BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 004294
         (763 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|297739295|emb|CBI28946.3| unnamed protein product [Vitis vinifera]
          Length = 757

 Score = 1422 bits (3680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 687/765 (89%), Positives = 727/765 (95%), Gaps = 10/765 (1%)

Query: 1   MPTGVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIAR 60
           MP G+MIPA +MPS +GRNGNV   GSSSGL+L QP NMM+GQLHPLDMTQNTSESEIAR
Sbjct: 1   MPAGIMIPATHMPSMMGRNGNVAAYGSSSGLSLGQP-NMMDGQLHPLDMTQNTSESEIAR 59

Query: 61  LREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK 118
           LRE++FDS KSGSENHEGASGDDQ+  QRP KKKRYHRHTQHQIQEMEAFFKECPHPDDK
Sbjct: 60  LREDDFDS-KSGSENHEGASGDDQDPNQRP-KKKRYHRHTQHQIQEMEAFFKECPHPDDK 117

Query: 119 QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNA 178
           QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLR+ENEKLR +N+RYREALSNA
Sbjct: 118 QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRSENEKLRTENLRYREALSNA 177

Query: 179 SCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSR 238
           SCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPL+ P VP+R
Sbjct: 178 SCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLI-PQVPTR 236

Query: 239 PLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGE 298
           PL+L VGNFGAQPG+GG E++GA+DLLRSI+ PTEADKPMIIELAVAAMEEL RMAQMGE
Sbjct: 237 PLDLGVGNFGAQPGLGG-ELFGASDLLRSINGPTEADKPMIIELAVAAMEELFRMAQMGE 295

Query: 299 PLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVN 358
           PLW+ SLDGT   L+EDEY+R+FPRGIGPKP GFKCEASRETAVVIMNHISLVEILMDVN
Sbjct: 296 PLWLPSLDGTTTELSEDEYIRSFPRGIGPKPPGFKCEASRETAVVIMNHISLVEILMDVN 355

Query: 359 QWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHG 418
           QWSTVFSGIVSRAMTLEVLSTGVAGNYNGA QVMTAEFQVPSPLVPTRESY+VRYCKQH 
Sbjct: 356 QWSTVFSGIVSRAMTLEVLSTGVAGNYNGAFQVMTAEFQVPSPLVPTRESYFVRYCKQHA 415

Query: 419 EGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQ 478
           +GTWAVVDVSLDNLRPSP VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHN+YKQ
Sbjct: 416 DGTWAVVDVSLDNLRPSPVVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNIYKQ 475

Query: 479 LVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISF 538
           LV++G AFGAKRWVATLDRQCERLAS MATNIPTGEVGVIT+Q+GRKSMLKLAERMVISF
Sbjct: 476 LVNSGLAFGAKRWVATLDRQCERLASAMATNIPTGEVGVITSQEGRKSMLKLAERMVISF 535

Query: 539 CAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDF 598
           CAGVSASTAHTWTTLSG+GADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDF
Sbjct: 536 CAGVSASTAHTWTTLSGSGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDF 595

Query: 599 LRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESC 658
           LRDEN+RSEWDILSNGGVVQEMAHIANG+DTGNCVSLLRVN   SANSSQSNMLILQESC
Sbjct: 596 LRDENSRSEWDILSNGGVVQEMAHIANGQDTGNCVSLLRVN---SANSSQSNMLILQESC 652

Query: 659 TDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSL 718
           TD TASFVIYAPVD+VAMN+VLNGGDPDYVALLPSGFAILPDGT+ HG  IGE  SGGSL
Sbjct: 653 TDSTASFVIYAPVDVVAMNMVLNGGDPDYVALLPSGFAILPDGTTAHGGVIGEVGSGGSL 712

Query: 719 LTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
           LTVAFQILVDSVPTAKLSLGSVATVNNLIACTV+RIKA++SCE+A
Sbjct: 713 LTVAFQILVDSVPTAKLSLGSVATVNNLIACTVDRIKAAVSCENA 757


>gi|147826488|emb|CAN66212.1| hypothetical protein VITISV_013736 [Vitis vinifera]
          Length = 754

 Score = 1412 bits (3654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 682/765 (89%), Positives = 722/765 (94%), Gaps = 13/765 (1%)

Query: 1   MPTGVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIAR 60
           MP G+MIPA +MPS +GRNGNV   GSSSGL+L QP NMM+GQLHPLDMTQNTSESEIAR
Sbjct: 1   MPAGIMIPATHMPSMMGRNGNVAAYGSSSGLSLGQP-NMMDGQLHPLDMTQNTSESEIAR 59

Query: 61  LREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK 118
           LRE++FDS KSGSENHEGASGDDQ+  QRP KKKRYHRHTQHQIQEMEAFFKECPHPDDK
Sbjct: 60  LREDDFDS-KSGSENHEGASGDDQDPNQRP-KKKRYHRHTQHQIQEMEAFFKECPHPDDK 117

Query: 119 QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNA 178
           QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLR+ENEKLR +N+RYREALSNA
Sbjct: 118 QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRSENEKLRTENLRYREALSNA 177

Query: 179 SCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSR 238
           SCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYP + P VP+R
Sbjct: 178 SCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPXIPPQVPTR 237

Query: 239 PLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGE 298
           PL+L VGNFGAQPG+GG E++GA+DLLRSI+ PTEADKPMIIELAVAAMEEL RMAQMGE
Sbjct: 238 PLDLGVGNFGAQPGLGG-ELFGASDLLRSINGPTEADKPMIIELAVAAMEELFRMAQMGE 296

Query: 299 PLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVN 358
           PLW+ SLDGT   L+EDEY+R+FPRGIGPKP GFKCEASRETAVVIMNHISLVEILMDVN
Sbjct: 297 PLWLPSLDGTTTELSEDEYIRSFPRGIGPKPAGFKCEASRETAVVIMNHISLVEILMDVN 356

Query: 359 QWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHG 418
           QWSTVFSGIVSRAMTLEVLSTGVAGNYNGA QVMTAEFQVPSPLVPTRESY+VRYCKQH 
Sbjct: 357 QWSTVFSGIVSRAMTLEVLSTGVAGNYNGAFQVMTAEFQVPSPLVPTRESYFVRYCKQHA 416

Query: 419 EGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQ 478
           +GTWAVVDVSLDNLRPSP VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHN+YKQ
Sbjct: 417 DGTWAVVDVSLDNLRPSPVVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNIYKQ 476

Query: 479 LVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISF 538
           LV++G AFGAKRWVATLDRQCERLAS MATNIPT    VIT+Q+GRKSMLKLAERMVISF
Sbjct: 477 LVNSGLAFGAKRWVATLDRQCERLASAMATNIPT----VITSQEGRKSMLKLAERMVISF 532

Query: 539 CAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDF 598
           CAGVSASTAHTWTTLSG+GADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDF
Sbjct: 533 CAGVSASTAHTWTTLSGSGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDF 592

Query: 599 LRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESC 658
           LRDEN+RSEWDILSNGGVVQEMAHIANG+DTGNCVSLLRVN   SANSSQSNMLILQESC
Sbjct: 593 LRDENSRSEWDILSNGGVVQEMAHIANGQDTGNCVSLLRVN---SANSSQSNMLILQESC 649

Query: 659 TDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSL 718
           TD TASFVIYAPVD+VAMN+VLNGGDPDYVALLPSGFAILPDGT+ HG  IGE  SGGSL
Sbjct: 650 TDSTASFVIYAPVDVVAMNMVLNGGDPDYVALLPSGFAILPDGTTAHGGVIGEVGSGGSL 709

Query: 719 LTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
           LTVAFQILVDSVPTAKLSLGSVATVNNLIACTV+RIKA++SCE+A
Sbjct: 710 LTVAFQILVDSVPTAKLSLGSVATVNNLIACTVDRIKAAVSCENA 754


>gi|359485664|ref|XP_002273837.2| PREDICTED: homeobox-leucine zipper protein HDG2 [Vitis vinifera]
          Length = 762

 Score = 1402 bits (3630), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 681/771 (88%), Positives = 720/771 (93%), Gaps = 22/771 (2%)

Query: 6   MIPARNMPSTIGRNGNVGGLGSSSGLTLSQ-----------PTNMMEGQLHPLDMTQNTS 54
           MIPA +MPS +GRNGNV   GSSSGL+L Q             NMM+GQLHPLDMTQNTS
Sbjct: 1   MIPATHMPSMMGRNGNVAAYGSSSGLSLGQVRTQLLSCYMFQPNMMDGQLHPLDMTQNTS 60

Query: 55  ESEIARLREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKEC 112
           ESEIARLRE++FDS KSGSENHEGASGDDQ+  QRP KKKRYHRHTQHQIQEMEAFFKEC
Sbjct: 61  ESEIARLREDDFDS-KSGSENHEGASGDDQDPNQRP-KKKRYHRHTQHQIQEMEAFFKEC 118

Query: 113 PHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYR 172
           PHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLR+ENEKLR +N+RYR
Sbjct: 119 PHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRSENEKLRTENLRYR 178

Query: 173 EALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLS 232
           EALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPL+ 
Sbjct: 179 EALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLI- 237

Query: 233 PPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIR 292
           P VP+RPL+L VGNFGAQPG+GG E++GA+DLLRSI+ PTEADKPMIIELAVAAMEEL R
Sbjct: 238 PQVPTRPLDLGVGNFGAQPGLGG-ELFGASDLLRSINGPTEADKPMIIELAVAAMEELFR 296

Query: 293 MAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVE 352
           MAQMGEPLW+ SLDGT   L+EDEY+R+FPRGIGPKP GFKCEASRETAVVIMNHISLVE
Sbjct: 297 MAQMGEPLWLPSLDGTTTELSEDEYIRSFPRGIGPKPPGFKCEASRETAVVIMNHISLVE 356

Query: 353 ILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVR 412
           ILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGA QVMTAEFQVPSPLVPTRESY+VR
Sbjct: 357 ILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGAFQVMTAEFQVPSPLVPTRESYFVR 416

Query: 413 YCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV 472
           YCKQH +GTWAVVDVSLDNLRPSP VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV
Sbjct: 417 YCKQHADGTWAVVDVSLDNLRPSPVVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV 476

Query: 473 HNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAE 532
           HN+YKQLV++G AFGAKRWVATLDRQCERLAS MATNIPTGEVGVIT+Q+GRKSMLKLAE
Sbjct: 477 HNIYKQLVNSGLAFGAKRWVATLDRQCERLASAMATNIPTGEVGVITSQEGRKSMLKLAE 536

Query: 533 RMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPP 592
           RMVISFCAGVSASTAHTWTTLSG+GADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPP
Sbjct: 537 RMVISFCAGVSASTAHTWTTLSGSGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPP 596

Query: 593 KRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNML 652
           KRVFDFLRDEN+RSEWDILSNGGVVQEMAHIANG+DTGNCVSLLR     SANSSQSNML
Sbjct: 597 KRVFDFLRDENSRSEWDILSNGGVVQEMAHIANGQDTGNCVSLLR-----SANSSQSNML 651

Query: 653 ILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEA 712
           ILQESCTD TASFVIYAPVD+VAMN+VLNGGDPDYVALLPSGFAILPDGT+ HG  IGE 
Sbjct: 652 ILQESCTDSTASFVIYAPVDVVAMNMVLNGGDPDYVALLPSGFAILPDGTTAHGGVIGEV 711

Query: 713 ASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
            SGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTV+RIKA++SCE+A
Sbjct: 712 GSGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVDRIKAAVSCENA 762


>gi|255566373|ref|XP_002524172.1| homeobox protein, putative [Ricinus communis]
 gi|223536541|gb|EEF38187.1| homeobox protein, putative [Ricinus communis]
          Length = 731

 Score = 1398 bits (3619), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 671/735 (91%), Positives = 704/735 (95%), Gaps = 8/735 (1%)

Query: 33  LSQPTNMMEGQLHPLDMTQNTSESEIARLREEEFDST--KSGSENHEGASGDDQEQRPNK 90
           + QP  +MEGQLH LDMTQNTSES++AR+R+EEFDST  KSGS+NHEGASGDDQ+ RPNK
Sbjct: 1   MFQPNMLMEGQLHHLDMTQNTSESDLARIRDEEFDSTNTKSGSDNHEGASGDDQDPRPNK 60

Query: 91  KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE
Sbjct: 61  KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 120

Query: 151 RHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEI 210
           RHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEI
Sbjct: 121 RHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEI 180

Query: 211 DRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISA 270
           DRISAIAAKYVGKPVVNYPLLS P+P RPLEL VGNFGAQPGIGG EMYGA DLLRSISA
Sbjct: 181 DRISAIAAKYVGKPVVNYPLLSAPMPPRPLELGVGNFGAQPGIGG-EMYGAGDLLRSISA 239

Query: 271 PTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPT 330
           P+EADKPMIIELAVAAMEEL+RMAQMGEPLWM+S DGT + LNEDEY+R FPRGIGPKP 
Sbjct: 240 PSEADKPMIIELAVAAMEELLRMAQMGEPLWMSSHDGTNSALNEDEYIRIFPRGIGPKPA 299

Query: 331 GFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ 390
           GFKCEASRETA+VIMNHI+LVE LMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ
Sbjct: 300 GFKCEASRETALVIMNHINLVEYLMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ 359

Query: 391 VMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQ 450
           VMTAEFQ+P+PLVPTRESY+VRYCKQH EGTWAVVDVSLDNLRPSPA RCRRRPSGCLIQ
Sbjct: 360 VMTAEFQLPTPLVPTRESYFVRYCKQHAEGTWAVVDVSLDNLRPSPAARCRRRPSGCLIQ 419

Query: 451 EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI 510
           EMPNGYS+VTW+EHVEVDDRGVH+LYKQLVS+G+AFGAKRWVATLDRQCERLAS MATNI
Sbjct: 420 EMPNGYSQVTWIEHVEVDDRGVHSLYKQLVSSGHAFGAKRWVATLDRQCERLASAMATNI 479

Query: 511 PTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 570
           PTGEVGVITNQ+GRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD
Sbjct: 480 PTGEVGVITNQEGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 539

Query: 571 DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTG 630
           DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDEN+R++WDILSNGGVVQEMAHIANGRDTG
Sbjct: 540 DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRNQWDILSNGGVVQEMAHIANGRDTG 599

Query: 631 NCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVAL 690
           NCVSLLRVN   SANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVAL
Sbjct: 600 NCVSLLRVN---SANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVAL 656

Query: 691 LPSGFAILPDGTSLHGANIG--EAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIA 748
           LPSGFAILPDGT+ HG  IG    ++GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIA
Sbjct: 657 LPSGFAILPDGTTAHGGGIGGESVSAGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIA 716

Query: 749 CTVERIKASLSCESA 763
           CTVERIKA+LSCE+A
Sbjct: 717 CTVERIKAALSCENA 731


>gi|224069018|ref|XP_002302880.1| predicted protein [Populus trichocarpa]
 gi|222844606|gb|EEE82153.1| predicted protein [Populus trichocarpa]
          Length = 756

 Score = 1376 bits (3561), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 677/762 (88%), Positives = 712/762 (93%), Gaps = 10/762 (1%)

Query: 6   MIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEG-QLHPLDMTQNTSESEIARLREE 64
           MIPARNMPS IG NGNVGG GSSSGL L QP NMMEG + H LDMT NTSE ++ R+R+E
Sbjct: 1   MIPARNMPSMIGVNGNVGGFGSSSGLALGQP-NMMEGHEFHHLDMTHNTSEGDMTRIRDE 59

Query: 65  EFDST--KSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE 122
           EFDST  KSGSEN EGASGDDQ+ RP KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE
Sbjct: 60  EFDSTNTKSGSENQEGASGDDQDPRP-KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE 118

Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPN 182
           LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLR ENEKLRADNMRYREALSNASCPN
Sbjct: 119 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRNENEKLRADNMRYREALSNASCPN 178

Query: 183 CGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLEL 242
           CGGPTAIGEMSFDEHHLRLEN RLREEIDRISAIAA+YVGKPVVNYP+LSPP+P RP++L
Sbjct: 179 CGGPTAIGEMSFDEHHLRLENTRLREEIDRISAIAARYVGKPVVNYPVLSPPMPPRPVDL 238

Query: 243 AVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWM 302
            VGNFG QPG+GG ++Y A DLLRSISAPTEADKPMIIELAVAAMEELIRMAQM EPLWM
Sbjct: 239 GVGNFGGQPGLGG-DIYEAGDLLRSISAPTEADKPMIIELAVAAMEELIRMAQMDEPLWM 297

Query: 303 TSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWST 362
            SLDG  AVLNEDEY+R FP GIGPKPTGFKCEASRE+AVVIMNHI+LVE LMDVNQWST
Sbjct: 298 NSLDGIDAVLNEDEYIRIFPHGIGPKPTGFKCEASRESAVVIMNHINLVEYLMDVNQWST 357

Query: 363 VFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTW 422
           +FSGIVSRA+TLEVLSTGVAGNYNGALQVMTAEFQ+P+PLVPTRESYYVRYCKQH +GTW
Sbjct: 358 LFSGIVSRALTLEVLSTGVAGNYNGALQVMTAEFQLPTPLVPTRESYYVRYCKQHADGTW 417

Query: 423 AVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVST 482
           AVVDVSLD++RP PA RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYK LVS+
Sbjct: 418 AVVDVSLDSIRPGPAARCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKHLVSS 477

Query: 483 GNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGV 542
           G+AFGAKRWVATL+RQCERLAS MATNIP G+ GVITNQ+GRKSM+KLAERMVISFCAGV
Sbjct: 478 GHAFGAKRWVATLNRQCERLASAMATNIPAGDAGVITNQEGRKSMMKLAERMVISFCAGV 537

Query: 543 SASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDE 602
           SASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDE
Sbjct: 538 SASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDE 597

Query: 603 NTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPT 662
           NTR+EWDILSNGGVVQEMAHIANGRDTGNCVSL+RVN   SANSSQSNMLILQESCTD T
Sbjct: 598 NTRNEWDILSNGGVVQEMAHIANGRDTGNCVSLIRVN---SANSSQSNMLILQESCTDQT 654

Query: 663 ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAAS-GGSLLTV 721
           ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAI PDGT+ HG  + E+ S GGSLLTV
Sbjct: 655 ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIFPDGTAAHGVGMDESGSTGGSLLTV 714

Query: 722 AFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
           AFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA
Sbjct: 715 AFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 756


>gi|449468346|ref|XP_004151882.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Cucumis
           sativus]
          Length = 764

 Score = 1369 bits (3544), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 674/774 (87%), Positives = 714/774 (92%), Gaps = 21/774 (2%)

Query: 1   MPTGVMIPARNMPSTIGRNGN--VGGLGSSSGLTLSQ------PTNMMEGQLHPLDMTQN 52
           MP G+M PARNM S IGRNGN  V G  S SGL  SQ        ++M+  L PLD+ QN
Sbjct: 1   MPAGIMTPARNMGSMIGRNGNNDVAGFSSPSGLPFSQICRKMFQPSIMDAHLLPLDIPQN 60

Query: 53  TSESEIARLREEEFDS-TKSGSEN-HEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFK 110
           TSES++AR+R+++FDS TKSGS+N HE  SGDDQ+ RP KKKRYHRHTQHQIQEMEAFFK
Sbjct: 61  TSESDLARIRDDDFDSATKSGSDNNHELVSGDDQDPRP-KKKRYHRHTQHQIQEMEAFFK 119

Query: 111 ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMR 170
           ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK QHERHENTQLRTENEKLRADNMR
Sbjct: 120 ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENTQLRTENEKLRADNMR 179

Query: 171 YREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPL 230
           YREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPL
Sbjct: 180 YREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPL 239

Query: 231 LSPPVPSRPLELAVGNFGAQPGIGGGEMYGAA-DLLRSISAPTEADKPMIIELAVAAMEE 289
           LSP VPSRPLEL + NFG QPG+GGG++YG+A DL+RSISAPTEADKPMIIELAVAAMEE
Sbjct: 240 LSPSVPSRPLELGMANFGPQPGLGGGDIYGSASDLIRSISAPTEADKPMIIELAVAAMEE 299

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHIS 349
           L RMAQMGEPLWMT+LDG+  +LNEDEY+RTFPRGIGPKP+GFKCEASRE+AVVIMNHI+
Sbjct: 300 LTRMAQMGEPLWMTTLDGSTHMLNEDEYLRTFPRGIGPKPSGFKCEASRESAVVIMNHIN 359

Query: 350 LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESY 409
           LVEILMDVNQWST+FSGIVSRAMTLEVLSTGVAGNYNGALQVMT+EFQVPSPLVPTRESY
Sbjct: 360 LVEILMDVNQWSTLFSGIVSRAMTLEVLSTGVAGNYNGALQVMTSEFQVPSPLVPTRESY 419

Query: 410 YVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 469
           YVRYCKQHG+GTW VVDVSLD+LRP+P VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD
Sbjct: 420 YVRYCKQHGDGTWVVVDVSLDDLRPTPGVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 479

Query: 470 RGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK 529
           RGVHNLYKQLVS+G AFGAKRWV TLDRQCERLAS MATNIPTG+VGVITNQ+GRKSMLK
Sbjct: 480 RGVHNLYKQLVSSGQAFGAKRWVTTLDRQCERLASAMATNIPTGDVGVITNQEGRKSMLK 539

Query: 530 LAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP 589
           LAERMVISFCAGVSAST HTWTTLSGTGADDVRVMTRKS+DDPGRP GIVLSAATSFWLP
Sbjct: 540 LAERMVISFCAGVSASTTHTWTTLSGTGADDVRVMTRKSIDDPGRPHGIVLSAATSFWLP 599

Query: 590 VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQS 649
           VPPKR+FDFLRDEN+RSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVN   SANSSQS
Sbjct: 600 VPPKRIFDFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVN---SANSSQS 656

Query: 650 NMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANI 709
           NMLILQESCTDPTASFVIYAPVD+VAMN+VLNGGDPDYVALLPSGFAILPDG        
Sbjct: 657 NMLILQESCTDPTASFVIYAPVDVVAMNLVLNGGDPDYVALLPSGFAILPDGGGG----- 711

Query: 710 GEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
            E  SGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCE+A
Sbjct: 712 -EGVSGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCENA 764


>gi|224128938|ref|XP_002320458.1| predicted protein [Populus trichocarpa]
 gi|222861231|gb|EEE98773.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score = 1363 bits (3528), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 661/733 (90%), Positives = 693/733 (94%), Gaps = 9/733 (1%)

Query: 33  LSQPTNMMEGQLHPLDMTQNTSESEIARLREEEFDST--KSGSENHEGASGDDQEQRPNK 90
           + QP NMMEGQLH LDMTQNT E ++AR+R++EFDST  KSGSEN +GASGDDQ+ RP K
Sbjct: 1   MFQP-NMMEGQLHRLDMTQNTPEGDMARIRDDEFDSTNTKSGSENQDGASGDDQDPRP-K 58

Query: 91  KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE
Sbjct: 59  KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 118

Query: 151 RHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEI 210
           RHENTQLR ENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEI
Sbjct: 119 RHENTQLRNENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEI 178

Query: 211 DRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISA 270
           DRISAIAAKYVGKPVVNYPL+S P+P RPL+L VGNFG QPGIGG E+YGA DLLRSI+A
Sbjct: 179 DRISAIAAKYVGKPVVNYPLISAPMPPRPLDLGVGNFGGQPGIGG-EIYGAGDLLRSITA 237

Query: 271 PTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPT 330
           PTEADKPMIIELAVAAMEEL+RMAQM EPLWM SLDGT AVL+EDEYVR FPRGIGPKPT
Sbjct: 238 PTEADKPMIIELAVAAMEELVRMAQMDEPLWMGSLDGTNAVLDEDEYVRIFPRGIGPKPT 297

Query: 331 GFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ 390
           GFKCEASRE+AVVIMNHI+LVE LMDVNQWST+FSGIVSRA+TLEVLSTGVAGNYNGALQ
Sbjct: 298 GFKCEASRESAVVIMNHINLVEYLMDVNQWSTLFSGIVSRALTLEVLSTGVAGNYNGALQ 357

Query: 391 VMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQ 450
           VMTAEFQ+P+PLVPTRESY+VRYCKQH +GTWAVVDVSLDNLRPSP  RCRRRPSGCLIQ
Sbjct: 358 VMTAEFQLPTPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPGARCRRRPSGCLIQ 417

Query: 451 EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI 510
           EM NGYSKVTWVEHVEVDDRGVHNLYKQLVS+G+AFGAKRWVATLDRQCERLAS MATNI
Sbjct: 418 EMLNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCERLASAMATNI 477

Query: 511 PTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 570
           P G+VGVITNQ+GRKSM+KLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD
Sbjct: 478 PAGDVGVITNQEGRKSMMKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 537

Query: 571 DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTG 630
           DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDE+TR+EWDILSNGGVVQEMAHIANGRDTG
Sbjct: 538 DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDESTRNEWDILSNGGVVQEMAHIANGRDTG 597

Query: 631 NCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVAL 690
           NCVSLLRVN   SANSSQSNMLILQESC D TASFVIYAPVDIVAMNVVLNGGDPDYVAL
Sbjct: 598 NCVSLLRVN---SANSSQSNMLILQESCADQTASFVIYAPVDIVAMNVVLNGGDPDYVAL 654

Query: 691 LPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACT 750
           LPSGFA+LPDGT  H   + EAA GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACT
Sbjct: 655 LPSGFAVLPDGTGAHVGGMEEAA-GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACT 713

Query: 751 VERIKASLSCESA 763
           VERIKASLSCESA
Sbjct: 714 VERIKASLSCESA 726


>gi|356550018|ref|XP_003543387.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 781

 Score = 1346 bits (3484), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 672/785 (85%), Positives = 705/785 (89%), Gaps = 26/785 (3%)

Query: 1   MPTGVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQ-----------------PTNMMEGQ 43
           MP G+MIPARNMPS IGRNG VGG G SSGL+L Q                 P  M  GQ
Sbjct: 1   MPAGIMIPARNMPSMIGRNGTVGGFGLSSGLSLGQIENHKASESQRSEEMFQPNLMEAGQ 60

Query: 44  LHPLDMTQNTSESEIARLREEEFDS-TKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQI 102
           LHPLDM QNTSES++ R+RE++FDS TKSGSEN EGASG+DQ+ RPNKKKRYHRHTQHQI
Sbjct: 61  LHPLDMPQNTSESDVPRIREDDFDSATKSGSENLEGASGEDQDPRPNKKKRYHRHTQHQI 120

Query: 103 QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENE 162
           QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENE
Sbjct: 121 QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENE 180

Query: 163 KLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVG 222
           KLRADNMR+REAL NASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVG
Sbjct: 181 KLRADNMRFREALGNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVG 240

Query: 223 KPVVNYPLLSPP-VPSRPLELAVGNFGAQPGIGGGEMY---GAADLLRSISAPTEADKPM 278
           KPVV+YPL+SP  +P RPLEL +G        G G       A DLLRSIS PTEADKP+
Sbjct: 241 KPVVSYPLVSPSSIPPRPLELGIGGGFGGQPGGTGGDMYGGAAGDLLRSISGPTEADKPI 300

Query: 279 IIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASR 338
           IIELAVAAMEELI MAQMGEPLW+T+LDGT  VLNEDEY+R+FPRGIGPKP GFK EASR
Sbjct: 301 IIELAVAAMEELIGMAQMGEPLWLTTLDGTT-VLNEDEYIRSFPRGIGPKPAGFKFEASR 359

Query: 339 ETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQV 398
           ETAVVIMNH++LVEILMDVNQWSTVF+GIVSRAMTLEVLSTGVAGNYNGALQVMTAE QV
Sbjct: 360 ETAVVIMNHVNLVEILMDVNQWSTVFAGIVSRAMTLEVLSTGVAGNYNGALQVMTAEVQV 419

Query: 399 PSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSK 458
           PSPLVPTRESY+VRYCKQHG+GTWAVVDVSLDNLRPSP+ RCRRRPSGCLIQEMPNGYSK
Sbjct: 420 PSPLVPTRESYFVRYCKQHGDGTWAVVDVSLDNLRPSPSARCRRRPSGCLIQEMPNGYSK 479

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           V WVEHVEVDDRGVHNLYKQLVS+G+AFGAKRWVATLDRQCERLAS MATNIPT +VGVI
Sbjct: 480 VIWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCERLASAMATNIPTVDVGVI 539

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI
Sbjct: 540 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 599

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRV 638
           VLSAATSFWLPV PKRVF+FLRDEN+RSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRV
Sbjct: 600 VLSAATSFWLPVSPKRVFEFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRV 659

Query: 639 NCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL 698
           N   SANSSQSNMLILQESC D T SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL
Sbjct: 660 N---SANSSQSNMLILQESCADSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL 716

Query: 699 PDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           PDGT+ HG  IG+   GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKA+L
Sbjct: 717 PDGTTAHGGGIGDTGHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKAAL 776

Query: 759 SCESA 763
           S E A
Sbjct: 777 SGEVA 781


>gi|356542838|ref|XP_003539872.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 727

 Score = 1316 bits (3407), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 646/735 (87%), Positives = 682/735 (92%), Gaps = 12/735 (1%)

Query: 33  LSQPTNMMEGQLHPLDMTQNTSESEIARLREEEFDS-TKSGSENHEGASGDDQEQRPNKK 91
           + QP N+M+     L+M QNTSESE+ R+ E+EFDS TKSGSENHEGASG+DQ+ RPNKK
Sbjct: 1   MFQP-NLMDA----LEMGQNTSESEVPRILEDEFDSATKSGSENHEGASGEDQDPRPNKK 55

Query: 92  KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
           KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER
Sbjct: 56  KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 115

Query: 152 HENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEID 211
           HENT LRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEID
Sbjct: 116 HENTNLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEID 175

Query: 212 RISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIG-GGEMYGAADLLRSISA 270
           RISAIAAKYVGKPVVNY  +SP +P RPLEL VG  G     G G +MYGA DLLRSIS 
Sbjct: 176 RISAIAAKYVGKPVVNYSNISPSLPPRPLELGVGGAGFGGQPGIGVDMYGAGDLLRSISG 235

Query: 271 PTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPT 330
           PTEADKP+IIELAVAAMEELI MAQMGEPLW+T+LDGT+ +LNEDEY+R+FPRGIGPKP+
Sbjct: 236 PTEADKPIIIELAVAAMEELIGMAQMGEPLWLTTLDGTSTMLNEDEYIRSFPRGIGPKPS 295

Query: 331 GFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ 390
           GFKCEASRETAVVIMNH++LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ
Sbjct: 296 GFKCEASRETAVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ 355

Query: 391 VMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQ 450
           VMTAE Q+P+PLVPTRESY+VRYCKQH +GTWAVVDVSLDNLRP P+ RCRRRPSGCLIQ
Sbjct: 356 VMTAELQLPTPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPGPSARCRRRPSGCLIQ 415

Query: 451 EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI 510
           EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVS+G+AFGAKRWVATLDRQCERLAS MATNI
Sbjct: 416 EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCERLASAMATNI 475

Query: 511 PTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 570
           PT +VGVITNQDGRKSM+KLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD
Sbjct: 476 PTVDVGVITNQDGRKSMMKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 535

Query: 571 DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTG 630
           DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDEN+R+EWDILSNGGVVQEMAHIANGRDTG
Sbjct: 536 DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRNEWDILSNGGVVQEMAHIANGRDTG 595

Query: 631 NCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVAL 690
           NCVSLLRVN   SANSSQSNMLILQESCT+ T SFVIYAPVDIVAMNVVLNGGDPDYVAL
Sbjct: 596 NCVSLLRVN---SANSSQSNMLILQESCTNSTGSFVIYAPVDIVAMNVVLNGGDPDYVAL 652

Query: 691 LPSGFAILPDGTSLHGAN--IGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIA 748
           LPSGFAILPDGT+ H  +  IGE    GSLLTVAFQILVDSVPTAKLSLGSVATVNNLIA
Sbjct: 653 LPSGFAILPDGTTSHNGSGGIGETGPSGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIA 712

Query: 749 CTVERIKASLSCESA 763
           CTVERIKASLS E A
Sbjct: 713 CTVERIKASLSGEPA 727


>gi|356517624|ref|XP_003527487.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 729

 Score = 1305 bits (3378), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 649/737 (88%), Positives = 686/737 (93%), Gaps = 14/737 (1%)

Query: 33  LSQPTNMMEGQLHPLDMTQNTSESEIARLREEEFDS-TKSGSENHEGASGDDQEQRPNKK 91
           + QP N+M+     L+M QNT ESEI R+RE+EFDS TKSGSENHEGASG+DQ+ RPNKK
Sbjct: 1   MFQP-NLMDA----LEMGQNTPESEIPRIREDEFDSATKSGSENHEGASGEDQDPRPNKK 55

Query: 92  KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
           KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER
Sbjct: 56  KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 115

Query: 152 HENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEID 211
           HENT LRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEID
Sbjct: 116 HENTNLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEID 175

Query: 212 RISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIG-GGEMYGAADLLRSISA 270
           RISAIAAKYVGKPVVNY  +SP +P RPLE+ VG  G     G G +MYGA DLLRSIS 
Sbjct: 176 RISAIAAKYVGKPVVNYSNISPSLPPRPLEIGVGGAGFGGQPGIGVDMYGAGDLLRSISG 235

Query: 271 PTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPT 330
           PTEADKP+IIELAVAAMEELI MAQMGEPLW+T+LDGT+ +LNEDEY+R+FPRGIGPKP+
Sbjct: 236 PTEADKPIIIELAVAAMEELIGMAQMGEPLWLTTLDGTSTMLNEDEYIRSFPRGIGPKPS 295

Query: 331 GFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ 390
           GFKCEASRETAVVIMNH++LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ
Sbjct: 296 GFKCEASRETAVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ 355

Query: 391 VMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQ 450
           VMTAE Q+P+PLVPTRESY+VRYCKQHG+GTWAVVDVSLDNLRPSP+ RCRRRPSGCLIQ
Sbjct: 356 VMTAELQLPTPLVPTRESYFVRYCKQHGDGTWAVVDVSLDNLRPSPSARCRRRPSGCLIQ 415

Query: 451 EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI 510
           EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVS+G+AFGAKR VATLDRQCERLAS MATNI
Sbjct: 416 EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRLVATLDRQCERLASAMATNI 475

Query: 511 PTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 570
           PT +VGVITNQ+GRKSM+KLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD
Sbjct: 476 PTVDVGVITNQEGRKSMMKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 535

Query: 571 DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTG 630
           DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDEN+R+EWDILSNGGVVQEMAHIANGRDTG
Sbjct: 536 DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRNEWDILSNGGVVQEMAHIANGRDTG 595

Query: 631 NCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVAL 690
           NCVSLLRVN   SANSSQSNMLILQESCTD T SFVIYAPVDIVAMNVVLNGGDPDYVAL
Sbjct: 596 NCVSLLRVN---SANSSQSNMLILQESCTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVAL 652

Query: 691 LPSGFAILPDGTSLHGAN---IGEAA-SGGSLLTVAFQILVDSVPTAKLSLGSVATVNNL 746
           LPSGFAILPDGT+ HG+    IGE + S GSLLTVAFQILVDSVPTAKLSLGSVATVNNL
Sbjct: 653 LPSGFAILPDGTTSHGSGGGVIGETSPSSGSLLTVAFQILVDSVPTAKLSLGSVATVNNL 712

Query: 747 IACTVERIKASLSCESA 763
           IACTVERIKASLS E A
Sbjct: 713 IACTVERIKASLSGEPA 729


>gi|356543720|ref|XP_003540308.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 732

 Score = 1301 bits (3367), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 646/736 (87%), Positives = 676/736 (91%), Gaps = 9/736 (1%)

Query: 33  LSQPTNMMEGQLHPLDMTQNTSESEIARLREEEFDS-TKSGSENHEGASGDDQEQRPNKK 91
           + QP  M  GQLHPLDM QNTSES++ R+RE++FDS TKSGSEN EGASG+DQ+ RPNKK
Sbjct: 1   MFQPNLMEAGQLHPLDMPQNTSESDVPRIREDDFDSATKSGSENLEGASGEDQDPRPNKK 60

Query: 92  KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
           KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER
Sbjct: 61  KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 120

Query: 152 HENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEID 211
           HENTQLRTENEKLRADNMR+REAL NASCPNCGGPTAIGEMSFDEHHLRLENARLREEID
Sbjct: 121 HENTQLRTENEKLRADNMRFREALGNASCPNCGGPTAIGEMSFDEHHLRLENARLREEID 180

Query: 212 RISAIAAKYVGKPVVNYPLLSPP-VPSRPLELAVGNFGAQPGIGGGEMY---GAADLLRS 267
           RISAIAAKYVGKPVV+YPL+SP  VP RPLEL V         G G       A DLLRS
Sbjct: 181 RISAIAAKYVGKPVVSYPLVSPSSVPPRPLELGVSGGFGGQPGGIGGDMYGGAAGDLLRS 240

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
           IS PTEADKP+IIELAVAAMEELI MAQMGEPLW+T+LDGT  VLNEDEY+R+FPRGIGP
Sbjct: 241 ISGPTEADKPIIIELAVAAMEELIGMAQMGEPLWLTTLDGTT-VLNEDEYIRSFPRGIGP 299

Query: 328 KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNG 387
           KP GFKCEASRETAVVIMNH++LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNG
Sbjct: 300 KPVGFKCEASRETAVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNG 359

Query: 388 ALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGC 447
           ALQVMTAE QVPSPLVPTRESY+VRYCKQHG+GTWAVVDVSLDNLRPSP+ RCRRRPSGC
Sbjct: 360 ALQVMTAEVQVPSPLVPTRESYFVRYCKQHGDGTWAVVDVSLDNLRPSPSARCRRRPSGC 419

Query: 448 LIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMA 507
           LIQEMPNGYSKV WVEHVEVDDRGVHNLYKQLVS+G+AFGAKRW+A LDRQCERLAS MA
Sbjct: 420 LIQEMPNGYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWIANLDRQCERLASAMA 479

Query: 508 TNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRK 567
           TNIPT +VGVITN DGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRK
Sbjct: 480 TNIPTVDVGVITNPDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRK 539

Query: 568 SVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGR 627
           SVDDPGRPPGIVLSAATSFWLPV PKRVF+FLRDEN+RSEWDILSNGGVVQEMAHIANGR
Sbjct: 540 SVDDPGRPPGIVLSAATSFWLPVSPKRVFEFLRDENSRSEWDILSNGGVVQEMAHIANGR 599

Query: 628 DTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDY 687
           DTGNCVSLLRVN   SANSSQSNMLILQESC D T SFVIYAPVDIVAMNVVLNGGDPDY
Sbjct: 600 DTGNCVSLLRVN---SANSSQSNMLILQESCADSTGSFVIYAPVDIVAMNVVLNGGDPDY 656

Query: 688 VALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLI 747
           VALLPSGFAILPDGT+ HG  IG+   GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLI
Sbjct: 657 VALLPSGFAILPDGTTAHGGGIGDIGHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLI 716

Query: 748 ACTVERIKASLSCESA 763
           ACTVERIKA+LS E A
Sbjct: 717 ACTVERIKAALSGEVA 732


>gi|449453486|ref|XP_004144488.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Cucumis
           sativus]
          Length = 761

 Score = 1301 bits (3366), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/774 (83%), Positives = 693/774 (89%), Gaps = 26/774 (3%)

Query: 1   MPTGVMIPARNMPST-IGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIA 59
           MP G+MIPARN  S+ IGRNGNVG  GS + L L Q       +L  ++M +N    E  
Sbjct: 1   MPAGMMIPARNTASSMIGRNGNVGIFGSPASLVLGQ-------ELQGIEMGEN----EYG 49

Query: 60  RLRE-EEFDS-TKSGSENHEGASGDDQ--EQRPNKKKRYHRHTQHQIQEMEAFFKECPHP 115
           R+RE EEF+S TKS SENHE  SGDDQ   QRPNKKKRYHRHTQHQIQ+MEAFFKECPHP
Sbjct: 50  RMRETEEFESGTKSSSENHEVGSGDDQLNNQRPNKKKRYHRHTQHQIQQMEAFFKECPHP 109

Query: 116 DDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREAL 175
           DDKQRKELSREL LEPLQVKFWFQNKRTQMKT HERHENTQLRTENEKLRADNMRYREAL
Sbjct: 110 DDKQRKELSRELNLEPLQVKFWFQNKRTQMKTHHERHENTQLRTENEKLRADNMRYREAL 169

Query: 176 SNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPV 235
           SNA+CPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPV NYPLLS P+
Sbjct: 170 SNATCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVSNYPLLSTPI 229

Query: 236 PSRPLELAVGNFGAQPGIGGGE---MYGAADLLRSISAPTEADKPMIIELAVAAMEELIR 292
           PSRPLEL +G++G      G     M+GAADLLR+ISAP+EADKP+IIELAVAAMEEL+R
Sbjct: 230 PSRPLELGMGSYGGHDLGLGPGGGDMFGAADLLRTISAPSEADKPVIIELAVAAMEELVR 289

Query: 293 MAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVE 352
           MAQMGEPLWMT +DG+   LNE+EYVR+FPRGIGPKP+GF CEASR TAVVIMNHISLVE
Sbjct: 290 MAQMGEPLWMTGVDGSTNELNEEEYVRSFPRGIGPKPSGFSCEASRATAVVIMNHISLVE 349

Query: 353 ILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVR 412
           +LMDVNQWST F+GIVSRAMTLEVLSTGVAGNYNGALQVMT+E QVPSPLVPTRESY+VR
Sbjct: 350 MLMDVNQWSTTFTGIVSRAMTLEVLSTGVAGNYNGALQVMTSELQVPSPLVPTRESYFVR 409

Query: 413 YCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV 472
           YCKQHGEGTWAVVDVSLD LRP+PA+RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV
Sbjct: 410 YCKQHGEGTWAVVDVSLDTLRPAPALRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV 469

Query: 473 HNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATN-IPTGEVGVITNQDGRKSMLKLA 531
           H+LY QLVS+G+AFGAKRW+ATLDRQCERLAS MAT+ IP G+ GVITNQ+GRKSMLKLA
Sbjct: 470 HSLYNQLVSSGHAFGAKRWIATLDRQCERLASAMATSIIPNGDAGVITNQEGRKSMLKLA 529

Query: 532 ERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVP 591
           ERMV+SFC GVSAST HTWTTLSGTGADDVRVMTRKSVDDPGRP GIVLSAATSFWLP+P
Sbjct: 530 ERMVMSFCGGVSASTTHTWTTLSGTGADDVRVMTRKSVDDPGRPSGIVLSAATSFWLPLP 589

Query: 592 PKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNM 651
           P RVF FLRDEN+R+EWDILSNGGVVQEMAHIANGRDTGNCVSLLRVN   SANSSQSNM
Sbjct: 590 PNRVFHFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVN---SANSSQSNM 646

Query: 652 LILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGT--SLHGAN- 708
           LILQES TD TASFVIYAPVDIV++NVVLNGGDPDYVALLPSGFAILPDG+  S  GAN 
Sbjct: 647 LILQESSTDQTASFVIYAPVDIVSINVVLNGGDPDYVALLPSGFAILPDGSTASSGGANG 706

Query: 709 IGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           +GE  SGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSC++
Sbjct: 707 VGEHGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCDN 760


>gi|449515643|ref|XP_004164858.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           HDG2-like [Cucumis sativus]
          Length = 760

 Score = 1296 bits (3354), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/773 (83%), Positives = 690/773 (89%), Gaps = 25/773 (3%)

Query: 1   MPTGVMIPARNMPST-IGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIA 59
           MP G+MIPARN  S+ IGRNGNVG  GS + L L Q       +L  ++M +N    E  
Sbjct: 1   MPAGMMIPARNTASSMIGRNGNVGIFGSPASLVLGQ-------ELQGIEMGEN----EYG 49

Query: 60  RLRE-EEFDS-TKSGSENHEGASGDDQ--EQRPNKKKRYHRHTQHQIQEMEAFFKECPHP 115
           R+RE EEF+S TKS SENHE  SGDDQ   QRPNKKKRYHRHTQHQIQ+MEAFFKECPHP
Sbjct: 50  RMRETEEFESGTKSSSENHEVGSGDDQLNNQRPNKKKRYHRHTQHQIQQMEAFFKECPHP 109

Query: 116 DDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREAL 175
           DDKQRKELSREL LEPLQVKFWFQNKRTQMKT HERHENTQLRTENEKLRADNMRYREAL
Sbjct: 110 DDKQRKELSRELNLEPLQVKFWFQNKRTQMKTHHERHENTQLRTENEKLRADNMRYREAL 169

Query: 176 SNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPV 235
           SNA+CPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPV NYPLLS P+
Sbjct: 170 SNATCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVSNYPLLSTPI 229

Query: 236 PSRPLELAVGNFGAQPGIGGGE---MYGAADLLRSISAPTEADKPMIIELAVAAMEELIR 292
           PSRPLEL +G++G      G     M+GAADLLR+ISAP+EADKP+IIELAVAAMEEL+R
Sbjct: 230 PSRPLELGMGSYGGHDLGLGPGGGDMFGAADLLRTISAPSEADKPVIIELAVAAMEELVR 289

Query: 293 MAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVE 352
           MAQMGEPLWMT +D +   LNE+EYVR+FPRGIGPKP+GF CEASR TAVVIMNHISLVE
Sbjct: 290 MAQMGEPLWMTGVDRSTNELNEEEYVRSFPRGIGPKPSGFSCEASRATAVVIMNHISLVE 349

Query: 353 ILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVR 412
           +LMDVNQWST F+GIVSRAMTLEVLSTGVAGNYNGALQVMT+E QVPSPLVPTRESY+VR
Sbjct: 350 MLMDVNQWSTTFTGIVSRAMTLEVLSTGVAGNYNGALQVMTSELQVPSPLVPTRESYFVR 409

Query: 413 YCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV 472
           YCKQHGEGTWAVVDVSLD LRP+PA+RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV
Sbjct: 410 YCKQHGEGTWAVVDVSLDTLRPAPALRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV 469

Query: 473 HNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATN-IPTGEVGVITNQDGRKSMLKLA 531
           H+LY QLVS+G+AFGAKRW+ATLDRQCERLAS MAT+ IP G+ GVITNQ+GRKSMLKLA
Sbjct: 470 HSLYNQLVSSGHAFGAKRWIATLDRQCERLASAMATSIIPHGDAGVITNQEGRKSMLKLA 529

Query: 532 ERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVP 591
           ERMV+SFC GVSAST HTWTTLSGTGADDVRVMTRKSVDDPGRP GIVLSAATSFWLP+P
Sbjct: 530 ERMVMSFCGGVSASTTHTWTTLSGTGADDVRVMTRKSVDDPGRPSGIVLSAATSFWLPLP 589

Query: 592 PKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNM 651
           P RVF FLRDEN+R+EWDILSNGGVVQEMAHIANGRDTGNCVSLLRVN   SANSSQSNM
Sbjct: 590 PNRVFHFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVN---SANSSQSNM 646

Query: 652 LILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGT--SLHGANI 709
           LILQES TD TASFVIYAPVDIV++NVVLNGGDPDYVALLPSGFAILPDG+  S  G  +
Sbjct: 647 LILQESSTDQTASFVIYAPVDIVSINVVLNGGDPDYVALLPSGFAILPDGSTASSGGPGV 706

Query: 710 GEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           GE  SGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSC++
Sbjct: 707 GEHGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCDN 759


>gi|357453443|ref|XP_003596998.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355486046|gb|AES67249.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 774

 Score = 1275 bits (3298), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 659/780 (84%), Positives = 695/780 (89%), Gaps = 23/780 (2%)

Query: 1   MPTGVMIPARNMPSTIGRNGN-VGGLGSSSGLT----LSQPTNMMEGQLH---PLDMTQN 52
           M  G+MIPA NM S IGRN N VG  G SS L+    + QP  M  GQ H   P DMTQN
Sbjct: 1   MQAGLMIPASNMHSMIGRNNNNVGVFGLSSSLSLSQKMFQPNLMEAGQHHQLLPFDMTQN 60

Query: 53  ---TSESEIARLREEE-FDS-TKSG-SENHEGA-SGDDQEQRPNKKKRYHRHTQHQIQEM 105
              TSES++ R+RE+E FDS TKSG SEN E A SG+DQE R  KKKRYHRHTQHQIQEM
Sbjct: 61  NNNTSESDVPRIREDELFDSATKSGNSENQEAANSGEDQEPRA-KKKRYHRHTQHQIQEM 119

Query: 106 EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLR 165
           EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ ERHENT LRTENEKLR
Sbjct: 120 EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQQERHENTSLRTENEKLR 179

Query: 166 ADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPV 225
           ADNMR+REALSNASCPNCGGPTAIGEMSFDEHHLR+EN+RLREEIDRISAIAAKYVGKPV
Sbjct: 180 ADNMRFREALSNASCPNCGGPTAIGEMSFDEHHLRIENSRLREEIDRISAIAAKYVGKPV 239

Query: 226 VNYPLLSPP-VPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAV 284
           V+YPLLSP  VP RPLEL +G FG Q    GG+MYGA DLLRSIS PTEADKPMIIELAV
Sbjct: 240 VSYPLLSPSSVPPRPLELGIGGFGGQ-PGMGGDMYGAGDLLRSISGPTEADKPMIIELAV 298

Query: 285 AAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVI 344
           AAMEELI MAQMG+PLW+ +L+G  ++LNE+EYVR+FPRGIGPKP GFKCEASRE++VVI
Sbjct: 299 AAMEELIGMAQMGDPLWLPTLEG-GSILNEEEYVRSFPRGIGPKPAGFKCEASRESSVVI 357

Query: 345 MNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVP 404
           MNH++LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE QVPSPLVP
Sbjct: 358 MNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPSPLVP 417

Query: 405 TRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEH 464
           TRESY+VRYCKQH +GTWAVVDVSLDNLRPSP+ R RRRPSGCLIQEMPNGYSKV WVEH
Sbjct: 418 TRESYFVRYCKQHADGTWAVVDVSLDNLRPSPSARSRRRPSGCLIQEMPNGYSKVIWVEH 477

Query: 465 VEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGR 524
           VEVDDRGVHNLYKQLVS+G+AFGAKRW+ATLDRQCERLAS MATNIPT +VGVITNQDGR
Sbjct: 478 VEVDDRGVHNLYKQLVSSGHAFGAKRWIATLDRQCERLASAMATNIPTVDVGVITNQDGR 537

Query: 525 KSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAAT 584
           KSMLKLAERM ISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRP GIVLSAAT
Sbjct: 538 KSMLKLAERMCISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPAGIVLSAAT 597

Query: 585 SFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSA 644
           SFWLPVPPKRVF+FLRDEN+RSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVN   SA
Sbjct: 598 SFWLPVPPKRVFEFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVN---SA 654

Query: 645 NSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPD-GTS 703
           NSSQSNMLILQESCTD T SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPD  T+
Sbjct: 655 NSSQSNMLILQESCTDTTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTTT 714

Query: 704 LHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
             G        GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS E A
Sbjct: 715 NGGGVGETGHGGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSGEVA 774


>gi|357453445|ref|XP_003596999.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355486047|gb|AES67250.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 787

 Score = 1259 bits (3259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 657/793 (82%), Positives = 694/793 (87%), Gaps = 36/793 (4%)

Query: 1   MPTGVMIPARNMPSTIGRNGN-VGGLGSSSGLT----LSQPTNMMEGQLH---PLDMTQN 52
           M  G+MIPA NM S IGRN N VG  G SS L+    + QP  M  GQ H   P DMTQN
Sbjct: 1   MQAGLMIPASNMHSMIGRNNNNVGVFGLSSSLSLSQKMFQPNLMEAGQHHQLLPFDMTQN 60

Query: 53  ---TSESEIARLREEE-FDS-TKSG-SENHEGA-SGDDQEQRPNKKKRYHRHTQHQIQEM 105
              TSES++ R+RE+E FDS TKSG SEN E A SG+DQE R  KKKRYHRHTQHQIQEM
Sbjct: 61  NNNTSESDVPRIREDELFDSATKSGNSENQEAANSGEDQEPRA-KKKRYHRHTQHQIQEM 119

