIDE:Q9SE43 EnsemblPlants:AT5G60690.1 GeneID:836190
KEGG:ath:AT5G60690 TAIR:At5g60690 eggNOG:NOG323815
InParanoid:Q9M5B6 OMA:TIELVYM PhylomeDB:Q9SE43
Genevestigator:Q9SE43 Uniprot:Q9SE43
Length = 842
Score = 172 (65.6 bits), Expect = 9.1e-22, Sum P(3) = 9.1e-22
Identities = 85/335 (25%), Positives = 148/335 (44%)
Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNH 347
L+ +A+ +++ GTA + ++ P +G +C A+R +V +
Sbjct: 158 LLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQRCNGVAARACGLVSLEP 217
Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
+ + EIL D W F S LEV + AGN G ++++ + P+ L P R+
Sbjct: 218 MKIAEILKDRPSW---FRDCRS----LEVFTMFPAGN-GGTIELVYMQTYAPTTLAPARD 269
Query: 408 SYYVRYCKQHGEGTWAVVDVSLDN--LRPSPA-----VRCRRRPSGCLIQEMPNGYSKVT 460
+ +RY G++ V + SL P+ A VR SG LI+ G S +
Sbjct: 270 FWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQFVRAEMLSSGYLIRPCDGGGSIIH 329
Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITN 520
V+H+ ++ V ++ + L + K ++ L R +LA +N GEV +
Sbjct: 330 IVDHLNLEAWSVPDVLRPLYESSKVVAQKMTISAL-RYIRQLAQ--ESN---GEV--VYG 381
Query: 521 QDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTGADD--VRVMTRKSVDDPGRPP- 576
+ ++L+ ++R+ F V+ W+T+ GA+D V + + K +++
Sbjct: 382 LGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWSTMHCDGAEDIIVAINSTKHLNNISNSLS 441
Query: 577 --GIVLSAATSFWLP-VPPKRVFDFLRDENTRSEW 608
G VL A S L VPP + FLR+ RSEW
Sbjct: 442 FLGGVLCAKASMLLQNVPPAVLIRFLREH--RSEW 474
Score = 169 (64.5 bits), Expect = 9.1e-22, Sum P(3) = 9.1e-22
Identities = 37/116 (31%), Positives = 59/116 (50%)
Query: 75 NHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGL----E 130
NH S D + + +Y R+T Q++ +E + ECP P +R++L RE + E
Sbjct: 7 NHRERSSDSMNRHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIE 66
Query: 131 PLQVKFWFQNKRTQMKTQHERHE----NTQLRTENEKLRADNMRYREALSNASCPN 182
P Q+K WFQN+R + K + E N +L N+ L +N R ++ +S C N
Sbjct: 67 PKQIKVWFQNRRCRDKQRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVCEN 122
Score = 48 (22.0 bits), Expect = 9.1e-22, Sum P(3) = 9.1e-22
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 685 PDYVALLPSGFAILP 699
PD L+PSGF ++P
Sbjct: 572 PDDAPLVPSGFRVIP 586
Score = 45 (20.9 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 686 DYVALLPSGFAILPDG 701
D+ L+ GFA LP G
Sbjct: 783 DFAKLMQQGFACLPSG 798
>TAIR|locus:2061544 [details] [associations]
symbol:PHB "AT2G34710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0080060 "integument
development" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010075 "regulation of meristem growth" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010162
"seed dormancy process" evidence=RCA] [GO:0010182 "sugar mediated
signaling pathway" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010564 "regulation
of cell cycle process" evidence=RCA] [GO:0016049 "cell growth"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0033044 "regulation
of chromosome organization" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048366 "leaf development"
evidence=RCA] [GO:0048589 "developmental growth" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0048825 "cotyledon development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
[GO:0009955 "adaxial/abaxial pattern specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC003096
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009944 KO:K09338 EMBL:Y11122 EMBL:AJ441291
EMBL:AY099791 EMBL:BT000335 IPI:IPI00538463 PIR:T01364
RefSeq:NP_181018.1 UniGene:At.37771 HSSP:P10037
ProteinModelPortal:O04291 SMR:O04291 IntAct:O04291 STRING:O04291
PaxDb:O04291 PRIDE:O04291 EnsemblPlants:AT2G34710.1 GeneID:818036
KEGG:ath:AT2G34710 TAIR:At2g34710 eggNOG:NOG264261
HOGENOM:HOG000272677 InParanoid:O04291 OMA:NRKLNAM PhylomeDB:O04291
ProtClustDB:CLSN2679470 Genevestigator:O04291 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 Uniprot:O04291
Length = 852
Score = 185 (70.2 bits), Expect = 1.6e-21, Sum P(4) = 1.6e-21
Identities = 82/341 (24%), Positives = 144/341 (42%)
Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNH 347
L+ +A+ +++ GTA + ++ P IG C A+R +V +
Sbjct: 171 LLSIAEEALAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAISRNCSGIAARACGLVSLEP 230
Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
+ + EIL D W + +++ LS AGN G ++++ + P+ L R+
Sbjct: 231 MKVAEILKDRPSW-------LRDCRSVDTLSVIPAGN-GGTIELIYTQMYAPTTLAAARD 282
Query: 408 SYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVT 460
+ +RY +G++ V + SL + P VR +PSG LI+ G S +
Sbjct: 283 FWTLRYSTCLEDGSYVVCERSLTSATGGPTGPPSSNFVRAEMKPSGFLIRPCDGGGSILH 342
Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITN 520
V+HV++D V + + L + K VA L R ++A + + G
Sbjct: 343 IVDHVDLDAWSVPEVMRPLYESSKILAQKMTVAAL-RHVRQIAQETSGEVQYG------- 394
Query: 521 QDGRK-SMLK-LAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDD------- 571
GR+ ++L+ ++R+ F V+ W+ + GA+DV VM S
Sbjct: 395 -GGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMGSDGAEDVTVMINLSPGKFGGSQYG 453
Query: 572 ----PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
P G++ + A+ VPP + FLR+ RSEW
Sbjct: 454 NSFLPSFGSGVLCAKASMLLQNVPPAVLVRFLREH--RSEW 492
Score = 152 (58.6 bits), Expect = 1.6e-21, Sum P(4) = 1.6e-21
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 93 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
+Y R+T Q++ +E + ECP P +R++L RE +EP Q+K WFQN+R + K
Sbjct: 25 KYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 82
Query: 149 HERHENTQLRTENEKLRADN 168
+R E +L+T N KL A N
Sbjct: 83 -QRKEAARLQTVNRKLNAMN 101
Score = 46 (21.3 bits), Expect = 1.6e-21, Sum P(4) = 1.6e-21
Identities = 18/66 (27%), Positives = 38/66 (57%)
Query: 702 TSLHGAN--IGEAASGG----SLLTVAFQILVDSVPTAKLSLGSVAT--VNNLIACTVER 753
++L G+ GEA G S+LT+AFQ D+ ++ S+ S+A V +++ +++R
Sbjct: 624 SALEGSTRQAGEADPNGCNFRSVLTIAFQFTFDN--HSRDSVASMARQYVRSIVG-SIQR 680
Query: 754 IKASLS 759
+ +++
Sbjct: 681 VALAIA 686
Score = 45 (20.9 bits), Expect = 1.6e-21, Sum P(4) = 1.6e-21
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 686 DYVALLPSGFAILP 699
D LLPSGF I+P
Sbjct: 591 DDAPLLPSGFRIIP 604
Score = 41 (19.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 539 CAGVSASTAHTWTTLSGTGADDVR--------VMTRKSVDDPGR 574
C + + + +T + TG D + +M K++D+PGR
Sbjct: 748 CCSLKTNASPVFTFANQTGLDMLETTLVALQDIMLDKTLDEPGR 791
>TAIR|locus:2134088 [details] [associations]
symbol:HB-8 "AT4G32880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0010089 "xylem development"
evidence=RCA;IMP] [GO:0045597 "positive regulation of cell
differentiation" evidence=IMP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0010014 "meristem initiation"
evidence=RCA;IMP] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA;IMP] [GO:0010067 "procambium
histogenesis" evidence=IEP] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009880 "embryonic pattern specification" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016049
"cell growth" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042546 "cell wall biogenesis"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0048589 "developmental growth" evidence=RCA] [GO:0048765 "root
hair cell differentiation" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] InterPro:IPR001356 InterPro:IPR004827
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00338 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0008284 GO:GO:0043565 GO:GO:0045597 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0010089 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 InterPro:IPR013978
Pfam:PF08670 EMBL:AL161582 EMBL:Z50851 EMBL:AJ441292 EMBL:AY099631
EMBL:BT008798 IPI:IPI00546637 PIR:T10695 RefSeq:NP_195014.1
UniGene:At.31628 ProteinModelPortal:Q39123 SMR:Q39123 IntAct:Q39123
STRING:Q39123 PaxDb:Q39123 PRIDE:Q39123 EnsemblPlants:AT4G32880.1
GeneID:829424 KEGG:ath:AT4G32880 TAIR:At4g32880 eggNOG:NOG325934
InParanoid:Q39123 OMA:DAVMCCS PhylomeDB:Q39123
Genevestigator:Q39123 GO:GO:0010067 Uniprot:Q39123
Length = 833
Score = 169 (64.5 bits), Expect = 1.6e-20, Sum P(3) = 1.6e-20
Identities = 79/331 (23%), Positives = 140/331 (42%)
Query: 301 WMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVN 358
+++ GTA + ++ P IG C A+R +V ++ + EIL D
Sbjct: 168 FISKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGIAARACGLVGLDPTRVAEILKDKP 227
Query: 359 QWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHG 418
W + +L++++ N G L+++ + P+ L P R+ + +RY
Sbjct: 228 CW-------LRDCRSLDIVNVLSTAN-GGTLELIYMQLYAPTTLAPARDFWMLRYTSVME 279
Query: 419 EGTWAVVDVSLDNLR------PSPA-VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG 471
+G+ + + SL+N + PSP VR PSG LI+ G S + V+H +++
Sbjct: 280 DGSLVICERSLNNTQNGPSMPPSPHFVRAEILPSGYLIRPCEGGGSILHIVDHFDLEPWS 339
Query: 472 VHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK-L 530
V + + L + + +A L R +++ ++ P +T R + L+ L
Sbjct: 340 VPEVLRSLYESSTLLAQRTTMAAL-RYLRQISQEISQ--PN-----VTGWGRRPAALRAL 391
Query: 531 AERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKS----VDDPGRP--------PGI 578
++R+ F V+ + W+ L G DDV ++ S + P P
Sbjct: 392 SQRLSKGFNEAVNGFSDEGWSILESDGIDDVTLLVNSSPTKMMMTSSLPFANGYTSMPSA 451
Query: 579 VLSAATSFWLP-VPPKRVFDFLRDENTRSEW 608
VL A S L VPP + FLR+ R EW
Sbjct: 452 VLCAKASMLLQNVPPSILLRFLREH--RQEW 480
Score = 149 (57.5 bits), Expect = 1.6e-20, Sum P(3) = 1.6e-20
Identities = 33/95 (34%), Positives = 52/95 (54%)
Query: 78 GASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQ 133
G ++ N K Y R+T Q++ +E + +CP P +R++L RE +EP Q
Sbjct: 2 GGGSNNSHNMDNGK--YVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQ 59
Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
+K WFQN+R + K +R E ++L+ N KL A N
Sbjct: 60 IKVWFQNRRCREK---QRKEASRLQAVNRKLTAMN 91
Score = 59 (25.8 bits), Expect = 1.6e-20, Sum P(3) = 1.6e-20
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 656 ESCTD----PT-ASFVIYAPV-----DIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH 705
ESC + P ASF AP+ I+ ++ G P+ L S + G+
Sbjct: 562 ESCAELIFAPIDASFSDDAPIIPSGFRIIPLDSKSEGLSPNRTLDLASALDV---GSRTA 618
Query: 706 GANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
G + G + S++T+AFQ+ + ++ + V ++IA +V+R+ +LS S
Sbjct: 619 GDSCGSRGNSKSVMTIAFQLAFEMHMQENVASMARQYVRSVIA-SVQRVALALSPSS 674
Score = 56 (24.8 bits), Expect = 3.2e-20, Sum P(3) = 3.2e-20
Identities = 28/121 (23%), Positives = 47/121 (38%)
Query: 614 GGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQE-SCTDPTA----SFVIY 668
G V+ +AH + + L + Q +++ +LQ S D A + +I+
Sbjct: 510 GQVILPLAHTIENEEFMEVIKLESLGHYQEDMMMPADIFLLQMCSGVDENAVESCAELIF 569
Query: 669 APVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVD 728
AP+D D ++PSGF I+P + G + S L V + D
Sbjct: 570 APID---------ASFSDDAPIIPSGFRIIPLDSKSEGLSPNRTLDLASALDVGSRTAGD 620
Query: 729 S 729
S
Sbjct: 621 S 621
Score = 48 (22.0 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 117 DKQRKELSR----ELGLEPLQVKFWFQNKRTQMKTQHERHENTQLR 158
+KQRKE SR L + +N R Q + H +EN+ R
Sbjct: 71 EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSYFR 116
Score = 47 (21.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 19/54 (35%), Positives = 25/54 (46%)
Query: 673 IVAMNVVLNGGDPDYVA-LLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQI 725
I A L G DP VA +L L D SL N+ A+GG+L + Q+
Sbjct: 204 IAARACGLVGLDPTRVAEILKDKPCWLRDCRSLDIVNVLSTANGGTLELIYMQL 257
Score = 39 (18.8 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 631 NCVSLLRVNCLQSANSSQSNMLILQ 655
+C SL VN L +AN ++ +Q
Sbjct: 232 DCRSLDIVNVLSTANGGTLELIYMQ 256
Score = 38 (18.4 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 685 PDYVA--LLPSGFAILP---DGTSLH 705
P +V +LPSG+ I P G+ LH
Sbjct: 303 PHFVRAEILPSGYLIRPCEGGGSILH 328
>TAIR|locus:2028140 [details] [associations]
symbol:PHV "AT1G30490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009943 "adaxial/abaxial axis specification"
evidence=IMP] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009880 "embryonic pattern
specification" evidence=IGI] [GO:0080060 "integument development"
evidence=IGI] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010051
"xylem and phloem pattern formation" evidence=RCA] [GO:0010073
"meristem maintenance" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC009917
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009880 GO:GO:0009944 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 EMBL:Y10922 EMBL:AJ440967
EMBL:AK221046 EMBL:AK226570 IPI:IPI00523245 PIR:H86429
RefSeq:NP_174337.1 UniGene:At.27961 UniGene:At.33151
ProteinModelPortal:O04292 SMR:O04292 IntAct:O04292 STRING:O04292
PRIDE:O04292 EnsemblPlants:AT1G30490.1 GeneID:839928
KEGG:ath:AT1G30490 TAIR:At1g30490 eggNOG:NOG326783
InParanoid:O04292 OMA:ICRSYRI PhylomeDB:O04292
Genevestigator:O04292 Uniprot:O04292
Length = 841
Score = 171 (65.3 bits), Expect = 3.2e-20, Sum P(3) = 3.2e-20
Identities = 78/310 (25%), Positives = 131/310 (42%)
Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAM-TLEVLS 378
P IG C A+R +V + + + EIL D W F R + TL V+
Sbjct: 199 PDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILKDRPSW---FRDC--RCVETLNVIP 253
Query: 379 TGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA- 437
TG N G ++++ + P+ L R+ + +RY +G++ V + SL + P
Sbjct: 254 TG---N-GGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATGGPNG 309
Query: 438 ------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRW 491
VR + SG LI+ G S + V+HV++D V + + L + K
Sbjct: 310 PLSSSFVRAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMT 369
Query: 492 VATLDRQCERLASVMATNIPTGEVGVITNQDGRK-SMLK-LAERMVISFCAGVSASTAHT 549
VA L R ++A + GEV GR+ ++L+ ++R+ F V+
Sbjct: 370 VAAL-RHVRQIAQETS-----GEVQY---SGGRQPAVLRTFSQRLCRGFNDAVNGFVDDG 420
Query: 550 WTTLSGTGADDVRVMTRKSVDD-----------PGRPPGIVLSAATSFWLPVPPKRVFDF 598
W+ +S G +D+ +M S P G++ + A+ VPP + F
Sbjct: 421 WSPMSSDGGEDITIMINSSSAKFAGSQYGSSFLPSFGSGVLCAKASMLLQNVPPLVLIRF 480
Query: 599 LRDENTRSEW 608
LR+ R+EW
Sbjct: 481 LREH--RAEW 488
Score = 159 (61.0 bits), Expect = 3.2e-20, Sum P(3) = 3.2e-20
Identities = 37/96 (38%), Positives = 57/96 (59%)
Query: 80 SGDDQEQRPNK---KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPL 132
S DD++ P+K +Y R+T Q++ +E + ECP P +R++L RE +EP
Sbjct: 6 SMDDRDS-PDKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPR 64
Query: 133 QVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
Q+K WFQN+R + K +R E+ +L+T N KL A N
Sbjct: 65 QIKVWFQNRRCREK---QRKESARLQTVNRKLSAMN 97
Score = 44 (20.5 bits), Expect = 3.2e-20, Sum P(3) = 3.2e-20
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 686 DYVALLPSGFAILP 699
D LLPSGF ++P
Sbjct: 587 DDAPLLPSGFRVIP 600
>TAIR|locus:2034086 [details] [associations]
symbol:ATHB-15 "AT1G52150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA;IMP]
[GO:0010014 "meristem initiation" evidence=RCA;IMP] [GO:0009887
"organ morphogenesis" evidence=RCA;IMP] [GO:0010073 "meristem
maintenance" evidence=RCA;TAS] [GO:0010075 "regulation of meristem
growth" evidence=RCA;IMP] [GO:0010087 "phloem or xylem
histogenesis" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] [GO:0080060 "integument development"
evidence=IGI] [GO:0006995 "cellular response to nitrogen
starvation" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009944 "polarity specification of adaxial/abaxial axis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010089 "xylem development" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0009965 GO:GO:0010087 KO:K09338
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 GO:GO:0010075 GO:GO:0048263
EMBL:AC006216 GO:GO:0010014 IPI:IPI00545601 RefSeq:NP_849795.1
UniGene:At.11011 ProteinModelPortal:B3H4G8 SMR:B3H4G8 STRING:B3H4G8
PRIDE:B3H4G8 EnsemblPlants:AT1G52150.2 GeneID:841645
KEGG:ath:AT1G52150 OMA:EHVASMA Genevestigator:B3H4G8 Uniprot:B3H4G8
Length = 837
Score = 168 (64.2 bits), Expect = 9.1e-19, Sum P(3) = 9.1e-19
Identities = 84/342 (24%), Positives = 142/342 (41%)
Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNH 347
L+ +A+ +++ GTA + ++ P IG C A+R +V +
Sbjct: 158 LLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEP 217
Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
+ EI+ D W +EV++ N G ++++ + P+ L P R+
Sbjct: 218 TRVAEIVKDRPSW-------FRECRAVEVMNVLPTAN-GGTVELLYMQLYAPTTLAPPRD 269
Query: 408 SYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVT 460
+ +RY +G+ V + SL + + P+ VR SG LI+ G S +
Sbjct: 270 FWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAEMLSSGYLIRPCDGGGSIIH 329
Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLAS-VMATNIPTGEVGVIT 519
V+H++++ V + + L + K +A L RQ +++A V TN G
Sbjct: 330 IVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAAL-RQLKQIAQEVTQTNSSVNGWG--- 385
Query: 520 NQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDD------- 571
R + L+ L++R+ F V+ T W+ + G DDV + S D
Sbjct: 386 ---RRPAALRALSQRLSRGFNEAVNGFTDEGWSVI-GDSMDDVTITVNSSPDKLMGLNLT 441
Query: 572 --PGRPP--GIVLSAATSFWLP-VPPKRVFDFLRDENTRSEW 608
G P +VL A S L VPP + FLR+ RSEW
Sbjct: 442 FANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREH--RSEW 481
Score = 144 (55.7 bits), Expect = 9.1e-19, Sum P(3) = 9.1e-19
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 93 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
+Y R+T Q++ +E + +CP P +R++L RE +EP Q+K WFQN+R + K
Sbjct: 17 KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
Query: 149 HERHENTQLRTENEKLRADN 168
+R E ++L+ N KL A N
Sbjct: 75 -QRKEASRLQAVNRKLTAMN 93
Score = 54 (24.1 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 23/87 (26%), Positives = 38/87 (43%)
Query: 117 DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALS 176
+KQRKE SR L+ + K NK EN +L+ + +L +N +R+
Sbjct: 73 EKQRKEASR---LQAVNRKLTAMNKLLM-------EENDRLQKQVSQLVHENSYFRQHTP 122
Query: 177 NASCPNCGGPTAIGEMSFDEHHLRLEN 203
N S P + ++ +H L +N
Sbjct: 123 NPSLP-AKDTSCESVVTSGQHQLASQN 148
Score = 48 (22.0 bits), Expect = 9.1e-19, Sum P(3) = 9.1e-19
Identities = 30/101 (29%), Positives = 41/101 (40%)
Query: 662 TASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTV 721
T + +I+AP+D D LLPSGF I+P L A E +S L +
Sbjct: 561 TCAELIFAPID---------ASFADDAPLLPSGFRIIP----LDSAK-QEVSSPNRTLDL 606
Query: 722 AFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
A + + S T K S N+ A +V I ES
Sbjct: 607 ASALEIGSAGT-KASTDQSG--NSTCARSVMTIAFEFGIES 644
Score = 45 (20.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 277 PMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAA--VLNEDE 316
P I++ A ++ I ++ MG P+ S + A VLNE+E
Sbjct: 784 PQIMQQGFACLQGGICLSSMGRPV---SYERAVAWKVLNEEE 822
Score = 40 (19.1 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 519 TNQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSG 555
+N DG +S+LK L C + A T+ +G
Sbjct: 714 SNSDGNESILKNLWHHTDAIICCSMKALPVFTFANQAG 751
>TAIR|locus:2116442 [details] [associations]
symbol:AT4G26920 "AT4G26920" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR002913 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161566 GO:GO:0003677 Pfam:PF01852
PROSITE:PS50848 HOGENOM:HOG000147055 IPI:IPI00519973 PIR:D85312
RefSeq:NP_194422.1 UniGene:At.54524 ProteinModelPortal:Q9M0J8
STRING:Q9M0J8 PaxDb:Q9M0J8 PRIDE:Q9M0J8 EnsemblPlants:AT4G26920.1
GeneID:828799 KEGG:ath:AT4G26920 TAIR:At4g26920 eggNOG:NOG311290
OMA:WIIADIS PhylomeDB:Q9M0J8 ArrayExpress:Q9M0J8
Genevestigator:Q9M0J8 Uniprot:Q9M0J8
Length = 461
Score = 168 (64.2 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 79/299 (26%), Positives = 131/299 (43%)
Query: 287 MEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMN 346
+ E+I +A + PLW S LNE Y R FP P F EASR + V+ ++
Sbjct: 72 VNEIIALATLESPLWRRSQREEMLTLNE-YYSRFFPWYAKNVPR-FVHEASRASEVIHVD 129
Query: 347 HISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEF-QVPSPLVPT 405
L+ L + +W T+F +V +++E + V ++ EF + +P++PT
Sbjct: 130 ASWLLTKLKNPMRWVTIFPSLVGN-VSIESSNDDVR-------MIIDMEFLTLITPVIPT 181
Query: 406 RESYYVRYCKQHGEGTWAVVDVSL------DNLRPSPAVRCRRRPSGCLIQEMPNGYSKV 459
R+ +RYC + TW + D+S+ D+LRP R PSG +I+ + + +V
Sbjct: 182 RKVKVLRYCHRIANDTWIIADISMYLSSYSDDLRPE----FLRFPSGFIIKHVARIF-RV 236
Query: 460 TWVEHVEVDDRGVHNLY---KQLV-----STGNAFGAK-RWVATLDRQCERLASVMATNI 510
T + G +NL K+LV T G + RW+ R R++S+ + ++
Sbjct: 237 T-------NSAGKNNLLQASKRLVHIFCSGTCGVIGNRGRWLGAGRRFDVRVSSLESRDM 289
Query: 511 PTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSV 569
G+I+ K K ++ GV H LSG V +TR +
Sbjct: 290 IRHPYGIISASGLTKIHAK--PEILFPLIYGVKKLEIHNHLRLSGNDLKQVLRITRDDI 346
Score = 156 (60.0 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 60/225 (26%), Positives = 110/225 (48%)
Query: 518 ITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPG 577
+TN G+ ++L+ ++R+V FC+G + L DVRV + +S D P G
Sbjct: 236 VTNSAGKNNLLQASKRLVHIFCSGTCGVIGNRGRWLGAGRRFDVRVSSLESRDMIRHPYG 295
Query: 578 IVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILS-NGGVVQEMAHIANGRDTG-NCVSL 635
I+ SA+ + P+ +F + + L +G ++++ I T N VSL
Sbjct: 296 II-SASGLTKIHAKPEILFPLIYGVKKLEIHNHLRLSGNDLKQVLRITRDDITSRNDVSL 354
Query: 636 L--RVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPS 693
R+N NS++ + +LQE+ + ++S VI++ +D+ ++ ++NG D Y P
Sbjct: 355 FSFRLN-----NSTE--VFLLQEAYNEASSSMVIHSILDVSSLAKIING-DRSYSFTYPC 406
Query: 694 GFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLG 738
GF I+P G + + G S G LT+A + +V + + + G
Sbjct: 407 GFTIMP-GQNSGDEDAGCVVSVG-FLTIATEEIVANTLVSDVERG 449
>UNIPROTKB|H0YLI9 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:BX004827
HGNC:HGNC:10853 ProteinModelPortal:H0YLI9 SMR:H0YLI9
Ensembl:ENST00000558872 Bgee:H0YLI9 Uniprot:H0YLI9
Length = 225
Score = 149 (57.5 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 39/132 (29%), Positives = 68/132 (51%)
Query: 38 NMMEGQLH-PLDMTQNTSESEIARLREEEFDSTKSG----SENHEGASGDDQEQRPNKKK 92
++ EG H P+ + ++ +++ +L+E G E E +D++ + K+
Sbjct: 58 DITEGGGHCPVHLFKDHVDNDKEKLKEFGTARVAEGIYECKEKREDVKSEDEDGQTKLKQ 117
Query: 93 RYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ-H 149
R R T Q+ E+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q +
Sbjct: 118 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQEN 177
Query: 150 ERHENTQLRTEN 161
+ H+ L T N
Sbjct: 178 QMHKGVILGTAN 189
>UNIPROTKB|H0YMR3 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:BX004827
HGNC:HGNC:10853 ProteinModelPortal:H0YMR3 SMR:H0YMR3
Ensembl:ENST00000560001 Bgee:H0YMR3 Uniprot:H0YMR3
Length = 279
Score = 149 (57.5 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 39/132 (29%), Positives = 68/132 (51%)
Query: 38 NMMEGQLH-PLDMTQNTSESEIARLREEEFDSTKSG----SENHEGASGDDQEQRPNKKK 92
++ EG H P+ + ++ +++ +L+E G E E +D++ + K+
Sbjct: 58 DITEGGGHCPVHLFKDHVDNDKEKLKEFGTARVAEGIYECKEKREDVKSEDEDGQTKLKQ 117
Query: 93 RYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ-H 149
R R T Q+ E+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q +
Sbjct: 118 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQEN 177
Query: 150 ERHENTQLRTEN 161
+ H+ L T N
Sbjct: 178 QMHKGVILGTAN 189
Score = 43 (20.2 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 385 YNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEG 420
+ G LQ+ T P P V T S + YC+Q G
Sbjct: 225 FQGLLQMKTNHTPFPKPTVFTFLS--LCYCRQAVRG 258
>UNIPROTKB|H0YJ32 [details] [associations]
symbol:SHOX2 "Short stature homeobox protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 HGNC:HGNC:10854
EMBL:AC112502 Ensembl:ENST00000555977 Uniprot:H0YJ32
Length = 178
Score = 133 (51.9 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 74 ENHEGASG-DDQEQRPNKKKRYHRH-TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
+ E A G +D+ Q K++R + T Q+ E+E F E +PD R+ELS+ LGL
Sbjct: 26 DRKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 85
Query: 132 LQVKFWFQNKRTQMKTQHER 151
+V+ WFQN+R + + Q +
Sbjct: 86 ARVQVWFQNRRAKCRKQENQ 105
>UNIPROTKB|E1C121 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 UniGene:Gga.962
CTD:5307 KO:K09356 GeneTree:ENSGT00700000104438 EMBL:AADN02028369
IPI:IPI00971376 RefSeq:NP_001161156.1 RefSeq:NP_001161157.1
RefSeq:NP_001161158.1 Ensembl:ENSGALT00000009427 GeneID:374201
KEGG:gga:374201 NextBio:20813705 Uniprot:E1C121
Length = 302
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 40/131 (30%), Positives = 72/131 (54%)
Query: 35 QPTNMMEGQLH------PLDMTQNT-SESEIARLREEEFDSTKSGSE-NHEGASGDDQEQ 86
QP++ M H P D +N+ SES + E+E +SG + N +GA+ D ++
Sbjct: 20 QPSHDMASSFHLQRSSEPRDPIENSASESSDTEVPEKE----RSGEQKNEDGAADDPAKK 75
Query: 87 RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
+ +++R H T Q+QE+EA F+ +PD R+E++ L +V+ WF+N+R + +
Sbjct: 76 KKQRRQRTH-FTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWR 134
Query: 147 TQHERHENTQL 157
+ ER++ L
Sbjct: 135 -KRERNQQMDL 144
>TAIR|locus:2154724 [details] [associations]
symbol:HB52 "homeobox protein 52" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
to blue light" evidence=IEP] [GO:0009646 "response to absence of
light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
Uniprot:Q9FN29
Length = 156
Score = 131 (51.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 31/89 (34%), Positives = 49/89 (55%)
Query: 82 DDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 141
+ Q Q NKKKR TQ Q++++E F + + +LS +LGL QV WFQNK
Sbjct: 3 NSQSQGKNKKKRL---TQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNK 59
Query: 142 RTQMKTQHERHENTQLRTENEKLRADNMR 170
R + KTQ ++ L++++E +D +
Sbjct: 60 RARFKTQSLEVQHCTLQSKHEAALSDKAK 88
>UNIPROTKB|O15266 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0001501 "skeletal system development" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0001501 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
Orphanet:137693 eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331
OrthoDB:EOG41C6X2 EMBL:Y11536 EMBL:Y11535 EMBL:U82668 EMBL:U89331
EMBL:BX004827 IPI:IPI00005744 IPI:IPI00411417 RefSeq:NP_000442.1
RefSeq:NP_006874.1 UniGene:Hs.105932 ProteinModelPortal:O15266
SMR:O15266 IntAct:O15266 STRING:O15266 PhosphoSite:O15266
PRIDE:O15266 DNASU:6473 Ensembl:ENST00000334060
Ensembl:ENST00000381575 Ensembl:ENST00000381578
Ensembl:ENST00000554971 GeneID:6473 KEGG:hsa:6473 UCSC:uc004cph.1
UCSC:uc004cpi.3 CTD:6473 GeneCards:GC0XP000585 HGNC:HGNC:10853
MIM:127300 MIM:249700 MIM:300582 MIM:312865 MIM:400020
neXtProt:NX_O15266 Orphanet:2632 Orphanet:240 PharmGKB:PA134978644
InParanoid:O15266 OMA:SNHCPVH PhylomeDB:O15266 GenomeRNAi:6473
NextBio:25145 Bgee:O15266 CleanEx:HS_SHOX Genevestigator:O15266
Uniprot:O15266
Length = 292
Score = 149 (57.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 39/132 (29%), Positives = 68/132 (51%)
Query: 38 NMMEGQLH-PLDMTQNTSESEIARLREEEFDSTKSG----SENHEGASGDDQEQRPNKKK 92
++ EG H P+ + ++ +++ +L+E G E E +D++ + K+
Sbjct: 58 DITEGGGHCPVHLFKDHVDNDKEKLKEFGTARVAEGIYECKEKREDVKSEDEDGQTKLKQ 117
Query: 93 RYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ-H 149
R R T Q+ E+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q +
Sbjct: 118 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQEN 177
Query: 150 ERHENTQLRTEN 161
+ H+ L T N
Sbjct: 178 QMHKGVILGTAN 189
>UNIPROTKB|F1NFE6 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=IEA] [GO:0002063
"chondrocyte development" evidence=IEA] [GO:0003170 "heart valve
development" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA] [GO:2000172 "regulation of branching morphogenesis of
a nerve" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0032330
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0048743
GO:GO:0045880 GO:GO:2000172 EMBL:AADN02017635 EMBL:AADN02017636
EMBL:AADN02017637 EMBL:AADN02017638 IPI:IPI00577004
Ensembl:ENSGALT00000026949 OMA:ARVQXVQ Uniprot:F1NFE6
Length = 221
Score = 143 (55.4 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 38/122 (31%), Positives = 63/122 (51%)
Query: 46 PLDMTQNTSESEIARLREEEFDSTKSG----SENHEGASGDDQEQRPNKKKRYHR--HTQ 99
PL + ++ ES+ +++E T G E E +D++ + K+R R T
Sbjct: 1 PLHLFKDHVESDKDKMKEFAAGRTAEGIYECKEKREDVKSEDEDGQTKLKQRRSRTNFTL 60
Query: 100 HQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVK-FWFQNKRTQMKTQ-HERHENTQL 157
Q+ E+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q ++ H+ L
Sbjct: 61 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQQVWFQNRRAKCRKQENQMHKGVIL 120
Query: 158 RT 159
T
Sbjct: 121 GT 122
>UNIPROTKB|E1C1I8 [details] [associations]
symbol:LOC100858967 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104263 EMBL:AADN02000990 EMBL:AADN02000991
EMBL:AADN02000992 EMBL:AADN02000993 IPI:IPI00818363
Ensembl:ENSGALT00000037817 ArrayExpress:E1C1I8 Uniprot:E1C1I8
Length = 203
Score = 140 (54.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 39/105 (37%), Positives = 56/105 (53%)
Query: 60 RLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQ 119
R R E S +S S N+E SG QR KK+ +T++QI+E+E F + + ++
Sbjct: 103 RPRPESGSSPESSSGNNEEKSGSSSGQRTRKKRC--PYTKYQIRELEREFFFSVYINKEK 160
Query: 120 RKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
R +LSR L L QVK WFQN+R MK + + Q + N L
Sbjct: 161 RLQLSRMLNLTDRQVKIWFQNRR--MKEKKINRDRLQYYSANPLL 203
>UNIPROTKB|D6RBG8 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231518 EMBL:AC017068 HGNC:HGNC:9005 ChiTaRS:PITX2
IPI:IPI00967695 ProteinModelPortal:D6RBG8 SMR:D6RBG8
Ensembl:ENST00000511990 ArrayExpress:D6RBG8 Bgee:D6RBG8
Uniprot:D6RBG8
Length = 118
Score = 129 (50.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 28/93 (30%), Positives = 53/93 (56%)
Query: 65 EFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELS 124
E D ++ G GA D +++ +++R H T Q+QE+EA F+ +PD R+E++
Sbjct: 16 EKDKSQQGKNEDVGAE-DPSKKKRQRRQRTH-FTSQQLQELEATFQRNRYPDMSTREEIA 73
Query: 125 RELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
L +V+ WF+N+R + + + ER++ +L
Sbjct: 74 VWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 105
>RGD|2320224 [details] [associations]
symbol:LOC100364841 "rCG53272-like" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:2320224 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00530000063899
IPI:IPI00959398 Ensembl:ENSRNOT00000035489 Uniprot:F1M524
Length = 96
Score = 129 (50.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 89 NKKKRYHRH--------TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
++++R+ RH TQ Q++EME F+E P+PD R EL+R L + ++VK WF N
Sbjct: 3 SRRRRHRRHRRSSPYLFTQWQVEEMENLFEETPYPDVLTRGELARTLNVPEVKVKVWFSN 62
Query: 141 KRTQMKTQHER 151
+R + + R
Sbjct: 63 RRAKQRKNERR 73
>TAIR|locus:2041283 [details] [associations]
symbol:HB6 "homeobox protein 6" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=TAS] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009269 "response to desiccation"
evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009738 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009788
EMBL:AC006592 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2685900 EMBL:X67034 EMBL:AY060569 EMBL:AY063819
EMBL:AY094457 EMBL:AY122903 EMBL:AF104900 IPI:IPI00548532
PIR:E84612 PIR:S47136 RefSeq:NP_565536.1 UniGene:At.25257
ProteinModelPortal:P46668 SMR:P46668 STRING:P46668
EnsemblPlants:AT2G22430.1 GeneID:816775 KEGG:ath:AT2G22430
GeneFarm:3962 TAIR:At2g22430 eggNOG:NOG255500 InParanoid:P46668
OMA:ESDISVK PhylomeDB:P46668 Genevestigator:P46668
GermOnline:AT2G22430 Uniprot:P46668
Length = 311
Score = 145 (56.1 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 45/133 (33%), Positives = 72/133 (54%)
Query: 42 GQLHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRP-NKKKRYHRHTQH 100
G L L T +T E R EF S G E E A +++ ++KKR R + +
Sbjct: 12 GGLISLCPTTSTDEQSPRRYGGREFQSMLEGYEEEEEAIVEERGHVGLSEKKR--RLSIN 69
Query: 101 QIQEMEAFFKECPHPDDKQRK-ELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRT 159
Q++ +E F E + + +RK +L++ELGL+P QV WFQN+R + KT+ + L+T
Sbjct: 70 QVKALEKNF-ELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKT 128
Query: 160 ENEKLRA--DNMR 170
+ + LR D++R
Sbjct: 129 QYDSLRHNFDSLR 141
Score = 41 (19.5 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 643 SANSSQSNMLILQESCTDPTASFVIYAP 670
S++SS S+ L+ +ES ++ T + + P
Sbjct: 237 SSDSSDSSALLNEESSSNVTVAAPVTVP 264
Score = 39 (18.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 590 VPPKRVFDFLRDENTRSEWDILS 612
VP F F++ E T D LS
Sbjct: 263 VPGGNFFQFVKMEQTEDHEDFLS 285
>UNIPROTKB|F1Q361 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 OMA:SNHCPVH
EMBL:AAEX03026084 Ensembl:ENSCAFT00000017459 Uniprot:F1Q361
Length = 291
Score = 143 (55.4 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 38/130 (29%), Positives = 66/130 (50%)
Query: 38 NMMEGQLH-PLDMTQNTSESEIARLREEEFDSTKSG----SENHEGASGDDQEQRPNKKK 92
++ E H P+ + ++ +S+ +L+E G E E +D++ + K+
Sbjct: 57 DITESSGHCPVHLFKDHVDSDKDKLKEFGTGRAAEGVYECKEKREDVKSEDEDGQTKLKQ 116
Query: 93 RYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ-H 149
R R T Q+ E+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q +
Sbjct: 117 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQEN 176
Query: 150 ERHENTQLRT 159
+ H+ L T
Sbjct: 177 QMHKGVILGT 186
>UNIPROTKB|K7GS77 [details] [associations]
symbol:LOC100520816 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
EMBL:FP015869 GeneID:100520816 RefSeq:XP_003134962.1
Ensembl:ENSSSCT00000035048 Uniprot:K7GS77
Length = 292
Score = 143 (55.4 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 37/130 (28%), Positives = 67/130 (51%)
Query: 38 NMMEGQLH-PLDMTQNTSESEIARLREEEFDSTKSG----SENHEGASGDDQEQRPNKKK 92
++ EG H P+ + ++ +++ +L+E G + E +D++ + K+
Sbjct: 58 DITEGSGHCPVHLFKDHVDNDKDKLKEFGTGRAAEGIYDCKDKREDVKSEDEDGQTKLKQ 117
Query: 93 RYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ-H 149
R R T Q+ E+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q +
Sbjct: 118 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQEN 177
Query: 150 ERHENTQLRT 159
+ H+ L T
Sbjct: 178 QMHKGVILGT 187
>ZFIN|ZDB-GENE-990415-236 [details] [associations]
symbol:rx1 "retinal homeobox gene 1" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0010842 "retina layer formation" evidence=IMP]
[GO:0003407 "neural retina development" evidence=IMP] [GO:0060219
"camera-type eye photoreceptor cell differentiation"
evidence=IGI;IMP] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-236 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010842
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104256 GO:GO:0060219 HOVERGEN:HBG021349
KO:K09332 EMBL:CR936300 OMA:MVDDSCL EMBL:BC060890 IPI:IPI00481573
RefSeq:NP_571300.2 UniGene:Dr.75761 SMR:Q6P984 STRING:Q6P984
Ensembl:ENSDART00000106166 GeneID:30472 KEGG:dre:30472 CTD:30472
InParanoid:Q6P984 NextBio:20806865 Uniprot:Q6P984
Length = 330
Score = 144 (55.7 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 34/113 (30%), Positives = 64/113 (56%)
Query: 45 HPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR--HTQHQI 102
H DM N + ++ LR+ + +S S++ + A G+ +P KK R +R T +Q+
Sbjct: 98 HDADMFSNKCDGDLGDLRK----AIESDSKSPDSADGE----QPKKKHRRNRTTFTTYQL 149
Query: 103 QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENT 155
E+E F++ +PD R+EL+ ++ L ++V+ WFQN+R + + Q + +T
Sbjct: 150 HELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKIDAST 202
>UNIPROTKB|F1SG33 [details] [associations]
symbol:LOC100520816 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 OMA:SNHCPVH
EMBL:FP015869 RefSeq:XP_003134961.1 Ensembl:ENSSSCT00000013224
GeneID:100520816 KEGG:ssc:100520816 Uniprot:F1SG33
Length = 300
Score = 143 (55.4 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 37/130 (28%), Positives = 67/130 (51%)
Query: 38 NMMEGQLH-PLDMTQNTSESEIARLREEEFDSTKSG----SENHEGASGDDQEQRPNKKK 92
++ EG H P+ + ++ +++ +L+E G + E +D++ + K+
Sbjct: 58 DITEGSGHCPVHLFKDHVDNDKDKLKEFGTGRAAEGIYDCKDKREDVKSEDEDGQTKLKQ 117
Query: 93 RYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ-H 149
R R T Q+ E+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q +
Sbjct: 118 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQEN 177
Query: 150 ERHENTQLRT 159
+ H+ L T
Sbjct: 178 QMHKGVILGT 187
>ZFIN|ZDB-GENE-051030-21 [details] [associations]
symbol:shox "short stature homeobox" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-051030-21 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104279 EMBL:BX294669 IPI:IPI00742503
Ensembl:ENSDART00000029238 ArrayExpress:F1Q5T6 Bgee:F1Q5T6
Uniprot:F1Q5T6
Length = 304
Score = 143 (55.4 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 36/121 (29%), Positives = 60/121 (49%)
Query: 46 PLDMTQNTSESEIARLREEEFDSTKSG----SENHEGASGDDQEQRPNKKKRYHR--HTQ 99
P+ + + E E +L+E G + E +D++ + K+R R T
Sbjct: 59 PVHLYKEHVELEKEKLKEFSVTRASDGIYDCKDKKEDVKSEDEDAQSKLKQRRSRTNFTL 118
Query: 100 HQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ-HERHENTQLR 158
Q+ E+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q ++ H+ L
Sbjct: 119 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILG 178
Query: 159 T 159
T
Sbjct: 179 T 179
>WB|WBGene00000439 [details] [associations]
symbol:ceh-16 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0009957 "epidermal cell fate specification" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0045026 "plasma membrane fusion" evidence=IGI;IMP] [GO:0048859
"formation of anatomical boundary" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
GO:GO:0043565 GO:GO:0045944 GO:GO:0040011 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0040015 GO:GO:0000976 GO:GO:0010172
GO:GO:0009957 GO:GO:0048859 GeneTree:ENSGT00680000099870
EMBL:AY647457 EMBL:FO080380 PIR:S44752 PIR:T15488
RefSeq:NP_498898.2 UniGene:Cel.25260 ProteinModelPortal:P34326
SMR:P34326 STRING:P34326 EnsemblMetazoa:C13G5.1.1
EnsemblMetazoa:C13G5.1.2 GeneID:191618 KEGG:cel:CELE_C13G5.1
UCSC:C13G5.1 CTD:191618 WormBase:C13G5.1 eggNOG:NOG306728
HOGENOM:HOG000022417 InParanoid:P34326 OMA:PTFASPN NextBio:949698
GO:GO:0045026 PROSITE:PS00033 Uniprot:P34326
Length = 187
Score = 132 (51.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 70 KSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGL 129
KS G+SG +E+ K+ R T Q+ ++ F+E + +K+R+EL+ ELGL
Sbjct: 71 KSRKRESTGSSGSSEEE---KRPRT-AFTGDQLDRLKTEFRESRYLTEKRRQELAHELGL 126
Query: 130 EPLQVKFWFQNKRTQMK 146
Q+K WFQNKR ++K
Sbjct: 127 NESQIKIWFQNKRAKLK 143
>UNIPROTKB|Q8N693 [details] [associations]
symbol:ESX1 "Homeobox protein ESX1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0051726
"regulation of cell cycle" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043565 GO:GO:0003700 GO:GO:0006357
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051726
EMBL:CH471120 GO:GO:0060716 InterPro:IPR013847 PRINTS:PR00028
GO:GO:0060713 EMBL:AY114148 EMBL:AL049631 EMBL:BC042633
EMBL:BC053599 IPI:IPI00166966 RefSeq:NP_703149.1 UniGene:Hs.223782
ProteinModelPortal:Q8N693 SMR:Q8N693 IntAct:Q8N693 STRING:Q8N693
PhosphoSite:Q8N693 DMDM:116241356 PRIDE:Q8N693
Ensembl:ENST00000372588 GeneID:80712 KEGG:hsa:80712 UCSC:uc004ely.3
CTD:80712 GeneCards:GC0XM103494 HGNC:HGNC:14865 HPA:HPA051992
MIM:300154 neXtProt:NX_Q8N693 PharmGKB:PA27892 eggNOG:NOG264325
HOGENOM:HOG000198273 HOVERGEN:HBG084082 InParanoid:Q8N693
OMA:MAPVPPW OrthoDB:EOG4MKNHC PhylomeDB:Q8N693 GenomeRNAi:80712
NextBio:71013 ArrayExpress:Q8N693 Bgee:Q8N693 CleanEx:HS_ESX1
Genevestigator:Q8N693 GermOnline:ENSG00000123576 Uniprot:Q8N693
Length = 406
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 33/91 (36%), Positives = 50/91 (54%)
Query: 57 EIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR-HTQHQIQEMEAFFKECPHP 115
E+ + +EE +T G + EG + Q P +K+R TQ Q+QE+E FF E +P
Sbjct: 105 ELKQEQEEPPQTTVEGPQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYP 164
Query: 116 DDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
D R+ L+ L L +V+ WFQN+R + K
Sbjct: 165 DVVARERLAARLNLTEDRVQVWFQNRRAKWK 195
>UNIPROTKB|G1K364 [details] [associations]
symbol:LOC100858967 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007501 "mesodermal cell
fate specification" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0032993
"protein-DNA complex" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
UniGene:Gga.957 OMA:GGCRETA NextBio:20815412 InterPro:IPR021918
Pfam:PF12045 GeneTree:ENSGT00700000104263 EMBL:AADN02000990
EMBL:AADN02000991 EMBL:AADN02000992 EMBL:AADN02000993
Ensembl:ENSGALT00000037819 Uniprot:G1K364
Length = 296
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 39/105 (37%), Positives = 56/105 (53%)
Query: 60 RLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQ 119
R R E S +S S N+E SG QR KK+ +T++QI+E+E F + + ++
Sbjct: 196 RRRPESGSSPESSSGNNEEKSGSSSGQRTRKKRC--PYTKYQIRELEREFFFSVYINKEK 253
Query: 120 RKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
R +LSR L L QVK WFQN+R MK + + Q + N L
Sbjct: 254 RLQLSRMLNLTDRQVKIWFQNRR--MKEKKINRDRLQYYSANPLL 296
>UNIPROTKB|P31258 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007501 "mesodermal cell
fate specification" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0032993
"protein-DNA complex" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0032332 GO:GO:0048589 GO:GO:0032993
GO:GO:0001759 EMBL:M81250 IPI:IPI00585648 RefSeq:NP_989950.1
RefSeq:XP_003640756.1 RefSeq:XP_003640763.1 UniGene:Gga.957
ProteinModelPortal:P31258 SMR:P31258 STRING:P31258 GeneID:100858967
GeneID:100859078 GeneID:395327 KEGG:gga:100858967
KEGG:gga:100859078 KEGG:gga:395327 CTD:3207 eggNOG:NOG274734
HOGENOM:HOG000231898 HOVERGEN:HBG052048 InParanoid:P31258 KO:K09296
OMA:GGCRETA NextBio:20815412 ArrayExpress:P31258 GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 Uniprot:P31258
Length = 297
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 39/105 (37%), Positives = 56/105 (53%)
Query: 60 RLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQ 119
R R E S +S S N+E SG QR KK+ +T++QI+E+E F + + ++
Sbjct: 197 RRRPESGSSPESSSGNNEEKSGSSSGQRTRKKRC--PYTKYQIRELEREFFFSVYINKEK 254
Query: 120 RKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
R +LSR L L QVK WFQN+R MK + + Q + N L
Sbjct: 255 RLQLSRMLNLTDRQVKIWFQNRR--MKEKKINRDRLQYYSANPLL 297
>RGD|1563291 [details] [associations]
symbol:Rhox10 "reproductive homeobox 10" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 RGD:1563291 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
eggNOG:NOG257474 GeneTree:ENSGT00530000063899 EMBL:DQ058657
IPI:IPI00608182 RefSeq:NP_001032670.1 UniGene:Rn.144547
Ensembl:ENSRNOT00000061539 GeneID:652926 KEGG:rno:652926
UCSC:RGD:1563291 CTD:434769 HOGENOM:HOG000136396 HOVERGEN:HBG093019
InParanoid:Q4TU73 OrthoDB:EOG4T7859 NextBio:714867
Genevestigator:Q4TU73 Uniprot:Q4TU73
Length = 201
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 30/107 (28%), Positives = 56/107 (52%)
Query: 44 LHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQ 103
LH L ++ S E T++ E A+G + N++ ++H+ T Q+
Sbjct: 46 LHELGQDEHLSFKYKQNYSYETRKETQARPSEPEKAAGTAACRSNNRQIKHHKFTYAQLC 105
Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
E+E F+E +PD +RK L+ + ++ +VK WF+NKR + + +H+
Sbjct: 106 ELEKAFQETQYPDAHRRKALAALIHVDECKVKAWFKNKRAKYRKKHK 152
>RGD|620371 [details] [associations]
symbol:Rax "retina and anterior neural fold homeobox"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0021854 "hypothalamus development" evidence=ISO]
[GO:0043010 "camera-type eye development" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0060173 "limb
development" evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:620371 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062
KO:K09332 EMBL:AF320225 EMBL:AF320224 EMBL:AF135839 IPI:IPI00204057
IPI:IPI00760132 RefSeq:NP_446130.1 UniGene:Rn.87955
ProteinModelPortal:Q9JLT7 SMR:Q9JLT7 STRING:Q9JLT7 PRIDE:Q9JLT7
GeneID:114213 KEGG:rno:114213 UCSC:RGD:620371 InParanoid:Q9JLT7
NextBio:618425 ArrayExpress:Q9JLT7 Genevestigator:Q9JLT7
GermOnline:ENSRNOG00000016944 Uniprot:Q9JLT7
Length = 342
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 37/114 (32%), Positives = 67/114 (58%)
Query: 79 ASGD----DQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPL 132
A+GD ++E+ P KK R +R T +Q+ E+E F++ +PD R+EL+ ++ L +
Sbjct: 120 AAGDSKLSEEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEV 179
Query: 133 QVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGP 186
+V+ WFQN+R + + Q E+ E + ++ ++ L + + R S+A P GGP
Sbjct: 180 RVQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPLLSFS---RSPPSSALAP-LGGP 228
>UNIPROTKB|Q9JLT7 [details] [associations]
symbol:Rax "Retinal homeobox protein Rx" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:620371 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062
KO:K09332 EMBL:AF320225 EMBL:AF320224 EMBL:AF135839 IPI:IPI00204057
IPI:IPI00760132 RefSeq:NP_446130.1 UniGene:Rn.87955
ProteinModelPortal:Q9JLT7 SMR:Q9JLT7 STRING:Q9JLT7 PRIDE:Q9JLT7
GeneID:114213 KEGG:rno:114213 UCSC:RGD:620371 InParanoid:Q9JLT7
NextBio:618425 ArrayExpress:Q9JLT7 Genevestigator:Q9JLT7
GermOnline:ENSRNOG00000016944 Uniprot:Q9JLT7
Length = 342
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 37/114 (32%), Positives = 67/114 (58%)
Query: 79 ASGD----DQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPL 132
A+GD ++E+ P KK R +R T +Q+ E+E F++ +PD R+EL+ ++ L +
Sbjct: 120 AAGDSKLSEEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEV 179
Query: 133 QVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGP 186
+V+ WFQN+R + + Q E+ E + ++ ++ L + + R S+A P GGP
Sbjct: 180 RVQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPLLSFS---RSPPSSALAP-LGGP 228
>UNIPROTKB|F1RSD4 [details] [associations]
symbol:PRRX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104279
EMBL:CU138499 Ensembl:ENSSSCT00000006879 Uniprot:F1RSD4
Length = 141
Score = 120 (47.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 29/88 (32%), Positives = 49/88 (55%)
Query: 82 DDQ---EQRPNKKKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKF 136
DDQ E++ +K+R +R T Q+Q +E F+ +PD R++L+R + L +V+
Sbjct: 3 DDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQV 62
Query: 137 WFQNKRTQMKTQHERHENTQLRTENEKL 164
WFQN+R + + R+E L +N L
Sbjct: 63 WFQNRRAKFR----RNERAMLANKNASL 86
>UNIPROTKB|E1BXQ7 [details] [associations]
symbol:E1BXQ7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 EMBL:AADN02026343 EMBL:AADN02026344
EMBL:AADN02026345 IPI:IPI00684197 Ensembl:ENSGALT00000001693
Uniprot:E1BXQ7
Length = 395
Score = 141 (54.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 38/133 (28%), Positives = 70/133 (52%)
Query: 66 FDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQ---HQIQEMEAFFKECPHPDDKQRKE 122
+++ S +EN +G D +Q P+ +K T HQ++ M+++F +PD K K+
Sbjct: 229 YNAALSCNEN-DGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQ 287
Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL-RTENEKLRADNMRYREA-LSNASC 180
L+++ GL ++ WFQN R + + R ENT + +T + L+A + +SNAS
Sbjct: 288 LAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASM 347
Query: 181 PNCGGPTAIGEMS 193
PT + +++
Sbjct: 348 SPSSTPTTLTDLT 360
>MGI|MGI:109340 [details] [associations]
symbol:Pitx2 "paired-like homeodomain transcription factor 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=ISO] [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=ISO]
[GO:0000981 "sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=ISO] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=ISO] [GO:0001085 "RNA
polymerase II transcription factor binding" evidence=ISO]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=ISO] [GO:0001569
"patterning of blood vessels" evidence=IMP] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0002074 "extraocular skeletal muscle development"
evidence=IMP] [GO:0003171 "atrioventricular valve development"
evidence=IMP] [GO:0003253 "cardiac neural crest cell migration
involved in outflow tract morphogenesis" evidence=IMP] [GO:0003350
"pulmonary myocardium development" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IGI] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007368 "determination of left/right
symmetry" evidence=IMP] [GO:0007507 "heart development"
evidence=IGI;IMP] [GO:0007519 "skeletal muscle tissue development"
evidence=IMP] [GO:0007520 "myoblast fusion" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0009653 "anatomical structure morphogenesis" evidence=IMP]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IDA] [GO:0021763 "subthalamic
nucleus development" evidence=IMP] [GO:0021855 "hypothalamus cell
migration" evidence=IMP] [GO:0021983 "pituitary gland development"
evidence=IMP] [GO:0030324 "lung development" evidence=IMP]
[GO:0030334 "regulation of cell migration" evidence=IMP]
[GO:0031076 "embryonic camera-type eye development" evidence=IMP]
[GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IGI] [GO:0035886
"vascular smooth muscle cell differentiation" evidence=IMP]
[GO:0035993 "deltoid tuberosity development" evidence=ISO;IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0042476 "odontogenesis" evidence=ISO;IMP] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043010 "camera-type
eye development" evidence=ISO] [GO:0043388 "positive regulation of
DNA binding" evidence=IDA] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IMP]
[GO:0048738 "cardiac muscle tissue development" evidence=IMP]
[GO:0051219 "phosphoprotein binding" evidence=ISO] [GO:0055007
"cardiac muscle cell differentiation" evidence=IMP] [GO:0055009
"atrial cardiac muscle tissue morphogenesis" evidence=IMP]
[GO:0055015 "ventricular cardiac muscle cell development"
evidence=IMP] [GO:0055123 "digestive system development"
evidence=IMP] [GO:0060412 "ventricular septum morphogenesis"
evidence=IMP] [GO:0060460 "left lung morphogenesis" evidence=IMP]
[GO:0060577 "pulmonary vein morphogenesis" evidence=IMP]
[GO:0060578 "superior vena cava morphogenesis" evidence=IMP]
[GO:0061031 "endodermal digestive tract morphogenesis"
evidence=IMP] [GO:0061072 "iris morphogenesis" evidence=ISO]
[GO:0061325 "cell proliferation involved in outflow tract
morphogenesis" evidence=IMP] [GO:0070986 "left/right axis
specification" evidence=IMP] [GO:2000288 "positive regulation of
myoblast proliferation" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:109340 GO:GO:0005634 GO:GO:0005737
GO:GO:0001764 GO:GO:0016055 GO:GO:0001078 GO:GO:0043565
GO:GO:0001701 GO:GO:0045944 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0030334 GO:GO:0000981 GO:GO:0007368
GO:GO:0001569 GO:GO:0007520 GO:GO:0048536 GO:GO:0001570
GO:GO:0035116 GO:GO:0070986 GO:GO:0031076 GO:GO:0021983
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GO:GO:0042476 GO:GO:0001105 GO:GO:0031490 GO:GO:0055015
GO:GO:0001191 GO:GO:0055009 GO:GO:0035993 GO:GO:0043388
GO:GO:0002074 GO:GO:0060460 GO:GO:0060412 GO:GO:0048557
GO:GO:0061031 GO:GO:0021855 GO:GO:0003253 GO:GO:0061325
GO:GO:0003171 GO:GO:0061072 GO:GO:2000288 GO:GO:0003350
eggNOG:NOG249113 HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438
CTD:5308 KO:K04686 OMA:DMYPSYT OrthoDB:EOG4W9J4N GO:GO:0060577
GO:GO:0021763 GO:GO:0060578 GO:GO:0035886 EMBL:U80036 EMBL:U80010
EMBL:U80011 EMBL:AB006320 EMBL:AB006321 EMBL:AF048723 EMBL:AF048724
EMBL:AJ243597 EMBL:AF201091 EMBL:U70132 IPI:IPI00125578
IPI:IPI00230555 IPI:IPI00230556 IPI:IPI00885427 IPI:IPI00885862
RefSeq:NP_001035967.1 RefSeq:NP_001035969.1 RefSeq:NP_035228.2
UniGene:Mm.246804 ProteinModelPortal:P97474 SMR:P97474
IntAct:P97474 STRING:P97474 PRIDE:P97474 Ensembl:ENSMUST00000042587
Ensembl:ENSMUST00000106382 Ensembl:ENSMUST00000172645
Ensembl:ENSMUST00000174661 GeneID:18741 KEGG:mmu:18741
UCSC:uc008rhu.1 UCSC:uc008rhv.1 NextBio:294885 Bgee:P97474
CleanEx:MM_PITX2 Genevestigator:P97474
GermOnline:ENSMUSG00000028023 Uniprot:P97474
Length = 317
Score = 139 (54.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 32/114 (28%), Positives = 59/114 (51%)
Query: 48 DMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQH----QIQ 103
D ++ ES ++L + + +G + D + P+KKKR R H Q+Q
Sbjct: 39 DSPKSRKESASSKLFPRQHPGANEKDKGQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQ 98
Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
E+EA F+ +PD R+E++ L +V+ WF+N+R + + + ER++ +L
Sbjct: 99 ELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 151
>UNIPROTKB|F1P3H6 [details] [associations]
symbol:F1P3H6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007498 "mesoderm
development" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021978 "telencephalon
regionalization" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:2000678 "negative regulation of transcription regulatory region
DNA binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0008283 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 OMA:CNENDAE EMBL:AADN02026343
EMBL:AADN02026344 EMBL:AADN02026345 IPI:IPI00597964
Ensembl:ENSGALT00000034919 Uniprot:F1P3H6
Length = 413
Score = 141 (54.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 38/133 (28%), Positives = 70/133 (52%)
Query: 66 FDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQ---HQIQEMEAFFKECPHPDDKQRKE 122
+++ S +EN +G D +Q P+ +K T HQ++ M+++F +PD K K+
Sbjct: 247 YNAALSCNEN-DGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQ 305
Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL-RTENEKLRADNMRYREA-LSNASC 180
L+++ GL ++ WFQN R + + R ENT + +T + L+A + +SNAS
Sbjct: 306 LAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASM 365
Query: 181 PNCGGPTAIGEMS 193
PT + +++
Sbjct: 366 SPSSTPTTLTDLT 378
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 135 (52.6 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 33/90 (36%), Positives = 51/90 (56%)
Query: 77 EGASGDDQEQRPNKKKRYH-RHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVK 135
E +SG ++ KK R ++ QI+ +E F+ + +++ +++RELGL+P QV
Sbjct: 13 EISSGMTMNKKKMKKSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVA 72
Query: 136 FWFQNKRTQMKT-QHERHENTQLRTENEKL 164
WFQNKR + KT Q E+ NT LR L
Sbjct: 73 IWFQNKRARWKTKQLEKEYNT-LRANYNNL 101
>UNIPROTKB|P78337 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0014707 "branchiomeric skeletal
muscle development" evidence=IEA] [GO:0021983 "pituitary gland
development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0001501
"skeletal system development" evidence=TAS] [GO:0009653 "anatomical
structure morphogenesis" evidence=TAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0005730 EMBL:CH471062 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0001501 GO:GO:0051216
GO:GO:0035116 GO:GO:0021983 GO:GO:0009653 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000988 GO:GO:0048625
GO:GO:0014707 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 OrthoDB:EOG4R503Q EMBL:U70370 EMBL:AF009650
EMBL:AF009648 EMBL:AF009649 EMBL:AK290635 EMBL:AC004764
EMBL:AC008406 EMBL:BC009412 EMBL:BC003685 IPI:IPI00019182
RefSeq:NP_002644.4 UniGene:Hs.84136 ProteinModelPortal:P78337
SMR:P78337 IntAct:P78337 MINT:MINT-260914 STRING:P78337
PhosphoSite:P78337 DMDM:108935922 PaxDb:P78337 PeptideAtlas:P78337
PRIDE:P78337 DNASU:5307 Ensembl:ENST00000265340
Ensembl:ENST00000506438 GeneID:5307 KEGG:hsa:5307 UCSC:uc010jea.3
CTD:5307 GeneCards:GC05M134363 H-InvDB:HIX0005190 HGNC:HGNC:9004
HPA:HPA008743 MIM:119800 MIM:602149 neXtProt:NX_P78337
Orphanet:293144 Orphanet:293150 PharmGKB:PA33338 InParanoid:P78337
KO:K09356 OMA:CKNSYLP PhylomeDB:P78337 ChiTaRS:PITX1
GenomeRNAi:5307 NextBio:20514 ArrayExpress:P78337 Bgee:P78337
CleanEx:HS_PITX1 Genevestigator:P78337 GermOnline:ENSG00000069011
Uniprot:P78337
Length = 314
Score = 138 (53.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 36/118 (30%), Positives = 60/118 (50%)
Query: 46 PLDMTQNT-SESEIARLREEEFDSTKSGSENH----EGASGDDQEQRPNKKKRYHRH-TQ 99
P + +N+ SES L E+E G E+ G G D + K++R H T
Sbjct: 39 PREPLENSASESSDTELPEKERGGEPKGPEDSGAGGTGCGGADDPAKKKKQRRQRTHFTS 98
Query: 100 HQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
Q+QE+EA F+ +PD R+E++ L +V+ WF+N+R + + + ER++ L
Sbjct: 99 QQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWR-KRERNQQLDL 155
>RGD|3674 [details] [associations]
symbol:Shox2 "short stature homeobox 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA;ISO] [GO:0002053 "positive regulation of mesenchymal
cell proliferation" evidence=IEA;ISO] [GO:0002062 "chondrocyte
differentiation" evidence=ISO] [GO:0002063 "chondrocyte development"
evidence=IEA;ISO] [GO:0003170 "heart valve development"
evidence=IEA;ISO] [GO:0003209 "cardiac atrium morphogenesis"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA;ISO] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA;ISO] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=ISO] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IEA;ISO] [GO:0048598 "embryonic
morphogenesis" evidence=ISO] [GO:0048743 "positive regulation of
skeletal muscle fiber development" evidence=IEA;ISO] [GO:0050772
"positive regulation of axonogenesis" evidence=IEA;ISO] [GO:0060272
"embryonic skeletal joint morphogenesis" evidence=IEA;ISO]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA;ISO] [GO:0060415 "muscle tissue
morphogenesis" evidence=IEA;ISO] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3674
GO:GO:0005634 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326 GO:GO:0050772
GO:GO:0032330 GO:GO:0001649 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976 GO:GO:0060272
GO:GO:0002053 GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2
GO:GO:0003170 EMBL:AJ002258 EMBL:AJ002259 EMBL:AJ002260
IPI:IPI00231489 IPI:IPI00559825 RefSeq:NP_037160.1 UniGene:Rn.11258
ProteinModelPortal:O35750 SMR:O35750 STRING:O35750 GeneID:25546
KEGG:rno:25546 UCSC:RGD:3674 InParanoid:O35750 NextBio:607081
Genevestigator:O35750 GermOnline:ENSRNOG00000012478 Uniprot:O35750
Length = 237
Score = 134 (52.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 47 LDM--TQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQE 104
LDM + + E RL E K E+ +G + Q + ++ R + T Q+ E
Sbjct: 3 LDMGAAERSREPGSPRLTEVS-PELKDRKEDAKGMEDEGQTKIKQRRSRTN-FTLEQLNE 60
Query: 105 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q +
Sbjct: 61 LERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQ 107
>UNIPROTKB|O35750 [details] [associations]
symbol:Shox2 "Short stature homeobox protein 2"
species:10116 "Rattus norvegicus" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3674 GO:GO:0005634 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0030326 GO:GO:0050772 GO:GO:0032330 GO:GO:0001649
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2
GO:GO:0003170 EMBL:AJ002258 EMBL:AJ002259 EMBL:AJ002260
IPI:IPI00231489 IPI:IPI00559825 RefSeq:NP_037160.1 UniGene:Rn.11258
ProteinModelPortal:O35750 SMR:O35750 STRING:O35750 GeneID:25546
KEGG:rno:25546 UCSC:RGD:3674 InParanoid:O35750 NextBio:607081
Genevestigator:O35750 GermOnline:ENSRNOG00000012478 Uniprot:O35750
Length = 237
Score = 134 (52.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 47 LDM--TQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQE 104
LDM + + E RL E K E+ +G + Q + ++ R + T Q+ E
Sbjct: 3 LDMGAAERSREPGSPRLTEVS-PELKDRKEDAKGMEDEGQTKIKQRRSRTN-FTLEQLNE 60
Query: 105 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q +
Sbjct: 61 LERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQ 107
>FB|FBgn0020617 [details] [associations]
symbol:Rx "Retinal Homeobox" species:7227 "Drosophila
melanogaster" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0007420
"brain development" evidence=NAS] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AE013599 GO:GO:0005634 GO:GO:0022008 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG261733
GeneTree:ENSGT00700000104256 EMBL:AJ223300 EMBL:AY118390
RefSeq:NP_726006.2 UniGene:Dm.3064 ProteinModelPortal:Q9W2Q1
SMR:Q9W2Q1 STRING:Q9W2Q1 EnsemblMetazoa:FBtr0071518 GeneID:37367
KEGG:dme:Dmel_CG10052 CTD:37367 FlyBase:FBgn0020617
InParanoid:Q9W2Q1 OMA:MVEANQL OrthoDB:EOG43BK55 PhylomeDB:Q9W2Q1
GenomeRNAi:37367 NextBio:803298 Bgee:Q9W2Q1 GermOnline:CG10052
Uniprot:Q9W2Q1
Length = 873
Score = 144 (55.7 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 33/100 (33%), Positives = 58/100 (58%)
Query: 64 EEFDSTKSGSENHEGASG-DDQEQRPNKKKRYHRH-----TQHQIQEMEAFFKECPHPDD 117
E+ + T S + + SG DD+ Q N K+ HR T +Q+ E+E F++ +PD
Sbjct: 496 EDLNQTNSSEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 555
Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
R+EL+ ++ L ++V+ WFQN+R + + Q E+ E+ +L
Sbjct: 556 YSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKSESLRL 594
>UNIPROTKB|P56673 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
EMBL:AF069397 IPI:IPI00589641 UniGene:Gga.962
ProteinModelPortal:P56673 SMR:P56673 STRING:P56673 eggNOG:NOG249113
HOGENOM:HOG000273886 HOVERGEN:HBG068770 InParanoid:P56673
OrthoDB:EOG4R503Q Uniprot:P56673
Length = 311
Score = 137 (53.3 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 35 QPTNMMEGQLH------PLDMTQNT-SESEIARLREEE-FDSTKSGSENHEGASG----D 82
QP++ M H P D +N+ SES + E+E +S K+ + G++G
Sbjct: 20 QPSHDMASSFHLQRSSEPRDPIENSASESSDTDVPEKERSESRKTREDGGAGSAGCTGAA 79
Query: 83 DQEQRPNKKKRYHRH-TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 141
D + K++R H T Q+QE+EA F+ +PD R+E++ L +V+ WF+N+
Sbjct: 80 DDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNR 139
Query: 142 RTQMKTQHERHENTQL 157
R + + + ER++ L
Sbjct: 140 RAKWR-KRERNQQMDL 154
>UNIPROTKB|Q9PVY0 [details] [associations]
symbol:RX1 "Retinal homeobox protein Rx1" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 eggNOG:NOG261733 GeneTree:ENSGT00700000104256
HOVERGEN:HBG021349 OrthoDB:EOG4V4387 EMBL:AB015750 EMBL:AF420601
IPI:IPI00599352 RefSeq:NP_989435.2 UniGene:Gga.48437
UniGene:Gga.55791 ProteinModelPortal:Q9PVY0 SMR:Q9PVY0 PRIDE:Q9PVY0
Ensembl:ENSGALT00000032299 GeneID:373893 KEGG:gga:373893 CTD:30062
InParanoid:Q9PVY0 KO:K09332 NextBio:20813425 ArrayExpress:Q9PVY0
Uniprot:Q9PVY0
Length = 228
Score = 133 (51.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 35/122 (28%), Positives = 66/122 (54%)
Query: 49 MTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEME 106
M N E ++ LR+ SE A+ + E++P KK R +R T +Q+ E+E
Sbjct: 1 MFLNKCEGDLGELRKP------GDSEGTPPAAAE--EEQPKKKHRRNRTTFTTYQLHELE 52
Query: 107 AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRA 166
F++ +PD R+EL+ ++ L ++V+ WFQN+R + + Q E+ E + ++ + + +
Sbjct: 53 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKMEASSMKLHDTPMLS 111
Query: 167 DN 168
N
Sbjct: 112 FN 113
>UNIPROTKB|F1MU46 [details] [associations]
symbol:PITX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051216 "cartilage development" evidence=IEA]
[GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0021983 "pituitary gland
development" evidence=IEA] [GO:0014707 "branchiomeric skeletal
muscle development" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0051216 GO:GO:0035116 GO:GO:0021983 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000988 GO:GO:0048625
GO:GO:0014707 CTD:5307 KO:K09356 OMA:CKNSYLP
GeneTree:ENSGT00700000104438 EMBL:DAAA02020351 IPI:IPI01002575
RefSeq:NP_001192229.1 UniGene:Bt.11284 Ensembl:ENSBTAT00000006039
GeneID:508754 KEGG:bta:508754 NextBio:20868666 Uniprot:F1MU46
Length = 314
Score = 137 (53.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 37/118 (31%), Positives = 61/118 (51%)
Query: 46 PLDMTQNT-SESEIARLREEEFDSTKSGSENH-EGASGDDQEQRPNKKKRYHRHTQH--- 100
P + +N+ SES L E+E G E+ G +G + P KKK+ R H
Sbjct: 39 PREPLENSASESSDTELPEKERGGEPKGPEDSGAGGAGCGGAEDPAKKKKQRRQRTHFTS 98
Query: 101 -QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
Q+QE+EA F+ +PD R+E++ L +V+ WF+N+R + + + ER++ L
Sbjct: 99 QQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWR-KRERNQQLDL 155
>ZFIN|ZDB-GENE-990714-27 [details] [associations]
symbol:pitx2 "paired-like homeodomain transcription
factor 2" species:7955 "Danio rerio" [GO:0021501 "prechordal plate
formation" evidence=IGI] [GO:0060971 "embryonic heart tube
left/right pattern formation" evidence=IDA] [GO:0071907
"determination of digestive tract left/right asymmetry"
evidence=IDA] [GO:0048382 "mesendoderm development" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043114
"regulation of vascular permeability" evidence=IGI] [GO:0061386
"closure of optic fissure" evidence=IMP] [GO:0048593 "camera-type
eye morphogenesis" evidence=IMP] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IMP] [GO:0048384 "retinoic
acid receptor signaling pathway" evidence=IMP] [GO:0060325 "face
morphogenesis" evidence=IMP] [GO:0048596 "embryonic camera-type eye
morphogenesis" evidence=IMP] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990714-27 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048384
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0060325
GO:GO:0048382 GO:GO:0071907 GO:GO:0048703 GO:GO:0060971
GO:GO:0021501 GO:GO:0061386 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438 CTD:5308 KO:K04686
EMBL:AF156905 EMBL:AF156906 EMBL:AF181681 EMBL:AF132446
EMBL:AF132447 EMBL:BC092922 IPI:IPI00486280 IPI:IPI00507463
RefSeq:NP_571050.1 UniGene:Dr.81292 ProteinModelPortal:Q9W5Z2
SMR:Q9W5Z2 STRING:Q9W5Z2 Ensembl:ENSDART00000052569
Ensembl:ENSDART00000148319 GeneID:30164 KEGG:dre:30164
InParanoid:Q568C4 OMA:DMYPSYT NextBio:20806634 Bgee:Q9W5Z2
Uniprot:Q9W5Z2
Length = 314
Score = 137 (53.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 40/125 (32%), Positives = 63/125 (50%)
Query: 40 MEGQLHPLDMTQNTSESEIARLREEEFDSTKSGS--ENHEGAS-GDDQEQRPNKKKRYHR 96
M L PL Q + +S+ RL T S E +G S +D P+KKKR R
Sbjct: 29 MASSLQPL---QRSVDSK-HRLDVHTVSDTSSPESVEKEKGQSKNEDSNDDPSKKKRQRR 84
Query: 97 HTQH----QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERH 152
H Q+QE+EA F+ +PD R+E++ L +V+ WF+N+R + + + ER+
Sbjct: 85 QRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERN 143
Query: 153 ENTQL 157
+ +L
Sbjct: 144 QQAEL 148
>UNIPROTKB|F1S139 [details] [associations]
symbol:PITX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000288 "positive regulation of myoblast proliferation"
evidence=IEA] [GO:0070986 "left/right axis specification"
evidence=IEA] [GO:0061325 "cell proliferation involved in outflow
tract morphogenesis" evidence=IEA] [GO:0061072 "iris morphogenesis"
evidence=IEA] [GO:0061031 "endodermal digestive tract
morphogenesis" evidence=IEA] [GO:0060578 "superior vena cava
morphogenesis" evidence=IEA] [GO:0060577 "pulmonary vein
morphogenesis" evidence=IEA] [GO:0060460 "left lung morphogenesis"
evidence=IEA] [GO:0060412 "ventricular septum morphogenesis"
evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IEA] [GO:0055009 "atrial cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0051219 "phosphoprotein
binding" evidence=IEA] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0035993
"deltoid tuberosity development" evidence=IEA] [GO:0035886
"vascular smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0031076
"embryonic camera-type eye development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0021855 "hypothalamus cell
migration" evidence=IEA] [GO:0021763 "subthalamic nucleus
development" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0007520 "myoblast fusion" evidence=IEA]
[GO:0007368 "determination of left/right symmetry" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003350 "pulmonary myocardium
development" evidence=IEA] [GO:0003253 "cardiac neural crest cell
migration involved in outflow tract morphogenesis" evidence=IEA]
[GO:0003171 "atrioventricular valve development" evidence=IEA]
[GO:0002074 "extraocular skeletal muscle development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0001569 "patterning of blood vessels"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0001078 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in negative regulation of transcription"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0001764 GO:GO:0016055
GO:GO:0001078 GO:GO:0001701 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0030334 GO:GO:0007368 GO:GO:0001569
GO:GO:0007520 GO:GO:0001570 GO:GO:0035116 GO:GO:0031076
GO:GO:0021983 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GO:GO:0042476 GO:GO:0001105 GO:GO:0031490
GO:GO:0055015 GO:GO:0001191 GO:GO:0055009 GO:GO:0035993
GO:GO:0043388 GO:GO:0002074 GO:GO:0060460 GO:GO:0060412
GO:GO:0048557 GO:GO:0061031 GO:GO:0021855 GO:GO:0003253
GO:GO:0061325 GO:GO:0003171 GO:GO:0061072 GO:GO:2000288
GO:GO:0003350 GeneTree:ENSGT00700000104438 OMA:DMYPSYT
GO:GO:0060577 GO:GO:0021763 GO:GO:0060578 GO:GO:0035886
EMBL:CU463881 Ensembl:ENSSSCT00000009999 Uniprot:F1S139
Length = 326
Score = 137 (53.3 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 34/120 (28%), Positives = 64/120 (53%)
Query: 42 GQLHPLDMTQNTSE----SEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRH 97
GQ LD +++ E S+ + E D ++ G GA D +++ +++R H
Sbjct: 44 GQTRSLDSSKHRLEVHTISDTSSPEAAEKDKSQQGKNEDVGAE-DPSKKKRQRRQRTH-F 101
Query: 98 TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
T Q+QE+EA F+ +PD R+E++ L +V+ WF+N+R + + + ER++ +L
Sbjct: 102 TSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 160
>FB|FBgn0025334 [details] [associations]
symbol:PHDP "Putative homeodomain protein" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE013599 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601
GeneTree:ENSGT00700000104256 FlyBase:FBgn0025334 EMBL:BT028839
RefSeq:NP_523834.1 UniGene:Dm.5689 SMR:Q9W1H7 IntAct:Q9W1H7
MINT:MINT-1561397 STRING:Q9W1H7 EnsemblMetazoa:FBtr0072224
GeneID:37788 KEGG:dme:Dmel_CG11182 UCSC:CG11182-RA CTD:37788
InParanoid:Q9W1H7 OMA:YKLRANE GenomeRNAi:37788 NextBio:805410
Uniprot:Q9W1H7
Length = 220
Score = 132 (51.5 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 43/130 (33%), Positives = 68/130 (52%)
Query: 64 EEFDSTKS-GSEN---HEGASGDDQEQRPNK-KKRYHR--HTQHQIQEMEAFFKECPHPD 116
E + +T + GS N H + GDD +K K+R R T +Q+ E+E F E +PD
Sbjct: 79 EFYPATHNIGSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPD 138
Query: 117 DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALS 176
R+E++ +L L +V+ WFQN+R + + Q ERH ++ ++ KL D + A S
Sbjct: 139 IYTREEIASKLHLTEARVQVWFQNRRAKFRKQ-ERHAIYIMKDKSSKL--DGRKNPVAGS 195
Query: 177 NASCPNCGGP 186
P+ GP
Sbjct: 196 KYLGPSLKGP 205
>UNIPROTKB|O93385 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IEA] [GO:0001569
"patterning of blood vessels" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0002074 "extraocular skeletal muscle development"
evidence=IEA] [GO:0003171 "atrioventricular valve development"
evidence=IEA] [GO:0003253 "cardiac neural crest cell migration
involved in outflow tract morphogenesis" evidence=IEA] [GO:0003350
"pulmonary myocardium development" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007520 "myoblast fusion"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0021763 "subthalamic nucleus development"
evidence=IEA] [GO:0021855 "hypothalamus cell migration"
evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031076 "embryonic camera-type eye development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035886 "vascular smooth muscle cell differentiation"
evidence=IEA] [GO:0035993 "deltoid tuberosity development"
evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0048536
"spleen development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0051219 "phosphoprotein
binding" evidence=IEA] [GO:0055009 "atrial cardiac muscle tissue
morphogenesis" evidence=IEA] [GO:0055015 "ventricular cardiac
muscle cell development" evidence=IEA] [GO:0060412 "ventricular
septum morphogenesis" evidence=IEA] [GO:0060460 "left lung
morphogenesis" evidence=IEA] [GO:0060577 "pulmonary vein
morphogenesis" evidence=IEA] [GO:0060578 "superior vena cava
morphogenesis" evidence=IEA] [GO:0061031 "endodermal digestive
tract morphogenesis" evidence=IEA] [GO:0061072 "iris morphogenesis"
evidence=IEA] [GO:0061325 "cell proliferation involved in outflow
tract morphogenesis" evidence=IEA] [GO:0070986 "left/right axis
specification" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0061184 "positive regulation of dermatome development"
evidence=IDA] [GO:0045663 "positive regulation of myoblast
differentiation" evidence=IDA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IDA] [GO:2000287 "positive regulation of
myotome development" evidence=IDA] [GO:2000288 "positive regulation
of myoblast proliferation" evidence=IDA] [GO:0007368 "determination
of left/right symmetry" evidence=IEP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0016055 GO:GO:0001078
GO:GO:0045944 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0030334 GO:GO:0030326 GO:GO:0007368 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976 GO:GO:0001105
GO:GO:0031490 GO:GO:0001191 GO:GO:0045663 GO:GO:0043388
GO:GO:2000288 eggNOG:NOG249113 HOVERGEN:HBG068770 EMBL:AF076640
EMBL:AF077092 EMBL:AF063935 IPI:IPI00573554 IPI:IPI00602044
PIR:JW0097 RefSeq:NP_990341.1 UniGene:Gga.3398
ProteinModelPortal:O93385 SMR:O93385 STRING:O93385 GeneID:395862
KEGG:gga:395862 CTD:5308 KO:K04686 NextBio:20815929 GO:GO:0061184
GO:GO:2000287 Uniprot:O93385
Length = 333
Score = 137 (53.3 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 39/132 (29%), Positives = 65/132 (49%)
Query: 35 QPTNMMEGQLHPLDMTQNTSESEIARLREEEFDSTKSGS-----ENHEGASGDDQEQRPN 89
QP M L P +++ E+ RL T S ++ +G S D + P+
Sbjct: 38 QPALAMATALAP-GQARSSLEAAKHRLEVHTISDTSSPEAAEKEKSQQGKSEDAGPEDPS 96
Query: 90 KKKRYHRHTQH----QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
KKKR R H Q+QE+EA F+ +PD R+E++ L +V+ WF+N+R +