Query: 106 EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLR 165
           EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ ERHENT LRTENEKLR
Sbjct: 120 EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQQERHENTSLRTENEKLR 179

Query: 166 ADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPV 225
           ADNMR+REALSNASCPNCGGPTAIGEMSFDEHHLR+EN+RLREEIDRISAIAAKYVGKPV
Sbjct: 180 ADNMRFREALSNASCPNCGGPTAIGEMSFDEHHLRIENSRLREEIDRISAIAAKYVGKPV 239

Query: 226 VNYPLLSPP-VPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAV 284
           V+YPLLSP  VP RPLEL +G FG Q    GG+MYGA DLLRSIS PTEADKPMIIELAV
Sbjct: 240 VSYPLLSPSSVPPRPLELGIGGFGGQ-PGMGGDMYGAGDLLRSISGPTEADKPMIIELAV 298

Query: 285 AAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVI 344
           AAMEELI MAQMG+PLW+ +L+G  ++LNE+EYVR+FPRGIGPKP GFKCEASRE++VVI
Sbjct: 299 AAMEELIGMAQMGDPLWLPTLEG-GSILNEEEYVRSFPRGIGPKPAGFKCEASRESSVVI 357

Query: 345 MNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVP 404
           MNH++LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE QVPSPLVP
Sbjct: 358 MNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPSPLVP 417

Query: 405 TRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEH 464
           TRESY+VRYCKQH +GTWAVVDVSLDNLRPSP+ R RRRPSGCLIQEMPNGYSKV WVEH
Sbjct: 418 TRESYFVRYCKQHADGTWAVVDVSLDNLRPSPSARSRRRPSGCLIQEMPNGYSKVIWVEH 477

Query: 465 VEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVG-------- 516
           VEVDDRGVHNLYKQLVS+G+AFGAKRW+ATLDRQCERLAS MATNIPT ++         
Sbjct: 478 VEVDDRGVHNLYKQLVSSGHAFGAKRWIATLDRQCERLASAMATNIPTVDMEFFMINEHY 537

Query: 517 -----VITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDD 571
                VITNQDGRKSMLKLAERM ISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDD
Sbjct: 538 DIVMLVITNQDGRKSMLKLAERMCISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDD 597

Query: 572 PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGN 631
           PGRP GIVLSAATSFWLPVPPKRVF+FLRDEN+RSEWDILSNGGVVQEMAHIANGRDTGN
Sbjct: 598 PGRPAGIVLSAATSFWLPVPPKRVFEFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGN 657

Query: 632 CVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALL 691
           CVSLLRVN   SANSSQSNMLILQESCTD T SFVIYAPVDIVAMNVVLNGGDPDYVALL
Sbjct: 658 CVSLLRVN---SANSSQSNMLILQESCTDTTGSFVIYAPVDIVAMNVVLNGGDPDYVALL 714

Query: 692 PSGFAILPD-GTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACT 750
           PSGFAILPD  T+  G        GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACT
Sbjct: 715 PSGFAILPDGTTTNGGGVGETGHGGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACT 774

Query: 751 VERIKASLSCESA 763
           VERIKASLS E A
Sbjct: 775 VERIKASLSGEVA 787


>gi|357471231|ref|XP_003605900.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355506955|gb|AES88097.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 734

 Score = 1240 bits (3208), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/739 (83%), Positives = 669/739 (90%), Gaps = 20/739 (2%)

Query: 37  TNMME-GQLHPLDMTQNTSESEIARLREEEFDS-TKSGSENHEG--ASGDDQEQRPNKKK 92
           +N++E GQ HPL+M QNTSES++ R+RE+EF+S TKS SENHEG  ASG++Q  RP K+K
Sbjct: 4   SNLLEAGQFHPLEMMQNTSESDVPRIREDEFESGTKSCSENHEGGAASGEEQGPRP-KRK 62

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERH 152
           RYHRHTQHQIQEME+FFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 
Sbjct: 63  RYHRHTQHQIQEMESFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERS 122

Query: 153 ENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDR 212
           EN+QLR +NEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDR
Sbjct: 123 ENSQLRADNEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDR 182

Query: 213 ISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAA-DLLRSISAP 271
           IS +AAKYVGKPVVNY  +SP +P R     +G FG   GIG  +MYGA+ D+LRSIS P
Sbjct: 183 ISTMAAKYVGKPVVNYSNISPSLPPR---TEIG-FGNPQGIGTMDMYGASGDILRSISGP 238

Query: 272 TEADKPMIIELAVAAMEELIRMAQMGEPLWM-TSLDGTAAVLNEDEYVRTFPRGIGPKPT 330
           TEADKP+IIELAVAAMEELI MAQMG+PLW+ T+ +G A VLNEDEYVR+FPRGIGPKP 
Sbjct: 239 TEADKPIIIELAVAAMEELIGMAQMGDPLWLRTTPEGAATVLNEDEYVRSFPRGIGPKPN 298

Query: 331 GFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ 390
           GFKCEASRE++VVIMNH++LVEILMDVNQWSTVF+GIVSRA+T+EVLSTGVAGNYNGALQ
Sbjct: 299 GFKCEASRESSVVIMNHVNLVEILMDVNQWSTVFAGIVSRAVTVEVLSTGVAGNYNGALQ 358

Query: 391 VMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQ 450
           VMTAEFQVPSPLVPTRESY+VRYCKQH +GTWAVVDVSLDNLRPSP+ RCRRRPSGCLIQ
Sbjct: 359 VMTAEFQVPSPLVPTRESYFVRYCKQHPDGTWAVVDVSLDNLRPSPSSRCRRRPSGCLIQ 418

Query: 451 EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI 510
           EMPNGYSKVTWVEHVEVD+RGVHNLYKQLV+TG+AFGAKRWVATLDRQCERLAS MATNI
Sbjct: 419 EMPNGYSKVTWVEHVEVDERGVHNLYKQLVNTGDAFGAKRWVATLDRQCERLASSMATNI 478

Query: 511 PTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 570
           PT +VGVITNQ+GRKSMLKLAERMVISFC GVSASTAHTWTTLSGTGADDVRVMTRKSVD
Sbjct: 479 PTVDVGVITNQEGRKSMLKLAERMVISFCGGVSASTAHTWTTLSGTGADDVRVMTRKSVD 538

Query: 571 DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTG 630
           DPGRPPGIVLSAATSFWLPVPP +VF+FLR+EN+R+EWDILSNGGVVQEMAHIANGRDTG
Sbjct: 539 DPGRPPGIVLSAATSFWLPVPPTQVFEFLRNENSRTEWDILSNGGVVQEMAHIANGRDTG 598

Query: 631 NCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVAL 690
           NCVSLLRVN   S NSSQSNMLILQES TD T SFVIYAPVD+VAMNVVLNGGDPDYVAL
Sbjct: 599 NCVSLLRVN---SPNSSQSNMLILQESVTDATGSFVIYAPVDMVAMNVVLNGGDPDYVAL 655

Query: 691 LPSGFAILPD------GTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVN 744
           LPSGFAIL D      G    G     A  GGSLLTVAFQILVDS PTAKLSLGSVATVN
Sbjct: 656 LPSGFAILSDGNGNGVGGETGGGVGAGAGGGGSLLTVAFQILVDSTPTAKLSLGSVATVN 715

Query: 745 NLIACTVERIKASLSCESA 763
           +LIACTVERIKASLS ESA
Sbjct: 716 SLIACTVERIKASLSGESA 734


>gi|225444363|ref|XP_002266688.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR 2
           [Vitis vinifera]
 gi|302144076|emb|CBI23181.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score = 1234 bits (3192), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 597/732 (81%), Positives = 654/732 (89%), Gaps = 9/732 (1%)

Query: 33  LSQPTNMMEGQLHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQE--QRPNK 90
           + QP NM +   H LDM   T ESE+ ++R+EEF+S KSG+EN +  SGDDQ+  QRP K
Sbjct: 1   MFQP-NMFDSHHHLLDMPHKTPESEMGKIRDEEFES-KSGTENMDAPSGDDQDPNQRP-K 57

Query: 91  KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK QHE
Sbjct: 58  KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHE 117

Query: 151 RHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEI 210
           RHEN+ LR ENEKLRA+N+RY+EALSNA+CP+CGGP +IGEMSFDE HLR+ENARLR+EI
Sbjct: 118 RHENSNLRAENEKLRAENIRYKEALSNATCPHCGGPASIGEMSFDEQHLRIENARLRDEI 177

Query: 211 DRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISA 270
           DRIS IAAKYVGKP+V+YP LS    SR L+L VGNFGAQ GI G +MYG  DLLRS+S 
Sbjct: 178 DRISGIAAKYVGKPMVSYPHLSTHTSSRSLDLGVGNFGAQSGIVG-DMYGGGDLLRSVSL 236

Query: 271 PTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPT 330
           PTEADKPMI+ELAVAAMEELIRMAQ GEPLW+ + D +  +L+EDEY+RTFPRGIGPKP 
Sbjct: 237 PTEADKPMIVELAVAAMEELIRMAQAGEPLWIPTSDNSTEILSEDEYLRTFPRGIGPKPL 296

Query: 331 GFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ 390
           G K EASRETAVVIMNHISLVEILMDVNQWS+VFSGIVSRAMTLEVLSTGVAGNYNGALQ
Sbjct: 297 GLKSEASRETAVVIMNHISLVEILMDVNQWSSVFSGIVSRAMTLEVLSTGVAGNYNGALQ 356

Query: 391 VMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQ 450
           VMTAEFQVPSPLVPTRE+Y+VRYCK H +GTWAVVDVSLDNLR  P  R RRRPSGCLIQ
Sbjct: 357 VMTAEFQVPSPLVPTRENYFVRYCKHHPDGTWAVVDVSLDNLRSGPITRNRRRPSGCLIQ 416

Query: 451 EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI 510
           E+PNGYSKV WVEHVEVDDR VHN+Y+ LV++G AFGAKRWVATLDRQCERLAS MA+NI
Sbjct: 417 ELPNGYSKVIWVEHVEVDDRAVHNIYRPLVNSGLAFGAKRWVATLDRQCERLASAMASNI 476

Query: 511 PTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 570
           P G+VGVIT+ +GRKSMLKLAERMV+SFCAGV AST HTWTTLSG+GADDVRVMTRKS+D
Sbjct: 477 PAGDVGVITSPEGRKSMLKLAERMVMSFCAGVGASTTHTWTTLSGSGADDVRVMTRKSMD 536

Query: 571 DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTG 630
           DPGRPPGIVLSAATSFW+PVPPKRVFDFLR EN+RSEWDILSNGG+VQEMAHIANGRD G
Sbjct: 537 DPGRPPGIVLSAATSFWIPVPPKRVFDFLRAENSRSEWDILSNGGLVQEMAHIANGRDPG 596

Query: 631 NCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVAL 690
           NCVSLLRVN   SANSSQSNMLILQESCTDPT S+VIYAPVDIVAMNVVL+GGDPDYVAL
Sbjct: 597 NCVSLLRVN---SANSSQSNMLILQESCTDPTGSYVIYAPVDIVAMNVVLSGGDPDYVAL 653

Query: 691 LPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACT 750
           LPSGFAILPDG  LHG  I +  SGGSLLTVAFQILVDS PTAKLSLGSVATVN+LI CT
Sbjct: 654 LPSGFAILPDGAVLHGGGILDVGSGGSLLTVAFQILVDSAPTAKLSLGSVATVNSLIKCT 713

Query: 751 VERIKASLSCES 762
           VERIKA++SCE+
Sbjct: 714 VERIKAAVSCEN 725


>gi|1173622|gb|AAB37230.1| homeobox protein [Phalaenopsis sp. SM9108]
          Length = 768

 Score = 1197 bits (3098), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/780 (76%), Positives = 667/780 (85%), Gaps = 32/780 (4%)

Query: 1   MPTGVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLD--------MTQN 52
           M  GVMIPAR +PS IGRN        SS LTL+Q  N++EGQ  PL             
Sbjct: 1   MLAGVMIPARQVPSMIGRN--------SSALTLAQ-INILEGQQLPLQHQLAELTAQATT 51

Query: 53  TSESEIARLREEEFDSTKSGSENHEGASGD--DQEQRPNKKKRYHRHTQHQIQEMEAFFK 110
           T+ES++ R RE++F+S KSGS+N EG SGD  D  QRP +KKRYHRHTQHQIQEMEAFFK
Sbjct: 52  TAESDMMRAREDDFES-KSGSDNIEGGSGDEHDPNQRP-RKKRYHRHTQHQIQEMEAFFK 109

Query: 111 ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMR 170
           ECPHPDDKQRK LS+ELGLEPLQVKFWFQNKRTQMKTQH+R EN+QLR EN+KLR +N+R
Sbjct: 110 ECPHPDDKQRKALSKELGLEPLQVKFWFQNKRTQMKTQHDRQENSQLRAENDKLRNENLR 169

Query: 171 YREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPL 230
           Y+EALSNASCPNCGGP  +GEMSFDEHHLR+ENARLREEIDRIS IAAKYVGKP+ +YPL
Sbjct: 170 YKEALSNASCPNCGGPATLGEMSFDEHHLRIENARLREEIDRISGIAAKYVGKPMNSYPL 229

Query: 231 LSPPVPSRP-LELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEE 289
           LSP +PSR  L+L VG FG      GG+M+  A+LLRS++   E DKPM+IELAVAAMEE
Sbjct: 230 LSPTLPSRSSLDLGVGGFGLHSPTMGGDMFSPAELLRSVAGQPEVDKPMVIELAVAAMEE 289

Query: 290 LIRMAQMGEPLWMTS--LDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNH 347
           LIRMAQ+GEPLW +S  LDG   +LNE+EYV+ FPRGIGPKP G K EASRETAVVIM+H
Sbjct: 290 LIRMAQLGEPLWTSSPGLDGGNEILNEEEYVQNFPRGIGPKPFGLKSEASRETAVVIMSH 349

Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
           ++LVEILMD NQWST+FSGIVSR MTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE
Sbjct: 350 VNLVEILMDANQWSTMFSGIVSRGMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 409

Query: 408 SYYVRYCKQHGEGTWAVVDVSLDNLRPSP-AVRCRRRPSGCLIQEMPNGYSKVTWVEHVE 466
           SY+VRYCKQH +GTWAVVDVSLD+LRPS   +RCRRRPSGCLIQEMPNGYSKV WVEH E
Sbjct: 410 SYFVRYCKQHPDGTWAVVDVSLDSLRPSSLMMRCRRRPSGCLIQEMPNGYSKVIWVEHFE 469

Query: 467 VDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS 526
           VDDR VH++YK LV++G AFGAKRWV+TLDRQCERLASVMA++IP+GE+GVIT  +GRKS
Sbjct: 470 VDDRSVHSIYKPLVNSGIAFGAKRWVSTLDRQCERLASVMASSIPSGEIGVITTSEGRKS 529

Query: 527 MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSF 586
           MLKLAERMV+SFC GVSAST H WTTLSG+GA+DVRVMTRKSVDDPGRPPGIVL+AATSF
Sbjct: 530 MLKLAERMVLSFCGGVSASTTHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAATSF 589

Query: 587 WLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANS 646
           WLPV PKRVFDFLRDE++RSEWDILSNGGVVQEMAHIANGRD GNCVSLLRVN   S NS
Sbjct: 590 WLPVSPKRVFDFLRDESSRSEWDILSNGGVVQEMAHIANGRDHGNCVSLLRVN---STNS 646

Query: 647 SQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTS--- 703
           +QSNMLILQESCTDPT S+VIYAPVD+VAMNVVLNGGDPDYVALLPSGFAILPDG++   
Sbjct: 647 NQSNMLILQESCTDPTGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGSNGVH 706

Query: 704 -LHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
                     + GGSLLTVAFQILVDS+PTAKLSLGSVATVN+LIACTVERIKA+++ ES
Sbjct: 707 GGGSGIGEVGSGGGSLLTVAFQILVDSIPTAKLSLGSVATVNSLIACTVERIKAAVTGES 766


>gi|147800352|emb|CAN62139.1| hypothetical protein VITISV_039239 [Vitis vinifera]
          Length = 708

 Score = 1187 bits (3072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 578/716 (80%), Positives = 636/716 (88%), Gaps = 11/716 (1%)

Query: 49  MTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEME 106
           M   T ESE+ ++R+EEF+S KSG+EN +  SGDDQ+  QRP KKKRYHRHTQHQIQEME
Sbjct: 1   MPHKTPESEMGKIRDEEFES-KSGTENMDAPSGDDQDPNQRP-KKKRYHRHTQHQIQEME 58

Query: 107 AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRA 166
           AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK QHERHEN+ LR ENEKLRA
Sbjct: 59  AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENSNLRAENEKLRA 118

Query: 167 DNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVV 226
           +N+RY+EALSNA+CP+CGGP +IGEMSFDE HLR+ENARLR+E D      ++   +P+V
Sbjct: 119 ENIRYKEALSNATCPHCGGPASIGEMSFDEQHLRIENARLRDE-DFWDC--SQVCWEPMV 175

Query: 227 NYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAA 286
           +YP LS    SR L+L VGNFGAQ GI G +MYG  DLLRS+S PTEADKPMI+ELAVAA
Sbjct: 176 SYPHLSTHTSSRSLDLGVGNFGAQSGIVG-DMYGGGDLLRSVSLPTEADKPMIVELAVAA 234

Query: 287 MEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMN 346
           MEELIRMAQ GEPLW+ + D +  +L+EDEY+RTFPRGIGPKP G K EASRETAVVIMN
Sbjct: 235 MEELIRMAQAGEPLWIPTSDNSTEILSEDEYLRTFPRGIGPKPLGLKSEASRETAVVIMN 294

Query: 347 HISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTR 406
           HISLVEILMDVNQWS+VFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTR
Sbjct: 295 HISLVEILMDVNQWSSVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTR 354

Query: 407 ESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVE 466
           E+Y+VRYCK H +GTWAVVDVSLDNLR  P  R RRRPSGCLIQE+PNGYSKV WVEHVE
Sbjct: 355 ENYFVRYCKHHPDGTWAVVDVSLDNLRSGPITRNRRRPSGCLIQELPNGYSKVIWVEHVE 414

Query: 467 VDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS 526
           VDDR VHN+Y+ LV++G AFGAKRWVATLDRQCERLAS MA+NIP G+VGVIT+ +GRKS
Sbjct: 415 VDDRAVHNIYRPLVNSGLAFGAKRWVATLDRQCERLASAMASNIPAGDVGVITSPEGRKS 474

Query: 527 MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSF 586
           MLKLAERMV+SFCAGV AST HTWTTLSG+GADDVRVMTRKS+DDPGRPPGIVLSAATSF
Sbjct: 475 MLKLAERMVMSFCAGVGASTTHTWTTLSGSGADDVRVMTRKSMDDPGRPPGIVLSAATSF 534

Query: 587 WLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANS 646
           W+PVPPKRVFDFLR EN+RSEWDILSNGG+VQEMAHIANGRD GNCVSLLRVN   SANS
Sbjct: 535 WIPVPPKRVFDFLRAENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVN---SANS 591

Query: 647 SQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHG 706
           SQSNMLILQESCTDPT S+VIYAPVDIVAMNVVL+GGDPDYVALLPSGFAILPDG  LHG
Sbjct: 592 SQSNMLILQESCTDPTGSYVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGAVLHG 651

Query: 707 ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
             I +  SGGSLLTVAFQILVDS PTAKLSLGSVATVN+LI CTVERIKA++SCE+
Sbjct: 652 GGILDVGSGGSLLTVAFQILVDSAPTAKLSLGSVATVNSLIKCTVERIKAAVSCEN 707


>gi|15220448|ref|NP_172015.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|30679181|ref|NP_849596.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|334182300|ref|NP_001184911.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|75332091|sp|Q94C37.1|HDG2_ARATH RecName: Full=Homeobox-leucine zipper protein HDG2; AltName:
           Full=HD-ZIP protein HDG2; AltName: Full=Homeodomain
           GLABRA 2-like protein 2; AltName: Full=Homeodomain
           transcription factor HDG2; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 2
 gi|14334996|gb|AAK59762.1| At1g05230/YUP8H12_16 [Arabidopsis thaliana]
 gi|20147145|gb|AAM10289.1| At1g05230/YUP8H12_16 [Arabidopsis thaliana]
 gi|222423025|dbj|BAH19495.1| AT1G05230 [Arabidopsis thaliana]
 gi|332189688|gb|AEE27809.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|332189689|gb|AEE27810.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|332189691|gb|AEE27812.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
          Length = 721

 Score = 1186 bits (3069), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 583/709 (82%), Positives = 638/709 (89%), Gaps = 25/709 (3%)

Query: 61  LREEEFDS--TKSGSENHEGASGDDQEQ-RPNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           LR++EFDS  TKSGSEN EG SG+DQ+   PNKKKRYHRHTQ QIQEMEAFFKECPHPDD
Sbjct: 32  LRDDEFDSPNTKSGSENQEGGSGNDQDPLHPNKKKRYHRHTQLQIQEMEAFFKECPHPDD 91

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSN 177
           KQRK+LSREL LEPLQVKFWFQNKRTQMK  HERHEN+ LR ENEKLR DN+RYREAL+N
Sbjct: 92  KQRKQLSRELNLEPLQVKFWFQNKRTQMKNHHERHENSHLRAENEKLRNDNLRYREALAN 151

Query: 178 ASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPS 237
           ASCPNCGGPTAIGEMSFDEH LRLENARLREEIDRISAIAAKYVGKPV NYPL+SPP   
Sbjct: 152 ASCPNCGGPTAIGEMSFDEHQLRLENARLREEIDRISAIAAKYVGKPVSNYPLMSPPPLP 211

Query: 238 RPLEL-AVGNFGAQPGIGGGEMYG--AADLLRSISAPTEADKPMIIELAVAAMEELIRMA 294
                 A+GN G       GE YG    DLL+SI+APTE+DKP+II+L+VAAMEEL+RM 
Sbjct: 212 PRPLELAMGNIG-------GEAYGNNPNDLLKSITAPTESDKPVIIDLSVAAMEELMRMV 264

Query: 295 QMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEIL 354
           Q+ EPLW       + VL+E+EY RTFPRGIGP+P G++ EASRE+AVVIMNH+++VEIL
Sbjct: 265 QVDEPLW------KSLVLDEEEYARTFPRGIGPRPAGYRSEASRESAVVIMNHVNIVEIL 318

Query: 355 MDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYC 414
           MDVNQWST+F+G+VSRAMTL VLSTGVAGNYNGALQVM+AEFQVPSPLVPTRE+Y+ RYC
Sbjct: 319 MDVNQWSTIFAGMVSRAMTLAVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRETYFARYC 378

Query: 415 KQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHN 474
           KQ G+G+WAVVD+SLD+L+P+P  RCRRR SGCLIQE+PNGYSKVTWVEHVEVDDRGVHN
Sbjct: 379 KQQGDGSWAVVDISLDSLQPNPPARCRRRASGCLIQELPNGYSKVTWVEHVEVDDRGVHN 438

Query: 475 LYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERM 534
           LYK +VSTG+AFGAKRWVA LDRQCERLASVMATNI +GEVGVITNQ+GR+SMLKLAERM
Sbjct: 439 LYKHMVSTGHAFGAKRWVAILDRQCERLASVMATNISSGEVGVITNQEGRRSMLKLAERM 498

Query: 535 VISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKR 594
           VISFCAGVSASTAHTWTTLSGTGA+DVRVMTRKSVDDPGRPPGIVLSAATSFW+PVPPKR
Sbjct: 499 VISFCAGVSASTAHTWTTLSGTGAEDVRVMTRKSVDDPGRPPGIVLSAATSFWIPVPPKR 558

Query: 595 VFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLIL 654
           VFDFLRDEN+R+EWDILSNGGVVQEMAHIANGRDTGNCVSLLRVN   SANSSQSNMLIL
Sbjct: 559 VFDFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVN---SANSSQSNMLIL 615

Query: 655 QESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAAS 714
           QESCTDPTASFVIYAPVDIVAMN+VLNGGDPDYVALLPSGFAILPDG +  GA  G+   
Sbjct: 616 QESCTDPTASFVIYAPVDIVAMNIVLNGGDPDYVALLPSGFAILPDGNANSGAPGGD--- 672

Query: 715 GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
           GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKAS+SCE+A
Sbjct: 673 GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASMSCETA 721


>gi|186478150|ref|NP_001117231.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|332189690|gb|AEE27811.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
          Length = 719

 Score = 1181 bits (3054), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/709 (81%), Positives = 636/709 (89%), Gaps = 27/709 (3%)

Query: 61  LREEEFDS--TKSGSENHEGASGDDQEQ-RPNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           LR++EFDS  TKSGSEN EG SG+DQ+   PNKKKRYHRHTQ QIQEMEAFFKECPHPDD
Sbjct: 32  LRDDEFDSPNTKSGSENQEGGSGNDQDPLHPNKKKRYHRHTQLQIQEMEAFFKECPHPDD 91

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSN 177
           KQRK+LSREL LEPLQVKFWFQNKRTQMK  HERHEN+ LR ENEKLR DN+RYREAL+N
Sbjct: 92  KQRKQLSRELNLEPLQVKFWFQNKRTQMKNHHERHENSHLRAENEKLRNDNLRYREALAN 151

Query: 178 ASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPS 237
           ASCPNCGGPTAIGEMSFDEH LRLENARLREEIDRISAIAAKYVGKPV NYPL+SPP   
Sbjct: 152 ASCPNCGGPTAIGEMSFDEHQLRLENARLREEIDRISAIAAKYVGKPVSNYPLMSPPPLP 211

Query: 238 RPLEL-AVGNFGAQPGIGGGEMYG--AADLLRSISAPTEADKPMIIELAVAAMEELIRMA 294
                 A+GN G       GE YG    DLL+SI+APTE+DKP+II+L+VAAMEEL+RM 
Sbjct: 212 PRPLELAMGNIG-------GEAYGNNPNDLLKSITAPTESDKPVIIDLSVAAMEELMRMV 264

Query: 295 QMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEIL 354
           Q+ EPLW       + VL+E+EY RTFPRGIGP+P G++ EASRE+AVVIMNH+++VEIL
Sbjct: 265 QVDEPLW------KSLVLDEEEYARTFPRGIGPRPAGYRSEASRESAVVIMNHVNIVEIL 318

Query: 355 MDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYC 414
           MDVNQWST+F+G+VSRAMTL VLSTGVAGNYNGALQVM+AEFQVPSPLVPTRE+Y+ RYC
Sbjct: 319 MDVNQWSTIFAGMVSRAMTLAVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRETYFARYC 378

Query: 415 KQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHN 474
           KQ G+G+WAVVD+SLD+L+P+P  RCRRR SGCLIQE+PNGYSKVTWVEHVEVDDRGVHN
Sbjct: 379 KQQGDGSWAVVDISLDSLQPNPPARCRRRASGCLIQELPNGYSKVTWVEHVEVDDRGVHN 438

Query: 475 LYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERM 534
           LYK +VSTG+AFGAKRWVA LDRQCERLASVMATNI +GEVGVITNQ+GR+SMLKLAERM
Sbjct: 439 LYKHMVSTGHAFGAKRWVAILDRQCERLASVMATNISSGEVGVITNQEGRRSMLKLAERM 498

Query: 535 VISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKR 594
           VISFCAGVSASTAHTWTTLSGTGA+DVRVMTRKSVDDPGRPPGIVLSAATSFW+PVPPKR
Sbjct: 499 VISFCAGVSASTAHTWTTLSGTGAEDVRVMTRKSVDDPGRPPGIVLSAATSFWIPVPPKR 558

Query: 595 VFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLIL 654
           VFDFLRDEN+R+EWDILSNGGVVQEMAHIANGRDTGNCVSLLR     SANSSQSNMLIL
Sbjct: 559 VFDFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLR-----SANSSQSNMLIL 613

Query: 655 QESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAAS 714
           QESCTDPTASFVIYAPVDIVAMN+VLNGGDPDYVALLPSGFAILPDG +  GA  G+   
Sbjct: 614 QESCTDPTASFVIYAPVDIVAMNIVLNGGDPDYVALLPSGFAILPDGNANSGAPGGD--- 670

Query: 715 GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
           GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKAS+SCE+A
Sbjct: 671 GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASMSCETA 719


>gi|12002853|gb|AAG43405.1|AF172931_1 homeobox 1 [Picea abies]
          Length = 763

 Score = 1162 bits (3007), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 573/776 (73%), Positives = 668/776 (86%), Gaps = 28/776 (3%)

Query: 1   MPTGVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIAR 60
           MP G +IPAR++P  + R+    G  +SSGL+L+QP NM EGQ    DM+Q T++SEIA+
Sbjct: 1   MPAGFIIPARHVPPLMARHTK-AGYTTSSGLSLAQP-NMAEGQF---DMSQ-TADSEIAK 54

Query: 61  LREEEFDSTKSGSENHEGASGDDQ--EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK 118
           +REEEF+S KSGS+N EGASG+DQ  E+RP +KKRYHRHTQHQIQEME FFKECPHPDDK
Sbjct: 55  IREEEFES-KSGSDNVEGASGEDQDGERRP-RKKRYHRHTQHQIQEMEMFFKECPHPDDK 112

Query: 119 QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNA 178
           QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLR+ENEKLR++NMRYREAL+NA
Sbjct: 113 QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRSENEKLRSENMRYREALNNA 172

Query: 179 SCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNY---PLLSPPV 235
           SCPNCGGP A+GEMSFDE  LR+ENARLREEIDRIS IAAKYVGKP++++   PL S  +
Sbjct: 173 SCPNCGGPAALGEMSFDEQQLRMENARLREEIDRISGIAAKYVGKPLLSFGPSPLSS--I 230

Query: 236 PSRPLELAVGNFGAQPGIGGGEMYGAADL----LRSISAPTEADKPMIIELAVAAMEELI 291
           P   L+LAVG++G QP IG  ++YG++       RS+  PTE +KPM++ELAVAAMEEL+
Sbjct: 231 PRSNLDLAVGSYGVQPNIGP-DIYGSSSGGEIGNRSLVGPTEGEKPMVVELAVAAMEELV 289

Query: 292 RMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLV 351
           RMAQ+GEPLW +  + +  +LNEDEY+RTFPRGIGP+P G K EASRETAVVIMN I+LV
Sbjct: 290 RMAQLGEPLWTSHPEDSTDILNEDEYIRTFPRGIGPRPYGLKAEASRETAVVIMNAINLV 349

Query: 352 EILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYV 411
           E LMDVNQWS++F GIVSR  T++V STGVAGNYNGALQVM AEFQVPSPLVPTRE Y+V
Sbjct: 350 ETLMDVNQWSSMFPGIVSRPFTVDVFSTGVAGNYNGALQVMHAEFQVPSPLVPTREIYFV 409

Query: 412 RYCKQHGEGTWAVVDVSLDNLR--PSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 469
           RYCKQH +  WAVVDVSLD+LR   S  +RCRRRPSGCLIQEMPN YSKVTWVEHVE DD
Sbjct: 410 RYCKQHSDSIWAVVDVSLDSLRGNSSSVIRCRRRPSGCLIQEMPNSYSKVTWVEHVEADD 469

Query: 470 RGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK 529
           R VH++Y+QLV++G AFGAKRW+ATL RQCERLASV+A+NIP  ++GVI + +GRKS+LK
Sbjct: 470 RAVHHIYRQLVNSGMAFGAKRWIATLQRQCERLASVLASNIPARDLGVIPSPEGRKSILK 529

Query: 530 LAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP 589
           LAERMV SFCAGVSASTAHTWTTLSG+GA+DVRVMTRKS+DDPGRPPGI+LSAATS WLP
Sbjct: 530 LAERMVTSFCAGVSASTAHTWTTLSGSGAEDVRVMTRKSIDDPGRPPGIILSAATSLWLP 589

Query: 590 VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQS 649
           VPPK+VFDFLRDEN+R+EWDILSNGG+VQE+ HIANG+D GNCVSLLRVN   + NS+QS
Sbjct: 590 VPPKKVFDFLRDENSRNEWDILSNGGLVQEVDHIANGQDPGNCVSLLRVN---TVNSNQS 646

Query: 650 NMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG---TSLHG 706
           NMLILQESCTD + SFVIYAPVDIVAMNVVL+GGDPDYVALLPSGFAILPD     ++  
Sbjct: 647 NMLILQESCTDASGSFVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDSPKCMAVTN 706

Query: 707 ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           + I +  +GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LI+CTV+RIKA++  E+
Sbjct: 707 SGINDLGTGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLISCTVDRIKAAVMREN 762


>gi|2388574|gb|AAB71455.1| Strong similarity to Phalaenopsis homeobox protein (gb|U34743)
           [Arabidopsis thaliana]
          Length = 749

 Score = 1157 bits (2992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/749 (77%), Positives = 636/749 (84%), Gaps = 67/749 (8%)

Query: 61  LREEEFDS--TKSGSENHEGASGDDQEQ-RPNKKKRYHRHTQHQIQEMEA---------- 107
           LR++EFDS  TKSGSEN EG SG+DQ+   PNKKKRYHRHTQ QIQEMEA          
Sbjct: 22  LRDDEFDSPNTKSGSENQEGGSGNDQDPLHPNKKKRYHRHTQLQIQEMEAYVFNLLTYFN 81

Query: 108 ----------------FFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
                           FFKECPHPDDKQRK+LSREL LEPLQVKFWFQNKRTQMK  HER
Sbjct: 82  FLVCFLTILLFWLLNRFFKECPHPDDKQRKQLSRELNLEPLQVKFWFQNKRTQMKNHHER 141

Query: 152 HENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEID 211
           HEN+ LR ENEKLR DN+RYREAL+NASCPNCGGPTAIGEMSFDEH LRLENARLREEID
Sbjct: 142 HENSHLRAENEKLRNDNLRYREALANASCPNCGGPTAIGEMSFDEHQLRLENARLREEID 201

Query: 212 RISAIAAKYVGKPVVNYPLLSPPVPSRPLEL-AVGNFGAQPGIGGGEMYG--AADLLRSI 268
           RISAIAAKYVGKPV NYPL+SPP         A+GN G       GE YG    DLL+SI
Sbjct: 202 RISAIAAKYVGKPVSNYPLMSPPPLPPRPLELAMGNIG-------GEAYGNNPNDLLKSI 254

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
           +APTE+DKP+II+L+VAAMEEL+RM Q+ EPLW       + VL+E+EY RTFPRGIGP+
Sbjct: 255 TAPTESDKPVIIDLSVAAMEELMRMVQVDEPLW------KSLVLDEEEYARTFPRGIGPR 308

Query: 329 PTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGA 388
           P G++ EASRE+AVVIMNH+++VEILMDVNQWST+F+G+VSRAMTL VLSTGVAGNYNGA
Sbjct: 309 PAGYRSEASRESAVVIMNHVNIVEILMDVNQWSTIFAGMVSRAMTLAVLSTGVAGNYNGA 368

Query: 389 LQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCL 448
           LQVM+AEFQVPSPLVPTRE+Y+ RYCKQ G+G+WAVVD+SLD+L+P+P  RCRRR SGCL
Sbjct: 369 LQVMSAEFQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQPNPPARCRRRASGCL 428

Query: 449 IQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMAT 508
           IQE+PNGYSKVTWVEHVEVDDRGVHNLYK +VSTG+AFGAKRWVA LDRQCERLASVMAT
Sbjct: 429 IQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASVMAT 488

Query: 509 NIPTGEVG--------------VITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLS 554
           NI +GEVG              VITNQ+GR+SMLKLAERMVISFCAGVSASTAHTWTTLS
Sbjct: 489 NISSGEVGESESESQFYINEYAVITNQEGRRSMLKLAERMVISFCAGVSASTAHTWTTLS 548

Query: 555 GTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNG 614
           GTGA+DVRVMTRKSVDDPGRPPGIVLSAATSFW+PVPPKRVFDFLRDEN+R+EWDILSNG
Sbjct: 549 GTGAEDVRVMTRKSVDDPGRPPGIVLSAATSFWIPVPPKRVFDFLRDENSRNEWDILSNG 608

Query: 615 GVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIV 674
           GVVQEMAHIANGRDTGNCVSLLR     SANSSQSNMLILQESCTDPTASFVIYAPVDIV
Sbjct: 609 GVVQEMAHIANGRDTGNCVSLLR-----SANSSQSNMLILQESCTDPTASFVIYAPVDIV 663

Query: 675 AMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAK 734
           AMN+VLNGGDPDYVALLPSGFAILPDG +  GA  G+   GGSLLTVAFQILVDSVPTAK
Sbjct: 664 AMNIVLNGGDPDYVALLPSGFAILPDGNANSGAPGGD---GGSLLTVAFQILVDSVPTAK 720

Query: 735 LSLGSVATVNNLIACTVERIKASLSCESA 763
           LSLGSVATVNNLIACTVERIKAS+SCE+A
Sbjct: 721 LSLGSVATVNNLIACTVERIKASMSCETA 749


>gi|397134753|gb|AFO11042.1| HD-1D [Gossypium hirsutum]
          Length = 725

 Score = 1156 bits (2991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/722 (77%), Positives = 628/722 (86%), Gaps = 10/722 (1%)

Query: 45  HPLDMTQNTSESEI-ARLREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQ 101
           H  DM+  TSESE+  ++R+++++  KS +E  +  SGDDQ+  QRP KKKRYHRHTQ Q
Sbjct: 11  HMFDMSHKTSESELMGKIRDDDYE-IKSVNETMDAPSGDDQDPDQRP-KKKRYHRHTQRQ 68

Query: 102 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTEN 161
           IQEMEAFFKECPHPDDKQRKEL RELGLEPLQVKFWFQNKRTQMK QHERHEN  L+ EN
Sbjct: 69  IQEMEAFFKECPHPDDKQRKELGRELGLEPLQVKFWFQNKRTQMKAQHERHENAILKAEN 128

Query: 162 EKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYV 221
           EKLRA+N RY+EALSNA+CP+CGGP A+GEMSFDE HLR+ENARLREEIDRIS IAAKYV
Sbjct: 129 EKLRAENNRYKEALSNATCPSCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYV 188

Query: 222 GKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIE 281
           GKP+ + P LS  + SR  +L   NFG Q G  G EM  + DLLRS+S PTEADKPMI+E
Sbjct: 189 GKPLSSLPHLSSHLHSRSADLGASNFGNQSGFVG-EMDRSGDLLRSVSGPTEADKPMIVE 247

Query: 282 LAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETA 341
           LAVAAMEELIRMAQ GEPLW+   D +  VLNEDEY+RTFPRGIGPKP G + EASRE+A
Sbjct: 248 LAVAAMEELIRMAQSGEPLWVPG-DNSTDVLNEDEYLRTFPRGIGPKPLGLRSEASRESA 306

Query: 342 VVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSP 401
           VVIMNH++LVEILMDVNQWS+VF GIVSRAMTLEVLSTGVAG  NGALQVMTAEFQVPSP
Sbjct: 307 VVIMNHVNLVEILMDVNQWSSVFCGIVSRAMTLEVLSTGVAGKCNGALQVMTAEFQVPSP 366

Query: 402 LVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTW 461
           LVPTRE+Y+ RYCKQH +GTWAVVDVSLDNLRP+P  +CRRRPSGCLIQE+PNGYSKV W
Sbjct: 367 LVPTRENYFARYCKQHIDGTWAVVDVSLDNLRPNPMSKCRRRPSGCLIQELPNGYSKVIW 426

Query: 462 VEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQ 521
           VEHVEVDDR VHN+Y+ +V++G AFGAKRWVATLDRQCERLAS MA+NIP G++ VIT+ 
Sbjct: 427 VEHVEVDDRAVHNIYRPVVNSGLAFGAKRWVATLDRQCERLASSMASNIPAGDLCVITSP 486

Query: 522 DGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLS 581
           +GRKSMLKLAERMV SFC GV ASTAH WTTLS TG+DDVRVMTRKS+DDPGRPPGIVLS
Sbjct: 487 EGRKSMLKLAERMVTSFCTGVGASTAHAWTTLSATGSDDVRVMTRKSMDDPGRPPGIVLS 546

Query: 582 AATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCL 641
           AATSFW+ VPPKRVFDFLRDEN+RSEWDILSNGG+VQEMAHIANGRD GNCVSLLRVN  
Sbjct: 547 AATSFWIQVPPKRVFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVN-- 604

Query: 642 QSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG 701
            SANSSQSNMLILQESCTD   S+VIYAPV+IVAMN+VL+GGDPDYVALLPSGFAILPDG
Sbjct: 605 -SANSSQSNMLILQESCTDAKGSYVIYAPVNIVAMNIVLSGGDPDYVALLPSGFAILPDG 663

Query: 702 TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
             ++G  I E  SGGSLLTVAFQILVDSVPTAKLSLGSVATVN+LI CTVERIKA++ C 
Sbjct: 664 PGVNGGGILEIGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVKCN 723

Query: 762 SA 763
           +A
Sbjct: 724 NA 725


>gi|397134751|gb|AFO11041.1| HD-1A [Gossypium hirsutum]
          Length = 725

 Score = 1156 bits (2991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 562/722 (77%), Positives = 630/722 (87%), Gaps = 10/722 (1%)

Query: 45  HPLDMTQNTSESEI-ARLREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQ 101
           H  DM+  TSESE+  ++R+++++  KS +E  +  SGDDQ+  QRP K K YHRHTQ Q
Sbjct: 11  HMFDMSHKTSESELMGKVRDDDYE-IKSVTETMDAPSGDDQDPDQRP-KMKCYHRHTQRQ 68

Query: 102 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTEN 161
           IQEMEAFFKECPHPDDKQRKEL RELGLEPLQVKFWFQNKRTQMK QHERHEN  L+ EN
Sbjct: 69  IQEMEAFFKECPHPDDKQRKELGRELGLEPLQVKFWFQNKRTQMKAQHERHENAILKAEN 128

Query: 162 EKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYV 221
           EKLRA+N RY+EALSNA+CP+CGGP A+GEMSFDE  LR+ENARLREEIDRIS IAAKYV
Sbjct: 129 EKLRAENNRYKEALSNATCPSCGGPAALGEMSFDEQLLRIENARLREEIDRISGIAAKYV 188

Query: 222 GKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIE 281
           GKP+ + P LS  + SR ++L   NFG Q G  G EM  + DLLRS+S PTEADKPMI+E
Sbjct: 189 GKPLSSLPHLSSHLHSRSVDLGASNFGTQSGFVG-EMDRSGDLLRSVSGPTEADKPMIVE 247

Query: 282 LAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETA 341
           LAVAAMEELIRMAQ GEPLW+   D +  VL+EDEY+RTFPRGIGPKP G + EASRE+A
Sbjct: 248 LAVAAMEELIRMAQSGEPLWVPG-DNSIDVLSEDEYLRTFPRGIGPKPLGLRSEASRESA 306

Query: 342 VVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSP 401
           VVIMNH++LVEILMDVNQWS+VF GIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSP
Sbjct: 307 VVIMNHVNLVEILMDVNQWSSVFCGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSP 366

Query: 402 LVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTW 461
           LVPTRE+Y+VRYCKQH +GTWAVVDVSLDNLRP+P  +CRRRPSGCLIQE+PNGYSKV W
Sbjct: 367 LVPTRENYFVRYCKQHIDGTWAVVDVSLDNLRPNPMSKCRRRPSGCLIQELPNGYSKVIW 426

Query: 462 VEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQ 521
           VEHVEVDDR +HN+Y+ +V++G AFGAKRWVATLDRQCERLAS MA+NIP G++ VIT+ 
Sbjct: 427 VEHVEVDDRAIHNIYRPVVNSGLAFGAKRWVATLDRQCERLASSMASNIPAGDLCVITSL 486

Query: 522 DGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLS 581
           +GRKSMLKLAERMV SFC GV ASTAH WT+LS TG+DDVRVMTRKS+DDPGRPPGIVLS
Sbjct: 487 EGRKSMLKLAERMVTSFCTGVGASTAHAWTSLSATGSDDVRVMTRKSMDDPGRPPGIVLS 546

Query: 582 AATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCL 641
           AATSFW+PVPPKRVFDFLRDEN+RSEWDILSNGG+VQEMAHIANGRD GNCVSLLRVN  
Sbjct: 547 AATSFWIPVPPKRVFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVN-- 604

Query: 642 QSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG 701
            SANSSQSNMLILQESCTD T S+VIYAPVDIVAMNVVL+GGDPDY+ALLPSGFAILPDG
Sbjct: 605 -SANSSQSNMLILQESCTDATGSYVIYAPVDIVAMNVVLSGGDPDYLALLPSGFAILPDG 663

Query: 702 TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
             ++G  I E  SGGSLLTVAFQILVDSVPTAKLSLGSV TVN+LI CTVERIKA++ C 
Sbjct: 664 PGVNGGGILEIGSGGSLLTVAFQILVDSVPTAKLSLGSVTTVNSLIKCTVERIKAAVMCN 723

Query: 762 SA 763
           +A
Sbjct: 724 NA 725


>gi|224078678|ref|XP_002305602.1| predicted protein [Populus trichocarpa]
 gi|222848566|gb|EEE86113.1| predicted protein [Populus trichocarpa]
          Length = 725

 Score = 1156 bits (2990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 558/729 (76%), Positives = 629/729 (86%), Gaps = 11/729 (1%)

Query: 38  NMMEGQLHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQ---EQRPNKKKRY 94
           NM EG  H  DM   +SE++ ++L++++++ TKSG+E  E  SGDDQ   EQ P KKKRY
Sbjct: 5   NMFEGH-HMFDMASKSSENDSSKLKDDDYE-TKSGTETMEAQSGDDQDPSEQHP-KKKRY 61

Query: 95  HRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHEN 154
           HRHTQ QIQ+MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK QHER EN
Sbjct: 62  HRHTQRQIQDMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERSEN 121

Query: 155 TQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRIS 214
           + L+ ENE+LR +N RY+EAL NASCPNCGGP A+GEMSFDE HLR+EN RLREEIDRIS
Sbjct: 122 SILKAENERLRVENNRYKEALRNASCPNCGGPAALGEMSFDEQHLRIENVRLREEIDRIS 181

Query: 215 AIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEA 274
            IAAKYVGKP+ +   LSP +PSR L+L V NFGAQ G  G EM+GA DLLRS++ PTEA
Sbjct: 182 GIAAKYVGKPLSSLSNLSPHLPSRSLDLGVSNFGAQSGFVG-EMFGATDLLRSVTGPTEA 240

Query: 275 DKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKC 334
           DK MI+E+AVAAMEEL+R+AQ GEPLW+   + T  +LNE+EY+RTF RGIGPKP G + 
Sbjct: 241 DKSMIVEIAVAAMEELMRIAQAGEPLWIQGENNTE-MLNEEEYLRTFTRGIGPKPLGMRS 299

Query: 335 EASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTA 394
           EASRE+AVVIMNH++LVEILMD NQWST+F GIVSRAMTLEVLSTGVAGNYNGALQVMTA
Sbjct: 300 EASRESAVVIMNHVNLVEILMDANQWSTIFCGIVSRAMTLEVLSTGVAGNYNGALQVMTA 359

Query: 395 EFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPN 454
           EFQVPSP+VPTRE+Y+VRYCKQH +GTWAVVDVSLD+LRPS   +CRRRPSGCLIQE+PN
Sbjct: 360 EFQVPSPIVPTRENYFVRYCKQHTDGTWAVVDVSLDSLRPSLLSKCRRRPSGCLIQELPN 419

Query: 455 GYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGE 514
           GYSKV WVEH+EVDDR V N+Y+ LV++G AFGAKRWV TLDRQCERLAS MA NIP+G+
Sbjct: 420 GYSKVVWVEHIEVDDRSVQNIYRPLVNSGLAFGAKRWVGTLDRQCERLASSMAINIPSGD 479

Query: 515 VGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGR 574
           + VIT  +GRKSMLKLAERMV+SFC GV ASTAH WTTLS TG+DDVRVMTRKS+DDPGR
Sbjct: 480 LCVITTAEGRKSMLKLAERMVMSFCTGVGASTAHAWTTLSATGSDDVRVMTRKSMDDPGR 539

Query: 575 PPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVS 634
           PPGIVLSAATSFW+PV  KR+FDFLRDEN RSEWDILSNGG VQEMAHIANGRD GNCVS
Sbjct: 540 PPGIVLSAATSFWIPVQSKRMFDFLRDENHRSEWDILSNGGEVQEMAHIANGRDPGNCVS 599

Query: 635 LLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
           LLRVN   SANSSQSNMLILQESCTD T S+VIYAPVDI AMN+VL+GGDPDYVALLPSG
Sbjct: 600 LLRVN---SANSSQSNMLILQESCTDSTGSYVIYAPVDISAMNIVLSGGDPDYVALLPSG 656

Query: 695 FAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERI 754
           FAILPDG     A I +  SGGSLLTVAFQILVDSVPTAKLSLGSVATVN+LI CTVERI
Sbjct: 657 FAILPDGPGYGSAGILDVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERI 716

Query: 755 KASLSCESA 763
           KA++ C++A
Sbjct: 717 KAAVMCDNA 725


>gi|255554965|ref|XP_002518520.1| homeobox protein, putative [Ricinus communis]
 gi|223542365|gb|EEF43907.1| homeobox protein, putative [Ricinus communis]
          Length = 727

 Score = 1145 bits (2961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 554/722 (76%), Positives = 625/722 (86%), Gaps = 8/722 (1%)

Query: 45  HPLDMTQNTSESEIARLREEEFD-STKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQ 101
           H  DMT  +SE+E+  L+++++D  TKSG+E  E  SGDDQ+  QRP KKKRYHRHTQ Q
Sbjct: 11  HMFDMTPKSSENELGNLKDDDYDHETKSGTETTEAPSGDDQDPNQRP-KKKRYHRHTQRQ 69

Query: 102 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTEN 161
           IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK QHER EN+ L+ EN
Sbjct: 70  IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERQENSILKAEN 129

Query: 162 EKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYV 221
           EKLRA+N RY+EALSNASCPNCGGP  +GE+SFDE HLR+ENARLREEIDR+S IAAKY+
Sbjct: 130 EKLRAENNRYKEALSNASCPNCGGPATLGEISFDEQHLRIENARLREEIDRLSGIAAKYI 189

Query: 222 GKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIE 281
           GKP+ +   LS  +PSR L+L V NFG Q G  G EMYGA D LRSI+ PTEA+KPMI+E
Sbjct: 190 GKPISSLSHLSSHLPSRSLDLGVSNFGTQSGYVG-EMYGATDFLRSITGPTEAEKPMIVE 248

Query: 282 LAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETA 341
           LAVAAMEEL+RMAQ G+PLW+   + T  VLNE+EY+R FPRGIGP+P G + EASRE+A
Sbjct: 249 LAVAAMEELMRMAQAGDPLWVPGENSTTEVLNEEEYLRAFPRGIGPRPLGLRSEASRESA 308

Query: 342 VVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSP 401
           VVIMNH++LVEILMDVNQWSTVF  IVSRAMTLE+LSTGVAGNYNGALQVMTAEFQVPSP
Sbjct: 309 VVIMNHVNLVEILMDVNQWSTVFCSIVSRAMTLEILSTGVAGNYNGALQVMTAEFQVPSP 368

Query: 402 LVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTW 461
           LVPTRE+Y+VRYCKQH +GTWAVVDVSLDNLRPSP  R RRR SGC+IQ++PNGYSKVTW
Sbjct: 369 LVPTRENYFVRYCKQHVDGTWAVVDVSLDNLRPSPIARSRRRLSGCVIQDLPNGYSKVTW 428

Query: 462 VEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQ 521
           +EH+EVDDR VH+LY+ L+++G AFGAKRWVA LDRQCERLAS MA NIP G++ VIT+ 
Sbjct: 429 IEHIEVDDRSVHSLYRPLINSGLAFGAKRWVAILDRQCERLASSMAINIPAGDLCVITSP 488

Query: 522 DGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLS 581
           +GRKSMLKLAERMV+SFC+GV ASTAH WTTLS TG+DDVRVMTRKS+DDPGRPPGIVL 
Sbjct: 489 EGRKSMLKLAERMVMSFCSGVGASTAHAWTTLSATGSDDVRVMTRKSMDDPGRPPGIVLC 548

Query: 582 AATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCL 641
           AATSFWLPVPPKRVF FL DEN RSEWDILSNGG V+EMAHIANGRD GNCVSLLRV   
Sbjct: 549 AATSFWLPVPPKRVFQFLSDENHRSEWDILSNGGQVEEMAHIANGRDPGNCVSLLRV--- 605

Query: 642 QSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG 701
            SANSSQSNML LQESCTD T S+VIYAPVDI AMN+VL+GGDPDYVALLPSGFAILPDG
Sbjct: 606 ISANSSQSNMLTLQESCTDSTGSYVIYAPVDIAAMNIVLSGGDPDYVALLPSGFAILPDG 665

Query: 702 TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
                  I +  SGG+L+TVAFQILVDS+PTAKLSLGSVATVNNLI CTVERIKA+++CE
Sbjct: 666 PGFSPGIILDVGSGGALVTVAFQILVDSIPTAKLSLGSVATVNNLIKCTVERIKAAVTCE 725

Query: 762 SA 763
           +A
Sbjct: 726 TA 727


>gi|18412734|ref|NP_567274.1| homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Arabidopsis
           thaliana]
 gi|75331628|sp|Q93V99.1|PDF2_ARATH RecName: Full=Homeobox-leucine zipper protein PROTODERMAL FACTOR 2;
           AltName: Full=HD-ZIP protein PDF2; AltName:
           Full=Homeodomain transcription factor PDF2
 gi|15983372|gb|AAL11554.1|AF424560_1 AT4g04890/T1J1_3 [Arabidopsis thaliana]
 gi|14276060|dbj|BAB58961.1| protodermal factor2 [Arabidopsis thaliana]
 gi|17064998|gb|AAL32653.1| Unknown protein [Arabidopsis thaliana]
 gi|23197872|gb|AAN15463.1| Unknown protein [Arabidopsis thaliana]
 gi|332657038|gb|AEE82438.1| homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Arabidopsis
           thaliana]
          Length = 743

 Score = 1132 bits (2928), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 558/742 (75%), Positives = 635/742 (85%), Gaps = 26/742 (3%)

Query: 38  NMMEGQLHPLDMT-QNTSESE--IARLREEEFDSTKSGSE----NHEGASGDDQEQRPNK 90
           NM E   H  DMT ++TS+++  I   RE++F+ TKSG+E    N  G    D  QRPNK
Sbjct: 5   NMFESH-HMFDMTPKSTSDNDLGITGSREDDFE-TKSGTEVTTENPSGEELQDPSQRPNK 62

Query: 91  KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           KKRYHRHTQ QIQE+E+FFKECPHPDDKQRKELSR+L LEPLQVKFWFQNKRTQMK Q E
Sbjct: 63  KKRYHRHTQRQIQELESFFKECPHPDDKQRKELSRDLNLEPLQVKFWFQNKRTQMKAQSE 122

Query: 151 RHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEI 210
           RHEN  L+++N+KLRA+N RY+EALSNA+CPNCGGP AIGEMSFDE HLR+ENARLREEI
Sbjct: 123 RHENQILKSDNDKLRAENNRYKEALSNATCPNCGGPAAIGEMSFDEQHLRIENARLREEI 182

Query: 211 DRISAIAAKYVGKPV-VNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSIS 269
           DRISAIAAKYVGKP+  ++  L+   PSR L+L VGNFG Q G   GEMYG  D+LRS+S
Sbjct: 183 DRISAIAAKYVGKPLGSSFAPLAIHAPSRSLDLEVGNFGNQTGF-VGEMYGTGDILRSVS 241

Query: 270 APTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKP 329
            P+E DKP+I+ELAVAAMEEL+RMAQ G+PLW+ S D +  +LNE+EY RTFPRGIGPKP
Sbjct: 242 IPSETDKPIIVELAVAAMEELVRMAQTGDPLWL-STDNSVEILNEEEYFRTFPRGIGPKP 300

Query: 330 TGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGAL 389
            G + EASR++AVVIMNHI+LVEILMDVNQWS VFSGIVSRA+TLEVLSTGVAGNYNGAL
Sbjct: 301 LGLRSEASRQSAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGVAGNYNGAL 360

Query: 390 QVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPS-PAVRCRRRPSGCL 448
           QVMTAEFQVPSPLVPTRE+Y+VRYCKQH +G+WAVVDVSLD+LRPS P +R RRRPSGCL
Sbjct: 361 QVMTAEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLRPSTPILRTRRRPSGCL 420

Query: 449 IQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMAT 508
           IQE+PNGYSKVTW+EH+EVDDR VHN+YK LV +G AFGAKRWVATL+RQCERLAS MA+
Sbjct: 421 IQELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMAS 480

Query: 509 NIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKS 568
           NIP G++ VIT+ +GRKSMLKLAERMV+SFC+GV ASTAH WTT+S TG+DDVRVMTRKS
Sbjct: 481 NIP-GDLSVITSPEGRKSMLKLAERMVMSFCSGVGASTAHAWTTMSTTGSDDVRVMTRKS 539

Query: 569 VDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRD 628
           +DDPGRPPGIVLSAATSFW+PV PKRVFDFLRDEN+R EWDILSNGG+VQEMAHIANG +
Sbjct: 540 MDDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRKEWDILSNGGMVQEMAHIANGHE 599

Query: 629 TGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYV 688
            GNCVSLLRVN   S NSSQSNMLILQESCTD + S+VIYAPVDIVAMNVVL+GGDPDYV
Sbjct: 600 PGNCVSLLRVN---SGNSSQSNMLILQESCTDASGSYVIYAPVDIVAMNVVLSGGDPDYV 656

Query: 689 ALLPSGFAILPDGTSLHG---------ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGS 739
           ALLPSGFAILPDG+   G         +     + GGSLLTVAFQILVDSVPTAKLSLGS
Sbjct: 657 ALLPSGFAILPDGSVGGGDGNQHQEMVSTTSSGSCGGSLLTVAFQILVDSVPTAKLSLGS 716

Query: 740 VATVNNLIACTVERIKASLSCE 761
           VATVN+LI CTVERIKA++SC+
Sbjct: 717 VATVNSLIKCTVERIKAAVSCD 738


>gi|224116084|ref|XP_002317205.1| predicted protein [Populus trichocarpa]
 gi|222860270|gb|EEE97817.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score = 1132 bits (2927), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 547/721 (75%), Positives = 623/721 (86%), Gaps = 10/721 (1%)

Query: 45  HPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQE---QRPNKKKRYHRHTQHQ 101
           H LDMT  +SE+++++L++++++ TKSG+E  E  SGDDQ+   QRP KKKRYHRHTQ Q
Sbjct: 6   HMLDMTPKSSENDLSKLKDDDYE-TKSGTETMEAPSGDDQDPSGQRP-KKKRYHRHTQRQ 63

Query: 102 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTEN 161
           IQEMEAFF+ECPHPDDKQRKELSRELGL+PLQVKFWFQNKRTQMK QHER EN+ L+ EN
Sbjct: 64  IQEMEAFFQECPHPDDKQRKELSRELGLDPLQVKFWFQNKRTQMKAQHERSENSILKAEN 123

Query: 162 EKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYV 221
           EKLR +N RY+EALS+ASCPNCGGP A+GEMSFDE HLR+ENARLREEIDRIS IAAKYV
Sbjct: 124 EKLRMENNRYKEALSSASCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYV 183

Query: 222 GKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIE 281
           GKP+ +   LS  +PSR L+L V N+GA  G  G EM+GA  LL +++ PTEADKPMI+E
Sbjct: 184 GKPLSSLSNLSHHLPSRSLDLGVSNYGAHSGFVG-EMFGATALLGAVTGPTEADKPMIVE 242

Query: 282 LAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETA 341
           +AVAAMEEL+RMAQ GEPLW+   + T  VLNE+EY+RTF RGIGP+P G + EASRE+A
Sbjct: 243 VAVAAMEELMRMAQAGEPLWIQGENNTE-VLNEEEYLRTFTRGIGPRPLGMRSEASRESA 301

Query: 342 VVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSP 401
           VVIM+H++LVEILMD NQWST+F GIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSP
Sbjct: 302 VVIMSHVNLVEILMDANQWSTIFCGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSP 361

Query: 402 LVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTW 461
           LVPTRE+Y+VRYCKQH + TWAVVDVSLD+L PS   +CRRR SGCLIQE+PNGYS V W
Sbjct: 362 LVPTRENYFVRYCKQHTDATWAVVDVSLDSLCPSLMSKCRRRSSGCLIQELPNGYSNVVW 421

Query: 462 VEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQ 521
           VEH EVDDR VHN+Y+ LV++G AFGAKRWV TLDRQCERLAS MA NIPTG++ VIT  
Sbjct: 422 VEHTEVDDRSVHNIYRPLVNSGLAFGAKRWVGTLDRQCERLASSMAINIPTGDLCVITTP 481

Query: 522 DGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLS 581
           +GRKS+LKLAERMV+SFC GV ASTAHTWTTLS TG+DDVRVMTRKS+DDPGRPPGIVLS
Sbjct: 482 EGRKSILKLAERMVMSFCTGVGASTAHTWTTLSATGSDDVRVMTRKSMDDPGRPPGIVLS 541

Query: 582 AATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCL 641
           AATSFW+PVP K+VFDFL+DEN RSEWDILSNGG VQEMAHIANGRD GNCVSLLRVN  
Sbjct: 542 AATSFWIPVPSKKVFDFLKDENHRSEWDILSNGGQVQEMAHIANGRDPGNCVSLLRVN-- 599

Query: 642 QSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG 701
            S NSSQSNMLILQESCTD T S+VIYAPVDI AMN+VL+GGDPDYVALLPSGFAILPDG
Sbjct: 600 -STNSSQSNMLILQESCTDSTGSYVIYAPVDISAMNIVLSGGDPDYVALLPSGFAILPDG 658

Query: 702 TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
                A I +  SGGSLLTVAFQILVDSVP+ KLSLGSVATVN+LI CTVERIKA++ C+
Sbjct: 659 PGYGPAGILDVGSGGSLLTVAFQILVDSVPSVKLSLGSVATVNSLIKCTVERIKAAVMCD 718

Query: 762 S 762
           +
Sbjct: 719 N 719


>gi|7267248|emb|CAB81031.1| putative homeotic protein [Arabidopsis thaliana]
          Length = 738

 Score = 1130 bits (2924), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/735 (75%), Positives = 632/735 (85%), Gaps = 25/735 (3%)

Query: 45  HPLDMT-QNTSESE--IARLREEEFDSTKSGSE----NHEGASGDDQEQRPNKKKRYHRH 97
           H  DMT ++TS+++  I   RE++F+ TKSG+E    N  G    D  QRPNKKKRYHRH
Sbjct: 6   HMFDMTPKSTSDNDLGITGSREDDFE-TKSGTEVTTENPSGEELQDPSQRPNKKKRYHRH 64

Query: 98  TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           TQ QIQE+E+FFKECPHPDDKQRKELSR+L LEPLQVKFWFQNKRTQMK Q ERHEN  L
Sbjct: 65  TQRQIQELESFFKECPHPDDKQRKELSRDLNLEPLQVKFWFQNKRTQMKAQSERHENQIL 124

Query: 158 RTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIA 217
           +++N+KLRA+N RY+EALSNA+CPNCGGP AIGEMSFDE HLR+ENARLREEIDRISAIA
Sbjct: 125 KSDNDKLRAENNRYKEALSNATCPNCGGPAAIGEMSFDEQHLRIENARLREEIDRISAIA 184

Query: 218 AKYVGKPV-VNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADK 276
           AKYVGKP+  ++  L+   PSR L+L VGNFG Q G   GEMYG  D+LRS+S P+E DK
Sbjct: 185 AKYVGKPLGSSFAPLAIHAPSRSLDLEVGNFGNQTGF-VGEMYGTGDILRSVSIPSETDK 243

Query: 277 PMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEA 336
           P+I+ELAVAAMEEL+RMAQ G+PLW+ S D +  +LNE+EY RTFPRGIGPKP G + EA
Sbjct: 244 PIIVELAVAAMEELVRMAQTGDPLWL-STDNSVEILNEEEYFRTFPRGIGPKPLGLRSEA 302

Query: 337 SRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEF 396
           SR++AVVIMNHI+LVEILMDVNQWS VFSGIVSRA+TLEVLSTGVAGNYNGALQVMTAEF
Sbjct: 303 SRQSAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGVAGNYNGALQVMTAEF 362

Query: 397 QVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPS-PAVRCRRRPSGCLIQEMPNG 455
           QVPSPLVPTRE+Y+VRYCKQH +G+WAVVDVSLD+LRPS P +R RRRPSGCLIQE+PNG
Sbjct: 363 QVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLRPSTPILRTRRRPSGCLIQELPNG 422

Query: 456 YSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEV 515
           YSKVTW+EH+EVDDR VHN+YK LV +G AFGAKRWVATL+RQCERLAS MA+NIP G++
Sbjct: 423 YSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMASNIP-GDL 481

Query: 516 GVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRP 575
            VIT+ +GRKSMLKLAERMV+SFC+GV ASTAH WTT+S TG+DDVRVMTRKS+DDPGRP
Sbjct: 482 SVITSPEGRKSMLKLAERMVMSFCSGVGASTAHAWTTMSTTGSDDVRVMTRKSMDDPGRP 541

Query: 576 PGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSL 635
           PGIVLSAATSFW+PV PKRVFDFLRDEN+R EWDILSNGG+VQEMAHIANG + GNCVSL
Sbjct: 542 PGIVLSAATSFWIPVAPKRVFDFLRDENSRKEWDILSNGGMVQEMAHIANGHEPGNCVSL 601

Query: 636 LRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGF 695
           LRVN   S NSSQSNMLILQESCTD + S+VIYAPVDIVAMNVVL+GGDPDYVALLPSGF
Sbjct: 602 LRVN---SGNSSQSNMLILQESCTDASGSYVIYAPVDIVAMNVVLSGGDPDYVALLPSGF 658

Query: 696 AILPDGTSLHG---------ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNL 746
           AILPDG+   G         +     + GGSLLTVAFQILVDSVPTAKLSLGSVATVN+L
Sbjct: 659 AILPDGSVGGGDGNQHQEMVSTTSSGSCGGSLLTVAFQILVDSVPTAKLSLGSVATVNSL 718

Query: 747 IACTVERIKASLSCE 761
           I CTVERIKA++SC+
Sbjct: 719 IKCTVERIKAAVSCD 733


>gi|115460702|ref|NP_001053951.1| Os04g0627000 [Oryza sativa Japonica Group]
 gi|122240821|sp|Q0J9X2.1|ROC2_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC2; AltName:
           Full=GLABRA 2-like homeobox protein 2; AltName:
           Full=HD-ZIP protein ROC2; AltName: Full=Homeodomain
           transcription factor ROC2; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 2
 gi|113565522|dbj|BAF15865.1| Os04g0627000 [Oryza sativa Japonica Group]
          Length = 784

 Score = 1129 bits (2920), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/796 (72%), Positives = 661/796 (83%), Gaps = 53/796 (6%)

Query: 5   VMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQ---------------LHPLDM 49
           +MIPAR+MPS IGRNG     GSSS L+LSQP N+++                 L  +  
Sbjct: 1   MMIPARHMPSMIGRNG--AAYGSSSALSLSQP-NLLDNHQFQQAFQHQQQQHHLLDQIPA 57

Query: 50  TQNTSESEIARLRE------EEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQ 101
           T   S   + R R       +EF+S KSGSEN +G S DDQ+  QRP +KKRYHRHTQHQ
Sbjct: 58  TTAESGDNMIRSRASDPLGGDEFES-KSGSENVDGVSVDDQDPNQRP-RKKRYHRHTQHQ 115

Query: 102 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTEN 161
           IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK QHERHEN+QLR++N
Sbjct: 116 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDN 175

Query: 162 EKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYV 221
           EKLRA+NMRY+EALS+ASCPNCGGP A+GEMSFDEHHLR+ENARLREEIDRISAIAAKYV
Sbjct: 176 EKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYV 235

Query: 222 GKPVVNYPLLSPPVPSR----PLELAVGNFGAQPGIGGGEMYGAA---DLLRSISAPTEA 274
           GKP+V +P+LS P+ +     PL+L V  +G       G+M+G     +LLR +   +E 
Sbjct: 236 GKPMVPFPVLSNPMAAAASRAPLDLPVAPYGVP-----GDMFGGGGAGELLRGVQ--SEV 288

Query: 275 DKPMIIELAVAAMEELIRMAQMGEPLWMTS--LDGTAA---VLNEDEYVRTFPRGIGPKP 329
           DKPMI+ELAVAAMEEL+RMAQ+ EPLW  +  LD TAA    L+E+EY R FPRG+GPK 
Sbjct: 289 DKPMIVELAVAAMEELVRMAQLDEPLWSVAPPLDATAAAMETLSEEEYARMFPRGLGPKQ 348

Query: 330 TGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGAL 389
            G + EASR++AVVIM H +LVEILMD NQ++ VFS IVSRA+TLEVLSTGVAGNYNGAL
Sbjct: 349 YGLRSEASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGAL 408

Query: 390 QVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLI 449
           QVM+ EFQVPSPLVPTRESY+VRYCKQ+ +GTWAVVDVSLD+LRPSP ++CRRRPSGCLI
Sbjct: 409 QVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSPVLKCRRRPSGCLI 468

Query: 450 QEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATN 509
           QEMPNGYSKVTWVEHVEVDDR VHN+YK LV++G AFGA+RWV TLDRQCERLASVMA+N
Sbjct: 469 QEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASN 528

Query: 510 IPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSV 569
           IPT ++GVIT+ +GRKSMLKLAERMV+SFC GV+AS AH WTTLSG+GA+DVRVMTRKSV
Sbjct: 529 IPTSDIGVITSSEGRKSMLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSV 588

Query: 570 DDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDT 629
           DDPGRPPGIVL+AATSFWLPVPPKRVFDFLRDE++RSEWDILSNGG+VQEMAHIANGRD 
Sbjct: 589 DDPGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRSEWDILSNGGIVQEMAHIANGRDQ 648

Query: 630 GNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVA 689
           GNCVSLLRV    S+NS+QSNMLILQESCTD + S+VIYAPVD+VAMNVVLNGGDPDYVA
Sbjct: 649 GNCVSLLRV---NSSNSNQSNMLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVA 705

Query: 690 LLPSGFAILPDGTS---LHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNL 746
           LLPSGFAILPDG +     G       SGGSLLTVAFQILVDSVPTAKLSLGSVATVN+L
Sbjct: 706 LLPSGFAILPDGPAHDGGDGDGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSL 765

Query: 747 IACTVERIKASLSCES 762
           IACTVERIKA++S ES
Sbjct: 766 IACTVERIKAAVSGES 781


>gi|312282177|dbj|BAJ33954.1| unnamed protein product [Thellungiella halophila]
          Length = 749

 Score = 1127 bits (2916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 556/744 (74%), Positives = 635/744 (85%), Gaps = 27/744 (3%)

Query: 38  NMMEGQLHPLDMT-QNTSESE--IARLREEEFDSTKSGSE----NHEGASGDDQEQRPNK 90
           NM E   H  DMT ++TS+++  I   RE++F+ TKSG+E    N  G    D  QRPNK
Sbjct: 5   NMFESH-HMFDMTPKSTSDNDLGITGSREDDFE-TKSGTEVTTENPSGEELQDPNQRPNK 62

Query: 91  KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           KKRYHRHTQ QIQE+E+FFKECPHPDDKQRKELSR+LGLEPLQVKFWFQNKRTQMK QHE
Sbjct: 63  KKRYHRHTQRQIQELESFFKECPHPDDKQRKELSRDLGLEPLQVKFWFQNKRTQMKAQHE 122

Query: 151 RHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEI 210
           RHEN  L+++N+KLRA+N RY+EALSNA+CPNCGGP AIGEMSFDE HLR+ENARLREEI
Sbjct: 123 RHENQILKSDNDKLRAENNRYKEALSNATCPNCGGPAAIGEMSFDEQHLRIENARLREEI 182

Query: 211 DRISAIAAKYVGKPV---VNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
           DRISAIAAKYVGKP+      PL +   PSR L+L VGNFG Q G  G EMYG  D+LRS
Sbjct: 183 DRISAIAAKYVGKPLGSSFGAPL-AIHAPSRSLDLEVGNFGNQAGFVG-EMYGTGDILRS 240

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
           +S P+E DKPMI+ELAVAAMEEL+RMAQ  +PLW+++ + +  +LNE+EY RTFPRGIGP
Sbjct: 241 VSIPSETDKPMIVELAVAAMEELVRMAQAVDPLWVSTDNNSIEILNEEEYFRTFPRGIGP 300

Query: 328 KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNG 387
           KP G + EASRE+AVVIMNHI+LVEILMDVNQWS VFSGIVSRA+TLEVLSTGVAGNYNG
Sbjct: 301 KPLGLRSEASRESAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGVAGNYNG 360

Query: 388 ALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGC 447
           ALQVMTAEFQVPSPLVPTRE+Y+VRYCKQH +G+WAVVDVSLD+LRP+P  R RRRPSGC
Sbjct: 361 ALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLRPNPISRTRRRPSGC 420

Query: 448 LIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMA 507
           LIQE+PNGYSKVTW+EH+EVDDR VH +YK LV +G AFGAKRWV+TL+RQCERLAS MA
Sbjct: 421 LIQELPNGYSKVTWIEHMEVDDRSVHTMYKPLVHSGLAFGAKRWVSTLERQCERLASSMA 480

Query: 508 TNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRK 567
           +NIP G++ VIT+ +GRKSMLKLAERMV+SFC+GV ASTAH WTT+S TG+DDVRVMTRK
Sbjct: 481 SNIPAGDLSVITSPEGRKSMLKLAERMVMSFCSGVGASTAHAWTTMSSTGSDDVRVMTRK 540

Query: 568 SVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGR 627
           S+DDPGRPPGIVLSAATSFW+PV PKRVFDFLRDEN+RSEWDILSNGG+VQEMAHIANGR
Sbjct: 541 SMDDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSEWDILSNGGMVQEMAHIANGR 600

Query: 628 DTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDY 687
           + GNCVSLLRVN   S NSSQSNMLILQESCTD + S+VIYAPVDIVAMNVVL+GGDPDY
Sbjct: 601 EPGNCVSLLRVN---SGNSSQSNMLILQESCTDASGSYVIYAPVDIVAMNVVLSGGDPDY 657

Query: 688 VALLPSGFAILPD----------GTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSL 737
           VALLPSGFAILPD             +  ++   + S GSLLTVAFQILVDSVPTAKLSL
Sbjct: 658 VALLPSGFAILPDGSVGGGTGDGNQEVVSSSSSSSGSCGSLLTVAFQILVDSVPTAKLSL 717

Query: 738 GSVATVNNLIACTVERIKASLSCE 761
           GSVATVN+LI CTVERIKA+++C+
Sbjct: 718 GSVATVNSLIKCTVERIKAAVACD 741


>gi|22328861|ref|NP_193906.2| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
 gi|79325215|ref|NP_001031692.1| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
 gi|75330714|sp|Q8RWU4.1|ATML1_ARATH RecName: Full=Homeobox-leucine zipper protein MERISTEM L1; AltName:
           Full=HD-ZIP protein ATML1; AltName: Full=Homeodomain
           transcription factor ATML1
 gi|20268701|gb|AAM14054.1| putative L1-specific homeobox gene ATML1/ovule-specific homeobox
           protein A20 [Arabidopsis thaliana]
 gi|23297714|gb|AAN12908.1| putative L1-specific homeobox gene ATML1/ovule-specific homeobox
           protein A20 [Arabidopsis thaliana]
 gi|110739777|dbj|BAF01795.1| L1 specific homeobox gene ATML1/ovule-specific homeobox protein A20
           [Arabidopsis thaliana]
 gi|332659098|gb|AEE84498.1| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
 gi|332659099|gb|AEE84499.1| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
          Length = 762

 Score = 1127 bits (2915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 561/764 (73%), Positives = 632/764 (82%), Gaps = 44/764 (5%)

Query: 38  NMMEGQLHPLDMTQNTSESE--IARLREEEFDSTKSGSE----NHEGASGDDQEQRPNKK 91
           NM E   H  DMT   SE++  I    EE+F+ TKSG+E    N       D  QRPNKK
Sbjct: 5   NMFESHHHMFDMTPKNSENDLGITGSHEEDFE-TKSGAEVTMENPLEEELQDPNQRPNKK 63

Query: 92  KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
           KRYHRHTQ QIQE+E+FFKECPHPDDKQRKELSREL LEPLQVKFWFQNKRTQMK QHER
Sbjct: 64  KRYHRHTQRQIQELESFFKECPHPDDKQRKELSRELSLEPLQVKFWFQNKRTQMKAQHER 123

Query: 152 HENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEID 211
           HEN  L++EN+KLRA+N RY++ALSNA+CPNCGGP AIGEMSFDE HLR+ENARLREEID
Sbjct: 124 HENQILKSENDKLRAENNRYKDALSNATCPNCGGPAAIGEMSFDEQHLRIENARLREEID 183

Query: 212 RISAIAAKYVGKPVV------NYPLLSPPVPSRPLELAVGNFG----AQPGIGGGEMYGA 261
           RISAIAAKYVGKP++           S  +PSR L+L VGNFG    +  G  G EM+G+
Sbjct: 184 RISAIAAKYVGKPLMANSSSFPQLSSSHHIPSRSLDLEVGNFGNNNNSHTGFVG-EMFGS 242

Query: 262 ADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF 321
           +D+LRS+S P+EADKPMI+ELAVAAMEEL+RMAQ G+PLW++S D +  +LNE+EY RTF
Sbjct: 243 SDILRSVSIPSEADKPMIVELAVAAMEELVRMAQTGDPLWVSS-DNSVEILNEEEYFRTF 301

Query: 322 PRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGV 381
           PRGIGPKP G + EASRE+ VVIMNHI+L+EILMDVNQWS+VF GIVSRA+TLEVLSTGV
Sbjct: 302 PRGIGPKPIGLRSEASRESTVVIMNHINLIEILMDVNQWSSVFCGIVSRALTLEVLSTGV 361

Query: 382 AGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCR 441
           AGNYNGALQVMTAEFQVPSPLVPTRE+Y+VRYCKQH +G WAVVDVSLD+LRPSP  R R
Sbjct: 362 AGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPSPITRSR 421

Query: 442 RRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCER 501
           RRPSGCLIQE+ NGYSKVTWVEH+EVDDR VHN+YK LV+TG AFGAKRWVATLDRQCER
Sbjct: 422 RRPSGCLIQELQNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCER 481

Query: 502 LASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV 561
           LAS MA+NIP  ++ VIT+ +GRKSMLKLAERMV+SFC GV ASTAH WTTLS TG+DDV
Sbjct: 482 LASSMASNIPACDLSVITSPEGRKSMLKLAERMVMSFCTGVGASTAHAWTTLSTTGSDDV 541

Query: 562 RVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMA 621
           RVMTRKS+DDPGRPPGIVLSAATSFW+PV PKRVFDFLRDEN+RSEWDILSNGG+VQEMA
Sbjct: 542 RVMTRKSMDDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSEWDILSNGGLVQEMA 601

Query: 622 HIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLN 681
           HIANGRD GN VSLLRVN   S NS QSNMLILQESCTD + S+VIYAPVDI+AMNVVL+
Sbjct: 602 HIANGRDPGNSVSLLRVN---SGNSGQSNMLILQESCTDASGSYVIYAPVDIIAMNVVLS 658

Query: 682 GGDPDYVALLPSGFAILPDGTSLHGANIGEAAS----------------------GGSLL 719
           GGDPDYVALLPSGFAILPDG++  G     A++                      GGSLL
Sbjct: 659 GGDPDYVALLPSGFAILPDGSARGGGGSANASAGAGVEGGGEGNNLEVVTTTGSCGGSLL 718

Query: 720 TVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
           TVAFQILVDSVPTAKLSLGSVATVN+LI CTVERIKA+L+C+ A
Sbjct: 719 TVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAALACDGA 762


>gi|218195634|gb|EEC78061.1| hypothetical protein OsI_17520 [Oryza sativa Indica Group]
          Length = 784

 Score = 1120 bits (2897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 579/796 (72%), Positives = 660/796 (82%), Gaps = 53/796 (6%)

Query: 5   VMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQ---------------LHPLDM 49
           +MIPAR+MPS IGRNG     GSSS L+LSQP N+++                 L  +  
Sbjct: 1   MMIPARHMPSMIGRNG--AAYGSSSALSLSQP-NLLDNHQFQQAFQHQQQQHHLLDQIPA 57

Query: 50  TQNTSESEIARLRE------EEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQ 101
           T   S   + R R       +EF+S KSGSEN +G S DDQ+  QRP +KKRYHRHTQHQ
Sbjct: 58  TTAESGDNMIRSRASDPLGGDEFES-KSGSENVDGVSVDDQDPNQRP-RKKRYHRHTQHQ 115

Query: 102 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTEN 161
           IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK QHERHEN+QLR++N
Sbjct: 116 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDN 175

Query: 162 EKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYV 221
           EKLRA+NMRY+EALS+ASCPNCGGP A+GEMSFDEHHLR+ENARLREEIDRISAIAAKYV
Sbjct: 176 EKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYV 235

Query: 222 GKPVVNYPLLSPPVPSR----PLELAVGNFGAQPGIGGGEMYGAA---DLLRSISAPTEA 274
           GKP+V +P+LS P+ +     PL+L V  +G       G+M+G     +LLR +   +E 
Sbjct: 236 GKPMVPFPVLSNPMAAAASRAPLDLPVAPYGVP-----GDMFGGGGAGELLRGVQ--SEV 288

Query: 275 DKPMIIELAVAAMEELIRMAQMGEPLWMTS--LDGTAA---VLNEDEYVRTFPRGIGPKP 329
           DKPMI++LAVAAMEEL+RMAQ+ EPLW  +  LD  AA    L+E+EY R FPRG+GPK 
Sbjct: 289 DKPMIVDLAVAAMEELVRMAQLDEPLWSVAPPLDAAAAAMETLSEEEYARMFPRGLGPKQ 348

Query: 330 TGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGAL 389
            G + EASR++AVVIM H +LVEILMD NQ++ VFS IVSRA+TLEVLSTGVAGNYNGAL
Sbjct: 349 YGLRSEASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAVTLEVLSTGVAGNYNGAL 408

Query: 390 QVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLI 449
           QVM+ EFQVPSPLVPTRESY+VRYCKQ+ +GTWAVVDVSLD+LRPSP ++CRRRPSGCLI
Sbjct: 409 QVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSPVLKCRRRPSGCLI 468

Query: 450 QEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATN 509
           QEMPNGYSKVTWVEHVEVDDR VHN+YK LV++G AFGA+RWV TLDRQCERLASVMA+N
Sbjct: 469 QEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASN 528

Query: 510 IPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSV 569
           IPT ++GVIT+ +GRKSMLKLAERMV+SFC GV+AS AH WTTLSG+GA+DVRVMTRKSV
Sbjct: 529 IPTSDIGVITSSEGRKSMLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSV 588

Query: 570 DDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDT 629
           DDPGRPPGIVL+AATSFWLPVPPKRVFDFLRDE++RSEWDILSNGG+VQEMAHIANGRD 
Sbjct: 589 DDPGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRSEWDILSNGGIVQEMAHIANGRDQ 648

Query: 630 GNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVA 689
           GNCVSLLRV    S+NS+QSNMLILQESCTD + S+VIYAPVD+VAMNVVLNGGDPDYVA
Sbjct: 649 GNCVSLLRV---NSSNSNQSNMLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVA 705

Query: 690 LLPSGFAILPDGTS---LHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNL 746
           LLPSGFAILPDG +     G       SGGSLLTVAFQILVDSVPTAKLSLGSVATVN+L
Sbjct: 706 LLPSGFAILPDGPAHDGGDGDGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSL 765

Query: 747 IACTVERIKASLSCES 762
           IACTVERIKA++S ES
Sbjct: 766 IACTVERIKAAVSGES 781


>gi|31339097|dbj|BAC77155.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 783

 Score = 1118 bits (2891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 577/795 (72%), Positives = 656/795 (82%), Gaps = 53/795 (6%)

Query: 6   MIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQ---------------LHPLDMT 50
           MIPAR+MPS IGRNG     GSSS L+LSQP N+++                 L  +  T
Sbjct: 1   MIPARHMPSMIGRNG--AAYGSSSALSLSQP-NLLDNHQFQQAFQHQQQQHHLLDQIPAT 57

Query: 51  QNTSESEIARLRE------EEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQI 102
              S   + R R       +EF+S KSGSEN +G S DDQ+  QRP +KKRYHRHTQHQI
Sbjct: 58  TAESGDNMIRSRASDPLGGDEFES-KSGSENVDGVSVDDQDPNQRP-RKKRYHRHTQHQI 115

Query: 103 QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENE 162
           QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK QHERHEN+QLR++NE
Sbjct: 116 QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNE 175

Query: 163 KLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVG 222
           KLRA+NMRY+EALS+ASCPNCGGP A+GEMSFDEHHLR+ENARLREEIDRISAIAAKYVG
Sbjct: 176 KLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVG 235

Query: 223 KPVVNYPLLSPPVPSR----PLELAVGNFGAQPGIGGGEMYGAA---DLLRSISAPTEAD 275
           KP+V +P+LS P+ +     PL+L V  +G       G+M+G     +LLR +   +E D
Sbjct: 236 KPMVPFPVLSNPMAAAASRAPLDLPVAPYGVP-----GDMFGGGGAGELLRGVQ--SEVD 288

Query: 276 KPMIIELAVAAMEELIRMAQMGEPLWMTS--LDGTAA---VLNEDEYVRTFPRGIGPKPT 330
           KPMI+ELAV AMEEL+RMAQ+ EPLW  +  LD TAA    L+E+EY R FPRG+GPK  
Sbjct: 289 KPMIVELAVPAMEELVRMAQLDEPLWSVAPPLDATAAAMETLSEEEYARMFPRGLGPKQY 348

Query: 331 GFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ 390
           G + EASR++AVVIM H +LVEILMD NQ++ VFS IVSRA+TLEVLSTGVAGNYNGALQ
Sbjct: 349 GLRSEASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGALQ 408

Query: 391 VMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQ 450
           VM+ EFQVPSPLVPTRESY+VRYCKQ+ +GTWAVVDVSLD+LRPSP ++CRRRPSGCLIQ
Sbjct: 409 VMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSPVLKCRRRPSGCLIQ 468

Query: 451 EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI 510
           EMPNGYSKVTWVEHVEVDDR VHN+YK LV++G AFGA+RWV TLDRQCERLASVMA+NI
Sbjct: 469 EMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNI 528

Query: 511 PTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 570
           PT ++GVIT+ +GRKSMLKLAERMV+SFC GV+AS AH WTTLSG+GA+DVRVMTRKSVD
Sbjct: 529 PTSDIGVITSSEGRKSMLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVD 588

Query: 571 DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTG 630
           DPGRPPGIVL+A TSFWLPVP KRVF FLRDE++RSEWDILSNGG+VQEMAHIANGRD G
Sbjct: 589 DPGRPPGIVLNAVTSFWLPVPSKRVFHFLRDESSRSEWDILSNGGIVQEMAHIANGRDQG 648

Query: 631 NCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVAL 690
           NCVSLLRV    S+NS+QSNMLILQESCTD + S+VIYAPVD+VAMNVVLNGGDPDYVAL
Sbjct: 649 NCVSLLRV---NSSNSNQSNMLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVAL 705

Query: 691 LPSGFAILPDGTS---LHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLI 747
           LPSGFAILPDG +     G       SGGSLLTVAFQILVDSVPTAKLSLGSVATVN+LI
Sbjct: 706 LPSGFAILPDGPAHDGGDGDGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLI 765

Query: 748 ACTVERIKASLSCES 762
           ACTVERIKA++S ES
Sbjct: 766 ACTVERIKAAVSGES 780


>gi|4455283|emb|CAB36819.1| L1 specific homeobox gene ATML1/ovule-specific homeobox protein A20
           [Arabidopsis thaliana]
 gi|7268972|emb|CAB81282.1| L1 specific homeobox gene ATML1/ovule-specific homeobox protein A20
           [Arabidopsis thaliana]
          Length = 718

 Score = 1111 bits (2874), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/713 (76%), Positives = 608/713 (85%), Gaps = 37/713 (5%)

Query: 83  DQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKR 142
           D  QRPNKKKRYHRHTQ QIQE+E+FFKECPHPDDKQRKELSREL LEPLQVKFWFQNKR
Sbjct: 11  DPNQRPNKKKRYHRHTQRQIQELESFFKECPHPDDKQRKELSRELSLEPLQVKFWFQNKR 70

Query: 143 TQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLE 202
           TQMK QHERHEN  L++EN+KLRA+N RY++ALSNA+CPNCGGP AIGEMSFDE HLR+E
Sbjct: 71  TQMKAQHERHENQILKSENDKLRAENNRYKDALSNATCPNCGGPAAIGEMSFDEQHLRIE 130

Query: 203 NARLREEIDRISAIAAKYVGKPVV------NYPLLSPPVPSRPLELAVGNFG----AQPG 252
           NARLREEIDRISAIAAKYVGKP++           S  +PSR L+L VGNFG    +  G
Sbjct: 131 NARLREEIDRISAIAAKYVGKPLMANSSSFPQLSSSHHIPSRSLDLEVGNFGNNNNSHTG 190

Query: 253 IGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVL 312
             G EM+G++D+LRS+S P+EADKPMI+ELAVAAMEEL+RMAQ G+PLW++S D +  +L
Sbjct: 191 FVG-EMFGSSDILRSVSIPSEADKPMIVELAVAAMEELVRMAQTGDPLWVSS-DNSVEIL 248

Query: 313 NEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAM 372
           NE+EY RTFPRGIGPKP G + EASRE+ VVIMNHI+L+EILMDVNQWS+VF GIVSRA+
Sbjct: 249 NEEEYFRTFPRGIGPKPIGLRSEASRESTVVIMNHINLIEILMDVNQWSSVFCGIVSRAL 308

Query: 373 TLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL 432
           TLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE+Y+VRYCKQH +G WAVVDVSLD+L
Sbjct: 309 TLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSL 368

Query: 433 RPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
           RPSP  R RRRPSGCLIQE+ NGYSKVTWVEH+EVDDR VHN+YK LV+TG AFGAKRWV
Sbjct: 369 RPSPITRSRRRPSGCLIQELQNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWV 428

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTT 552
           ATLDRQCERLAS MA+NIP  ++ VIT+ +GRKSMLKLAERMV+SFC GV ASTAH WTT
Sbjct: 429 ATLDRQCERLASSMASNIPACDLSVITSPEGRKSMLKLAERMVMSFCTGVGASTAHAWTT 488

Query: 553 LSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILS 612
           LS TG+DDVRVMTRKS+DDPGRPPGIVLSAATSFW+PV PKRVFDFLRDEN+RSEWDILS
Sbjct: 489 LSTTGSDDVRVMTRKSMDDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSEWDILS 548

Query: 613 NGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVD 672
           NGG+VQEMAHIANGRD GN VSLLRVN   S NS QSNMLILQESCTD + S+VIYAPVD
Sbjct: 549 NGGLVQEMAHIANGRDPGNSVSLLRVN---SGNSGQSNMLILQESCTDASGSYVIYAPVD 605

Query: 673 IVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAAS------------------ 714
           I+AMNVVL+GGDPDYVALLPSGFAILPDG++  G     A++                  
Sbjct: 606 IIAMNVVLSGGDPDYVALLPSGFAILPDGSARGGGGSANASAGAGVEGGGEGNNLEVVTT 665

Query: 715 ----GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
               GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LI CTVERIKA+L+C+ A
Sbjct: 666 TGSCGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAALACDGA 718


>gi|4325343|gb|AAD17342.1| contains similarity to homeobox domains (Pfam: PF00046, Score,36.5,
           E=6.9e-08, N=1) [Arabidopsis thaliana]
          Length = 772

 Score = 1109 bits (2869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 554/768 (72%), Positives = 630/768 (82%), Gaps = 57/768 (7%)

Query: 45  HPLDMT-QNTSESE--IARLREEEFDSTKSGSE----NHEGASGDDQEQRPNKKKRYHRH 97
           H  DMT ++TS+++  I   RE++F+ TKSG+E    N  G    D  QRPNKKKRYHRH
Sbjct: 6   HMFDMTPKSTSDNDLGITGSREDDFE-TKSGTEVTTENPSGEELQDPSQRPNKKKRYHRH 64

Query: 98  TQHQIQEMEA---------------FFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKR 142
           TQ QIQE+E+               FFKECPHPDDKQRKELSR+L LEPLQVKFWFQNKR
Sbjct: 65  TQRQIQELESLKTFSYILSFLEFYRFFKECPHPDDKQRKELSRDLNLEPLQVKFWFQNKR 124

Query: 143 TQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLE 202
           TQMK Q ERHEN  L+++N+KLRA+N RY+EALSNA+CPNCGGP AIGEMSFDE HLR+E
Sbjct: 125 TQMKAQSERHENQILKSDNDKLRAENNRYKEALSNATCPNCGGPAAIGEMSFDEQHLRIE 184

Query: 203 NARLREEIDRISAIAAKYVGKPV-VNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGA 261
           NARLREEIDRISAIAAKYVGKP+  ++  L+   PSR L+L VGNFG Q G  G EMYG 
Sbjct: 185 NARLREEIDRISAIAAKYVGKPLGSSFAPLAIHAPSRSLDLEVGNFGNQTGFVG-EMYGT 243

Query: 262 ADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF 321
            D+LRS+S P+E DKP+I+ELAVAAMEEL+RMAQ G+PLW+ S D +  +LNE+EY RTF
Sbjct: 244 GDILRSVSIPSETDKPIIVELAVAAMEELVRMAQTGDPLWL-STDNSVEILNEEEYFRTF 302

Query: 322 PRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGV 381
           PRGIGPKP G + EASR++AVVIMNHI+LVEILMDVNQWS VFSGIVSRA+TLEVLSTGV
Sbjct: 303 PRGIGPKPLGLRSEASRQSAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGV 362

Query: 382 AGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPS-PAVRC 440
           AGNYNGALQVMTAEFQVPSPLVPTRE+Y+VRYCKQH +G+WAVVDVSLD+LRPS P +R 
Sbjct: 363 AGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLRPSTPILRT 422

Query: 441 RRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCE 500
           RRRPSGCLIQE+PNGYSKVTW+EH+EVDDR VHN+YK LV +G AFGAKRWVATL+RQCE
Sbjct: 423 RRRPSGCLIQELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCE 482

Query: 501 RLASVMATNIPTGEVG------------------VITNQDGRKSMLKLAERMVISFCAGV 542
           RLAS MA+NIP    G                  +IT+ +GRKSMLKLAERMV+SFC+GV
Sbjct: 483 RLASSMASNIPGDLSGRGYSDQFKYVGAKLNENVMITSPEGRKSMLKLAERMVMSFCSGV 542

Query: 543 SASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDE 602
            ASTAH WTT+S TG+DDVRVMTRKS+DDPGRPPGIVLSAATSFW+PV PKRVFDFLRDE
Sbjct: 543 GASTAHAWTTMSTTGSDDVRVMTRKSMDDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDE 602

Query: 603 NTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPT 662
           N+R EWDILSNGG+VQEMAHIANG + GNCVSLLRVN   S NSSQSNMLILQESCTD +
Sbjct: 603 NSRKEWDILSNGGMVQEMAHIANGHEPGNCVSLLRVN---SGNSSQSNMLILQESCTDAS 659

Query: 663 ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHG---------ANIGEAA 713
            S+VIYAPVDIVAMNVVL+GGDPDYVALLPSGFAILPDG+   G         +     +
Sbjct: 660 GSYVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGSVGGGDGNQHQEMVSTTSSGS 719

Query: 714 SGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
            GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LI CTVERIKA++SC+
Sbjct: 720 CGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVSCD 767


>gi|242077254|ref|XP_002448563.1| hypothetical protein SORBIDRAFT_06g029270 [Sorghum bicolor]
 gi|241939746|gb|EES12891.1| hypothetical protein SORBIDRAFT_06g029270 [Sorghum bicolor]
          Length = 789

 Score = 1106 bits (2861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 551/710 (77%), Positives = 620/710 (87%), Gaps = 17/710 (2%)

Query: 64  EEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK 121
           +EF+S KSGSEN +G S DDQ+  QRP+KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK
Sbjct: 82  DEFES-KSGSENVDGVSVDDQDPNQRPSKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK 140

Query: 122 ELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCP 181
           ELSRELGLEPLQVKFWFQNKRTQMK QHERHEN+QLR ENEKLRA+NMRY+EALS+ASCP
Sbjct: 141 ELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRAENEKLRAENMRYKEALSSASCP 200

Query: 182 NCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVP-SRPL 240
           NCGGP A+GEMSFDEHHLR+ENARLREEIDRISAIAAKYVGKP+V++P+LS P+  +RP 
Sbjct: 201 NCGGPAALGEMSFDEHHLRVENARLREEIDRISAIAAKYVGKPMVSFPVLSSPLAGARPS 260

Query: 241 ELAVGNFGAQPGIGGG-EMYG---AADLLRSISAPTEADKPMIIELAVAAMEELIRMAQM 296
            L +G         G  +M+G   A DLLR     ++ADKPMI+ELAV AMEEL+RMAQ+
Sbjct: 261 PLDIGGGVGGAAAYGAVDMFGGGVAVDLLRGAVPQSDADKPMIVELAVTAMEELVRMAQL 320

Query: 297 GEPLW-MTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILM 355
            EPLW    LDG+A  LNE+EY   FP G+GPK  GFK EASR+++VVIM H +LVEILM
Sbjct: 321 DEPLWNAPGLDGSAETLNEEEYAHMFPGGLGPKQYGFKSEASRDSSVVIMTHANLVEILM 380

Query: 356 DVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCK 415
           DVNQ++TVFS IVSRA+TLEVLSTGVAGNYNGALQVM+ EFQVPSPLVPTRESY+VRYCK
Sbjct: 381 DVNQYATVFSSIVSRAVTLEVLSTGVAGNYNGALQVMSVEFQVPSPLVPTRESYFVRYCK 440

Query: 416 QHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNL 475
           Q+ +G+WAVVDVSLD+LRP+  ++CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR VHN+
Sbjct: 441 QNADGSWAVVDVSLDSLRPNSVLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNI 500

Query: 476 YKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMV 535
           YK LV++G AFG  RWV TLD QCE L SVM + IPT ++GVIT+ +GRKSMLKLAERMV
Sbjct: 501 YKLLVNSGLAFGPPRWVGTLDPQCEPLPSVMPSTIPTSDMGVITSTEGRKSMLKLAERMV 560

Query: 536 ISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRV 595
           +SFC GV+AS AH WTTLSG+GA+DVRVMTRKSVDDPGRPPGIVL+AATSFWLPVPPKRV
Sbjct: 561 MSFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLPVPPKRV 620

Query: 596 FDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQ 655
           FDFLRDE++RSEWDILSNGGVVQEMAHIANGRD GNCVSLLRVN   S NS+QSNMLILQ
Sbjct: 621 FDFLRDESSRSEWDILSNGGVVQEMAHIANGRDHGNCVSLLRVN---STNSNQSNMLILQ 677

Query: 656 ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANI---GEA 712
           ESCTD + S+VIYAPVD+VAMNVVLNGGDPDYVALLPSGFAILPDG +  G+N+   G  
Sbjct: 678 ESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPA--GSNMQGDGGV 735

Query: 713 ASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
            SGGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIACTVERIKA++S ES
Sbjct: 736 GSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVSGES 785


>gi|1881536|gb|AAB49378.1| meristem L1 layer homeobox protein [Arabidopsis thaliana]
          Length = 718

 Score = 1105 bits (2858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/713 (75%), Positives = 606/713 (84%), Gaps = 37/713 (5%)

Query: 83  DQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKR 142
           D  QRPNKKKRYHRHTQ QIQE+E+FFKECPHPDDKQRKELSREL LEPLQVKFWFQNKR
Sbjct: 11  DPNQRPNKKKRYHRHTQRQIQELESFFKECPHPDDKQRKELSRELSLEPLQVKFWFQNKR 70

Query: 143 TQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLE 202
           TQMK QHERHEN  L++EN+KLRA+N RY++ALSNA+CPNCGGP AIGEMSFDE HLR+E
Sbjct: 71  TQMKAQHERHENQILKSENDKLRAENNRYKDALSNATCPNCGGPAAIGEMSFDEQHLRIE 130

Query: 203 NARLREEIDRISAIAAKYVGKPVV------NYPLLSPPVPSRPLELAVGNFG----AQPG 252
           NARLREEIDRISAIAAKYVGKP++           S  +PSR L+L VGNFG    +  G
Sbjct: 131 NARLREEIDRISAIAAKYVGKPLMANSSSFPQLSSSHHIPSRSLDLEVGNFGNNNNSHTG 190

Query: 253 IGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVL 312
             G EM+G++D+LRS+S P+EADKPMI+ELAVAAMEEL+RMAQ G+PLW++S D +  +L
Sbjct: 191 FVG-EMFGSSDILRSVSIPSEADKPMIVELAVAAMEELVRMAQTGDPLWVSS-DNSVEIL 248

Query: 313 NEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAM 372
           NE+EY RTFPRGIGPKP G + EASRE+ VVIMNHI+L+EILMDVNQWS+VF GIVSRA+
Sbjct: 249 NEEEYFRTFPRGIGPKPIGLRSEASRESTVVIMNHINLIEILMDVNQWSSVFCGIVSRAL 308

Query: 373 TLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL 432
           TLEVLSTGV GNYNGALQVMTAEFQVPSPLVPTRE+Y+VRYCKQH +G WAVVDVSLD+L
Sbjct: 309 TLEVLSTGVRGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSL 368

Query: 433 RPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
           RPSP  R RRRPSGCLIQE+ NGYSKVTWVEH+EVDDR VHN+YK LV+TG AFGAKRWV
Sbjct: 369 RPSPITRSRRRPSGCLIQELQNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWV 428

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTT 552
           ATLDRQCERLAS MA+NIP  ++ VIT+ +GRKSMLKLAERMV+SFC GV ASTA  WTT
Sbjct: 429 ATLDRQCERLASSMASNIPACDLSVITSPEGRKSMLKLAERMVMSFCTGVGASTADAWTT 488

Query: 553 LSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILS 612
           LS TG+DDVRVMTRKS+DDPGRPPGIVLSAATSFW+PV PKRVFDFLRDEN+RSEWDILS
Sbjct: 489 LSTTGSDDVRVMTRKSMDDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSEWDILS 548

Query: 613 NGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVD 672
           NGG+VQEMAHIANGRD GN VSLLRVN   S NS QSNMLILQESCTD + S+VIYAPVD
Sbjct: 549 NGGLVQEMAHIANGRDPGNSVSLLRVN---SGNSGQSNMLILQESCTDASGSYVIYAPVD 605

Query: 673 IVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAAS------------------ 714
           I+AMNVVL+GGDPDYVALLPSGFAILPDG++  G     A++                  
Sbjct: 606 IIAMNVVLSGGDPDYVALLPSGFAILPDGSARGGGGSANASAGAGVEGGGEGNNLEVVTT 665

Query: 715 ----GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
               GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LI CTVERIKA+L+C+ A
Sbjct: 666 TGSCGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAALACDGA 718


>gi|39545845|emb|CAE04753.3| OSJNBb0060E08.16 [Oryza sativa Japonica Group]
          Length = 781