Sbjct: 97 KKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKW 156
Query: 146 KTQHERHENTQL 157
+ + ER++ +L
Sbjct: 157 R-KRERNQQAEL 167
>UNIPROTKB|G3X7M1 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 CTD:6473
OMA:SNHCPVH EMBL:DAAA02005893 RefSeq:NP_001178475.1
UniGene:Bt.106108 Ensembl:ENSBTAT00000038279 GeneID:615159
KEGG:bta:615159 NextBio:20899478 Uniprot:G3X7M1
Length = 306
Score = 136 (52.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 32/116 (27%), Positives = 59/116 (50%)
Query: 46 PLDMTQNTSESEIARLREEEFDSTKSG----SENHEGASGDDQEQRPNKKKRYHR--HTQ 99
P+ + ++ ++E +L+E G + + +D++ + K+R R T
Sbjct: 69 PVHLFKDHVDTEKDKLKEFGSGRAAEGIYDCKDKRDDVKSEDEDGQTKLKQRRSRTNFTL 128
Query: 100 HQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENT 155
Q+ E+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q + N+
Sbjct: 129 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHNS 184
>MGI|MGI:109632 [details] [associations]
symbol:Rax "retina and anterior neural fold homeobox"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0021854 "hypothalamus development" evidence=IMP]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0060173 "limb
development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:109632 GO:GO:0005634 EMBL:CH466528
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 eggNOG:NOG261733 GO:GO:0021854
GeneTree:ENSGT00700000104256 CleanEx:MM_RAX HOVERGEN:HBG021349
OrthoDB:EOG4V4387 CTD:30062 KO:K09332 OMA:CGPGFGD ChiTaRS:RAX
EMBL:AF001906 EMBL:U73177 EMBL:BC024731 EMBL:BC058757
IPI:IPI00132598 RefSeq:NP_038861.2 UniGene:Mm.489746
ProteinModelPortal:O35602 SMR:O35602 STRING:O35602
PhosphoSite:O35602 PRIDE:O35602 Ensembl:ENSMUST00000025396
GeneID:19434 KEGG:mmu:19434 InParanoid:Q6GT92 NextBio:296571
Bgee:O35602 Genevestigator:O35602 GermOnline:ENSMUSG00000024518
Uniprot:O35602
Length = 342
Score = 137 (53.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 36/113 (31%), Positives = 65/113 (57%)
Query: 79 ASGDD---QEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
A+GD +E+ P KK R +R T +Q+ E+E F++ +PD R+EL+ ++ L ++
Sbjct: 120 AAGDSKLSEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 179
Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGP 186
V+ WFQN+R + + Q E+ E + ++ ++ L + + R S+A P GP
Sbjct: 180 VQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPLLSFS---RSPPSSALAPLGTGP 228
>UNIPROTKB|E2RRG5 [details] [associations]
symbol:PITX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051216 "cartilage development" evidence=IEA]
[GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0021983 "pituitary gland
development" evidence=IEA] [GO:0014707 "branchiomeric skeletal
muscle development" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0051216 GO:GO:0035116 GO:GO:0021983 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000988 GO:GO:0048625
GO:GO:0014707 CTD:5307 KO:K09356 OMA:CKNSYLP
GeneTree:ENSGT00700000104438 EMBL:AAEX03007790 RefSeq:XP_850773.1
Ensembl:ENSCAFT00000001631 GeneID:481513 KEGG:cfa:481513
NextBio:20856289 Uniprot:E2RRG5
Length = 313
Score = 136 (52.9 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 37/118 (31%), Positives = 61/118 (51%)
Query: 46 PLDMTQNT-SESEIARLREEEFDSTKSGSENH-EGASGDDQEQRPNKKKRYHRHTQH--- 100
P + +N+ SES L E+E G E+ G +G + P KKK+ R H
Sbjct: 38 PREPLENSASESSDTELPEKERGGEVKGPEDSGAGGAGCGGAEDPAKKKKQRRQRTHFTS 97
Query: 101 -QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
Q+QE+EA F+ +PD R+E++ L +V+ WF+N+R + + + ER++ L
Sbjct: 98 QQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWR-KRERNQQLDL 154
>ZFIN|ZDB-GENE-990415-4 [details] [associations]
symbol:hoxa11b "homeo box A11b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-4 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG274734
HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
InterPro:IPR021918 Pfam:PF12045 OrthoDB:EOG4KKZ3X EMBL:AF287137
EMBL:DQ060539 EMBL:Y07698 IPI:IPI00487877 RefSeq:NP_571222.1
UniGene:Dr.85393 ProteinModelPortal:Q9DDU1 SMR:Q9DDU1 GeneID:30382
KEGG:dre:30382 CTD:30382 InParanoid:Q9DDU1 NextBio:20806797
ArrayExpress:Q9DDU1 Uniprot:Q9DDU1
Length = 283
Score = 135 (52.6 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 42/118 (35%), Positives = 61/118 (51%)
Query: 48 DMTQNTSESEIARLREEEFDSTKSGSENHEGA-SGDDQEQRPNKKKRYHRHTQHQIQEME 106
D + T E+E R EE S + S N+E SG Q+ KK+ +T++QI+E+E
Sbjct: 174 DSCRGTDETE----RCEETSSPEPSSGNNEDKFSGSSNGQKTRKKRC--PYTKYQIRELE 227
Query: 107 AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
F + + ++R +LSR L L QVK WFQN+R MK + + Q T N L
Sbjct: 228 REFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRR--MKEKKLNRDRLQYYTTNPLL 283
>UNIPROTKB|F6Y4K5 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 CTD:6474 KO:K09331
OMA:CTEAGRD EMBL:AAEX03013721 Ensembl:ENSCAFT00000014128
RefSeq:XP_003639881.1 GeneID:485732 KEGG:cfa:485732 Uniprot:F6Y4K5
Length = 319
Score = 136 (52.9 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 74 ENHEGASG-DDQEQRPNKKKRYHRH-TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
E E A G +D+ Q K++R + T Q+ E+E F E +PD R+ELS+ LGL
Sbjct: 122 ERKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 181
Query: 132 LQVKFWFQNKRTQMKTQHER 151
+V+ WFQN+R + + Q +
Sbjct: 182 ARVQVWFQNRRAKCRKQENQ 201
>RGD|3331 [details] [associations]
symbol:Pitx2 "paired-like homeodomain 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISO]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IDA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription factor
activity" evidence=ISO] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0001102 "RNA polymerase II activating transcription
factor binding" evidence=ISO] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001191 "RNA
polymerase II transcription factor binding transcription factor
activity involved in negative regulation of transcription"
evidence=ISO] [GO:0001569 "patterning of blood vessels" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001764 "neuron migration"
evidence=ISO] [GO:0002074 "extraocular skeletal muscle development"
evidence=ISO] [GO:0003171 "atrioventricular valve development"
evidence=ISO] [GO:0003253 "cardiac neural crest cell migration
involved in outflow tract morphogenesis" evidence=ISO] [GO:0003350
"pulmonary myocardium development" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007368 "determination of left/right
symmetry" evidence=ISO] [GO:0007420 "brain development" evidence=IEP]
[GO:0007507 "heart development" evidence=ISO] [GO:0007519 "skeletal
muscle tissue development" evidence=ISO] [GO:0007520 "myoblast
fusion" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008584 "male gonad development" evidence=IEP]
[GO:0008585 "female gonad development" evidence=IEP] [GO:0009653
"anatomical structure morphogenesis" evidence=ISO] [GO:0009725
"response to hormone stimulus" evidence=IEP] [GO:0009887 "organ
morphogenesis" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=ISO] [GO:0021763 "subthalamic nucleus development"
evidence=ISO] [GO:0021855 "hypothalamus cell migration" evidence=ISO]
[GO:0021983 "pituitary gland development" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=IEP] [GO:0030324 "lung development"
evidence=ISO] [GO:0030334 "regulation of cell migration"
evidence=ISO] [GO:0031076 "embryonic camera-type eye development"
evidence=ISO] [GO:0031490 "chromatin DNA binding" evidence=ISO]
[GO:0033189 "response to vitamin A" evidence=IEP] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=ISO] [GO:0035886
"vascular smooth muscle cell differentiation" evidence=ISO]
[GO:0035993 "deltoid tuberosity development" evidence=ISO]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0042475 "odontogenesis of dentin-containing tooth" evidence=IEP]
[GO:0042476 "odontogenesis" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043010 "camera-type eye
development" evidence=ISO] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0048536 "spleen development" evidence=ISO] [GO:0048557 "embryonic
digestive tract morphogenesis" evidence=ISO] [GO:0048738 "cardiac
muscle tissue development" evidence=ISO] [GO:0051219 "phosphoprotein
binding" evidence=ISO] [GO:0055007 "cardiac muscle cell
differentiation" evidence=ISO] [GO:0055009 "atrial cardiac muscle
tissue morphogenesis" evidence=ISO] [GO:0055015 "ventricular cardiac
muscle cell development" evidence=ISO] [GO:0055123 "digestive system
development" evidence=ISO] [GO:0060412 "ventricular septum
morphogenesis" evidence=ISO] [GO:0060460 "left lung morphogenesis"
evidence=ISO] [GO:0060577 "pulmonary vein morphogenesis"
evidence=ISO] [GO:0060578 "superior vena cava morphogenesis"
evidence=ISO] [GO:0061031 "endodermal digestive tract morphogenesis"
evidence=ISO] [GO:0061072 "iris morphogenesis" evidence=ISO]
[GO:0061325 "cell proliferation involved in outflow tract
morphogenesis" evidence=ISO] [GO:0070986 "left/right axis
specification" evidence=ISO] [GO:2000288 "positive regulation of
myoblast proliferation" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:3331 GO:GO:0005634 GO:GO:0005737 GO:GO:0001764 GO:GO:0007420
GO:GO:0016055 GO:GO:0030182 GO:GO:0008585 GO:GO:0001078 GO:GO:0001701
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0008584
GO:GO:0000978 GO:GO:0001077 GO:GO:0030334 GO:GO:0009725 GO:GO:0007368
GO:GO:0001569 GO:GO:0007520 GO:GO:0001570 GO:GO:0042475 GO:GO:0035116
GO:GO:0031076 GO:GO:0021983 GO:GO:0033189 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0001105 GO:GO:0031490
GO:GO:0055015 GO:GO:0001191 GO:GO:0055009 GO:GO:0035993 GO:GO:0043388
GO:GO:0002074 GO:GO:0060460 GO:GO:0060412 GO:GO:0048557 GO:GO:0061031
GO:GO:0021855 GO:GO:0003253 GO:GO:0061325 GO:GO:0003171 GO:GO:0061072
GO:GO:2000288 GO:GO:0003350 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438 CTD:5308 KO:K04686
OMA:DMYPSYT GO:GO:0060577 GO:GO:0021763 GO:GO:0060578 GO:GO:0035886
EMBL:AF039832 EMBL:AJ222971 EMBL:AJ222972 IPI:IPI00206778
IPI:IPI00231533 RefSeq:NP_001035970.1 RefSeq:NP_062207.1
UniGene:Rn.17591 ProteinModelPortal:Q9R0W1 SMR:Q9R0W1 STRING:Q9R0W1
PRIDE:Q9R0W1 Ensembl:ENSRNOT00000014368 Ensembl:ENSRNOT00000044232
GeneID:54284 KEGG:rno:54284 UCSC:RGD:3331 InParanoid:Q9R0W1
NextBio:610866 ArrayExpress:Q9R0W1 Genevestigator:Q9R0W1
GermOnline:ENSRNOG00000010681 Uniprot:Q9R0W1
Length = 324
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 36/125 (28%), Positives = 67/125 (53%)
Query: 35 QPTNMMEGQLHPLDM--TQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKK 92
QP ++ + H L++ +TS E+A E D + G GA D +++ +++
Sbjct: 43 QPRSL-DASKHRLEVHTISDTSSPEVA-----EKDKGQQGKNEDVGAE-DPSKKKRQRRQ 95
Query: 93 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERH 152
R H T Q+QE+EA F+ +PD R+E++ L +V+ WF+N+R + + + ER+
Sbjct: 96 RTH-FTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERN 153
Query: 153 ENTQL 157
+ +L
Sbjct: 154 QQAEL 158
>UNIPROTKB|A5D7J4 [details] [associations]
symbol:PITX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003350 "pulmonary myocardium development"
evidence=IEA] [GO:0003253 "cardiac neural crest cell migration
involved in outflow tract morphogenesis" evidence=IEA] [GO:0003171
"atrioventricular valve development" evidence=IEA] [GO:0002074
"extraocular skeletal muscle development" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0001569 "patterning of blood vessels"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0001078 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in negative regulation of transcription"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:2000288 "positive
regulation of myoblast proliferation" evidence=IEA] [GO:0070986
"left/right axis specification" evidence=IEA] [GO:0061325 "cell
proliferation involved in outflow tract morphogenesis"
evidence=IEA] [GO:0061072 "iris morphogenesis" evidence=IEA]
[GO:0061031 "endodermal digestive tract morphogenesis"
evidence=IEA] [GO:0060578 "superior vena cava morphogenesis"
evidence=IEA] [GO:0060577 "pulmonary vein morphogenesis"
evidence=IEA] [GO:0060460 "left lung morphogenesis" evidence=IEA]
[GO:0060412 "ventricular septum morphogenesis" evidence=IEA]
[GO:0055015 "ventricular cardiac muscle cell development"
evidence=IEA] [GO:0055009 "atrial cardiac muscle tissue
morphogenesis" evidence=IEA] [GO:0051219 "phosphoprotein binding"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042476 "odontogenesis" evidence=IEA] [GO:0035993 "deltoid
tuberosity development" evidence=IEA] [GO:0035886 "vascular smooth
muscle cell differentiation" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0031076 "embryonic camera-type eye
development" evidence=IEA] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0021855 "hypothalamus cell migration"
evidence=IEA] [GO:0021763 "subthalamic nucleus development"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0007520 "myoblast fusion" evidence=IEA]
[GO:0007368 "determination of left/right symmetry" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0001764 GO:GO:0016055 GO:GO:0001078
GO:GO:0001701 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0030334 GO:GO:0007368 GO:GO:0001569 GO:GO:0007520
GO:GO:0001570 GO:GO:0035116 GO:GO:0031076 GO:GO:0021983
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GO:GO:0042476 GO:GO:0001105 GO:GO:0031490 GO:GO:0055015
GO:GO:0001191 GO:GO:0055009 GO:GO:0035993 GO:GO:0043388
GO:GO:0002074 GO:GO:0060460 GO:GO:0060412 GO:GO:0048557
GO:GO:0061031 GO:GO:0021855 GO:GO:0003253 GO:GO:0061325
GO:GO:0003171 GO:GO:0061072 GO:GO:2000288 GO:GO:0003350
eggNOG:NOG249113 HOGENOM:HOG000273886 HOVERGEN:HBG068770
GeneTree:ENSGT00700000104438 CTD:5308 KO:K04686 OMA:DMYPSYT
OrthoDB:EOG4W9J4N GO:GO:0060577 GO:GO:0021763 GO:GO:0060578
GO:GO:0035886 EMBL:DAAA02016521 EMBL:BC140579 IPI:IPI00700494
RefSeq:NP_001091460.1 UniGene:Bt.18496 SMR:A5D7J4 STRING:A5D7J4
Ensembl:ENSBTAT00000011939 GeneID:506721 KEGG:bta:506721
InParanoid:A5D7J4 NextBio:20867727 Uniprot:A5D7J4
Length = 325
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 33/120 (27%), Positives = 62/120 (51%)
Query: 42 GQLHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQH- 100
GQ LD +++ E+ + + ++ +G + D + P+KKKR R H
Sbjct: 43 GQARSLDSSKH--RLEVHTISDTPSPEAAEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHF 100
Query: 101 ---QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
Q+QE+EA F+ +PD R+E++ L +V+ WF+N+R + + + ER++ +L
Sbjct: 101 TSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 159
>UNIPROTKB|E2R5R2 [details] [associations]
symbol:PITX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104438 CTD:5308 KO:K04686
OMA:DMYPSYT EMBL:AAEX03016824 RefSeq:XP_851370.1
ProteinModelPortal:E2R5R2 Ensembl:ENSCAFT00000018452 GeneID:487902
KEGG:cfa:487902 NextBio:20861384 Uniprot:E2R5R2
Length = 325
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 33/120 (27%), Positives = 61/120 (50%)
Query: 42 GQLHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQH- 100
GQ LD ++ E+ + + ++ +G + D + P+KKKR R H
Sbjct: 43 GQTRSLDSAKH--RLEVHTISDTSSPEAAEKDKSQQGKNEDVGTEDPSKKKRQRRQRTHF 100
Query: 101 ---QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
Q+QE+EA F+ +PD R+E++ L +V+ WF+N+R + + + ER++ +L
Sbjct: 101 TSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 159
>WB|WBGene00000450 [details] [associations]
symbol:ceh-28 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0034243 "regulation of transcription elongation from RNA
polymerase II promoter" evidence=ISS] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0050807 "regulation of synapse
organization" evidence=IMP] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000981
GO:GO:0000976 GO:GO:0050807 GO:GO:0034243
GeneTree:ENSGT00700000104129 KO:K09352 EMBL:Z77133 EMBL:AY205144
RefSeq:NP_510169.4 UniGene:Cel.11118 ProteinModelPortal:G5EE18
SMR:G5EE18 EnsemblMetazoa:K03A11.3 GeneID:191619
KEGG:cel:CELE_K03A11.3 CTD:191619 WormBase:K03A11.3 OMA:NPMFASA
NextBio:949702 Uniprot:G5EE18
Length = 201
Score = 129 (50.5 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 74 ENHEGASGDDQ-EQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLE 130
+NH S D R ++KR R TQHQ+ E+E FK+ + +R+EL++ LGL
Sbjct: 85 QNHRQHSNPDTINLRSQQQKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLT 144
Query: 131 PLQVKFWFQNKRTQMK 146
QVK WFQN+R + K
Sbjct: 145 ATQVKIWFQNRRYKCK 160
>UNIPROTKB|G5EE18 [details] [associations]
symbol:ceh-28 "NK-2 family homeodomain protein CEH-28"
species:6239 "Caenorhabditis elegans" [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=ISS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000981 GO:GO:0000976
GO:GO:0050807 GO:GO:0034243 GeneTree:ENSGT00700000104129 KO:K09352
EMBL:Z77133 EMBL:AY205144 RefSeq:NP_510169.4 UniGene:Cel.11118
ProteinModelPortal:G5EE18 SMR:G5EE18 EnsemblMetazoa:K03A11.3
GeneID:191619 KEGG:cel:CELE_K03A11.3 CTD:191619 WormBase:K03A11.3
OMA:NPMFASA NextBio:949702 Uniprot:G5EE18
Length = 201
Score = 129 (50.5 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 74 ENHEGASGDDQ-EQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLE 130
+NH S D R ++KR R TQHQ+ E+E FK+ + +R+EL++ LGL
Sbjct: 85 QNHRQHSNPDTINLRSQQQKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLT 144
Query: 131 PLQVKFWFQNKRTQMK 146
QVK WFQN+R + K
Sbjct: 145 ATQVKIWFQNRRYKCK 160
>UNIPROTKB|E2QZN5 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 Ensembl:ENSCAFT00000014128 Uniprot:E2QZN5
Length = 334
Score = 136 (52.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 74 ENHEGASG-DDQEQRPNKKKRYHRH-TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
E E A G +D+ Q K++R + T Q+ E+E F E +PD R+ELS+ LGL
Sbjct: 125 ERKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 184
Query: 132 LQVKFWFQNKRTQMKTQHER 151
+V+ WFQN+R + + Q +
Sbjct: 185 ARVQVWFQNRRAKCRKQENQ 204
>UNIPROTKB|Q8NHV9 [details] [associations]
symbol:RHOXF1 "Rhox homeobox family member 1" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0003677 "DNA
binding" evidence=NAS] [GO:0007275 "multicellular organismal
development" evidence=NAS] [GO:0019953 "sexual reproduction"
evidence=IEP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0007276 "gamete generation"
evidence=NAS] [GO:0030518 "intracellular steroid hormone receptor
signaling pathway" evidence=NAS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0007276 GO:GO:0030518 EMBL:AC005023
EMBL:AY099086 EMBL:BC069324 EMBL:BC069529 EMBL:BC103857
EMBL:BC103858 IPI:IPI00169348 RefSeq:NP_644811.1 UniGene:Hs.644617
ProteinModelPortal:Q8NHV9 SMR:Q8NHV9 IntAct:Q8NHV9 STRING:Q8NHV9
DMDM:37537960 PRIDE:Q8NHV9 DNASU:158800 Ensembl:ENST00000217999
GeneID:158800 KEGG:hsa:158800 UCSC:uc004esk.1 CTD:158800
GeneCards:GC0XM119243 HGNC:HGNC:29993 MIM:300446 neXtProt:NX_Q8NHV9
PharmGKB:PA162401287 eggNOG:NOG257474 HOGENOM:HOG000154120
InParanoid:Q8NHV9 OMA:NKRARCR OrthoDB:EOG4FFD33 PhylomeDB:Q8NHV9
GenomeRNAi:158800 NextBio:87811 Bgee:Q8NHV9 CleanEx:HS_RHOXF1
Genevestigator:Q8NHV9 GermOnline:ENSG00000101883 Uniprot:Q8NHV9
Length = 184
Score = 126 (49.4 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 31/94 (32%), Positives = 52/94 (55%)
Query: 74 ENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
E + A Q + + R + T Q++E+E+ F+ +PD R+EL+ LG+ +
Sbjct: 87 EPAQAAMEGPQPENMQPRTRRTKFTLLQVEELESVFRHTQYPDVPTRRELAENLGVTEDK 146
Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRAD 167
V+ WF+NKR + + +H+R +L NE LRAD
Sbjct: 147 VRVWFKNKRARCR-RHQR----ELMLANE-LRAD 174
>UNIPROTKB|A6NLG4 [details] [associations]
symbol:SHOX2 "cDNA FLJ38019 fis, clone CTONG2012758, highly
similar to Short stature homeobox protein 2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CH471052
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 UniGene:Hs.55967 HGNC:HGNC:10854
HOVERGEN:HBG007233 NextBio:25151 EMBL:AC112502 EMBL:AK095338
IPI:IPI01024865 SMR:A6NLG4 STRING:A6NLG4 Ensembl:ENST00000441443
Ensembl:ENST00000490689 Uniprot:A6NLG4
Length = 190
Score = 127 (49.8 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 82 DDQEQRPNKKKRYHRH-TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
+D+ Q K++R + T Q+ E+E F E +PD R+ELS+ LGL +V+ WFQN
Sbjct: 2 EDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQN 61
Query: 141 KRTQMKTQHER 151
+R + + Q +
Sbjct: 62 RRAKCRKQENQ 72
>UNIPROTKB|Q9Y2V3 [details] [associations]
symbol:RAX "Retinal homeobox protein Rx" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007601 "visual perception" evidence=TAS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007601 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 Orphanet:2542 EMBL:AC067859 CleanEx:HS_RAX
HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062 KO:K09332
EMBL:AF115392 IPI:IPI00021025 RefSeq:NP_038463.2 UniGene:Hs.278957
ProteinModelPortal:Q9Y2V3 SMR:Q9Y2V3 STRING:Q9Y2V3
PhosphoSite:Q9Y2V3 DMDM:296452886 PaxDb:Q9Y2V3 PRIDE:Q9Y2V3
DNASU:30062 Ensembl:ENST00000334889 GeneID:30062 KEGG:hsa:30062
UCSC:uc002lhx.3 GeneCards:GC18M056909 H-InvDB:HIX0202674
HGNC:HGNC:18662 MIM:601881 MIM:611038 neXtProt:NX_Q9Y2V3
PharmGKB:PA38626 InParanoid:Q9Y2V3 OMA:CGPGFGD PhylomeDB:Q9Y2V3
ChiTaRS:RAX GenomeRNAi:30062 NextBio:52852 ArrayExpress:Q9Y2V3
Bgee:Q9Y2V3 Genevestigator:Q9Y2V3 GermOnline:ENSG00000134438
Uniprot:Q9Y2V3
Length = 346
Score = 136 (52.9 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 35/116 (30%), Positives = 65/116 (56%)
Query: 84 QEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 141
+E++P KK R +R T +Q+ E+E F++ +PD R+EL+ ++ L ++V+ WFQN+
Sbjct: 128 EEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 187
Query: 142 RTQMKTQHERHENTQLRTENEKLRADNMRYREA-LSNASC-PNCGGPTAIGEMSFD 195
R + + Q E+ E + ++ ++ L + + A LS P GG A G + +
Sbjct: 188 RAKWRRQ-EKLEVSSMKLQDSPLLSFSRSPPSATLSPLGAGPGSGGGPAGGALPLE 242
>UNIPROTKB|F1P452 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0000988 "protein binding transcription
factor activity" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0014707 "branchiomeric
skeletal muscle development" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005737
GO:GO:0005730 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000988 OMA:CKNSYLP
GeneTree:ENSGT00700000104438 EMBL:AADN02028369 IPI:IPI00820270
Ensembl:ENSGALT00000010289 Uniprot:F1P452
Length = 311
Score = 135 (52.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 37/137 (27%), Positives = 72/137 (52%)
Query: 35 QPTNMMEGQLH------PLDMTQNT----SESEIARLREEEFDSTK----SGSENHEGAS 80
QP++ M H P D +N+ S++E+ + + + TK G+ +GA+
Sbjct: 20 QPSHDMASSFHLQRSSEPRDPIENSASESSDTEVPERKRGKENLTKREGGGGNAAADGAA 79
Query: 81 GDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
D +++ +++R H T Q+QE+EA F+ +PD R+E++ L +V+ WF+N
Sbjct: 80 DDPAKKKKQRRQRTH-FTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKN 138
Query: 141 KRTQMKTQHERHENTQL 157
+R + + + ER++ L
Sbjct: 139 RRAKWR-KRERNQQMDL 154
>UNIPROTKB|F1NH36 [details] [associations]
symbol:Gga.55791 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104256 EMBL:AADN02057236 EMBL:AADN02063546
IPI:IPI00822313 Ensembl:ENSGALT00000021906 OMA:MVDDSCL
ArrayExpress:F1NH36 Uniprot:F1NH36
Length = 262
Score = 133 (51.9 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 35/122 (28%), Positives = 66/122 (54%)
Query: 49 MTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEME 106
M N E ++ LR+ SE A+ + E++P KK R +R T +Q+ E+E
Sbjct: 35 MFLNKCEGDLGELRKP------GDSEGTPPAAAE--EEQPKKKHRRNRTTFTTYQLHELE 86
Query: 107 AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRA 166
F++ +PD R+EL+ ++ L ++V+ WFQN+R + + Q E+ E + ++ + + +
Sbjct: 87 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKMEASSMKLHDTPMLS 145
Query: 167 DN 168
N
Sbjct: 146 FN 147
>UNIPROTKB|D6RFI4 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 EMBL:AC017068
HOGENOM:HOG000273886 HGNC:HGNC:9005 ChiTaRS:PITX2 IPI:IPI00968016
ProteinModelPortal:D6RFI4 SMR:D6RFI4 Ensembl:ENST00000511837
ArrayExpress:D6RFI4 Bgee:D6RFI4 Uniprot:D6RFI4
Length = 290
Score = 134 (52.2 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 30/114 (26%), Positives = 59/114 (51%)
Query: 48 DMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQH----QIQ 103
D ++ E+ ++ + ++ +G + D + P+KKKR R H Q+Q
Sbjct: 39 DSPESRKEAASSKFFPRQHPGANEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQ 98
Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
E+EA F+ +PD R+E++ L +V+ WF+N+R + + + ER++ +L
Sbjct: 99 ELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 151
>UNIPROTKB|F1S7P4 [details] [associations]
symbol:RAX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
OMA:SFGPHAF EMBL:FP102497 Ensembl:ENSSSCT00000014739 Uniprot:F1S7P4
Length = 184
Score = 125 (49.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 32/91 (35%), Positives = 50/91 (54%)
Query: 66 FDSTKSGSENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKEL 123
F S GS G G E P KK R +R T +Q+ ++E F+ +PD R+EL
Sbjct: 2 FLSPGEGSAAEGGGPGPGDEA-PKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREEL 60
Query: 124 SRELGLEPLQVKFWFQNKRTQMKTQHERHEN 154
+ ++ L ++V+ WFQN+R + + Q ER E+
Sbjct: 61 AAKVHLPEVRVQVWFQNRRAKWRRQ-ERLES 90
>UNIPROTKB|H0YIA6 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0005730
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080 InterPro:IPR021918
Pfam:PF12045 HGNC:HGNC:5101 ChiTaRS:HOXA11 Ensembl:ENST00000517402
Uniprot:H0YIA6
Length = 283
Score = 136 (52.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 50 TQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFF 109
T +E + R R E S +S S + E +G QR KK+ +T++QI+E+E F
Sbjct: 173 TAAAAEEKERRRRPESSSSPESSSGHTEDKAGGSSGQRTRKKRC--PYTKYQIRELEREF 230
Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
+ + ++R +LSR L L QVK WFQN+R MK + + Q + N L
Sbjct: 231 FFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRR--MKEKKINRDRLQYYSANPLL 283
Score = 38 (18.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 11 NMPSTIGRNG 20
N ST+GRNG
Sbjct: 95 NFYSTVGRNG 104
>ZFIN|ZDB-GENE-060421-3623 [details] [associations]
symbol:pitx1 "paired-like homeodomain
transcription factor 1" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-060421-3623
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 HOVERGEN:HBG068770 OMA:CKNSYLP
GeneTree:ENSGT00700000104438 EMBL:CABZ01050114 EMBL:CABZ01050115
EMBL:EU580407 IPI:IPI00632106 UniGene:Dr.93570 STRING:B2LT56
Ensembl:ENSDART00000062803 Uniprot:B2LT56
Length = 285
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 32/108 (29%), Positives = 60/108 (55%)
Query: 51 QNTS-ESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFF 109
+NTS ES E+E +S + + + DD +++ +++R H T Q+QE+EA F
Sbjct: 23 ENTSSESSDTEAAEKE----RSVEQRSDDGNADDPKKKKQRRQRTH-FTSQQLQELEATF 77
Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
+ +PD R+E++ L +V+ WF+N+R + + + ER++ L
Sbjct: 78 QRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQMDL 124
>UNIPROTKB|Q9PVX0 [details] [associations]
symbol:RX2 "Retinal homeobox protein Rx2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 HOVERGEN:HBG021349
EMBL:AB020318 IPI:IPI00590568 UniGene:Gga.27
ProteinModelPortal:Q9PVX0 SMR:Q9PVX0 Uniprot:Q9PVX0
Length = 317
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 31/107 (28%), Positives = 61/107 (57%)
Query: 63 EEEFDSTKSGSENHEGASGDDQ---EQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDD 117
+E + + E G GD + E++P KK R +R T +Q+ E+E F++ +PD
Sbjct: 90 QEPYCPGSASPELPAGDGGDGKPSDEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 149
Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
R+EL+ ++ L ++V+ WFQN+R + + Q E+ E + ++ ++ +
Sbjct: 150 YSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPI 195
>UNIPROTKB|Q99697 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001569 "patterning
of blood vessels" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002074 "extraocular skeletal muscle development" evidence=IEA]
[GO:0003171 "atrioventricular valve development" evidence=IEA]
[GO:0003350 "pulmonary myocardium development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007520 "myoblast fusion"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IEA] [GO:0021763 "subthalamic
nucleus development" evidence=IEA] [GO:0021855 "hypothalamus cell
migration" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031076 "embryonic camera-type eye development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0033189 "response to vitamin A" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035886
"vascular smooth muscle cell differentiation" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0055009 "atrial cardiac muscle tissue
morphogenesis" evidence=IEA] [GO:0055015 "ventricular cardiac
muscle cell development" evidence=IEA] [GO:0060412 "ventricular
septum morphogenesis" evidence=IEA] [GO:0060460 "left lung
morphogenesis" evidence=IEA] [GO:0060577 "pulmonary vein
morphogenesis" evidence=IEA] [GO:0060578 "superior vena cava
morphogenesis" evidence=IEA] [GO:0061031 "endodermal digestive
tract morphogenesis" evidence=IEA] [GO:2000288 "positive regulation
of myoblast proliferation" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007368
"determination of left/right symmetry" evidence=ISS] [GO:0001102
"RNA polymerase II activating transcription factor binding"
evidence=IPI] [GO:0048536 "spleen development" evidence=ISS]
[GO:0070986 "left/right axis specification" evidence=ISS]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0061072
"iris morphogenesis" evidence=IMP] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001105 "RNA polymerase
II transcription coactivator activity" evidence=IDA] [GO:0060127
"prolactin secreting cell differentiation" evidence=TAS]
[GO:0060126 "somatotropin secreting cell differentiation"
evidence=TAS] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0042476 "odontogenesis" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0043021 "ribonucleoprotein complex
binding" evidence=IC] [GO:0051219 "phosphoprotein binding"
evidence=IPI] [GO:0061325 "cell proliferation involved in outflow
tract morphogenesis" evidence=ISS] [GO:0035993 "deltoid tuberosity
development" evidence=IMP] [GO:0003253 "cardiac neural crest cell
migration involved in outflow tract morphogenesis" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IDA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IPI]
[GO:0035315 "hair cell differentiation" evidence=IC]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0001764 GO:GO:0016055 GO:GO:0001078 GO:GO:0001701
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0030334 GO:GO:0000981
GO:GO:0007368 GO:GO:0001569 GO:GO:0007520 GO:GO:0048536
EMBL:CH471057 GO:GO:0001570 GO:GO:0035116 GO:GO:0070986
GO:GO:0031076 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GO:GO:0042476 GO:GO:0001105 GO:GO:0043021
GO:GO:0031490 GO:GO:0055015 GO:GO:0001191 GO:GO:0055009
GO:GO:0035993 GO:GO:0043388 GO:GO:0002074 GO:GO:0060460
GO:GO:0060412 MIM:604229 Orphanet:708 GO:GO:0035315 GO:GO:0048557
GO:GO:0061031 GO:GO:0021855 Orphanet:98978 Orphanet:782
Orphanet:91483 GO:GO:0003253 GO:GO:0061325 GO:GO:0003171
GO:GO:0061072 GO:GO:2000288 GO:GO:0003350 eggNOG:NOG249113
HOVERGEN:HBG068770 CTD:5308 KO:K04686 OMA:DMYPSYT EMBL:U69961
EMBL:AF048720 EMBL:AF048721 EMBL:AF048722 EMBL:AF238048
EMBL:AK127829 EMBL:AK313987 EMBL:BC013998 EMBL:BC106010
IPI:IPI00017093 IPI:IPI00220801 IPI:IPI00220802 RefSeq:NP_000316.2
RefSeq:NP_001191326.1 RefSeq:NP_001191327.1 RefSeq:NP_001191328.1
RefSeq:NP_700475.1 RefSeq:NP_700476.1 UniGene:Hs.643588
UniGene:Hs.738484 PDB:2L7F PDB:2L7M PDB:2LKX PDBsum:2L7F
PDBsum:2L7M PDBsum:2LKX ProteinModelPortal:Q99697 SMR:Q99697
IntAct:Q99697 STRING:Q99697 DMDM:6174907 PRIDE:Q99697 DNASU:5308
Ensembl:ENST00000306732 Ensembl:ENST00000354925
Ensembl:ENST00000355080 Ensembl:ENST00000394598 GeneID:5308
KEGG:hsa:5308 UCSC:uc003iac.3 UCSC:uc003iad.3 UCSC:uc003iae.3
GeneCards:GC04M111538 HGNC:HGNC:9005 MIM:137600 MIM:180500
MIM:180550 MIM:601542 neXtProt:NX_Q99697 Orphanet:91481
PharmGKB:PA33339 OrthoDB:EOG4W9J4N ChiTaRS:PITX2
EvolutionaryTrace:Q99697 GenomeRNAi:5308 NextBio:20518
ArrayExpress:Q99697 Bgee:Q99697 CleanEx:HS_PITX2
Genevestigator:Q99697 GermOnline:ENSG00000164093 GO:GO:0060127
GO:GO:0060577 GO:GO:0060126 GO:GO:0021763 GO:GO:0060578
GO:GO:0035886 Uniprot:Q99697
Length = 317
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 30/114 (26%), Positives = 59/114 (51%)
Query: 48 DMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQH----QIQ 103
D ++ E+ ++ + ++ +G + D + P+KKKR R H Q+Q
Sbjct: 39 DSPESRKEAASSKFFPRQHPGANEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQ 98
Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
E+EA F+ +PD R+E++ L +V+ WF+N+R + + + ER++ +L
Sbjct: 99 ELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 151
>RGD|1586211 [details] [associations]
symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
"dorsal spinal cord development" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
Genevestigator:P18863 Uniprot:P18863
Length = 92
Score = 114 (45.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 97 HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQ 156
++++Q E+E F P+ K+R E+S LGL QVK WFQN+R + K ++ + +
Sbjct: 18 YSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPS 77
Query: 157 LRTENEKLRADNM 169
+ E E+L + +
Sbjct: 78 SKCEQEELEKEKL 90
>UNIPROTKB|I3L828 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=IEA] [GO:0060415
"muscle tissue morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0050772 "positive regulation of axonogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0003170 "heart valve development"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326
GO:GO:0050772 GO:GO:0032330 GO:GO:0001649 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
KO:K09331 OMA:CTEAGRD GO:GO:0003170 EMBL:FP312663
RefSeq:NP_001230281.1 UniGene:Ssc.38718 Ensembl:ENSSSCT00000025053
GeneID:100628206 KEGG:ssc:100628206 Uniprot:I3L828
Length = 321
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 47 LDM--TQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQE 104
LDM + + E RL E K E+ +G + Q + ++ R + T Q+ E
Sbjct: 99 LDMGAAERSREPGSPRLTEVS-PELKDRKEDAKGMEDEGQTKIKQRRSRTN-FTLEQLNE 156
Query: 105 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q +
Sbjct: 157 LERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQ 203
>ZFIN|ZDB-GENE-990415-237 [details] [associations]
symbol:rx2 "retinal homeobox gene 2" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0060219 "camera-type eye photoreceptor cell differentiation"
evidence=IGI] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-237 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 eggNOG:NOG261733 GO:GO:0060219 HOVERGEN:HBG021349
OrthoDB:EOG4V4387 KO:K09332 EMBL:AF001908 IPI:IPI00483924
RefSeq:NP_571301.1 UniGene:Dr.75762 ProteinModelPortal:O42357
SMR:O42357 STRING:O42357 GeneID:30473 KEGG:dre:30473 CTD:30473
InParanoid:O42357 NextBio:20806866 ArrayExpress:O42357
Uniprot:O42357
Length = 327
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/108 (26%), Positives = 59/108 (54%)
Query: 63 EEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQR 120
+ + +S E+ + E +P KK R +R T +Q+ E+E F++ +PD R
Sbjct: 106 DADLGDPRSNVESDSRSPDIPDEDQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSR 165
Query: 121 KELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
+EL+ ++ L ++V+ WFQN+R + + Q E+ + ++ + +R+ N
Sbjct: 166 EELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKMDTGTMKLHDSPIRSFN 212
>UNIPROTKB|F1MXQ1 [details] [associations]
symbol:F1MXQ1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 GO:GO:0030902
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:DAAA02012122
EMBL:DAAA02012123 IPI:IPI00718569 Ensembl:ENSBTAT00000028648
OMA:PSTHMEA Uniprot:F1MXQ1
Length = 186
Score = 125 (49.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/91 (29%), Positives = 53/91 (58%)
Query: 84 QEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 141
+++ PNK+ + R T Q+Q ++A F+ + +++R+ L++EL L Q+K WFQNK
Sbjct: 89 KKKNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIKIWFQNK 148
Query: 142 RTQMK--TQHERHENTQLRTENEKLRADNMR 170
R ++K T + +T + + +R+ +R
Sbjct: 149 RAKIKKATGSKNTPSTHMEAQGPAMRSAGLR 179
>UNIPROTKB|E1BLB9 [details] [associations]
symbol:E1BLB9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=IEA] [GO:0060415
"muscle tissue morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0050772 "positive regulation of axonogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0003170 "heart valve development"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326