 Score = 1101 bits (2848), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 553/716 (77%), Positives = 625/716 (87%), Gaps = 29/716 (4%)

Query: 64  EEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK 121
           +EF+S KSGSEN +G S DDQ+  QRP +KKRYHRHTQHQIQEMEAFFKECPHPDDKQRK
Sbjct: 75  DEFES-KSGSENVDGVSVDDQDPNQRP-RKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK 132

Query: 122 ELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCP 181
           ELSRELGLEPLQVKFWFQNKRTQMK QHERHEN+QLR++NEKLRA+NMRY+EALS+ASCP
Sbjct: 133 ELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKLRAENMRYKEALSSASCP 192

Query: 182 NCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSR--- 238
           NCGGP A+GEMSFDEHHLR+ENARLREEIDRISAIAAKYVGKP+V +P+LS P+ +    
Sbjct: 193 NCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKPMVPFPVLSNPMAAAASR 252

Query: 239 -PLELAVGNFGAQPGIGGGEMYGAA---DLLRSISAPTEADKPMIIELAVAAMEELIRMA 294
            PL+L V  +G       G+M+G     +LLR +   +E DKPMI+ELAVAAMEEL+RMA
Sbjct: 253 APLDLPVAPYGVP-----GDMFGGGGAGELLRGVQ--SEVDKPMIVELAVAAMEELVRMA 305

Query: 295 QMGEPLWMTS--LDGTAA---VLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHIS 349
           Q+ EPLW  +  LD TAA    L+E+EY R FPRG+GPK  G + EASR++AVVIM H +
Sbjct: 306 QLDEPLWSVAPPLDATAAAMETLSEEEYARMFPRGLGPKQYGLRSEASRDSAVVIMTHAN 365

Query: 350 LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESY 409
           LVEILMD NQ++ VFS IVSRA+TLEVLSTGVAGNYNGALQVM+ EFQVPSPLVPTRESY
Sbjct: 366 LVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGALQVMSVEFQVPSPLVPTRESY 425

Query: 410 YVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 469
           +VRYCKQ+ +GTWAVVDVSLD+LRPSP ++CRRRPSGCLIQEMPNGYSKVTWVEHVEVDD
Sbjct: 426 FVRYCKQNADGTWAVVDVSLDSLRPSPVLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 485

Query: 470 RGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK 529
           R VHN+YK LV++G AFGA+RWV TLDRQCERLASVMA+NIPT ++GVIT+ +GRKSMLK
Sbjct: 486 RSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPTSDIGVITSSEGRKSMLK 545

Query: 530 LAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP 589
           LAERMV+SFC GV+AS AH WTTLSG+GA+DVRVMTRKSVDDPGRPPGIVL+AATSFWLP
Sbjct: 546 LAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLP 605

Query: 590 VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQS 649
           VPPKRVFDFLRDE++RSEWDILSNGG+VQEMAHIANGRD GNCVSLLRV    S+NS+QS
Sbjct: 606 VPPKRVFDFLRDESSRSEWDILSNGGIVQEMAHIANGRDQGNCVSLLRV---NSSNSNQS 662

Query: 650 NMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTS---LHG 706
           NMLILQESCTD + S+VIYAPVD+VAMNVVLNGGDPDYVALLPSGFAILPDG +     G
Sbjct: 663 NMLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPAHDGGDG 722

Query: 707 ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
                  SGGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIACTVERIKA++S ES
Sbjct: 723 DGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVSGES 778


>gi|75134886|sp|Q6ZAR0.1|ROC1_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC1; AltName:
           Full=GLABRA 2-like homeobox protein 1; AltName:
           Full=HD-ZIP protein ROC1; AltName: Full=Homeodomain
           transcription factor ROC1; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 1
 gi|38636931|dbj|BAD03194.1| roc1(homeobox protein) [Oryza sativa Japonica Group]
 gi|38637066|dbj|BAD03323.1| roc1(homeobox protein) [Oryza sativa Japonica Group]
          Length = 784

 Score = 1100 bits (2846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 571/793 (72%), Positives = 647/793 (81%), Gaps = 48/793 (6%)

Query: 6   MIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEG-------------QLHPLDMTQN 52
           M PAR MP  IGRNG V     S+ L L+Q  +M++              Q+        
Sbjct: 1   MTPARRMPPVIGRNG-VAYESPSAQLPLTQ-ADMLDSHHLQQALQQQYFDQIPVTTTAAA 58

Query: 53  TSESEIARLREE------EFDSTKSGSENHEGA----SGDDQE--QRPNKKKRYHRHTQH 100
            S   +   R +      EF+S KS SEN +GA    SGDDQ+  QRP +KKRYHRHTQH
Sbjct: 59  DSGDNMLHGRADAGGLVDEFES-KSCSENVDGAGDGLSGDDQDPNQRP-RKKRYHRHTQH 116

Query: 101 QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTE 160
           QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK QHERHEN QLR E
Sbjct: 117 QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENAQLRAE 176

Query: 161 NEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKY 220
           N+KLRA+NMRY+EALS+ASCPNCGGP A+GEMSFDEHHLR+ENARLR+EIDRIS IAAK+
Sbjct: 177 NDKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRVENARLRDEIDRISGIAAKH 236

Query: 221 VGKP-VVNYPLLSPPVP----SRPLELAVGNFGA-QPGIGGGEMYGAA-DLLRSISAPTE 273
           VGKP +V++P+LS P+       PL+LA G +G   PG+   +M+G A DLLR +  P +
Sbjct: 237 VGKPPIVSFPVLSSPLAVAAARSPLDLA-GAYGVVTPGL---DMFGGAGDLLRGVH-PLD 291

Query: 274 ADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFK 333
           ADKPMI+ELAVAAM+EL++MAQ+ EPLW +S +  AA+L+E+EY R FPRG+GPK  G K
Sbjct: 292 ADKPMIVELAVAAMDELVQMAQLDEPLWSSSSEPAAALLDEEEYARMFPRGLGPKQYGLK 351

Query: 334 CEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMT 393
            EASR  AVVIM H +LVEILMDVNQ++TVFS IVSRA T EVLSTGVAGNYNGALQVM+
Sbjct: 352 SEASRHGAVVIMTHSNLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAGNYNGALQVMS 411

Query: 394 AEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMP 453
            EFQVPSPLVPTRESY+VRYCK + +GTWAVVDVSLD+LRPSP  +CRRRPSGCLIQEMP
Sbjct: 412 MEFQVPSPLVPTRESYFVRYCKNNSDGTWAVVDVSLDSLRPSPVQKCRRRPSGCLIQEMP 471

Query: 454 NGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTG 513
           NGYSKVTWVEHVEVDD  VHN+YK LV++G AFGAKRWV TLDRQCERLAS MA+NIP G
Sbjct: 472 NGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPNG 531

Query: 514 EVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPG 573
           ++GVIT+ +GRKSMLKLAERMV SFC GV+AS AH WTTLSG+GA+DVRVMTRKSVDDPG
Sbjct: 532 DLGVITSVEGRKSMLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVDDPG 591

Query: 574 RPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCV 633
           RPPGIVL+AATSFWLPVPP  VFDFLRDE +RSEWDILSNGG VQEMAHIANGRD GN V
Sbjct: 592 RPPGIVLNAATSFWLPVPPAAVFDFLRDETSRSEWDILSNGGAVQEMAHIANGRDHGNSV 651

Query: 634 SLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPS 693
           SLLRVN   SANS+QSNMLILQESCTD + S+V+YAPVDIVAMNVVLNGGDPDYVALLPS
Sbjct: 652 SLLRVN---SANSNQSNMLILQESCTDASGSYVVYAPVDIVAMNVVLNGGDPDYVALLPS 708

Query: 694 GFAILPDGTSLHG-ANIGE---AASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIAC 749
           GFAILPDG S +  A +GE    + GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIAC
Sbjct: 709 GFAILPDGPSGNAQAAVGENGSGSGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIAC 768

Query: 750 TVERIKASLSCES 762
           TVERIKA++  +S
Sbjct: 769 TVERIKAAVCRDS 781


>gi|356497482|ref|XP_003517589.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 731

 Score = 1098 bits (2839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/730 (73%), Positives = 619/730 (84%), Gaps = 16/730 (2%)

Query: 37  TNMMEGQLHPLDMT----QNTSESEIAR-LREEEFDSTKSGSENHEGASGDDQEQRPN-K 90
           TNM +   H LDM+       SES++A+  R++E++ TKS ++  +  SGDDQ+  P  K
Sbjct: 4   TNMFDSHPHLLDMSPPHKTTCSESDLAKPCRDDEYE-TKSITDTMDAPSGDDQDPNPRPK 62

Query: 91  KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           KK Y RHTQ QI+EMEAFFK+CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE
Sbjct: 63  KKGYRRHTQRQIEEMEAFFKQCPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 122

Query: 151 RHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEI 210
           R+EN  L+ ENEKLRA+N RY+EAL+NA+CPNCGGP A+GEMSFDE HLR+ENARLREEI
Sbjct: 123 RNENAILKAENEKLRAENSRYKEALTNATCPNCGGPAALGEMSFDEQHLRIENARLREEI 182

Query: 211 DRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISA 270
           DRIS IAAKYVGKPV +              + VGN+G+Q G  G EMYG +DL R + A
Sbjct: 183 DRISGIAAKYVGKPVTSSYSNL--SSLNNNHVPVGNYGSQSGTVG-EMYGGSDLFRPLPA 239

Query: 271 PTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFP-RGIGPKP 329
           P +ADKPMI+ELAVAAMEEL R+AQ GEPLW+ S +  + +LNEDEY+RTFP RG+GPKP
Sbjct: 240 PADADKPMIVELAVAAMEELTRLAQAGEPLWVPS-NHHSEILNEDEYLRTFPTRGLGPKP 298

Query: 330 TGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGAL 389
            G + EASRE+ VVIMNHI+L++ILMDVNQWSTVF GIVSRA+TLEVLSTG+AGNYNGAL
Sbjct: 299 LGLRSEASRESVVVIMNHINLIDILMDVNQWSTVFCGIVSRALTLEVLSTGIAGNYNGAL 358

Query: 390 QVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLI 449
           QVM++EFQV SPLVPTRE+Y+VRYCKQ  +G WAVVDVSLDNLRPS   R RRRPSGCLI
Sbjct: 359 QVMSSEFQVASPLVPTRENYFVRYCKQQPDGIWAVVDVSLDNLRPSTISRSRRRPSGCLI 418

Query: 450 QEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATN 509
           QE+PNGYSKVTW+EHVEVDDR VH++Y+ LV++G AFGAKRWVATL+RQCERLAS MA N
Sbjct: 419 QELPNGYSKVTWIEHVEVDDRAVHSIYRTLVNSGLAFGAKRWVATLERQCERLASSMANN 478

Query: 510 IPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSV 569
           IP G++ VIT+ +GRKSM+KLAERMV+S+C GV ASTAH WTTLS TG DDVRVMTRKS 
Sbjct: 479 IPAGDLCVITSAEGRKSMMKLAERMVMSYCTGVGASTAHAWTTLSATGCDDVRVMTRKST 538

Query: 570 DDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDT 629
           D+PGRPPGIVLSAATSFWLPVPPKRVF FLRD+N+R+EWDILSNGG+VQE+AHIANGRD 
Sbjct: 539 DEPGRPPGIVLSAATSFWLPVPPKRVFHFLRDQNSRNEWDILSNGGLVQELAHIANGRDP 598

Query: 630 GNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVA 689
           GNCVSLLRVN   SANSSQSNMLILQESCTD T S+V+YAPVDIVAMNVVL+GGDPDYVA
Sbjct: 599 GNCVSLLRVN---SANSSQSNMLILQESCTDSTGSYVVYAPVDIVAMNVVLSGGDPDYVA 655

Query: 690 LLPSGFAILPDG-TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIA 748
           LLPSGFAILPDG  +L+G  I +  SGGSLLTVAFQILVDS PTAKLSLGSVATVN+LI 
Sbjct: 656 LLPSGFAILPDGPPALNGGPIHDVGSGGSLLTVAFQILVDSAPTAKLSLGSVATVNSLIK 715

Query: 749 CTVERIKASL 758
           CTVERIK ++
Sbjct: 716 CTVERIKVAV 725


>gi|19072102|dbj|BAB85750.1| Roc1 [Oryza sativa]
          Length = 784

 Score = 1098 bits (2839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 570/793 (71%), Positives = 646/793 (81%), Gaps = 48/793 (6%)

Query: 6   MIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEG-------------QLHPLDMTQN 52
           M PAR MP  IGRNG V     S+ L L+Q  +M++              Q+        
Sbjct: 1   MTPARRMPPVIGRNG-VAYESPSAQLPLTQ-ADMLDSHHLQQALQQQYFDQIPVTTTAAA 58

Query: 53  TSESEIARLREE------EFDSTKSGSENHEGA----SGDDQE--QRPNKKKRYHRHTQH 100
            S   +   R +      EF+S KS SEN +GA    SGDDQ+  QRP +KKRYHRHTQH
Sbjct: 59  DSGDNMLHGRADAGGLVDEFES-KSCSENVDGAGDGLSGDDQDPNQRP-RKKRYHRHTQH 116

Query: 101 QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTE 160
           QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK QHERHEN QLR E
Sbjct: 117 QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENAQLRAE 176

Query: 161 NEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKY 220
           N+KLRA+NMRY+EALS+ASCPNCGGP A+GEMSFDEHHLR+ENARLR+EIDRIS IAAK+
Sbjct: 177 NDKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRVENARLRDEIDRISGIAAKH 236

Query: 221 VGKP-VVNYPLLSPPVP----SRPLELAVGNFGA-QPGIGGGEMYGAA-DLLRSISAPTE 273
           VGKP +V++ +LS P+       PL+LA G +G   PG+   +M+G A DLLR +  P +
Sbjct: 237 VGKPPIVSFSVLSSPLAVAAARSPLDLA-GAYGVVTPGL---DMFGGAGDLLRGVH-PLD 291

Query: 274 ADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFK 333
           ADKPMI+ELAVAAM+EL++MAQ+ EPLW +S +  AA+L+E+EY R FPRG+GPK  G K
Sbjct: 292 ADKPMIVELAVAAMDELVQMAQLDEPLWSSSSEPAAALLDEEEYARMFPRGLGPKQYGLK 351

Query: 334 CEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMT 393
            EASR  AVVIM H +LVEILMDVNQ++TVFS IVSRA T EVLSTGVAGNYNGALQVM+
Sbjct: 352 SEASRHGAVVIMTHSNLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAGNYNGALQVMS 411

Query: 394 AEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMP 453
            EFQVPSPLVPTRESY+VRYCK + +GTWAVVDVSLD+LRPSP  +CRRRPSGCLIQEMP
Sbjct: 412 MEFQVPSPLVPTRESYFVRYCKNNSDGTWAVVDVSLDSLRPSPVQKCRRRPSGCLIQEMP 471

Query: 454 NGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTG 513
           NGYSKVTWVEHVEVDD  VHN+YK LV++G AFGAKRWV TLDRQCERLAS MA+NIP G
Sbjct: 472 NGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPNG 531

Query: 514 EVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPG 573
           ++GVIT+ +GRKSMLKLAERMV SFC GV+AS AH WTTLSG+GA+DVRVMTRKSVDDPG
Sbjct: 532 DLGVITSVEGRKSMLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVDDPG 591

Query: 574 RPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCV 633
           RPPGIVL+AATSFWLPVPP  VFDFLRDE +RSEWDILSNGG VQEMAHIANGRD GN V
Sbjct: 592 RPPGIVLNAATSFWLPVPPAAVFDFLRDETSRSEWDILSNGGAVQEMAHIANGRDHGNSV 651

Query: 634 SLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPS 693
           SLLRVN   SANS+QSNMLILQESCTD + S+V+YAPVDIVAMNVVLNGGDPDYVALLPS
Sbjct: 652 SLLRVN---SANSNQSNMLILQESCTDASGSYVVYAPVDIVAMNVVLNGGDPDYVALLPS 708

Query: 694 GFAILPDGTSLHG-ANIGE---AASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIAC 749
           GFAILPDG S +  A +GE    + GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIAC
Sbjct: 709 GFAILPDGPSGNAQAAVGENGSGSGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIAC 768

Query: 750 TVERIKASLSCES 762
           TVERIKA++  +S
Sbjct: 769 TVERIKAAVCRDS 781


>gi|116312004|emb|CAJ86361.1| OSIGBa0117N13.5 [Oryza sativa Indica Group]
          Length = 781

 Score = 1094 bits (2830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 552/716 (77%), Positives = 624/716 (87%), Gaps = 29/716 (4%)

Query: 64  EEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK 121
           +EF+S KSGSEN +G S DDQ+  QRP +KKRYHRHTQHQIQEMEAFFKECPHPDDKQRK
Sbjct: 75  DEFES-KSGSENVDGVSVDDQDPNQRP-RKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK 132

Query: 122 ELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCP 181
           ELSRELGLEPLQVKFWFQNKRTQMK QHERHEN+QLR++NEKLRA+NMRY+EALS+ASCP
Sbjct: 133 ELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKLRAENMRYKEALSSASCP 192

Query: 182 NCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSR--- 238
           NCGGP A+GEMSFDEHHLR+ENARLREEIDRISAIAAKYVGKP+V +P+LS P+ +    
Sbjct: 193 NCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKPMVPFPVLSNPMAAAASR 252

Query: 239 -PLELAVGNFGAQPGIGGGEMYGAA---DLLRSISAPTEADKPMIIELAVAAMEELIRMA 294
            PL+L V  +G       G+M+G     +LLR +   +E DKPMI+ELAVAAMEEL+RMA
Sbjct: 253 APLDLPVAPYGVP-----GDMFGGGGAGELLRGVQ--SEVDKPMIVELAVAAMEELVRMA 305

Query: 295 QMGEPLWMTS--LDGTAA---VLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHIS 349
           Q+ EPLW  +  LD  AA    L+E+EY R FPRG+GPK  G + EASR++AVVIM H +
Sbjct: 306 QLDEPLWSVAPPLDAAAAAMETLSEEEYARMFPRGLGPKQYGLRSEASRDSAVVIMTHAN 365

Query: 350 LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESY 409
           LVEILMD NQ++ VFS IVSRA+TLEVLSTGVAGNYNGALQVM+ EFQVPSPLVPTRESY
Sbjct: 366 LVEILMDANQYAAVFSNIVSRAVTLEVLSTGVAGNYNGALQVMSVEFQVPSPLVPTRESY 425

Query: 410 YVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 469
           +VRYCKQ+ +GTWAVVDVSLD+LRPSP ++CRRRPSGCLIQEMPNGYSKVTWVEHVEVDD
Sbjct: 426 FVRYCKQNADGTWAVVDVSLDSLRPSPVLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 485

Query: 470 RGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK 529
           R VHN+YK LV++G AFGA+RWV TLDRQCERLASVMA+NIPT ++GVIT+ +GRKSMLK
Sbjct: 486 RSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPTSDIGVITSSEGRKSMLK 545

Query: 530 LAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP 589
           LAERMV+SFC GV+AS AH WTTLSG+GA+DVRVMTRKSVDDPGRPPGIVL+AATSFWLP
Sbjct: 546 LAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLP 605

Query: 590 VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQS 649
           VPPKRVFDFLRDE++RSEWDILSNGG+VQEMAHIANGRD GNCVSLLRV    S+NS+QS
Sbjct: 606 VPPKRVFDFLRDESSRSEWDILSNGGIVQEMAHIANGRDQGNCVSLLRV---NSSNSNQS 662

Query: 650 NMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTS---LHG 706
           NMLILQESCTD + S+VIYAPVD+VAMNVVLNGGDPDYVALLPSGFAILPDG +     G
Sbjct: 663 NMLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPAHDGGDG 722

Query: 707 ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
                  SGGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIACTVERIKA++S ES
Sbjct: 723 DGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVSGES 778


>gi|356540579|ref|XP_003538765.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 732

 Score = 1090 bits (2820), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/729 (73%), Positives = 616/729 (84%), Gaps = 16/729 (2%)

Query: 38  NMMEGQLHPLDM----TQNTSESEIAR-LREEEFDSTKSGSENHEGASGDDQEQRPN-KK 91
           NM +   H LDM    T   SES++ +  R++E++ TKS ++  +  SGDDQ+  P  KK
Sbjct: 5   NMFDSHPHLLDMSPHKTTACSESDLGKACRDDEYE-TKSITDAMDAPSGDDQDPNPRPKK 63

Query: 92  KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
           K Y RHTQ QI+EMEAFFK+ PHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER
Sbjct: 64  KGYRRHTQRQIEEMEAFFKQFPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 123

Query: 152 HENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEID 211
           +EN  L+TENEKLRA+N RY+EALSNA+CPNCGG  A+GEMSFDE HLR+ENARLREEID
Sbjct: 124 NENAILKTENEKLRAENNRYKEALSNATCPNCGGSAALGEMSFDEQHLRIENARLREEID 183

Query: 212 RISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAP 271
           RIS IAAKYVGKPV +              + VG +G+Q G  G EMYG +DL RS+ AP
Sbjct: 184 RISGIAAKYVGKPVTSSYSNL--SSLNNNHVPVGKYGSQSGTVG-EMYGGSDLFRSLPAP 240

Query: 272 TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFP-RGIGPKPT 330
            +ADKPMI+ELAVAAMEEL R+AQ G+PLW+ S +  + +LNE+EY+RTFP RG+GPKP 
Sbjct: 241 ADADKPMIVELAVAAMEELTRLAQAGDPLWVPS-NHHSEILNEEEYLRTFPNRGLGPKPL 299

Query: 331 GFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ 390
           G + EASRE+ VVIMNHI+L++ILMDVNQWSTVF GIVSRA+TLEVLSTGVAGNYNGALQ
Sbjct: 300 GLRSEASRESVVVIMNHINLIDILMDVNQWSTVFCGIVSRALTLEVLSTGVAGNYNGALQ 359

Query: 391 VMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQ 450
           VM++EFQVPSPLVPTRE+Y+VRYCKQ  +G WAVVDVSLDNLRP+   R RRRPSGCLIQ
Sbjct: 360 VMSSEFQVPSPLVPTRENYFVRYCKQQPDGIWAVVDVSLDNLRPNTISRSRRRPSGCLIQ 419

Query: 451 EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI 510
           E+PNGYSKVTW+EHVEVDDR VH++Y+ LV++G AFGAKRWVATLDRQCERLAS MA NI
Sbjct: 420 ELPNGYSKVTWIEHVEVDDRAVHSIYRPLVNSGLAFGAKRWVATLDRQCERLASSMANNI 479

Query: 511 PTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 570
           P G++ VIT+ +GRKSM+KLAERMV+S+C GV ASTAH WTTLS TG DDVRVMTRKS D
Sbjct: 480 PAGDLCVITSAEGRKSMMKLAERMVMSYCTGVGASTAHAWTTLSATGCDDVRVMTRKSTD 539

Query: 571 DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTG 630
           +PGRPPGIVLSAATSFWLPVPP RVFDFLRDEN+R+EWDILSNGG+VQE+AHIANGRD G
Sbjct: 540 EPGRPPGIVLSAATSFWLPVPPNRVFDFLRDENSRNEWDILSNGGLVQELAHIANGRDPG 599

Query: 631 NCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVAL 690
           NCVSLLRVN   SANSSQSNMLILQESCTD T S+V+YAPVDIVAMNVVL+GGDPDYVAL
Sbjct: 600 NCVSLLRVN---SANSSQSNMLILQESCTDSTGSYVVYAPVDIVAMNVVLSGGDPDYVAL 656

Query: 691 LPSGFAILPDG-TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIAC 749
           LPSGFAILPDG  +L+G  + E  SGGSLLTV FQILVDS PTAKLSLGSVATVN+LI C
Sbjct: 657 LPSGFAILPDGPPALNGGPMHEVGSGGSLLTVGFQILVDSAPTAKLSLGSVATVNSLIKC 716

Query: 750 TVERIKASL 758
           TVERIK ++
Sbjct: 717 TVERIKVAV 725


>gi|226501626|ref|NP_001145750.1| uncharacterized protein LOC100279257 [Zea mays]
 gi|219884299|gb|ACL52524.1| unknown [Zea mays]
 gi|345195188|tpg|DAA34959.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413916966|gb|AFW56898.1| putative homeobox/lipid-binding domain family protein isoform 1
           [Zea mays]
 gi|413916967|gb|AFW56899.1| putative homeobox/lipid-binding domain family protein isoform 2
           [Zea mays]
          Length = 802

 Score = 1090 bits (2818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 562/801 (70%), Positives = 638/801 (79%), Gaps = 55/801 (6%)

Query: 6   MIPARNMPSTIGRNGNVGGLGSSSGLTLSQ---PTNMM---------EGQLH------PL 47
           M PAR MP+ IGRN  V   GSSS L+LSQ   P + +         E QL        +
Sbjct: 1   MTPARRMPAMIGRNNGVA-FGSSSALSLSQVIIPADFLDSHHLQQAFEQQLFEQIPAAAV 59

Query: 48  DMTQNTSESEIARLREEEFDSTKSGSENHEG-ASGDDQE------QRPNKKKRYHRHTQH 100
           D + N        L  +EF+S KS SEN +G ASGDD +      QRPNKKKRYHRHTQH
Sbjct: 60  DSSDNIIHGRSDAL-VDEFES-KSCSENPDGTASGDDGQGDEDPNQRPNKKKRYHRHTQH 117

Query: 101 QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTE 160
           QI+EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK QHER EN QLR E
Sbjct: 118 QIEEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERQENAQLRAE 177

Query: 161 NEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKY 220
           N+KLRA+NMRY++AL  ASCP+CGGP A+GEMSFDEHHLRLENARLR+EIDRIS IAAK+
Sbjct: 178 NDKLRAENMRYKDALGTASCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISGIAAKH 237

Query: 221 VGKPVVNYPLLSPPVPSR-PLELAVGNFGAQP------GIGGGEMYGAA--DLLRSISA- 270
           VGKP+V++P+LS P+ +R P +LA G +G QP            ++G A  DLLRS+SA 
Sbjct: 238 VGKPMVSFPVLSSPLAARSPFDLA-GAYGVQPPGGGGGLGAADHLFGGAAGDLLRSVSAG 296

Query: 271 PTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPT 330
              ADK MI+ELAVAAM+EL+RMA++  PLW   + G    L+E+EY RTFP G+GP+  
Sbjct: 297 QLSADKSMIVELAVAAMDELLRMARVDAPLWNGGVAGVPQQLDEEEYGRTFPGGLGPRQY 356

Query: 331 GFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ 390
           G + EASR+ AVVIM   SLVEILMD N+++ VFS IVSRA T EVLSTGVAG+YNGALQ
Sbjct: 357 GLRPEASRDDAVVIMTRDSLVEILMDANRFAAVFSSIVSRASTHEVLSTGVAGSYNGALQ 416

Query: 391 VMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQ 450
           VM+ EFQVPSPLVPTRESY+ RYCK + +GTWAVVDVSLD+LRPSPA++CRRRPSGCL+Q
Sbjct: 417 VMSMEFQVPSPLVPTRESYFARYCKNNPDGTWAVVDVSLDSLRPSPALKCRRRPSGCLVQ 476

Query: 451 EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI 510
           EMPNGYSKVTWVEHVEVDDR VHNLY+ LV++G  FGA RWV TLDRQCERLAS MA+NI
Sbjct: 477 EMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLGFGATRWVGTLDRQCERLASAMASNI 536

Query: 511 PTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 570
           P G++GVIT+ +GRKSMLKLAERMV SFC GV+AS AH WTTLSG+GA+DVRVMTRKSVD
Sbjct: 537 PNGDLGVITSIEGRKSMLKLAERMVASFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVD 596

Query: 571 DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTG 630
           DPGRPPGIVL+AATSFWLPVPPKRVFDFLRDE +RSEWDILSNGG VQEMAHIANGRD G
Sbjct: 597 DPGRPPGIVLNAATSFWLPVPPKRVFDFLRDETSRSEWDILSNGGAVQEMAHIANGRDHG 656

Query: 631 NCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVAL 690
           NCVSLLRVN   SANS+QSNMLILQESCTD + S+V+YAPVD+VAMNVVLNGGDPDYVAL
Sbjct: 657 NCVSLLRVN---SANSNQSNMLILQESCTDASGSYVVYAPVDVVAMNVVLNGGDPDYVAL 713

Query: 691 LPSGFAILPDGTSLHG-------------ANIGEAASGGSLLTVAFQILVDSVPTAKLSL 737
           LPSGFAILPDG    G                   A+GGSLLTVAFQILVDSVPTAKLSL
Sbjct: 714 LPSGFAILPDGPPAPGMAPHHGGEGAAGGGLEELEAAGGSLLTVAFQILVDSVPTAKLSL 773

Query: 738 GSVATVNNLIACTVERIKASL 758
           GSVATVN+LIACTVERIKA++
Sbjct: 774 GSVATVNSLIACTVERIKAAV 794


>gi|242078393|ref|XP_002443965.1| hypothetical protein SORBIDRAFT_07g005180 [Sorghum bicolor]
 gi|241940315|gb|EES13460.1| hypothetical protein SORBIDRAFT_07g005180 [Sorghum bicolor]
          Length = 781

 Score = 1088 bits (2815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 556/784 (70%), Positives = 628/784 (80%), Gaps = 35/784 (4%)

Query: 6   MIPARNMPSTIGRNGNVGG------------LGSSSGLTLSQPTNMMEGQLHPLDMTQNT 53
           M PAR MP+ IGRNG   G            L S       Q     +     +D + N 
Sbjct: 1   MTPARRMPAMIGRNGMAFGSSSALSLSQADLLDSHHLQQAFQQQLFDQIPATAVDSSDNI 60

Query: 54  SESEIARLREEEFDSTKSGSENHEGASGDDQE----QRPNKKKRYHRHTQHQIQEMEAFF 109
                  L  +EF+S KS SEN +G SGDD +    QRPNKKKRYHRHTQHQIQEMEAFF
Sbjct: 61  IHGRSDTL-VDEFES-KSCSENPDGTSGDDGQEDPNQRPNKKKRYHRHTQHQIQEMEAFF 118

Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNM 169
           KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK QHER EN QLR EN+KLRA+NM
Sbjct: 119 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERQENAQLRAENDKLRAENM 178

Query: 170 RYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYP 229
           RY+EAL  ASCP+CGGP A+GEMSFDEHHLRLENARLR+EIDRIS IAAK+VGKP+V++P
Sbjct: 179 RYKEALGTASCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISGIAAKHVGKPMVSFP 238

Query: 230 LLSPPVPSRPLELA---VGNFGAQPG-IGGGEMYG----AADLLRSIS-APTEADKPMII 280
           +LS P+ +          G +G QPG +G   ++G    A DLLRS+S    +ADKPMI+
Sbjct: 239 VLSSPLAAAAARSPLDLAGAYGVQPGGLGADHLFGVGAGAGDLLRSVSTGQLDADKPMIV 298

Query: 281 ELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRET 340
           ELAVAAM+EL+RMA++  PLW   + G    L+E+EY R FP G+GP+  G + EASR+ 
Sbjct: 299 ELAVAAMDELLRMARLDAPLWGGGVAGVQ--LDEEEYGRMFPGGLGPRQYGLRPEASRDN 356

Query: 341 AVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPS 400
           AVVIM   SLVEILMD N+++ VFS IVSRA T EVLSTGVAG+YNGALQVM+ EFQVPS
Sbjct: 357 AVVIMTRDSLVEILMDANRFAAVFSSIVSRASTHEVLSTGVAGSYNGALQVMSMEFQVPS 416

Query: 401 PLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVT 460
           PLVPTRESY+VRYCK + +GTWAVVDVSLD+LRPSP ++CRRRPSGCLIQEMPNGYSKVT
Sbjct: 417 PLVPTRESYFVRYCKNNPDGTWAVVDVSLDSLRPSPVMKCRRRPSGCLIQEMPNGYSKVT 476

Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITN 520
           WVEHVEVDDR VHNLY+ LV++G AFGAKRWV TLDRQCERLAS MA+NIP G++GVIT+
Sbjct: 477 WVEHVEVDDRSVHNLYRPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPNGDLGVITS 536

Query: 521 QDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVL 580
            +GRKSMLKLAERMV SFC GV+AS AH WTTLSG+GA+DVRVMTRKSVDDPGRPPGIVL
Sbjct: 537 IEGRKSMLKLAERMVASFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVL 596

Query: 581 SAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           +AATSFWLPVPPKRVFDFLRDE +RSEWDILSNGG VQEMAHIANGRD GNCVSLLRVN 
Sbjct: 597 NAATSFWLPVPPKRVFDFLRDETSRSEWDILSNGGAVQEMAHIANGRDHGNCVSLLRVN- 655

Query: 641 LQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPD 700
             SANS+QSNMLILQESCTD + S+V+YAPVD+VAMNVVLNGGDPDYVALLPSGFAILPD
Sbjct: 656 --SANSNQSNMLILQESCTDASGSYVVYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPD 713

Query: 701 ---GTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKAS 757
              G + HG        GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIACTVERIKA+
Sbjct: 714 GPPGMAPHGEGAALETGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAA 773

Query: 758 LSCE 761
           +  E
Sbjct: 774 VCVE 777


>gi|413921156|gb|AFW61088.1| outer cell layer5a [Zea mays]
          Length = 785

 Score = 1085 bits (2806), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 543/724 (75%), Positives = 611/724 (84%), Gaps = 30/724 (4%)

Query: 64  EEFDSTKSGSENHEGASGDD-----QEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK 118
           +EF+S KS SEN +G SGDD       QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK
Sbjct: 63  DEFES-KSCSENPDGTSGDDGLEEDPNQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK 121

Query: 119 QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNA 178
           QRKELSRELGLEPLQVKFWFQNKRTQMK QHERHEN QLR EN+KLRA+NMRY+EAL  A
Sbjct: 122 QRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENAQLRAENDKLRAENMRYKEALGTA 181

Query: 179 SCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSR 238
           SCP+CGGP A+GEMSFDEHHLRLENARLR+EIDRIS IAAK+VGKP+V++P+LS P+ + 
Sbjct: 182 SCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISGIAAKHVGKPMVSFPVLSSPLAAA 241

Query: 239 ------PLELAVGNFGAQ---PGIGGGEMY---GAADLLRSISA-PTEADKPMIIELAVA 285
                 PL+LA G +G Q    G+G   +    GA DLLRS+SA   +ADKPMI+ELAVA
Sbjct: 242 AAAARSPLDLA-GAYGVQSAAAGLGADHVLFGAGAGDLLRSVSAGQLDADKPMIVELAVA 300

Query: 286 AMEELIRMAQMGEPLWM--TSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVV 343
           AM+EL+RMA+    LW    S       L+E+EYVRTFP G+GP+  G + EASR++AVV
Sbjct: 301 AMDELLRMARPDALLWGGGASAGAQQQQLDEEEYVRTFPAGLGPRQYGLRPEASRDSAVV 360

Query: 344 IMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLV 403
           IM   SL+EILMD N+++ VFS IVSRA T EVLSTGVAG+YNGALQVM+ EFQVPSPLV
Sbjct: 361 IMTCDSLIEILMDANRFAAVFSSIVSRASTHEVLSTGVAGSYNGALQVMSMEFQVPSPLV 420

Query: 404 PTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVE 463
           PTRESY+VRYCK + +GTWAVVDVSLD+LRPSP ++CRRRPSGCLIQEMPNGYSKVTWVE
Sbjct: 421 PTRESYFVRYCKNNPDGTWAVVDVSLDSLRPSPVIKCRRRPSGCLIQEMPNGYSKVTWVE 480

Query: 464 HVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDG 523
           HVEVDDR VHNLY+ LV++G AFGAKRWV TLDRQCERLAS MA+NIP G++GVIT+ +G
Sbjct: 481 HVEVDDRSVHNLYRPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPNGDLGVITSIEG 540

Query: 524 RKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAA 583
           RKSMLKLAERMV SFC GV+AS AH WTTLSG+GA+DVRVMTRKSVDDPGRPPGIVL+AA
Sbjct: 541 RKSMLKLAERMVASFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAA 600

Query: 584 TSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQS 643
           TSFWLPVPPKRVFDFLRDE +RSEWDILSNGG VQEMAHIANGRD GNCVSLLRVN   S
Sbjct: 601 TSFWLPVPPKRVFDFLRDETSRSEWDILSNGGAVQEMAHIANGRDHGNCVSLLRVN---S 657

Query: 644 ANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTS 703
           ANS+QSNMLILQESCTD + S+V+YAPVD+VAMNVVLNGGDPDYVALLPSGFAILPDG  
Sbjct: 658 ANSNQSNMLILQESCTDASGSYVVYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPP 717

Query: 704 LHGA-----NIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
             GA        +   GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIACTVERIKA++
Sbjct: 718 PAGAAPSHGEGLDTGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAV 777

Query: 759 SCES 762
             E+
Sbjct: 778 CAEA 781


>gi|162462636|ref|NP_001105127.1| outer cell layer5a [Zea mays]
 gi|8920427|emb|CAB96425.1| OCL5 protein [Zea mays]
          Length = 795

 Score = 1085 bits (2805), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 543/723 (75%), Positives = 612/723 (84%), Gaps = 29/723 (4%)

Query: 64  EEFDSTKSGSENHEGASGDD-----QEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK 118
           +EF+S KS SEN +G SGDD       QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK
Sbjct: 74  DEFES-KSCSENPDGTSGDDGLEEDPNQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK 132

Query: 119 QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNA 178
           QRKELSRELGLEPLQVKFWFQNKRTQMK QHERHEN QLR EN+KLRA+NMRY+EAL  A
Sbjct: 133 QRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENAQLRAENDKLRAENMRYKEALGTA 192

Query: 179 SCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPS- 237
           SCP+CGGP A+GEMSFDEHHLRLENARLR+EIDRIS IAAK+VGKP+V++P+LS P+ + 
Sbjct: 193 SCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISGIAAKHVGKPMVSFPVLSSPLAAA 252

Query: 238 ------RPLELAVGNFGAQ---PGIGGGEMYGAA--DLLRSISA-PTEADKPMIIELAVA 285
                  PL+LA G +G Q    G+G   ++GA   DLLRS+SA   +ADKPMI+ELAVA
Sbjct: 253 AAAAARSPLDLA-GAYGVQSAAAGLGADHLFGAGAGDLLRSVSAGQLDADKPMIVELAVA 311

Query: 286 AMEELIRMAQMGEPLWMTSLD-GTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVI 344
           AM+EL+RMA+    LW      G    L+E+EYVRTFP G+GP+  G + EASR++AVVI
Sbjct: 312 AMDELLRMARPDALLWGGGASAGAQQQLDEEEYVRTFPAGLGPRQYGLRPEASRDSAVVI 371

Query: 345 MNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVP 404
           M   SL+EILMD N+++ VFS IVSRA T EVLSTGVAG+YNGALQVM+ EFQVPSPLVP
Sbjct: 372 MTCDSLIEILMDANRFAAVFSSIVSRASTHEVLSTGVAGSYNGALQVMSMEFQVPSPLVP 431

Query: 405 TRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEH 464
           TRESY+VRYCK + +GTWAVVDVSLD+LRPSP ++CRRRPSGCLIQEMPNGYSKVTWVEH
Sbjct: 432 TRESYFVRYCKNNPDGTWAVVDVSLDSLRPSPVIKCRRRPSGCLIQEMPNGYSKVTWVEH 491

Query: 465 VEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGR 524
           VEVDDR VHNLY+ LV++G AFGAKRWV TLDRQCERLAS MA+NIP G++GVIT+ +GR
Sbjct: 492 VEVDDRSVHNLYRPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPNGDLGVITSIEGR 551

Query: 525 KSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAAT 584
           KSMLKLAERMV SFC GV+AS AH WTTLSG+GA+DVRVMTRKSVDDPGRPPGIVL+AAT
Sbjct: 552 KSMLKLAERMVASFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAAT 611

Query: 585 SFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSA 644
           SFWLPVPPKRVFDFLRDE +RSEWDILSNGG VQEMAHIANGRD GNCVSLLRVN   SA
Sbjct: 612 SFWLPVPPKRVFDFLRDETSRSEWDILSNGGAVQEMAHIANGRDHGNCVSLLRVN---SA 668

Query: 645 NSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSL 704
           NS+QSNMLILQESCTD + S+V+YAPVD+VAMNVVLNGGDPDYVALLPSGFAILPDG   
Sbjct: 669 NSNQSNMLILQESCTDASGSYVVYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPPP 728

Query: 705 HGA-----NIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
            GA        +A  GGSLLTVAFQILVDSVPT KLSLGSVATVN+LIACTVERIKA++ 
Sbjct: 729 AGAAPSHGEGLDAGGGGSLLTVAFQILVDSVPTGKLSLGSVATVNSLIACTVERIKAAVC 788

Query: 760 CES 762
            E+
Sbjct: 789 AEA 791


>gi|224028395|gb|ACN33273.1| unknown [Zea mays]
 gi|345194178|tpg|DAA34954.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413921155|gb|AFW61087.1| outer cell layer5a [Zea mays]
          Length = 796

 Score = 1083 bits (2800), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 543/724 (75%), Positives = 611/724 (84%), Gaps = 30/724 (4%)

Query: 64  EEFDSTKSGSENHEGASGDD-----QEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK 118
           +EF+S KS SEN +G SGDD       QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK
Sbjct: 74  DEFES-KSCSENPDGTSGDDGLEEDPNQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK 132

Query: 119 QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNA 178
           QRKELSRELGLEPLQVKFWFQNKRTQMK QHERHEN QLR EN+KLRA+NMRY+EAL  A
Sbjct: 133 QRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENAQLRAENDKLRAENMRYKEALGTA 192

Query: 179 SCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPS- 237
           SCP+CGGP A+GEMSFDEHHLRLENARLR+EIDRIS IAAK+VGKP+V++P+LS P+ + 
Sbjct: 193 SCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISGIAAKHVGKPMVSFPVLSSPLAAA 252

Query: 238 -----RPLELAVGNFGAQ---PGIGGGEMY---GAADLLRSISA-PTEADKPMIIELAVA 285
                 PL+LA G +G Q    G+G   +    GA DLLRS+SA   +ADKPMI+ELAVA
Sbjct: 253 AAAARSPLDLA-GAYGVQSAAAGLGADHVLFGAGAGDLLRSVSAGQLDADKPMIVELAVA 311

Query: 286 AMEELIRMAQMGEPLWM--TSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVV 343
           AM+EL+RMA+    LW    S       L+E+EYVRTFP G+GP+  G + EASR++AVV
Sbjct: 312 AMDELLRMARPDALLWGGGASAGAQQQQLDEEEYVRTFPAGLGPRQYGLRPEASRDSAVV 371

Query: 344 IMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLV 403
           IM   SL+EILMD N+++ VFS IVSRA T EVLSTGVAG+YNGALQVM+ EFQVPSPLV
Sbjct: 372 IMTCDSLIEILMDANRFAAVFSSIVSRASTHEVLSTGVAGSYNGALQVMSMEFQVPSPLV 431

Query: 404 PTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVE 463
           PTRESY+VRYCK + +GTWAVVDVSLD+LRPSP ++CRRRPSGCLIQEMPNGYSKVTWVE
Sbjct: 432 PTRESYFVRYCKNNPDGTWAVVDVSLDSLRPSPVIKCRRRPSGCLIQEMPNGYSKVTWVE 491

Query: 464 HVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDG 523
           HVEVDDR VHNLY+ LV++G AFGAKRWV TLDRQCERLAS MA+NIP G++GVIT+ +G
Sbjct: 492 HVEVDDRSVHNLYRPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPNGDLGVITSIEG 551

Query: 524 RKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAA 583
           RKSMLKLAERMV SFC GV+AS AH WTTLSG+GA+DVRVMTRKSVDDPGRPPGIVL+AA
Sbjct: 552 RKSMLKLAERMVASFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAA 611

Query: 584 TSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQS 643
           TSFWLPVPPKRVFDFLRDE +RSEWDILSNGG VQEMAHIANGRD GNCVSLLRVN   S
Sbjct: 612 TSFWLPVPPKRVFDFLRDETSRSEWDILSNGGAVQEMAHIANGRDHGNCVSLLRVN---S 668

Query: 644 ANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTS 703
           ANS+QSNMLILQESCTD + S+V+YAPVD+VAMNVVLNGGDPDYVALLPSGFAILPDG  
Sbjct: 669 ANSNQSNMLILQESCTDASGSYVVYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPP 728

Query: 704 LHGA-----NIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
             GA        +   GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIACTVERIKA++
Sbjct: 729 PAGAAPSHGEGLDTGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAV 788

Query: 759 SCES 762
             E+
Sbjct: 789 CAEA 792


>gi|345194180|tpg|DAA34955.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414585327|tpg|DAA35898.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 795

 Score = 1080 bits (2793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 566/799 (70%), Positives = 640/799 (80%), Gaps = 49/799 (6%)

Query: 5   VMIPARNMPST-IGRNGNVGGLGSSSGLTLSQPTNMMEGQL------------------- 44
           +MIPAR+MP T I RNG     GSSS L+L QP N+M+ Q                    
Sbjct: 1   MMIPARHMPPTMIVRNGG-AAYGSSSALSLGQP-NLMDNQQLQFQQALQQQHLLLDQIPA 58

Query: 45  ---HPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQE---QRPNKKKRYHRHT 98
                 D T        +    +EF+S KSGSEN +G S DDQ+   QRP+KKKRYHRHT
Sbjct: 59  TTAESCDNTGRGGGGRGSDPLADEFES-KSGSENVDGVSVDDQDDPNQRPSKKKRYHRHT 117

Query: 99  QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLR 158
            HQIQEMEAFFKECPHPDDKQRKELSRELGL PLQVKFWFQNKRTQMK QHER EN+QLR
Sbjct: 118 LHQIQEMEAFFKECPHPDDKQRKELSRELGLVPLQVKFWFQNKRTQMKNQHERQENSQLR 177

Query: 159 TENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAA 218
            ENEKLRA+NMRY+EALS+ASCPNCGGP A+GEMSFDEHHLR+ENARLREEIDRISAIAA
Sbjct: 178 AENEKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRVENARLREEIDRISAIAA 237

Query: 219 KYVGKPVVNYPLLSPPVP-SRPLELAVGNFGA----QPGIGGGEMYGAADLLRSISAPTE 273
           KYVGKP+V++P+LS P+  +RP  L + + G         G  +++G    + +  A  +
Sbjct: 238 KYVGKPMVSFPVLSSPLAGARPSPLDIDSGGVLGGAATYGGAADIFGGGGGVAACGAARD 297

Query: 274 ADKPMIIELAVAAMEELIRMAQMGEPLWMTSL---DGTAAVLNEDEYVRTF--PRGIG-P 327
            DKPMI+ELAV AMEEL+RMAQ+ EPLW       DG+A  LNE+EY R F    G+G  
Sbjct: 298 CDKPMIVELAVTAMEELVRMAQLDEPLWNAPAGGHDGSAETLNEEEYARMFVPAGGLGLK 357

Query: 328 KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNG 387
           K  GFK EASR+++VVIM H SLVEILMDVNQ++TVFS IVSRA TLEVLSTGVAGNYNG
Sbjct: 358 KQYGFKSEASRDSSVVIMTHASLVEILMDVNQYATVFSSIVSRAATLEVLSTGVAGNYNG 417

Query: 388 ALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGC 447
           ALQVM+ EFQVPSPLVPTR+SY+VRYCKQ+ +GTWAVVDVSLD    S  ++CRRRPSGC
Sbjct: 418 ALQVMSVEFQVPSPLVPTRDSYFVRYCKQNADGTWAVVDVSLDT---SSVLKCRRRPSGC 474

Query: 448 LIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMA 507
           LIQEMPNGYSKVTWVEHVEVDDR V+ +YK LV +G AFGA+RWV TLDRQCERLASVMA
Sbjct: 475 LIQEMPNGYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVGTLDRQCERLASVMA 534

Query: 508 TNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRK 567
           +NIPT ++GVIT+ +GRKSMLKLAERMV SFC GV+AS AH WTTLSG+GADDVRVMTRK
Sbjct: 535 SNIPTSDIGVITSTEGRKSMLKLAERMVTSFCGGVTASAAHQWTTLSGSGADDVRVMTRK 594

Query: 568 SVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGR 627
           SVDDPGRPPGIVL+AATSFWLP+ PKRVFDFLRDE++RSEWDILSNGGVVQEMAHIANGR
Sbjct: 595 SVDDPGRPPGIVLNAATSFWLPITPKRVFDFLRDESSRSEWDILSNGGVVQEMAHIANGR 654

Query: 628 DTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDY 687
           D GNCVSLLRVN  QS NS+QSNMLILQESCTD + S+VIYAPVD+VAMNVVLNGGDPDY
Sbjct: 655 DHGNCVSLLRVN--QSTNSTQSNMLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDY 712

Query: 688 VALLPSGFAILPDG----TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATV 743
           VALLPSGFAILPDG    +++ G   G   SGGSLLTVAFQILVDSVPTAKLSLGSVATV
Sbjct: 713 VALLPSGFAILPDGPSGSSNMQGGGGGGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATV 772

Query: 744 NNLIACTVERIKASLSCES 762
           N+LIA TVERIKA++S ES
Sbjct: 773 NSLIARTVERIKAAVSGES 791


>gi|413916965|gb|AFW56897.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 798

 Score = 1076 bits (2782), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/796 (69%), Positives = 629/796 (79%), Gaps = 49/796 (6%)

Query: 6   MIPARNMPSTIGRNGNVG-------GLGSSSGLTLSQPTNMMEGQLH------PLDMTQN 52
           M PAR MP+ IGRN  V         L  +  L         E QL        +D + N
Sbjct: 1   MTPARRMPAMIGRNNGVAFGSSSALSLSQADFLDSHHLQQAFEQQLFEQIPAAAVDSSDN 60

Query: 53  TSESEIARLREEEFDSTKSGSENHEG-ASGDDQE------QRPNKKKRYHRHTQHQIQEM 105
                   L  +EF+S KS SEN +G ASGDD +      QRPNKKKRYHRHTQHQI+EM
Sbjct: 61  IIHGRSDAL-VDEFES-KSCSENPDGTASGDDGQGDEDPNQRPNKKKRYHRHTQHQIEEM 118

Query: 106 EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLR 165
           EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK QHER EN QLR EN+KLR
Sbjct: 119 EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERQENAQLRAENDKLR 178

Query: 166 ADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPV 225
           A+NMRY++AL  ASCP+CGGP A+GEMSFDEHHLRLENARLR+EIDRIS IAAK+VGKP+
Sbjct: 179 AENMRYKDALGTASCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISGIAAKHVGKPM 238

Query: 226 VNYPLLSPPVPSR-PLELAVGNFGAQP------GIGGGEMYGAA--DLLRSISA-PTEAD 275
           V++P+LS P+ +R P +LA G +G QP            ++G A  DLLRS+SA    AD
Sbjct: 239 VSFPVLSSPLAARSPFDLA-GAYGVQPPGGGGGLGAADHLFGGAAGDLLRSVSAGQLSAD 297

Query: 276 KPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE 335
           K MI+ELAVAAM+EL+RMA++  PLW   + G    L+E+EY RTFP G+GP+  G + E
Sbjct: 298 KSMIVELAVAAMDELLRMARVDAPLWNGGVAGVPQQLDEEEYGRTFPGGLGPRQYGLRPE 357

Query: 336 ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 395
           ASR+ AVVIM   SLVEILMD N+++ VFS IVSRA T EVLSTGVAG+YNGALQVM+ E
Sbjct: 358 ASRDDAVVIMTRDSLVEILMDANRFAAVFSSIVSRASTHEVLSTGVAGSYNGALQVMSME 417

Query: 396 FQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNG 455
           FQVPSPLVPTRESY+ RYCK + +GTWAVVDVSLD+LRPSPA++CRRRPSGCL+QEMPNG
Sbjct: 418 FQVPSPLVPTRESYFARYCKNNPDGTWAVVDVSLDSLRPSPALKCRRRPSGCLVQEMPNG 477

Query: 456 YSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEV 515
           YSKVTWVEHVEVDDR VHNLY+ LV++G  FGA RWV TLDRQCERLAS MA+NIP G++
Sbjct: 478 YSKVTWVEHVEVDDRSVHNLYRPLVNSGLGFGATRWVGTLDRQCERLASAMASNIPNGDL 537

Query: 516 GVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRP 575
           GVIT+ +GRKSMLKLAERMV SFC GV+AS AH WTTLSG+GA+DVRVMTRKSVDDPGRP
Sbjct: 538 GVITSIEGRKSMLKLAERMVASFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVDDPGRP 597

Query: 576 PGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSL 635
           PGIVL+AATSFWLPVPPKRVFDFLRDE +RSEWDILSNGG VQEMAHIANGRD GNCVSL
Sbjct: 598 PGIVLNAATSFWLPVPPKRVFDFLRDETSRSEWDILSNGGAVQEMAHIANGRDHGNCVSL 657

Query: 636 LRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGF 695
           LRVN   SANS+QSNMLILQESCTD + S+V+YAPVD+VAMNVVLNGGDPDYVALLPSGF
Sbjct: 658 LRVN---SANSNQSNMLILQESCTDASGSYVVYAPVDVVAMNVVLNGGDPDYVALLPSGF 714

Query: 696 AILPDGTSLHG-------------ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVAT 742
           AILPDG    G                   A+GGSLLTVAFQILVDSVPTAKLSLGSVAT
Sbjct: 715 AILPDGPPAPGMAPHHGGEGAAGGGLEELEAAGGSLLTVAFQILVDSVPTAKLSLGSVAT 774

Query: 743 VNNLIACTVERIKASL 758
           VN+LIACTVERIKA++
Sbjct: 775 VNSLIACTVERIKAAV 790


>gi|345195184|tpg|DAA34957.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413919601|gb|AFW59533.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 742

 Score = 1074 bits (2778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/727 (74%), Positives = 608/727 (83%), Gaps = 41/727 (5%)

Query: 64  EEFDSTKSGSENHEGASGDDQ----EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQ 119
           +EF+S KSGSEN +G    D+     QRP+KKKRYHRHTQHQIQE+EAFFKECPHPDDKQ
Sbjct: 15  DEFES-KSGSENVDGGVSVDELQDPNQRPSKKKRYHRHTQHQIQELEAFFKECPHPDDKQ 73

Query: 120 RKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNAS 179
           RKELSRELGLEPLQVKFWFQNKRTQMK  HER EN+QLR+ENEKLRA+NMRY+EALS+AS
Sbjct: 74  RKELSRELGLEPLQVKFWFQNKRTQMKNHHERQENSQLRSENEKLRAENMRYKEALSSAS 133

Query: 180 CPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRP 239
           CP+CGGP A+GEMSFDEHHLR+ENARLREE+DRIS+IAAKYVG+P+V +P+LS      P
Sbjct: 134 CPSCGGPAALGEMSFDEHHLRVENARLREEVDRISSIAAKYVGRPMVPFPVLS-----SP 188

Query: 240 LELAVGNFGAQPGIGGGEMYGAAD--------------------LLRSISAPTEADKPMI 279
           L  A     A P +     YGAA                     LLR  +  ++ADKPMI
Sbjct: 189 LAGAGARAPALPPLDMAPPYGAAADMFGGGGVVAAAGAAGAGDLLLRGAAVQSDADKPMI 248

Query: 280 IELAVAAMEELIRMAQMGEPLWMT--SLDGTAAVLNEDE--YVRTFPRGIGPKPTGFKCE 335
           +ELAVAAMEEL+RMAQ+ EPLW     LDG+A     +E  Y R FP G+GPKP G   E
Sbjct: 249 VELAVAAMEELVRMAQLDEPLWNAPAGLDGSAEEETLNEEEYARLFPGGLGPKPYGLNSE 308

Query: 336 ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 395
           ASR++AVVIM H +LVEILMDVNQ++ VFS IVSRA TLEVLSTGVAGNYNGALQVM+ E
Sbjct: 309 ASRDSAVVIMTHANLVEILMDVNQYAAVFSSIVSRAATLEVLSTGVAGNYNGALQVMSVE 368

Query: 396 FQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNG 455
           FQVPSPLVPTRESY+VRYCKQ+ +GTWAVVDVSLD LRP   ++CRRRPSGCLIQEMPNG
Sbjct: 369 FQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDGLRPGAVLKCRRRPSGCLIQEMPNG 428

Query: 456 YSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEV 515
           YSKVTWVEHVEVDDR VH++YK LVS+G AFGA+RWV TLDRQCERLASVMA+NIPT ++
Sbjct: 429 YSKVTWVEHVEVDDRSVHSIYKLLVSSGLAFGARRWVGTLDRQCERLASVMASNIPTSDI 488

Query: 516 GVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRP 575
           GVIT+ +GRKSMLKLAERMV+SFC GV+AS AH WTTLSG+GA+DVRVMTRKSVDDPGRP
Sbjct: 489 GVITSAEGRKSMLKLAERMVMSFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVDDPGRP 548

Query: 576 PGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSL 635
           PGIVL+AATSFWLPVPPKRVFDFLRDE++RSEWDILSNGGVVQEMAHIANGRD GNCVSL
Sbjct: 549 PGIVLNAATSFWLPVPPKRVFDFLRDESSRSEWDILSNGGVVQEMAHIANGRDHGNCVSL 608

Query: 636 LRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGF 695
           LRVN   S NS+QS+MLILQESCTD + S+VIYAPVD+VAMNVVLNGGDPDYVALLPSGF
Sbjct: 609 LRVN---STNSNQSSMLILQESCTDMSGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGF 665

Query: 696 AILPDGTSLHGANIGE----AASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTV 751
           AILPDG S   +++ +      SGGSLLTVAFQILVDSVPTAK+SLGSVATVN+LIACTV
Sbjct: 666 AILPDGPSSGSSSMLQGDGGVGSGGSLLTVAFQILVDSVPTAKISLGSVATVNSLIACTV 725

Query: 752 ERIKASL 758
           ERIKA++
Sbjct: 726 ERIKAAV 732


>gi|326525997|dbj|BAJ93175.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 777

 Score = 1063 bits (2749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 550/791 (69%), Positives = 636/791 (80%), Gaps = 61/791 (7%)

Query: 5   VMIPARNMPST-IGRNGNVGGLGSSSGLTLSQPTNMMEG------QLHPLD--------- 48
           +MIPAR+MPS+ IGR+      GSSS L+L QP N+++G      Q H L+         
Sbjct: 1   MMIPARHMPSSMIGRSSGGAPYGSSSALSLGQP-NLLDGSNQHLLQHHLLEQIPVRAAES 59

Query: 49  ----MTQNTSESEIARLRE------EEFDSTKSGSENHEGASGD--DQEQRPN---KKKR 93
               +        + R RE      +EF+S +SGSEN +G + D  +Q+Q PN   +KKR
Sbjct: 60  GDNNIGSGGGGVGMIRGRESMDPLGDEFES-RSGSENVDGDAVDNAEQDQDPNQRPRKKR 118

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK QHERHE
Sbjct: 119 YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHE 178

Query: 154 NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRI 213
           N+QLR +N+KLRA+NMRY+EALS+ASCPNCGGP A+GEMSFDEHHLR+ENARLR+EIDRI
Sbjct: 179 NSQLRADNDKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRVENARLRDEIDRI 238

Query: 214 SAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMY-GAADLLRSISAPT 272
           SAIAAKYVGKP+V +P+LS P              A PG    +++ GAA +L++   P 
Sbjct: 239 SAIAAKYVGKPMVPFPVLSSP------------LAAAPGASAYDVFAGAASVLQA--PPD 284

Query: 273 EADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF--PRG-IGPKP 329
           +  + +++ELAVAAMEEL+RMA++ +PLW T++D T A L+E+EY R F  PRG +GPK 
Sbjct: 285 DKQQGVVVELAVAAMEELLRMARLDDPLWATTVDQTLA-LDEEEYARMFIDPRGGLGPKQ 343

Query: 330 TGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGAL 389
            G   EASR+  VVIM   SLVEILMDVNQ++ VFS IVSRA TLEVLSTGVAG Y+GAL
Sbjct: 344 YGLVPEASRDATVVIMTPASLVEILMDVNQYAAVFSSIVSRAATLEVLSTGVAGCYDGAL 403

Query: 390 QVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLI 449
           QVM+ EFQVPSPLVPTRESY+VRYCK++ +G WAVVDVSLD L+    V+CRRRPSGCLI
Sbjct: 404 QVMSVEFQVPSPLVPTRESYFVRYCKRNADGAWAVVDVSLDGLQ---GVKCRRRPSGCLI 460

Query: 450 QEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATN 509
           QE PNGYSKVTWVEHVEVDDR VHN+YK LV +G AFGA+RWV  L RQCERLAS MA+N
Sbjct: 461 QEAPNGYSKVTWVEHVEVDDRSVHNIYKPLVGSGLAFGARRWVGVLGRQCERLASAMASN 520

Query: 510 IPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSV 569
           IPT ++GVIT+ +GRKSMLKLAERMV SFC GV+AS AH WTTLSG+GA+DVRVMTRKSV
Sbjct: 521 IPTSDIGVITSSEGRKSMLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSV 580

Query: 570 DDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDT 629
           DDPGRPPGIVL+AATSFWLPVPPKRVFDFLRDE +RSEWDILSNGG+VQEMAHIANGRD 
Sbjct: 581 DDPGRPPGIVLNAATSFWLPVPPKRVFDFLRDETSRSEWDILSNGGIVQEMAHIANGRDH 640

Query: 630 GNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVA 689
           GNCVSLLRVN   S NS+QSNMLILQESCTD + S+VIYAPVD+VAMNVVLNGGDPDYVA
Sbjct: 641 GNCVSLLRVN---STNSNQSNMLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVA 697

Query: 690 LLPSGFAILPDGT--SLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLI 747
           LLPSGFAILPDG   ++H A  G   +GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LI
Sbjct: 698 LLPSGFAILPDGPAGTMH-AAAGATGTGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLI 756

Query: 748 ACTVERIKASL 758
           ACTVERIK ++
Sbjct: 757 ACTVERIKTAV 767


>gi|414585328|tpg|DAA35899.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 830

 Score = 1062 bits (2747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 566/834 (67%), Positives = 640/834 (76%), Gaps = 84/834 (10%)

Query: 5   VMIPARNMPST-IGRNGNVGGLGSSSGLTLSQPTNMMEGQL------------------- 44
           +MIPAR+MP T I RNG     GSSS L+L QP N+M+ Q                    
Sbjct: 1   MMIPARHMPPTMIVRNGG-AAYGSSSALSLGQP-NLMDNQQLQFQQALQQQHLLLDQIPA 58

Query: 45  ---HPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQE---QRPNKKKRYHRHT 98
                 D T        +    +EF+S KSGSEN +G S DDQ+   QRP+KKKRYHRHT
Sbjct: 59  TTAESCDNTGRGGGGRGSDPLADEFES-KSGSENVDGVSVDDQDDPNQRPSKKKRYHRHT 117

Query: 99  QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLR 158
            HQIQEMEAFFKECPHPDDKQRKELSRELGL PLQVKFWFQNKRTQMK QHER EN+QLR
Sbjct: 118 LHQIQEMEAFFKECPHPDDKQRKELSRELGLVPLQVKFWFQNKRTQMKNQHERQENSQLR 177

Query: 159 TENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAA 218
            ENEKLRA+NMRY+EALS+ASCPNCGGP A+GEMSFDEHHLR+ENARLREEIDRISAIAA
Sbjct: 178 AENEKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRVENARLREEIDRISAIAA 237

Query: 219 KYVGKPVVNYPLLSPPVP-SRPLELAVGNFGA----QPGIGGGEMYGAADLLRSISAPTE 273
           KYVGKP+V++P+LS P+  +RP  L + + G         G  +++G    + +  A  +
Sbjct: 238 KYVGKPMVSFPVLSSPLAGARPSPLDIDSGGVLGGAATYGGAADIFGGGGGVAACGAARD 297

Query: 274 ADKPMIIELAVAAMEELIRMAQMGEPLWMTSL---DGTAAVLNEDEYVRTF--PRGIG-P 327
            DKPMI+ELAV AMEEL+RMAQ+ EPLW       DG+A  LNE+EY R F    G+G  
Sbjct: 298 CDKPMIVELAVTAMEELVRMAQLDEPLWNAPAGGHDGSAETLNEEEYARMFVPAGGLGLK 357

Query: 328 KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNG 387
           K  GFK EASR+++VVIM H SLVEILMDVNQ++TVFS IVSRA TLEVLSTGVAGNYNG
Sbjct: 358 KQYGFKSEASRDSSVVIMTHASLVEILMDVNQYATVFSSIVSRAATLEVLSTGVAGNYNG 417

Query: 388 ALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGC 447
           ALQVM+ EFQVPSPLVPTR+SY+VRYCKQ+ +GTWAVVDVSLD    S  ++CRRRPSGC
Sbjct: 418 ALQVMSVEFQVPSPLVPTRDSYFVRYCKQNADGTWAVVDVSLDT---SSVLKCRRRPSGC 474

Query: 448 LIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMA 507
           LIQEMPNGYSKVTWVEHVEVDDR V+ +YK LV +G AFGA+RWV TLDRQCERLASVMA
Sbjct: 475 LIQEMPNGYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVGTLDRQCERLASVMA 534

Query: 508 TNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRK 567
           +NIPT ++GVIT+ +GRKSMLKLAERMV SFC GV+AS AH WTTLSG+GADDVRVMTRK
Sbjct: 535 SNIPTSDIGVITSTEGRKSMLKLAERMVTSFCGGVTASAAHQWTTLSGSGADDVRVMTRK 594

Query: 568 SVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSE-------------------- 607
           SVDDPGRPPGIVL+AATSFWLP+ PKRVFDFLRDE++RSE                    
Sbjct: 595 SVDDPGRPPGIVLNAATSFWLPITPKRVFDFLRDESSRSEARTRAPTHTQFFFNREHVLP 654

Query: 608 ---------------WDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNML 652
                          WDILSNGGVVQEMAHIANGRD GNCVSLLRVN  QS NS+QSNML
Sbjct: 655 SYEPPFLFFFFLFLQWDILSNGGVVQEMAHIANGRDHGNCVSLLRVN--QSTNSTQSNML 712

Query: 653 ILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG----TSLHGAN 708
           ILQESCTD + S+VIYAPVD+VAMNVVLNGGDPDYVALLPSGFAILPDG    +++ G  
Sbjct: 713 ILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPSGSSNMQGGG 772

Query: 709 IGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
            G   SGGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIA TVERIKA++S ES
Sbjct: 773 GGGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIARTVERIKAAVSGES 826


>gi|125591714|gb|EAZ32064.1| hypothetical protein OsJ_16252 [Oryza sativa Japonica Group]
          Length = 779

 Score = 1038 bits (2684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 531/716 (74%), Positives = 597/716 (83%), Gaps = 31/716 (4%)

Query: 64  EEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK 121
           +EF+S KSGSEN +G S DDQ+  QRP +KKRYHRHTQHQIQEMEAFFKECPHPDDKQRK
Sbjct: 75  DEFES-KSGSENVDGVSVDDQDPNQRP-RKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK 132

Query: 122 ELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCP 181
           ELSRELGLEPLQVKFWFQNKRTQMK QHERHEN+QLR++NEKLRA+NMRY+EALS+ASCP
Sbjct: 133 ELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKLRAENMRYKEALSSASCP 192

Query: 182 NCGGPTAIGEMSFDEHHLRLENARLREE-IDRISAIAAKYVG------KPVVNYPLLSPP 234
           NCGGP A+GEMSFDEHHLR+ENARLREE I     +  +  G      +P     +    
Sbjct: 193 NCGGPAALGEMSFDEHHLRIENARLREEDIGDRGEVRGEANGAVPGAVEPDGGGGVAGAA 252

Query: 235 VPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMA 294
            P R      G    +P   G    G           +E DKPMI+ELAVAAMEEL+RMA
Sbjct: 253 GPPRGAVRRTGRHVRRPVPRGSCCAGLQ---------SEVDKPMIVELAVAAMEELVRMA 303

Query: 295 QMGEPLWMTS--LDGTAA---VLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHIS 349
           Q+ EPLW  +  LD TAA    L+E+EY R FPRG+GPK  G + EASR++AVVIM H +
Sbjct: 304 QLDEPLWSVAPPLDATAAAMETLSEEEYARMFPRGLGPKQYGLRSEASRDSAVVIMTHAN 363

Query: 350 LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESY 409
           LVEILMD NQ++ VFS IVSRA+TLEVLSTGVAGNYNGALQVM+ EFQVPSPLVPTRESY
Sbjct: 364 LVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGALQVMSVEFQVPSPLVPTRESY 423

Query: 410 YVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 469
           +VRYCKQ+ +GTWAVVDVSLD+LRPSP ++CRRRPSGCLIQEMPNGYSKVTWVEHVEVDD
Sbjct: 424 FVRYCKQNADGTWAVVDVSLDSLRPSPVLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 483

Query: 470 RGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK 529
           R VHN+YK LV++G AFGA+RWV TLDRQCERLASVMA+NIPT ++GVIT+ +GRKSMLK
Sbjct: 484 RSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPTSDIGVITSSEGRKSMLK 543

Query: 530 LAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP 589
           LAERMV+SFC GV+AS AH WTTLSG+GA+DVRVMTRKSVDDPGRPPGIVL+AATSFWLP
Sbjct: 544 LAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLP 603

Query: 590 VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQS 649
           VPPKRVFDFLRDE++RSEWDILSNGG+VQEMAHIANGRD GNCVSLLRV    S+NS+QS
Sbjct: 604 VPPKRVFDFLRDESSRSEWDILSNGGIVQEMAHIANGRDQGNCVSLLRV---NSSNSNQS 660

Query: 650 NMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTS---LHG 706
           NMLILQESCTD + S+VIYAPVD+VAMNVVLNGGDPDYVALLPSGFAILPDG +     G
Sbjct: 661 NMLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPAHDGGDG 720

Query: 707 ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
                  SGGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIACTVERIKA++S ES
Sbjct: 721 DGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVSGES 776


>gi|38636822|dbj|BAD03062.1| putative OCL5 protein [Oryza sativa Japonica Group]
 gi|46390804|dbj|BAD16310.1| putative OCL5 protein [Oryza sativa Japonica Group]
          Length = 828

 Score = 1038 bits (2683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 541/774 (69%), Positives = 610/774 (78%), Gaps = 56/774 (7%)

Query: 5   VMIPARNM-PSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIARLRE 63
           +MIP RNM P+ IGR    GG G  +    S  + +  GQ         TSES+    R+
Sbjct: 81  MMIPGRNMSPAMIGRPNGGGGGGGVA--YASSSSALSLGQ------ATTTSESDGRAPRD 132

Query: 64  EEFDSTKSGSENHEGAS---------GDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPH 114
           E   S   GS+N E              D  QRP +KKRYHRHTQHQIQE+EAFFKECPH
Sbjct: 133 ELEMSKSGGSDNLESGGGGGGGGSGGDQDPNQRP-RKKRYHRHTQHQIQELEAFFKECPH 191

Query: 115 PDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREA 174
           PDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHEN  LR ENEKLRA+NMRY+EA
Sbjct: 192 PDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENNALRAENEKLRAENMRYKEA 251

Query: 175 LSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPP 234
           L+NASCPNCGGP AIGEMSFDEHHLRLENARLR+EIDRISAIAAKYVGKP        PP
Sbjct: 252 LANASCPNCGGPAAIGEMSFDEHHLRLENARLRDEIDRISAIAAKYVGKPAAAVSAAYPP 311

Query: 235 VPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMA 294
           +P  P   +  +    PG  G +++GA           + DKP++IELAVAAMEEL+RMA
Sbjct: 312 LP--PSNRSPLDHMGIPG-AGADVFGA-----------DFDKPLVIELAVAAMEELVRMA 357

Query: 295 QMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEIL 354
           Q+GEPLW  +L G A  L E+EY RTFPRG+GPK    + EASRETAVVIMNH+SLVE+L
Sbjct: 358 QLGEPLWAPALGGEA--LGEEEYARTFPRGLGPKSPELRSEASRETAVVIMNHVSLVEML 415

Query: 355 MDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYC 414
           MDV QW+ +FS IVSRA TLEVLSTGVAGN+NGALQ+M+AEFQ+PSPLVPTRE+ ++RYC
Sbjct: 416 MDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAEFQMPSPLVPTRETQFLRYC 475

Query: 415 KQHGEGTWAVVDVSLDNLR--------PSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVE 466
           KQH +GTWAVVDVSLD LR        P+ A   RRRPSGCLIQEMPNGYSKVTWVEHVE
Sbjct: 476 KQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRRPSGCLIQEMPNGYSKVTWVEHVE 535

Query: 467 VDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIP-TGEVGVITNQDGRK 525
            DD+ VHNLYK +V++G AFGA+RWVATL+RQCERLAS MA+N+  +G+ GVIT  +GR+
Sbjct: 536 ADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLASAMASNVASSGDAGVITTSEGRR 595

Query: 526 SMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATS 585
           SMLKLAERMV SFC GV+AST H WTTLSG+GA+DVRVMTRKSVDDPGRPPGI+L+AATS
Sbjct: 596 SMLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIILNAATS 655

Query: 586 FWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSAN 645
           FWLPVPP RVFDFLRD++TRSEWDILSNGGVVQEMAHIANGRD GN VSLLRVN   +AN
Sbjct: 656 FWLPVPPSRVFDFLRDDSTRSEWDILSNGGVVQEMAHIANGRDHGNAVSLLRVN---NAN 712

Query: 646 SSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH 705
           S+QSNMLILQE CTD T S+VIYAPVD+VAMNVVLNGGDPDYVALLPSGFAIL       
Sbjct: 713 SNQSNMLILQECCTDATGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL------- 765

Query: 706 GANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
               G    GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIACTVERIKA+++
Sbjct: 766 --PDGPDGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAIT 817


>gi|325260819|gb|ADZ04638.1| hypothetical protein [Oryza glaberrima]
          Length = 778

 Score = 1037 bits (2681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/725 (72%), Positives = 593/725 (81%), Gaps = 47/725 (6%)

Query: 53  TSESEIARLREEEFDSTKSGSENHEGASG-------DDQE--QRPNKKKRYHRHTQHQIQ 103
           TSES+    R+E   S   GS+N E   G       DDQ+  QRP +KKRYHRHTQHQIQ
Sbjct: 72  TSESDGRAPRDELEMSKSGGSDNLESGGGGGGGGSGDDQDPNQRP-RKKRYHRHTQHQIQ 130

Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEK 163
           E+EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHEN  LR ENEK
Sbjct: 131 ELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENNALRAENEK 190

Query: 164 LRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGK 223
           LRA+NMRY+EAL+NASCPNCGGP AIGEMSFDEHHLRLENARLR+EIDRISAIAAKYVGK
Sbjct: 191 LRAENMRYKEALANASCPNCGGPAAIGEMSFDEHHLRLENARLRDEIDRISAIAAKYVGK 250

Query: 224 PVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELA 283
           P        PP+P  P   +  +    PG  G +++GA           + DKP++IELA
Sbjct: 251 PAAAVSAAYPPLP--PSNRSPLDHMGIPG-AGADVFGA-----------DFDKPLVIELA 296

Query: 284 VAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVV 343
           VAAMEELIRMAQ+GEPLW  +L G A  L E+EY RTFPRG+GPK    + EASRETAVV
Sbjct: 297 VAAMEELIRMAQLGEPLWAPALGGEA--LGEEEYARTFPRGLGPKSPELRSEASRETAVV 354

Query: 344 IMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLV 403
           IMNH+SLVE+LMDV QW+ +FS IVSRA TLEVLSTGVAGN+NGALQ+M+AEFQ+PSPLV
Sbjct: 355 IMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAEFQMPSPLV 414

Query: 404 PTRESYYVRYCKQHGEGTWAVVDVSLDNLR--------PSPAVRCRRRPSGCLIQEMPNG 455
           PTRE+ ++RYCKQH +GTWAVVDVSLD LR        P+ A   RRRPSGCLIQEMPNG
Sbjct: 415 PTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRRPSGCLIQEMPNG 474

Query: 456 YSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIP-TGE 514
           YSKVTWVEHVE DD+ VHNLYK +V++G AFGA+RWVATL+RQCERLAS MA+N+  +G+
Sbjct: 475 YSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLASAMASNVASSGD 534

Query: 515 VGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGR 574
            GVIT  +GR+SMLKLAERMV SFC GV+AST H WTTLSG+GA+DVRVMTRKSVDDPGR
Sbjct: 535 AGVITTSEGRRSMLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDVRVMTRKSVDDPGR 594

Query: 575 PPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVS 634
           PPGI+L+AATSFWLPVPP RVFDFLRD++TRSEWDILSNGGVVQEMAHIANGRD GN VS
Sbjct: 595 PPGIILNAATSFWLPVPPSRVFDFLRDDSTRSEWDILSNGGVVQEMAHIANGRDHGNAVS 654

Query: 635 LLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
           LLRVN   +ANS+QSNMLILQE CTD T S+VIYAPVD+VAMNVVLNGGDPDYVALLPSG
Sbjct: 655 LLRVN---NANSNQSNMLILQECCTDATGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSG 711

Query: 695 FAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERI 754
           FAIL           G    GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIACTVERI
Sbjct: 712 FAIL---------PDGPDGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERI 762

Query: 755 KASLS 759
           KA+++
Sbjct: 763 KAAIT 767


>gi|187611405|sp|A2YR02.1|ROC7_ORYSI RecName: Full=Homeobox-leucine zipper protein ROC7; AltName:
           Full=GLABRA 2-like homeobox protein 7; AltName:
           Full=HD-ZIP protein ROC7; AltName: Full=Homeodomain
           transcription factor ROC7; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 7
          Length = 749

 Score = 1037 bits (2681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/725 (72%), Positives = 593/725 (81%), Gaps = 47/725 (6%)

Query: 53  TSESEIARLREEEFDSTKSGSENHEGASG-------DDQE--QRPNKKKRYHRHTQHQIQ 103
           TSES+    R+E   S   GS+N E   G       DDQ+  QRP +KKRYHRHTQHQIQ
Sbjct: 43  TSESDGRAPRDELEMSKSGGSDNLESGGGGGGGGSGDDQDPNQRP-RKKRYHRHTQHQIQ 101

Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEK 163
           E+EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHEN  LR ENEK
Sbjct: 102 ELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENNALRAENEK 161

Query: 164 LRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGK 223
           LRA+NMRY+EAL+NASCPNCGGP AIGEMSFDEHHLRLENARLR+EIDRISAIAAKYVGK
Sbjct: 162 LRAENMRYKEALANASCPNCGGPAAIGEMSFDEHHLRLENARLRDEIDRISAIAAKYVGK 221

Query: 224 PVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELA 283
           P        PP+P  P   +  +    PG  G +++GA           + DKP++IELA
Sbjct: 222 PAAAVSAAYPPLP--PSNRSPLDHMGIPG-AGADVFGA-----------DFDKPLVIELA 267

Query: 284 VAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVV 343
           VAAMEEL+RMAQ+GEPLW  +L G A  L E+EY RTFPRG+GPK    + EASRETAVV
Sbjct: 268 VAAMEELVRMAQLGEPLWAPALGGEA--LGEEEYARTFPRGLGPKSPELRSEASRETAVV 325

Query: 344 IMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLV 403
           IMNH+SLVE+LMDV QW+ +FS IVSRA TLEVLSTGVAGN+NGALQ+M+AEFQ+PSPLV
Sbjct: 326 IMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAEFQMPSPLV 385

Query: 404 PTRESYYVRYCKQHGEGTWAVVDVSLDNLR--------PSPAVRCRRRPSGCLIQEMPNG 455
           PTRE+ ++RYCKQH +GTWAVVDVSLD LR        P+ A   RRRPSGCLIQEMPNG
Sbjct: 386 PTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRRPSGCLIQEMPNG 445

Query: 456 YSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIP-TGE 514
           YSKVTWVEHVE DD+ VHNLYK +V++G AFGA+RWVATL+RQCERLAS MA+N+  +G+
Sbjct: 446 YSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLASAMASNVASSGD 505

Query: 515 VGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGR 574
            GVIT  +GR+SMLKLAERMV SFC GV+AST H WTTLSG+GA+DVRVMTRKSVDDPGR
Sbjct: 506 AGVITTSEGRRSMLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDVRVMTRKSVDDPGR 565

Query: 575 PPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVS 634
           PPGIVL+AATSFWLPVPP RVFDFLRD++TRSEWDILSNGGVVQEMAHIANGRD GN VS
Sbjct: 566 PPGIVLNAATSFWLPVPPSRVFDFLRDDSTRSEWDILSNGGVVQEMAHIANGRDHGNAVS 625

Query: 635 LLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
           LLRVN   +ANS+QSNMLILQE CTD T S+VIYAPVD+VAMNVVLNGGDPDYVALLPSG
Sbjct: 626 LLRVN---NANSNQSNMLILQECCTDATGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSG 682

Query: 695 FAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERI 754
           FAIL           G    GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIACTVERI
Sbjct: 683 FAIL---------PDGPDGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERI 733

Query: 755 KASLS 759
           KA+++
Sbjct: 734 KAAIT 738


>gi|218200438|gb|EEC82865.1| hypothetical protein OsI_27729 [Oryza sativa Indica Group]
          Length = 785

 Score = 1036 bits (2680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/725 (72%), Positives = 593/725 (81%), Gaps = 47/725 (6%)

Query: 53  TSESEIARLREEEFDSTKSGSENHEGASG-------DDQE--QRPNKKKRYHRHTQHQIQ 103
           TSES+    R+E   S   GS+N E   G       DDQ+  QRP +KKRYHRHTQHQIQ
Sbjct: 79  TSESDGRAPRDELEMSKSGGSDNLESGGGGGGGGSGDDQDPNQRP-RKKRYHRHTQHQIQ 137

Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEK 163
           E+EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHEN  LR ENEK
Sbjct: 138 ELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENNALRAENEK 197

Query: 164 LRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGK 223
           LRA+NMRY+EAL+NASCPNCGGP AIGEMSFDEHHLRLENARLR+EIDRISAIAAKYVGK
Sbjct: 198 LRAENMRYKEALANASCPNCGGPAAIGEMSFDEHHLRLENARLRDEIDRISAIAAKYVGK 257

Query: 224 PVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELA 283
           P        PP+P  P   +  +    PG  G +++GA           + DKP++IELA
Sbjct: 258 PAAAVSAAYPPLP--PSNRSPLDHMGIPG-AGADVFGA-----------DFDKPLVIELA 303

Query: 284 VAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVV 343
           VAAMEEL+RMAQ+GEPLW  +L G A  L E+EY RTFPRG+GPK    + EASRETAVV
Sbjct: 304 VAAMEELVRMAQLGEPLWAPALGGEA--LGEEEYARTFPRGLGPKSPELRSEASRETAVV 361

Query: 344 IMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLV 403
           IMNH+SLVE+LMDV QW+ +FS IVSRA TLEVLSTGVAGN+NGALQ+M+AEFQ+PSPLV
Sbjct: 362 IMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAEFQMPSPLV 421

Query: 404 PTRESYYVRYCKQHGEGTWAVVDVSLDNLR--------PSPAVRCRRRPSGCLIQEMPNG 455
           PTRE+ ++RYCKQH +GTWAVVDVSLD LR        P+ A   RRRPSGCLIQEMPNG
Sbjct: 422 PTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRRPSGCLIQEMPNG 481

Query: 456 YSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIP-TGE 514
           YSKVTWVEHVE DD+ VHNLYK +V++G AFGA+RWVATL+RQCERLAS MA+N+  +G+
Sbjct: 482 YSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLASAMASNVASSGD 541

Query: 515 VGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGR 574
            GVIT  +GR+SMLKLAERMV SFC GV+AST H WTTLSG+GA+DVRVMTRKSVDDPGR
Sbjct: 542 AGVITTSEGRRSMLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDVRVMTRKSVDDPGR 601

Query: 575 PPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVS 634
           PPGIVL+AATSFWLPVPP RVFDFLRD++TRSEWDILSNGGVVQEMAHIANGRD GN VS
Sbjct: 602 PPGIVLNAATSFWLPVPPSRVFDFLRDDSTRSEWDILSNGGVVQEMAHIANGRDHGNAVS 661

Query: 635 LLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
           LLRVN   +ANS+QSNMLILQE CTD T S+VIYAPVD+VAMNVVLNGGDPDYVALLPSG
Sbjct: 662 LLRVN---NANSNQSNMLILQECCTDATGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSG 718

Query: 695 FAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERI 754
           FAIL           G    GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIACTVERI
Sbjct: 719 FAIL---------PDGPDGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERI 769

Query: 755 KASLS 759
           KA+++
Sbjct: 770 KAAIT 774


>gi|218200586|gb|EEC83013.1| hypothetical protein OsI_28071 [Oryza sativa Indica Group]
          Length = 765

 Score = 1036 bits (2680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/716 (74%), Positives = 602/716 (84%), Gaps = 40/716 (5%)

Query: 64  EEFDSTKSGSENHEGA----SGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           +EF+S KS SEN +GA    SGDDQ+  QRP +KKRYHRHTQHQIQEMEAFFKECPHPDD
Sbjct: 70  DEFES-KSCSENVDGAGDGLSGDDQDPNQRP-RKKRYHRHTQHQIQEMEAFFKECPHPDD 127

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSN 177
           KQRKELSRELGLEPLQ              QHERHEN QLR EN+KLRA+NMRY+EA+S+
Sbjct: 128 KQRKELSRELGLEPLQ-------------NQHERHENAQLRAENDKLRAENMRYKEAVSS 174

Query: 178 ASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKP-VVNYPLLSPPVP 236
           ASCP    P A+GEMSFDEHHLR+E ARLR+EIDRIS IAAK+VGKP +V++P+LS P+ 
Sbjct: 175 ASCPIAVVPPALGEMSFDEHHLRVEYARLRDEIDRISGIAAKHVGKPPIVSFPVLSSPLA 234

Query: 237 ----SRPLELAVGNFGA-QPGIGGGEMYGAA-DLLRSISAPTEADKPMIIELAVAAMEEL 290
                 PL+LA G +G   PG+   +M+G A DLLR +  P +ADKPMI+ELAVAAM+EL
Sbjct: 235 VAAARSPLDLA-GAYGVVTPGL---DMFGGAGDLLRGVH-PLDADKPMIVELAVAAMDEL 289

Query: 291 IRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISL 350
           ++MAQ+ EPLW +S +  AA+L+E+EY R FPRG+GPK  G K EASR  AVVIM H +L
Sbjct: 290 VQMAQLDEPLWSSSSEPAAALLDEEEYARMFPRGLGPKQYGLKSEASRHGAVVIMTHSNL 349

Query: 351 VEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYY 410
           VEILMDVNQ++TVFS IVSRA T EVLSTGVAGNYNGALQVM+ EFQVPSPLVPTRESY+
Sbjct: 350 VEILMDVNQFATVFSSIVSRASTHEVLSTGVAGNYNGALQVMSMEFQVPSPLVPTRESYF 409

Query: 411 VRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR 470
           VRYCK + +GTWAVVDVSLD+LRPSP  +CRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 
Sbjct: 410 VRYCKNNSDGTWAVVDVSLDSLRPSPVQKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDS 469

Query: 471 GVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKL 530
            VHN+YK LV++G AFGAKRWV TLDRQCERLAS MA+NIP G++GVIT+ +GRKSMLKL
Sbjct: 470 SVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPNGDLGVITSVEGRKSMLKL 529

Query: 531 AERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPV 590
           AERMV SFC GV+AS AH WTTLSG+GA+DVRVMTRKSVDDPGRPPGIVL+AATSFWLPV
Sbjct: 530 AERMVASFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLPV 589

Query: 591 PPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSN 650
           PP  VFDFLRDE +RSEWDILSNGG VQEMAHIANGRD GN VSLLRVN   SANS+QSN
Sbjct: 590 PPTAVFDFLRDETSRSEWDILSNGGAVQEMAHIANGRDHGNSVSLLRVN---SANSNQSN 646

Query: 651 MLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHG-ANI 709
           MLILQESCTD + S+V+YAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG S +  A +
Sbjct: 647 MLILQESCTDASGSYVVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGPSGNAQAAV 706

Query: 710 GE---AASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           GE    + GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIACTVERIKA++  +S
Sbjct: 707 GENGSGSGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVCRDS 762


>gi|357144757|ref|XP_003573403.1| PREDICTED: homeobox-leucine zipper protein ROC1-like [Brachypodium
           distachyon]
          Length = 812

 Score = 1036 bits (2679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 550/814 (67%), Positives = 632/814 (77%), Gaps = 72/814 (8%)

Query: 6   MIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQ-----------LHPLDMTQNTS 54
           M PAR +P  IGRNG     GS S L+LSQ  ++++                +  T +T 
Sbjct: 1   MTPARRLPPMIGRNGV--AYGSPSALSLSQ-ADLLDSHHLQQALIQQQLYEQIPATMSTP 57

Query: 55  ESEIARLRE-------EEFDSTKSGSENH-------------------EGASGDDQEQRP 88
            + +  +         +E +S KS SEN+                         D  QRP
Sbjct: 58  GAVVNHMHNLHGMPAPDELES-KSCSENNGADADADGTGGGGGSGGEEGEGEEQDPNQRP 116

Query: 89  NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
            KKKRYHRHTQHQIQE+EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK Q
Sbjct: 117 RKKKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQ 176

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
           HE+ EN+QLR EN+KLRA+NMRY+EALS+ASCP+CGGP A+GEMSFDEHHLR++NARLR+
Sbjct: 177 HEKQENSQLRAENDKLRAENMRYKEALSSASCPSCGGPAALGEMSFDEHHLRVDNARLRD 236

Query: 209 EIDRISAIAAKYV---GKPV-------------VNYPLLSPPVPSR-PLELAVGNFGAQP 251
           EIDRISAIAAK+V   GKP+              ++  LSP V +R PL+L VG +G   
Sbjct: 237 EIDRISAIAAKHVAATGKPMPFPMPMAGLSSSAASFHGLSPAVAARSPLDL-VGAYGGG- 294

Query: 252 GIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAV 311
           G   G   GA DL+RS     + DKP+I+ELAVAAM+EL++MA++ EPLW +S  G AA 
Sbjct: 295 GDMFGGGAGAGDLMRS-HGLGDVDKPLIVELAVAAMDELLQMARVDEPLWSSSATGEAA- 352

Query: 312 LNEDEYVRTF-PRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSR 370
           L E+EY R +  RG+GP+  G K EASR   VVIM H SLVEILMDVNQ++TVFS IVSR
Sbjct: 353 LEEEEYGRVYGARGLGPRQYGLKPEASRGANVVIMTHASLVEILMDVNQFATVFSSIVSR 412

Query: 371 AMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLD 430
           A T EVLSTGVAGNY+GALQVM+ EFQVPSPLVPTRESY+VRYCK + EG+WAVVDVSLD
Sbjct: 413 ASTHEVLSTGVAGNYDGALQVMSMEFQVPSPLVPTRESYFVRYCKHNPEGSWAVVDVSLD 472

Query: 431 NLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKR 490
           +LRPSPAV+CRRRPSGCLIQE+PNGYSKVTWVEHVEVDDR VH++YK LV++G AFGAKR
Sbjct: 473 SLRPSPAVKCRRRPSGCLIQELPNGYSKVTWVEHVEVDDRSVHDIYKPLVNSGLAFGAKR 532

Query: 491 WVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTW 550
           WV TL RQCERLAS MA++IP G++GVIT+ +GRKSMLKLAERMV SFC GV+AS AH W
Sbjct: 533 WVGTLGRQCERLASAMASSIPNGDLGVITSVEGRKSMLKLAERMVASFCGGVTASVAHQW 592

Query: 551 TTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDI 610
           TTLSG+GA+DVRVMTRKSVDDPGRPPGIVL+AATSFWLPV P  VFDFLRDE +RSEWDI
Sbjct: 593 TTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLPVSPNTVFDFLRDETSRSEWDI 652

Query: 611 LSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPT-ASFVIYA 669
           LSNGG+VQEMAHIANGRD GNCVSLLRVN   SANS+QSNMLILQESCTD + +S+V+YA
Sbjct: 653 LSNGGIVQEMAHIANGRDHGNCVSLLRVN---SANSNQSNMLILQESCTDESGSSYVVYA 709

Query: 670 PVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGE-----AASGGSLLTVAFQ 724
           PVDIVAMNVVLNGGDPDYVALLPSGFAILPDG S   + I E     A  GGSLLTVAFQ
Sbjct: 710 PVDIVAMNVVLNGGDPDYVALLPSGFAILPDGPSAPLSGINEEGGVAAGKGGSLLTVAFQ 769

Query: 725 ILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           ILVDSVPTAKLSLGSVATVN+LIACTVERIKA++
Sbjct: 770 ILVDSVPTAKLSLGSVATVNSLIACTVERIKAAV 803


>gi|187611406|sp|A3BPF2.1|ROC7_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC7; AltName:
           Full=GLABRA 2-like homeobox protein 7; AltName:
           Full=HD-ZIP protein ROC7; AltName: Full=Homeodomain
           transcription factor ROC7; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 7
          Length = 749

 Score = 1035 bits (2675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/725 (72%), Positives = 589/725 (81%), Gaps = 47/725 (6%)

Query: 53  TSESEIARLREEEFDSTKSGSENHEGAS---------GDDQEQRPNKKKRYHRHTQHQIQ 103
           TSES+    R+E   S   GS+N E              D  QRP +KKRYHRHTQHQIQ
Sbjct: 43  TSESDGRAPRDELEMSKSGGSDNLESGGGGGGGGSGGDQDPNQRP-RKKRYHRHTQHQIQ 101

Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEK 163
           E+EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHEN  LR ENEK
Sbjct: 102 ELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENNALRAENEK 161

Query: 164 LRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGK 223
           LRA+NMRY+EAL+NASCPNCGGP AIGEMSFDEHHLRLENARLR+EIDRISAIAAKYVGK
Sbjct: 162 LRAENMRYKEALANASCPNCGGPAAIGEMSFDEHHLRLENARLRDEIDRISAIAAKYVGK 221

Query: 224 PVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELA 283
           P        PP+P  P   +  +    PG  G +++GA           + DKP++IELA
Sbjct: 222 PAAAVSAAYPPLP--PSNRSPLDHMGIPG-AGADVFGA-----------DFDKPLVIELA 267

Query: 284 VAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVV 343
           VAAMEEL+RMAQ+GEPLW  +L G A  L E+EY RTFPRG+GPK    + EASRETAVV
Sbjct: 268 VAAMEELVRMAQLGEPLWAPALGGEA--LGEEEYARTFPRGLGPKSPELRSEASRETAVV 325

Query: 344 IMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLV 403
           IMNH+SLVE+LMDV QW+ +FS IVSRA TLEVLSTGVAGN+NGALQ+M+AEFQ+PSPLV
Sbjct: 326 IMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAEFQMPSPLV 385

Query: 404 PTRESYYVRYCKQHGEGTWAVVDVSLDNLR--------PSPAVRCRRRPSGCLIQEMPNG 455
           PTRE+ ++RYCKQH +GTWAVVDVSLD LR        P+ A   RRRPSGCLIQEMPNG
Sbjct: 386 PTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRRPSGCLIQEMPNG 445

Query: 456 YSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIP-TGE 514
           YSKVTWVEHVE DD+ VHNLYK +V++G AFGA+RWVATL+RQCERLAS MA+N+  +G+
Sbjct: 446 YSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLASAMASNVASSGD 505

Query: 515 VGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGR 574
            GVIT  +GR+SMLKLAERMV SFC GV+AST H WTTLSG+GA+DVRVMTRKSVDDPGR
Sbjct: 506 AGVITTSEGRRSMLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDVRVMTRKSVDDPGR 565

Query: 575 PPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVS 634
           PPGI+L+AATSFWLPVPP RVFDFLRD++TRSEWDILSNGGVVQEMAHIANGRD GN VS
Sbjct: 566 PPGIILNAATSFWLPVPPSRVFDFLRDDSTRSEWDILSNGGVVQEMAHIANGRDHGNAVS 625

Query: 635 LLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
           LLRVN   +ANS+QSNMLILQE CTD T S+VIYAPVD+VAMNVVLNGGDPDYVALLPSG
Sbjct: 626 LLRVN---NANSNQSNMLILQECCTDATGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSG 682

Query: 695 FAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERI 754
           FAIL           G    GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIACTVERI
Sbjct: 683 FAIL---------PDGPDGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERI 733

Query: 755 KASLS 759
           KA+++
Sbjct: 734 KAAIT 738


>gi|222639874|gb|EEE68006.1| hypothetical protein OsJ_25963 [Oryza sativa Japonica Group]
          Length = 785

 Score = 1034 bits (2673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/725 (72%), Positives = 589/725 (81%), Gaps = 47/725 (6%)

Query: 53  TSESEIARLREEEFDSTKSGSENHEGAS---------GDDQEQRPNKKKRYHRHTQHQIQ 103
           TSES+    R+E   S   GS+N E              D  QRP +KKRYHRHTQHQIQ
Sbjct: 79  TSESDGRAPRDELEMSKSGGSDNLESGGGGGGGGSGGDQDPNQRP-RKKRYHRHTQHQIQ 137

Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEK 163
           E+EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHEN  LR ENEK
Sbjct: 138 ELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENNALRAENEK 197

Query: 164 LRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGK 223
           LRA+NMRY+EAL+NASCPNCGGP AIGEMSFDEHHLRLENARLR+EIDRISAIAAKYVGK
Sbjct: 198 LRAENMRYKEALANASCPNCGGPAAIGEMSFDEHHLRLENARLRDEIDRISAIAAKYVGK 257

Query: 224 PVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELA 283
           P        PP+P  P   +  +    PG  G +++GA           + DKP++IELA
Sbjct: 258 PAAAVSAAYPPLP--PSNRSPLDHMGIPG-AGADVFGA-----------DFDKPLVIELA 303

Query: 284 VAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVV 343
           VAAMEEL+RMAQ+GEPLW  +L G A  L E+EY RTFPRG+GPK    + EASRETAVV
Sbjct: 304 VAAMEELVRMAQLGEPLWAPALGGEA--LGEEEYARTFPRGLGPKSPELRSEASRETAVV 361

Query: 344 IMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLV 403
           IMNH+SLVE+LMDV QW+ +FS IVSRA TLEVLSTGVAGN+NGALQ+M+AEFQ+PSPLV
Sbjct: 362 IMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAEFQMPSPLV 421

Query: 404 PTRESYYVRYCKQHGEGTWAVVDVSLDNLR--------PSPAVRCRRRPSGCLIQEMPNG 455
           PTRE+ ++RYCKQH +GTWAVVDVSLD LR        P+ A   RRRPSGCLIQEMPNG
Sbjct: 422 PTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRRPSGCLIQEMPNG 481

Query: 456 YSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIP-TGE 514
           YSKVTWVEHVE DD+ VHNLYK +V++G AFGA+RWVATL+RQCERLAS MA+N+  +G+
Sbjct: 482 YSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLASAMASNVASSGD 541

Query: 515 VGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGR 574
            GVIT  +GR+SMLKLAERMV SFC GV+AST H WTTLSG+GA+DVRVMTRKSVDDPGR
Sbjct: 542 AGVITTSEGRRSMLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDVRVMTRKSVDDPGR 601

Query: 575 PPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVS 634
           PPGI+L+AATSFWLPVPP RVFDFLRD++TRSEWDILSNGGVVQEMAHIANGRD GN VS
Sbjct: 602 PPGIILNAATSFWLPVPPSRVFDFLRDDSTRSEWDILSNGGVVQEMAHIANGRDHGNAVS 661

Query: 635 LLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
           LLRVN   +ANS+QSNMLILQE CTD T S+VIYAPVD+VAMNVVLNGGDPDYVALLPSG
Sbjct: 662 LLRVN---NANSNQSNMLILQECCTDATGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSG 718

Query: 695 FAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERI 754
           FAIL           G    GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIACTVERI
Sbjct: 719 FAIL---------PDGPDGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERI 769

Query: 755 KASLS 759
           KA+++
Sbjct: 770 KAAIT 774


>gi|357166100|ref|XP_003580598.1| PREDICTED: homeobox-leucine zipper protein ROC2-like [Brachypodium
           distachyon]
          Length = 787

 Score = 1013 bits (2619), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/806 (66%), Positives = 615/806 (76%), Gaps = 68/806 (8%)

Query: 5   VMIPARNMPST-IGRNGNVG------------GLGSSSGLTLSQPTNMMEGQLHPLDMTQ 51
           +MIP R+MPS+ IGR+                 L  S+   L     ++  Q+    M +
Sbjct: 1   MMIPVRHMPSSMIGRSSAAYGSSSSALSLGQPNLLDSNHQQLHHHQALLNHQIPAPAMAE 60

Query: 52  ---NTSESEIARLREE----EFDSTKSGSENHEGASGDDQEQ-------RPNKKKRYHRH 97
              N+    + R R E    +F+S +SGSEN +G   +D+ Q       RP K+ RYHRH
Sbjct: 61  SSDNSGRRSMVRRRSEPLGEDFES-RSGSENVDGDGVEDELQQQADPNKRPRKQNRYHRH 119

Query: 98  TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           TQHQIQEMEAF+KEC HPDDKQRKELSRELGLEPLQVKFWFQNKRTQ K Q ERHEN+QL
Sbjct: 120 TQHQIQEMEAFYKECQHPDDKQRKELSRELGLEPLQVKFWFQNKRTQTKNQQERHENSQL 179

Query: 158 RTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIA 217
           R EN+KLRA+NMRY+EALS+ASCP+CGGP A+GEMSFDEHHLRLENARLR+EIDRISAIA
Sbjct: 180 RGENDKLRAENMRYKEALSSASCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISAIA 239

Query: 218 AKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL-LRSISAPTEADK 276
           AKYVGKP V +P+LS P+       AVG +G      G +M+G     +R      + +K
Sbjct: 240 AKYVGKPAVPFPVLSNPLA------AVGAYGHHHL--GADMFGELQQPMRPTGGAGDQNK 291

Query: 277 PMIIELAVAAMEELIRMAQMGEPLWM-TSLDGTAAVLNEDEYVRTFPRGIGP----KPTG 331
            +++ELAVAAMEEL+RM ++ EPLW    + G    LNE+EY R F    G     K  G
Sbjct: 292 GVVVELAVAAMEELLRMTRLNEPLWAGPGVAGPMETLNEEEYARMFGGPRGGGLGPKQYG 351

Query: 332 -FKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ 390
               EASRE+AVVI+   +LVEILMDVNQ++ VFS IVSRA TLEVLSTGVAG Y+GALQ
Sbjct: 352 QLVSEASRESAVVILTPANLVEILMDVNQYAAVFSSIVSRAATLEVLSTGVAGCYDGALQ 411

Query: 391 VMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQ 450
           VM+ EFQVPSPLVPTRESY+VRYCKQ+ +GTWAVVDVSLD L+    ++CRRRPSGCLIQ
Sbjct: 412 VMSVEFQVPSPLVPTRESYFVRYCKQNSDGTWAVVDVSLDTLQ---GIKCRRRPSGCLIQ 468

Query: 451 EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI 510
           E PNGYSKVTWVEHVEVDDR VHN+YK LV++G AFGA+RWV  L RQCERLASVMA+NI
Sbjct: 469 EAPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGALGRQCERLASVMASNI 528

Query: 511 PTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 570
           P  ++GVIT+ +G+KSMLKLAERMV SFC GV+AS AH WT LSG+GA+DVRVMTR+SVD
Sbjct: 529 PNSDIGVITSSEGKKSMLKLAERMVASFCGGVTASVAHQWTRLSGSGAEDVRVMTRQSVD 588