GO:GO:0050772 GO:GO:0032330 GO:GO:0001649 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 OMA:CTEAGRD
GO:GO:0003170 EMBL:DAAA02002472 IPI:IPI00838807 UniGene:Bt.59425
Ensembl:ENSBTAT00000044731 NextBio:20874258 Uniprot:E1BLB9
Length = 331
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 47 LDM--TQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQE 104
LDM + + E RL E K E+ +G + Q + ++ R + T Q+ E
Sbjct: 97 LDMGAAERSREPGSPRLTEVS-PELKDRKEDAKGMEDEGQTKIKQRRSRTN-FTLEQLNE 154
Query: 105 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q +
Sbjct: 155 LERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQ 201
>UNIPROTKB|O60902 [details] [associations]
symbol:SHOX2 "Short stature homeobox protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0002063 "chondrocyte development" evidence=IEA] [GO:0003170
"heart valve development" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA] [GO:2000172 "regulation of branching morphogenesis of
a nerve" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=TAS] [GO:0007399
"nervous system development" evidence=TAS] [GO:0007507 "heart
development" evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0007399 GO:GO:0007507 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001501 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
EMBL:AJ002367 EMBL:AJ002368 EMBL:BC008829 EMBL:AF022654
EMBL:AF023203 IPI:IPI00218369 IPI:IPI00295006 IPI:IPI00793628
RefSeq:NP_001157150.1 RefSeq:NP_003021.3 RefSeq:NP_006875.2
UniGene:Hs.55967 ProteinModelPortal:O60902 SMR:O60902 IntAct:O60902
STRING:O60902 PhosphoSite:O60902 PaxDb:O60902 PRIDE:O60902
DNASU:6474 Ensembl:ENST00000389589 Ensembl:ENST00000425436
GeneID:6474 KEGG:hsa:6474 UCSC:uc003fbr.3 UCSC:uc003fbs.3
UCSC:uc010hvw.3 CTD:6474 GeneCards:GC03M157813 HGNC:HGNC:10854
MIM:602504 neXtProt:NX_O60902 PharmGKB:PA35756 eggNOG:NOG113578
HOVERGEN:HBG007233 InParanoid:O60902 KO:K09331 OMA:CTEAGRD
OrthoDB:EOG41C6X2 GenomeRNAi:6474 NextBio:25151 ArrayExpress:O60902
Bgee:O60902 CleanEx:HS_SHOX2 Genevestigator:O60902
GermOnline:ENSG00000168779 Uniprot:O60902
Length = 331
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 47 LDM--TQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQE 104
LDM + + E RL E K E+ +G + Q + ++ R + T Q+ E
Sbjct: 97 LDMGAAERSREPGSPRLTEVS-PELKDRKEDAKGMEDEGQTKIKQRRSRTN-FTLEQLNE 154
Query: 105 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q +
Sbjct: 155 LERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQ 201
>UNIPROTKB|Q9IAL1 [details] [associations]
symbol:VSX2 "Visual system homeobox 2" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0060040 "retinal
bipolar neuron differentiation" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005737
GO:GO:0008285 GO:GO:0005730 GO:GO:0008284 GO:GO:0007601
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0050896 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
GO:GO:0045165 eggNOG:NOG237888 HOGENOM:HOG000115909 KO:K09336
InterPro:IPR023339 PROSITE:PS51496 HOVERGEN:HBG036251 EMBL:AF178671
IPI:IPI00600652 RefSeq:NP_990099.1 UniGene:Gga.289
ProteinModelPortal:Q9IAL1 SMR:Q9IAL1 Ensembl:ENSGALT00000016606
GeneID:395536 KEGG:gga:395536 CTD:338917 InParanoid:Q9IAL1
OMA:FSKPEYQ OrthoDB:EOG4QVCCV NextBio:20815613 Uniprot:Q9IAL1
Length = 377
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/161 (26%), Positives = 76/161 (47%)
Query: 1 MPTGVMIPARNM--PSTIGRNGNVXXXXXXXXXXXXQPTNMMEGQLHPLDMTQNTSESEI 58
+P G ++ AR++ P+ +G G QPT L L Q+ +
Sbjct: 73 LPAGHLLAARSVLSPAGVGGVGMGLLGAGGIPGFYAQPTF-----LEVLSDPQSVHLQPL 127
Query: 59 ARLREEEFDSTKSGSENHEGASGDDQE-------QRPNKKKRYHR--HTQHQIQEMEAFF 109
AR + DS+++ S + E S D++ Q +KKR HR T +Q++E+E F
Sbjct: 128 ARA-PGQLDSSQTASSDSEDVSSSDRKMSKSSLNQSKKRKKRRHRTIFTSYQLEELEKAF 186
Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
E +PD R+ L+ + L +++ WFQN+R + + + +
Sbjct: 187 NEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREK 227
>UNIPROTKB|F1SMS6 [details] [associations]
symbol:RAX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0021854 "hypothalamus development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 GO:GO:0021854 GeneTree:ENSGT00700000104256
OMA:CGPGFGD EMBL:CU076088 Ensembl:ENSSSCT00000005417 Uniprot:F1SMS6
Length = 347
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 34/108 (31%), Positives = 62/108 (57%)
Query: 84 QEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 141
+E++P KK R +R T +Q+ E+E F++ +PD R+EL+ ++ L ++V+ WFQN+
Sbjct: 129 EEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 188
Query: 142 RTQMKTQHERHENTQLRTENEKLRA-DNMRYREALS--NASCPNCGGP 186
R + + Q E+ E + ++ ++ L + AL+ AS GGP
Sbjct: 189 RAKWRRQ-EKLEVSSMKLQDSPLLSFSRSPPAAALAPLGASPEGSGGP 235
>MGI|MGI:96172 [details] [associations]
symbol:Hoxa11 "homeobox A11" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI;IMP]
[GO:0001656 "metanephros development" evidence=IGI] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IGI]
[GO:0001759 "organ induction" evidence=IGI] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IDA] [GO:0007501 "mesodermal cell fate specification"
evidence=IDA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IGI] [GO:0009954 "proximal/distal pattern
formation" evidence=IGI] [GO:0010720 "positive regulation of cell
development" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IGI] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IGI] [GO:0032993 "protein-DNA
complex" evidence=IDA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0048589 "developmental growth"
evidence=IGI] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IGI] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IGI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96172 GO:GO:0005737
GO:GO:0045893 GO:GO:0005730 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0060272 GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 CTD:3207
eggNOG:NOG274734 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
OMA:GGCRETA GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
OrthoDB:EOG4KKZ3X EMBL:U20371 EMBL:U20370 EMBL:AK133481
EMBL:BC119302 IPI:IPI00133248 PIR:G37290 RefSeq:NP_034580.1
UniGene:Mm.26954 ProteinModelPortal:P31311 SMR:P31311 IntAct:P31311
MINT:MINT-1172550 STRING:P31311 PhosphoSite:P31311 PRIDE:P31311
Ensembl:ENSMUST00000048026 GeneID:15396 KEGG:mmu:15396
UCSC:uc009byn.1 GeneTree:ENSGT00700000104263 InParanoid:P31311
NextBio:288080 Bgee:P31311 CleanEx:MM_HOXA11 Genevestigator:P31311
GermOnline:ENSMUSG00000038210 Uniprot:P31311
Length = 313
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 39/115 (33%), Positives = 57/115 (49%)
Query: 51 QNTSESEIARLREEEFDSTKSGSENH-EGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFF 109
Q + E R R E S+ S H E +G QR KK+ +T++QI+E+E F
Sbjct: 203 QEAAAEEKERRRRPESSSSPESSSGHTEDKAGGSGGQRTRKKRC--PYTKYQIRELEREF 260
Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
+ + ++R +LSR L L QVK WFQN+R MK + + Q + N L
Sbjct: 261 FFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRR--MKEKKINRDRLQYYSANPLL 313
>RGD|1564605 [details] [associations]
symbol:Hoxa11 "homeobox A11" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0001656
"metanephros development" evidence=ISO] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=ISO] [GO:0001759
"organ induction" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=ISO] [GO:0007501 "mesodermal cell fate
specification" evidence=ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISO] [GO:0009953 "dorsal/ventral
pattern formation" evidence=ISO] [GO:0009954 "proximal/distal
pattern formation" evidence=ISO] [GO:0010720 "positive regulation
of cell development" evidence=ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISO] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=ISO] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=ISO] [GO:0032993 "protein-DNA
complex" evidence=ISO] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=ISO] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048589 "developmental growth"
evidence=ISO] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=ISO] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1564605 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295 CTD:3207 KO:K09296
OMA:GGCRETA InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:CH474011 EMBL:AC122669
RefSeq:NP_001123350.1 RefSeq:XP_003749800.1 RefSeq:XP_003752232.1
RefSeq:XP_003753947.1 UniGene:Rn.224575 Ensembl:ENSRNOT00000010256
GeneID:100909443 GeneID:100911743 GeneID:368057 KEGG:rno:100909443
KEGG:rno:100911743 KEGG:rno:368057 NextBio:691993 Uniprot:G3V6Z0
Length = 313
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 39/115 (33%), Positives = 57/115 (49%)
Query: 51 QNTSESEIARLREEEFDSTKSGSENH-EGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFF 109
Q + E R R E S+ S H E +G QR KK+ +T++QI+E+E F
Sbjct: 203 QEAAAEEKERRRRPESSSSPESSSGHTEDKAGGSGGQRTRKKRC--PYTKYQIRELEREF 260
Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
+ + ++R +LSR L L QVK WFQN+R MK + + Q + N L
Sbjct: 261 FFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRR--MKEKKINRDRLQYYSANPLL 313
>UNIPROTKB|E1BHB8 [details] [associations]
symbol:LOC615339 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0021854 "hypothalamus development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 GO:GO:0021854 GeneTree:ENSGT00700000104256
OMA:CGPGFGD EMBL:DAAA02057180 IPI:IPI00710082
Ensembl:ENSBTAT00000030986 Uniprot:E1BHB8
Length = 351
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 35/113 (30%), Positives = 62/113 (54%)
Query: 79 ASGDD---QEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
A GD +E++P KK R +R T +Q+ E+E F++ +PD R+EL+ ++ L ++
Sbjct: 121 APGDSKLLEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 180
Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASC-PNCGG 185
V+ WFQN+R + + Q E+ E + ++ ++ L AL+ P GG
Sbjct: 181 VQVWFQNRRAKWRRQ-EKLEVSSMKLQDPLLSFSRSPPAAALAPLGAGPGGGG 232
>UNIPROTKB|Q7YRX0 [details] [associations]
symbol:RAX2 "Retina and anterior neural fold homeobox
protein 2" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007601 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0050896 Gene3D:1.10.10.60
SUPFAM:SSF46689 HOGENOM:HOG000231518 HSSP:P06601
GeneTree:ENSGT00700000104256 HOVERGEN:HBG021349 EMBL:AY211276
IPI:IPI00706984 RefSeq:NP_872594.1 UniGene:Bt.87576
ProteinModelPortal:Q7YRX0 SMR:Q7YRX0 STRING:Q7YRX0
Ensembl:ENSBTAT00000012858 GeneID:359713 KEGG:bta:359713 CTD:84839
eggNOG:NOG248147 InParanoid:Q7YRX0 KO:K09333 OMA:SFGPHAF
OrthoDB:EOG4V4387 NextBio:20812744 Uniprot:Q7YRX0
Length = 184
Score = 124 (48.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 28/80 (35%), Positives = 47/80 (58%)
Query: 77 EGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 134
EG E+ P KK R +R T +Q+ ++E F+ +PD R+EL+ ++ L ++V
Sbjct: 12 EGGGPGPGEEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRV 71
Query: 135 KFWFQNKRTQMKTQHERHEN 154
+ WFQN+R + + Q ER E+
Sbjct: 72 QVWFQNRRAKWRRQ-ERLES 90
>UNIPROTKB|I3L383 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
Uniprot:I3L383
Length = 128
Score = 113 (44.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 97 HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQ 156
++++Q E+E F P+ K+R E+S LGL QVK WFQN+R + K ++ + +
Sbjct: 2 YSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPS 61
Query: 157 LRTENEKLRADNM-RYREA 174
+ E E+L + R EA
Sbjct: 62 SKCEQEELEKQKLERAPEA 80
>RGD|1595784 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
system development" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
Uniprot:P18866
Length = 108
Score = 113 (44.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 88 PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
P ++ ++++Q E+E F P+ K+R E+S LGL QVK WFQN+R + K
Sbjct: 13 PGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 72
Query: 148 QHERHENTQLRTENEKLRADNMRYRE 173
++ + + R E EK+ + E
Sbjct: 73 ENNKDKLPGARDE-EKVEEEGNEEEE 97
>UNIPROTKB|P18866 [details] [associations]
symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
Length = 108
Score = 113 (44.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 88 PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
P ++ ++++Q E+E F P+ K+R E+S LGL QVK WFQN+R + K
Sbjct: 13 PGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 72
Query: 148 QHERHENTQLRTENEKLRADNMRYRE 173
++ + + R E EK+ + E
Sbjct: 73 ENNKDKLPGARDE-EKVEEEGNEEEE 97
>UNIPROTKB|Q9NZR4 [details] [associations]
symbol:VSX1 "Visual system homeobox 1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0042551 "neuron
maturation" evidence=IEA] [GO:0060040 "retinal bipolar neuron
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0050896
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL080312 GO:GO:0060040
GO:GO:0042551 Orphanet:98973 eggNOG:NOG237888 InterPro:IPR023339
PROSITE:PS51496 CTD:30813 HOVERGEN:HBG036251 KO:K09335 OMA:WGSDHLK
EMBL:AF176797 EMBL:AF251033 EMBL:AF251034 EMBL:DQ854807
EMBL:DQ854808 EMBL:DQ854809 EMBL:DQ854810 EMBL:DQ854811
EMBL:DQ854812 EMBL:BC126228 EMBL:BC136497 EMBL:GU138372
IPI:IPI00165074 IPI:IPI00215633 IPI:IPI00215634 IPI:IPI00215635
IPI:IPI00886819 IPI:IPI00909178 IPI:IPI00915914 IPI:IPI00943354
RefSeq:NP_001243200.1 RefSeq:NP_001243201.1 RefSeq:NP_055403.2
RefSeq:NP_955457.1 UniGene:Hs.274264 ProteinModelPortal:Q9NZR4
SMR:Q9NZR4 STRING:Q9NZR4 PhosphoSite:Q9NZR4 DMDM:25009572
PRIDE:Q9NZR4 Ensembl:ENST00000376707 Ensembl:ENST00000376709
Ensembl:ENST00000398332 Ensembl:ENST00000409285
Ensembl:ENST00000409958 Ensembl:ENST00000424574
Ensembl:ENST00000429762 Ensembl:ENST00000444511
Ensembl:ENST00000451258 GeneID:30813 KEGG:hsa:30813 UCSC:uc002wuf.3
UCSC:uc002wug.1 UCSC:uc010gdd.2 UCSC:uc010gdf.2
GeneCards:GC20M025051 HGNC:HGNC:12723 MIM:122000 MIM:148300
MIM:605020 MIM:614195 neXtProt:NX_Q9NZR4 Orphanet:2335
PharmGKB:PA37334 InParanoid:Q9NZR4 PhylomeDB:Q9NZR4
GenomeRNAi:30813 NextBio:52864 Bgee:Q9NZR4 CleanEx:HS_VSX1
Genevestigator:Q9NZR4 GermOnline:ENSG00000100987 Uniprot:Q9NZR4
Length = 365
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 30/104 (28%), Positives = 55/104 (52%)
Query: 62 REEEFDSTKSGSENHEGASGDDQEQRPN---KKKRYHR--HTQHQIQEMEAFFKECPHPD 116
R++ DS + E+ + +D + P +KKR HR T HQ++E+E F E +PD
Sbjct: 131 RQKRSDSVSTSDEDSQSEDRNDLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPD 190
Query: 117 DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTE 160
R+ L+ + L +++ WFQN+R + + + +R + + E
Sbjct: 191 VYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAE 234
>ZFIN|ZDB-GENE-041229-4 [details] [associations]
symbol:pitx3 "paired-like homeodomain transcription
factor 3" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0035270 "endocrine system
development" evidence=IMP] [GO:0021984 "adenohypophysis
development" evidence=IMP] [GO:0043010 "camera-type eye
development" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0002088 "lens development in
camera-type eye" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-041229-4 GO:GO:0005634 GO:GO:0045893
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0021984 GO:GO:0002088 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438 EMBL:AY525643
EMBL:AY639155 EMBL:AY643793 EMBL:CR626878 EMBL:BC094961
IPI:IPI00485762 RefSeq:NP_991238.1 UniGene:Dr.89375
ProteinModelPortal:Q6QU75 SMR:Q6QU75 STRING:Q6QU75
Ensembl:ENSDART00000102538 GeneID:402974 KEGG:dre:402974 CTD:5309
InParanoid:Q6DUF5 KO:K09357 OMA:ASPYMYR OrthoDB:EOG42Z4R4
NextBio:20816783 Bgee:Q6QU75 Uniprot:Q6QU75
Length = 293
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/96 (30%), Positives = 53/96 (55%)
Query: 63 EEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRH-TQHQIQEMEAFFKECPHPDDKQRK 121
++ D+ KS +NH S + K++R H T Q+QE+EA F+ +PD R+
Sbjct: 33 QDNSDTEKS-HQNHTDESNPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTRE 91
Query: 122 ELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
E++ L +V+ WF+N+R + + + ER++ +L
Sbjct: 92 EIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 126
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 30/102 (29%), Positives = 54/102 (52%)
Query: 67 DSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE 126
D + N E DD Q KK+R + Q++ +E F+ + +++ +L+R
Sbjct: 62 DLETGNNMNGEEDYSDDGSQMGEKKRRLN---MEQVKTLEKNFELGNKLEPERKMQLARA 118
Query: 127 LGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
LGL+P Q+ WFQN+R + KT+ + L+ + + L+A+N
Sbjct: 119 LGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAEN 160
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 127 (49.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 89 NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
+ K R + QI+ +E F+ + +++ +L+RELGL+P QV WFQNKR + K++
Sbjct: 28 HNKNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSK 87
Query: 149 HERHENTQLRTENEKL 164
E LR + L
Sbjct: 88 QLETEYNILRQNYDNL 103
Score = 44 (20.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 157 LRTENEKLRADNMRYREALSNASCPN---CGGPTAIGEMSFDEHHLRLENARLR--EEI 210
L+ E + L ++ R +EA + C G A+ +S H E R R EE+
Sbjct: 110 LKKEKQALVSELQRLKEATQKKTQEEERQCSGDQAVVALSSTHHESENEENRRRKPEEV 168
>UNIPROTKB|P31270 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001759 "organ induction" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0060272 "embryonic skeletal joint morphogenesis" evidence=IEA]
[GO:0007501 "mesodermal cell fate specification" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032993 "protein-DNA complex" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0001658 "branching involved
in ureteric bud morphogenesis" evidence=ISS] [GO:0007275
"multicellular organismal development" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] [GO:0010720
"positive regulation of cell development" evidence=ISS] [GO:0030326
"embryonic limb morphogenesis" evidence=ISS] [GO:0032332 "positive
regulation of chondrocyte differentiation" evidence=ISS]
[GO:0048589 "developmental growth" evidence=ISS] [GO:0060351
"cartilage development involved in endochondral bone morphogenesis"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 EMBL:CH471073 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007501
GO:GO:0030326 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 EMBL:AC004080 CTD:3207
eggNOG:NOG274734 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
OMA:GGCRETA GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
EMBL:AF071164 EMBL:AF039307 EMBL:BC040948 IPI:IPI00010754
PIR:S14931 RefSeq:NP_005514.1 UniGene:Hs.249171
ProteinModelPortal:P31270 SMR:P31270 IntAct:P31270 STRING:P31270
PhosphoSite:P31270 DMDM:13124744 PRIDE:P31270 DNASU:3207
Ensembl:ENST00000006015 GeneID:3207 KEGG:hsa:3207 UCSC:uc003syx.3
GeneCards:GC07M027220 HGNC:HGNC:5101 HPA:HPA035623 MIM:142958
MIM:605432 neXtProt:NX_P31270 Orphanet:71289 PharmGKB:PA29378
InParanoid:P31270 OrthoDB:EOG4KKZ3X PhylomeDB:P31270 ChiTaRS:HOXA11
GenomeRNAi:3207 NextBio:12762 Bgee:P31270 CleanEx:HS_HOXA11
Genevestigator:P31270 GermOnline:ENSG00000005073 Uniprot:P31270
Length = 313
Score = 136 (52.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 50 TQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFF 109
T +E + R R E S +S S + E +G QR KK+ +T++QI+E+E F
Sbjct: 203 TAAAAEEKERRRRPESSSSPESSSGHTEDKAGGSSGQRTRKKRC--PYTKYQIRELEREF 260
Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
+ + ++R +LSR L L QVK WFQN+R MK + + Q + N L
Sbjct: 261 FFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRR--MKEKKINRDRLQYYSANPLL 313
Score = 38 (18.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 11 NMPSTIGRNG 20
N ST+GRNG
Sbjct: 125 NFYSTVGRNG 134
>RGD|69253 [details] [associations]
symbol:Pitx1 "paired-like homeodomain 1" species:10116 "Rattus
norvegicus" [GO:0000988 "protein binding transcription factor
activity" evidence=IEA;ISO] [GO:0001501 "skeletal system
development" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:0005634
"nucleus" evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IMP] [GO:0014707
"branchiomeric skeletal muscle development" evidence=IEA;ISO]
[GO:0021983 "pituitary gland development" evidence=IEA;ISO]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA;ISO]
[GO:0035137 "hindlimb morphogenesis" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048625 "myoblast cell fate commitment"
evidence=IEA;ISO] [GO:0051216 "cartilage development"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:69253
GO:GO:0005737 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0051216 GO:GO:0035116 GO:GO:0021983
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000988
GO:GO:0048625 GO:GO:0014707 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 OrthoDB:EOG4R503Q CTD:5307 KO:K09356 OMA:CKNSYLP
EMBL:AB047298 EMBL:BC061966 IPI:IPI00198722 RefSeq:NP_446076.1
UniGene:Rn.74248 ProteinModelPortal:Q99NA7 SMR:Q99NA7 STRING:Q99NA7
Ensembl:ENSRNOT00000015307 GeneID:113983 KEGG:rno:113983
UCSC:RGD:69253 GeneTree:ENSGT00700000104438 InParanoid:Q99NA7
NextBio:618121 Genevestigator:Q99NA7 GermOnline:ENSRNOG00000011423
Uniprot:Q99NA7
Length = 315
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/118 (30%), Positives = 62/118 (52%)
Query: 46 PLDMTQNT-SESEIARLREEEFDS-TKSGSENHEGASGDDQEQRPNKKKRYHRHTQH--- 100
P + +N+ SES A L ++E K + G++G + P KKK+ R H
Sbjct: 39 PREPLENSASESSDADLPDKERGGEAKVPEDGGAGSAGCGSAEDPAKKKKQRRQRTHFTS 98
Query: 101 -QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
Q+QE+EA F+ +PD R+E++ L +V+ WF+N+R + + + ER++ L
Sbjct: 99 QQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWR-KRERNQQLDL 155
>UNIPROTKB|F1N4F7 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035265 "organ growth" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0021587 "cerebellum
morphogenesis" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GO:GO:0008283 GO:GO:0008219
GO:GO:0071542 GO:GO:0043565 GO:GO:0008270 GO:GO:0030199
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901 GO:GO:0035265
GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GeneTree:ENSGT00700000104050 GO:GO:0021587 OMA:NRMEGMM
EMBL:DAAA02032139 IPI:IPI00694069 Ensembl:ENSBTAT00000038767
Uniprot:F1N4F7
Length = 294
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 48 DMTQNTS--ESEIARLREEEFDSTKS-GSENHEGASGDD-QEQRPNKKKRYHRHTQHQIQ 103
D+ + S ES+ + +E+ D + G + SGDD ++ R K+ R TQ Q +
Sbjct: 66 DLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ-QRR 124
Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEK 163
+A F+ P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +++
Sbjct: 125 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQR 184
Query: 164 L 164
L
Sbjct: 185 L 185
>UNIPROTKB|F1RS26 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035265 "organ growth" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0021587 "cerebellum
morphogenesis" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GO:GO:0008283 GO:GO:0008219
GO:GO:0071542 GO:GO:0043565 GO:GO:0008270 GO:GO:0030199
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901 GO:GO:0035265
GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GeneTree:ENSGT00700000104050 GO:GO:0021587 OMA:NRMEGMM
EMBL:CU062602 Ensembl:ENSSSCT00000006164 Uniprot:F1RS26
Length = 294
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 48 DMTQNTS--ESEIARLREEEFDSTKS-GSENHEGASGDD-QEQRPNKKKRYHRHTQHQIQ 103
D+ + S ES+ + +E+ D + G + SGDD ++ R K+ R TQ Q +
Sbjct: 66 DLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ-QRR 124
Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEK 163
+A F+ P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +++
Sbjct: 125 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQR 184
Query: 164 L 164
L
Sbjct: 185 L 185
>UNIPROTKB|E2R5X4 [details] [associations]
symbol:RAX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
CTD:84839 KO:K09333 OMA:SFGPHAF EMBL:AAEX03012573
RefSeq:XP_854816.1 Ensembl:ENSCAFT00000030462 GeneID:612000
KEGG:cfa:612000 NextBio:20897534 Uniprot:E2R5X4
Length = 184
Score = 123 (48.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/91 (34%), Positives = 50/91 (54%)
Query: 66 FDSTKSGSENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKEL 123
F S G G G +E P KK R +R T +Q+ ++E F+ +PD R+EL
Sbjct: 2 FLSPGEGPAAEAGGPGPGEET-PKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREEL 60
Query: 124 SRELGLEPLQVKFWFQNKRTQMKTQHERHEN 154
+ ++ L ++V+ WFQN+R + + Q ER E+
Sbjct: 61 AAKVHLPEVRVQVWFQNRRAKWRRQ-ERLES 90
>UNIPROTKB|Q96IS3 [details] [associations]
symbol:RAX2 "Retina and anterior neural fold homeobox
protein 2" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007601 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Orphanet:1872 GO:GO:0050896
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518 HSSP:P06601
EMBL:AC005777 HOVERGEN:HBG021349 CTD:84839 eggNOG:NOG248147
KO:K09333 OrthoDB:EOG4V4387 EMBL:AY211277 EMBL:BC007284
EMBL:BC018709 EMBL:BC032512 IPI:IPI00063781 RefSeq:NP_116142.1
UniGene:Hs.532691 ProteinModelPortal:Q96IS3 SMR:Q96IS3
STRING:Q96IS3 DMDM:74760880 PRIDE:Q96IS3 Ensembl:ENST00000395106
GeneID:84839 KEGG:hsa:84839 UCSC:uc002lyr.3 GeneCards:GC19M003769
HGNC:HGNC:18286 MIM:610362 MIM:610381 MIM:613757 neXtProt:NX_Q96IS3
PharmGKB:PA162400734 InParanoid:Q96IS3 PhylomeDB:Q96IS3
GenomeRNAi:84839 NextBio:75065 ArrayExpress:Q96IS3 Bgee:Q96IS3
CleanEx:HS_RAX2 Genevestigator:Q96IS3 Uniprot:Q96IS3
Length = 184
Score = 123 (48.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/91 (34%), Positives = 50/91 (54%)
Query: 66 FDSTKSGSENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKEL 123
F S G G G +E P KK R +R T +Q+ ++E F+ +PD R+EL
Sbjct: 2 FLSPGEGPATEGGGLGPGEEA-PKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREEL 60
Query: 124 SRELGLEPLQVKFWFQNKRTQMKTQHERHEN 154
+ ++ L ++V+ WFQN+R + + Q ER E+
Sbjct: 61 AAKVHLPEVRVQVWFQNRRAKWRRQ-ERLES 90
>TAIR|locus:2129136 [details] [associations]
symbol:HB-2 "homeobox protein 2" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010016 "shoot system morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
GO:GO:0010016 Uniprot:Q05466
Length = 284
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 52 NTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKE 111
+T S + E E D+ GS G S D E N +K+ R ++ Q +E FK+
Sbjct: 94 STVSSSTGKRSEREEDTDPQGSR---GIS--DDEDGDNSRKKL-RLSKDQSAILEETFKD 147
Query: 112 CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRY 171
+ KQ++ L+++LGL QV+ WFQN+R + K + + LR E L +N R
Sbjct: 148 HSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRL 207
Query: 172 REALS 176
++ ++
Sbjct: 208 QKEVT 212
>MGI|MGI:107374 [details] [associations]
symbol:Pitx1 "paired-like homeodomain transcription factor 1"
species:10090 "Mus musculus" [GO:0000988 "protein binding
transcription factor activity" evidence=IPI] [GO:0001501 "skeletal
system development" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0014707 "branchiomeric skeletal muscle development"
evidence=IMP] [GO:0021983 "pituitary gland development"
evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IGI] [GO:0035137 "hindlimb morphogenesis"
evidence=IDA;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0048625
"myoblast cell fate commitment" evidence=IMP] [GO:0051216
"cartilage development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:107374 GO:GO:0005737 GO:GO:0005730
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0051216
GO:GO:0035116 GO:GO:0021983 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000988 GO:GO:0048625 GO:GO:0014707
eggNOG:NOG249113 HOGENOM:HOG000273886 HOVERGEN:HBG068770
OrthoDB:EOG4R503Q CTD:5307 KO:K09356 OMA:CKNSYLP EMBL:U54499
EMBL:U71206 EMBL:BC012696 EMBL:U70371 IPI:IPI00108083
RefSeq:NP_035227.1 UniGene:Mm.135195 ProteinModelPortal:P70314
SMR:P70314 STRING:P70314 PhosphoSite:P70314 PRIDE:P70314
Ensembl:ENSMUST00000021968 GeneID:18740 KEGG:mmu:18740
InParanoid:P70314 NextBio:294881 Bgee:P70314 CleanEx:MM_PITX1
Genevestigator:P70314 GermOnline:ENSMUSG00000021506 Uniprot:P70314
Length = 315
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/119 (31%), Positives = 62/119 (52%)
Query: 46 PLDMTQNT-SESEIARLREEEFDSTKSGSEN----HEGASGDDQEQRPNKKKRYHR-H-T 98
P + +N+ SES A L ++E G E+ G G ++ KK+R R H T
Sbjct: 39 PREPLENSASESSDADLPDKERGGEAKGPEDGGAGSAGCGGGAEDPAKKKKQRRQRTHFT 98
Query: 99 QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
Q+QE+EA F+ +PD R+E++ L +V+ WF+N+R + + + ER++ L
Sbjct: 99 SQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWR-KRERNQQLDL 156
>UNIPROTKB|Q9GMA3 [details] [associations]
symbol:VSX1 "Visual system homeobox 1" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060040 "retinal
bipolar neuron differentiation" evidence=IEA] [GO:0042551 "neuron
maturation" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007601 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0050896 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104013 GO:GO:0060040
GO:GO:0042551 eggNOG:NOG237888 HOGENOM:HOG000115909
InterPro:IPR023339 PROSITE:PS51496 EMBL:AF251032 IPI:IPI00716722
RefSeq:NP_777192.1 UniGene:Bt.5555 ProteinModelPortal:Q9GMA3
SMR:Q9GMA3 PRIDE:Q9GMA3 Ensembl:ENSBTAT00000004329 GeneID:286802
KEGG:bta:286802 CTD:30813 HOVERGEN:HBG036251 InParanoid:Q9GMA3
KO:K09335 OMA:WGSDHLK OrthoDB:EOG4907B0 NextBio:20806456
Uniprot:Q9GMA3
Length = 365
Score = 132 (51.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/105 (31%), Positives = 52/105 (49%)
Query: 59 ARLREEEFDSTKSGSENHEGASGDDQEQRPNK-KKRYHR--HTQHQIQEMEAFFKECPHP 115
AR + E ST E S P+K KKR HR T HQ++E+E F E +P
Sbjct: 130 ARQKRSESVSTSDEDSPSEDRSDRKASPAPSKRKKRRHRTVFTAHQLEELEKAFSEAHYP 189
Query: 116 DDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTE 160
D R+ L+ + L +++ WFQN+R + + + +R + + E
Sbjct: 190 DVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAE 234
>UNIPROTKB|F1PP15 [details] [associations]
symbol:RHOXF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0019953
"sexual reproduction" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0019953 OMA:NKRARCR
GeneTree:ENSGT00530000063899 EMBL:AAEX03026834
Ensembl:ENSCAFT00000029306 Uniprot:F1PP15
Length = 182
Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 24/67 (35%), Positives = 45/67 (67%)
Query: 87 RPNKKKRYHRH--TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
+P +++R R+ TQ Q+QE+E+ F+ +PD R+EL+R + + ++V+ WF+N+R +
Sbjct: 96 QPRRRRRAQRNKFTQVQVQELESAFQHTQYPDVLTRQELARRMDVTEIRVQVWFKNRRAK 155
Query: 145 MKTQHER 151
K + ER
Sbjct: 156 YK-RDER 161
>UNIPROTKB|J9NU69 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 OMA:NRMEGMM EMBL:AAEX03006872
EMBL:AAEX03006873 Ensembl:ENSCAFT00000044276 Uniprot:J9NU69
Length = 327
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 48 DMTQNTS--ESEIARLREEEFDSTKS-GSENHEGASGDD-QEQRPNKKKRYHRHTQHQIQ 103
D+ + S ES+ + +E+ D + G + SGDD ++ R K+ R TQ Q +
Sbjct: 106 DLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ-QRR 164
Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEK 163
+A F+ P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +++
Sbjct: 165 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQR 224
Query: 164 L 164
L
Sbjct: 225 L 225
>UNIPROTKB|A6NLW8 [details] [associations]
symbol:DUXA "Double homeobox protein A" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:AC025588
IPI:IPI00556392 RefSeq:NP_001012747.1 UniGene:Hs.585857
ProteinModelPortal:A6NLW8 SMR:A6NLW8 PhosphoSite:A6NLW8
PRIDE:A6NLW8 Ensembl:ENST00000554048 GeneID:503835 KEGG:hsa:503835
UCSC:uc002qoa.1 CTD:503835 GeneCards:GC19M057663 H-InvDB:HIX0016200
HGNC:HGNC:32179 MIM:611168 neXtProt:NX_A6NLW8 PharmGKB:PA142671924
eggNOG:NOG289976 HOGENOM:HOG000112297 InParanoid:A6NLW8 OMA:PGYATKQ
OrthoDB:EOG4N04FW GenomeRNAi:503835 NextBio:112042 Bgee:A6NLW8
CleanEx:HS_DUXA Genevestigator:A6NLW8 Uniprot:A6NLW8
Length = 204
Score = 125 (49.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/120 (25%), Positives = 59/120 (49%)
Query: 60 RLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQ 119
R E +S++S ++ G +E R + Y H + ++AF K P+P
Sbjct: 75 RPEAETLESSQSQGQDQPGVEFQSREAR-RCRTTYSASQLHTL--IKAFMKN-PYPGIDS 130
Query: 120 RKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNAS 179
R+EL++E+G+ +V+ WFQN+R+++ Q +R L E + + ++ E N +
Sbjct: 131 REELAKEIGVPESRVQIWFQNRRSRLLLQRKREPVASLEQEEQGKIPEGLQGAEDTQNGT 190
>UNIPROTKB|G3V877 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0002930 "trabecular meshwork development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0021587 "cerebellum morphogenesis" evidence=IEA]
[GO:0021954 "central nervous system neuron development"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0035265 "organ
growth" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:620843 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:CH474001 OMA:NRMEGMM
UniGene:Rn.92364 Ensembl:ENSRNOT00000022953 Uniprot:G3V877
Length = 372
Score = 132 (51.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 48 DMTQNTS--ESEIARLREEEFDSTKS---GSENHEGASGDDQEQRPNKKKRYHRHTQHQI 102
D+ + S ES+ + +E+ D + GS+N +G+ D ++ R K+ R TQ Q
Sbjct: 151 DLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQN-KGSGDDGKDPRRPKRPRTILTTQ-QR 208
Query: 103 QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENE 162
+ +A F+ P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + ++
Sbjct: 209 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQ 268
Query: 163 KL 164
+L
Sbjct: 269 RL 270
>MGI|MGI:1201673 [details] [associations]
symbol:Shox2 "short stature homeobox 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IMP] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IMP] [GO:0002062 "chondrocyte
differentiation" evidence=IMP] [GO:0002063 "chondrocyte
development" evidence=IMP] [GO:0003170 "heart valve development"
evidence=IMP] [GO:0003209 "cardiac atrium morphogenesis"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IMP]
[GO:0032330 "regulation of chondrocyte differentiation"
evidence=IMP] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045880 "positive regulation of smoothened
signaling pathway" evidence=IMP] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IMP]
[GO:0048598 "embryonic morphogenesis" evidence=IMP] [GO:0048743
"positive regulation of skeletal muscle fiber development"
evidence=IMP] [GO:0050772 "positive regulation of axonogenesis"
evidence=IMP] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IMP] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IMP] [GO:0060415 "muscle
tissue morphogenesis" evidence=IMP] [GO:2000172 "regulation of
branching morphogenesis of a nerve" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:U66918 MGI:MGI:1201673
GO:GO:0005634 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326 GO:GO:0050772
GO:GO:0032330 GO:GO:0001649 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OMA:CTEAGRD
OrthoDB:EOG41C6X2 EMBL:U67055 EMBL:U65071 EMBL:U65072
IPI:IPI00230342 IPI:IPI00625691 RefSeq:NP_038693.1 UniGene:Mm.39093
ProteinModelPortal:P70390 SMR:P70390 STRING:P70390
PhosphoSite:P70390 PRIDE:P70390 Ensembl:ENSMUST00000029422
Ensembl:ENSMUST00000162060 Ensembl:ENSMUST00000162439 GeneID:20429
KEGG:mmu:20429 UCSC:uc008pld.1 UCSC:uc008ple.1 InParanoid:P70390
NextBio:298446 Bgee:P70390 CleanEx:MM_SHOX2 Genevestigator:P70390
GermOnline:ENSMUSG00000027833 GO:GO:0003170 Uniprot:P70390
Length = 331
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 33/107 (30%), Positives = 54/107 (50%)
Query: 47 LDM--TQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQE 104
LDM + + E RL E K ++ +G + Q + ++ R + T Q+ E
Sbjct: 97 LDMGAAERSREPGSPRLTEVS-PELKDRKDDAKGMEDEGQTKIKQRRSRTN-FTLEQLNE 154
Query: 105 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q +
Sbjct: 155 LERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQ 201
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 128 (50.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 75 NHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK-ELSRELGLEPLQ 133
N + DD + KK+R + Q++ +E F E + + RK EL+R LGL+P Q
Sbjct: 56 NGDEEYSDDGSKMGEKKRRLN---MEQLKALEKDF-ELGNKLESDRKLELARALGLQPRQ 111
Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
+ WFQN+R + KT+ + L+ + E LR +N
Sbjct: 112 IAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDEN 146
>FB|FBgn0019650 [details] [associations]
symbol:toy "twin of eyeless" species:7227 "Drosophila
melanogaster" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=IEA;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0035214 "eye-antennal disc