Query: 571 DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTG 630
           DPGRPPGIVL+AATSFWLPVPPKRVFDFLRDE +RS+WDILSNGGVVQEMAHIANGRD G
Sbjct: 589 DPGRPPGIVLNAATSFWLPVPPKRVFDFLRDETSRSQWDILSNGGVVQEMAHIANGRDHG 648

Query: 631 NCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVAL 690
           NCVSLLRVN   S NS+QSNMLILQESCTD + S+VIYAPVDIVAMNVVLNGGDPDYVAL
Sbjct: 649 NCVSLLRVN---STNSNQSNMLILQESCTDASGSYVIYAPVDIVAMNVVLNGGDPDYVAL 705

Query: 691 LPSGFAILPDGTSLHGANIGEAASGG-------------SLLTVAFQILVDSVPTAKLSL 737
           LPSGFAILPDG +      G   +GG             SLLTVAFQILVDSVPTAKLSL
Sbjct: 706 LPSGFAILPDGPA------GNIHTGGGPSVSDGGVGSGGSLLTVAFQILVDSVPTAKLSL 759

Query: 738 GSVATVNNLIACTVERIKASLSCESA 763
           GSVATVN+LIACTVERIKA++S ES+
Sbjct: 760 GSVATVNSLIACTVERIKAAVSGESS 785


>gi|226509342|ref|NP_001145713.1| uncharacterized protein LOC100279217 [Zea mays]
 gi|219884129|gb|ACL52439.1| unknown [Zea mays]
          Length = 672

 Score = 1009 bits (2609), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/673 (75%), Positives = 573/673 (85%), Gaps = 20/673 (2%)

Query: 105 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
           MEAFFKECPHPDDKQRKELSRELGL PLQVKFWFQNKRTQMK QHER EN+QLR ENEKL
Sbjct: 1   MEAFFKECPHPDDKQRKELSRELGLVPLQVKFWFQNKRTQMKNQHERQENSQLRAENEKL 60

Query: 165 RADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKP 224
           RA+NMRY+EALS+ASCPNCGGP A+GEMSFDEHHLR+ENARLREEIDRISAIAAKYVGKP
Sbjct: 61  RAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRVENARLREEIDRISAIAAKYVGKP 120

Query: 225 VVNYPLLSPPVP-SRPLELAVGNFGA----QPGIGGGEMYGAADLLRSISAPTEADKPMI 279
           +V++P+LS P+  +RP  L + + G         G  +++G    + +  A  + DKPMI
Sbjct: 121 MVSFPVLSSPLAGARPSPLDIDSGGVLGGAATYGGAADIFGGGGGVAACGAARDCDKPMI 180

Query: 280 IELAVAAMEELIRMAQMGEPLWMTSL---DGTAAVLNEDEYVRTF--PRGIG-PKPTGFK 333
           +ELAV AMEEL+RMAQ+ EPLW       DG+A  LNE+EY R F    G+G  K  GFK
Sbjct: 181 VELAVTAMEELVRMAQLDEPLWNAPAGGHDGSAETLNEEEYARMFVPAGGLGLKKQYGFK 240

Query: 334 CEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMT 393
            EASR+++VVIM H SLVEILMDVNQ++TVFS IVSRA TLEVLSTGVAGNYNGALQVM+
Sbjct: 241 SEASRDSSVVIMTHASLVEILMDVNQYATVFSSIVSRAATLEVLSTGVAGNYNGALQVMS 300

Query: 394 AEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMP 453
            EFQVPSPLVPTR+SY+VRYCKQ+ +GTWAVVDVSLD    S  ++CRRRPSGCLIQEMP
Sbjct: 301 VEFQVPSPLVPTRDSYFVRYCKQNADGTWAVVDVSLDT---SSVLKCRRRPSGCLIQEMP 357

Query: 454 NGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTG 513
           NGYSKVTWVEHVEVDDR V+ +YK LV +G AFGA+RWV TLDRQCERLASVMA+NIPT 
Sbjct: 358 NGYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVGTLDRQCERLASVMASNIPTS 417

Query: 514 EVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPG 573
           ++GVIT+ +GRKSMLKLAERMV SFC GV+AS AH WTTLSG+GADDVRVMTRKSVDDPG
Sbjct: 418 DIGVITSTEGRKSMLKLAERMVTSFCGGVTASAAHQWTTLSGSGADDVRVMTRKSVDDPG 477

Query: 574 RPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCV 633
           RPPGIVL+AATSFWLP+ PKRVFDFLRDE++RSEWDILSNGGVVQEMAHIANGRD GNCV
Sbjct: 478 RPPGIVLNAATSFWLPITPKRVFDFLRDESSRSEWDILSNGGVVQEMAHIANGRDHGNCV 537

Query: 634 SLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPS 693
           SLLRVN  QS NS+QSNMLILQESCTD + S+VIYAPVD+VAMNVVLNGGDPDYVALLPS
Sbjct: 538 SLLRVN--QSTNSTQSNMLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVALLPS 595

Query: 694 GFAILPDG----TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIAC 749
           GFAILPDG    +++ G   G   SGGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIA 
Sbjct: 596 GFAILPDGPSGSSNMQGGGGGGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIAR 655

Query: 750 TVERIKASLSCES 762
           TVERIKA++S ES
Sbjct: 656 TVERIKAAVSGES 668


>gi|449434374|ref|XP_004134971.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
          Length = 721

 Score = 1005 bits (2598), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/719 (68%), Positives = 583/719 (81%), Gaps = 16/719 (2%)

Query: 47  LDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEME 106
            D T +    E+  +R+++FD+ KSG+E  E A G DQ+Q+ +KKKRY+RHTQHQIQEME
Sbjct: 7   FDTTHHHMLEELENMRDDDFDN-KSGAEILESACGTDQQQQRSKKKRYNRHTQHQIQEME 65

Query: 107 AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRA 166
           AFFKECPHPDDKQR ELSRELGLEPLQVKFWFQNKRTQMK QHERHEN  L+ ENEKLRA
Sbjct: 66  AFFKECPHPDDKQRMELSRELGLEPLQVKFWFQNKRTQMKAQHERHENAILKAENEKLRA 125

Query: 167 DNMRYREALSNASCPNCGGP-TAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPV 225
           +N+RYREA ++++CPNCG   TA+GEMSFD+ HLR+EN+RLR+EI+R+S   +K   KP 
Sbjct: 126 ENIRYREAFAHSTCPNCGSSSTALGEMSFDDQHLRIENSRLRDEIERMSGYGSKCT-KP- 183

Query: 226 VNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVA 285
             Y  L    P+R L+L + NFG Q     GEMYGAAD  RSIS P+E +KP+I+ELAV+
Sbjct: 184 --YYQLPTNAPTRSLDLGITNFGPQSSGFVGEMYGAADFFRSISRPSEGEKPVIVELAVS 241

Query: 286 AMEELIRMAQMGEPLWMTSLDGTAA---VLNEDEYVRTFPRGIGPKPTGFKCEASRETAV 342
            MEEL RMAQ GEPLW+   DG ++   VLNE EY+R+F  GI  KP GF+ EASR +AV
Sbjct: 242 GMEELRRMAQGGEPLWVAG-DGKSSGEVVLNEAEYLRSFGGGIVGKPMGFRTEASRVSAV 300

Query: 343 VIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPL 402
           V MNH+ LV+I MD  QWSTVF GIVSRA T+E+LS G+ GN+NGAL VM+AEFQVPSPL
Sbjct: 301 VFMNHMKLVDIFMDATQWSTVFCGIVSRASTVEILSPGLPGNFNGALHVMSAEFQVPSPL 360

Query: 403 VPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWV 462
           VPTRE+Y+VRYCKQ  +G+WAV DVSLD LRPSP    RR+PSGCLIQE+PNGYSK+TWV
Sbjct: 361 VPTRENYFVRYCKQQTDGSWAVADVSLDTLRPSPIPNTRRKPSGCLIQELPNGYSKITWV 420

Query: 463 EHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQD 522
           EHVEVD+ GV  +Y+ LV++G AFGAKRWVATLDRQ ER A+ +AT IPTG++ VI++ +
Sbjct: 421 EHVEVDETGVPTMYRTLVNSGLAFGAKRWVATLDRQSERFATSIATTIPTGDLRVISSIE 480

Query: 523 GRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSA 582
           GRKSMLKLAERMV SFCAGV AS+ H WT L     D+VRV+TRKS D+PGRPPG+VLSA
Sbjct: 481 GRKSMLKLAERMVTSFCAGVGASSVHAWTALPAAAGDEVRVVTRKSTDEPGRPPGVVLSA 540

Query: 583 ATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQ 642
           ATSFW+PV PK VFDFLR E +RSEWDILSNGG+VQEMAHIANGR +GNCVSLLRVN   
Sbjct: 541 ATSFWIPVSPKVVFDFLRKEKSRSEWDILSNGGLVQEMAHIANGRHSGNCVSLLRVN--- 597

Query: 643 SANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPD-- 700
           SANSSQSNMLILQESCTD T S+VIYAPVD VAMNVVL+G DPDYVALLPSGFAILPD  
Sbjct: 598 SANSSQSNMLILQESCTDSTGSYVIYAPVDTVAMNVVLSGCDPDYVALLPSGFAILPDGP 657

Query: 701 -GTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
            G   +G  I E  SGGSL+TVAFQILVDSVPTA+LS+GSVATVN+LI CTVERI+A++
Sbjct: 658 GGGGNNGGGILELGSGGSLITVAFQILVDSVPTARLSIGSVATVNSLIKCTVERIRAAV 716


>gi|242080491|ref|XP_002445014.1| hypothetical protein SORBIDRAFT_07g002780 [Sorghum bicolor]
 gi|18481701|gb|AAL73523.1|AF466200_2 OCL5 protein [Sorghum bicolor]
 gi|241941364|gb|EES14509.1| hypothetical protein SORBIDRAFT_07g002780 [Sorghum bicolor]
          Length = 803

 Score =  996 bits (2574), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/797 (66%), Positives = 605/797 (75%), Gaps = 66/797 (8%)

Query: 22  VGGLGSSSGLTLSQPTNMMEGQLHPLDM-----------------TQNTSESEIARLREE 64
           +GGL S +  +L Q  NMM+G  H L M                    TSES+    R +
Sbjct: 8   IGGLASYAA-SLGQ--NMMDGH-HQLAMMQQQQHQNHGQQQQHPPQAATSESDARGPRHD 63

Query: 65  EFD-STKSGSENHEGASG---------DDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPH 114
           E    +KSGS+N EG +G         +D   +P +KKRYHRHTQHQIQE+EAFFKE PH
Sbjct: 64  ELMMESKSGSDNMEGGAGSGSGGEELQEDLSLQPARKKRYHRHTQHQIQELEAFFKEYPH 123

Query: 115 PDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREA 174
           PDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ ERHEN QLR ENEKLRA+N RY++A
Sbjct: 124 PDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQQERHENMQLRAENEKLRAENARYKDA 183

Query: 175 LSNASCPNCGGPT--AIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNY-PLL 231
           L+NASCPNCGGP    IGEMSFDEHHLR+ENARLR+E+DRIS IAAKYVGKP  +  P L
Sbjct: 184 LANASCPNCGGPATAVIGEMSFDEHHLRIENARLRDEVDRISTIAAKYVGKPAGSLLPNL 243

Query: 232 S--PPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEE 289
           S        P              GG +M+G   L     A    DK +++ELAVAAMEE
Sbjct: 244 SNISSASMAPYPPPPPLSSHHLLPGGTDMFGGLHLH---GAAAGFDKGLVVELAVAAMEE 300

Query: 290 LIRMAQMGEPLWMTSL--DG-TAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMN 346
           L+RMAQ+GEPLW+ +L  DG T   LNE+EY R FP G+GPK    + EASRET VVIMN
Sbjct: 301 LVRMAQLGEPLWIPALVVDGATIETLNEEEYARGFPSGVGPKLPELRSEASRETVVVIMN 360

Query: 347 HISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTR 406
           H++L+E+LMDVNQWST+FS IVSRA TLEVLSTGVAGNYNGALQ+MTAEFQ+PSPLVPTR
Sbjct: 361 HVNLIEMLMDVNQWSTLFSSIVSRAATLEVLSTGVAGNYNGALQLMTAEFQMPSPLVPTR 420

Query: 407 ESYYVRYCKQHGEGTWAVVDVSLDNLRPS--PAVRCRRRPSGCLIQEMPNGYSKVTWVEH 464
           ES ++RYCKQH +G+WAVVDVS++ LR S     R RRRPSGCLIQEMPNGYS+VTWVEH
Sbjct: 421 ESQFLRYCKQHTDGSWAVVDVSVEGLRASGQAGARGRRRPSGCLIQEMPNGYSRVTWVEH 480

Query: 465 VEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTG------EVGVI 518
           VE DD  VH+LY+ LV +G AFGA+RW A L+RQCERLAS MA+ +P G       VGV+
Sbjct: 481 VEADDMMVHDLYRPLVCSGLAFGARRWAAALERQCERLASAMASGVPAGPSSGGDAVGVV 540

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T+ +GR+SML+LAERMV SFC GV+AST H WT LSG+GA+DVRVMTRKSVDDPGRPPGI
Sbjct: 541 TSVEGRRSMLRLAERMVTSFCGGVTASTTHQWTKLSGSGAEDVRVMTRKSVDDPGRPPGI 600

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRV 638
           +L+AATSFWLPVPP RVF FLRD+ TRSEWDILSNGG VQEMAHIANGRD GN VSLLRV
Sbjct: 601 ILNAATSFWLPVPPARVFGFLRDDATRSEWDILSNGGDVQEMAHIANGRDHGNAVSLLRV 660

Query: 639 NCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL 698
           N   +ANS+QSNMLILQE CTD T S+VIYAPVD+VAMNVVLNGGDPDYVALLPSGFAIL
Sbjct: 661 N---NANSNQSNMLILQECCTDATGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 717

Query: 699 PDGTSLHGANIGEAA-------------SGGSLLTVAFQILVDSVPTAKLSLGSVATVNN 745
           PDG+   GA  G A               GGSLLTVAFQILVDSVPTAKLSLGSVATVN+
Sbjct: 718 PDGSGAGGAPPGFAVLPDGPGAGGGGGGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNS 777

Query: 746 LIACTVERIKASLSCES 762
           LIACTVERIKA+++ ++
Sbjct: 778 LIACTVERIKAAVAADN 794


>gi|449454863|ref|XP_004145173.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
 gi|449474595|ref|XP_004154226.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
 gi|449516709|ref|XP_004165389.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
          Length = 696

 Score =  961 bits (2484), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/684 (68%), Positives = 556/684 (81%), Gaps = 19/684 (2%)

Query: 89  NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           NK+KRYHRHTQ QIQEMEAFFKECPHPDDKQRK+LSRELGLEPLQVKFWFQNKRTQ+K Q
Sbjct: 17  NKRKRYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSRELGLEPLQVKFWFQNKRTQIKAQ 76

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            ERHEN  L+ +NEKLRA+NMRY+EALSN SCPNCGGP A+GEMSFD  HLR++NA LR+
Sbjct: 77  QERHENAILKAQNEKLRAENMRYKEALSNTSCPNCGGPAALGEMSFDAQHLRIDNAHLRD 136

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGG----GEMYGAAD- 263
           EI+R++    KY GK    +   S  + S   ++   +   Q   G     G+MYG    
Sbjct: 137 EIERLNG-NNKYGGK---GWGSHSSHIVSCGGQVGRSSLKPQQLQGDDHLLGDMYGETTT 192

Query: 264 --LLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF 321
             +L+S S  TE DKP+I+ELAV+AMEE+ RMAQ GEPLW+   + +  +LNEDEY+RT+
Sbjct: 193 GMMLKSSSVTTEIDKPVIVELAVSAMEEVCRMAQEGEPLWVVG-ENSMEMLNEDEYLRTY 251

Query: 322 PRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGV 381
              IGP+  G   EASR+T+++  NH+ LV ILMDVNQWST+F GIVSRA+TLEVLS+GV
Sbjct: 252 STRIGPRIVGLTSEASRQTSILAFNHLKLVHILMDVNQWSTIFCGIVSRALTLEVLSSGV 311

Query: 382 AGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCR 441
            G+YNGALQVMTAEFQVPSPLVPTRE+Y+VRYCKQ GEG+WAVVDVSLD LRP+P  R R
Sbjct: 312 GGDYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQQGEGSWAVVDVSLDYLRPTPTSRTR 371

Query: 442 RRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCER 501
           RRPSGCLIQE+PNGYSKVTWVEHVEVDDR VH+LYK +V+ G AFGAKRW+ATL RQC+R
Sbjct: 372 RRPSGCLIQELPNGYSKVTWVEHVEVDDRAVHSLYKGVVTCGLAFGAKRWMATLGRQCQR 431

Query: 502 LASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV 561
           L +  +TNIP  ++ V+T Q+GRKS++KLAERMV SFC+GV A+TAH WTTLS   +DDV
Sbjct: 432 LTNSSSTNIPALDICVVTGQEGRKSVMKLAERMVRSFCSGVGAATAHNWTTLSTIDSDDV 491

Query: 562 RVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMA 621
           RVM RKS+DDPGRPPGIVL+AATSFW+P+PP RVF+FLRD+NTR++WDILSNGG+VQEMA
Sbjct: 492 RVMARKSLDDPGRPPGIVLNAATSFWIPIPPNRVFNFLRDQNTRNQWDILSNGGLVQEMA 551

Query: 622 HIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDP-TASFVIYAPVDIVAMNVVL 680
            I N R++GNCVSLLRVN   SANSSQSNMLILQESC+D  + S++IYAPVD  AMN+VL
Sbjct: 552 RIGNDRNSGNCVSLLRVN---SANSSQSNMLILQESCSDDISGSYIIYAPVDTAAMNMVL 608

Query: 681 NGGDPDYVALLPSGFAIL---PDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSL 737
           +GGDPDYVALLPSGFAIL   P         I E  +GGSLLTVAFQILVDSVPTAKLSL
Sbjct: 609 SGGDPDYVALLPSGFAILPDGPPIGPEGPPGILEFGAGGSLLTVAFQILVDSVPTAKLSL 668

Query: 738 GSVATVNNLIACTVERIKASLSCE 761
           GSVATVN+LI CTVERI+A+L C+
Sbjct: 669 GSVATVNSLIKCTVERIRAALMCD 692


>gi|109729926|tpg|DAA05777.1| TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens]
          Length = 799

 Score =  941 bits (2433), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/783 (61%), Positives = 593/783 (75%), Gaps = 32/783 (4%)

Query: 1   MPTGVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIAR 60
           MPTG M P R +P             S S L+L  PT + +GQ    +++Q     +  +
Sbjct: 29  MPTGAMAPPRQIPPLAMPRPPPKHYSSPS-LSLGPPTGL-DGQR---EVSQTADNEQQQK 83

Query: 61  LREEEFDSTKSGSENHEGASGD-DQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQ 119
            +EEE++S +SGS+N EG SGD D +    +KKRYHRHT  QIQEME  FKECPHPDDKQ
Sbjct: 84  NKEEEYES-RSGSDNMEGGSGDEDPDNNHPRKKRYHRHTPRQIQEMEMLFKECPHPDDKQ 142

Query: 120 RKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNAS 179
           R++LS++LGLEP QVKFWFQN+RTQMK Q ER EN+ LR ENEK+R++N+  REAL N  
Sbjct: 143 RQQLSKDLGLEPRQVKFWFQNRRTQMKAQTERAENSMLRAENEKVRSENLIMREALKNPQ 202

Query: 180 CPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRP 239
           CP+CGGP  +GEM+FDE  LR+EN RL+EE+DR+SA+AAKY+G+P+   P+    +PS  
Sbjct: 203 CPHCGGPATVGEMTFDEQQLRIENVRLKEELDRVSALAAKYLGRPIT--PMAPLALPSSS 260

Query: 240 LELAVG---NFGA-QPGIGGGEMYGA---ADLLRSISAPTEADKPMIIELAVAAMEELIR 292
           L+L VG   +FG   P  G  ++      AD+       TEA+KPM++ELA+ AMEEL+R
Sbjct: 261 LDLQVGGGSSFGGMHPTPGNLDLVAGPSVADVATRPGGLTEAEKPMVVELAMMAMEELVR 320

Query: 293 MAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVE 352
           MAQ  EPLW+ S+D   A LN DEY+R FPRGIG +P+G K EA+RETA+V+MN ++LVE
Sbjct: 321 MAQAEEPLWL-SMDSGKAQLNYDEYMRQFPRGIGMRPSGLKPEATRETALVMMNGVNLVE 379

Query: 353 ILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVR 412
            LMD  QW  +F  +VSRA+T++VLSTGV GN NGALQ+M AE QV SPLVPTRE Y++R
Sbjct: 380 TLMDATQWMDMFPCMVSRALTVDVLSTGVTGNRNGALQLMYAELQVLSPLVPTREIYFLR 439

Query: 413 YCKQHGEGTWAVVDVSLDNLRPSPA---VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 469
           YCKQH EG WAVVDVS+D+LR +P    +RCRRRPSG LIQ+ PNGY+KVT VEH+E DD
Sbjct: 440 YCKQHAEGVWAVVDVSVDSLRDNPPPSLMRCRRRPSGVLIQDTPNGYAKVTCVEHMEYDD 499

Query: 470 RGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK 529
           R VH +Y++LV+TG AFGA+RW+ATL RQCERLAS++A+NI + ++G + +  GR+SMLK
Sbjct: 500 RAVHRMYRELVNTGMAFGAQRWLATLQRQCERLASLLASNIASRDLGGVPSASGRRSMLK 559

Query: 530 LAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP 589
           LA+RM  +FCAGVSAST HTWTTLSG+G DDVRVMTRKSVD+PG P GIVLSAATS WLP
Sbjct: 560 LAQRMTNNFCAGVSASTVHTWTTLSGSGDDDVRVMTRKSVDNPGEPHGIVLSAATSMWLP 619

Query: 590 VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQS 649
           V P RVF FLRDE  RSEWDILSNGG+V EMAHIA G+D GN VSLLRVN +   NS+QS
Sbjct: 620 VSPARVFQFLRDERLRSEWDILSNGGIVTEMAHIAKGQDPGNSVSLLRVNAM---NSNQS 676

Query: 650 NMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGT-----SL 704
           NMLILQESCTD + S VIYAPVDI AMN+VL GGDP YVALLPSGFAILPDG      SL
Sbjct: 677 NMLILQESCTDVSGSLVIYAPVDIPAMNLVLQGGDPAYVALLPSGFAILPDGPGGERGSL 736

Query: 705 ---HGANIGEAASG-GSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
               G+ + E++ G GSLLTVAFQILV S+P+A+LSL SVATVNNLI+CTV+RIK++L  
Sbjct: 737 GVDQGSQLTESSRGTGSLLTVAFQILVSSIPSARLSLESVATVNNLISCTVQRIKSALLV 796

Query: 761 ESA 763
           E A
Sbjct: 797 EDA 799


>gi|345195182|tpg|DAA34956.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413917511|gb|AFW57443.1| putative homeobox/lipid-binding domain family protein isoform 1
           [Zea mays]
 gi|413917512|gb|AFW57444.1| putative homeobox/lipid-binding domain family protein isoform 2
           [Zea mays]
          Length = 769

 Score =  931 bits (2406), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 506/774 (65%), Positives = 577/774 (74%), Gaps = 84/774 (10%)

Query: 38  NMMEGQLHPLDMTQN-----------TSESEIARLREEEF-DSTKSGSENHEGASG---- 81
           NMM+G  H L M Q            TSES+    R +E    +KSGS+N EG +     
Sbjct: 4   NMMDGH-HQLAMMQQQHQNHGQQQAATSESDARGPRHDELLMESKSGSDNMEGGARSGGS 62

Query: 82  ---DDQEQ-----RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
              + QE+     +P +KKRYHRHTQHQIQE+EAFFKE PHPDDKQRKELSRELGLEPLQ
Sbjct: 63  GGEELQEEDLGLRQPARKKRYHRHTQHQIQELEAFFKEYPHPDDKQRKELSRELGLEPLQ 122

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTA---IG 190
           VKFWFQNKRTQMKTQ ERHEN QLR ENEKLRA+N RY++AL+NASCP+CGGP A   IG
Sbjct: 123 VKFWFQNKRTQMKTQQERHENMQLRAENEKLRAENARYKDALANASCPSCGGPAATAVIG 182

Query: 191 EMSFDEHHLRLENARLREEIDRISAIAAKYVGKPV--------------VNYPLLSPPVP 236
           EMSFDEHHLR+ENARLR+E+DRIS IAAKYVGKP               V+ P LS    
Sbjct: 183 EMSFDEHHLRVENARLRDEVDRISTIAAKYVGKPAGSLLLLPPNNLSNNVSGPALSSHHH 242

Query: 237 SRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQM 296
             P              GG +++G   L R      + DK +++ELAVAAMEEL+RMA +
Sbjct: 243 LLP--------------GGTDVFGG--LHRHAGGGFDFDKGLVVELAVAAMEELVRMALL 286

Query: 297 GEPLWMTSL--DG-TAAVLNEDEYVR-TFPRGIGPKPTGFKCEASRETAVVIMNHISLVE 352
           GEPLW+ +L  DG T   LNE+EY R  FPRG+GPK    + EASRE  VVIMNH+SL+E
Sbjct: 287 GEPLWIPALAVDGATTETLNEEEYARGFFPRGVGPKLPELRSEASREAVVVIMNHVSLIE 346

Query: 353 ILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVR 412
           +LMDVNQWST+FS IVSRA TLEVLSTGVAGNYNGALQ+MTAEFQ+PSPLVPTRE  ++R
Sbjct: 347 MLMDVNQWSTLFSSIVSRAATLEVLSTGVAGNYNGALQLMTAEFQMPSPLVPTRECQFLR 406

Query: 413 YCKQHGEGTWAVVDVS-----LDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEV 467
           YCKQH +G+WAVVDVS     L         R RRRPSGCLIQEMPNGYS+VTWVEH E 
Sbjct: 407 YCKQHTDGSWAVVDVSVEGQLLRTGSRQGRGRGRRRPSGCLIQEMPNGYSRVTWVEHAEA 466

Query: 468 DDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI------TNQ 521
           DD  VH+LY+ LV +G AFGA+RW +TL+RQCERLAS MA+ +              T+ 
Sbjct: 467 DDMMVHDLYRPLVCSGLAFGARRWASTLERQCERLASAMASGVVVPAAAAGPAAGVVTSP 526

Query: 522 DGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLS 581
           +GR+SM++LAERMV SFC GV+AST H WTTLSG+GA+DVRVMTRKSVDDPGRPPGI+L+
Sbjct: 527 EGRRSMMRLAERMVASFCGGVTASTTHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIILN 586

Query: 582 AATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCL 641
           AATSFWLPV P RVF FLRD+ TRSEWD+LSNGG VQEMAHIANGRD GN VSLLRV+  
Sbjct: 587 AATSFWLPVAPARVFGFLRDDATRSEWDMLSNGGDVQEMAHIANGRDHGNAVSLLRVD-- 644

Query: 642 QSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG 701
            +ANS+Q NMLILQE CTD T S+VIYAPVD+VAMNVVLNGGDPDYVALLPSGFAILPDG
Sbjct: 645 -NANSNQGNMLILQECCTDATGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDG 703

Query: 702 TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIK 755
                        GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIACTVERIK
Sbjct: 704 GG--------GGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIK 749


>gi|109729922|tpg|DAA05775.1| TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens]
          Length = 799

 Score =  929 bits (2400), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/783 (61%), Positives = 582/783 (74%), Gaps = 32/783 (4%)

Query: 1   MPTGVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIAR 60
           MP G M P R +P             S S L+L  PT + +GQ         T+++E  +
Sbjct: 29  MPAGAMAPPRQIPPLAMPRPPPKHYSSPS-LSLGPPTGL-DGQRE----VSQTADNEQQQ 82

Query: 61  LREEEFDSTKSGSENHEGASGD-DQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQ 119
             +EE++S +SGS+N EG SGD D +    +KKRYHRHT  QIQEME  FKECPHPDDKQ
Sbjct: 83  KNKEEYES-RSGSDNMEGGSGDEDPDNNHPRKKRYHRHTPRQIQEMEMLFKECPHPDDKQ 141

Query: 120 RKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNAS 179
           R++LSR+LGLEP QVKFWFQN+RTQMK Q ER EN+ LR+ENEKLR++N+  REAL N  
Sbjct: 142 RQQLSRDLGLEPRQVKFWFQNRRTQMKAQTERAENSMLRSENEKLRSENLIMREALKNPQ 201

Query: 180 CPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRP 239
           CP+CGGP  +GEM+FDE  LR+EN RL+EE+DR+SA+AAKY+G+P+   P+    +PS  
Sbjct: 202 CPHCGGPATVGEMTFDEQQLRIENVRLKEELDRVSALAAKYLGRPIT--PMAPLALPSSS 259

Query: 240 LELAVG---NFGA-QPGIGGGEMYGA---ADLLRSISAPTEADKPMIIELAVAAMEELIR 292
           L+L VG   +FG   P  G  ++      AD+       TEA+KPM++ELAV AMEEL+R
Sbjct: 260 LDLQVGGGSSFGGMHPAPGNLDVVAGPSVADVATRPGGLTEAEKPMVVELAVTAMEELVR 319

Query: 293 MAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVE 352
           MAQ  EPLW+   +     LN +EY+R FPRGIG  P G K EA+RETA+V+MN ++LVE
Sbjct: 320 MAQTEEPLWVNMGEVGKEQLNYEEYMRQFPRGIGMCPPGLKTEATRETALVMMNGVNLVE 379

Query: 353 ILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVR 412
            LMD  QW  +F  IVSRA+T++VL+TGV GN NGALQ+M AE QV SPLVPTRE Y++R
Sbjct: 380 TLMDATQWMDMFPCIVSRALTVDVLATGVTGNRNGALQLMYAELQVLSPLVPTREIYFLR 439

Query: 413 YCKQHGEGTWAVVDVSLDNLRPSPA---VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 469
           YCKQH EG WAVVDVS+D+LR +P    +RCRRRPSG LIQ+ PNGY+KVT VEH+E DD
Sbjct: 440 YCKQHAEGVWAVVDVSVDSLRDNPPPSLMRCRRRPSGVLIQDTPNGYAKVTCVEHMEYDD 499

Query: 470 RGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK 529
           R VH +Y+ LV+TG AFGA+RW+ATL RQCERLAS++A+NI + ++G + +  GR+SMLK
Sbjct: 500 RAVHRMYRDLVNTGMAFGAQRWLATLQRQCERLASLLASNIASRDLGGVPSASGRRSMLK 559

Query: 530 LAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP 589
           LA+RM  +FCAGVSAST HTWTTLSG+G DDVRVMTRKSVD+PG P GIVLSAATS WLP
Sbjct: 560 LAQRMTNNFCAGVSASTVHTWTTLSGSGDDDVRVMTRKSVDNPGEPHGIVLSAATSMWLP 619

Query: 590 VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQS 649
           V P RVF FLRDE  RSEWDILSNGG+V EMAHIA G+D GN VSLLRVN +   NSSQS
Sbjct: 620 VSPARVFQFLRDERLRSEWDILSNGGMVTEMAHIAKGQDPGNSVSLLRVNAM---NSSQS 676

Query: 650 NMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGT------- 702
           NMLILQESCTD + S VIYAPVDI AMN+VL GGDP YVALLPSGFAILPDG        
Sbjct: 677 NMLILQESCTDVSGSLVIYAPVDIPAMNLVLQGGDPAYVALLPSGFAILPDGPGGDRGAL 736

Query: 703 -SLHGANIGEAASG-GSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
            +  G  + E   G GSLLTVAFQILV S+P+A+LSL SVATVNNLI+CTV+RI+++L  
Sbjct: 737 GNEQGGQLTEIGRGTGSLLTVAFQILVSSIPSARLSLESVATVNNLISCTVQRIRSALLV 796

Query: 761 ESA 763
           E A
Sbjct: 797 EDA 799


>gi|302794502|ref|XP_002979015.1| hypothetical protein SELMODRAFT_450554 [Selaginella moellendorffii]
 gi|300153333|gb|EFJ19972.1| hypothetical protein SELMODRAFT_450554 [Selaginella moellendorffii]
          Length = 786

 Score =  925 bits (2391), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/790 (59%), Positives = 581/790 (73%), Gaps = 33/790 (4%)

Query: 1   MPTGVMI------PARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNT- 53
           MP G M       P+ +MP      G      SS GLTL  P+ +++G+        +  
Sbjct: 1   MPAGAMAAPRLIPPSPSMPRRGNGGGGANIYSSSPGLTLGLPS-IVDGRQQAGAGAGDGD 59

Query: 54  --SESEI-------ARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQE 104
             ++S I       ++ ++EE++S +SGS+N +G+ G+DQ+  P +KKRYHRHT HQIQE
Sbjct: 60  AQNQSGIGAPMKLSSKNKDEEYES-RSGSDNMDGSGGEDQDNEPPRKKRYHRHTPHQIQE 118

Query: 105 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
           MEA FKECPHPDDKQR+ELSRELGLEP QVKFWFQN+RTQ+K Q ER EN+ LR E EKL
Sbjct: 119 MEALFKECPHPDDKQRQELSRELGLEPRQVKFWFQNRRTQLKAQQERAENSMLRLEIEKL 178

Query: 165 RADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKP 224
           RA+N+  REA+ NASCP+CGGP  +GEMS+DE  LR+ENARL++E+DR+S +AAKY+G+P
Sbjct: 179 RAENVTMREAIKNASCPSCGGPATLGEMSYDEQQLRIENARLKDELDRVSTLAAKYLGRP 238

Query: 225 VVNYPLLSPPVPSRPLELAVG---NFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIE 281
           + +        PS  L+LAVG   NF        G +  A          +EADKPMI++
Sbjct: 239 IPHLSGGGSQAPSSSLDLAVGGAANFHQGGAAAAGSLVSAGSESMRPGGLSEADKPMIVD 298

Query: 282 LAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETA 341
           LAV AMEEL R+ Q  EP W+ S DG   VLN DEY+R +   +GP+P G + EA+RE+ 
Sbjct: 299 LAVTAMEELYRLCQPEEPSWIPSPDGPKEVLNYDEYIRQYQSALGPRPYGMRTEATRESD 358

Query: 342 VVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSP 401
           +V+MN ++LVE+LMD  +W+ +F  IVSRA+T++VL+TGV GN NGA+Q+M AE QV SP
Sbjct: 359 LVMMNGVNLVELLMDSAKWAEIFPSIVSRAVTIDVLATGVTGNRNGAVQLMYAEMQVLSP 418

Query: 402 LVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAV---RCRRRPSGCLIQEMPNGYSK 458
           LVPTRE Y+VRYCKQH +G W +VDVS+D L    A    RCRRRPSG LIQ+MPNGYSK
Sbjct: 419 LVPTREFYFVRYCKQHADGVWGIVDVSVDALAREAAPSSNRCRRRPSGYLIQDMPNGYSK 478

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VT +EHVE DDR V+ +YK  V++G AFGA+RW+ TL RQCERLAS++AT+I   ++GVI
Sbjct: 479 VTVLEHVEYDDRSVNRIYKPYVNSGLAFGAQRWLLTLQRQCERLASLLATSISARDLGVI 538

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
            N  GR+SMLKLA+RM  +FCAGVSAST HTWTTLSG+G DDVRVMTRKSVD+PG P GI
Sbjct: 539 PNASGRRSMLKLAQRMTNNFCAGVSASTVHTWTTLSGSGEDDVRVMTRKSVDNPGEPHGI 598

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRV 638
           VLSAATS WLPVPPKRVF+FLRDE  R+EWDILSNGG+VQEMAHIA G+D GN VSLLRV
Sbjct: 599 VLSAATSLWLPVPPKRVFEFLRDERLRNEWDILSNGGMVQEMAHIAKGQDPGNSVSLLRV 658

Query: 639 NCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL 698
           N L   NS+ SNMLILQESCTD + S V+YAPVDI AMN+V+ GGDP YVALLPSGFAIL
Sbjct: 659 NTL---NSTHSNMLILQESCTDDSGSLVVYAPVDIPAMNLVMQGGDPAYVALLPSGFAIL 715

Query: 699 PDGTSLHGA------NIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVE 752
           PDG    G+       +      GSLLTVAFQILV +VP+AKLSL SV TVNNLI+CTV+
Sbjct: 716 PDGQDHCGSLQHDSLEVDRPRVPGSLLTVAFQILVSNVPSAKLSLESVTTVNNLISCTVQ 775

Query: 753 RIKASLSCES 762
           +IKA+L C++
Sbjct: 776 KIKAALQCDN 785


>gi|109729920|tpg|DAA05774.1| TPA_inf: class IV HD-Zip protein HDZ44 [Selaginella moellendorffii]
          Length = 786

 Score =  925 bits (2390), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/789 (59%), Positives = 577/789 (73%), Gaps = 31/789 (3%)

Query: 1   MPTGVMI------PARNMPSTIGRNGNVGGLGSSSGLTLSQPT--NMMEGQLHPLDMTQN 52
           MP G M       P+ +MP      G      SS GLTL  P+  +  +           
Sbjct: 1   MPAGAMAAPRLIPPSPSMPRRGNGGGGANIYSSSPGLTLGLPSIVDGRQQGGAGAGDGDA 60

Query: 53  TSESEI-------ARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEM 105
            ++S I       ++ ++EE++S +SGS+N +G+ G+DQ+  P +KKRYHRHT HQIQEM
Sbjct: 61  QNQSGIGAPMKLSSKNKDEEYES-RSGSDNMDGSGGEDQDNEPPRKKRYHRHTPHQIQEM 119

Query: 106 EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLR 165
           EA FKECPHPDDKQR+ELSRELGLEP QVKFWFQN+RTQ+K Q ER EN+ LR E EKLR
Sbjct: 120 EALFKECPHPDDKQRQELSRELGLEPRQVKFWFQNRRTQLKAQQERAENSMLRLEIEKLR 179

Query: 166 ADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPV 225
           A+N+  REA+ NASCP+CGGP  +GEMS+DE  LR+ENARL++E+DR+S +AAKY+G+P+
Sbjct: 180 AENVTMREAIKNASCPSCGGPATLGEMSYDEQQLRIENARLKDELDRVSTLAAKYLGRPI 239

Query: 226 VNYPLLSPPVPSRPLELAVG---NFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIEL 282
            +        PS  L+LAVG   NF        G +  A          +EADKPMI++L
Sbjct: 240 PHLSGGGSQAPSSSLDLAVGGAANFHQGGAAAAGSLVSAGSESMRPGGLSEADKPMIVDL 299

Query: 283 AVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAV 342
           AV AMEEL R+ Q  EP W+ S DG   VLN DEY+R +   +GP+P G + EA+RE+ +
Sbjct: 300 AVTAMEELYRLCQPEEPSWIPSPDGPKEVLNYDEYIRQYQSALGPRPYGMRTEATRESDL 359

Query: 343 VIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPL 402
           V+MN ++LVE+LMD  +W+ +F  IVSRA+T++VL+TGV GN NGA+Q+M AE QV SPL
Sbjct: 360 VMMNGVNLVELLMDSAKWAEIFPSIVSRAVTIDVLATGVTGNRNGAVQLMYAEMQVLSPL 419

Query: 403 VPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAV---RCRRRPSGCLIQEMPNGYSKV 459
           VPTRE Y+VRYCKQH +G W +VDVS+D L    A    RCRRRPSG LIQ+MPNGYSKV
Sbjct: 420 VPTREFYFVRYCKQHADGVWGIVDVSVDALAREAAPSSNRCRRRPSGYLIQDMPNGYSKV 479

Query: 460 TWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVIT 519
           T +EHVE DDR V+ +YK  V++G AFGA+RW+ TL RQCERLAS++AT+I   ++GVI 
Sbjct: 480 TVLEHVEYDDRSVNRIYKPYVNSGLAFGAQRWLLTLQRQCERLASLLATSISARDLGVIP 539

Query: 520 NQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIV 579
           N  GR+SMLKLA+RM  +FCAGVSAST HTWTTLSG+G DDVRVMTRKSVD+PG P GIV
Sbjct: 540 NASGRRSMLKLAQRMTNNFCAGVSASTVHTWTTLSGSGEDDVRVMTRKSVDNPGEPHGIV 599

Query: 580 LSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVN 639
           LSAATS WLPVPPKRVF+FLRDE  R+EWDILSNGG+VQEMAHIA G+D GN VSLLRVN
Sbjct: 600 LSAATSLWLPVPPKRVFEFLRDERLRNEWDILSNGGMVQEMAHIAKGQDPGNSVSLLRVN 659

Query: 640 CLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 699
            L   NS+ SNMLILQESCTD + S V+YAPVDI AMN+V+ GGDP YVALLPSGFAILP
Sbjct: 660 TL---NSTHSNMLILQESCTDDSGSLVVYAPVDIPAMNLVMQGGDPAYVALLPSGFAILP 716

Query: 700 DGTSLHGA------NIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVER 753
           DG    G+       +      GSLLTVAFQILV +VP+AKLSL SV TVNNLI+CTV++
Sbjct: 717 DGQDHCGSLQHDSLEVDRPRVPGSLLTVAFQILVSNVPSAKLSLESVTTVNNLISCTVQK 776

Query: 754 IKASLSCES 762
           IKA+L C++
Sbjct: 777 IKAALQCDN 785


>gi|302813433|ref|XP_002988402.1| hypothetical protein SELMODRAFT_450553 [Selaginella moellendorffii]
 gi|300143804|gb|EFJ10492.1| hypothetical protein SELMODRAFT_450553 [Selaginella moellendorffii]
          Length = 817

 Score =  924 bits (2389), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/789 (59%), Positives = 577/789 (73%), Gaps = 31/789 (3%)

Query: 1   MPTGVMI------PARNMPSTIGRNGNVGGLGSSSGLTLSQPT--NMMEGQLHPLDMTQN 52
           MP G M       P+ +MP      G      SS GLTL  P+  +  +           
Sbjct: 32  MPAGAMAAPRLIPPSPSMPRRGNGGGGANIYSSSPGLTLGLPSIVDGRQQGGAGAGDGDA 91

Query: 53  TSESEI-------ARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEM 105
            ++S I       ++ ++EE++S +SGS+N +G+ G+DQ+  P +KKRYHRHT HQIQEM
Sbjct: 92  QNQSGIGAPMKLSSKNKDEEYES-RSGSDNMDGSGGEDQDNEPPRKKRYHRHTPHQIQEM 150

Query: 106 EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLR 165
           EA FKECPHPDDKQR+ELSRELGLEP QVKFWFQN+RTQ+K Q ER EN+ LR E EKLR
Sbjct: 151 EALFKECPHPDDKQRQELSRELGLEPRQVKFWFQNRRTQLKAQQERAENSMLRLEIEKLR 210

Query: 166 ADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPV 225
           A+N+  REA+ NASCP+CGGP  +GEMS+DE  LR+ENARL++E+DR+S +AAKY+G+P+
Sbjct: 211 AENVTMREAIKNASCPSCGGPATLGEMSYDEQQLRIENARLKDELDRVSTLAAKYLGRPI 270

Query: 226 VNYPLLSPPVPSRPLELAVG---NFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIEL 282
            +        PS  L+LAVG   NF        G +  A          +EADKPMI++L
Sbjct: 271 PHLSGGGSQAPSSSLDLAVGGAANFHQGGAAAAGSLVSAGSESMRPGGLSEADKPMIVDL 330

Query: 283 AVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAV 342
           AV AMEEL R+ Q  EP W+ S DG   VLN DEY+R +   +GP+P G + EA+RE+ +
Sbjct: 331 AVTAMEELYRLCQPEEPSWIPSPDGPKEVLNYDEYIRQYQSALGPRPYGMRTEATRESDL 390

Query: 343 VIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPL 402
           V+MN ++LVE+LMD  +W+ +F  IVSRA+T++VL+TGV GN NGA+Q+M AE QV SPL
Sbjct: 391 VMMNGVNLVELLMDSAKWAEIFPSIVSRAVTIDVLATGVTGNRNGAVQLMYAEMQVLSPL 450

Query: 403 VPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAV---RCRRRPSGCLIQEMPNGYSKV 459
           VPTRE Y+VRYCKQH +G W +VDVS+D L    A    RCRRRPSG LIQ+MPNGYSKV
Sbjct: 451 VPTREFYFVRYCKQHADGVWGIVDVSVDALAREAAPSSNRCRRRPSGYLIQDMPNGYSKV 510

Query: 460 TWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVIT 519
           T +EHVE DDR V+ +YK  V++G AFGA+RW+ TL RQCERLAS++AT+I   ++GVI 
Sbjct: 511 TVLEHVEYDDRSVNRIYKPYVNSGLAFGAQRWLLTLQRQCERLASLLATSISARDLGVIP 570

Query: 520 NQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIV 579
           N  GR+SMLKLA+RM  +FCAGVSAST HTWTTLSG+G DDVRVMTRKSVD+PG P GIV
Sbjct: 571 NASGRRSMLKLAQRMTNNFCAGVSASTVHTWTTLSGSGEDDVRVMTRKSVDNPGEPHGIV 630

Query: 580 LSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVN 639
           LSAATS WLPVPPKRVF+FLRDE  R+EWDILSNGG+VQEMAHIA G+D GN VSLLRVN
Sbjct: 631 LSAATSLWLPVPPKRVFEFLRDERLRNEWDILSNGGMVQEMAHIAKGQDPGNSVSLLRVN 690

Query: 640 CLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 699
            L   NS+ SNMLILQESCTD + S V+YAPVDI AMN+V+ GGDP YVALLPSGFAILP
Sbjct: 691 TL---NSTHSNMLILQESCTDDSGSLVVYAPVDIPAMNLVMQGGDPAYVALLPSGFAILP 747

Query: 700 DGTSLHGA------NIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVER 753
           DG    G+       +      GSLLTVAFQILV +VP+AKLSL SV TVNNLI+CTV++
Sbjct: 748 DGQDHCGSLQHDSLEVDRPRVPGSLLTVAFQILVSNVPSAKLSLESVTTVNNLISCTVQK 807

Query: 754 IKASLSCES 762
           IKA+L C++
Sbjct: 808 IKAALQCDN 816


>gi|357139585|ref|XP_003571361.1| PREDICTED: homeobox-leucine zipper protein ROC7-like [Brachypodium
           distachyon]
          Length = 817

 Score =  910 bits (2352), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/707 (67%), Positives = 538/707 (76%), Gaps = 64/707 (9%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           +RP KKKRYHRHTQHQIQE+EAFFKECPHPDDKQRKELSR L LEPLQVKFWFQNKRTQ+
Sbjct: 125 KRPRKKKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSRMLNLEPLQVKFWFQNKRTQI 184

Query: 146 KTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENAR 205
           KTQHER ENT LRTENEKLRA+NMRY+EAL+NASCP+CGGP AIGEMSFDEHHLRLENAR
Sbjct: 185 KTQHERQENTALRTENEKLRAENMRYKEALANASCPSCGGPAAIGEMSFDEHHLRLENAR 244

Query: 206 LREEIDRISAIAAKYVGK-----------PVVNYPLLSPPVPSRPLELAVGNFGAQPGIG 254
           LR+EIDRISAIAAKYVG            P   YP   PPV S  L    G+     G  
Sbjct: 245 LRDEIDRISAIAAKYVGGAGASAIKPSSLPPAAYP---PPVESSHL---TGSMIFSGGGH 298

Query: 255 GGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWM--TSLDGTAAVL 312
           GGE+                DKPM+IELAVAAMEELIRMA++GEPLW+  +SL      L
Sbjct: 299 GGEL----------------DKPMVIELAVAAMEELIRMARLGEPLWVPSSSLSVGGETL 342

Query: 313 NEDEYVRTFP-----RGIGPKPTGF---KCEASRETAVVIMNHISLVEILMDVNQWSTVF 364
            E+EY R FP         P P      + EASRET VVIM+  +LV ILMDV+QWS+VF
Sbjct: 343 VEEEYSRLFPGKHSSSSSSPAPAENHPPRSEASRETGVVIMDQATLVSILMDVHQWSSVF 402

Query: 365 SGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE-SYYVRYCKQH-----G 418
           S IVSRA TLEVLSTGVAGN +GALQ+M+AE QVPSPLVPTRE   ++RYCK H     G
Sbjct: 403 SSIVSRAATLEVLSTGVAGNLDGALQLMSAELQVPSPLVPTRELPLFLRYCKHHPHGAGG 462

Query: 419 EGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEV------DDRGV 472
            GTWAVVDVSLDN   +  +  RRR SGC+IQEMPNGYSKVTW+EH E+       D  V
Sbjct: 463 AGTWAVVDVSLDNSGRNSNI--RRRASGCVIQEMPNGYSKVTWIEHTELPAAASAADSMV 520

Query: 473 HNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAE 532
           H LYK LV++G AFGA+RWV+TL RQCERLAS   +  P+    V+T+ +GR+SML+LAE
Sbjct: 521 HELYKPLVASGTAFGARRWVSTLKRQCERLASAAMSVHPSSADSVVTSAEGRRSMLRLAE 580

Query: 533 RMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPP 592
           RM  SFC GV+AS  H WTTLSG+G  DVRVMTRKSVDDPGRPPGI+L+AATSFWLPV P
Sbjct: 581 RMTASFCGGVAASATHQWTTLSGSGEADVRVMTRKSVDDPGRPPGIILNAATSFWLPVSP 640

Query: 593 KRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNML 652
             VF FLRD++TRSEWDILSNGGVV EMAHIANG++ GN VSLLRVN   +AN++QSNML
Sbjct: 641 AEVFAFLRDDSTRSEWDILSNGGVVHEMAHIANGQNHGNAVSLLRVN---NANANQSNML 697

Query: 653 ILQESCTDPTA--SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGT--SLHGAN 708
           ILQES TD     S+V+YAPVD+VAMNVVLNGGDPDYVALLPSGFAILPDGT     G  
Sbjct: 698 ILQESSTDEEGGWSYVVYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGTPPDSGGNG 757

Query: 709 IGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIK 755
                 GGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIACTV+RIK
Sbjct: 758 GCVGGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVDRIK 804


>gi|109729924|tpg|DAA05776.1| TPA_inf: class IV HD-Zip protein HDZ42 [Physcomitrella patens]
          Length = 794

 Score =  904 bits (2337), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/783 (60%), Positives = 578/783 (73%), Gaps = 36/783 (4%)

Query: 4   GVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIARLRE 63
           G M P R +P  + R      L +S  L+L+ PT +   +         T+ESE  +  +
Sbjct: 25  GGMAPPRPIPPLMSRPPP--KLYTSPALSLAPPTGVDRQR-----EASQTAESEQQQKNK 77

Query: 64  EEFDSTKSGSENHEGASGDDQEQRPNK-KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE 122
           EE   ++SGS+N EG S DDQ+      KKRYHRHT  QIQEME  FKECPHPDDKQR++
Sbjct: 78  EEEYGSRSGSDNMEGGSDDDQDPDRPPRKKRYHRHTPRQIQEMEMLFKECPHPDDKQRQQ 137

Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPN 182
           LS++LGLEP QVKFWFQN+RT MK Q ER EN+ LR ENEKLR++N+  REAL N  CP+
Sbjct: 138 LSKDLGLEPRQVKFWFQNRRTHMKAQTERAENSMLRAENEKLRSENVIMREALKNPQCPH 197

Query: 183 CGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSP-PVPSRPLE 241
           CGGP  +GEMSFDE  LRLEN RL+EE+DR+SA+AAKY+G+P+   P ++P  +PS  L+
Sbjct: 198 CGGPATVGEMSFDEQQLRLENVRLKEELDRVSALAAKYLGRPI---PPMAPLALPSSSLD 254

Query: 242 LAVG----NFGAQPGIGGGEMY-----GAADLLRSISAPTEADKPMIIELAVAAMEELIR 292
           L VG    +FG       G +        AD+       TEA+KPM++ELA+ AMEEL+R
Sbjct: 255 LQVGAGGSSFGGLHPAQAGNLSMVQGPSVADVATRPGGLTEAEKPMVVELAMMAMEELVR 314