development" evidence=IMP] [GO:0048749 "compound eye development"
evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0016319 "mushroom
body development" evidence=IMP] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] [GO:0008056 "ocellus development" evidence=IGI;IMP]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0016319
EMBL:AE014135 GO:GO:0048749 GO:GO:0048854 HSSP:P26367
GeneTree:ENSGT00680000099553 GO:GO:0008056 FlyBase:FBgn0019650
ChiTaRS:toy EMBL:AY051487 RefSeq:NP_524638.3 UniGene:Dm.1885
SMR:Q9V490 IntAct:Q9V490 MINT:MINT-774624 STRING:Q9V490
EnsemblMetazoa:FBtr0089185 GeneID:43833 KEGG:dme:Dmel_CG11186
UCSC:CG11186-RA CTD:43833 InParanoid:Q9V490 OMA:YMFHDPL
GenomeRNAi:43833 NextBio:836147 Uniprot:Q9V490
Length = 543
Score = 134 (52.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 33/128 (25%), Positives = 59/128 (46%)
Query: 36 PTNMMEGQLHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYH 95
P N+ GQ D+ + + + DST G+ H + +D + R K++
Sbjct: 208 PANL-SGQADRDDVQKRELQFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKLQ 266
Query: 96 RH----TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
R+ + QI +E F+ +PD R+ L+ ++GL +++ WF N+R K + E
Sbjct: 267 RNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRA--KWRREE 324
Query: 152 HENTQLRT 159
TQ R+
Sbjct: 325 KMRTQRRS 332
>UNIPROTKB|F1NPY3 [details] [associations]
symbol:F1NPY3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00650000093445 EMBL:AADN02065142 EMBL:AADN02065141
IPI:IPI00584945 Ensembl:ENSGALT00000030041 OMA:GMIASCE
Uniprot:F1NPY3
Length = 204
Score = 122 (48.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 22/62 (35%), Positives = 42/62 (67%)
Query: 88 PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM-K 146
P KKK ++ Q++E+E F+E +PD+++R+E++ +G+ P ++ WFQN+R + K
Sbjct: 7 PVKKKTRTFYSAEQLEELEKVFQEDRYPDNEKRREIAAVIGVTPQRIMVWFQNRRAKWRK 66
Query: 147 TQ 148
T+
Sbjct: 67 TE 68
Score = 40 (19.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 717 SLLTVAFQILVDSVP-TAK-----LSLGSVATVNNLIA-CTVERIKASLSCE 761
S L + QIL DSVP T + L+L V+ V +IA C + K L +
Sbjct: 87 SSLRLLPQILFDSVPCTCETPINPLNLLLVSPVTGMIASCEAVQTKTLLQLD 138
>UNIPROTKB|E1BNP2 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=ISS] [GO:0048589 "developmental growth"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISS] [GO:0010720 "positive regulation of
cell development" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=ISS] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0032993 "protein-DNA complex" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007501 "mesodermal cell fate specification"
evidence=ISS] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001759 "organ induction"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0030326 GO:GO:0032332 GO:GO:0048589
GO:GO:0009953 GO:GO:0009954 GO:GO:0042733 GO:GO:0001658
GO:GO:0001656 GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 OMA:GGCRETA
GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:DAAA02010937 IPI:IPI00715888
Ensembl:ENSBTAT00000019611 Uniprot:E1BNP2
Length = 315
Score = 134 (52.2 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 38/111 (34%), Positives = 58/111 (52%)
Query: 54 SESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECP 113
+E + R R E S +S S + E +G QR KK+ +T++QI+E+E F
Sbjct: 209 AEEKERRRRPESSSSPESSSGHTEDKAGGSSGQRTRKKRC--PYTKYQIRELEREFFFSV 266
Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
+ + ++R +LSR L L QVK WFQN+R MK + + Q + N L
Sbjct: 267 YINKEKRLQLSRMLNLTDRQVKIWFQNRR--MKEKKINRDRLQYYSANPLL 315
Score = 38 (18.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 11 NMPSTIGRNG 20
N ST+GRNG
Sbjct: 125 NFYSTVGRNG 134
>UNIPROTKB|F1SHT7 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060351 "cartilage development involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042733 "embryonic
digit morphogenesis" evidence=IEA] [GO:0032993 "protein-DNA
complex" evidence=IEA] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IEA] [GO:0010720 "positive
regulation of cell development" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0007501 "mesodermal cell fate specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 OMA:GGCRETA GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 GeneTree:ENSGT00700000104263
EMBL:CU570959 EMBL:CU480612 Ensembl:ENSSSCT00000018179
Uniprot:F1SHT7
Length = 316
Score = 134 (52.2 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 38/111 (34%), Positives = 58/111 (52%)
Query: 54 SESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECP 113
+E + R R E S +S S + E +G QR KK+ +T++QI+E+E F
Sbjct: 210 AEEKERRRRPESSSSPESSSGHTEDKAGGSSGQRTRKKRC--PYTKYQIRELEREFFFSV 267
Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
+ + ++R +LSR L L QVK WFQN+R MK + + Q + N L
Sbjct: 268 YINKEKRLQLSRMLNLTDRQVKIWFQNRR--MKEKKINRDRLQYYSANPLL 316
Score = 38 (18.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 11 NMPSTIGRNG 20
N ST+GRNG
Sbjct: 125 NFYSTVGRNG 134
>MGI|MGI:1100513 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10090 "Mus musculus" [GO:0001764 "neuron migration"
evidence=IMP] [GO:0002930 "trabecular meshwork development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008219 "cell death" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0021587 "cerebellum morphogenesis"
evidence=IMP] [GO:0021954 "central nervous system neuron
development" evidence=IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0030199 "collagen fibril organization"
evidence=IMP] [GO:0030326 "embryonic limb morphogenesis"
evidence=NAS] [GO:0030901 "midbrain development" evidence=IMP]
[GO:0035108 "limb morphogenesis" evidence=IMP] [GO:0035265 "organ
growth" evidence=IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 EMBL:AF078166
MGI:MGI:1100513 GO:GO:0005634 GO:GO:0001764 GO:GO:0046872
GO:GO:0008283 GO:GO:0008219 GO:GO:0071542 GO:GO:0043565
GO:GO:0008270 GO:GO:0030199 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0030326 GO:GO:0030901 GO:GO:0035265 EMBL:CH466542
GO:GO:0009953 GO:GO:0021954 GeneTree:ENSGT00700000104050
GO:GO:0021587 HOGENOM:HOG000231629 eggNOG:NOG243427
HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN CTD:4010
EMBL:AL929212 EMBL:BC119169 EMBL:BC125469 IPI:IPI00132794
RefSeq:NP_034855.2 UniGene:Mm.39825 ProteinModelPortal:O88609
SMR:O88609 STRING:O88609 PhosphoSite:O88609 PRIDE:O88609
Ensembl:ENSMUST00000041730 GeneID:16917 KEGG:mmu:16917
InParanoid:Q0VEN6 OMA:NRMEGMM NextBio:290964 Bgee:O88609
CleanEx:MM_LMX1B Genevestigator:O88609
GermOnline:ENSMUSG00000038765 GO:GO:0002930 Uniprot:O88609
Length = 372
Score = 131 (51.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 48 DMTQNTS--ESEIARLREEEFDSTKS-GSENHEGASGDD-QEQRPNKKKRYHRHTQHQIQ 103
D+ + S ES+ + +E+ D + G + SGDD ++ R K+ R TQ Q +
Sbjct: 151 DLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ-QRR 209
Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEK 163
+A F+ P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +++
Sbjct: 210 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQR 269
Query: 164 L 164
L
Sbjct: 270 L 270
>UNIPROTKB|F1PF43 [details] [associations]
symbol:VAX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0009950 "dorsal/ventral axis specification"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041
GO:GO:0007409 GO:GO:0048048 GO:GO:0000976 GO:GO:0031490
GO:GO:0009950 GeneTree:ENSGT00680000099870 OMA:LGEADHC
EMBL:AAEX03007653 EMBL:AAEX03007652 Ensembl:ENSCAFT00000005524
Uniprot:F1PF43
Length = 247
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 33/105 (31%), Positives = 50/105 (47%)
Query: 87 RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
RP + + T Q+ +E F+ C + ++R EL+R+L L QVK WFQN+RT+ K
Sbjct: 58 RPKRTRT--SFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQK 115
Query: 147 TQHERHENTQLRTE-NEKLRADN-MRYREALSNASCPNCGGPTAI 189
R + +E +E N +R E S P G A+
Sbjct: 116 KDQSRDLEKRTSSEASEAFATSNILRLLEQGRLLSVPRAPGLVAL 160
>UNIPROTKB|O60663 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001701 "in utero embryonic development" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030182 "neuron differentiation" evidence=ISS] [GO:0007275
"multicellular organismal development" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 EMBL:CH471090 GO:GO:0001701
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0009953 HOGENOM:HOG000231629
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN
CTD:4010 EMBL:AF057135 EMBL:AF059575 EMBL:AF059572 EMBL:AF059573
EMBL:AF059574 EMBL:AL161908 EMBL:AL161731 EMBL:BC069601
EMBL:BC112120 EMBL:BC113491 IPI:IPI00030989 IPI:IPI00220363
RefSeq:NP_001167618.1 RefSeq:NP_002307.2 UniGene:Hs.129133
ProteinModelPortal:O60663 SMR:O60663 IntAct:O60663 STRING:O60663
PhosphoSite:O60663 PaxDb:O60663 PRIDE:O60663 DNASU:4010
Ensembl:ENST00000373474 Ensembl:ENST00000425646 GeneID:4010
KEGG:hsa:4010 UCSC:uc004bqj.3 GeneCards:GC09P129376 HGNC:HGNC:6654
MIM:161200 MIM:602575 neXtProt:NX_O60663 Orphanet:2614
PharmGKB:PA30417 InParanoid:O60663 PhylomeDB:O60663 GenomeRNAi:4010
NextBio:15732 ArrayExpress:O60663 Bgee:O60663 CleanEx:HS_LMX1B
Genevestigator:O60663 GermOnline:ENSG00000136944 Uniprot:O60663
Length = 379
Score = 131 (51.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 48 DMTQNTS--ESEIARLREEEFDSTKS-GSENHEGASGDD-QEQRPNKKKRYHRHTQHQIQ 103
D+ + S ES+ + +E+ D + G + SGDD ++ R K+ R TQ Q +
Sbjct: 151 DLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ-QRR 209
Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEK 163
+A F+ P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +++
Sbjct: 210 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQR 269
Query: 164 L 164
L
Sbjct: 270 L 270
>UNIPROTKB|B7ZLH2 [details] [associations]
symbol:LMX1B "LMX1B protein" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002930 "trabecular meshwork development" evidence=IEA]
[GO:0008219 "cell death" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021587 "cerebellum morphogenesis"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0035108 "limb morphogenesis" evidence=IEA]
[GO:0035265 "organ growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 GO:GO:0008283
GO:GO:0008219 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0030199 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901
GO:GO:0035265 GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GO:GO:0021587 HOGENOM:HOG000231629 HOVERGEN:HBG052335 KO:K09371
CTD:4010 EMBL:AL161908 EMBL:AL161731 UniGene:Hs.129133 DNASU:4010
GeneID:4010 KEGG:hsa:4010 HGNC:HGNC:6654 PharmGKB:PA30417
GenomeRNAi:4010 NextBio:15732 EMBL:BC143801 IPI:IPI00956472
RefSeq:NP_001167617.1 SMR:B7ZLH2 STRING:B7ZLH2
Ensembl:ENST00000561065 Uniprot:B7ZLH2
Length = 383
Score = 131 (51.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 48 DMTQNTS--ESEIARLREEEFDSTKS-GSENHEGASGDD-QEQRPNKKKRYHRHTQHQIQ 103
D+ + S ES+ + +E+ D + G + SGDD ++ R K+ R TQ Q +
Sbjct: 151 DLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ-QRR 209
Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEK 163
+A F+ P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +++
Sbjct: 210 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQR 269
Query: 164 L 164
L
Sbjct: 270 L 270
>UNIPROTKB|E2R114 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
CTD:3207 KO:K09296 OMA:GGCRETA InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:AAEX03009390
RefSeq:XP_003431971.2 Ensembl:ENSCAFT00000004754 GeneID:100683897
KEGG:cfa:100683897 Uniprot:E2R114
Length = 327
Score = 134 (52.2 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 38/111 (34%), Positives = 58/111 (52%)
Query: 54 SESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECP 113
+E + R R E S +S S + E +G QR KK+ +T++QI+E+E F
Sbjct: 221 AEEKERRRRPESSSSPESSSGHTEDKAGGSSGQRTRKKRC--PYTKYQIRELEREFFFSV 278
Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
+ + ++R +LSR L L QVK WFQN+R MK + + Q + N L
Sbjct: 279 YINKEKRLQLSRMLNLTDRQVKIWFQNRR--MKEKKINRDRLQYYSANPLL 327
Score = 38 (18.4 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 11 NMPSTIGRNG 20
N ST+GRNG
Sbjct: 126 NFYSTVGRNG 135
>UNIPROTKB|F8VYP0 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 KO:K09371 CTD:4010 EMBL:AL161908 EMBL:AL161731
IPI:IPI00220363 RefSeq:NP_002307.2 UniGene:Hs.129133 DNASU:4010
GeneID:4010 KEGG:hsa:4010 HGNC:HGNC:6654 GenomeRNAi:4010
NextBio:15732 ProteinModelPortal:F8VYP0 SMR:F8VYP0 PRIDE:F8VYP0
Ensembl:ENST00000526117 UCSC:uc004bqi.3 ArrayExpress:F8VYP0
Bgee:F8VYP0 Uniprot:F8VYP0
Length = 395
Score = 131 (51.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 48 DMTQNTS--ESEIARLREEEFDSTKS-GSENHEGASGDD-QEQRPNKKKRYHRHTQHQIQ 103
D+ + S ES+ + +E+ D + G + SGDD ++ R K+ R TQ Q +
Sbjct: 174 DLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ-QRR 232
Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEK 163
+A F+ P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +++
Sbjct: 233 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQR 292
Query: 164 L 164
L
Sbjct: 293 L 293
>UNIPROTKB|H0YJC8 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC008406
HGNC:HGNC:9004 ChiTaRS:PITX1 Ensembl:ENST00000503586 Uniprot:H0YJC8
Length = 208
Score = 124 (48.7 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 30/101 (29%), Positives = 52/101 (51%)
Query: 61 LREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQH----QIQEMEAFFKECPHPD 116
L++E K ++ G +G P KKK+ R H Q+QE+EA F+ +PD
Sbjct: 97 LKKERGGEPKGPEDSGAGGTGCGGADDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPD 156
Query: 117 DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
R+E++ L +V+ WF+N+R + + + ER++ L
Sbjct: 157 MSMREEIAVWTNLTEPRVRVWFKNRRAKWR-KRERNQQLDL 196
>UNIPROTKB|G3V2N9 [details] [associations]
symbol:NOBOX "Homeobox protein NOBOX" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC004534 HGNC:HGNC:22448
ProteinModelPortal:G3V2N9 SMR:G3V2N9 Ensembl:ENST00000555556
ArrayExpress:G3V2N9 Bgee:G3V2N9 Uniprot:G3V2N9
Length = 166
Score = 117 (46.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 20/74 (27%), Positives = 43/74 (58%)
Query: 73 SENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPL 132
++N + G + +KK + Q++E+E F+E +PD +R+E+++ +G+ P
Sbjct: 44 NQNRDHKQGPPEVTCQIRKKTRTLYRSDQLEELEKIFQEDHYPDSDKRREIAQTVGVTPQ 103
Query: 133 QVKFWFQNKRTQMK 146
++ WFQN+R + +
Sbjct: 104 RIMVWFQNRRAKWR 117
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 109 (43.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 27/85 (31%), Positives = 46/85 (54%)
Query: 77 EGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKF 136
E +G+ + +KKR +T+HQ E+E F + ++R E+S+ + L QVK
Sbjct: 9 ENTTGNWLTAKSGRKKRCP-YTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKI 67
Query: 137 WFQNKRTQMKTQHERHENTQLRTEN 161
WFQN+R ++K + + +L T N
Sbjct: 68 WFQNRRMKLKKMNRENRIREL-TSN 91
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 109 (43.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 27/85 (31%), Positives = 46/85 (54%)
Query: 77 EGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKF 136
E +G+ + +KKR +T+HQ E+E F + ++R E+S+ + L QVK
Sbjct: 13 ENTTGNWLTAKSGRKKRCP-YTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKI 71
Query: 137 WFQNKRTQMKTQHERHENTQLRTEN 161
WFQN+R ++K + + +L T N
Sbjct: 72 WFQNRRMKLKKMNRENRIREL-TSN 95
>UNIPROTKB|F8W7W6 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002930 "trabecular meshwork development" evidence=IEA]
[GO:0008219 "cell death" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021587 "cerebellum morphogenesis"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0035108 "limb morphogenesis" evidence=IEA]
[GO:0035265 "organ growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 GO:GO:0008283
GO:GO:0008219 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0030199 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901
GO:GO:0035265 GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GO:GO:0021587 KO:K09371 CTD:4010 EMBL:AL161908 EMBL:AL161731
UniGene:Hs.129133 DNASU:4010 GeneID:4010 KEGG:hsa:4010
HGNC:HGNC:6654 GenomeRNAi:4010 NextBio:15732 OMA:NRMEGMM
IPI:IPI00956472 RefSeq:NP_001167617.1 ProteinModelPortal:F8W7W6
SMR:F8W7W6 Ensembl:ENST00000355497 UCSC:uc011maa.2
ArrayExpress:F8W7W6 Bgee:F8W7W6 Uniprot:F8W7W6
Length = 406
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 48 DMTQNTS--ESEIARLREEEFDSTKS-GSENHEGASGDD-QEQRPNKKKRYHRHTQHQIQ 103
D+ + S ES+ + +E+ D + G + SGDD ++ R K+ R TQ Q +
Sbjct: 174 DLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ-QRR 232
Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEK 163
+A F+ P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +++
Sbjct: 233 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQR 292
Query: 164 L 164
L
Sbjct: 293 L 293
>MGI|MGI:1918847 [details] [associations]
symbol:Isx "intestine specific homeobox" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:1901738 "regulation of vitamin A metabolic process"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:1918847 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104256 CTD:91464 eggNOG:NOG252360
HOGENOM:HOG000052524 HOVERGEN:HBG096596 OrthoDB:EOG4PZJ7F
EMBL:AK018615 EMBL:BC128289 EMBL:BC128290 IPI:IPI00316540
IPI:IPI00850211 RefSeq:NP_082113.2 UniGene:Mm.158735
ProteinModelPortal:A1A546 SMR:A1A546 STRING:A1A546
PhosphoSite:A1A546 PRIDE:A1A546 Ensembl:ENSMUST00000034034
Ensembl:ENSMUST00000174427 GeneID:71597 KEGG:mmu:71597
UCSC:uc012ggb.1 InParanoid:A1A546 OMA:CEAPENL NextBio:334069
Bgee:A1A546 CleanEx:MM_ISX Genevestigator:A1A546 Uniprot:A1A546
Length = 240
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 26/89 (29%), Positives = 46/89 (51%)
Query: 62 REEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK 121
+E+ +T GS+ QE++ NK++ T Q+QE+E F +PD R
Sbjct: 50 KEDSRQTTIPGSKLERPPQDQPQEEKKNKRRVRTTFTTEQLQELEKLFHFTHYPDIHVRS 109
Query: 122 ELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
+L+ + L +V+ WFQN+R + + Q +
Sbjct: 110 QLASRINLPEARVQIWFQNQRAKWRKQEK 138
>POMBASE|SPBC21B10.13c [details] [associations]
symbol:yox1 "MBF complex negative regulatory component
Yox1" species:4896 "Schizosaccharomyces pombe" [GO:0000083
"regulation of transcription involved in G1/S phase of mitotic cell
cycle" evidence=IC;TAS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IC;IMP] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;IPI]
[GO:0030907 "MBF transcription complex" evidence=NAS] [GO:0043565
"sequence-specific DNA binding" evidence=ISM] [GO:0071276 "cellular
response to cadmium ion" evidence=IMP] [GO:0071585 "detoxification
of cadmium ion" evidence=IMP] [GO:0071930 "negative regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IMP] [GO:0071931 "positive regulation of transcription
involved in G1/S phase of mitotic cell cycle" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 PomBase:SPBC21B10.13c EMBL:CU329671 GO:GO:0071276
GO:GO:0071585 GO:GO:0001078 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000978 GO:GO:0030907 GO:GO:0071931 eggNOG:COG5576
GO:GO:0071930 EMBL:L14773 OrthoDB:EOG4NKG55 PIR:S50010
RefSeq:NP_595674.1 ProteinModelPortal:P40923 STRING:P40923
EnsemblFungi:SPBC21B10.13c.1 GeneID:2540309 KEGG:spo:SPBC21B10.13c
NextBio:20801438 Uniprot:P40923
Length = 201
Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 31/94 (32%), Positives = 52/94 (55%)
Query: 75 NHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL--GLEPL 132
N+E + +D+E ++KKR R T + +E +F + P P +R+ELS++L + P
Sbjct: 20 NNEAKNHEDEET--HQKKRRRRTTDAEATLLEQYFLKTPKPSLIERQELSKKLKSSMTPR 77
Query: 133 QVKFWFQNKRTQMKTQHERHENTQLRT-ENEKLR 165
+++ WFQNKR ++ + N T EN LR
Sbjct: 78 ELQIWFQNKRQSLRRSNCLSRNRLEGTGENSLLR 111
>ZFIN|ZDB-GENE-040426-1457 [details] [associations]
symbol:shox2 "short stature homeobox 2"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007507 "heart
development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-040426-1457 GO:GO:0005634 GO:GO:0007507 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 HSSP:P06601 CTD:6474 eggNOG:NOG113578
HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2 EMBL:BX004974
EMBL:BC056324 EMBL:BC065345 IPI:IPI00491363 RefSeq:NP_957490.1
UniGene:Dr.26980 SMR:Q7SZN8 Ensembl:ENSDART00000009564
GeneID:394171 KEGG:dre:394171 InParanoid:Q7SZN8 NextBio:20815116
Uniprot:Q7SZN8
Length = 299
Score = 128 (50.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 82 DDQEQRPNKKKRYHRH-TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
+D+ Q K++R + T Q+ E+E F E +PD R+ELS+ LGL +V+ WFQN
Sbjct: 99 EDETQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQN 158
Query: 141 KRTQMKTQHER 151
+R + + Q +
Sbjct: 159 RRAKCRKQENQ 169
>TAIR|locus:2115215 [details] [associations]
symbol:HB40 "homeobox protein 40" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0006950 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL161589 GO:GO:0000976
KO:K09338 HSSP:P10037 HOGENOM:HOG000034122 EMBL:Z99708
EMBL:BX827896 IPI:IPI00520900 PIR:H85433 RefSeq:NP_195392.2
UniGene:At.50404 ProteinModelPortal:O23208 SMR:O23208 PRIDE:O23208
EnsemblPlants:AT4G36740.1 GeneID:829827 KEGG:ath:AT4G36740
GeneFarm:3980 TAIR:At4g36740 eggNOG:NOG244411 InParanoid:O23208
OMA:NSYIDEA PhylomeDB:O23208 Genevestigator:O23208 Uniprot:O23208
Length = 216
Score = 124 (48.7 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 37/129 (28%), Positives = 62/129 (48%)
Query: 43 QLHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQI 102
QL+P TQ E+ + + TK + +G +G +KR + T Q+
Sbjct: 15 QLYPDVYTQIVQPGEVKQPKRRR-KKTKGSVASADGGNG-------LFRKR--KLTDEQV 64
Query: 103 QEMEAFFKECPHPDDKQRKE-LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTEN 161
+E F + H + +RK+ L+ ELGL+P QV WFQN+R + K + E +L+ +
Sbjct: 65 NMLEMSFGD-EHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNSH 123
Query: 162 EKLRADNMR 170
+ + D R
Sbjct: 124 DNVVVDKCR 132
>UNIPROTKB|O75364 [details] [associations]
symbol:PITX3 "Pituitary homeobox 3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0048666 "neuron development" evidence=IEA] [GO:0070306 "lens
fiber cell differentiation" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0071542 "dopaminergic neuron
differentiation" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0030901 "midbrain
development" evidence=ISS] [GO:0002088 "lens development in
camera-type eye" evidence=ISS] [GO:0002089 "lens morphogenesis in
camera-type eye" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=TAS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 GO:GO:0071542 GO:GO:0043565
GO:GO:0007626 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 Orphanet:98993 GO:GO:0002089
MIM:604219 GO:GO:0070306 EMBL:AL160011 MIM:107250 Orphanet:88632
eggNOG:NOG249113 HOGENOM:HOG000273886 HOVERGEN:HBG068770 CTD:5309
KO:K09357 EMBL:AF041339 EMBL:BC011642 IPI:IPI00025313
RefSeq:NP_005020.1 UniGene:Hs.137568 ProteinModelPortal:O75364
SMR:O75364 STRING:O75364 PhosphoSite:O75364 PRIDE:O75364 DNASU:5309
Ensembl:ENST00000370002 Ensembl:ENST00000539804 GeneID:5309
KEGG:hsa:5309 UCSC:uc001kuu.1 GeneCards:GC10M103979 HGNC:HGNC:9006
HPA:HPA044639 MIM:602669 MIM:610623 neXtProt:NX_O75364 Orphanet:162
PharmGKB:PA33340 InParanoid:O75364 OMA:LCKGGFA OrthoDB:EOG45QHG0
PhylomeDB:O75364 GenomeRNAi:5309 NextBio:20526 Bgee:O75364
CleanEx:HS_PITX3 CleanEx:HS_PTX3 Genevestigator:O75364
GermOnline:ENSG00000107859 Uniprot:O75364
Length = 302
Score = 128 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 28/95 (29%), Positives = 53/95 (55%)
Query: 63 EEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE 122
+E DS K+ + G+ D ++ +++R H T Q+QE+EA F+ +PD R+E
Sbjct: 36 QEHSDSEKASASLPGGSPEDGSLKKKQRRQRTH-FTSQQLQELEATFQRNRYPDMSTREE 94
Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
++ L +V+ WF+N+R + + + ER + +L
Sbjct: 95 IAVWTNLTEARVRVWFKNRRAKWR-KRERSQQAEL 128
>MGI|MGI:1100498 [details] [associations]
symbol:Pitx3 "paired-like homeodomain transcription factor
3" species:10090 "Mus musculus" [GO:0002088 "lens development in
camera-type eye" evidence=IMP] [GO:0002089 "lens morphogenesis in
camera-type eye" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0010468 "regulation of gene expression"
evidence=IDA] [GO:0030901 "midbrain development" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048666 "neuron development" evidence=IMP]
[GO:0070306 "lens fiber cell differentiation" evidence=IMP]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IDA;IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1100498 GO:GO:0005634
GO:GO:0045893 GO:GO:0071542 GO:GO:0043565 GO:GO:0007626
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0048666 GO:GO:0030901 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0002089 GO:GO:0070306 eggNOG:NOG249113
HOGENOM:HOG000273886 HOVERGEN:HBG068770
GeneTree:ENSGT00700000104438 CTD:5309 KO:K09357 OMA:LCKGGFA
OrthoDB:EOG45QHG0 EMBL:AF005772 EMBL:BC120844 EMBL:BC137810
IPI:IPI00127700 RefSeq:NP_032878.1 UniGene:Mm.6255
ProteinModelPortal:O35160 SMR:O35160 STRING:O35160
PhosphoSite:O35160 PRIDE:O35160 Ensembl:ENSMUST00000026259
GeneID:18742 KEGG:mmu:18742 UCSC:uc008hsl.1 InParanoid:Q0VB03
ChiTaRS:PITX3 NextBio:294893 Bgee:O35160 CleanEx:MM_PITX3
Genevestigator:O35160 GermOnline:ENSMUSG00000025229 Uniprot:O35160
Length = 302
Score = 128 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 28/95 (29%), Positives = 53/95 (55%)
Query: 63 EEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE 122
+E DS K+ + G+ D ++ +++R H T Q+QE+EA F+ +PD R+E
Sbjct: 36 QEHSDSEKASASLPGGSPEDGSLKKKQRRQRTH-FTSQQLQELEATFQRNRYPDMSTREE 94
Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
++ L +V+ WF+N+R + + + ER + +L
Sbjct: 95 IAVWTNLTEARVRVWFKNRRAKWR-KRERSQQAEL 128
>RGD|3332 [details] [associations]
symbol:Pitx3 "paired-like homeodomain 3" species:10116 "Rattus
norvegicus" [GO:0002088 "lens development in camera-type eye"
evidence=ISO;ISS] [GO:0002089 "lens morphogenesis in camera-type eye"
evidence=ISO;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0007626 "locomotory behavior"
evidence=IEA;ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0030901 "midbrain development" evidence=ISO;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0048666 "neuron development" evidence=IEA;ISO]
[GO:0070306 "lens fiber cell differentiation" evidence=IEA;ISO]
[GO:0071542 "dopaminergic neuron differentiation" evidence=ISO;ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3332 GO:GO:0005634 GO:GO:0045893
GO:GO:0071542 GO:GO:0043565 GO:GO:0007626 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0002089
GO:GO:0070306 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438 CTD:5309 KO:K09357
OMA:LCKGGFA OrthoDB:EOG45QHG0 EMBL:AJ011005 IPI:IPI00197341
RefSeq:NP_062120.1 UniGene:Rn.22092 ProteinModelPortal:P81062
SMR:P81062 STRING:P81062 PhosphoSite:P81062
Ensembl:ENSRNOT00000026013 GeneID:29609 KEGG:rno:29609 UCSC:RGD:3332
InParanoid:P81062 NextBio:609786 Genevestigator:P81062
GermOnline:ENSRNOG00000019194 Uniprot:P81062
Length = 302
Score = 128 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 28/95 (29%), Positives = 53/95 (55%)
Query: 63 EEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE 122
+E DS K+ + G+ D ++ +++R H T Q+QE+EA F+ +PD R+E
Sbjct: 36 QEHSDSEKASASLPGGSPEDGSLKKKQRRQRTH-FTSQQLQELEATFQRNRYPDMSTREE 94
Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
++ L +V+ WF+N+R + + + ER + +L
Sbjct: 95 IAVWTNLTEARVRVWFKNRRAKWR-KRERSQQAEL 128
>UNIPROTKB|F1P4U7 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
Length = 109
Score = 108 (43.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 33/103 (32%), Positives = 55/103 (53%)
Query: 63 EEEFDSTKSGSENHEG---ASGDDQEQRPNK-KKRYHRHTQHQIQEMEAFFKECPHPDDK 118
+E+ +T SG+ + G A + P + +K+ +T++QI+E+E F + + +
Sbjct: 6 QEKKVTTASGAASPPGEAVAEKSNSSAVPQRSRKKRCPYTKYQIRELEREFFFNVYINKE 65
Query: 119 QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTEN 161
+R +LSR L L QVK WFQN+R MK + + Q T N
Sbjct: 66 KRLQLSRMLNLTDRQVKIWFQNRR--MKEKKLNRDRLQYFTGN 106
>RGD|1586239 [details] [associations]
symbol:LOC691272 "similar to reproductive homeobox on X
chromosome, 11" species:10116 "Rattus norvegicus" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071 SMART:SM00389
RGD:1586239 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00530000063899
IPI:IPI00387867 Ensembl:ENSRNOT00000064531 Uniprot:F1M6S5
Length = 96
Score = 108 (43.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 19/53 (35%), Positives = 35/53 (66%)
Query: 99 QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
Q Q+ E++ F+E +PD QRKEL++ + +E VK WF +R +++ +H++
Sbjct: 21 QEQLLELDRVFEETQYPDALQRKELAKLINVEEYTVKIWFNKRRAKIR-KHQK 72
>WB|WBGene00000445 [details] [associations]
symbol:ceh-22 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0043282 "pharyngeal muscle
development" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0006898 GO:GO:0040010 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:Z73974 GO:GO:0043282
EMBL:U10080 EMBL:U10081 PIR:T21552 RefSeq:NP_001076742.1
UniGene:Cel.19760 ProteinModelPortal:P41936 SMR:P41936
STRING:P41936 PaxDb:P41936 GeneID:179485 KEGG:cel:CELE_F29F11.5
UCSC:F29F11.5a CTD:179485 WormBase:F29F11.5a eggNOG:NOG310976
HOGENOM:HOG000217930 InParanoid:P41936 NextBio:905598
ArrayExpress:P41936 Uniprot:P41936
Length = 346
Score = 128 (50.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 35/111 (31%), Positives = 55/111 (49%)
Query: 50 TQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFF 109
T N ++S+ ++ E+ D EN E DD + K+KR T+ Q E+E F
Sbjct: 152 TSNGNKSDKDGIKLEDEDEILEDEENDEE---DDGTGKRKKRKRRVLFTKAQTYELERRF 208
Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH-ERHENTQLRT 159
+ + +R+ L+ ++ L P QVK WFQN R + K H ++ N L T
Sbjct: 209 RSQKYLSAPEREALAMQIRLTPTQVKIWFQNHRYKTKKSHTDKPINAALLT 259
>WB|WBGene00000434 [details] [associations]
symbol:ceh-9 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104206 EMBL:FO081483
EMBL:X52811 PIR:S13129 RefSeq:NP_001021797.1 UniGene:Cel.30778
ProteinModelPortal:P56407 SMR:P56407 EnsemblMetazoa:Y65B4BR.9
GeneID:267057 KEGG:cel:CELE_Y65B4BR.9 UCSC:Y65B4BR.9 CTD:267057
WormBase:Y65B4BR.9 eggNOG:NOG237842 InParanoid:P56407 OMA:FSGKQVF
NextBio:953494 Uniprot:P56407
Length = 147
Score = 107 (42.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 64 EEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKEL 123
+EF KS + + S ++ Q+ +KK + Q+ E+E F+ + R EL
Sbjct: 45 DEFGRCKSSLDQAK-ESPIEKCQKTKRKKARTTFSGKQVFELEKQFEAKKYLSSSDRSEL 103
Query: 124 SRELGLEPLQVKFWFQNKRTQMKTQHERHENT 155
++ L + QVK WFQN+RT+ K E +
Sbjct: 104 AKRLDVTETQVKIWFQNRRTKWKKIESEKERS 135
>WB|WBGene00000452 [details] [associations]
symbol:ceh-31 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG263484 EMBL:FO080757
GeneTree:ENSGT00700000104454 HOGENOM:HOG000020180 PIR:T25611
RefSeq:NP_508525.3 ProteinModelPortal:Q22910 SMR:Q22910
PaxDb:Q22910 EnsemblMetazoa:C33D12.1 GeneID:191621
KEGG:cel:CELE_C33D12.1 UCSC:C33D12.1 CTD:191621 WormBase:C33D12.1
InParanoid:Q22910 OMA:MELAHRM NextBio:949710 Uniprot:Q22910
Length = 260
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 34/108 (31%), Positives = 53/108 (49%)
Query: 44 LHPLDMTQNTSESEIARLREEEFDST-KSGSENHEGASGDDQEQRPNKKKRYHR--HTQH 100
L P + N + + E S+ + GS N E + + +KK R R T
Sbjct: 45 LDPTSHSTNEPDPSPTSINSSESPSSPRIGSPNTERSVNESPTCVGSKKARKARTIFTDK 104
Query: 101 QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
Q+QE+E F++ + + R EL+ +GL QVK W+QN+RT+ K Q
Sbjct: 105 QLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTWYQNRRTKWKRQ 152
>FB|FBgn0085396 [details] [associations]
symbol:CG34367 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:AE014134 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 GeneTree:ENSGT00700000104279
UniGene:Dm.26780 GeneID:5740879 KEGG:dme:Dmel_CG34367
FlyBase:FBgn0085396 GenomeRNAi:5740879 NextBio:20891918
RefSeq:NP_001097140.1 ProteinModelPortal:A8DYR8 SMR:A8DYR8
EnsemblMetazoa:FBtr0112592 UCSC:CG34367-RC InParanoid:A8DYR8
OrthoDB:EOG4M640D PhylomeDB:A8DYR8 Bgee:A8DYR8 Uniprot:A8DYR8
Length = 420
Score = 129 (50.5 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 38/126 (30%), Positives = 60/126 (47%)
Query: 35 QPTNMMEGQLHPLDMTQNTSESEIARLREE-----EFDSTKSGSENHEGASGDDQEQRPN 89
QP + L +T+ T +S +L + E + S N E D
Sbjct: 131 QPEDPKMSGLPTASITECTEDSNTPKLAPDKPLLPEECVSPEPSRNREHCDPLDTSLVNT 190
Query: 90 KKKRYHRH-TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
K++R + T Q+ E+E F+E +PD R+ELS+ LGL +V+ WFQN+R + +
Sbjct: 191 KQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR-- 248
Query: 149 HERHEN 154
+HEN
Sbjct: 249 --KHEN 252
>ZFIN|ZDB-GENE-041014-332 [details] [associations]
symbol:lmx1a "LIM homeobox transcription factor 1,
alpha" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-041014-332 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
HOGENOM:HOG000231629 CTD:4009 HOVERGEN:HBG052335 EMBL:BX296562
IPI:IPI00496510 RefSeq:NP_001020669.1 UniGene:Dr.108111
Ensembl:ENSDART00000019059 GeneID:558036 KEGG:dre:558036
eggNOG:NOG302270 InParanoid:Q5RI65 OMA:RLYSMQD OrthoDB:EOG4P8FJW
NextBio:20882278 Uniprot:Q5RI65
Length = 366
Score = 128 (50.1 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 44/161 (27%), Positives = 75/161 (46%)
Query: 50 TQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFF 109
+ ++ +SE ++ D+ K+ E++ +GD + +RP K+ R TQ Q + +A F
Sbjct: 149 SSDSGKSEDIEEDNDDEDNLKTAGESN--ITGDVEHKRP-KRPRTILTTQ-QRRAFKASF 204
Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNM 169
+ P K R+ L+ E GL V+ WFQN+R +MK R + + ++ R
Sbjct: 205 EVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLVRRQQQQKQTVCPQEKRESPS 264
Query: 170 RYREALSNASCP---NCGG--PTAIGEMSFDEHHLRLENAR 205
+ A S + P C G P +S D L+L+ R
Sbjct: 265 QQHTATSCGALPVELECAGSYPLPQQNLSLDSQSLKLDPFR 305
>UNIPROTKB|F1S8T0 [details] [associations]
symbol:PITX3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0070306
"lens fiber cell differentiation" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0002089 "lens morphogenesis in camera-type eye"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045893 GO:GO:0071542
GO:GO:0043565 GO:GO:0007626 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0002089 GO:GO:0070306
GeneTree:ENSGT00700000104438 OMA:LCKGGFA EMBL:CU407032
Ensembl:ENSSSCT00000011571 Uniprot:F1S8T0
Length = 299
Score = 128 (50.1 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 28/95 (29%), Positives = 53/95 (55%)
Query: 63 EEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE 122
+E DS K+ + G+ D ++ +++R H T Q+QE+EA F+ +PD R+E
Sbjct: 36 QEHSDSEKASASLPGGSPEDGSLKKKQRRQRTH-FTSQQLQELEATFQRNRYPDMSTREE 94
Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
++ L +V+ WF+N+R + + + ER + +L
Sbjct: 95 IAVWTNLTEARVRVWFKNRRAKWR-KRERSQQAEL 128
Score = 40 (19.1 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 16/56 (28%), Positives = 22/56 (39%)
Query: 530 LAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATS 585
LA + V S + ++AS + GT + PG PP V S A S
Sbjct: 182 LASQPVFSPPSSIAASMVPSAAAAPGT-VPGPGALQGLGGGPPGLPPAAVSSGAVS 236
>UNIPROTKB|J9NTV2 [details] [associations]
symbol:J9NTV2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 OMA:IVHFGCC EMBL:AAEX03000743
GeneTree:ENSGT00640000091698 Ensembl:ENSCAFT00000043913
Uniprot:J9NTV2
Length = 184
Score = 119 (46.9 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 24/94 (25%), Positives = 52/94 (55%)
Query: 78 GASGDD----QEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
G SG D + Q+ +++KR T+ Q+ ++E F + P+P+ ++E++ +L + P
Sbjct: 8 GTSGTDLSKGKHQKHSQRKRT-MFTEKQLADLECLFSKNPYPNPSLQREMASKLEIHPTV 66
Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRAD 167
++ WF+N R ++K ++ +++T K D
Sbjct: 67 LQVWFKNHRAKLKKAKQQLSAMEVKTSYSKRNTD 100
>UNIPROTKB|F1NDZ5 [details] [associations]
symbol:LMX1B "LIM/homeobox protein LMX-1.2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002930 "trabecular meshwork
development" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0021587
"cerebellum morphogenesis" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0030199
"collagen fibril organization" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0035108 "limb morphogenesis"
evidence=IEA] [GO:0035265 "organ growth" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0008283 GO:GO:0008219 GO:GO:0043565
GO:GO:0008270 GO:GO:0030199 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0035265
GeneTree:ENSGT00700000104050 IPI:IPI00599399 OMA:NRMEGMM
EMBL:AADN02026296 EMBL:AADN02026297 EMBL:AADN02026298
EMBL:AADN02031658 Ensembl:ENSGALT00000001376 Uniprot:F1NDZ5
Length = 377
Score = 128 (50.1 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 39/138 (28%), Positives = 68/138 (49%)
Query: 48 DMTQNTS--ESEIARLREEEFDSTKSGSENHEGASGDD-QEQRPNKKKRYHRHTQHQIQE 104
D+ + S +S+ + +E+ D + + +G DD ++ R K+ R TQ Q +
Sbjct: 151 DLLSSVSPDDSDSVKSDDEDGDVKPTKGQVTQGKGSDDGKDPRRPKRPRTILTTQ-QRRA 209
Query: 105 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
+A F+ P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +++L
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRL 269
Query: 165 RADNMRYR-EALSNASCP 181
+ M R E + + P
Sbjct: 270 GQEVMSNRMEGMMTSYTP 287
>UNIPROTKB|P53413 [details] [associations]
symbol:LMX1B "LIM/homeobox protein LMX-1.2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 HOGENOM:HOG000231629
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN
EMBL:L39880 EMBL:U41823 IPI:IPI00599399 RefSeq:NP_990689.1
UniGene:Gga.758 ProteinModelPortal:P53413 STRING:P53413
GeneID:396312 KEGG:gga:396312 CTD:4010 InParanoid:P53413
NextBio:20816360 Uniprot:P53413
Length = 377
Score = 128 (50.1 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 39/138 (28%), Positives = 68/138 (49%)
Query: 48 DMTQNTS--ESEIARLREEEFDSTKSGSENHEGASGDD-QEQRPNKKKRYHRHTQHQIQE 104
D+ + S +S+ + +E+ D + + +G DD ++ R K+ R TQ Q +
Sbjct: 151 DLLSSVSPDDSDSVKSDDEDGDVKPTKGQVTQGKGSDDGKDPRRPKRPRTILTTQ-QRRA 209
Query: 105 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
+A F+ P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +++L
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRL 269
Query: 165 RADNMRYR-EALSNASCP 181
+ M R E + + P
Sbjct: 270 GQEVMSNRMEGMMTSYTP 287
>UNIPROTKB|G3V243 [details] [associations]
symbol:RAX2 "Retina and anterior neural fold homeobox like
1" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CH471139 EMBL:AC005777
OMA:SFGPHAF UniGene:Hs.532691 HGNC:HGNC:18286
ProteinModelPortal:G3V243 SMR:G3V243 Ensembl:ENST00000555633
ArrayExpress:G3V243 Bgee:G3V243 Uniprot:G3V243
Length = 230
Score = 123 (48.4 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 31/91 (34%), Positives = 50/91 (54%)
Query: 66 FDSTKSGSENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKEL 123
F S G G G +E P KK R +R T +Q+ ++E F+ +PD R+EL
Sbjct: 48 FLSPGEGPATEGGGLGPGEEA-PKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREEL 106
Query: 124 SRELGLEPLQVKFWFQNKRTQMKTQHERHEN 154
+ ++ L ++V+ WFQN+R + + Q ER E+
Sbjct: 107 AAKVHLPEVRVQVWFQNRRAKWRRQ-ERLES 136
>TAIR|locus:2049614 [details] [associations]
symbol:HB17 "homeobox-leucine zipper protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
Uniprot:Q8S9N6
Length = 275
Score = 125 (49.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 38/134 (28%), Positives = 60/134 (44%)
Query: 60 RLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQ 119
RL S++ G + E S DD P KK R T+ Q + +E F++ + KQ
Sbjct: 111 RLDMNRLPSSEDGDD--EEFSHDDGSAPPRKKLRL---TREQSRLLEDSFRQNHTLNPKQ 165
Query: 120 RKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNAS 179
++ L++ L L P Q++ WFQN+R + K + E L+ L +N R +
Sbjct: 166 KEVLAKHLMLRPRQIEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEENHRLHREVEELR 225
Query: 180 CPNCGGPTAIGEMS 193
G PT + S
Sbjct: 226 AMKVG-PTTVNSAS 238
>UNIPROTKB|Q8UVR3 [details] [associations]
symbol:lmx1b.1 "LIM homeobox transcription factor 1-beta.1"
species:8355 "Xenopus laevis" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0039020 "pronephric nephron tubule development"
evidence=IMP] [GO:0072013 "glomus development" evidence=IEP;IMP]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0072013
GO:GO:0039020 HOVERGEN:HBG052335 KO:K09371 EMBL:AF414086
RefSeq:NP_001083902.1 UniGene:Xl.12464 HSSP:P50480
ProteinModelPortal:Q8UVR3 GeneID:399182 KEGG:xla:399182 CTD:399182
Xenbase:XB-GENE-494754 Uniprot:Q8UVR3
Length = 400
Score = 128 (50.1 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 37/129 (28%), Positives = 60/129 (46%)
Query: 55 ESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRH-TQHQIQEMEAFFKECP 113
+S+ + +EE D K G G D + P + KR T Q + +A F+
Sbjct: 183 DSDSVKSDDEEGD-VKPGKGRVNQGKGSDDGKDPRRPKRPRTILTTQQRRAFKASFEVSS 241
Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYR- 172
P K R+ L+ E GL V+ WFQN+R ++K RH+ Q + +++L + M R
Sbjct: 242 KPCRKVRETLAAETGLSVRVVQVWFQNQRAKIKKLARRHQQQQEQQNSQRLGQEVMSSRM 301
Query: 173 EALSNASCP 181
E + + P
Sbjct: 302 EGMMTSYAP 310
>UNIPROTKB|F6Q274 [details] [associations]
symbol:F6Q274 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104206
OrthoDB:EOG4TTGJP EMBL:CU498958 Ensembl:ENSSSCT00000011554
OMA:CGSEDED Uniprot:F6Q274
Length = 280
Score = 125 (49.1 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 68 STKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL 127
S +E +G + Q Q P K+++ T HQI E+E F + R +++++L
Sbjct: 102 SVLQAAEGRDGMTIFGQRQTPKKRRKSRTFTNHQIYELEKRFLYQKYLSPADRDQIAQQL 161
Query: 128 GLEPLQVKFWFQNKRTQMKTQHE 150
GL QV WFQN+R ++K E
Sbjct: 162 GLTNAQVITWFQNRRAKLKRDLE 184
>UNIPROTKB|F1S4R4 [details] [associations]
symbol:LOC100739572 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007406 "negative
regulation of neuroblast proliferation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:CU462856
Ensembl:ENSSSCT00000011671 Uniprot:F1S4R4
Length = 253
Score = 119 (46.9 bits), Expect = 8.3e-05, Sum P(3) = 8.3e-05
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 87 RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
RP + + T Q+ +E F+ C + ++R EL+R+L L QVK WFQN+RT+ K
Sbjct: 19 RPKRTRT--SFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQK 76
Query: 147 TQHERHENTQLRT 159
++ ++++LR+
Sbjct: 77 K--DQGKDSELRS 87
Score = 43 (20.2 bits), Expect = 8.3e-05, Sum P(3) = 8.3e-05
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 699 PDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
P T G + G A+G L ++ L+ SV ++LS + +L A ++ + A
Sbjct: 172 PGPTGPGGLHAGTPAAGHGLFSLPVPSLLGSV-ASRLSSAPLTMAGSL-AGNLQELSARY 229
Query: 759 SCESA 763
SA
Sbjct: 230 LSSSA 234
Score = 38 (18.4 bits), Expect = 8.3e-05, Sum P(3) = 8.3e-05
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 251 PGIGGGEMYGAADLLRSISAPTEADKP 277
P +G G G+A + + P A P
Sbjct: 135 PALGAGAAAGSAAAASAAAGPAGAASP 161
>UNIPROTKB|F1PUR9 [details] [associations]
symbol:DUXA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 OMA:PGYATKQ
EMBL:AAEX03000701 Ensembl:ENSCAFT00000003829
GeneTree:ENSGT00610000085975 Uniprot:F1PUR9
Length = 163
Score = 114 (45.2 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 31/114 (27%), Positives = 55/114 (48%)
Query: 47 LDMTQNTSESEIA---RLREEEFDSTKSGSENHEGASGDDQ----EQRPNKKKRYHR--H 97
L + N ES I + R K + + S DQ E+ P+++ R R +
Sbjct: 48 LALEVNAEESRIQVWFQNRRARHQCQKKSEPDEDLESSQDQDYPEEEIPSREDRRCRTSY 107
Query: 98 TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
T Q+ + F P+P R++L++E+G+ +V+ WFQN+R++ Q +R
Sbjct: 108 TSSQLHTLIEAFTNNPYPGIDTREQLAKEIGIPESRVQIWFQNRRSRFHVQRKR 161
>UNIPROTKB|E2QW59 [details] [associations]
symbol:RAX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104256 EMBL:AAEX03000108 EMBL:AAEX03000109
Ensembl:ENSCAFT00000000155 Uniprot:E2QW59
Length = 331
Score = 126 (49.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 36/115 (31%), Positives = 65/115 (56%)
Query: 79 ASGD---DQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
A+GD +E++P KK R +R T +Q+ E+E F++ +PD R+EL+ ++ L ++
Sbjct: 120 ATGDAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 179
Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTA 188
V+ + + KR Q + +H + E ++++ RA+ R E SN P C PT+
Sbjct: 180 VQPYLKGKR-QKQVKHRKSE-----PKSQRARAEPHR-EETKSN---PKCRSPTS 224
>UNIPROTKB|G3V2N3 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:Z97200 HGNC:HGNC:9142 ChiTaRS:PRRX1
ProteinModelPortal:G3V2N3 SMR:G3V2N3 Ensembl:ENST00000497230
ArrayExpress:G3V2N3 Bgee:G3V2N3 Uniprot:G3V2N3
Length = 200
Score = 120 (47.3 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 71 SGSENHEGASGD-DQEQRPNKKKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKELSREL 127
SGS+ + + + E++ +K+R +R T Q+Q +E F+ +PD R++L+R +
Sbjct: 72 SGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRV 131
Query: 128 GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
L +V+ WFQN+R + + R+E L +N L
Sbjct: 132 NLTEARVQVWFQNRRAKFR----RNERAMLANKNASL 164
>ZFIN|ZDB-GENE-020905-5 [details] [associations]
symbol:prrx1a "paired related homeobox 1a"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-020905-5 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 HSSP:P06601
HOVERGEN:HBG021349 OrthoDB:EOG4RR6J8 eggNOG:NOG309174 EMBL:BX548024
EMBL:BC053228 IPI:IPI00493267 RefSeq:NP_999899.1 UniGene:Dr.32622
SMR:Q7T373 Ensembl:ENSDART00000041365 GeneID:406431 KEGG:dre:406431
CTD:406431 InParanoid:Q7T373 OMA:CANNTTA NextBio:20818028
Uniprot:Q7T373
Length = 245
Score = 123 (48.4 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 39/132 (29%), Positives = 64/132 (48%)
Query: 45 HPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPN-------KKKRYHRH 97
H LD+ + E A+ E ++ +S E+ SG D Q+ N KKKR R
Sbjct: 40 HLLDL-EEAREMVGAQAEESAGEAGRSMLESPGLTSGSDTTQQENEQLNAEEKKKRKQRR 98
Query: 98 TQ-----HQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERH 152
+ Q+Q +E F+ +PD R++L+R + L +V+ WFQN+R + + R+
Sbjct: 99 NRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR----RN 154
Query: 153 ENTQLRTENEKL 164
E L ++N L
Sbjct: 155 ERAMLASKNASL 166
>UNIPROTKB|G1K361 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AADN02033985
EMBL:AADN02033987 EMBL:AADN02033986 ProteinModelPortal:G1K361
Ensembl:ENSGALT00000033836 Uniprot:G1K361
Length = 214
Score = 121 (47.7 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 29/97 (29%), Positives = 54/97 (55%)
Query: 71 SGSENHEGASGD-DQEQRPNKKKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKELSREL 127
SGS+ + + + E++ +K+R +R T Q+Q +E F+ +PD R++L+R +
Sbjct: 72 SGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRV 131
Query: 128 GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
L +V+ WFQN+R + + R+E L ++N L
Sbjct: 132 NLTEARVQVWFQNRRAKFR----RNERAMLASKNASL 164
>FB|FBgn0015524 [details] [associations]
symbol:otp "orthopedia" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0007417 "central nervous system development"
evidence=NAS] [GO:0007379 "segment specification" evidence=NAS]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0046331 "lateral inhibition"
evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:AE013599
GO:GO:0007275 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0046331 InterPro:IPR003654
PROSITE:PS50803 GeneTree:ENSGT00700000104013 GO:GO:0000976
eggNOG:NOG256838 EMBL:BT023887 EMBL:BT030422 RefSeq:NP_001036563.1
RefSeq:NP_001097388.2 UniGene:Dm.14052 ProteinModelPortal:P56672
SMR:P56672 DIP:DIP-17198N MINT:MINT-743840 STRING:P56672
EnsemblMetazoa:FBtr0290289 GeneID:37364 KEGG:dme:Dmel_CG10036
UCSC:CG10036-RC CTD:23440 FlyBase:FBgn0015524 InParanoid:P56672
OMA:HAGVNSF OrthoDB:EOG4J6Q7G PhylomeDB:P56672 GenomeRNAi:37364
NextBio:803284 Bgee:P56672 GermOnline:CG10036 Uniprot:P56672
Length = 409
Score = 125 (49.1 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 71 SGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLE 130
+G+ N+ + ++ Q+ ++K+ R T Q+ E+E F + +PD R+E++ +GL
Sbjct: 90 NGNNNNGNGNNNNSMQQQDQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLT 149
Query: 131 PLQVKFWFQNKRTQMK 146
+V+ WFQN+R + K
Sbjct: 150 ESRVQVWFQNRRAKWK 165
Score = 47 (21.6 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 167 DNMRYREALSNASCPNCGGPTA 188
D+M Y+ ++ SC G P+A
Sbjct: 266 DSMMYQHSVGGVSCGPSGSPSA 287
Score = 41 (19.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 23/71 (32%), Positives = 32/71 (45%)
Query: 682 GGDPDYVALLP--SGFAIL----PDGTSLH-----GANIGEAASGGSLLTVAFQILVDSV 730
GGD V + P +GF L P +SL+ G N+G A GS L DS+
Sbjct: 209 GGDRWSVGVNPMTAGFGQLNQSSPLSSSLNSGLNSGINMGSALGAGSYQHYGLNALGDSM 268
Query: 731 PTAKLSLGSVA 741
+ S+G V+
Sbjct: 269 -MYQHSVGGVS 278
>RGD|1311471 [details] [associations]
symbol:Prrx2 "paired related homeobox 2" species:10116 "Rattus
norvegicus" [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA;ISO] [GO:0042472 "inner ear morphogenesis"
evidence=IEA;ISO] [GO:0042474 "middle ear morphogenesis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045880 "positive regulation of smoothened
signaling pathway" evidence=IEA;ISO] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IEA;ISO] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISO] [GO:0048844 "artery
morphogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1311471 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0030326
GO:GO:0051216 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0048844 GO:GO:0048701 GeneTree:ENSGT00700000104279
GO:GO:0002053 GO:GO:0045880 GO:GO:0042474 EMBL:CH474001 KO:K09329
OrthoDB:EOG4RR6J8 CTD:51450 IPI:IPI00372003 RefSeq:NP_001099209.1
UniGene:Rn.93004 Ensembl:ENSRNOT00000008270 GeneID:113931
KEGG:rno:113931 UCSC:RGD:1311471 NextBio:618046 Uniprot:D3ZLB3
Length = 248
Score = 123 (48.4 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 35/115 (30%), Positives = 56/115 (48%)
Query: 55 ESEIARLREEEFDSTKSGSENHEG---ASGDDQEQRPNKKKRYHRHT--QHQIQEMEAFF 109
E+ RE S+ S + +G A G + KK+R +R T Q+Q +E F
Sbjct: 59 EAREGAAREPSGGSSGSEAAPQDGECAAPGHGSATKRKKKQRRNRTTFNSSQLQALERVF 118
Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
+ +PD R+EL+R + L +V+ WFQN+R + + R+E L T + L
Sbjct: 119 ERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFR----RNERAMLATRSASL 169
>ZFIN|ZDB-GENE-990415-205 [details] [associations]
symbol:vsx1 "visual system homeobox 1 homolog,
chx10-like" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-205 GO:GO:0007275 GO:GO:0005634 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0050896
Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG237888
HOGENOM:HOG000115909 InterPro:IPR023339 PROSITE:PS51496 CTD:30813
HOVERGEN:HBG036251 KO:K09335 OrthoDB:EOG4907B0 EMBL:AF025348
IPI:IPI00513332 RefSeq:NP_571408.1 UniGene:Dr.558
ProteinModelPortal:O42250 SMR:O42250 STRING:O42250 GeneID:30598
KEGG:dre:30598 InParanoid:O42250 NextBio:20806965
ArrayExpress:O42250 Uniprot:O42250
Length = 344
Score = 126 (49.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 47 LDMTQNTSESEIARLREEEFD-----STKSGSENHEGASGDDQEQRPNKKKRYHR--HTQ 99
+ + Q+ +ES + E++ D SG N SG+ Q+ +KKR HR T
Sbjct: 105 IPLLQSRTESHFMQNLEQQRDVYSDDDCLSGDRNDGKNSGNSQK----RKKRRHRTVFTS 160
Query: 100 HQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
HQ++E+E F E +PD R+ L+ + L +++ WFQN+R + + + +
Sbjct: 161 HQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREK 211
>UNIPROTKB|J9P485 [details] [associations]
symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03015567 EMBL:AAEX03015568
EMBL:AAEX03015569 Ensembl:ENSCAFT00000043720 Uniprot:J9P485
Length = 134
Score = 105 (42.0 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 29/91 (31%), Positives = 45/91 (49%)
Query: 90 KKKRYHR-HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
K KR + Q+ +E F++ + +RK+L+ L L QVK WFQN+RT+ K Q
Sbjct: 35 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQ 94
Query: 149 HERHENTQLRTENEKLRADNMRYREALSNAS 179
E + + + + N R+R A AS
Sbjct: 95 KLEEEGSDSQQKKKGTHHIN-RWRIATKQAS 124
>UNIPROTKB|H0YHX3 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AC004080 HGNC:HGNC:5105 Ensembl:ENST00000511914 Uniprot:H0YHX3
Length = 140
Score = 105 (42.0 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 91 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
K+ +T+ Q+ E+E F + ++R E++ L L QVK WFQN+R + K H+
Sbjct: 36 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 95
Query: 151 RHENTQLRTEN 161
NT++R+ N
Sbjct: 96 L-PNTKMRSSN 105
>UNIPROTKB|P97273 [details] [associations]
symbol:TITF1 "Thyroid transcription factor 1" species:10141
"Cavia porcellus" [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007411 GO:GO:0021766 GO:GO:0001764
GO:GO:0045893 GO:GO:0005654 GO:GO:0033327 GO:GO:0043565
GO:GO:0006644 GO:GO:0045944 GO:GO:0007626 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0003705 GO:GO:0000122 GO:GO:0030336 GO:GO:0044212
GO:GO:0009725 GO:GO:0060510 GO:GO:0021983 GO:GO:0007492
GO:GO:0021877 GO:GO:0048709 GO:GO:0021759 GO:GO:0021892
GO:GO:0030512 GO:GO:0060441 GO:GO:0010719 GO:GO:0021795
GO:GO:0030878 GO:GO:0060430 GO:GO:0021798 GO:GO:0060486
eggNOG:NOG328614 HOGENOM:HOG000231923 HOVERGEN:HBG006689
GO:GO:0031128 GO:GO:0042696 EMBL:U82718 ProteinModelPortal:P97273
SMR:P97273 STRING:P97273 InParanoid:P97273 Uniprot:P97273
Length = 112
Score = 105 (42.0 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 90 KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ- 148
++ R +Q Q+ E+E FK+ + +R+ L+ + L P QVK WFQN R +MK Q
Sbjct: 1 RRNRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQA 60
Query: 149 HERHENTQLRTEN 161
++ QL+ ++
Sbjct: 61 KDKAAQQQLQQDS 73
>UNIPROTKB|F1NXN6 [details] [associations]
symbol:ZFHX3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=IEA] [GO:0045663 "positive regulation of
myoblast differentiation" evidence=IEA] InterPro:IPR001356
InterPro:IPR007087 InterPro:IPR009057 InterPro:IPR015880
Pfam:PF00046 PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355
SMART:SM00389 GO:GO:0005739 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0044212 GO:GO:0045662 GO:GO:0045663
GeneTree:ENSGT00530000063717 EMBL:AADN02054193 EMBL:AADN02054194
IPI:IPI00821915 Ensembl:ENSGALT00000038734 Uniprot:F1NXN6
Length = 185
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 37/133 (27%), Positives = 58/133 (43%)
Query: 52 NTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKE 111
N S I L E + DS E + QE +K+ R T +Q++ ++ FF
Sbjct: 1 NFSNPPITSLEELKIDSRPPSPEPQK------QEYWGSKRSSRTRFTDYQLRVLQDFFDA 54
Query: 112 CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRY 171
+P D + ++LS L L + WFQN R + + + +EN + E+ N RY
Sbjct: 55 NAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKAR---KNYENQGEGKDGERRELTNDRY 111
Query: 172 -REALSNASCPNC 183
R + N C C
Sbjct: 112 IRTSNLNYQCKKC 124
>TAIR|locus:2040520 [details] [associations]
symbol:HB22 "homeobox protein 22" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006919 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
EMBL:AC006282 EMBL:DQ056569 IPI:IPI00527137 PIR:E84782
RefSeq:NP_850266.1 UniGene:At.53052 ProteinModelPortal:Q4PSR7
SMR:Q4PSR7 EnsemblPlants:AT2G36610.1 GeneID:818233
KEGG:ath:AT2G36610 GeneFarm:3964 TAIR:At2g36610 eggNOG:NOG297545
InParanoid:Q4PSR7 OMA:MEYWSSS PhylomeDB:Q4PSR7
ProtClustDB:CLSN2918190 Genevestigator:Q4PSR7 GermOnline:AT2G36610
Uniprot:Q4PSR7
Length = 185
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 32/107 (29%), Positives = 55/107 (51%)
Query: 77 EGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKE--CPHPDDKQ-----RK-ELSRELG 128
E G++ ++K+ + T Q++ +E F+E +PD K RK +LS+ELG
Sbjct: 55 ESGYGEESNSFNGQEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELG 114
Query: 129 LEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREAL 175
L+P Q+ WFQN++ + K + H LR E + + + +E L
Sbjct: 115 LQPRQIAVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKELLQEEL 161
>MGI|MGI:96785 [details] [associations]
symbol:Lhx2 "LIM homeobox protein 2" species:10090 "Mus
musculus" [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IPI] [GO:0001843
"neural tube closure" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
[GO:0007498 "mesoderm development" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IMP] [GO:0021537 "telencephalon development"
evidence=IMP] [GO:0021978 "telencephalon regionalization"
evidence=IGI;IMP] [GO:0022008 "neurogenesis" evidence=IDA]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048646 "anatomical structure formation
involved in morphogenesis" evidence=IMP] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IGI] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:96785 GO:GO:0005634 GO:GO:0007411
GO:GO:0007498 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
eggNOG:NOG240987 GeneTree:ENSGT00680000099670 KO:K09373
GO:GO:0021978 GO:GO:0000988 GO:GO:2000678 CTD:9355
HOGENOM:HOG000034022 HOVERGEN:HBG006262 OrthoDB:EOG4G4GQK
EMBL:AF124734 EMBL:BC055741 IPI:IPI00129385 RefSeq:NP_034840.1
UniGene:Mm.142856 ProteinModelPortal:Q9Z0S2 SMR:Q9Z0S2
STRING:Q9Z0S2 PhosphoSite:Q9Z0S2 PRIDE:Q9Z0S2
Ensembl:ENSMUST00000000253 GeneID:16870 KEGG:mmu:16870
InParanoid:Q9Z0S2 OMA:CNENDAE NextBio:290834 Bgee:Q9Z0S2
CleanEx:MM_LHX2 Genevestigator:Q9Z0S2 GermOnline:ENSMUSG00000000247
Uniprot:Q9Z0S2
Length = 406
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 36/125 (28%), Positives = 63/125 (50%)
Query: 75 NHEGASGDDQEQR-PNKKKRYHRHTQ---HQIQEMEAFFKECPHPDDKQRKELSRELGLE 130
N A D++Q P+ +K T HQ++ M+++F +PD K K+L+++ GL
Sbjct: 247 NENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLT 306
Query: 131 PLQVKFWFQNKRTQMKTQHERHENTQL-RTENEKLRADNMRYREA-LSNASCPNCGGPTA 188
++ WFQN R + + R ENT + +T + L+ + LSNAS PT
Sbjct: 307 KRVLQVWFQNARAKFRRNLLRQENTGVDKTSDATLQTGTPSGPASELSNASLSPSSTPTT 366
Query: 189 IGEMS 193
+ +++
Sbjct: 367 LTDLT 371
>UNIPROTKB|D4A380 [details] [associations]
symbol:Lhx2 "LIM/homeobox protein Lhx2" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71076 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670 KO:K09373 CTD:9355
OrthoDB:EOG4G4GQK UniGene:Rn.81063 EMBL:CH473983 IPI:IPI00950401
RefSeq:NP_001100041.1 SMR:D4A380 Ensembl:ENSRNOT00000064507
GeneID:296706 KEGG:rno:296706 NextBio:641689 Uniprot:D4A380
Length = 406
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 36/125 (28%), Positives = 63/125 (50%)
Query: 75 NHEGASGDDQEQR-PNKKKRYHRHTQ---HQIQEMEAFFKECPHPDDKQRKELSRELGLE 130
N A D++Q P+ +K T HQ++ M+++F +PD K K+L+++ GL
Sbjct: 247 NENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLT 306
Query: 131 PLQVKFWFQNKRTQMKTQHERHENTQL-RTENEKLRADNMRYREA-LSNASCPNCGGPTA 188
++ WFQN R + + R ENT + +T + L+ + LSNAS PT
Sbjct: 307 KRVLQVWFQNARAKFRRNLLRQENTGVDKTSDATLQTGTPSGPASELSNASLSPSSTPTT 366
Query: 189 IGEMS 193
+ +++
Sbjct: 367 LTDLT 371
>ZFIN|ZDB-GENE-990708-7 [details] [associations]
symbol:otpb "orthopedia homolog b" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0021884 "forebrain
neuron development" evidence=IGI] [GO:0021854 "hypothalamus
development" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990708-7 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0000976 HSSP:P06601
EMBL:AF071496 EMBL:BC076366 IPI:IPI00512446 IPI:IPI00817208
RefSeq:NP_571175.1 UniGene:Dr.81295 ProteinModelPortal:Q6DGH9
SMR:Q6DGH9 STRING:Q6DGH9 Ensembl:ENSDART00000081249
Ensembl:ENSDART00000134606 GeneID:30316 KEGG:dre:30316 CTD:30316
eggNOG:NOG256838 HOVERGEN:HBG001617 InParanoid:Q6DGH9
OrthoDB:EOG4FXR8D NextBio:20806755 ArrayExpress:Q6DGH9 Bgee:Q6DGH9
Uniprot:Q6DGH9
Length = 315
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 34/112 (30%), Positives = 53/112 (47%)
Query: 37 TNMMEGQ-LHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYH 95
T +EG L P + N + + D K +N G +Q K+KR+
Sbjct: 47 TETVEGTTLLPGEEISNGGSNPNGMQQVNAKDQEKQQQQNSNQTGGQQNQQ---KQKRHR 103
Query: 96 -RHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
R T Q+ E+E F + +PD R+EL+ +GL +V+ WFQN+R + K
Sbjct: 104 TRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWK 155
>FB|FBgn0004607 [details] [associations]
symbol:zfh2 "Zn finger homeodomain 2" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS;NAS;IDA] [GO:0003677 "DNA binding" evidence=NAS;TAS]
[GO:0007399 "nervous system development" evidence=IEP] [GO:0000977
"RNA polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007417 "central nervous system
development" evidence=NAS] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR013087 InterPro:IPR015880 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028 PROSITE:PS50071
PROSITE:PS50157 SMART:SM00355 SMART:SM00389 GO:GO:0005634
GO:GO:0007399 GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60 GO:GO:0007476
EMBL:AE014135 GO:GO:0000977 EMBL:M63450 EMBL:AY312816 EMBL:AY312817
EMBL:AY312818 EMBL:AY312819 EMBL:AY312820 EMBL:AY312821
EMBL:AY312822 EMBL:AY312823 EMBL:AY312824 EMBL:AY312825
EMBL:AY312826 EMBL:AY312827 EMBL:AY312828 EMBL:AY312829
EMBL:AY312830 EMBL:AY312831 EMBL:AY312832 EMBL:AY312833
EMBL:AY312834 EMBL:AY312835 EMBL:AY312836 EMBL:AY312837
EMBL:AY312838 EMBL:AY312839 EMBL:AY060681 PIR:S33642
RefSeq:NP_524623.2 ProteinModelPortal:P28167 SMR:P28167
IntAct:P28167 MINT:MINT-904703 STRING:P28167 PaxDb:P28167
EnsemblMetazoa:FBtr0089070 GeneID:43795 KEGG:dme:Dmel_CG1449
CTD:43795 FlyBase:FBgn0004607 eggNOG:NOG301069
GeneTree:ENSGT00530000063717 InParanoid:P28167 KO:K09380
OrthoDB:EOG447D82 PhylomeDB:P28167 GenomeRNAi:43795 NextBio:835886
Bgee:P28167 GermOnline:CG1449 Uniprot:P28167
Length = 3005
Score = 137 (53.3 bits), Expect = 0.00010, P = 0.00010
Identities = 40/155 (25%), Positives = 63/155 (40%)
Query: 17 GRNGNVXXXXXXXXXXXXQPTNMMEGQLHPLDMTQNTSESEIARLREEEFDSTKSGSENH 76
G GNV + G + + T E +A + ST+ S N
Sbjct: 2082 GAAGNVYGSMNDLLNQQLENMGSNMGPPKKMQIVGKTFEKNVAPMVTSGSVSTQFES-NS 2140
Query: 77 EGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKF 136
+S K+ R T +QI+ ++ FF+ +P D + LS+ L L P +
Sbjct: 2141 SNSSSSSSSTSGGKRANRTRFTDYQIKVLQEFFENNSYPKDSDLEYLSKLLLLSPRVIVV 2200
Query: 137 WFQNKRTQMKTQHERHENTQLRTENEKLRADNMRY 171
WFQN R + + +E N L ENE+ + N+ Y
Sbjct: 2201 WFQNARQKQRKIYENQPNNTL-FENEETKKQNINY 2234
>UNIPROTKB|E1C143 [details] [associations]
symbol:PITX3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0002089 "lens morphogenesis in camera-type eye" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0048666 "neuron development" evidence=IEA] [GO:0070306 "lens
fiber cell differentiation" evidence=IEA] [GO:0071542 "dopaminergic
neuron differentiation" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0045893
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104438 CTD:5309 KO:K09357 OMA:ASPYMYR
EMBL:AADN02027826 EMBL:AADN02027827 IPI:IPI00591458
RefSeq:XP_421631.2 Ensembl:ENSGALT00000009008 GeneID:423756
KEGG:gga:423756 NextBio:20826179 Uniprot:E1C143
Length = 292
Score = 125 (49.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 26/95 (27%), Positives = 50/95 (52%)
Query: 64 EEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRH-TQHQIQEMEAFFKECPHPDDKQRKE 122
++ T+ +N S + K++R H T Q+QE+EA F+ +PD R+E
Sbjct: 33 QDHSDTEKSQQNQTDDSNPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREE 92
Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
++ L +V+ WF+N+R + + + ER++ +L
Sbjct: 93 IAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 126
Score = 41 (19.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 415 KQHGEGTWAVVDVSLDNLRP 434
KQH T+ V + NL P
Sbjct: 264 KQHANFTYPAVQTAASNLSP 283
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 727 VDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
V VP + SL ++ +NNL + ++ +S +C A
Sbjct: 206 VTGVPAS--SLNNLGNINNLNSPSLNSAVSSSACPYA 240
>FB|FBgn0010323 [details] [associations]
symbol:Gsc "Goosecoid" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IC;ISS;NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 EMBL:AE014134
GO:GO:0001078 GO:GO:0043565 Gene3D:1.10.10.60 SUPFAM:SSF46689
CTD:145258 eggNOG:NOG247162 KO:K09324 EMBL:X95420 EMBL:U52968
PIR:S70617 RefSeq:NP_476949.1 UniGene:Dm.4841
ProteinModelPortal:P54366 SMR:P54366 IntAct:P54366 MINT:MINT-314608
STRING:P54366 PRIDE:P54366 GeneID:33240 KEGG:dme:Dmel_CG2851
FlyBase:FBgn0010323 HOGENOM:HOG000276707 InParanoid:P54366
OrthoDB:EOG4RV17N GenomeRNAi:33240 NextBio:782613 Bgee:P54366
GermOnline:CG2851 Uniprot:P54366
Length = 419
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 27/78 (34%), Positives = 50/78 (64%)
Query: 88 PNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
P K+KR HR T+ Q++++EA F + +PD R++L+ ++ L+ +V+ WF+N+R +
Sbjct: 282 PPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKW 341
Query: 146 KTQHERHENTQLRTENEK 163
+ Q +R E +LR E+
Sbjct: 342 RKQ-KREEQERLRKLQEE 358
>RGD|71076 [details] [associations]
symbol:Lhx2 "LIM homeobox 2" species:10116 "Rattus norvegicus"
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=ISO] [GO:0001843
"neural tube closure" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0007411 "axon guidance"
evidence=IEA;ISO] [GO:0007420 "brain development" evidence=ISO]
[GO:0007498 "mesoderm development" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA;ISO] [GO:0021537 "telencephalon development"
evidence=ISO] [GO:0021978 "telencephalon regionalization"
evidence=IEA;ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030182 "neuron differentiation" evidence=IEP;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048646
"anatomical structure formation involved in morphogenesis"
evidence=ISO] [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=IEA;ISO] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:71076 GO:GO:0005634 GO:GO:0007411 GO:GO:0045893 GO:GO:0030182
GO:GO:0007498 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
eggNOG:NOG240987 GO:GO:0021978 GO:GO:0000988 GO:GO:2000678
HOGENOM:HOG000034022 HOVERGEN:HBG006262 EMBL:L06804 IPI:IPI00199572
PIR:A47179 UniGene:Rn.81063 ProteinModelPortal:P36198 SMR:P36198
STRING:P36198 UCSC:RGD:71076 InParanoid:P36198 ArrayExpress:P36198
Genevestigator:P36198 GermOnline:ENSRNOG00000010551 Uniprot:P36198
Length = 426
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 36/125 (28%), Positives = 63/125 (50%)
Query: 75 NHEGASGDDQEQR-PNKKKRYHRHTQ---HQIQEMEAFFKECPHPDDKQRKELSRELGLE 130
N A D++Q P+ +K T HQ++ M+++F +PD K K+L+++ GL
Sbjct: 245 NENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLT 304
Query: 131 PLQVKFWFQNKRTQMKTQHERHENTQL-RTENEKLRADNMRYREA-LSNASCPNCGGPTA 188
++ WFQN R + + R ENT + +T + L+ + LSNAS PT
Sbjct: 305 KRVLQVWFQNARAKFRRNLLRQENTGVDKTSDATLQTGTPSGPASELSNASLSPSSTPTT 364
Query: 189 IGEMS 193
+ +++
Sbjct: 365 LTDLT 369
>UNIPROTKB|P36198 [details] [associations]
symbol:Lhx2 "LIM/homeobox protein Lhx2" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71076 GO:GO:0005634 GO:GO:0007411 GO:GO:0045893
GO:GO:0030182 GO:GO:0007498 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843
GO:GO:0009953 eggNOG:NOG240987 GO:GO:0021978 GO:GO:0000988
GO:GO:2000678 HOGENOM:HOG000034022 HOVERGEN:HBG006262 EMBL:L06804
IPI:IPI00199572 PIR:A47179 UniGene:Rn.81063
ProteinModelPortal:P36198 SMR:P36198 STRING:P36198 UCSC:RGD:71076
InParanoid:P36198 ArrayExpress:P36198 Genevestigator:P36198
GermOnline:ENSRNOG00000010551 Uniprot:P36198
Length = 426
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 36/125 (28%), Positives = 63/125 (50%)
Query: 75 NHEGASGDDQEQR-PNKKKRYHRHTQ---HQIQEMEAFFKECPHPDDKQRKELSRELGLE 130
N A D++Q P+ +K T HQ++ M+++F +PD K K+L+++ GL
Sbjct: 245 NENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLT 304
Query: 131 PLQVKFWFQNKRTQMKTQHERHENTQL-RTENEKLRADNMRYREA-LSNASCPNCGGPTA 188
++ WFQN R + + R ENT + +T + L+ + LSNAS PT
Sbjct: 305 KRVLQVWFQNARAKFRRNLLRQENTGVDKTSDATLQTGTPSGPASELSNASLSPSSTPTT 364
Query: 189 IGEMS 193
+ +++
Sbjct: 365 LTDLT 369
>ZFIN|ZDB-GENE-050114-2 [details] [associations]
symbol:lmx1bb "LIM homeobox transcription factor 1,
beta b" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IGI] [GO:0042472
"inner ear morphogenesis" evidence=IMP] [GO:0021592 "fourth
ventricle development" evidence=IGI] [GO:0060117 "auditory receptor
cell development" evidence=IMP] [GO:0032474 "otolith morphogenesis"
evidence=IMP] [GO:0048752 "semicircular canal morphogenesis"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0002072 "optic cup morphogenesis involved in camera-type eye
development" evidence=IGI] [GO:0061386 "closure of optic fissure"
evidence=IGI] [GO:0060041 "retina development in camera-type eye"
evidence=IGI] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-050114-2 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0060041 GO:GO:0032474
GO:GO:0048752 GO:GO:0030917 GO:GO:0060117 GO:GO:0061386
GO:GO:0021592 HOVERGEN:HBG052335 KO:K09371 EMBL:AY894989
IPI:IPI00631669 RefSeq:NP_001020338.2 UniGene:Dr.108678
ProteinModelPortal:Q4VJ29 STRING:Q4VJ29 GeneID:554360
KEGG:dre:554360 CTD:554360 InParanoid:Q4VJ29 NextBio:20880753
Uniprot:Q4VJ29
Length = 375
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 55 ESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPH 114
+S+ + +EE D G D ++ R K+ R TQ Q + +A F+
Sbjct: 160 DSDSEKSEDEELDIKPEKGSGGTGKGDDGKDPRRPKRPRTILTTQ-QRRAFKASFEVSSK 218
Query: 115 PDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYR-E 173
P K R+ L+ E GL V+ WFQN+R +MK R + Q + +++L + M R E
Sbjct: 219 PCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQQEQQNSQRLGQEVMSNRME 278
Query: 174 ALSNA 178
+ N+
Sbjct: 279 GMMNS 283
>ZFIN|ZDB-GENE-050114-3 [details] [associations]
symbol:lmx1ba "LIM homeobox transcription factor 1,
beta a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IGI] [GO:0030902
"hindbrain development" evidence=IMP] [GO:0021592 "fourth ventricle
development" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0061386 "closure of optic fissure" evidence=IGI]
[GO:0060041 "retina development in camera-type eye" evidence=IGI]
[GO:0002072 "optic cup morphogenesis involved in camera-type eye
development" evidence=IGI] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 ZFIN:ZDB-GENE-050114-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0060041 GeneTree:ENSGT00700000104050 GO:GO:0030917
GO:GO:0061386 HOGENOM:HOG000231629 GO:GO:0021592 HOVERGEN:HBG052335
EMBL:BX511196 EMBL:CABZ01060115 EMBL:CABZ01060116 EMBL:CABZ01060117
EMBL:CABZ01060118 EMBL:CABZ01060119 EMBL:CABZ01084097
EMBL:CABZ01084098 EMBL:CABZ01084099 EMBL:CABZ01084100 EMBL:AY551078
IPI:IPI00616332 UniGene:Dr.94065 Ensembl:ENSDART00000126544
Uniprot:Q4L1M5
Length = 375
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 48/154 (31%), Positives = 71/154 (46%)
Query: 39 MMEGQLHPLDMTQNTSESEIARLREEEFDSTKSGSEN-----HEGASGD----DQEQRPN 89
+ EGQL L T E ++A + DS KS E+ +GA G D + P
Sbjct: 135 LKEGQL--LCKTDYEREKDLAS--PDLSDSDKSEDEDLDVKPEKGAGGQGKGSDDSKDPR 190
Query: 90 KKKRYHRH-TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
+ KR T Q + +A F+ P K R+ L+ E GL V+ WFQN+R +MK
Sbjct: 191 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKL 250
Query: 149 HERHENTQLRTENEKLRADNMRYR-EALSNASCP 181
R + Q + +++L D M R E L ++ P
Sbjct: 251 ARRQQQQQEQQNSQRLGQDVMSSRMENLMSSYTP 284
>UNIPROTKB|F1P4U9 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 IPI:IPI00576774 EMBL:AADN02020025
EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
EMBL:AADN02020029 EMBL:AADN02020030 Ensembl:ENSGALT00000015083
ArrayExpress:F1P4U9 Uniprot:F1P4U9
Length = 148
Score = 107 (42.7 bits), Expect = 0.00012, P = 0.00012
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 88 PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
P +++ +++ Q E+E F P+ K+R E+S LGL QVK WFQN+R + K
Sbjct: 53 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 112
Query: 148 QHERHENTQLRTENEK 163
++ + + + E ++
Sbjct: 113 ENNKDKFPASKQEGKE 128
>UNIPROTKB|Q9PU20 [details] [associations]
symbol:vax2-a "Ventral anterior homeobox 2a" species:8355
"Xenopus laevis" [GO:0030900 "forebrain development" evidence=ISS]
[GO:0060322 "head development" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0016055 GO:GO:0030900
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060322
HOVERGEN:HBG007558 KO:K09318 EMBL:AJ238649 RefSeq:NP_001081712.1
UniGene:Xl.224 ProteinModelPortal:Q9PU20 GeneID:398011
KEGG:xla:398011 CTD:398011 Xenbase:XB-GENE-492927 Uniprot:Q9PU20
Length = 302
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 87 RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
RP + + T Q+ +E F+ C + ++R EL+R+L L QVK WFQN+RT+ K
Sbjct: 104 RPKRTRT--SFTAEQLYRLELEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQK 161
Query: 147 TQHERHENTQLRTENEKLRADNM 169
R + + +E N+
Sbjct: 162 KDQSRDSEKRSSSTSESFATCNI 184
>UNIPROTKB|F1NYF2 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454
EMBL:AADN02047157 EMBL:AADN02047158 IPI:IPI00600245
Ensembl:ENSGALT00000018301 Uniprot:F1NYF2
Length = 133
Score = 104 (41.7 bits), Expect = 0.00013, P = 0.00013
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 91 KKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
KK++ R T QI +E F++ + +R L+ LG+ QVK WFQN+RT+ + +
Sbjct: 22 KKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKR 81
Query: 149 HERHENTQLR---TENEKLR--ADN 168
H + + +E EKL+ +DN
Sbjct: 82 HAAEMASAKKKHDSETEKLKESSDN 106
>UNIPROTKB|A8MWF9 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001757 EMBL:AC068675 EMBL:AC004149
RefSeq:NP_001035091.1 UniGene:Hs.438 DNASU:4222 GeneID:4222
KEGG:hsa:4222 CTD:4222 HGNC:HGNC:7013 PharmGKB:PA30747
HOGENOM:HOG000230987 KO:K09322 GenomeRNAi:4222 NextBio:16659
IPI:IPI00744956 ProteinModelPortal:A8MWF9 SMR:A8MWF9 STRING:A8MWF9
Ensembl:ENST00000393661 HOVERGEN:HBG100054 ArrayExpress:A8MWF9
Bgee:A8MWF9 Uniprot:A8MWF9
Length = 139
Score = 104 (41.7 bits), Expect = 0.00013, P = 0.00013
Identities = 30/86 (34%), Positives = 44/86 (51%)
Query: 67 DSTKSGSENHEGASGDDQEQR--P--NKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQR 120
+ T+ S S D+QE R P + K R R T+ Q++E+EA F + +R
Sbjct: 27 NETEKKSSRRRKESSDNQENRGKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRR 86
Query: 121 KELSRELGLEPLQVKFWFQNKRTQMK 146
E++ L L QVK WFQN+R + K
Sbjct: 87 YEIAVNLDLSERQVKVWFQNRRMKWK 112
>UNIPROTKB|F6VMK5 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
binding transcription factor activity" evidence=ISS] [GO:0001047
"core promoter binding" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GeneTree:ENSGT00700000104206 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 GO:GO:0071899 GO:GO:0035907
GO:GO:2000836 OMA:YCLGGWN Ensembl:ENSECAT00000001320 Uniprot:F6VMK5
Length = 142
Score = 104 (41.7 bits), Expect = 0.00013, P = 0.00013
Identities = 30/87 (34%), Positives = 44/87 (50%)
Query: 63 EEEFDSTKSGSENHEGAS-GDDQ-EQRPNKKKRY-HRHTQHQIQEMEAFFKECPHPDDKQ 119
+ ++ S EN GAS G Q ++P K+ R HTQ + E+E F + +
Sbjct: 4 DRHLETYPSDCENTSGASRGLPQPSKQPQKRSRAAFSHTQ--VIELERKFSRQKYLSAPE 61
Query: 120 RKELSRELGLEPLQVKFWFQNKRTQMK 146
R L++ L L QVK WFQN+R + K
Sbjct: 62 RAHLAKNLKLTETQVKIWFQNRRYKTK 88
>ZFIN|ZDB-GENE-980526-216 [details] [associations]
symbol:eng1a "engrailed 1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-216 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 PROSITE:PS00033
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 EMBL:CABZ01070420 EMBL:BC080209 IPI:IPI00500053
UniGene:Dr.75072 SMR:Q68EL7 STRING:Q68EL7
Ensembl:ENSDART00000012506 InParanoid:Q68EL7 Uniprot:Q68EL7
Length = 231
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 67 DSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE 126
D SG + ++ + +K+ R T Q+Q ++A F+ + +++R+ L+RE
Sbjct: 121 DRPSSGPRTRKLKKKNNNTESDDKRPRT-AFTAEQLQRLKAEFQTSRYITEQRRQALARE 179
Query: 127 LGLEPLQVKFWFQNKRTQMK 146
LGL Q+K WFQNKR ++K
Sbjct: 180 LGLNESQIKIWFQNKRAKIK 199
>UNIPROTKB|F1RKD0 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879
GO:GO:0021527 GO:GO:0021702 GeneTree:ENSGT00700000104177
GO:GO:0021937 OMA:SHQGQEM EMBL:CU468670 Ensembl:ENSSSCT00000010817
Uniprot:F1RKD0
Length = 401
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 31/112 (27%), Positives = 62/112 (55%)
Query: 37 TNMMEGQLHPLDMTQNTSESEIAR--LREEEFDSTKSGSENHEGASGDDQEQRPNKKKRY 94
+++ EG L+ + + S S + L+++ ++ S S + E A+ +++EQ K+R
Sbjct: 122 SSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKRRG 181
Query: 95 HRHT--QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
R T Q++ ++A F P P R++L++E GL ++ WFQN+R++
Sbjct: 182 PRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 233
>UNIPROTKB|A6QQY6 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879
GO:GO:0021527 GO:GO:0021702 GeneTree:ENSGT00700000104177
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372
OrthoDB:EOG405S1F GO:GO:0021937 CTD:64211 OMA:SHQGQEM
EMBL:DAAA02045421 EMBL:BC150043 IPI:IPI00867450
RefSeq:NP_001095531.1 UniGene:Bt.88188 Ensembl:ENSBTAT00000004042
GeneID:520759 KEGG:bta:520759 InParanoid:A6QQY6 NextBio:20873176
Uniprot:A6QQY6
Length = 402
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 31/112 (27%), Positives = 62/112 (55%)
Query: 37 TNMMEGQLHPLDMTQNTSESEIAR--LREEEFDSTKSGSENHEGASGDDQEQRPNKKKRY 94
+++ EG L+ + + S S + L+++ ++ S S + E A+ +++EQ K+R
Sbjct: 123 SSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKRRG 182
Query: 95 HRHT--QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
R T Q++ ++A F P P R++L++E GL ++ WFQN+R++
Sbjct: 183 PRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 234
>UNIPROTKB|E2RRP3 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879
GO:GO:0021527 GO:GO:0021702 GeneTree:ENSGT00700000104177 KO:K09372
GO:GO:0021937 CTD:64211 OMA:SHQGQEM EMBL:AAEX03014690
RefSeq:XP_543409.3 ProteinModelPortal:E2RRP3
Ensembl:ENSCAFT00000014514 GeneID:486283 KEGG:cfa:486283
NextBio:20860085 Uniprot:E2RRP3
Length = 402
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 31/112 (27%), Positives = 62/112 (55%)
Query: 37 TNMMEGQLHPLDMTQNTSESEIAR--LREEEFDSTKSGSENHEGASGDDQEQRPNKKKRY 94
+++ EG L+ + + S S + L+++ ++ S S + E A+ +++EQ K+R
Sbjct: 123 SSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKRRG 182
Query: 95 HRHT--QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
R T Q++ ++A F P P R++L++E GL ++ WFQN+R++
Sbjct: 183 PRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 234
>UNIPROTKB|Q9H2C1 [details] [associations]
symbol:LHX5 "LIM/homeobox protein Lhx5" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0021702 "cerebellar Purkinje
cell differentiation" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846
GO:GO:0021879 GO:GO:0021527 GO:GO:0021702 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 CTD:64211 OMA:SHQGQEM EMBL:AF291181 EMBL:BC109230
IPI:IPI00022760 RefSeq:NP_071758.1 UniGene:Hs.302029
ProteinModelPortal:Q9H2C1 SMR:Q9H2C1 STRING:Q9H2C1
PhosphoSite:Q9H2C1 DMDM:18202938 PRIDE:Q9H2C1
Ensembl:ENST00000261731 GeneID:64211 KEGG:hsa:64211 UCSC:uc001tvj.1
GeneCards:GC12M113900 HGNC:HGNC:14216 MIM:605992 neXtProt:NX_Q9H2C1
PharmGKB:PA30367 InParanoid:Q9H2C1 PhylomeDB:Q9H2C1
GenomeRNAi:64211 NextBio:66119 Bgee:Q9H2C1 CleanEx:HS_LHX5
Genevestigator:Q9H2C1 GermOnline:ENSG00000089116 Uniprot:Q9H2C1
Length = 402
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 31/112 (27%), Positives = 62/112 (55%)
Query: 37 TNMMEGQLHPLDMTQNTSESEIAR--LREEEFDSTKSGSENHEGASGDDQEQRPNKKKRY 94
+++ EG L+ + + S S + L+++ ++ S S + E A+ +++EQ K+R
Sbjct: 123 SSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKRRG 182
Query: 95 HRHT--QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
R T Q++ ++A F P P R++L++E GL ++ WFQN+R++
Sbjct: 183 PRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 234
>MGI|MGI:107792 [details] [associations]
symbol:Lhx5 "LIM homeobox protein 5" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007267 "cell-cell signaling" evidence=IGI] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IGI] [GO:0021549 "cerebellum
development" evidence=IGI] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IGI] [GO:0021766 "hippocampus
development" evidence=IMP] [GO:0021846 "cell proliferation in
forebrain" evidence=IMP] [GO:0021879 "forebrain neuron
differentiation" evidence=IMP] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IGI]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:107792 GO:GO:0005634 GO:GO:0021766
GO:GO:0045893 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879 GO:GO:0021527
GO:GO:0021702 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F GO:GO:0021937
CTD:64211 OMA:SHQGQEM EMBL:U61155 EMBL:BC057585 IPI:IPI00118119
RefSeq:NP_032525.1 UniGene:Mm.5151 ProteinModelPortal:P61375
SMR:P61375 STRING:P61375 PhosphoSite:P61375 PRIDE:P61375
Ensembl:ENSMUST00000031591 GeneID:16873 KEGG:mmu:16873
InParanoid:P61375 NextBio:290846 Bgee:P61375 CleanEx:MM_LHX5
Genevestigator:P61375 GermOnline:ENSMUSG00000029595 Uniprot:P61375
Length = 402
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 31/112 (27%), Positives = 62/112 (55%)
Query: 37 TNMMEGQLHPLDMTQNTSESEIAR--LREEEFDSTKSGSENHEGASGDDQEQRPNKKKRY 94
+++ EG L+ + + S S + L+++ ++ S S + E A+ +++EQ K+R
Sbjct: 123 SSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKRRG 182
Query: 95 HRHT--QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
R T Q++ ++A F P P R++L++E GL ++ WFQN+R++
Sbjct: 183 PRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 234
>RGD|71079 [details] [associations]
symbol:Lhx5 "LIM homeobox 5" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0007267
"cell-cell signaling" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA;ISO] [GO:0021549 "cerebellum
development" evidence=ISO] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA;ISO] [GO:0021766 "hippocampus
development" evidence=IEA;ISO] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA;ISO] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA;ISO] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation of
granule cell precursor cell proliferation" evidence=IEA;ISO]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71079 GO:GO:0005634 GO:GO:0021766 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0021846 GO:GO:0021879 GO:GO:0021527 GO:GO:0021702
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F GO:GO:0021937
CTD:64211 OMA:SHQGQEM EMBL:L35572 IPI:IPI00198471 PIR:I61573
RefSeq:NP_620605.1 UniGene:Rn.54653 ProteinModelPortal:P61376
SMR:P61376 STRING:P61376 Ensembl:ENSRNOT00000001883 GeneID:124451
KEGG:rno:124451 UCSC:RGD:71079 InParanoid:P61376 NextBio:620463
Genevestigator:P61376 GermOnline:ENSRNOG00000001392 Uniprot:P61376
Length = 402
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 31/112 (27%), Positives = 62/112 (55%)
Query: 37 TNMMEGQLHPLDMTQNTSESEIAR--LREEEFDSTKSGSENHEGASGDDQEQRPNKKKRY 94
+++ EG L+ + + S S + L+++ ++ S S + E A+ +++EQ K+R
Sbjct: 123 SSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKRRG 182
Query: 95 HRHT--QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
R T Q++ ++A F P P R++L++E GL ++ WFQN+R++
Sbjct: 183 PRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 234
>UNIPROTKB|J9P9S0 [details] [associations]
symbol:PRRX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104279
CTD:5396 KO:K09329 EMBL:AAEX03005214 EMBL:AAEX03005215
GeneID:609105 KEGG:cfa:609105 RefSeq:XP_862211.1
ProteinModelPortal:J9P9S0 Ensembl:ENSCAFT00000049641 Uniprot:J9P9S0
Length = 217
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 71 SGSENHEGASGD-DQEQRPNKKKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKELSREL 127
SGS+ + + + E++ +K+R +R T Q+Q +E F+ +PD R++L+R +
Sbjct: 72 SGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRV 131
Query: 128 GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
L +V+ WFQN+R + + R+E L +N L
Sbjct: 132 NLTEARVQVWFQNRRAKFR----RNERAMLANKNASL 164
>UNIPROTKB|Q643W9 [details] [associations]
symbol:Prrx1 "Paired mesoderm homeobox protein 1"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:628884 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
EMBL:CH473958 HOVERGEN:HBG021349 UniGene:Rn.203584 EMBL:AY730764
IPI:IPI00471690 SMR:Q643W9 STRING:Q643W9 Ensembl:ENSRNOT00000042557
Genevestigator:Q643W9 Uniprot:Q643W9
Length = 217
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 71 SGSENHEGASGD-DQEQRPNKKKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKELSREL 127
SGS+ + + + E++ +K+R +R T Q+Q +E F+ +PD R++L+R +
Sbjct: 72 SGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRV 131
Query: 128 GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
L +V+ WFQN+R + + R+E L +N L
Sbjct: 132 NLTEARVQVWFQNRRAKFR----RNERAMLANKNASL 164
>ZFIN|ZDB-GENE-030904-9 [details] [associations]
symbol:vax1 "ventral anterior homeobox 1"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0061386 "closure of optic fissure"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0090259 "regulation of retinal ganglion cell axon
guidance" evidence=IMP] [GO:0021554 "optic nerve development"
evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-030904-9 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041 GO:GO:0000976
GO:GO:0061386 eggNOG:NOG323848 GeneTree:ENSGT00680000099870
GO:GO:0021554 CTD:11023 HOGENOM:HOG000049217 HOVERGEN:HBG007558
KO:K09318 EMBL:AY185348 EMBL:BC065951 IPI:IPI00512062
RefSeq:NP_919391.2 UniGene:Dr.134046 ProteinModelPortal:Q801E0
STRING:Q801E0 Ensembl:ENSDART00000031490 GeneID:373870
KEGG:dre:373870 InParanoid:Q801E0 OrthoDB:EOG4QVCD6
NextBio:20813407 Bgee:Q801E0 GO:GO:0090259 Uniprot:Q801E0
Length = 317
Score = 119 (46.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 87 RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
RP + + T Q+ +E F+ C + ++R EL+R+L L QVK WFQN+RT+ K
Sbjct: 91 RPKRTRT--SFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQK 148
Query: 147 TQHERHENTQLRT 159
++ ++++LR+
Sbjct: 149 K--DQGKDSELRS 159
Score = 48 (22.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 685 PDYVALLPS-GFAILPDGTSLHGANIGEAASGGS 717
P LLP G + L G++L G ++G A+GGS
Sbjct: 183 PGLPGLLPHCGSSSL--GSALRGPSLGITANGGS 214
Score = 40 (19.1 bits), Expect = 0.00089, Sum P(2) = 0.00088
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 380 GVAGNYNGALQVMTAEFQVPSPLVP 404
G+AG+ G LQ ++A + S P
Sbjct: 277 GMAGSLAGNLQELSARYLCSSAFEP 301
>TAIR|locus:2102107 [details] [associations]
symbol:HB20 "homeobox protein 20" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:AC008261 EMBL:AK228890 EMBL:BT029221
EMBL:AY087631 IPI:IPI00546192 RefSeq:NP_186771.1 UniGene:At.41313
HSSP:P14859 ProteinModelPortal:Q8LAT0 SMR:Q8LAT0 IntAct:Q8LAT0
PaxDb:Q8LAT0 PRIDE:Q8LAT0 EnsemblPlants:AT3G01220.1 GeneID:821232
KEGG:ath:AT3G01220 GeneFarm:3967 TAIR:At3g01220 eggNOG:NOG328135
InParanoid:Q8LAT0 OMA:SDINLEM PhylomeDB:Q8LAT0
ProtClustDB:CLSN2684985 Genevestigator:Q8LAT0 Uniprot:Q8LAT0
Length = 286
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 29/95 (30%), Positives = 52/95 (54%)
Query: 75 NHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK-ELSRELGLEPLQ 133
+ E S D +KK+ R Q++ +E F E + + +RK +L++ LG++P Q
Sbjct: 71 DEENLSDDGAHTMLGEKKK--RLQLEQVKALEKSF-ELGNKLEPERKIQLAKALGMQPRQ 127
Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
+ WFQN+R + KT+ + L+ + E L++DN
Sbjct: 128 IAIWFQNRRARWKTRQLERDYDSLKKQFESLKSDN 162
>TAIR|locus:2046263 [details] [associations]
symbol:HB21 "homeobox protein 21" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006950 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HSSP:P01366 EMBL:AC006135
EMBL:BT031362 IPI:IPI00520845 PIR:F84565 RefSeq:NP_179445.1
UniGene:At.52810 ProteinModelPortal:Q9ZU70 SMR:Q9ZU70
EnsemblPlants:AT2G18550.1 GeneID:816370 KEGG:ath:AT2G18550
GeneFarm:3961 TAIR:At2g18550 eggNOG:NOG270330 HOGENOM:HOG000034122
InParanoid:Q9ZU70 OMA:RVEDEYT PhylomeDB:Q9ZU70
ProtClustDB:CLSN2683051 ArrayExpress:Q9ZU70 Genevestigator:Q9ZU70
GermOnline:AT2G18550 Uniprot:Q9ZU70
Length = 220
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 34/105 (32%), Positives = 56/105 (53%)
Query: 82 DDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE-LSRELGLEPLQVKFWFQN 140
++ E N R + + Q++ +E F++ H + +RK+ L+ ELGL+P QV WFQN
Sbjct: 50 EEGENEGNGWFRKRKLSDEQVRMLEISFED-DHKLESERKDRLASELGLDPRQVAVWFQN 108
Query: 141 KRTQMKTQHERHENTQLR-----TENEKLRADN--MRYREALSNA 178
+R + K + E T+L+ T EK R D+ + +E L A
Sbjct: 109 RRARWKNKRVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEA 153
>ZFIN|ZDB-GENE-990415-238 [details] [associations]
symbol:rx3 "retinal homeobox gene 3" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0030900
"forebrain development" evidence=IMP] [GO:0001654 "eye development"
evidence=IMP] [GO:0001755 "neural crest cell migration"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021984 "adenohypophysis development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0048593 "camera-type eye morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-238 GO:GO:0005634 GO:GO:0001708 GO:GO:0001755
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0021984 eggNOG:NOG261733
GO:GO:0048596 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 KO:K09332
EMBL:AF001909 IPI:IPI00493738 RefSeq:NP_571302.1 UniGene:Dr.540
ProteinModelPortal:O42358 SMR:O42358 STRING:O42358 GeneID:30474
KEGG:dre:30474 CTD:30474 InParanoid:O42358 NextBio:20806867
ArrayExpress:O42358 Uniprot:O42358
Length = 292
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 28/89 (31%), Positives = 51/89 (57%)
Query: 78 GASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVK 135
G DD+ P KK R +R T Q+ E+E F++ +PD R+EL+ ++ L ++V+
Sbjct: 94 GKLSDDEN--PKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQ 151
Query: 136 FWFQNKRTQMKTQHERHENTQLRTENEKL 164
WFQN+R + + Q E+ E + ++ + +
Sbjct: 152 VWFQNRRAKWRRQ-EKLEVSSIKLQESSM 179
>UNIPROTKB|G1K2Z3 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
OMA:WGSAAPY EMBL:AADN02033985 EMBL:AADN02033987 EMBL:AADN02033986
Ensembl:ENSGALT00000005264 Uniprot:G1K2Z3
Length = 245
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 29/97 (29%), Positives = 54/97 (55%)
Query: 71 SGSENHEGASGD-DQEQRPNKKKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKELSREL 127
SGS+ + + + E++ +K+R +R T Q+Q +E F+ +PD R++L+R +
Sbjct: 72 SGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRV 131
Query: 128 GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
L +V+ WFQN+R + + R+E L ++N L
Sbjct: 132 NLTEARVQVWFQNRRAKFR----RNERAMLASKNASL 164
>UNIPROTKB|Q05437 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG267226
EMBL:D13433 EMBL:S69088 IPI:IPI00592701 PIR:I51226
RefSeq:NP_001007822.1 UniGene:Gga.1546 ProteinModelPortal:Q05437
SMR:Q05437 IntAct:Q05437 STRING:Q05437 GeneID:373941
KEGG:gga:373941 CTD:5396 HOVERGEN:HBG021349 InParanoid:Q05437
KO:K09329 OrthoDB:EOG4RR6J8 NextBio:20813473 Uniprot:Q05437
Length = 245
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 29/97 (29%), Positives = 54/97 (55%)
Query: 71 SGSENHEGASGD-DQEQRPNKKKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKELSREL 127
SGS+ + + + E++ +K+R +R T Q+Q +E F+ +PD R++L+R +
Sbjct: 72 SGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRV 131
Query: 128 GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
L +V+ WFQN+R + + R+E L ++N L
Sbjct: 132 NLTEARVQVWFQNRRAKFR----RNERAMLASKNASL 164
>ZFIN|ZDB-GENE-030131-9033 [details] [associations]
symbol:prrx1b "paired related homeobox 1b"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-030131-9033 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0010628 HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 HSSP:P10037
eggNOG:NOG267226 HOVERGEN:HBG021349 KO:K09329 OMA:WGSAAPY
EMBL:CU571309 EMBL:BC064671 IPI:IPI00499847 RefSeq:NP_956344.1
UniGene:Dr.76340 SMR:Q6P295 Ensembl:ENSDART00000061588
GeneID:337089 KEGG:dre:337089 CTD:337089 InParanoid:Q6P295
NextBio:20812053 Uniprot:Q6P295
Length = 245
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 29/97 (29%), Positives = 54/97 (55%)
Query: 71 SGSENHEGASGD-DQEQRPNKKKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKELSREL 127
SGS+ + + + E++ +K+R +R T Q+Q +E F+ +PD R++L+R +
Sbjct: 74 SGSDTTQQENEQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRV 133
Query: 128 GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
L +V+ WFQN+R + + R+E L ++N L
Sbjct: 134 NLTEARVQVWFQNRRAKFR----RNERAMLASKNASL 166
>UNIPROTKB|E1BBR5 [details] [associations]
symbol:PITX3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0070306
"lens fiber cell differentiation" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0002089 "lens morphogenesis in camera-type eye"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045893 GO:GO:0071542
GO:GO:0043565 GO:GO:0007626 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0002089 GO:GO:0070306
GeneTree:ENSGT00700000104438 CTD:5309 KO:K09357 OMA:LCKGGFA
EMBL:DAAA02058999 IPI:IPI00714094 RefSeq:NP_001179234.1
UniGene:Bt.74425 PRIDE:E1BBR5 Ensembl:ENSBTAT00000020847
GeneID:512000 KEGG:bta:512000 NextBio:20870203 Uniprot:E1BBR5
Length = 302
Score = 125 (49.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 28/95 (29%), Positives = 52/95 (54%)
Query: 63 EEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE 122
+E DS K+ G+ D ++ +++R H T Q+QE+EA F+ +PD R+E
Sbjct: 36 QEHSDSEKASVSLPGGSPEDGSLKKKQRRQRTH-FTSQQLQELEATFQRNRYPDMSTREE 94
Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
++ L +V+ WF+N+R + + + ER + +L
Sbjct: 95 IAVWTNLTEARVRVWFKNRRAKWR-KRERSQQAEL 128
Score = 40 (19.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 17/56 (30%), Positives = 22/56 (39%)
Query: 530 LAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATS 585
LA + V S + +SAS + T GT + PG P V S A S
Sbjct: 182 LASQPVFSPPSSISASMVPSGATAPGT-VPGHGALQGLGGGPPGLAPAAVSSGAVS 236
>MGI|MGI:98218 [details] [associations]
symbol:Prrx2 "paired related homeobox 2" species:10090 "Mus
musculus" [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0042472 "inner ear morphogenesis"
evidence=IGI] [GO:0042474 "middle ear morphogenesis" evidence=IGI]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IGI] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IGI] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IGI] [GO:0048844 "artery morphogenesis"
evidence=IGI] [GO:0051216 "cartilage development" evidence=IGI]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:98218 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0030326
GO:GO:0051216 HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701 GO:GO:0002053
GO:GO:0045880 GO:GO:0042474 HOVERGEN:HBG021349 KO:K09329
eggNOG:NOG309174 CTD:51450 EMBL:X52875 EMBL:X14572 IPI:IPI00319581
PIR:I48410 RefSeq:NP_033142.2 UniGene:Mm.1802
ProteinModelPortal:Q06348 SMR:Q06348 MINT:MINT-1782155
STRING:Q06348 PhosphoSite:Q06348 PRIDE:Q06348 GeneID:20204
KEGG:mmu:20204 InParanoid:Q06348 NextBio:297791 CleanEx:MM_PRRX2
Genevestigator:Q06348 GermOnline:ENSMUSG00000039476 Uniprot:Q06348
Length = 247
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 32/114 (28%), Positives = 57/114 (50%)
Query: 54 SESEIARLREEEFDSTKSGSENHEG-ASGDDQEQRPNKKKRYHRHT--QHQIQEMEAFFK 110
+E+ + RE S+ + + +G + + KK+R +R T Q+Q +E F+
Sbjct: 59 AEARVGAAREPSGGSSGTEAAPQDGDCPSPGRGTKRKKKQRRNRTTFNSSQLQALERVFE 118
Query: 111 ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
+PD R+EL+R + L +V+ WFQN+R + + R+E L T + L
Sbjct: 119 RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFR----RNERAMLATRSASL 168
>UNIPROTKB|F1NF72 [details] [associations]
symbol:F1NF72 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030902 "hindbrain
development" evidence=IEA] [GO:0030917 "midbrain-hindbrain boundary
development" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0043473 "pigmentation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00680000099870
PROSITE:PS00033 InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
EMBL:AADN02016916 IPI:IPI00812139 Ensembl:ENSGALT00000019794
OMA:ASNDEKR Uniprot:F1NF72
Length = 100
Score = 103 (41.3 bits), Expect = 0.00016, P = 0.00016
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 98 TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
T Q+Q ++A F+ + +++R+ L++EL L Q+K WFQNKR ++K
Sbjct: 11 TAEQLQRLKAEFQANRYITEQRRQSLAQELSLNESQIKIWFQNKRAKIK 59
>UNIPROTKB|P14839 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X16847 IPI:IPI00589688
PIR:S08303 ProteinModelPortal:P14839 SMR:P14839 Uniprot:P14839
Length = 84
Score = 103 (41.3 bits), Expect = 0.00016, P = 0.00016
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 88 PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
P ++ R +T++Q E+E F + ++R E++ L L Q+K WFQN+R + K
Sbjct: 6 PARRGR-QTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKK 64
Query: 148 QHERHENTQLRTENEKLRAD 167
+++ ++QL E E+ A+
Sbjct: 65 ENKLLSSSQLSAEEEEKTAE 84
>UNIPROTKB|F1SHT6 [details] [associations]
symbol:F1SHT6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:CU480612
ProteinModelPortal:F1SHT6 SMR:F1SHT6 Ensembl:ENSSSCT00000018180
OMA:RRYEISQ Uniprot:F1SHT6
Length = 93
Score = 103 (41.3 bits), Expect = 0.00016, P = 0.00016
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 87 RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
+ +KKR +T+HQ E+E F + ++R E+SR + L QVK WFQN+R ++K
Sbjct: 17 KSGRKKRCP-YTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLK 75
Query: 147 TQHERHENTQLRTEN 161
+ + +L T N
Sbjct: 76 KMNRENRIREL-TAN 89
>UNIPROTKB|G3ECA1 [details] [associations]
symbol:HoxA10 "Homebox A10" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295
GeneTree:ENSGT00700000104054 EMBL:CU570959 EMBL:HQ700342
RefSeq:NP_001231267.1 UniGene:Ssc.100927 UniGene:Ssc.26254
SMR:G3ECA1 Ensembl:ENSSSCT00000028043 GeneID:100620451
KEGG:ssc:100620451 OMA:GNTKGEN Uniprot:G3ECA1
Length = 94
Score = 103 (41.3 bits), Expect = 0.00016, P = 0.00016
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 87 RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
+ +KKR +T+HQ E+E F + ++R E+SR + L QVK WFQN+R ++K
Sbjct: 18 KSGRKKRCP-YTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLK 76
Query: 147 TQHERHENTQLRTEN 161
+ + +L T N
Sbjct: 77 KMNRENRIREL-TAN 90
>UNIPROTKB|G5E5Q0 [details] [associations]
symbol:BARX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042637 "catagen"
evidence=IEA] [GO:0014902 "myotube differentiation" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001502 "cartilage condensation" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0001502
GO:GO:0000976 GeneTree:ENSGT00700000104097 GO:GO:0042637
GO:GO:0014902 OMA:TQEPKAR EMBL:DAAA02063278
Ensembl:ENSBTAT00000027509 Uniprot:G5E5Q0
Length = 216
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 29/92 (31%), Positives = 50/92 (54%)
Query: 58 IARLREEEFDSTKSGSENHEGASGDDQEQRPNKKK-RYHR--HTQHQIQEMEAFFKECPH 114
++R E S ++ ENH + + ++ P +KK R R T+ Q+ +E F++ +
Sbjct: 35 LSRHPATEAASAEAPGENHGSSESETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKY 94
Query: 115 PDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
R +L++ LGL LQVK W+QN+R + K
Sbjct: 95 LSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWK 126
>TAIR|locus:2150901 [details] [associations]
symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
Length = 314
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 28/102 (27%), Positives = 55/102 (53%)
Query: 67 DSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE 126
D + G E++ S D +KK+ R Q++ +E F+ + +++ +L++
Sbjct: 93 DQDQVGEEDN--LSDDGSHMMLGEKKK--RLNLEQVRALEKSFELGNKLEPERKMQLAKA 148
Query: 127 LGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
LGL+P Q+ WFQN+R + KT+ + L+ + + L++DN
Sbjct: 149 LGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDN 190
>UNIPROTKB|J9P235 [details] [associations]
symbol:J9P235 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AAEX03000742
GeneTree:ENSGT00640000091698 Ensembl:ENSCAFT00000044561
Uniprot:J9P235
Length = 167
Score = 113 (44.8 bits), Expect = 0.00018, P = 0.00018
Identities = 20/84 (23%), Positives = 48/84 (57%)
Query: 84 QEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRT 143
+ Q+ +++KR T+ Q+ ++E F + P+P+ ++E++ +L + P ++ WF+N R
Sbjct: 2 KHQKHSQRKRT-MFTEKQLADLECLFSKNPYPNPSLQREMASKLEIHPTVLQVWFKNHRA 60
Query: 144 QMKTQHERHENTQLRTENEKLRAD 167
++K ++ +++T K D
Sbjct: 61 KLKKAKQQLSAMEVKTSYSKRNTD 84
>UNIPROTKB|E1C654 [details] [associations]
symbol:VAX1 "Ventral anterior homeobox 1" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:AADN02030950
EMBL:AADN02030951 EMBL:AADN02030952 IPI:IPI00682449
Ensembl:ENSGALT00000033072 Uniprot:E1C654
Length = 219
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 87 RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
RP + + T Q+ +E F+ C + ++R EL+R+L L QVK WFQN+RT+ K
Sbjct: 98 RPKRTRT--SFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQK 155
Query: 147 TQHERHENTQLRT 159
++ ++++LR+
Sbjct: 156 K--DQGKDSELRS 166
>UNIPROTKB|F1P5G0 [details] [associations]
symbol:VAX1 "Ventral anterior homeobox 1" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:AADN02030950
EMBL:AADN02030951 EMBL:AADN02030952 IPI:IPI01017344
Ensembl:ENSGALT00000015072 Uniprot:F1P5G0
Length = 220
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 87 RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
RP + + T Q+ +E F+ C + ++R EL+R+L L QVK WFQN+RT+ K
Sbjct: 98 RPKRTRT--SFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQK 155
Query: 147 TQHERHENTQLRT 159
++ ++++LR+
Sbjct: 156 K--DQGKDSELRS 166
>UNIPROTKB|Q5XKR4 [details] [associations]
symbol:OTP "Homeobox protein orthopedia" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0002052 "positive regulation of neuroblast
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021979 "hypothalamus cell
differentiation" evidence=IEA] [GO:0021985 "neurohypophysis
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976 GO:GO:0021879
GO:GO:0002052 HSSP:P06601 eggNOG:NOG256838 HOVERGEN:HBG001617
OrthoDB:EOG4FXR8D CTD:23440 EMBL:BC001800 IPI:IPI00029796
RefSeq:NP_115485.1 UniGene:Hs.202247 ProteinModelPortal:Q5XKR4
SMR:Q5XKR4 STRING:Q5XKR4 DMDM:74762283 PRIDE:Q5XKR4 DNASU:23440
Ensembl:ENST00000306422 GeneID:23440 KEGG:hsa:23440 UCSC:uc003kfg.3
GeneCards:GC05M076960 HGNC:HGNC:8518 HPA:HPA039365 MIM:604529
neXtProt:NX_Q5XKR4 PharmGKB:PA32844 HOGENOM:HOG000039976
InParanoid:Q5XKR4 OMA:RWATAGM PhylomeDB:Q5XKR4 GenomeRNAi:23440
NextBio:45713 Bgee:Q5XKR4 CleanEx:HS_OTP Genevestigator:Q5XKR4
GO:GO:0021979 GO:GO:0021985 Uniprot:Q5XKR4
Length = 325
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 48 DMTQNTSESEIARLREEEFDSTKS-GSENHEGASGDDQEQRPNKKKRYH-RHTQHQIQEM 105
D+T T S A L D K G + S Q+Q K+KR+ R T Q+ E+
Sbjct: 62 DIT--TVGSTPASLAVSAKDPDKQPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNEL 119
Query: 106 EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
E F + +PD R+EL+ +GL +V+ WFQN+R + K
Sbjct: 120 ERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWK 160
>UNIPROTKB|F2Z5H5 [details] [associations]
symbol:OTP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0021985
"neurohypophysis development" evidence=IEA] [GO:0021979
"hypothalamus cell differentiation" evidence=IEA] [GO:0021879
"forebrain neuron differentiation" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 GO:GO:0000976
GO:GO:0021879 GO:GO:0002052 OMA:RWATAGM GO:GO:0021979 GO:GO:0021985
EMBL:CU856635 RefSeq:XP_003123766.1 ProteinModelPortal:F2Z5H5
SMR:F2Z5H5 Ensembl:ENSSSCT00000015401 GeneID:100520724
KEGG:ssc:100520724 Uniprot:F2Z5H5
Length = 325
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 48 DMTQNTSESEIARLREEEFDSTKS-GSENHEGASGDDQEQRPNKKKRYH-RHTQHQIQEM 105
D+T T S A L D K G + S Q+Q K+KR+ R T Q+ E+
Sbjct: 62 DIT--TVGSTPASLAVSAKDPDKQPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNEL 119
Query: 106 EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
E F + +PD R+EL+ +GL +V+ WFQN+R + K
Sbjct: 120 ERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWK 160
>MGI|MGI:99835 [details] [associations]
symbol:Otp "orthopedia homolog (Drosophila)" species:10090
"Mus musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0021879 "forebrain neuron differentiation"
evidence=IMP] [GO:0021979 "hypothalamus cell differentiation"
evidence=IMP] [GO:0021985 "neurohypophysis development"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:99835 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0000976 GO:GO:0021879
GO:GO:0002052 eggNOG:NOG256838 HOVERGEN:HBG001617 OrthoDB:EOG4FXR8D
CTD:23440 HOGENOM:HOG000039976 OMA:RWATAGM GO:GO:0021979
GO:GO:0021985 EMBL:Y10413 IPI:IPI00114250 RefSeq:NP_035151.1
UniGene:Mm.42051 ProteinModelPortal:O09113 SMR:O09113 STRING:O09113
PRIDE:O09113 DNASU:18420 Ensembl:ENSMUST00000022195 GeneID:18420
KEGG:mmu:18420 UCSC:uc007rly.1 InParanoid:O09113 NextBio:294068
Bgee:O09113 CleanEx:MM_OTP Genevestigator:O09113
GermOnline:ENSMUSG00000021685 Uniprot:O09113
Length = 325
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 48 DMTQNTSESEIARLREEEFDSTKS-GSENHEGASGDDQEQRPNKKKRYH-RHTQHQIQEM 105
D+T T S A L D K G + S Q+Q K+KR+ R T Q+ E+
Sbjct: 62 DIT--TVGSTPASLAVSAKDPDKQPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNEL 119
Query: 106 EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
E F + +PD R+EL+ +GL +V+ WFQN+R + K
Sbjct: 120 ERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWK 160
>UNIPROTKB|G3V7E0 [details] [associations]
symbol:Otp "Protein Otp" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0021879
"forebrain neuron differentiation" evidence=IEA] [GO:0021979
"hypothalamus cell differentiation" evidence=IEA] [GO:0021985
"neurohypophysis development" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:727945 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 GO:GO:0000976
EMBL:CH473955 CTD:23440 OMA:RWATAGM RefSeq:NP_001093993.1
UniGene:Rn.7202 ProteinModelPortal:G3V7E0 SMR:G3V7E0 PRIDE:G3V7E0
Ensembl:ENSRNOT00000014036 GeneID:294640 KEGG:rno:294640
NextBio:638354 Uniprot:G3V7E0
Length = 325
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 48 DMTQNTSESEIARLREEEFDSTKS-GSENHEGASGDDQEQRPNKKKRYH-RHTQHQIQEM 105
D+T T S A L D K G + S Q+Q K+KR+ R T Q+ E+
Sbjct: 62 DIT--TVGSTPASLAVSAKDPDKQPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNEL 119
Query: 106 EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
E F + +PD R+EL+ +GL +V+ WFQN+R + K
Sbjct: 120 ERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWK 160
>FB|FBgn0024321 [details] [associations]
symbol:NK7.1 "NK7.1" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AE014297 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104206 HSSP:P14653 FlyBase:FBgn0024321
RefSeq:NP_001247103.1 RefSeq:NP_650357.2 RefSeq:NP_731904.1
SMR:Q9VFK4 IntAct:Q9VFK4 MINT:MINT-748602
EnsemblMetazoa:FBtr0082941 EnsemblMetazoa:FBtr0082942
EnsemblMetazoa:FBtr0306742 GeneID:41747 KEGG:dme:Dmel_CG8524
UCSC:CG8524-RA CTD:41747 InParanoid:Q9VFK4 OMA:NEAAEHK
GenomeRNAi:41747 NextBio:825376 Uniprot:Q9VFK4
Length = 721
Score = 128 (50.1 bits), Expect = 0.00019, P = 0.00019
Identities = 46/169 (27%), Positives = 73/169 (43%)
Query: 36 PTNMMEGQLHPLDMTQNTSE--SEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKR 93
PT + + M N+S S + + +ST +E+ + SG +R KKK
Sbjct: 340 PTGSSDSLMRDKLMANNSSSPGSNVNAQMQSNANSTLETTED-DSDSGSTDARR--KKKA 396
Query: 94 YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE--R 151
T QI E+E F+ + +R E+++ L + QVK WFQN+RT+ K Q
Sbjct: 397 RTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTN 456
Query: 152 HENTQLRTENEKLRADNMRYR--------EALSNASCPNCGGPTAIGEM 192
+E + ++ N K A + SNA+ P G I E+
Sbjct: 457 NEAAEHKSSNAKPGATGTATTTPSGEPTDKRSSNATSPTVGNAATIAEI 505
>FB|FBgn0001147 [details] [associations]
symbol:gsb-n "gooseberry-neuro" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=NAS] [GO:0007367
"segment polarity determination" evidence=IEP;NAS] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005667
"transcription factor complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 EMBL:AE013599
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007367
GO:GO:0000977 EMBL:AY071593 EMBL:M14941 EMBL:M14943 PIR:A26332
PIR:B43698 RefSeq:NP_523862.1 UniGene:Dm.5850
ProteinModelPortal:P09083 SMR:P09083 DIP:DIP-23099N IntAct:P09083
MINT:MINT-1723154 STRING:P09083 EnsemblMetazoa:FBtr0072461
GeneID:38004 KEGG:dme:Dmel_CG2692 CTD:38004 FlyBase:FBgn0001147
eggNOG:NOG326044 GeneTree:ENSGT00680000099553 HOGENOM:HOG000004133
InParanoid:P09083 KO:K09381 OMA:DMSSANS OrthoDB:EOG42BVRM
PhylomeDB:P09083 GenomeRNAi:38004 NextBio:806501 Bgee:P09083
GermOnline:CG2692 Uniprot:P09083
Length = 449
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 41/154 (26%), Positives = 70/154 (45%)
Query: 54 SESEIARLREEEFDSTKSGSENHE------GASGD--DQEQRPN----KKKRYHR--HTQ 99
S S I+RL ++ G +++ G D D E P +K+R R T
Sbjct: 132 STSSISRLLRGSDRGSEDGRKDYTINGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTA 191
Query: 100 HQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRT 159
Q++ +E F +PD R+EL++ L +++ WF N+R +++ +H N+ L
Sbjct: 192 EQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLR-KHSGGSNSGLSP 250
Query: 160 ENEKLRADNMRYREALSNASCPNCGGPTAIGEMS 193
N + N+ LS A+ P GP +G M+
Sbjct: 251 MNSG--SSNVGVGVGLSGATAPLGYGPLGVGSMA 282
>UNIPROTKB|A2VE85 [details] [associations]
symbol:PRRX1 "Paired related homeobox 1" species:9913 "Bos
taurus" [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0048844 "artery
morphogenesis" evidence=IEA] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IEA] [GO:0045880 "positive
regulation of smoothened signaling pathway" evidence=IEA]
[GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 GO:GO:0060021
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844
GO:GO:0048701 GeneTree:ENSGT00700000104279 GO:GO:0002053
GO:GO:0045880 GO:GO:0042474 eggNOG:NOG267226 CTD:5396
HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8 OMA:WGSAAPY
EMBL:DAAA02042867 EMBL:DAAA02042868 EMBL:BC133623 IPI:IPI00717328
RefSeq:NP_001075208.1 UniGene:Bt.78963 SMR:A2VE85
Ensembl:ENSBTAT00000006003 GeneID:540901 KEGG:bta:540901
InParanoid:A2VE85 NextBio:20878904 Uniprot:A2VE85
Length = 245
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 71 SGSENHEGASGD-DQEQRPNKKKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKELSREL 127
SGS+ + + + E++ +K+R +R T Q+Q +E F+ +PD R++L+R +
Sbjct: 72 SGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRV 131
Query: 128 GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
L +V+ WFQN+R + + R+E L +N L
Sbjct: 132 NLTEARVQVWFQNRRAKFR----RNERAMLANKNASL 164
>UNIPROTKB|E2RGD6 [details] [associations]
symbol:PRRX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0048844
"artery morphogenesis" evidence=IEA] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IEA] [GO:0045880 "positive
regulation of smoothened signaling pathway" evidence=IEA]
[GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 GO:GO:0060021 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0045880
GO:GO:0042474 CTD:5396 KO:K09329 OMA:WGSAAPY EMBL:AAEX03005214
EMBL:AAEX03005215 RefSeq:XP_850725.1 ProteinModelPortal:E2RGD6
SMR:E2RGD6 Ensembl:ENSCAFT00000023797 GeneID:609105 KEGG:cfa:609105
NextBio:20894722 Uniprot:E2RGD6
Length = 245
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 71 SGSENHEGASGD-DQEQRPNKKKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKELSREL 127
SGS+ + + + E++ +K+R +R T Q+Q +E F+ +PD R++L+R +
Sbjct: 72 SGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRV 131
Query: 128 GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
L +V+ WFQN+R + + R+E L +N L
Sbjct: 132 NLTEARVQVWFQNRRAKFR----RNERAMLANKNASL 164
>UNIPROTKB|P54821 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0003713 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 GO:GO:0060021
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844
GO:GO:0048701 GO:GO:0002053 GO:GO:0045880 GO:GO:0042474
eggNOG:NOG267226 CTD:5396 HOVERGEN:HBG021349 KO:K09329
OrthoDB:EOG4RR6J8 EMBL:AB451463 EMBL:Z97200 EMBL:BC074993
EMBL:M95929 IPI:IPI00008822 IPI:IPI00221036 RefSeq:NP_008833.1
RefSeq:NP_073207.1 UniGene:Hs.283416 ProteinModelPortal:P54821
SMR:P54821 STRING:P54821 PhosphoSite:P54821 DMDM:6174916
PRIDE:P54821 DNASU:5396 Ensembl:ENST00000239461
Ensembl:ENST00000367760 GeneID:5396 KEGG:hsa:5396 UCSC:uc001ghe.3
UCSC:uc001ghf.3 GeneCards:GC01P170632 HGNC:HGNC:9142 HPA:HPA051084
MIM:167420 MIM:202650 neXtProt:NX_P54821 Orphanet:990
PharmGKB:PA33466 InParanoid:P54821 OMA:WGSAAPY PhylomeDB:P54821
ChiTaRS:PRRX1 GenomeRNAi:5396 NextBio:20925 ArrayExpress:P54821
Bgee:P54821 CleanEx:HS_PRRX1 Genevestigator:P54821
GermOnline:ENSG00000116132 Uniprot:P54821
Length = 245
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 71 SGSENHEGASGD-DQEQRPNKKKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKELSREL 127
SGS+ + + + E++ +K+R +R T Q+Q +E F+ +PD R++L+R +
Sbjct: 72 SGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRV 131
Query: 128 GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
L +V+ WFQN+R + + R+E L +N L
Sbjct: 132 NLTEARVQVWFQNRRAKFR----RNERAMLANKNASL 164
>MGI|MGI:97712 [details] [associations]
symbol:Prrx1 "paired related homeobox 1" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IGI]
[GO:0042472 "inner ear morphogenesis" evidence=IGI] [GO:0042474
"middle ear morphogenesis" evidence=IGI;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045880 "positive
regulation of smoothened signaling pathway" evidence=IGI]
[GO:0048701 "embryonic cranial skeleton morphogenesis"
evidence=IGI;IMP] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IGI;IMP] [GO:0048844 "artery morphogenesis"
evidence=IGI;IMP] [GO:0051216 "cartilage development"
evidence=IGI;IMP] [GO:0060021 "palate development" evidence=IMP]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:97712 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0042472 GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518
GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0048844 GO:GO:0048701 GeneTree:ENSGT00700000104279
GO:GO:0002053 GO:GO:0045880 GO:GO:0042474 eggNOG:NOG267226 CTD:5396
HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8 OMA:WGSAAPY
ChiTaRS:PRRX1 EMBL:L06502 EMBL:U03873 EMBL:X59725 EMBL:BC092372
IPI:IPI00118248 IPI:IPI00230653 PIR:I48902 PIR:S26076
RefSeq:NP_035257.1 RefSeq:NP_783617.2 UniGene:Mm.288642
ProteinModelPortal:P63013 SMR:P63013 IntAct:P63013 STRING:P63013
PhosphoSite:P63013 PRIDE:P63013 Ensembl:ENSMUST00000027878
Ensembl:ENSMUST00000075805 GeneID:18933 KEGG:mmu:18933
UCSC:uc007dhh.1 UCSC:uc007dhi.1 InParanoid:P63013 NextBio:295248
Bgee:P63013 CleanEx:MM_PRRX1 Genevestigator:P63013
GermOnline:ENSMUSG00000026586 Uniprot:P63013
Length = 245
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 71 SGSENHEGASGD-DQEQRPNKKKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKELSREL 127
SGS+ + + + E++ +K+R +R T Q+Q +E F+ +PD R++L+R +
Sbjct: 72 SGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRV 131
Query: 128 GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
L +V+ WFQN+R + + R+E L +N L
Sbjct: 132 NLTEARVQVWFQNRRAKFR----RNERAMLANKNASL 164
>RGD|628884 [details] [associations]
symbol:Prrx1 "paired related homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA;ISO] [GO:0042472 "inner ear
morphogenesis" evidence=IEA;ISO] [GO:0042474 "middle ear
morphogenesis" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IEA;ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0048844 "artery morphogenesis" evidence=IEA;ISO] [GO:0051216
"cartilage development" evidence=IEA;ISO] [GO:0060021 "palate
development" evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:628884 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 GO:GO:0060021
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844
GO:GO:0048701 GeneTree:ENSGT00700000104279 GO:GO:0002053
GO:GO:0045880 GO:GO:0042474 eggNOG:NOG267226 CTD:5396
HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8 OMA:WGSAAPY
EMBL:S82911 IPI:IPI00198569 RefSeq:NP_722543.1 UniGene:Rn.203584
ProteinModelPortal:P63014 SMR:P63014 STRING:P63014
Ensembl:ENSRNOT00000004950 GeneID:266813 KEGG:rno:266813
UCSC:RGD:628884 InParanoid:P63014 NextBio:624741
ArrayExpress:P63014 Genevestigator:P63014
GermOnline:ENSRNOG00000003720 Uniprot:P63014
Length = 245
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 71 SGSENHEGASGD-DQEQRPNKKKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKELSREL 127
SGS+ + + + E++ +K+R +R T Q+Q +E F+ +PD R++L+R +
Sbjct: 72 SGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRV 131
Query: 128 GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
L +V+ WFQN+R + + R+E L +N L
Sbjct: 132 NLTEARVQVWFQNRRAKFR----RNERAMLANKNASL 164
>RGD|621233 [details] [associations]
symbol:Cdx1 "caudal type homeo box 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007389
"pattern specification process" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0060349 "bone
morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621233 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:M91450 IPI:IPI00766495 PIR:S27397 ProteinModelPortal:Q05095
SMR:Q05095 STRING:Q05095 UCSC:RGD:621233 InParanoid:Q05095
ArrayExpress:Q05095 Genevestigator:Q05095
GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 102 (41.0 bits), Expect = 0.00021, P = 0.00021
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 91 KKRYHR-HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
K +Y +T HQ E+E F + +++ EL+ LGL QVK WFQN+R + + +
Sbjct: 5 KDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVN 64
Query: 150 ERHENTQLRTENEKL 164
++ + Q + + + +
Sbjct: 65 KKKQQQQQQQQQQPM 79
>UNIPROTKB|Q05095 [details] [associations]
symbol:Cdx1 "Homeobox protein CDX-1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621233
GO:GO:0005634 GO:GO:0009952 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 EMBL:M91450 IPI:IPI00766495
PIR:S27397 ProteinModelPortal:Q05095 SMR:Q05095 STRING:Q05095
UCSC:RGD:621233 InParanoid:Q05095 ArrayExpress:Q05095
Genevestigator:Q05095 GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 102 (41.0 bits), Expect = 0.00021, P = 0.00021
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 91 KKRYHR-HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
K +Y +T HQ E+E F + +++ EL+ LGL QVK WFQN+R + + +
Sbjct: 5 KDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVN 64
Query: 150 ERHENTQLRTENEKL 164
++ + Q + + + +
Sbjct: 65 KKKQQQQQQQQQQPM 79
>UNIPROTKB|E1BM14 [details] [associations]
symbol:LHX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 KO:K09373 CTD:9355 EMBL:DAAA02032103
IPI:IPI00694370 RefSeq:NP_001178104.1 UniGene:Bt.107855
PRIDE:E1BM14 Ensembl:ENSBTAT00000014582 GeneID:783763
KEGG:bta:783763 NextBio:20926288 Uniprot:E1BM14
Length = 406
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 75 NHEGASGDDQEQR-PNKKKRYHRHTQ---HQIQEMEAFFKECPHPDDKQRKELSRELGLE 130
N A D++Q P+ +K T HQ++ M+++F +PD K K+L+++ GL
Sbjct: 247 NENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLT 306
Query: 131 PLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREA--LSNASCPNCGGPTA 188
++ WFQN R + + R ENT + E A LSNAS PT
Sbjct: 307 KRVLQVWFQNARAKFRRNLLRQENTGVDKSTEAALQTGTPSGPASELSNASLSPSSTPTT 366
Query: 189 IGEMS 193
+ +++
Sbjct: 367 LTDLT 371
>UNIPROTKB|E2RPC3 [details] [associations]
symbol:LHX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 KO:K09373 CTD:9355 OMA:CNENDAE
EMBL:AAEX03006892 RefSeq:XP_863668.2 Ensembl:ENSCAFT00000032214
GeneID:491340 KEGG:cfa:491340 Uniprot:E2RPC3
Length = 406
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 75 NHEGASGDDQEQR-PNKKKRYHRHTQ---HQIQEMEAFFKECPHPDDKQRKELSRELGLE 130
N A D++Q P+ +K T HQ++ M+++F +PD K K+L+++ GL
Sbjct: 247 NENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLT 306
Query: 131 PLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREA--LSNASCPNCGGPTA 188
++ WFQN R + + R ENT + E A LSNAS PT
Sbjct: 307 KRVLQVWFQNARAKFRRNLLRQENTGVDKSTEAALQTGTPSGPASELSNASLSPSSTPTT 366
Query: 189 IGEMS 193
+ +++
Sbjct: 367 LTDLT 371
>UNIPROTKB|C4TJC6 [details] [associations]
symbol:Lhx2 "LIM homeobox protein 2" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0021978
"telencephalon regionalization" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0007498
"mesoderm development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 GO:GO:0007498 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0021978 GO:GO:0000988
GO:GO:2000678 CTD:9355 OrthoDB:EOG4G4GQK OMA:CNENDAE EMBL:CU570921
EMBL:AB473486 RefSeq:NP_001163990.1 UniGene:Ssc.71156 STRING:C4TJC6
Ensembl:ENSSSCT00000006141 GeneID:100156063 KEGG:ssc:100156063
Uniprot:C4TJC6
Length = 406
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 75 NHEGASGDDQEQR-PNKKKRYHRHTQ---HQIQEMEAFFKECPHPDDKQRKELSRELGLE 130
N A D++Q P+ +K T HQ++ M+++F +PD K K+L+++ GL
Sbjct: 247 NENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLT 306
Query: 131 PLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREA--LSNASCPNCGGPTA 188
++ WFQN R + + R ENT + E A LSNAS PT
Sbjct: 307 KRVLQVWFQNARAKFRRNLLRQENTGVDKSTEAALQTGTPSGPASELSNASLSPSSTPTT 366
Query: 189 IGEMS 193
+ +++
Sbjct: 367 LTDLT 371
>FB|FBgn0000061 [details] [associations]
symbol:al "aristaless" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;NAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;NAS] [GO:0007449 "proximal/distal pattern formation,
imaginal disc" evidence=NAS] [GO:0048800 "antennal morphogenesis"
evidence=IMP] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0035015
"elongation of arista core" evidence=IMP] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IEP] [GO:0035218
"leg disc development" evidence=IMP] [GO:0022416 "chaeta
development" evidence=IMP] [GO:0043234 "protein complex"
evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA;IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0007480 "imaginal
disc-derived leg morphogenesis" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043234
EMBL:AE014134 GO:GO:0003700 GO:GO:0045747 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0022416 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 EMBL:L08401
EMBL:AY121696 PIR:A40685 RefSeq:NP_722629.1 UniGene:Dm.6423
PDB:3A01 PDB:3A02 PDB:3LNQ PDBsum:3A01 PDBsum:3A02 PDBsum:3LNQ
ProteinModelPortal:Q06453 SMR:Q06453 DIP:DIP-23247N IntAct:Q06453
MINT:MINT-827785 STRING:Q06453 EnsemblMetazoa:FBtr0078053
GeneID:33208 KEGG:dme:Dmel_CG3935 UCSC:CG3935-RA CTD:33208
FlyBase:FBgn0000061 eggNOG:NOG313402 InParanoid:Q06453 KO:K09452
OMA:FTHLGFQ OrthoDB:EOG41ZCSM PhylomeDB:Q06453
EvolutionaryTrace:Q06453 GenomeRNAi:33208 NextBio:782439
Bgee:Q06453 GermOnline:CG3935 GO:GO:0000976 GO:GO:0035015
GO:GO:0007480 Uniprot:Q06453
Length = 408
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 68 STKSGSENHEGASGDDQ----EQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRK 121
S SG N + G+ E P +K+R +R T Q++E+E F +PD R+
Sbjct: 57 SGASGGTNSPVSDGNSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 116
Query: 122 ELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
EL+ ++GL +++ WFQN+R + + Q +
Sbjct: 117 ELAMKIGLTEARIQVWFQNRRAKWRKQEK 145
>UNIPROTKB|F1NUP3 [details] [associations]
symbol:F1NUP3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0007517 "muscle organ development"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048066 "developmental pigmentation"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0060594 "mammary gland specification" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
EMBL:AADN02024154 EMBL:AADN02024155 EMBL:AADN02024156
EMBL:AADN02024157 EMBL:AADN02024158 IPI:IPI00591508
Ensembl:ENSGALT00000040854 ArrayExpress:F1NUP3 Uniprot:F1NUP3
Length = 491
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 35/110 (31%), Positives = 57/110 (51%)
Query: 43 QLHPLDMTQNTSESEIARLREEEFDSTK-SGSENHEGASGDDQEQRPNKKK-RYHR--HT 98
QLH L M + S+ R + TK S +++ EG+ D + P K+K R R T
Sbjct: 177 QLHRLQMGKTRQSSK--RNPQGWSSKTKASAAQSDEGSDIDSEPDLPLKRKQRRSRTTFT 234
Query: 99 QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
Q++E+E F+ +PD R+EL++ L +V+ WF N+R + + Q
Sbjct: 235 AEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 284
>ZFIN|ZDB-GENE-050208-140 [details] [associations]
symbol:alx4b "aristaless-like homeobox 4b"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-050208-140 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 HOVERGEN:HBG004214 eggNOG:NOG309608
OrthoDB:EOG4ZGPCG EMBL:BC135029 IPI:IPI00639059
RefSeq:NP_001082826.1 UniGene:Dr.90982 ProteinModelPortal:A4IGC5
SMR:A4IGC5 GeneID:497424 KEGG:dre:497424 CTD:497424
NextBio:20866003 Uniprot:A4IGC5
Length = 364
Score = 123 (48.4 bits), Expect = 0.00023, P = 0.00023
Identities = 28/85 (32%), Positives = 49/85 (57%)
Query: 78 GASGDDQEQRPNK-KKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 134
G++ D E NK KKR +R T +Q++E+E F++ +PD R++L+ L +V
Sbjct: 156 GSALDKSEAESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARV 215
Query: 135 KFWFQNKRTQMKTQHERHENTQLRT 159
+ WFQN+R + + + + Q+RT
Sbjct: 216 QVWFQNRRAKWRKRERFGQMQQVRT 240
>UNIPROTKB|F1N4L6 [details] [associations]
symbol:ARGFX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 OMA:MQDTQWE
GeneTree:ENSGT00700000104273 EMBL:DAAA02001583 IPI:IPI00693997
Ensembl:ENSBTAT00000002930 Uniprot:F1N4L6
Length = 236
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 29/83 (34%), Positives = 44/83 (53%)
Query: 90 KKKRYHRHTQ--H-QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
K K+ H T H Q +E+EA F PD ++EL+ +L L VK WF+N+R +MK
Sbjct: 8 KWKKSHERTSFTHTQYKELEALFSCNMFPDKNLQRELALKLNLPESTVKIWFRNRRFKMK 67
Query: 147 TQHERHENTQLRTENEKLRADNM 169
Q E L+ ++ L A ++
Sbjct: 68 KQQREQEQQSLKPPSQVLPAKDV 90
>UNIPROTKB|G3N0G6 [details] [associations]
symbol:LHX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0021978
"telencephalon regionalization" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0007498
"mesoderm development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 GO:GO:0007498 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
GeneTree:ENSGT00680000099670 GO:GO:0021978 GO:GO:0000988
GO:GO:2000678 OMA:CNENDAE EMBL:DAAA02032103
Ensembl:ENSBTAT00000065104 Uniprot:G3N0G6
Length = 427
Score = 124 (48.7 bits), Expect = 0.00023, P = 0.00023
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 75 NHEGASGDDQEQR-PNKKKRYHRHTQ---HQIQEMEAFFKECPHPDDKQRKELSRELGLE 130
N A D++Q P+ +K T HQ++ M+++F +PD K K+L+++ GL
Sbjct: 247 NENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLT 306
Query: 131 PLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREA--LSNASCPNCGGPTA 188
++ WFQN R + + R ENT + E A LSNAS PT
Sbjct: 307 KRVLQVWFQNARAKFRRNLLRQENTGVDKSTEAALQTGTPSGPASELSNASLSPSSTPTT 366
Query: 189 IGEMS 193
+ +++
Sbjct: 367 LTDLT 371
>UNIPROTKB|Q05917 [details] [associations]
symbol:EN2 "Homeobox protein engrailed-2" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030175 "filopodium" evidence=IDA] [GO:0030027 "lamellipodium"
evidence=IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0045727 "positive regulation of translation" evidence=IDA]
[GO:0042327 "positive regulation of phosphorylation" evidence=IDA]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007411 GO:GO:0003700 GO:GO:0030027
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030175 GO:GO:0030426 GO:GO:0045727 GO:GO:0000976
GO:GO:0042327 PROSITE:PS00033 HOVERGEN:HBG005975 InterPro:IPR019549
InterPro:IPR019737 Pfam:PF10525 KO:K09319 EMBL:L12696 EMBL:L12697
IPI:IPI00579837 PIR:F48423 RefSeq:NP_001254648.1 UniGene:Gga.56328
GeneID:100859435 KEGG:gga:100859435 CTD:2020 Uniprot:Q05917
Length = 289
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 84 QEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 141
+++ PNK+ + R T Q+Q ++A F+ + +++R+ L++ELGL Q+K WFQNK
Sbjct: 192 KKKNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQIKIWFQNK 251
Query: 142 RTQMK 146
R ++K
Sbjct: 252 RAKIK 256
>UNIPROTKB|F1NMY3 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007625
"grooming behavior" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104332
OMA:MERAQEV EMBL:AADN02070205 EMBL:AADN02070206 EMBL:AADN02027051
EMBL:AADN02027057 EMBL:AADN02027058 EMBL:AADN02027059
EMBL:AADN02027047 EMBL:AADN02027048 EMBL:AADN02027049
EMBL:AADN02027050 EMBL:AADN02027052 EMBL:AADN02027053
EMBL:AADN02027054 EMBL:AADN02027055 EMBL:AADN02027056
EMBL:AADN02027060 EMBL:AADN02027061 EMBL:AADN02027062
EMBL:AADN02027063 EMBL:AADN02027064 EMBL:AADN02027065
EMBL:AADN02027066 EMBL:AADN02027067 EMBL:AADN02027068
EMBL:AADN02027069 EMBL:AADN02070203 EMBL:AADN02070204
EMBL:AADN02073361 IPI:IPI00572938 Ensembl:ENSGALT00000028037
Uniprot:F1NMY3
Length = 240
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 27/88 (30%), Positives = 47/88 (53%)
Query: 86 QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
Q +++ ++++Q E+E F P+ K+R E+S LGL QVK WFQN+R +
Sbjct: 140 QAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKW 199
Query: 146 KTQHERHENTQLRTENEKLRADNMRYRE 173
K ++ + + + E E+L R +E
Sbjct: 200 KKENNKDKFPSSKCEQEELEKQMERAQE 227
>ZFIN|ZDB-GENE-980528-2060 [details] [associations]
symbol:gsc "goosecoid" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEP] [GO:0007420
"brain development" evidence=IGI] [GO:0021999 "neural plate
anterior/posterior regionalization" evidence=IGI] [GO:0009953
"dorsal/ventral pattern formation" evidence=IGI;IDA] [GO:0009948
"anterior/posterior axis specification" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980528-2060 GO:GO:0005634 GO:GO:0007420 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009948
GO:GO:0009950 GO:GO:0021999 HOVERGEN:HBG005921 OMA:PVGPSCC
GeneTree:ENSGT00700000104273 EMBL:AL772209 IPI:IPI00487794
UniGene:Dr.289 SMR:Q7ZZR4 Ensembl:ENSDART00000082085
InParanoid:Q7ZZR4 Uniprot:Q7ZZR4
Length = 240
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 26/86 (30%), Positives = 50/86 (58%)
Query: 90 KKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRT---- 143
++KR HR T Q++ +E F+E +PD R++L+R++ L +V+ WF+N+R
Sbjct: 144 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR 203
Query: 144 QMKTQHERHENTQLRTENEKLRADNM 169
Q ++ E EN+Q ++ K ++ +
Sbjct: 204 QKRSSSEESENSQKWNKSTKTTSEKI 229
>UNIPROTKB|H0YIZ3 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 EMBL:AL590369 HGNC:HGNC:21338
ChiTaRS:PRRX2 Ensembl:ENST00000557730 Uniprot:H0YIZ3
Length = 166
Score = 112 (44.5 bits), Expect = 0.00025, P = 0.00025
Identities = 32/111 (28%), Positives = 53/111 (47%)
Query: 81 GDDQEQRPNKKKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWF 138
G + KK+R +R T Q+Q +E F+ +PD R+EL+R + L +V+ WF
Sbjct: 8 GRGSAAKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWF 67
Query: 139 QNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAI 189
QN+R + + R+E L + + L + A+ P PTA+
Sbjct: 68 QNRRAKFR----RNERAMLASRSASL-LKSYSQEAAIEQPVAPR---PTAL 110
>UNIPROTKB|G3V5W7 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002052 "positive regulation
of neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048505 "regulation of timing of cell
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0007435
GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 GO:GO:0000790 GO:GO:0006366 GO:GO:0000981
GO:GO:0033365 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
GO:GO:0030858 GO:GO:0007224 GO:GO:0001709 GO:GO:0002052
GO:GO:0009950 GO:GO:0021797 GO:GO:0048596 GO:GO:0023019
GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796 GO:GO:0021913
GO:GO:0032808 GO:GO:0021798 GO:GO:0048505 GO:GO:0021905
GO:GO:0048708 GO:GO:0021912 GO:GO:0021902 GO:GO:0021778
GO:GO:0003322 GO:GO:0021918 EMBL:Z95332 HGNC:HGNC:8620
ProteinModelPortal:G3V5W7 SMR:G3V5W7 Ensembl:ENST00000531910
ArrayExpress:G3V5W7 Bgee:G3V5W7 Uniprot:G3V5W7
Length = 162
Score = 111 (44.1 bits), Expect = 0.00025, P = 0.00025
Identities = 27/99 (27%), Positives = 52/99 (52%)
Query: 67 DSTKSGSENHEGASGDDQEQRPNKKKRYHRH----TQHQIQEMEAFFKECPHPDDKQRKE 122
++T S S N G D+ + R K++ R+ TQ QI+ +E F+ +PD R+
Sbjct: 49 ENTNSISSN--GEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARER 106
Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTEN 161
L+ ++ L +++ WF N+R + + + E+ N + + N
Sbjct: 107 LAAKIDLPEARIQVWFSNRRAKWRRE-EKLRNQRRQASN 144
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 101 (40.6 bits), Expect = 0.00026, P = 0.00026
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 91 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
K+ +T+ Q+ E+E F + ++R E++ L L Q+K WFQN+R + K H+
Sbjct: 11 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHK 70
Query: 151 RHENTQLRT 159
NT++R+
Sbjct: 71 L-PNTKIRS 78
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 101 (40.6 bits), Expect = 0.00026, P = 0.00026
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 87 RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
R +KKR +T+HQ E+E F + +R E++R L L QVK WFQN+R +MK
Sbjct: 44 RSTRKKRCP-YTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 102
>FB|FBgn0004854 [details] [associations]
symbol:B-H2 "BarH2" species:7227 "Drosophila melanogaster"
[GO:0008052 "sensory organ boundary specification" evidence=IMP]
[GO:0008057 "eye pigment granule organization" evidence=IMP]
[GO:0001751 "compound eye photoreceptor cell differentiation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=IEA;IC;NAS] [GO:0008407 "chaeta morphogenesis"
evidence=IMP] [GO:0007455 "eye-antennal disc morphogenesis"
evidence=IMP] [GO:0007479 "leg disc proximal/distal pattern
formation" evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046331 "lateral
inhibition" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016055
GO:GO:0003677 EMBL:AE014298 GO:GO:0007601 GO:GO:0043565
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0000122
GO:GO:0046331 GO:GO:0001751 GO:GO:0008057 GO:GO:0007479
GO:GO:0008407 GO:GO:0007455 GeneTree:ENSGT00700000104206
eggNOG:NOG263484 GO:GO:0008052 EMBL:M82884 EMBL:M82887 EMBL:M82885
EMBL:M82886 EMBL:BT022144 PIR:A41726 PIR:S27806 RefSeq:NP_523386.1
UniGene:Dm.2611 ProteinModelPortal:Q24256 SMR:Q24256 STRING:Q24256
EnsemblMetazoa:FBtr0074429 GeneID:32723 KEGG:dme:Dmel_CG5488
UCSC:CG5488-RA CTD:32723 FlyBase:FBgn0004854 InParanoid:Q24256
OMA:ANKLELS OrthoDB:EOG4R22BQ PhylomeDB:Q24256 ChiTaRS:B-H2
GenomeRNAi:32723 NextBio:780043 Bgee:Q24256 GermOnline:CG5488
Uniprot:Q24256
Length = 645
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 35/102 (34%), Positives = 56/102 (54%)
Query: 50 TQNTSESEIARLREEEFD-STKSGSENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEME 106
T + S+S+ ++++ D S K+GS + G S +KK+R R T HQ+Q +E
Sbjct: 338 TIDDSDSDDCGGKDDDGDDSMKNGSSAN-GDSSSHLSLSLSKKQRKARTAFTDHQLQTLE 396
Query: 107 AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
F+ + + R EL+ +L L QVK W+QN+RT+ K Q
Sbjct: 397 KSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQ 438
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 30/103 (29%), Positives = 54/103 (52%)
Query: 64 EEFDSTKSGSENHEGASGDD--QEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK 121
EE + + E DD +Q P KK+R T Q+ +E F+ + +++
Sbjct: 40 EETSKRRPFFSSPEDLYDDDFYDDQLPEKKRRL---TTEQVHLLEKSFETENKLEPERKT 96
Query: 122 ELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
+L+++LGL+P QV WFQN+R + KT+ + L++ ++L
Sbjct: 97 QLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQL 139
>WB|WBGene00000446 [details] [associations]
symbol:ceh-23 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:FO080278
eggNOG:NOG257690 GeneTree:ENSGT00680000099625 EMBL:L19249
PIR:S44907 RefSeq:NP_498700.1 ProteinModelPortal:P34663 SMR:P34663
STRING:P34663 EnsemblMetazoa:ZK652.5 GeneID:176096
KEGG:cel:CELE_ZK652.5 UCSC:ZK652.5 CTD:176096 WormBase:ZK652.5
HOGENOM:HOG000076961 InParanoid:P34663 OMA:KARTIYG NextBio:891100
Uniprot:P34663
Length = 305
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 89 NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ-MKT 147
N +K + Q Q++E FK + +R+ L++ LGL P QV+ WFQN+R++ +
Sbjct: 210 NHRKARTIYGTTQTQQLEDMFKGQMYVVGAERENLAQRLGLSPSQVRIWFQNRRSKHRRK 269
Query: 148 QHERHENTQLRTENEKLRAD 167
Q E ++T L ++E++ D
Sbjct: 270 QQEEQQSTTLEEKSEEIGKD 289
>ZFIN|ZDB-GENE-030904-8 [details] [associations]
symbol:vax2 "ventral anterior homeobox 2"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0030900 "forebrain
development" evidence=ISS] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0061386 "closure of optic fissure"
evidence=IMP] [GO:0090259 "regulation of retinal ganglion cell axon
guidance" evidence=IMP] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0021554 "optic nerve
development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-030904-8 GO:GO:0005634 GO:GO:0016055 GO:GO:0030900
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0060041 GO:GO:0000976 GO:GO:0061386 eggNOG:NOG309408
GeneTree:ENSGT00680000099870 GO:GO:0021554 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 GO:GO:0090259
EMBL:AY183363 IPI:IPI00501587 RefSeq:NP_919390.1 UniGene:Dr.88632
ProteinModelPortal:Q801E1 STRING:Q801E1 Ensembl:ENSDART00000081620
GeneID:373869 KEGG:dre:373869 CTD:25806 InParanoid:Q801E1
OMA:LSAVHRT NextBio:20813406 ArrayExpress:Q801E1 Bgee:Q801E1
Uniprot:Q801E1
Length = 307
Score = 124 (48.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 87 RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
RP + + T Q+ +E F+ C + ++R EL+R+L L QVK WFQN+RT+ K
Sbjct: 102 RPKRTRT--SFTAEQLYRLELEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQK 159
Query: 147 TQHERHENTQLRTENEKLRADNM 169
+ + + + +E L N+
Sbjct: 160 KDQTKDTDKRSSSTSESLATCNI 182
Score = 39 (18.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 418 GEGTWAVVDVSLDNLRPSPAVR------CRRRP--SGCLIQEMPNGY 456
G GT+ + SL PSP + C P SG E+P+GY
Sbjct: 235 GSGTFGLSLSSLSGTPPSPRLGVPPPSLCFTMPLLSGAH-HELPSGY 280
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 121 (47.7 bits), Expect = 0.00029, P = 0.00029
Identities = 33/109 (30%), Positives = 55/109 (50%)
Query: 68 STKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL 127
S GS++ +G+ D R KK R ++ Q +E FKE + KQ+ L+++L
Sbjct: 142 SLGGGSDDEDGSGNGDDSSR--KKLRL---SKEQALVLEETFKEHSTLNPKQKMALAKQL 196
Query: 128 GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALS 176
L QV+ WFQN+R + K + + L+ E L +N R ++ +S
Sbjct: 197 NLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVS 245
>UNIPROTKB|E1C639 [details] [associations]
symbol:Gga.30007 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
EMBL:AADN02006258 IPI:IPI00598714 Ensembl:ENSGALT00000020505
OMA:WRKHEKF Uniprot:E1C639
Length = 160
Score = 110 (43.8 bits), Expect = 0.00029, P = 0.00029
Identities = 22/69 (31%), Positives = 40/69 (57%)
Query: 86 QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
+R K++ T Q+QE+E F+ +PD R +L+ ++ L +V+ WFQN+R +
Sbjct: 78 ERKGKRRIRTTFTAEQLQELEKIFQVTHYPDVHIRNQLAAKINLPEARVQIWFQNQRAKW 137
Query: 146 KTQHERHEN 154
+ +HE+ N
Sbjct: 138 R-KHEKFGN 145
>TAIR|locus:2129061 [details] [associations]
symbol:HAT1 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003006
"developmental process involved in reproduction" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
[GO:0080127 "fruit septum development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
Length = 282
Score = 120 (47.3 bits), Expect = 0.00029, P = 0.00029
Identities = 35/130 (26%), Positives = 62/130 (47%)
Query: 64 EEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKEL 123
++ D T S + G S ++++ ++ R ++ Q +E FKE + KQ+ L
Sbjct: 107 DDLDITLDRSSSR-GTSDEEEDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLAL 165
Query: 124 SRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNC 183
+++LGL QV+ WFQN+R + K + + L+ EKL +N R + +
Sbjct: 166 AKKLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKL 225
Query: 184 GGPTAIGEMS 193
P G+MS
Sbjct: 226 S-PRLYGQMS 234
>UNIPROTKB|A6NFQ7 [details] [associations]
symbol:DPRX "Divergent paired-related homeobox"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC011487
IPI:IPI00556337 RefSeq:NP_001012746.1 UniGene:Hs.579941
ProteinModelPortal:A6NFQ7 SMR:A6NFQ7 STRING:A6NFQ7 PRIDE:A6NFQ7
Ensembl:ENST00000376650 GeneID:503834 KEGG:hsa:503834
UCSC:uc002qcf.1 CTD:503834 GeneCards:GC19P054136 HGNC:HGNC:32166
HPA:HPA043682 MIM:611165 neXtProt:NX_A6NFQ7 PharmGKB:PA142671957
eggNOG:NOG279221 HOGENOM:HOG000112264 InParanoid:A6NFQ7 OMA:IVHFGCC
OrthoDB:EOG47WNPP NextBio:112038 CleanEx:HS_DPRX
Genevestigator:A6NFQ7 Uniprot:A6NFQ7
Length = 191
Score = 115 (45.5 bits), Expect = 0.00029, P = 0.00029
Identities = 29/122 (23%), Positives = 56/122 (45%)
Query: 72 GSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
GSE+ G DQ K+ + T+ Q++++ F E P+P+ +KE++ ++ + P
Sbjct: 3 GSEDLR--KGKDQMHSHRKRTMF---TKKQLEDLNILFNENPYPNPSLQKEMASKIDIHP 57
Query: 132 LQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASC----PNCGGPT 187
++ WF+N R ++K +H + + T + + L NA PN P
Sbjct: 58 TVLQVWFKNHRAKLKKAKCKHIHQKQETPQPPIPEGGVSTSVGLRNADTLPRLPNAAHPI 117
Query: 188 AI 189
+
Sbjct: 118 GL 119
>UNIPROTKB|I3LGC8 [details] [associations]
symbol:VSX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060040 "retinal
bipolar neuron differentiation" evidence=IEA] [GO:0042551 "neuron
maturation" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104013 GO:GO:0060040 GO:GO:0042551
InterPro:IPR023339 PROSITE:PS51496 OMA:WGSDHLK EMBL:FP565328
Ensembl:ENSSSCT00000025097 Uniprot:I3LGC8
Length = 365
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 61 LREEEFDSTKSGSENHEGASGDDQEQRPN---KKKRYHR--HTQHQIQEMEAFFKECPHP 115
+R++ +S + E+ D + P +KKR HR T HQ++E+E F E +P
Sbjct: 130 IRQKRSESVSTSEEDSLPEDRSDLKLPPTPGKRKKRRHRTVFTAHQLEELEKAFSEAHYP 189
Query: 116 DDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTE 160
D R+ L+ + L +++ WFQN+R + + + +R + + E
Sbjct: 190 DVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAE 234
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 31/85 (36%), Positives = 45/85 (52%)
Query: 90 KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
KKKR T Q+ +E F+E D ++ +LSRELGL+P Q+ WFQN+R + K +
Sbjct: 77 KKKRL---TSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQ 133
Query: 150 ERHENTQLRTENEKL-RADNMRYRE 173
LR E + + R M + E
Sbjct: 134 LEQLYDSLRQEYDVVSREKQMLHDE 158
>WB|WBGene00006766 [details] [associations]
symbol:unc-30 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0040011 "locomotion" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0097154 "GABAergic
neuron differentiation" evidence=IMP] [GO:0033563 "dorsal/ventral
axon guidance" evidence=IMP] [GO:0040012 "regulation of locomotion"
evidence=IMP] [GO:0000983 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity"
evidence=IC] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0040012 GO:GO:0000983 KO:K09362 GO:GO:0033563
EMBL:Z73422 eggNOG:NOG249113 GeneTree:ENSGT00700000104438
EMBL:L37867 PIR:T18786 PIR:T43635 RefSeq:NP_001021276.1
RefSeq:NP_001021277.1 UniGene:Cel.19751 ProteinModelPortal:P52906
SMR:P52906 STRING:P52906 EnsemblMetazoa:B0564.10b GeneID:178265
KEGG:cel:CELE_B0564.10 UCSC:B0564.10a CTD:178265 WormBase:B0564.10a
WormBase:B0564.10b HOGENOM:HOG000016380 InParanoid:P52906
OMA:WISLTEP NextBio:900422 GO:GO:0097154 Uniprot:P52906
Length = 323
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 33/115 (28%), Positives = 66/115 (57%)
Query: 44 LHPLDMTQNTSESEIARL--REEEFDS---TKSGSENH-EGASGDDQEQRPNKKKRYHRH 97
L P D+T + E+ L ++E+ D+ T S +++ G++ + Q+P +++R H
Sbjct: 62 LPPTDITTKLPKLELLSLDVKQEQDDNHLDTSSPTDSTGNGSTNGGKIQKP-RRQRTH-F 119
Query: 98 TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERH 152
T HQ+ E+E +F +PD R+E++ + L +V+ WF+N+R + + + ER+
Sbjct: 120 TSHQLTELENWFSRNRYPDMACREEIAVWISLTEPRVRVWFKNRRAKWR-KRERN 173
>UNIPROTKB|F1S681 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 GO:GO:0021526
OMA:LSFRDDQ EMBL:CU855640 EMBL:FP476046 Ensembl:ENSSSCT00000016925
Uniprot:F1S681
Length = 369
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 37/132 (28%), Positives = 64/132 (48%)
Query: 74 ENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
E++E A +D + K+ R T Q++ ++ +K P P R++LS E GL+
Sbjct: 121 EDYETAKQNDDSEAGAKRPRT-TITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRV 179
Query: 134 VKFWFQNKRTQ---MKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIG 190
V+ WFQN+R + +K RH Q ++ R + + +E+ S +CG +
Sbjct: 180 VQVWFQNRRAKEKRLKKDAGRHRWGQFYKSVKRSRGSSKQEKES----SAEDCG--VSDS 233
Query: 191 EMSFDEHHLRLE 202
E+SF E + E
Sbjct: 234 ELSFREDQILSE 245
>UNIPROTKB|Q9UIW0 [details] [associations]
symbol:VAX2 "Ventral anterior homeobox 2" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0009950 "dorsal/ventral axis specification" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0030900 "forebrain development" evidence=ISS]
[GO:0007398 "ectoderm development" evidence=TAS] [GO:0007601
"visual perception" evidence=TAS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 EMBL:CH471053
GO:GO:0016055 GO:GO:0007601 GO:GO:0030900 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041 GO:GO:0007409
GO:GO:0048048 GO:GO:0000976 GO:GO:0007398 GO:GO:0031490
GO:GO:0009950 eggNOG:NOG309408 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
EMBL:Y17791 EMBL:BT007035 EMBL:BC006336 IPI:IPI00018903
RefSeq:NP_036608.1 UniGene:Hs.249170 ProteinModelPortal:Q9UIW0
SMR:Q9UIW0 STRING:Q9UIW0 PhosphoSite:Q9UIW0 DMDM:20532295
PaxDb:Q9UIW0 PRIDE:Q9UIW0 DNASU:25806 Ensembl:ENST00000234392
GeneID:25806 KEGG:hsa:25806 UCSC:uc002shh.3 GeneCards:GC02P071127
HGNC:HGNC:12661 MIM:604295 neXtProt:NX_Q9UIW0 PharmGKB:PA37284
InParanoid:Q9UIW0 OMA:LGEADHC PhylomeDB:Q9UIW0 GenomeRNAi:25806
NextBio:47023 ArrayExpress:Q9UIW0 Bgee:Q9UIW0 CleanEx:HS_VAX2
Genevestigator:Q9UIW0 GermOnline:ENSG00000116035 Uniprot:Q9UIW0
Length = 290
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 27/84 (32%), Positives = 42/84 (50%)
Query: 87 RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
RP + + T Q+ +E F+ C + ++R EL+R+L L QVK WFQN+RT+ K
Sbjct: 101 RPKRTRT--SFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQK 158
Query: 147 TQHERH-ENTQLRTENEKLRADNM 169
R E + +E N+
Sbjct: 159 KDQSRDLEKRASSSASEAFATSNI 182
WARNING: HSPs involving 124 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 763 737 0.00088 121 3 11 22 0.42 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 374
No. of states in DFA: 623 (66 KB)
Total size of DFA: 386 KB (2189 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 69.60u 0.14s 69.74t Elapsed: 00:00:03
Total cpu time: 69.63u 0.14s 69.77t Elapsed: 00:00:03
Start: Mon May 20 23:31:38 2013 End: Mon May 20 23:31:41 2013
WARNINGS ISSUED: 2