Query: 293 MAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVE 352
           MAQ  EPLW+ + +     LN DEY+R  PRGIG KP G K E +RETA+V+MN ++LVE
Sbjct: 315 MAQSEEPLWVRTPESGREQLNYDEYLRQSPRGIGMKPPGLKTEVTRETAMVMMNGVNLVE 374

Query: 353 ILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVR 412
            LMD  QW  ++  +VSRA+T++VLSTGVAGN NGALQ+M AE QV SPLVPTRE Y++R
Sbjct: 375 TLMDATQWIDMYPCMVSRALTVDVLSTGVAGNRNGALQLMYAELQVLSPLVPTREIYFLR 434

Query: 413 YCKQHGEGTWAVVDVSLDNLRPSPA---VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 469
           YCKQH EG WAVVDVS+++LR +P    +RCRRRPSG LIQ+ PNGY+KVT VEH+E DD
Sbjct: 435 YCKQHAEGVWAVVDVSVESLRDNPPPSLMRCRRRPSGILIQDTPNGYAKVTCVEHMEYDD 494

Query: 470 RGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK 529
           R VH +Y++LV++G AFGA+RW+ATL RQCERLAS++A+NI + ++G + + +GR+SMLK
Sbjct: 495 RAVHRMYRELVNSGMAFGAQRWMATLQRQCERLASLLASNIASRDLGGVPSANGRRSMLK 554

Query: 530 LAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP 589
           LA+RM  +FCAGVSAST HTWTTLSG+G DDVRVMTRKSVD+PG P GIVLSAATS WLP
Sbjct: 555 LAQRMTNNFCAGVSASTVHTWTTLSGSGDDDVRVMTRKSVDNPGEPHGIVLSAATSMWLP 614

Query: 590 VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQS 649
           V P RVF FLRDE  RSEWDILSNGG+V EMAHIA G+D GN VSLL+VN +   N++ S
Sbjct: 615 VSPARVFQFLRDERLRSEWDILSNGGMVTEMAHIAKGQDPGNSVSLLKVNAM---NTNNS 671

Query: 650 NMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG-------- 701
           NMLILQESCTD + S VIYAPVDI AMN+VL GGDP YVALLPSGFAILPDG        
Sbjct: 672 NMLILQESCTDVSGSLVIYAPVDIPAMNLVLQGGDPAYVALLPSGFAILPDGPGGGDRVY 731

Query: 702 TSLHGANIGEAASG-GSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
                  + E+  G GSLLTVAFQILV SVP+A+LSL SVATVNNLI+CTV+RIKA+L  
Sbjct: 732 MGEQPGQLTESGRGSGSLLTVAFQILVSSVPSARLSLESVATVNNLISCTVQRIKAALLV 791

Query: 761 ESA 763
           + A
Sbjct: 792 DDA 794


>gi|414585329|tpg|DAA35900.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 683

 Score =  899 bits (2323), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/668 (70%), Positives = 534/668 (79%), Gaps = 55/668 (8%)

Query: 145 MKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
           ++ QHER EN+QLR ENEKLRA+NMRY+EALS+ASCPNCGGP A+GEMSFDEHHLR+ENA
Sbjct: 17  LQNQHERQENSQLRAENEKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRVENA 76

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVP-SRPLELAVGNFGA----QPGIGGGEMY 259
           RLREEIDRISAIAAKYVGKP+V++P+LS P+  +RP  L + + G         G  +++
Sbjct: 77  RLREEIDRISAIAAKYVGKPMVSFPVLSSPLAGARPSPLDIDSGGVLGGAATYGGAADIF 136

Query: 260 GAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSL---DGTAAVLNEDE 316
           G    + +  A  + DKPMI+ELAV AMEEL+RMAQ+ EPLW       DG+A  LNE+E
Sbjct: 137 GGGGGVAACGAARDCDKPMIVELAVTAMEELVRMAQLDEPLWNAPAGGHDGSAETLNEEE 196

Query: 317 YVRTF--PRGIG-PKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMT 373
           Y R F    G+G  K  GFK EASR+++VVIM H SLVEILMDVNQ++TVFS IVSRA T
Sbjct: 197 YARMFVPAGGLGLKKQYGFKSEASRDSSVVIMTHASLVEILMDVNQYATVFSSIVSRAAT 256

Query: 374 LEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR 433
           LEVLSTGVAGNYNGALQVM+ EFQVPSPLVPTR+SY+VRYCKQ+ +GTWAVVDVSLD   
Sbjct: 257 LEVLSTGVAGNYNGALQVMSVEFQVPSPLVPTRDSYFVRYCKQNADGTWAVVDVSLDT-- 314

Query: 434 PSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVA 493
            S  ++CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR V+ +YK LV +G AFGA+RWV 
Sbjct: 315 -SSVLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVG 373

Query: 494 TLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTL 553
           TLDRQCERLASVMA+NIPT ++GVIT+ +GRKSMLKLAERMV SFC GV+AS AH WTTL
Sbjct: 374 TLDRQCERLASVMASNIPTSDIGVITSTEGRKSMLKLAERMVTSFCGGVTASAAHQWTTL 433

Query: 554 SGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSE------ 607
           SG+GADDVRVMTRKSVDDPGRPPGIVL+AATSFWLP+ PKRVFDFLRDE++RSE      
Sbjct: 434 SGSGADDVRVMTRKSVDDPGRPPGIVLNAATSFWLPITPKRVFDFLRDESSRSEARTRAP 493

Query: 608 -----------------------------WDILSNGGVVQEMAHIANGRDTGNCVSLLRV 638
                                        WDILSNGGVVQEMAHIANGRD GNCVSLLRV
Sbjct: 494 THTQFFFNREHVLPSYEPPFLFFFFLFLQWDILSNGGVVQEMAHIANGRDHGNCVSLLRV 553

Query: 639 NCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL 698
           N  QS NS+QSNMLILQESCTD + S+VIYAPVD+VAMNVVLNGGDPDYVALLPSGFAIL
Sbjct: 554 N--QSTNSTQSNMLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 611

Query: 699 PDG----TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERI 754
           PDG    +++ G   G   SGGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIA TVERI
Sbjct: 612 PDGPSGSSNMQGGGGGGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIARTVERI 671

Query: 755 KASLSCES 762
           KA++S ES
Sbjct: 672 KAAVSGES 679


>gi|109729928|tpg|DAA05778.1| TPA_inf: class IV HD-Zip protein HDZ44 [Physcomitrella patens]
          Length = 809

 Score =  891 bits (2302), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/729 (62%), Positives = 551/729 (75%), Gaps = 33/729 (4%)

Query: 62  REEEFDSTKSGSENHEGASGDDQE-QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQR 120
           +EEE+ S +SGS+N EG S DDQ+   P +KKRYHRHT  QIQEME  FKECPHPDDKQR
Sbjct: 87  KEEEYGS-RSGSDNMEGGSDDDQDADHPPRKKRYHRHTPRQIQEMEMIFKECPHPDDKQR 145

Query: 121 KELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASC 180
           ++LS++LGL P QVKFWFQN+RTQMK Q ER EN+ LR ENEK+RA+N+  REAL    C
Sbjct: 146 QQLSKDLGLAPRQVKFWFQNRRTQMKAQTERAENSLLRAENEKVRAENVIMREALRKTQC 205

Query: 181 PNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPL 240
           P+C  P  +GEMS DE  LR+EN RL+EE+DR+SA+AAKY+G+P+     +   V S  L
Sbjct: 206 PHCSVPATVGEMSLDEQQLRVENVRLKEELDRVSALAAKYLGRPIAGMGPVG--VGSSSL 263

Query: 241 ELAVGNF--GAQPGIGGG--EMYGAADLLRSISAP---TEADKPMIIELAVAAMEELIRM 293
           EL VG +  G Q G  GG  +M     +    + P   TEA+KPM++ELAVAAMEEL+RM
Sbjct: 264 ELQVGGWLSGVQAGSAGGNADMVQGPSVAEVATRPGGLTEAEKPMVVELAVAAMEELVRM 323

Query: 294 AQMGEPLWMTSLDGTAAVLNEDEYVRTFPR----GIGPKPTGFKCEASRETAVVIMNHIS 349
            Q  EPLW+ +  G    LN +EYVR FPR    G+G KP G + EASRETA+V+MN ++
Sbjct: 324 VQAEEPLWVRAGGGGREELNYEEYVRQFPRVVGMGMGMKPAGLRTEASRETALVMMNGVN 383

Query: 350 LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESY 409
           LVE L+D +QW+ +F  +VSRA+T+EVLSTGVAGN NGALQ+M AE QV SPLVPTRE Y
Sbjct: 384 LVETLLDASQWAEMFPCVVSRAVTVEVLSTGVAGNRNGALQLMYAELQVLSPLVPTREVY 443

Query: 410 YVRYCKQHGEGTWAVVDVSLDNLRPSPA---VRCRRRPSGCLIQEMPNGYSKVTWVEHVE 466
           ++RYCKQH EG W VVDVS+++LR +P    +RCRRRPSG LIQ+ PNGY++VT VEH E
Sbjct: 444 FLRYCKQHAEGVWGVVDVSVESLRDNPPPSLMRCRRRPSGVLIQDTPNGYARVTCVEHAE 503

Query: 467 VDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS 526
            DDR VH +YK+LV +G AFGA+RWVATL+RQCER+AS++A+NI   ++G + +  GR+S
Sbjct: 504 YDDRAVHRMYKELVGSGMAFGAQRWVATLERQCERVASLLASNIAPRDLGGVPSASGRRS 563

Query: 527 MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSF 586
           MLKLA+RM  +FCAGVSASTAHTWTTLSG+G DDVRVMTRKSVD+PG P GIVLSAATS 
Sbjct: 564 MLKLAQRMTSNFCAGVSASTAHTWTTLSGSGDDDVRVMTRKSVDNPGEPQGIVLSAATSM 623

Query: 587 WLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANS 646
           WL V   RVF+FLRDE  RSEWDILSNGG+V EMAHIA GRD GN VSLL+V    + N+
Sbjct: 624 WLAVSAARVFEFLRDERLRSEWDILSNGGMVTEMAHIAKGRDPGNSVSLLKV---NAMNA 680

Query: 647 SQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSL-- 704
           + SNMLILQESCTD + S VIYAPVDI AMN+VL GGDP YVALLPSGFAILPDG     
Sbjct: 681 NNSNMLILQESCTDVSGSLVIYAPVDIPAMNLVLQGGDPAYVALLPSGFAILPDGPGGGE 740

Query: 705 ----------HGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERI 754
                      GA  G  A  GSL+TVAFQILV SVP+A+LSL SVATVNNLI+CTV+RI
Sbjct: 741 RSGCGGEQAGQGAESGRGAGRGSLVTVAFQILVSSVPSARLSLESVATVNNLISCTVQRI 800

Query: 755 KASLSCESA 763
           +A+L  E +
Sbjct: 801 RAALVAEES 809


>gi|356536039|ref|XP_003536548.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 751

 Score =  884 bits (2283), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/699 (62%), Positives = 531/699 (75%), Gaps = 17/699 (2%)

Query: 77  EGASGDDQEQRPN---KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
           E     D++Q P+   K++R+ RHT HQI EMEAFFKECPHPD+KQRK L RELGL PLQ
Sbjct: 58  EAPPSGDEDQDPDEGFKRRRHTRHTLHQISEMEAFFKECPHPDEKQRKALGRELGLVPLQ 117

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMS 193
           +KFWFQNKRTQ+K+Q ER+EN  LR EN+KLRA+N RYR ALSN SCPNCG PT +GEMS
Sbjct: 118 IKFWFQNKRTQVKSQQERYENNLLRVENDKLRAENSRYRNALSNTSCPNCGAPTTLGEMS 177

Query: 194 FDEHHLRLENARLREEIDRISAIAAKYV-GKPV----VNYPLLSPPVPSRPLELAVGNFG 248
           FDE  LR+ENAR +EEID +S +AAKY  GK       N P     +PSR L+L V N  
Sbjct: 178 FDEQQLRMENARQKEEIDSMSGLAAKYAAGKSASNSYYNMPSNQNQMPSRSLDLGVVNNN 237

Query: 249 AQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGT 308
            QP    GEMYG  D LR +   +  DK +I E+ + A+EE+ ++    +PLW+    G+
Sbjct: 238 TQPVAMVGEMYGGNDPLRELPLLSSFDKDLISEIGLVAVEEINQLTLSADPLWVPGNYGS 297

Query: 309 AAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIV 368
             V+NEDEY+R FPRGIGP   G + E+SR+TA+V+M+H+ LVE+LMDVNQWS +F GIV
Sbjct: 298 E-VINEDEYLRHFPRGIGPTLLGARTESSRQTAIVMMHHMKLVEMLMDVNQWSNMFCGIV 356

Query: 369 SRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS 428
           SRA+T EVLS G    Y+GA QVM+AEFQVPSPLVPTR++Y++R+ K+H   +WAVVD+S
Sbjct: 357 SRAVTHEVLSIGDHARYDGAYQVMSAEFQVPSPLVPTRDNYFIRFSKKHAGQSWAVVDIS 416

Query: 429 LDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGA 488
           +D+LRP    R RRRPSGC+IQE+PNGYSKV WVEHVEVDD  VHNLYK LV++  AFGA
Sbjct: 417 MDHLRPGAVTRTRRRPSGCIIQELPNGYSKVIWVEHVEVDDIEVHNLYKNLVNSTLAFGA 476

Query: 489 KRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAH 548
           KRW+A ++R CE LA  MATNIP G + VIT+ +GRKSM+KLAERMV+SF  GV ASTA+
Sbjct: 477 KRWIAAIERTCEHLARAMATNIPQGALCVITSHEGRKSMMKLAERMVLSFSTGVGASTAN 536

Query: 549 TWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
            WT L     ++VRVMTRKSVDDPGRP GIVLSAATS WLPVP +RVFDFLR ENTR++W
Sbjct: 537 AWTPLP-LDLENVRVMTRKSVDDPGRPSGIVLSAATSLWLPVPARRVFDFLRSENTRNQW 595

Query: 609 DILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIY 668
           DILS+G  V E+AHIA GRD GN VSLLRVN   + N +Q+NMLILQESC D T SFV+Y
Sbjct: 596 DILSSGAQVNELAHIAKGRDHGNSVSLLRVN---TQNVAQNNMLILQESCIDATGSFVVY 652

Query: 669 APVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH---GANIGEAASG-GSLLTVAFQ 724
           AP+D+ +MN+VL GG+PDYVALLPSGFA+LPDG +L+   G       SG G LLTVAFQ
Sbjct: 653 APIDLASMNLVLGGGNPDYVALLPSGFAVLPDGPALNVVPGPVCEVVGSGRGCLLTVAFQ 712

Query: 725 ILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
           ILVDS PTAKLS+GSV TVNNLI  TVERIK S++ + A
Sbjct: 713 ILVDSTPTAKLSVGSVTTVNNLIKRTVERIKDSVTLDGA 751


>gi|109729914|tpg|DAA05771.1| TPA_inf: class IV HD-Zip protein HDZ41 [Selaginella moellendorffii]
          Length = 815

 Score =  868 bits (2244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/716 (59%), Positives = 538/716 (75%), Gaps = 34/716 (4%)

Query: 77  EGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 134
           EGAS +DQE   +P +K+R+HRHT  QIQEME  FKECPHPD+KQR +LSRELGLEP QV
Sbjct: 104 EGASSEDQEPSDQPPRKRRFHRHTLRQIQEMEMVFKECPHPDEKQRMQLSRELGLEPRQV 163

Query: 135 KFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSF 194
           KFWFQN+RTQMK   ER EN+ LR ENE+LR++N+  REAL NA+CP+CGGP  +GEMS+
Sbjct: 164 KFWFQNRRTQMKAHQERAENSMLRAENERLRSENIAMREALKNATCPHCGGPATLGEMSY 223

Query: 195 DEHHLRLENARLREEIDRISAIAAKYVGKPVVNYP---LLSPPVPSRPLELAVGNFGAQP 251
           DE  LR+ENA L++E+DR+S++AAKY+ KP    P    +   +P   L+ +   FG Q 
Sbjct: 224 DEQQLRIENAHLKDELDRVSSLAAKYLSKPGGGAPHGLSVQTSLPGTSLDPSAAAFGPQS 283

Query: 252 GIGGGEMYGAADLLRSISAP---TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGT 308
                   G + +L   + P   ++ +KP++ ELA+ AMEEL+ +AQ  EPLW+   +G 
Sbjct: 284 NSALAVTPGPS-MLELATRPGGLSQVEKPLVAELAIIAMEELLALAQSREPLWILEENGA 342

Query: 309 AAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIV 368
              LN +EY++ F RG+GP P G K E +R+T +V+MN  +LV+ +MD  +W  +FS I+
Sbjct: 343 KESLNGEEYMQQFSRGLGPTPVGLKAEVTRDTGLVMMNGAALVDTIMDAGRWMDMFSCII 402

Query: 369 SRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS 428
           SRA+T EVLSTGV GN+N ALQ+M AEFQV SPLVPTRE+Y++RYCKQH EG WA+VDVS
Sbjct: 403 SRALTSEVLSTGVGGNWNNALQLMYAEFQVLSPLVPTREAYFLRYCKQHAEGVWAIVDVS 462

Query: 429 LDNLR--PSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAF 486
           +D LR  P P +R R RPSG LIQ+MPNGYSKVT ++H+E DDR V+N+Y+ LVS+G AF
Sbjct: 463 VDGLRENPPPQLRNRLRPSGFLIQDMPNGYSKVTILQHMEYDDRQVNNMYRGLVSSGLAF 522

Query: 487 GAKRWVATLDRQCERLASVMATNIPTGEVG---------------VITNQDGRKSMLKLA 531
           GAKRW+ATL RQCERLA ++ATNI   ++G               VI+N  GR+SMLKLA
Sbjct: 523 GAKRWLATLQRQCERLAVLLATNISPRDLGVSSYGPADQSLLFFAVISNATGRRSMLKLA 582

Query: 532 ERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVP 591
           +RM  +FCAGVSAST HTWTTLSG+G DDVRVMTRKS+D+PG PPGIVLSAATS W+PV 
Sbjct: 583 QRMTNNFCAGVSASTVHTWTTLSGSGEDDVRVMTRKSIDNPGEPPGIVLSAATSLWMPVS 642

Query: 592 PKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNM 651
           P+RVF+FLRD+  RSEWDILSNGG VQEMAHIA G D GN +SLLRVN L   N+SQSNM
Sbjct: 643 PQRVFEFLRDDRLRSEWDILSNGGSVQEMAHIAKGHDPGNVISLLRVNAL---NTSQSNM 699

Query: 652 LILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPD-----GTSLHG 706
           LILQES TD + S ++YAPVDI AMN+V+ GGDP YVALLPSGFAILP+     GT+   
Sbjct: 700 LILQESSTDESGSLIVYAPVDIPAMNLVMQGGDPAYVALLPSGFAILPEGPRSIGTTPET 759

Query: 707 ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           ++   ++  G LLTVAFQILV +VPTAKL+L SV TVN+LI+CTV+RIK +LSCE+
Sbjct: 760 SSRASSSEPGCLLTVAFQILVSNVPTAKLNLESVTTVNSLISCTVQRIKTALSCET 815


>gi|222640035|gb|EEE68167.1| hypothetical protein OsJ_26285 [Oryza sativa Japonica Group]
          Length = 577

 Score =  867 bits (2241), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/582 (75%), Positives = 500/582 (85%), Gaps = 19/582 (3%)

Query: 192 MSFDEHHLRLENARLREEIDRISAIAAKYVGKP-VVNYPLLSPPVP----SRPLELAVGN 246
           MSFDEHHLR+ENARLR+EIDRIS IAAK+VGKP +V++P+LS P+       PL+LA G 
Sbjct: 1   MSFDEHHLRVENARLRDEIDRISGIAAKHVGKPPIVSFPVLSSPLAVAAARSPLDLA-GA 59

Query: 247 FGA-QPGIGGGEMYGAA-DLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTS 304
           +G   PG+   +M+G A DLLR +  P +ADKPMI+ELAVAAM+EL++MAQ+ EPLW +S
Sbjct: 60  YGVVTPGL---DMFGGAGDLLRGVH-PLDADKPMIVELAVAAMDELVQMAQLDEPLWSSS 115

Query: 305 LDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVF 364
            +  AA+L+E+EY R FPRG+GPK  G K EASR  AVVIM H +LVEILMDVNQ++TVF
Sbjct: 116 SEPAAALLDEEEYARMFPRGLGPKQYGLKSEASRHGAVVIMTHSNLVEILMDVNQFATVF 175

Query: 365 SGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAV 424
           S IVSRA T EVLSTGVAGNYNGALQVM+ EFQVPSPLVPTRESY+VRYCK + +GTWAV
Sbjct: 176 SSIVSRASTHEVLSTGVAGNYNGALQVMSMEFQVPSPLVPTRESYFVRYCKNNSDGTWAV 235

Query: 425 VDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGN 484
           VDVSLD+LRPSP  +CRRRPSGCLIQEMPNGYSKVTWVEHVEVDD  VHN+YK LV++G 
Sbjct: 236 VDVSLDSLRPSPVQKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDSSVHNIYKPLVNSGL 295

Query: 485 AFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSA 544
           AFGAKRWV TLDRQCERLAS MA+NIP G++GVIT+ +GRKSMLKLAERMV SFC GV+A
Sbjct: 296 AFGAKRWVGTLDRQCERLASAMASNIPNGDLGVITSVEGRKSMLKLAERMVASFCGGVTA 355

Query: 545 STAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENT 604
           S AH WTTLSG+GA+DVRVMTRKSVDDPGRPPGIVL+AATSFWLPVPP  VFDFLRDE +
Sbjct: 356 SVAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLPVPPAAVFDFLRDETS 415

Query: 605 RSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTAS 664
           RSEWDILSNGG VQEMAHIANGRD GN VSLLRVN   SANS+QSNMLILQESCTD + S
Sbjct: 416 RSEWDILSNGGAVQEMAHIANGRDHGNSVSLLRVN---SANSNQSNMLILQESCTDASGS 472

Query: 665 FVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHG-ANIGE---AASGGSLLT 720
           +V+YAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG S +  A +GE    + GGSLLT
Sbjct: 473 YVVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGPSGNAQAAVGENGSGSGGGSLLT 532

Query: 721 VAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           VAFQILVDSVPTAKLSLGSVATVN+LIACTVERIKA++  +S
Sbjct: 533 VAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVCRDS 574


>gi|356574388|ref|XP_003555330.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 729

 Score =  867 bits (2240), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/732 (61%), Positives = 548/732 (74%), Gaps = 22/732 (3%)

Query: 47  LDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQE-QRPNKKKRYHRHTQHQIQEM 105
           + + + +SE+   R REE+  S K  +     +  DDQ+ +   K++R+ RHT HQI EM
Sbjct: 1   MSLQRTSSENNSGRNREEQEPSNKETTMEAPASGDDDQDLEEGFKRRRHTRHTHHQISEM 60

Query: 106 EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLR 165
           E+FFK CPHPD+KQRK L RELGLEPLQ+KFWFQNKRTQ+KTQ ER+EN  LR EN+KLR
Sbjct: 61  ESFFKGCPHPDEKQRKALGRELGLEPLQIKFWFQNKRTQVKTQQERYENNLLRVENDKLR 120

Query: 166 ADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPV 225
           A+N RYR AL+NA CP+CGGPTA+GEMSFDE  LR+ENARL+EEI  +S  AAK+ GK  
Sbjct: 121 AENRRYRNALANALCPSCGGPTALGEMSFDEQQLRIENARLKEEIASMSGPAAKHAGKSG 180

Query: 226 VNYPLLSPP---VPSRPLELAVGNFGAQPGIGG----------GEMYGAADLLRSISAPT 272
            N     P    +PSR L+L VGN                   GE+YG  D LR +   +
Sbjct: 181 SNSYCNMPSQNQMPSRSLDLGVGNNNKNNNFVAVAQAQPAAMVGEIYGGNDPLRELPLFS 240

Query: 273 EADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGF 332
             DK +I E+ + A+EE+ R++  G+PLW+    G+  V+NEDEY+R FPRGIGP   G 
Sbjct: 241 CFDKTLIGEIGLVAIEEINRLSLSGDPLWVPGNYGSE-VVNEDEYLRVFPRGIGPTLLGA 299

Query: 333 KCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVM 392
           + E+SR+TA+VIM+H+ LVE+LMDVNQWS +F GIVSRA+T EVLSTG    Y+GA QVM
Sbjct: 300 RTESSRQTAIVIMHHMKLVEMLMDVNQWSNMFCGIVSRAVTHEVLSTGETIRYDGACQVM 359

Query: 393 TAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEM 452
           +AEFQVPSPLVPTR++Y++R+CK+H   +WAVVD S+D+LRP    + RRRPSGC+IQE+
Sbjct: 360 SAEFQVPSPLVPTRDNYFIRFCKKHQGQSWAVVDFSMDHLRPGAITKIRRRPSGCIIQEL 419

Query: 453 PNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPT 512
           PNGYSKV WVEHVEVDD  VHNLYK LV +  AFGAKRWVA +DR CERLAS MATNIP 
Sbjct: 420 PNGYSKVIWVEHVEVDDSEVHNLYKNLVDSTLAFGAKRWVAAIDRTCERLASAMATNIPQ 479

Query: 513 GEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDP 572
           G + VIT+ + RKSM+KLAERMV+SFC GV ASTA+ WT L  +G +DVRVMTRKSVDDP
Sbjct: 480 GALCVITSHESRKSMMKLAERMVLSFCTGVGASTANAWTPLP-SGLEDVRVMTRKSVDDP 538

Query: 573 GRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNC 632
           GRPPGIVLSAATS WLPVP +RVF+FLR ENTR++WDILS G  V E+AHIANGRD GNC
Sbjct: 539 GRPPGIVLSAATSLWLPVPARRVFEFLRSENTRNQWDILSTGAQVNELAHIANGRDHGNC 598

Query: 633 VSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLP 692
           VSLLRVN   + N  Q+NMLILQES  D T SFVIYAP+D+ A+NVVL GG+PDYVALLP
Sbjct: 599 VSLLRVN---TQNVGQNNMLILQESFIDATGSFVIYAPIDVAAINVVLGGGNPDYVALLP 655

Query: 693 SGFAIL--PDGTSLHGANIGEAASGGS-LLTVAFQILVDSVPTAKLSLGSVATVNNLIAC 749
           SGFA+L    G +     I EA SGG  LLTVAFQILVDS PT+K+S+GSV TVN+LI  
Sbjct: 656 SGFAVLPDGPGLNGGPGPICEAGSGGGCLLTVAFQILVDSAPTSKISVGSVTTVNSLIKR 715

Query: 750 TVERIKASLSCE 761
           TVE+I+ ++S +
Sbjct: 716 TVEKIRDAVSLD 727


>gi|147811086|emb|CAN61351.1| hypothetical protein VITISV_023503 [Vitis vinifera]
          Length = 784

 Score =  864 bits (2233), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/794 (55%), Positives = 564/794 (71%), Gaps = 42/794 (5%)

Query: 1   MPTGVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIAR 60
           M TG +   R +  ++ ++     + SS GL+L+  T+M EGQ     + +N       R
Sbjct: 1   MATGAIAQPRLVSPSLAKS-----MFSSPGLSLALQTSM-EGQGEVTRLAENFESGGGRR 54

Query: 61  LREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK 118
            RE+E +S +SGS+N +GASGDDQ+    P +KKRYHRHT  QIQE+EA FKECPHPD+K
Sbjct: 55  SREDEHES-RSGSDNMDGASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEK 113

Query: 119 QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNA 178
           QR ELSR L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRA+NM  R+A+ N 
Sbjct: 114 QRLELSRRLSLETRQVKFWFQNRRTQMKTQLERHENSILRQENDKLRAENMSIRDAMRNP 173

Query: 179 SCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYP-LLSPPVPS 237
            C NCGGP  IG++S +E HLR+ENARL++E+DR+ A+A K++G+P+ +    ++P +PS
Sbjct: 174 ICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLASSMAPAMPS 233

Query: 238 RPLELAVGN--FGAQPGIG-----GGEMYGAADLLRSISAPTEA----------DKPMII 280
             LEL VG+  FG    +      G +  G       ++ PT            ++ M +
Sbjct: 234 SSLELGVGSNGFGGLSTVATTLPLGHDFGGGISSTLPVAPPTSTTGVTGLERSLERSMFL 293

Query: 281 ELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRET 340
           ELA+AAM+EL++MAQ  EPLW+ SL+G   +LN +EY+RTF   IG KP+GF  E++RET
Sbjct: 294 ELALAAMDELVKMAQTDEPLWVRSLEGGREILNLEEYMRTFTPCIGMKPSGFVTESTRET 353

Query: 341 AVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPS 400
            +VI+N ++LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M AE QV S
Sbjct: 354 GMVIINSLALVETLMDSNRWAEMFPCMIARTSTTDVISSGMGGTRNGALQLMHAELQVLS 413

Query: 401 PLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA----VRCRRRPSGCLIQEMPNGY 456
           PLVP RE  ++R+CKQH EG WAVVDVS+D +R +      V CRR PSGC++Q+MPNGY
Sbjct: 414 PLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSVAPTFVNCRRLPSGCVVQDMPNGY 473

Query: 457 SKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVG 516
           SKVTWVEH E D+  VH LY+ L+ +G  FGA+RWVATL RQCE LA +M++ +PT +  
Sbjct: 474 SKVTWVEHAEYDESAVHQLYRPLLGSGMGFGAQRWVATLQRQCECLAILMSSTVPTRDHT 533

Query: 517 VITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGRP 575
                 GR+SMLKLA+RM  +FCAGV AST H W  L     D DVRVMTRKSVDDPG P
Sbjct: 534 AAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLCAGNVDEDVRVMTRKSVDDPGEP 593

Query: 576 PGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSL 635
           PGIVLSAATS WLPV P+R+FDFLRDE  RSEWDILSNGG +QEMAHIA G+D GNCVSL
Sbjct: 594 PGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSL 653

Query: 636 LRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGF 695
           LR + +   N++QS+MLILQE+C D   S V+YAPVDI AM+VV+NGGD  YVALLPSGF
Sbjct: 654 LRASAM---NANQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGF 710

Query: 696 AILPDGTSLHGANIGEAAS-------GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIA 748
           AI+PDG    G N G   +        GSLLTVAFQILV+S+PTAKL++ SV TVNNLI+
Sbjct: 711 AIVPDGPGSRGPNSGXHTNSGGPNRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLIS 770

Query: 749 CTVERIKASLSCES 762
           CTV++IKA+L CES
Sbjct: 771 CTVQKIKAALHCES 784


>gi|359489358|ref|XP_002272264.2| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Vitis
           vinifera]
          Length = 811

 Score =  864 bits (2232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/794 (55%), Positives = 565/794 (71%), Gaps = 42/794 (5%)

Query: 1   MPTGVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIAR 60
           M TG +   R +  ++ ++     + SS GL+L+  T+M EGQ     + +N       R
Sbjct: 28  MATGAIAQPRLVSPSLAKS-----MFSSPGLSLALQTSM-EGQGEVTRLAENFESGGGRR 81

Query: 61  LREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK 118
            RE+E +S +SGS+N +GASGDDQ+    P +KKRYHRHT  QIQE+EA FKECPHPD+K
Sbjct: 82  SREDEHES-RSGSDNMDGASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEK 140

Query: 119 QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNA 178
           QR ELSR L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRA+NM  R+A+ N 
Sbjct: 141 QRLELSRRLSLETRQVKFWFQNRRTQMKTQLERHENSILRQENDKLRAENMSIRDAMRNP 200

Query: 179 SCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYP-LLSPPVPS 237
            C NCGGP  IG++S +E HLR+ENARL++E+DR+ A+A K++G+P+ +    ++P +PS
Sbjct: 201 ICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLASSMAPAMPS 260

Query: 238 RPLELAVGN--FGAQPGIG-----GGEMYGAADLLRSISAPTEA----------DKPMII 280
             LEL VG+  FG    +      G +  G       ++ PT            ++ M +
Sbjct: 261 SSLELGVGSNGFGGLSTVATTLPLGHDFGGGISSTLPVAPPTSTTGVTGLERSLERSMFL 320

Query: 281 ELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRET 340
           ELA+AAM+EL++MAQ  EPLW+ SL+G   +LN +EY+RTF   IG KP+GF  E++RET
Sbjct: 321 ELALAAMDELVKMAQTDEPLWVRSLEGGREILNLEEYMRTFTPCIGMKPSGFVTESTRET 380

Query: 341 AVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPS 400
            +VI+N ++LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M AE QV S
Sbjct: 381 GMVIINSLALVETLMDSNRWAEMFPCMIARTSTTDVISSGMGGTRNGALQLMHAELQVLS 440

Query: 401 PLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA----VRCRRRPSGCLIQEMPNGY 456
           PLVP RE  ++R+CKQH EG WAVVDVS+D +R +      V CRR PSGC++Q+MPNGY
Sbjct: 441 PLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSVAPTFVNCRRLPSGCVVQDMPNGY 500

Query: 457 SKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVG 516
           SKVTWVEH E D+  VH LY+ L+ +G  FGA+RWVATL RQCE LA +M++ +PT +  
Sbjct: 501 SKVTWVEHAEYDESAVHQLYRPLLGSGMGFGAQRWVATLQRQCECLAILMSSTVPTRDHT 560

Query: 517 VITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGRP 575
                 GR+SMLKLA+RM  +FCAGV AST H W  L     D DVRVMTRKSVDDPG P
Sbjct: 561 AAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLCAGNVDEDVRVMTRKSVDDPGEP 620

Query: 576 PGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSL 635
           PGIVLSAATS WLPV P+R+FDFLRDE  RSEWDILSNGG +QEMAHIA G+D GNCVSL
Sbjct: 621 PGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSL 680

Query: 636 LRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGF 695
           LR + +   N++QS+MLILQE+C D   S V+YAPVDI AM+VV+NGGD  YVALLPSGF
Sbjct: 681 LRASAM---NANQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGF 737

Query: 696 AILPDGTSLHGANIG-EAASG------GSLLTVAFQILVDSVPTAKLSLGSVATVNNLIA 748
           AI+PDG    G N G    SG      GSLLTVAFQILV+S+PTAKL++ SV TVNNLI+
Sbjct: 738 AIVPDGPGSRGPNSGVHTNSGGPNRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLIS 797

Query: 749 CTVERIKASLSCES 762
           CTV++IKA+L CES
Sbjct: 798 CTVQKIKAALHCES 811


>gi|449454480|ref|XP_004144982.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
 gi|449473159|ref|XP_004153804.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
 gi|449522284|ref|XP_004168157.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
          Length = 841

 Score =  862 bits (2227), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/745 (58%), Positives = 554/745 (74%), Gaps = 48/745 (6%)

Query: 60  RLREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           R REEE +S +SGS+N +G SGDDQ+    P +KKRYHRHT  QIQE+EA FKECPHPD+
Sbjct: 103 RGREEEHES-RSGSDNMDGGSGDDQDAADNPPRKKRYHRHTPQQIQELEAVFKECPHPDE 161

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSN 177
           KQR ELSR L LE  QVKFWFQN+RTQMKTQ ERHENT LR EN+KLRA+NM  R+A+ N
Sbjct: 162 KQRLELSRRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRN 221

Query: 178 ASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYP-LLSPPVP 236
             C NCGGP  IGE+S +E  LR+ENARL++E+DR+ A+A K++G+P+ +    ++PP+P
Sbjct: 222 PICSNCGGPAIIGEISLEEQQLRIENARLKDELDRVCALAGKFLGRPISSLANSIAPPLP 281

Query: 237 SRPLELAVGN--FGA---------QPGIGGGEMYGAADLLRSISAPT-------EADKPM 278
           S  LEL VG+  FG+          P  GGG + G   ++++ + PT         ++ M
Sbjct: 282 SSSLELGVGSNGFGSLTMATSMPIGPDFGGG-LSGNLAVVQAPARPTPGMGLDRSVERSM 340

Query: 279 IIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASR 338
           ++ELA+AAM+EL++MAQ  EPLW+ SL+G   +LN++EY+RTF   IG KP GF  EASR
Sbjct: 341 LLELALAAMDELVKMAQTDEPLWIGSLEGGREILNQEEYMRTFTPCIGMKPNGFVTEASR 400

Query: 339 ETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQV 398
           E+ +VI+N ++LVE LMD N+W+ +F  +++R  T +V+STG+ G  NGALQ+M AE QV
Sbjct: 401 ESGMVIINSLALVETLMDSNRWAEMFPCMIARTTTTDVISTGMGGTRNGALQLMHAELQV 460

Query: 399 PSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA------VRCRRRPSGCLIQEM 452
            SPLVP RE  ++R+CKQH EG WAVVDVS+D +R +P         CRR PSGC++Q+M
Sbjct: 461 LSPLVPVREVNFLRFCKQHAEGVWAVVDVSVDAMRETPTGGGSSFGNCRRLPSGCVVQDM 520

Query: 453 PNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPT 512
           PNGYSKVTWVEH E DD  VH LY+ L+S+G  FGA+RWV TL RQCE LA +M++ +P 
Sbjct: 521 PNGYSKVTWVEHAEYDDSQVHQLYRPLLSSGMGFGAQRWVTTLQRQCECLAILMSSAVPI 580

Query: 513 GEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTL-SGTGADDVRVMTRKSVDD 571
            +   IT   GR+SMLKLA+RM  +FCAGV AST H W  L +G+  +DVRVMTRKSVDD
Sbjct: 581 RDHTAIT-AGGRRSMLKLAQRMTANFCAGVCASTVHKWNKLNAGSVDEDVRVMTRKSVDD 639

Query: 572 PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGN 631
           PG PPGIVLSAATS WLPV P+R+FDFLRDE  RSEWDILSNGG +QEMAHIA G+D GN
Sbjct: 640 PGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGN 699

Query: 632 CVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALL 691
           CVSLLR + +   N++QS+MLILQE+C D   S V+YAPVDI AM+VV+NGGD  YVALL
Sbjct: 700 CVSLLRASAM---NANQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALL 756

Query: 692 PSGFAILPDG------TSLHGANI--GE------AASGGSLLTVAFQILVDSVPTAKLSL 737
           PSGFAI+PDG      T+ +G++   GE      AA GGSLLTVAFQILV+S+PTAKL++
Sbjct: 757 PSGFAIVPDGAVTGGLTATNGSSPSGGEGPQSQRAAGGGSLLTVAFQILVNSLPTAKLTV 816

Query: 738 GSVATVNNLIACTVERIKASLSCES 762
            SV TVNNLI+CTV++IKA+L CE+
Sbjct: 817 ESVETVNNLISCTVQKIKAALQCET 841


>gi|296089063|emb|CBI38766.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score =  861 bits (2225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/777 (56%), Positives = 557/777 (71%), Gaps = 48/777 (6%)

Query: 1   MPTGVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIAR 60
           M TG +   R +  ++ ++     + SS GL+L+  T+M EGQ     + +N       R
Sbjct: 28  MATGAIAQPRLVSPSLAKS-----MFSSPGLSLALQTSM-EGQGEVTRLAENFESGGGRR 81

Query: 61  LREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK 118
            RE+E +S +SGS+N +GASGDDQ+    P +KKRYHRHT  QIQE+EA FKECPHPD+K
Sbjct: 82  SREDEHES-RSGSDNMDGASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEK 140

Query: 119 QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNA 178
           QR ELSR L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRA+NM  R+A+ N 
Sbjct: 141 QRLELSRRLSLETRQVKFWFQNRRTQMKTQLERHENSILRQENDKLRAENMSIRDAMRNP 200

Query: 179 SCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYP-LLSPPVPS 237
            C NCGGP  IG++S +E HLR+ENARL++E+DR+ A+A K++G+P+ +    ++P +PS
Sbjct: 201 ICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLASSMAPAMPS 260

Query: 238 RPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMG 297
             LEL VG+ G   GI    M+                    +ELA+AAM+EL++MAQ  
Sbjct: 261 SSLELGVGSNG---GISSTSMF--------------------LELALAAMDELVKMAQTD 297

Query: 298 EPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDV 357
           EPLW+ SL+G   +LN +EY+RTF   IG KP+GF  E++RET +VI+N ++LVE LMD 
Sbjct: 298 EPLWVRSLEGGREILNLEEYMRTFTPCIGMKPSGFVTESTRETGMVIINSLALVETLMDS 357

Query: 358 NQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQH 417
           N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M AE QV SPLVP RE  ++R+CKQH
Sbjct: 358 NRWAEMFPCMIARTSTTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQH 417

Query: 418 GEGTWAVVDVSLDNLRPSPA----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVH 473
            EG WAVVDVS+D +R +      V CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH
Sbjct: 418 AEGVWAVVDVSIDTIRETSVAPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESAVH 477

Query: 474 NLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAER 533
            LY+ L+ +G  FGA+RWVATL RQCE LA +M++ +PT +        GR+SMLKLA+R
Sbjct: 478 QLYRPLLGSGMGFGAQRWVATLQRQCECLAILMSSTVPTRDHTAAITAGGRRSMLKLAQR 537

Query: 534 MVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPP 592
           M  +FCAGV AST H W  L     D DVRVMTRKSVDDPG PPGIVLSAATS WLPV P
Sbjct: 538 MTDNFCAGVCASTVHKWNKLCAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSP 597

Query: 593 KRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNML 652
           +R+FDFLRDE  RSEWDILSNGG +QEMAHIA G+D GNCVSLLR + +   N++QS+ML
Sbjct: 598 QRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAM---NANQSSML 654

Query: 653 ILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIG-E 711
           ILQE+C D   S V+YAPVDI AM+VV+NGGD  YVALLPSGFAI+PDG    G N G  
Sbjct: 655 ILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGPNSGVH 714

Query: 712 AASG------GSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
             SG      GSLLTVAFQILV+S+PTAKL++ SV TVNNLI+CTV++IKA+L CES
Sbjct: 715 TNSGGPNRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES 771


>gi|224130112|ref|XP_002320755.1| predicted protein [Populus trichocarpa]
 gi|222861528|gb|EEE99070.1| predicted protein [Populus trichocarpa]
          Length = 823

 Score =  860 bits (2222), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/805 (55%), Positives = 568/805 (70%), Gaps = 54/805 (6%)

Query: 1   MPTGVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIAR 60
           MPTG ++  R +  +I ++     + +S GL+L+     ++GQ     M++N   S   R
Sbjct: 30  MPTGAIVQPRLVSPSITKS-----MFNSPGLSLALQQPNIDGQGDITRMSENFETSVGRR 84

Query: 61  LREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK 118
            REEE +S +SGS+N +GASGDDQ+    P +KKRYHRHT  QIQE+EA FKECPHPD+K
Sbjct: 85  SREEEHES-RSGSDNMDGASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEK 143

Query: 119 QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNA 178
           QR ELSR L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRA+NM  R+A+ N 
Sbjct: 144 QRLELSRRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNP 203

Query: 179 SCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYP-LLSPPVPS 237
            C NCGGP  IG++S +E HLR+ENARL++E+DR+ A+A K++G+P+ +    L PP+P+
Sbjct: 204 MCSNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLASSLGPPMPN 263

Query: 238 RPLELAVGNFGAQ------------PGIGGGEMYGAADLLRSISAPTEA--------DKP 277
             LEL VG+ G              P   GG + GA  +L      T          ++ 
Sbjct: 264 SSLELGVGSNGFAGLSTVATTLPLGPDFVGG-ISGALPVLTQTRPATTGVTGIGRSLERS 322

Query: 278 MIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEAS 337
           M +ELA+AAM+EL++MAQ  EPLW+ S DG   +LN +EY+RT    IG KP+GF  EAS
Sbjct: 323 MFLELALAAMDELVKMAQTDEPLWIRSFDGGREILNHEEYLRTITPCIGMKPSGFVSEAS 382

Query: 338 RETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQ 397
           RET +VI+N ++LVE LMD N+W+ +F  +++R  T +V++ G+ G  NG+LQ+M AE Q
Sbjct: 383 RETGMVIINSLALVETLMDSNRWAEMFPCVIARTSTTDVIANGMGGTRNGSLQLMHAELQ 442

Query: 398 VPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR----PSPA-VRCRRRPSGCLIQEM 452
           V SPLVP RE  ++R+CKQH EG WAVVDVS+D +R     SP  V CRR PSGC++Q+M
Sbjct: 443 VLSPLVPVREVNFLRFCKQHAEGVWAVVDVSVDTIRETSGASPTFVNCRRLPSGCVVQDM 502

Query: 453 PNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPT 512
           PNGYSKVTW+EH E D+   H LY+ L+S+G  FGA+RW+ATL RQ E LA +M++N+P+
Sbjct: 503 PNGYSKVTWIEHAEYDESQTHQLYRPLISSGMGFGAQRWIATLQRQSECLAILMSSNVPS 562

Query: 513 GEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDD 571
            +   IT   GR+SMLKLA+RM  +FCAGV AST H W  L+    D DVRVMTRKSVDD
Sbjct: 563 RDHTAIT-ASGRRSMLKLAQRMTANFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDD 621

Query: 572 PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGN 631
           PG PPGIVLSAATS WLPV P+R+FDFLRDE  RSEWDILSNGG +QEMAHIA G+D GN
Sbjct: 622 PGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGN 681

Query: 632 CVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALL 691
           CVSLLR + +   N++QS+MLILQE+C D   S V+YAPVDI AM+VV+NGGD  YVALL
Sbjct: 682 CVSLLRASAM---NANQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALL 738

Query: 692 PSGFAILPDGTSLHG---ANIGEAAS-----------GGSLLTVAFQILVDSVPTAKLSL 737
           PSGFAI+PDG    G    N G  A+            GSLLTVAFQILV+S+PTAKL++
Sbjct: 739 PSGFAIVPDGPGSRGPPTTNGGPTANNNSNGGGPERVSGSLLTVAFQILVNSLPTAKLTV 798

Query: 738 GSVATVNNLIACTVERIKASLSCES 762
            SV TVNNLI+CTV++IKA+L CES
Sbjct: 799 ESVETVNNLISCTVQKIKAALQCES 823


>gi|255541474|ref|XP_002511801.1| homeobox protein, putative [Ricinus communis]
 gi|223548981|gb|EEF50470.1| homeobox protein, putative [Ricinus communis]
          Length = 825

 Score =  855 bits (2210), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/805 (54%), Positives = 563/805 (69%), Gaps = 58/805 (7%)

Query: 1   MPTGVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQ-LHPLDMTQNTSESEIA 59
           MPTG +   R +  +  ++     + +S GL+L+     ++GQ  H   M +N       
Sbjct: 36  MPTGAIAQPRLLSPSFTKS-----MFNSPGLSLALQQPNIDGQGDHVARMAENFETIGGR 90

Query: 60  RLREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           R REEE +S +SGS+N +GASGDDQ+    P +KKRYHRHT  QIQE+EA FKECPHPD+
Sbjct: 91  RSREEEHES-RSGSDNMDGASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDE 149

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSN 177
           KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRA+NM  R+A+ N
Sbjct: 150 KQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMTIRDAMRN 209

Query: 178 ASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYP-LLSPPVP 236
             C NCGGP  IG++S +E HLR+ENARL++E+DR+ A+A K++G+P+ +    + PP+P
Sbjct: 210 PICSNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLASSIGPPMP 269

Query: 237 SRPLELAVGNFGAQ------------PGIGGG------------EMYGAADLLRSISAPT 272
           +  LEL VGN G              P  GGG               G   L RS+    
Sbjct: 270 NSSLELGVGNNGFAGLSTVATTLPLGPDFGGGISTLNVVTQTRPGNTGVTGLDRSL---- 325

Query: 273 EADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGF 332
             ++ M +ELA+AAM+EL++MAQ  +PLW+ SL+G   +LN +EYVRTF   IG KP+GF
Sbjct: 326 --ERSMFLELALAAMDELVKMAQTDDPLWIRSLEGGREMLNHEEYVRTFTPCIGMKPSGF 383

Query: 333 KCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVM 392
             EASRE  +VI+N ++LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NG+LQ+M
Sbjct: 384 VFEASREAGMVIINSLALVETLMDSNRWAEMFPCVIARTSTTDVISSGMGGTRNGSLQLM 443

Query: 393 TAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPS---PAV-RCRRRPSGCL 448
            AE QV SPLVP RE  ++R+CKQH EG WAVVDVS+D +R +   PA   CRR PSGC+
Sbjct: 444 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGGPAFANCRRLPSGCV 503

Query: 449 IQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMAT 508
           +Q+MPNGYSKVTWVEH E D+  +H LY+ L+S+G  FGA+RWVATL RQCE LA +M++
Sbjct: 504 VQDMPNGYSKVTWVEHAEYDESPIHQLYRPLISSGMGFGAQRWVATLQRQCECLAILMSS 563

Query: 509 NIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRK 567
            +P  +        GR+SMLKLA+RM  +FCAGV AST H W  L+    D DVRVMTRK
Sbjct: 564 TVPARDHTAAITASGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRK 623

Query: 568 SVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGR 627
           SVDDPG PPGIVLSAATS WLPV P+R+FDFLRDE  RSEWDILSNGG +QEMAHIA G+
Sbjct: 624 SVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQ 683

Query: 628 DTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDY 687
           D GNCVSLLR + +   N++QS+MLILQE+C D   S V+YAPVDI AM+VV+NGGD  Y
Sbjct: 684 DHGNCVSLLRASAM---NANQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAY 740

Query: 688 VALLPSGFAILPDGTSLHGANIGEAAS----------GGSLLTVAFQILVDSVPTAKLSL 737
           VALLPSGFAI+PDG    G+   +              GSLLTVAFQILV+S+PTAKL++
Sbjct: 741 VALLPSGFAIVPDGPGSRGSPTNQNGGGNNGGGPNRVSGSLLTVAFQILVNSLPTAKLTV 800

Query: 738 GSVATVNNLIACTVERIKASLSCES 762
            SV TVNNLI+CTV++IKA+L CES
Sbjct: 801 ESVETVNNLISCTVQKIKAALQCES 825


>gi|356532068|ref|XP_003534596.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 820

 Score =  853 bits (2204), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/754 (57%), Positives = 546/754 (72%), Gaps = 49/754 (6%)

Query: 49  MTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEME 106
           M +N  ++ + R REEE +S +SGS+N +G SGDD +    P +KKRYHRHT  QIQE+E
Sbjct: 76  MPENFEQNGLRRNREEEHES-RSGSDNMDGGSGDDFDAADNPPRKKRYHRHTPQQIQELE 134

Query: 107 AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRA 166
           + FKECPHPD+KQR ELSR L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRA
Sbjct: 135 SLFKECPHPDEKQRLELSRRLNLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRA 194

Query: 167 DNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVV 226
           +NM  REA+ N  C NCGGP  IGE+S +E HLR+ENARL++E+DR+ A+A K++G+P+ 
Sbjct: 195 ENMSMREAMRNPICTNCGGPAMIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPIS 254

Query: 227 NYP-LLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAA--DLLRSISAPTEADKP------ 277
           +    + PP+P+  LEL VG+     G GG     +   D    IS+P     P      
Sbjct: 255 SLTGSIGPPLPNSSLELGVGS----NGFGGLSTVPSTMPDFGVGISSPLAMVSPSSTRPT 310

Query: 278 ----------------------MIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNED 315
                                 +++ELA+AAM+EL++MAQ  EPLW+ SL+G   +LN D
Sbjct: 311 TTATTTLVTPPSGFDNRSIERSIVLELALAAMDELVKMAQTDEPLWIRSLEGGREILNHD 370

Query: 316 EYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLE 375
           EY RT    IG +P GF  EASR+T +VI+N ++LVE LMD N+WS +F  +++R  T E
Sbjct: 371 EYTRTITPCIGLRPNGFVTEASRQTGMVIINSLALVETLMDSNRWSEMFPCMIARTSTAE 430

Query: 376 VLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPS 435
           V+S G+ G  NGALQ+M AE QV SPLVP RE  ++R+CKQH EG WAVVDVS+D +R +
Sbjct: 431 VISNGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGLWAVVDVSIDTIRDT 490

Query: 436 PA----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRW 491
                 V CRR PSGC++Q+MPNGYSKVTWVEH E D+  +H LY+ L+S+G  FGA+RW
Sbjct: 491 SGAPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQIHQLYRPLLSSGMGFGAQRW 550

Query: 492 VATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWT 551
           VATL RQCE LA ++++ +P+ E   I++  GR+SMLKLA+RM  +FCAGV AST H W 
Sbjct: 551 VATLQRQCECLAILISSAVPSREHSAISS-GGRRSMLKLAQRMTNNFCAGVCASTVHKWN 609

Query: 552 TL-SGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDI 610
            L +G   +DVRVMTRKSVDDPG PPGIVLSAATS WLPV P+R+FDFLRDE  RSEWDI
Sbjct: 610 KLNAGNVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDI 669

Query: 611 LSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAP 670
           LSNGG +QEMAHIA G+D  NCVSLLR + +   N++QS+MLILQE+CTD + S V+YAP
Sbjct: 670 LSNGGPMQEMAHIAKGQDHANCVSLLRASAI---NANQSSMLILQETCTDASGSLVVYAP 726

Query: 671 VDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH--GANIGEAASGGSLLTVAFQILVD 728
           VDI AM+VV+NGGD  YVALLPSGFAI+PDG+     GA+   AASGG LLTVAFQILV+
Sbjct: 727 VDIPAMHVVMNGGDSAYVALLPSGFAIVPDGSVEENGGASQQRAASGGCLLTVAFQILVN 786

Query: 729 SVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           S+PTAKL++ SV TVNNLI+CTV++IK++L CES
Sbjct: 787 SLPTAKLTVESVETVNNLISCTVQKIKSALHCES 820


>gi|224063979|ref|XP_002301331.1| predicted protein [Populus trichocarpa]
 gi|222843057|gb|EEE80604.1| predicted protein [Populus trichocarpa]
          Length = 790

 Score =  852 bits (2201), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/801 (54%), Positives = 566/801 (70%), Gaps = 50/801 (6%)

Query: 1   MPTGVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIAR 60
           MPTG +   R +  +I ++     + +S GL+L+     ++GQ     M +N   S   R
Sbjct: 1   MPTGAIAQTRLVSPSITKS-----MFNSPGLSLALQQPNIDGQGDITRMAENFETSVGRR 55

Query: 61  LREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK 118
            REEE +S +SGS+N +GASGDDQ+    P +KKRYHRHT  QIQE+EA FKECPHPD+K
Sbjct: 56  SREEEHES-RSGSDNMDGASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEK 114

Query: 119 QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNA 178
           QR ELSR L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR +N+KLRA+NM  R+A+ N 
Sbjct: 115 QRLELSRRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQDNDKLRAENMSIRDAMRNP 174

Query: 179 SCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSR 238
           SC NCGGP  IG+MS +E HLR+ENARL++E+DR+ A+A K++G+P+ +      P  + 
Sbjct: 175 SCSNCGGPAIIGDMSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLASSLSPPTNS 234

Query: 239 PLELAVGNFGAQ------------PGIGGGEMYGAADLLRSISAPT--------EADKPM 278
            LELAVG+ G              P   GG + GA  ++      T          ++ M
Sbjct: 235 SLELAVGSNGFAGLSTIATTLPLGPHFEGG-ISGALSMVTQTRLATAGVTGIDRSVERSM 293

Query: 279 IIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASR 338
            +ELA+AAM+EL++M Q  EPLW+ S +G   +LN + Y+RTF   IG KP+GF  EASR
Sbjct: 294 FLELALAAMDELVKMVQTDEPLWIGSFEGGREILNHEGYLRTFTPCIGMKPSGFVSEASR 353

Query: 339 ETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQV 398
           ET +VI+N ++LVE LMD N+W+ +F  +++R  T +V+++G+ G  NG+LQ+M AE  V
Sbjct: 354 ETGMVIINSLALVETLMDSNRWAEMFPCMIARTSTTDVIASGMGGTRNGSLQLMQAELHV 413

Query: 399 PSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR-----PSPAVRCRRRPSGCLIQEMP 453
            SPLVP RE  ++R+CKQH EG WAVVDVS+D +R     P   V CRR PSGC++Q+MP
Sbjct: 414 LSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRDTSGAPPTFVNCRRLPSGCVVQDMP 473

Query: 454 NGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTG 513
           NGYSKVTWVEH + D+R +H LY+ ++S+G  FGA+RW+ATL RQCE LA ++++N+P+ 
Sbjct: 474 NGYSKVTWVEHAQYDERQIHQLYRPVISSGMGFGAQRWIATLQRQCECLAILLSSNVPSR 533

Query: 514 EVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDP 572
           +   IT   GR+SMLKLA+RM  +FCAGV AST H W  L+    D DVRVMTRKSVDDP
Sbjct: 534 DHTAITT-SGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDP 592

Query: 573 GRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNC 632
           G PPGIVLSAATS WLPV P+R+FDFLR+E  RSEWDILSNGG +QEMAHIA G+D GNC
Sbjct: 593 GEPPGIVLSAATSVWLPVSPQRLFDFLRNERLRSEWDILSNGGPMQEMAHIAKGQDHGNC 652

Query: 633 VSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLP 692
           VSLLR + +   N++QS+MLILQE+C D   S V+YAPVD  AM+VV+NGGD  YVALLP
Sbjct: 653 VSLLRASAM---NANQSSMLILQETCIDAAGSLVVYAPVDTPAMHVVMNGGDSAYVALLP 709

Query: 693 SGFAILPDG------TSLHGA----NI-GEAASGGSLLTVAFQILVDSVPTAKLSLGSVA 741
           SGFAI+PDG       S +G     N+ G+    GSLLTVAFQILV+S+PTAKL++ SV 
Sbjct: 710 SGFAIVPDGPGSRDPPSTNGGPTANNVGGQERVSGSLLTVAFQILVNSLPTAKLTVESVE 769

Query: 742 TVNNLIACTVERIKASLSCES 762
           TVNNLI+CTV++IKA+L CES
Sbjct: 770 TVNNLISCTVQKIKAALQCES 790


>gi|177667009|gb|ACB73218.1| homeodomain protein GL2-like 1 [Gossypium hirsutum]
          Length = 772

 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/787 (55%), Positives = 554/787 (70%), Gaps = 40/787 (5%)

Query: 1   MPTGVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIAR 60
           MPTGV    R +PS+I +N     + +S GL+L+     ++ Q     + +N   S   R
Sbjct: 1   MPTGVFSQPRLVPSSIPKN-----MFNSPGLSLALQQPNIDNQGDETRLGENFEGSIGRR 55

Query: 61  LREEEFDSTKSGSENHEGASGDDQE------QRPNKKKRYHRHTQHQIQEMEAFFKECPH 114
            REEE +S +SGS+N +G SGDD +       +P +KKRYHRHT  QIQE+EA FKECPH
Sbjct: 56  SREEEHES-RSGSDNMDGGSGDDHDPTTAAGDKPPRKKRYHRHTPQQIQELEALFKECPH 114

Query: 115 PDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREA 174
           PD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRA+NM  R+A
Sbjct: 115 PDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDA 174

Query: 175 LSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPP 234
           + N  C NCGGP  IG+MS +E  LR+ENARL++E+DR+ A+A K++G+P+       PP
Sbjct: 175 MRNPICTNCGGPAIIGDMSLEEQLLRIENARLKDELDRVCALAGKFLGRPIT-----GPP 229

Query: 235 VPSRPLELAVGNFG--AQPGIGGGEMYGAADLLRSISAP-----TEADKPMIIELAVAAM 287
           +P+  LEL VG  G           +    D L ++  P     T  D+ M +ELA+AAM
Sbjct: 230 LPNSSLELGVGTNGTFGTTMATTTTLPLGHDALPTMVVPSNRPATTLDRSMFLELALAAM 289

Query: 288 EELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNH 347
           +EL++MAQ  EPLW+ +++G   +LN DEY+RTF   IG KP GF  EASRET VVI+N 
Sbjct: 290 DELVKMAQTDEPLWIKNIEGGREMLNHDEYLRTFTPCIGLKPNGFVTEASRETGVVIINS 349

Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
           ++LVE LMD N+W+ +F  +++R  T +V+S G+ G  NGALQ+M AE Q+ SPLVP RE
Sbjct: 350 LALVETLMDSNRWAEMFHCMIARTSTTDVISNGMGGTRNGALQLMNAELQILSPLVPVRE 409

Query: 408 SYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-VRCRRRPSGCLIQEMPNGYSKVTWVEHVE 466
             ++R+CKQH EG WAVVDVS+D ++ S   V CRR PSGC++Q+MPNGYSKV W EH E
Sbjct: 410 VSFLRFCKQHAEGVWAVVDVSVDTIKESTTFVTCRRLPSGCVVQDMPNGYSKVIWAEHAE 469

Query: 467 VDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS 526
            D+  VH LY+ L+S+G  FGA+RWVA L RQCE LA +M++ +PT +   IT   GR+S
Sbjct: 470 YDESQVHQLYRPLLSSGVGFGAQRWVAALQRQCECLAILMSSTVPTRDHTAIT-ASGRRS 528

Query: 527 MLKLAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGRPPGIVLSAATS 585
           MLKLA+RM  +FCAGV AST H W  L+    D DVRVMTRKS+DDPG PPGIVLSAATS
Sbjct: 529 MLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSIDDPGEPPGIVLSAATS 588

Query: 586 FWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSAN 645
            WLPV P+R+FDFLR+E  RSEWDILSNGG +QEMAHIA G+D GNCVSLLR + +   N
Sbjct: 589 VWLPVSPQRLFDFLRNERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAM---N 645

Query: 646 SSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH 705
           ++QS+MLILQE+C D   S V+YAPVDI AM+VV+NGGD  YVALLPSGFAI+PDG   H
Sbjct: 646 ANQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPRSH 705

Query: 706 GANIGEAASGGSL----------LTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIK 755
           G       +G +           LTVAFQILV+S PTAKL++ SV TVNNLI+CTV++IK
Sbjct: 706 GPISNGHVNGNTGGGSSSVGGSPLTVAFQILVNSSPTAKLTVESVETVNNLISCTVQKIK 765

Query: 756 ASLSCES 762
           A+L CES
Sbjct: 766 AALQCES 772


>gi|356568318|ref|XP_003552359.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 822

 Score =  850 bits (2196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/795 (54%), Positives = 568/795 (71%), Gaps = 44/795 (5%)

Query: 1   MPTGVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNM-MEGQLHPLDMTQNTSESEIA 59
           MP+G +   R    T+ ++     + +S GL+L+  +++  +G ++ L M +N  ++ + 
Sbjct: 39  MPSGAISLPRLATPTLAKS-----MFNSPGLSLALQSDIDGQGDMNRL-MPENFEQNGLR 92

Query: 60  RLREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           R REEE +S +SGS+N +G SGDD +    P +KKRYHRHT  QIQE+E+ FKECPHPD+
Sbjct: 93  RSREEEHES-RSGSDNMDGGSGDDFDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDE 151

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSN 177
           KQR ELSR L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRA+NM  REA+ N
Sbjct: 152 KQRLELSRRLNLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSMREAMRN 211

Query: 178 ASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNY-PLLSPPVP 236
             C NCGGP  IGE+S +E HLR+ENARL++E+DR+ A+A K++G+PV +    + PP+P
Sbjct: 212 PICSNCGGPAMIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSLTSSIGPPMP 271

Query: 237 SRPLELAVGNFG----------AQPGIGGGEMYGAADLLRSISAPTEA------------ 274
           +  LEL VG+ G            P  G G     A +  S + PT              
Sbjct: 272 NSSLELGVGSNGFGQGLSTVPSTMPDFGVGISSPLAMVSPSSTRPTTTALVTPSGFDNRS 331

Query: 275 -DKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFK 333
            ++ +++ELA+AAM+EL++MAQ GEPLW+ SL+G   +LN +EY RT    IG +P GF 
Sbjct: 332 IERSIVLELALAAMDELVKMAQTGEPLWIRSLEGGREILNHEEYTRTITPCIGLRPNGFV 391

Query: 334 CEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMT 393
            EASR+T +VI+N ++LVE LMD N+WS +F  +++R  T EV+S G+ G  NGALQ+M 
Sbjct: 392 TEASRQTGMVIINSLALVETLMDSNRWSEMFPCMIARTSTAEVISNGINGTRNGALQLMH 451

Query: 394 AEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA----VRCRRRPSGCLI 449
           AE QV SPLVP RE  ++R+CKQH EG WAVVDVS+D +R +      V CRR PSGC++
Sbjct: 452 AELQVLSPLVPVREVNFLRFCKQHAEGLWAVVDVSIDTIRETSGAPTFVNCRRLPSGCVV 511

Query: 450 QEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATN 509
           Q+MPNGYSKVTWVEH E D+  +H L++ L+S+G  FGA+RWV TL RQCE LA +M++ 
Sbjct: 512 QDMPNGYSKVTWVEHAEYDESQIHQLFRPLLSSGMGFGAQRWVTTLQRQCECLAILMSSA 571

Query: 510 IPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTL-SGTGADDVRVMTRKS 568
            P+ E   I++  GR+SMLKLA RM  +FC+GV AST H W  L +G   +DVRVMTRKS
Sbjct: 572 APSREHSAISS-GGRRSMLKLAHRMTNNFCSGVCASTVHKWNKLNAGNVGEDVRVMTRKS 630

Query: 569 VDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRD 628
           VDDPG PPGIVLSAATS WLPV  +R+FDFLRDE  RSEWDILSNGG +QEMAHIA G+D
Sbjct: 631 VDDPGEPPGIVLSAATSVWLPVSSQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQD 690

Query: 629 TGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYV 688
             NCVSLLR + +   N++QS+MLILQE+CTD + S V+YAPVDI AM+VV+NGGD  YV
Sbjct: 691 HANCVSLLRASAI---NANQSSMLILQETCTDASGSLVVYAPVDIPAMHVVMNGGDSAYV 747

Query: 689 ALLPSGFAILPDGT-SLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLI 747
           ALLPSGFAI+PDG+    G    + A+ G LLTVAFQILV+S+PTAKL++ SV TVNNLI
Sbjct: 748 ALLPSGFAIVPDGSGEEQGGASQQRAASGCLLTVAFQILVNSLPTAKLTVESVETVNNLI 807

Query: 748 ACTVERIKASLSCES 762
           +CTV++IK++L CES
Sbjct: 808 SCTVQKIKSALHCES 822


>gi|350539483|ref|NP_001234657.1| cutin deficient 2 [Solanum lycopersicum]
 gi|255529749|gb|ACU12849.1| cutin deficient 2 [Solanum lycopersicum]
          Length = 821

 Score =  850 bits (2195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/795 (55%), Positives = 563/795 (70%), Gaps = 45/795 (5%)

Query: 1   MPTGVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNT--SESEI 58
           MPTG +   R +P ++ +N     + +S GL+L+  T M EGQ     M +N   + S  
Sbjct: 39  MPTGAISQPRLLPQSLAKN-----MFNSPGLSLALQTGM-EGQSEVTRMAENYEGNNSVG 92

Query: 59  ARLREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPD 116
            R REEE DS +SGS+N EGASGD+Q+   +P +KKRYHRHT  QIQE+E+ FKECPHPD
Sbjct: 93  RRSREEEPDS-RSGSDNLEGASGDEQDATDKPPRKKRYHRHTPQQIQELESLFKECPHPD 151

Query: 117 DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALS 176
           +KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRA+NM  REA+ 
Sbjct: 152 EKQRLELSKRLSLETRQVKFWFQNRRTQMKTQLERHENSILRQENDKLRAENMSIREAMR 211

Query: 177 NASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPL-LSPPV 235
           N  C NCGGP  IGE+S +E HLR+ENARL++E+DR+ A+A K++G+P+ +    + PP+
Sbjct: 212 NPICTNCGGPAMIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLVTSMPPPM 271

Query: 236 PSRPLELAVGNFG-------------AQPGIGGG---EMYGAADLLRSISAPTEADKPMI 279
           P+  LEL VG+ G             A P  G G    +       +S       ++ M 
Sbjct: 272 PNSSLELGVGSNGFGGMSNVPTTLPLAPPDFGVGISNSLPVVPSTRQSTGIERSLERSMY 331

Query: 280 IELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRE 339
           +ELA+AAMEEL++MAQ  EPLW  S++G   +LN +EY+RTF   IG +P  F  EASRE
Sbjct: 332 LELALAAMEELVKMAQTDEPLWFRSIEGGREILNHEEYIRTFTPCIGMRPNSFISEASRE 391

Query: 340 TAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVP 399
           T +VI+N ++LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M AE QV 
Sbjct: 392 TGMVIINSLALVETLMDSNKWAEMFPCLIARTSTTDVISSGMGGTRNGALQLMHAELQVL 451

Query: 400 SPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAV----RCRRRPSGCLIQEMPNG 455
           SPLVP RE  ++R+CKQH EG WAVVDVS+D +R +         RR PSGC++Q+MPNG
Sbjct: 452 SPLVPIREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPTFPNSRRLPSGCVVQDMPNG 511

Query: 456 YSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEV 515
           YSKVTWVEH E ++   H+LY+QL+S G  FGA+RWVATL RQCE LA +M++ +   + 
Sbjct: 512 YSKVTWVEHAEYEEGANHHLYRQLISAGMGFGAQRWVATLQRQCECLAILMSSTVSARDH 571

Query: 516 GVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGR 574
             IT   GR+SMLKLA+RM  +FCAGV AST H W  L     D DVRVMTRKSVDDPG 
Sbjct: 572 TAIT-PSGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLCAGNVDEDVRVMTRKSVDDPGE 630

Query: 575 PPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVS 634
           P GIVLSAATS WLPV P+R+FDFLRDE  RSEWDILSNGG +QEMAHIA G+D GNCVS
Sbjct: 631 PAGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVS 690

Query: 635 LLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
           LLR + +   N++QS+MLIL E+C D   + V+YAPVDI AM+VV+NGG+  YVALLPSG
Sbjct: 691 LLRASAM---NANQSSMLILHETCIDAAGALVVYAPVDIPAMHVVMNGGNSAYVALLPSG 747

Query: 695 FAILPDGTSLHGANIGEAASG-------GSLLTVAFQILVDSVPTAKLSLGSVATVNNLI 747
           F+I+PDG    G+N G + +G       GSLLTVAFQILV+S+PTAKL++ SV TVNNLI
Sbjct: 748 FSIVPDGPGSRGSN-GPSCNGGPDQRISGSLLTVAFQILVNSLPTAKLTVESVETVNNLI 806

Query: 748 ACTVERIKASLSCES 762
           +CTV++IKA+L CES
Sbjct: 807 SCTVQKIKAALQCES 821


>gi|356520461|ref|XP_003528880.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 829

 Score =  844 bits (2181), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/777 (56%), Positives = 553/777 (71%), Gaps = 52/777 (6%)

Query: 27  SSSGLTLSQPTNMMEGQLHPLDMTQNTSESE-IARLREEEFDSTKSGSENHEGASGD--D 83
           +SSGL+L+     ++GQ     M +NTSE   + R RE+E +S +SGS+N +GASGD  D
Sbjct: 64  NSSGLSLALQQTNIDGQEDVNRMAENTSEPNGLRRSREDEHES-RSGSDNMDGASGDEHD 122

Query: 84  QEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRT 143
               P +KKRYHRHT  QIQE+EA FKECPHPD+KQR ELSR L LE  QVKFWFQN+RT
Sbjct: 123 AADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRT 182

Query: 144 QMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLEN 203
           QMKTQ ERHENT LR EN+KLRA+NM  R+A+ N  C NCGGP  IGE+S +E HLR+EN
Sbjct: 183 QMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPMCSNCGGPAIIGEISLEEQHLRIEN 242

Query: 204 ARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGN-FGAQPG-----IGGGE 257
           ARL++E+DR+  +A K++G+PV + P  S  +  R      GN F   P      +G   
Sbjct: 243 ARLKDELDRVCVLAGKFLGRPVSSLPSSSLELGMR------GNGFAGIPAATTLPLGQDF 296

Query: 258 MYGAA-----DLLRSISAPTEA-----------DKPMIIELAVAAMEELIRMAQMGEPLW 301
             G +     + L  +S PT A           ++ M +ELA+AAM+EL+++AQ GEPLW
Sbjct: 297 DMGMSVSMNNNALAMVSPPTSARAAAAGFDRSVERSMFLELALAAMDELVKIAQTGEPLW 356

Query: 302 MTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWS 361
           M +++G   +LN +EYVRTF   IG +P GF  EASRE  +VI+N ++LVE LMD N+W+
Sbjct: 357 MRNVEGGREILNNEEYVRTFTPCIGLRPNGFVSEASRENGMVIINSLALVETLMDSNRWA 416

Query: 362 TVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGT 421
            +F  I++R  T EV+S+G+ G  NGALQ+M AE QV SPLVP RE  ++R+CKQH EG 
Sbjct: 417 EMFPCIIARTSTTEVISSGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGV 476

Query: 422 WAVVDVSLDNLRPSPA----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYK 477
           WAVVDVS+D++R S      V CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH LY+
Sbjct: 477 WAVVDVSIDSIRESSGAPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYR 536

Query: 478 QLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVIS 537
            L+S+G  FGA+RWVATL RQCE LA +M++  P+ +   IT   GR+SM+KLA+RM  +
Sbjct: 537 PLLSSGMGFGAQRWVATLQRQCECLAILMSSAAPSRDHSAIT-AGGRRSMMKLAQRMTNN 595

Query: 538 FCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVF 596
           FCAGV AST H W  L+    D DVRVMTRKSVDDPG PPGIVLSAATS WLPV P R+F
Sbjct: 596 FCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPHRLF 655

Query: 597 DFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQE 656
           DFLRDE  RSEWDILSNGG +QEMAHIA G+D GN VSLLR + +   NS+QS+MLILQE
Sbjct: 656 DFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNAVSLLRASAI---NSNQSSMLILQE 712

Query: 657 SCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG-----------TSLH 705
           +C D   S V+YAPVDI AM+VV+NGGD  YVALLPSGFAI+PDG           ++ +
Sbjct: 713 TCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGPPNGPTSTTN 772

Query: 706 GANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           G + G     GSLLTVAFQILV+S+PTAKL++ SV TVNNLI+CTV++IKA+L CES
Sbjct: 773 GGDNGVTRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES 829


>gi|302398853|gb|ADL36721.1| HD domain class transcription factor [Malus x domestica]
          Length = 824

 Score =  841 bits (2173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/780 (55%), Positives = 552/780 (70%), Gaps = 52/780 (6%)

Query: 27  SSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQE- 85
           +S GL+L+  TN+ +GQ     + ++   +   R   EE   ++SGS+N +GASGDDQ+ 
Sbjct: 53  NSPGLSLALQTNV-DGQGDVTRVAESYEANNGGRRSREEEHESRSGSDNMDGASGDDQDA 111

Query: 86  --QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRT 143
               P KKKRYHRHT  QIQE+EA FKECPHPD+KQR ELSR L LE  QVKFWFQN+RT
Sbjct: 112 ADNNPRKKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLNLETRQVKFWFQNRRT 171

Query: 144 QMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLEN 203
           QMKTQ ERHEN+ LR EN+KLRA+NM  R+A+ N  C NCGGP  IG++S DE HLR+EN
Sbjct: 172 QMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICSNCGGPAIIGDISLDEQHLRIEN 231

Query: 204 ARLREEIDRISAIAAKYVGKPVVNYPL-LSPPVPSRPLELAVGN--FGAQ---------- 250
           ARL++E+DR+ A+A K++G+P+ +    + PP+PS  LEL VG+  FG            
Sbjct: 232 ARLKDELDRVCALAGKFLGRPISSLATSMGPPLPSSTLELGVGSNGFGGMSNVATSISMG 291

Query: 251 PGIGGGEMYGAADLLRSISAPT------EADKPMIIELAVAAMEELIRMAQMGEPLWMTS 304
           P  GGG   G+A  + S   P+        ++ M +ELA+AAM+EL++MAQ  EPLW+ S
Sbjct: 292 PDFGGG--IGSAMSIVSHGRPSVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWLRS 349

Query: 305 LDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVF 364
           L+G   VLN +EY+R+F   IG KP+GF  EASRE+ +VI+N ++LVE LMD N+W  +F
Sbjct: 350 LEGGREVLNHEEYMRSFTPCIGLKPSGFVSEASRESGMVIINSLTLVETLMDSNRWLEMF 409

Query: 365 SGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAV 424
            G+++R  T +V+S+G+ G  NGALQ+M AE QV SPLVP RE  ++R+CKQ  EG WAV
Sbjct: 410 PGVIARTSTTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQLAEGVWAV 469

Query: 425 VDVSLDNLRPSPA----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLV 480
           VDVS+D +R +      + CRR PSGC++Q+MPNGYS+VTWVEH E D+  VH LY+ L+
Sbjct: 470 VDVSVDVIRDTSGAPTFMNCRRLPSGCVVQDMPNGYSRVTWVEHAEYDESQVHQLYRPLL 529

Query: 481 STGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCA 540
           S+G  FGA+RWVATL RQ E  A +M++++P+ +   IT   GR+SMLKLA+RM  +FCA
Sbjct: 530 SSGMGFGAQRWVATLQRQSEFQAILMSSSVPSRDHTAIT-ASGRRSMLKLAQRMTDNFCA 588

Query: 541 GVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFL 599
           GV AST H WT L+    D DVRVMTR+S+DDPG PPG+VLSAATS WLPV P+R+FDFL
Sbjct: 589 GVCASTVHKWTKLNAGNVDEDVRVMTRESLDDPGEPPGVVLSAATSVWLPVSPQRLFDFL 648

Query: 600 RDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCT 659
           RDE  RSEWDILSNGG +QEMAHIA G+D GNCVSLLR      AN++Q +MLILQE+  
Sbjct: 649 RDERLRSEWDILSNGGPMQEMAHIAKGQDPGNCVSLLRAR----ANANQGSMLILQETRI 704

Query: 660 DPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAAS----- 714
           D   S V+YAPVDI AM+VV+NGGD  YVALLPSGFAI+PDG    G   G+ A+     
Sbjct: 705 DAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGPMSGKGATHGSSN 764

Query: 715 ------------GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
                        GSLLT+ FQILV+S+P  KL++ SV TVN+LI+CTV++IKASL CES
Sbjct: 765 GGGCGDDGGNRVSGSLLTMTFQILVNSLPAGKLTVESVETVNHLISCTVQKIKASLHCES 824


>gi|19070143|gb|AAL83725.1|AF328842_1 homeodomain protein HB2 [Picea abies]
          Length = 708

 Score =  840 bits (2170), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/707 (58%), Positives = 525/707 (74%), Gaps = 29/707 (4%)

Query: 77  EGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 134
           +G SGDDQ+    P +KKRYHRHT  QIQE+EA FKECPHPD+KQR ++S+ L LE  QV
Sbjct: 11  DGGSGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLDISKRLNLETRQV 70

Query: 135 KFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSF 194
           K WFQN+RTQMKTQ ERHEN+ LR ENEKLR++N+  R+A+ N  C NCGGP  +GEMSF
Sbjct: 71  KLWFQNRRTQMKTQLERHENSILRQENEKLRSENLSIRDAMRNPICTNCGGPAVLGEMSF 130

Query: 195 DEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIG 254
           +E  LR+ENARL++E+DR+ A+A K+ G+PV + P + P +P   L+L VG      G+ 
Sbjct: 131 EEQQLRIENARLKKELDRLCALAGKFFGRPVPSMPSV-PLMPKSSLDLGVG------GMP 183

Query: 255 GGEMYGAADLLRSISAPTEA-----DKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTA 309
                G ADL+   +          ++ M+ ELA+A+M+EL +MAQ  E LW+ +LD   
Sbjct: 184 TSLPSGCADLMHGPAGGRTGNIIGIERSMLAELALASMDELFKMAQADETLWIPNLDAGK 243

Query: 310 AVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVS 369
             LN +EY+R FP  I PK  G   EA+RET +VI N ++LVE LMDV++W  +F  ++S
Sbjct: 244 ETLNYEEYMRQFPSTITPKLIGLATEATRETGMVITNSLNLVETLMDVDRWKEMFPCMIS 303

Query: 370 RAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL 429
           RA  ++V+S+G++G  NGALQ+M AE QV SPLVP RE Y++R+CKQH EG WAVVDVS+
Sbjct: 304 RAAMVDVISSGMSGTRNGALQLMYAELQVLSPLVPAREVYFLRFCKQHAEGVWAVVDVSV 363

Query: 430 DNLR---PSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAF 486
           D+LR   P+  ++CRR PSGCLIQ+MPNGYSKVTWVEH E DDRGVH LY+ L+++G AF
Sbjct: 364 DSLRDNSPAGFMKCRRLPSGCLIQDMPNGYSKVTWVEHAEYDDRGVHRLYRSLLNSGMAF 423

Query: 487 GAKRWVATLDRQCERLASVMAT-NIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSAS 545
           GA+RW+ATL RQCE LA +MAT N+   +   I   +GR+SML+LA+RM  +FCAGVSAS
Sbjct: 424 GAQRWLATLQRQCECLAILMATANVTARDPTAIRTPNGRRSMLRLAQRMTDNFCAGVSAS 483

Query: 546 TAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
           T HTW  LSG   DDVRVMTRKSVDDPG PPG+VLSAATS WLPV P+R+FDFLRDE  R
Sbjct: 484 TVHTWNKLSGNIDDDVRVMTRKSVDDPGEPPGVVLSAATSVWLPVSPQRLFDFLRDERLR 543

Query: 606 SEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASF 665
           SEWDILSNGG +QEMAHI  G+D GNCVSLL+ + + S  S  S+MLILQ++CT+ + S 
Sbjct: 544 SEWDILSNGGPMQEMAHIPKGQDPGNCVSLLKASAMNSNQS--SSMLILQKTCTNASGSL 601

Query: 666 VIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG---------TSLHGANIGEAASGG 716
           V+YAPVDI AM+VV++GGDP YVALLPSGFAILP+G          S +G  +     GG
Sbjct: 602 VVYAPVDIPAMHVVMSGGDPPYVALLPSGFAILPNGPKCRPLALNPSGNGVGVNSPRVGG 661

Query: 717 SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
           SLLTVAFQILV+S+PTAKL++ SV TVNNLI+CTV++IKA+L CE A
Sbjct: 662 SLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCEDA 708


>gi|356505007|ref|XP_003521284.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 835

 Score =  830 bits (2144), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/783 (55%), Positives = 548/783 (69%), Gaps = 62/783 (7%)

Query: 27  SSSGLTLSQPTNMMEGQLHPLDMTQNTSESE-IARLREEEFDSTKSGSENHEGASGD--D 83
           +S GL+L+  T++ +GQ     M +N+ E   + R RE+E +S +SGS+N +G SGD  D
Sbjct: 68  NSPGLSLALQTSI-DGQEDVNRMAENSFEPNGLRRSREDEHES-RSGSDNMDGGSGDEHD 125

Query: 84  QEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRT 143
               P +KKRYHRHT  QIQE+EA FKECPHPD+KQR ELSR L LE  QVKFWFQN+RT
Sbjct: 126 AADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRT 185

Query: 144 QMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLEN 203
           QMKTQ ERHENT LR EN+KLRA+NM  R+A+ N  C NCGG   IGE+S +E HLR+EN
Sbjct: 186 QMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPMCSNCGGLAIIGEISLEEQHLRIEN 245

Query: 204 ARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFG-----------AQPG 252
           ARL++E+DR+ A+A K++G+PV + P          LEL +G  G           AQ  
Sbjct: 246 ARLKDELDRVCALAGKFLGRPVSSLP---------SLELGMGGNGFAGMPAATLPLAQDF 296

Query: 253 IGGGEMYGAADLLRSISAPT-----------EADKPMIIELAVAAMEELIRMAQMGEPLW 301
             G  +    + L  +S PT             ++ M +ELA+AAM+EL++MAQ GEPLW
Sbjct: 297 AMGMSVSMNNNALAMVSPPTSTRPAAAGFDRSVERSMFLELALAAMDELVKMAQTGEPLW 356

Query: 302 MTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWS 361
           M +++G   +LN +EYVR F   IG +P GF  EASRE  +VI+N ++LVE LMD N+W+
Sbjct: 357 MRNVEGGREILNHEEYVRNFTPSIGLRPNGFVSEASRENGMVIINSLALVETLMDSNRWA 416

Query: 362 TVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGT 421
            +F  I++R  T EV+S+G+ G  NGALQ+M AE QV SPLVP RE  ++R+CKQH EG 
Sbjct: 417 EMFPCIIARTSTTEVISSGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGL 476

Query: 422 WAVVDVSLDNLRPSPA----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYK 477
           WAVVDVS+D++R S      V  RR PSGC++Q+MPNGYSKVTWVEH E ++  VH LY+
Sbjct: 477 WAVVDVSIDSIRESSGAPTFVNGRRLPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQLYR 536

Query: 478 QLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVIS 537
            L+S+G  FGA+RWVATL RQCE LA +M++  P+ +   IT   GR+SM+KLA+RM  +
Sbjct: 537 PLLSSGMGFGAQRWVATLQRQCECLAILMSSAAPSRDHSAIT-AGGRRSMVKLAQRMTNN 595

Query: 538 FCAGVSASTAHTWTTLSGTGA--DDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRV 595
           FCAGV AST H W  L+      +DVRVMTRKSVDDPG PPGIVLSAATS WLPV P R+
Sbjct: 596 FCAGVCASTVHKWNKLNAAANVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPHRL 655

Query: 596 FDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQ 655
           FDFLRDE  RSEWDILSNGG +QEMAHIA G+D GN VSLLR + +   NS+QS+MLILQ
Sbjct: 656 FDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNAVSLLRASAI---NSNQSSMLILQ 712

Query: 656 ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG-------------- 701
           E+C D   S V+YAPVDI AM+VV+NGGD  YVALLPSGFAI+PDG              
Sbjct: 713 ETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGPHQNGPTSS 772

Query: 702 --TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
             T+ +G + G     GSLLTVAFQILV+S+PTAKL++ SV TVNNLI+CTV++IKA+L 
Sbjct: 773 TTTTTNGGDNGVTRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALH 832

Query: 760 CES 762
           CES
Sbjct: 833 CES 835


>gi|302787511|ref|XP_002975525.1| hypothetical protein SELMODRAFT_450555 [Selaginella moellendorffii]
 gi|300156526|gb|EFJ23154.1| hypothetical protein SELMODRAFT_450555 [Selaginella moellendorffii]
          Length = 675

 Score =  826 bits (2134), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/714 (59%), Positives = 523/714 (73%), Gaps = 68/714 (9%)

Query: 77  EGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 134
           EGAS +DQE   +P +K+R+HRHT  QIQEME  FKECPHPD+KQR +LSRELGLEP QV
Sbjct: 2   EGASSEDQEPSDQPPRKRRFHRHTLRQIQEMEMVFKECPHPDEKQRMQLSRELGLEPRQV 61

Query: 135 KFWFQNKRTQMKT----------QHERHENTQLRTENEKLRADNMRYREALSNASCPNCG 184
           KFWFQN+RTQMK             ER EN+ LR ENE+LR++N+  REAL NA+CP+CG
Sbjct: 62  KFWFQNRRTQMKVSIKVFEENQAHQERAENSMLRAENERLRSENIAMREALKNATCPHCG 121

Query: 185 GPTAIGEMSFDEHHLRLENARLREEI--DRISAIAAKYVGKPVVNYPLLSPPVPSRPLEL 242
           GP  +GEMS+DE  LR+ENA L++E+  DR+S++AAKY+ KP  +  L   P PS  LEL
Sbjct: 122 GPATLGEMSYDEQQLRIENAHLKDEVQLDRVSSLAAKYLSKPPSSSALAVTPGPSM-LEL 180

Query: 243 AVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWM 302
           A      +PG                   ++ +KP++ ELA+ AMEEL+ +AQ  EPLW+
Sbjct: 181 AT-----RPG-----------------GLSQVEKPLVAELAIIAMEELLALAQSREPLWI 218

Query: 303 TSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWST 362
              +G    LN +EY++ F RG+GP P G K E +R+T +V+MN  +LV+ +MD  +W  
Sbjct: 219 LEENGAKESLNGEEYMQQFSRGLGPTPVGLKSEVTRDTGLVMMNGAALVDTIMDA-RWMD 277

Query: 363 VFSGIVSRAMTLEVLSTGVAGNYNGALQ-VMTAEFQVPSPLVPTRESYYVRYCKQHGEGT 421
           +FS I+SRA+T EVLSTGV GN+N ALQ VM AEFQV SPLVPTRE+Y++RYCKQH EG 
Sbjct: 278 MFSCIISRALTSEVLSTGVGGNWNNALQLVMYAEFQVLSPLVPTREAYFLRYCKQHAEGV 337

Query: 422 WAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKV---TWVEHVEVDDRGVHNLYKQ 478
           WA+VDVS+D              SG LIQ+MPNGYSKV   T ++H+E DDR V+N+Y+ 
Sbjct: 338 WAIVDVSVDG-------------SGFLIQDMPNGYSKVSQVTILQHMEYDDRQVNNMYRG 384

Query: 479 LVSTGNAFGAKRWVATLDRQCERLASVMATNI-PTGEVGVITNQDGRKSMLKLAERMVIS 537
           LVS+G AFGAKRW+ATL RQCERLA ++ATNI P    GVI+N  GR+SMLKLA+RM  +
Sbjct: 385 LVSSGLAFGAKRWLATLQRQCERLAVLLATNISPRDLGGVISNATGRRSMLKLAQRMTNN 444

Query: 538 FCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFD 597
           FCAGVSAST HTWTTLSG+G DDVRVMTRKS+D+PG PPGIVLSAATS W+PV P+RVF+
Sbjct: 445 FCAGVSASTVHTWTTLSGSGEDDVRVMTRKSIDNPGEPPGIVLSAATSLWMPVSPQRVFE 504

Query: 598 FLRDENTRSE----WDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLI 653
           FLRD+  RSE    WDILSNGG VQEMAHIA G D GN +SLLRVN L   N+SQSNMLI
Sbjct: 505 FLRDDRLRSEMNSQWDILSNGGSVQEMAHIAKGHDPGNVISLLRVNAL---NTSQSNMLI 561

Query: 654 LQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGA---NIG 710
           LQES TD + S ++YAPVDI AMN+V+ GGDP YVALLPSGFAILP+G    G       
Sbjct: 562 LQESSTDESGSLIVYAPVDIPAMNLVMQGGDPAYVALLPSGFAILPEGPRSIGTTPETSS 621

Query: 711 EAASG--GSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
            A+SG  G LLTVAFQILV +VPTAKL+L SV TVN+LI+CTV+RIK +LSCE+
Sbjct: 622 RASSGEPGCLLTVAFQILVSNVPTAKLNLESVTTVNSLISCTVQRIKTALSCET 675


>gi|449530169|ref|XP_004172068.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like, partial [Cucumis sativus]
          Length = 468

 Score =  821 bits (2120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/469 (84%), Positives = 428/469 (91%), Gaps = 12/469 (2%)

Query: 1   MPTGVMIPARNMPSTIGRNGN--VGGLGSSSGLTLSQ------PTNMMEGQLHPLDMTQN 52
           MP G+M PARNM S IGRNGN  V G  S SGL  SQ        ++M+  L PLD+ QN
Sbjct: 1   MPAGIMTPARNMGSMIGRNGNNDVAGFSSPSGLPFSQICRKMFQPSIMDAHLLPLDIPQN 60

Query: 53  TSESEIARLREEEFDS-TKSGSEN-HEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFK 110
           TSES++AR+R+++FDS TKSGS+N HE  SGDDQ+ RP KKKRYHRHTQHQIQEMEAFFK
Sbjct: 61  TSESDLARIRDDDFDSATKSGSDNNHELVSGDDQDPRP-KKKRYHRHTQHQIQEMEAFFK 119

Query: 111 ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMR 170
           ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK QHERHENTQLRTENEKLRADNMR
Sbjct: 120 ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENTQLRTENEKLRADNMR 179

Query: 171 YREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPL 230
           YREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPL
Sbjct: 180 YREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPL 239

Query: 231 LSPPVPSRPLELAVGNFGAQPGIGGGEMYGAA-DLLRSISAPTEADKPMIIELAVAAMEE 289
           LSP VPSRPLEL + NFG QPG+GGG++YG+A DL+RSISAPTEADKPMIIELAVAAMEE
Sbjct: 240 LSPSVPSRPLELGMANFGPQPGLGGGDIYGSASDLIRSISAPTEADKPMIIELAVAAMEE 299

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHIS 349
           L RMAQMGEPLWMT+LDG+  +LNEDEY+RTFPRGIGPKP+GFKCEASRE+AVVIMNHI+
Sbjct: 300 LTRMAQMGEPLWMTTLDGSTHMLNEDEYLRTFPRGIGPKPSGFKCEASRESAVVIMNHIN 359

Query: 350 LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESY 409
           LVEILMDVNQWST+FSGIVSRAMTLEVLSTGVAGNYNGALQVMT+EFQVPSPLVPTRESY
Sbjct: 360 LVEILMDVNQWSTLFSGIVSRAMTLEVLSTGVAGNYNGALQVMTSEFQVPSPLVPTRESY 419

Query: 410 YVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSK 458
           YVRYCKQHG+GTW VVDVSLD+LRP+P VRCRRRPSGCLIQEMPNGYSK
Sbjct: 420 YVRYCKQHGDGTWVVVDVSLDDLRPTPGVRCRRRPSGCLIQEMPNGYSK 468


>gi|357507075|ref|XP_003623826.1| Homeodomain protein (HB2) [Medicago truncatula]
 gi|355498841|gb|AES80044.1| Homeodomain protein (HB2) [Medicago truncatula]
          Length = 778

 Score =  818 bits (2112), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/776 (54%), Positives = 542/776 (69%), Gaps = 49/776 (6%)

Query: 22  VGGLGSSSGLTLSQPTNM--MEGQLHPLDMTQN---TSESEIARLREEEFDSTKSGSENH 76
           V  + +SSGL+L+  TN+    G +  L M +N   T+        EEE +S +SGS+N 
Sbjct: 17  VKSMFNSSGLSLALQTNLEAQGGDMKRL-MAENFHQTNNGLRRNREEEEHESCRSGSDNM 75

Query: 77  EGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 134
           +G SGDD +    P +KKRYHRHT  QIQE+E+ FKECPHPD+KQR ELS+ L LE  QV
Sbjct: 76  DGISGDDFDAADNPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCLETRQV 135

Query: 135 KFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSF 194
           KFWFQN+RTQMKTQ ERHEN+ LR  N+KLRA+NM  REA+ N  C NCGGP  I E+S 
Sbjct: 136 KFWFQNRRTQMKTQLERHENSLLRQANDKLRAENMSIREAMRNPMCSNCGGPAIISEISL 195

Query: 195 DEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIG 254
           +E HLR+ENARL++E+DR+  +A K++G+P+ + P  S         L +G  G    + 
Sbjct: 196 EEQHLRIENARLKDELDRVCTLAGKFLGRPITSLPNSS---------LEIGFVGLNNTLP 246

Query: 255 GGEMYGAADLLRSISAPT------------------EADKPMIIELAVAAMEELIRMAQM 296
                G    + S+S P+                    ++ M +ELA+AAM+EL++MAQ 
Sbjct: 247 STMPLGQDFGMVSMSPPSITRGTSMVTNTNSNGFDRSMERSMFLELALAAMDELVKMAQT 306

Query: 297 GEPLWMTSLDGTAAVLNEDEYVRTFPR-GIGPKPTGFKCEASRETAVVIMNHISLVEILM 355
            EPLW+ S++    + N +EY R      IG KP GF  EASRE+ VVI+N ++LVE LM
Sbjct: 307 NEPLWIRSVESGKEIFNHEEYTRIISTPCIGLKPNGFVSEASRESGVVIINSLALVETLM 366

Query: 356 DVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCK 415
           D N+WS +F  +++R+ T EV+S+G+ G  NGALQ+M AE QV SPLVP RE  ++R+CK
Sbjct: 367 DSNRWSEMFPCVIARSSTTEVISSGINGTRNGALQLMQAELQVLSPLVPVREVSFLRFCK 426

Query: 416 QHGEGTWAVVDVSLDNLRPSPA-----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR 470
           QH EG WAVVDVS+D +R + A     + CRR PSGC++Q+MPNGYSKVTWVEH E ++ 
Sbjct: 427 QHAEGVWAVVDVSIDTIRETSAGAPTFLTCRRLPSGCVVQDMPNGYSKVTWVEHAEYEES 486

Query: 471 GVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKL 530
            VH LY+ L+S G  FGA+RWVATL RQCE LA +M++++P+ E   I+   GR+SMLKL
Sbjct: 487 QVHQLYRPLLSLGMGFGAQRWVATLQRQCECLAILMSSSLPSREHSAIS-AGGRRSMLKL 545

Query: 531 AERMVISFCAGVSASTAHTWTTL-SGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP 589
           A RM  +FCAGV AST H W  L +G   +DVRVMTRKSVDDPG PPGIVLSAATS WLP
Sbjct: 546 AHRMTNNFCAGVCASTVHKWNKLNAGNVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLP 605

Query: 590 VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQS 649
             P++VFDFLR+E  RSEWDILSNGG +QEMAHIA G D GNCVSLLR + +   NSSQS
Sbjct: 606 ASPQKVFDFLRNEKLRSEWDILSNGGPMQEMAHIAKGHDHGNCVSLLRASAI---NSSQS 662

Query: 650 NMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANI 709
           +MLILQE+ TD + S V+YAPVDI AM+VV+NGGD  YVALLPSGFA+LPDG S    N 
Sbjct: 663 SMLILQETSTDASGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAVLPDGHSNGSGNH 722

Query: 710 GEAAS---GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
            +A+     GSLLTVAFQILV+S+PTAKL++ SV TVNNLI+CT+++IK +L CES
Sbjct: 723 EDASQPRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTIQKIKVALQCES 778


>gi|302807022|ref|XP_002985242.1| hypothetical protein SELMODRAFT_234698 [Selaginella moellendorffii]
 gi|300147070|gb|EFJ13736.1| hypothetical protein SELMODRAFT_234698 [Selaginella moellendorffii]
          Length = 695

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/708 (56%), Positives = 511/708 (72%), Gaps = 39/708 (5%)

Query: 77  EGASGDDQEQRPN---KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
           EGASGDD E + +    KKRYHRHT  Q +++E FFKECPHPD+KQR+EL RELGLEP Q
Sbjct: 2   EGASGDDFEDQSDLQASKKRYHRHTVQQTRQLEMFFKECPHPDEKQRQELGRELGLEPRQ 61

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMS 193
           VKFWFQN+RTQMK  HER +N+ LR ENE LR +N+  REAL +ASCP CGG    GEMS
Sbjct: 62  VKFWFQNRRTQMKAHHERADNSILRAENENLRTENIALREALKDASCPKCGGQLTPGEMS 121

Query: 194 FDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGI 253
           F E  LR+ENARLR+E++R+SA+ AKY+ +  +   +L    P  P ++           
Sbjct: 122 FTEQQLRIENARLRDELNRVSALVAKYITRSAIPLNIL----PDFPFDIT--------AT 169

Query: 254 GGGEMYGAADLLRSISAP---TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAA 310
           G  +      +L   S P   TE++KP+I ELA+ AMEEL+ +A   +    +S+DGT  
Sbjct: 170 GTSDSVAVPSILEVASRPGGVTESEKPVIAELAIVAMEELLLVAAETDGALWSSVDGTKE 229

Query: 311 VLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSR 370
           VL+++EY R FPRG+GP+  G + EASRET +V+MN   L++ +M+V +W  +FS IVSR
Sbjct: 230 VLSQEEYFRQFPRGLGPRLMGMETEASRETGLVMMNAAGLIDTIMNVGRWVDMFSNIVSR 289

Query: 371 AMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLD 430
           A T +VL+TGV GN+N ALQ++ AE Q+ SPLVPTRE +++RYCKQH E  WA+VDVS+D
Sbjct: 290 AFTTQVLTTGVGGNWNNALQLLYAELQILSPLVPTREFFFLRYCKQHSERVWAIVDVSID 349

Query: 431 NLR--PSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGA 488
            LR  P+P +RCR RPSG  I+++ NGYSKVT V+H+E D R   N+Y  L+ +G AFGA
Sbjct: 350 GLRDNPAPQLRCRMRPSGFFIEDLQNGYSKVTAVQHIEADHRQTENIYHGLMCSGAAFGA 409

Query: 489 KRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAH 548
           KRW+A L RQCERL  ++  NI   ++GVI N +GR+SML LA+RM  ++CAGVSAS  H
Sbjct: 410 KRWLAILQRQCERLGIMLTNNISARDLGVIPNANGRRSMLFLAQRMTSNYCAGVSASIVH 469

Query: 549 TWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
           TWTTLSG G +D+RVMTRKSV++PG PPGIVLSAATS W+PV  +R+F+FLRDE  RSEW
Sbjct: 470 TWTTLSGAGEEDIRVMTRKSVNNPGEPPGIVLSAATSLWVPVNSQRLFEFLRDERLRSEW 529

Query: 609 DILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIY 668
           DILSNGG VQE+A +A G+D G  VSLLRV  L   N+SQSNMLILQESCTD + S ++Y
Sbjct: 530 DILSNGGAVQEIARVATGQDPGCVVSLLRVGAL---NTSQSNMLILQESCTDASGSLIVY 586

Query: 669 APVDIVAMNVVLNGGDPDYVALLPSGFAILPDGT-------------SLHGANIGEA--- 712
           APVDI AMN+V+ GGDP  VALLPSGFAI PDG                 GA++ EA   
Sbjct: 587 APVDIPAMNLVMQGGDPATVALLPSGFAISPDGAVSQRTTQEGGGAGGGGGADLAEASSS 646

Query: 713 ASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
           +S G+LLTVAFQILV +VPTAKL+L SVATVN+LI+ TV+RIK +L C
Sbjct: 647 SSSGALLTVAFQILVSNVPTAKLNLESVATVNSLISSTVQRIKTALGC 694


>gi|302773265|ref|XP_002970050.1| hypothetical protein SELMODRAFT_450564 [Selaginella moellendorffii]
 gi|300162561|gb|EFJ29174.1| hypothetical protein SELMODRAFT_450564 [Selaginella moellendorffii]
          Length = 683

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/697 (57%), Positives = 508/697 (72%), Gaps = 29/697 (4%)

Query: 77  EGASGDDQEQRPN---KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
           EGASGDD E + +    KKRYHRHT  Q +++E  FKECPHPD+KQR+EL RELGLEP Q
Sbjct: 2   EGASGDDFEDQSDLQASKKRYHRHTVQQTRQLE-MFKECPHPDEKQRQELGRELGLEPRQ 60

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMS 193
           VKFWFQN+RTQMK  HER +N+ LR ENE LR +N+  REAL +ASCP CGG    GEMS
Sbjct: 61  VKFWFQNRRTQMKAHHERADNSILRAENENLRTENIALREALKDASCPKCGGQLTPGEMS 120

Query: 194 FDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGI 253
           F E  LR+ENARLR+E++R+SA+ AKY+ +  +   +L    P  P ++           
Sbjct: 121 FTEQQLRIENARLRDELNRVSALVAKYITRSAIPLNIL----PDFPFDIT--------AT 168

Query: 254 GGGEMYGAADLLRSISAP---TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAA 310
           G  +      +L   S P   TE++KP+I ELA+ AMEEL+ +A   +    +S+DGT  
Sbjct: 169 GTSDSVAVPSILEMASRPGGVTESEKPVIAELAIVAMEELLLVAAETDGALWSSVDGTKE 228

Query: 311 VLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSR 370
           VL+++EY R FPRG+GP+  G + EASRET +V+MN   L++ +M+V +W  +FS IVSR
Sbjct: 229 VLSQEEYFRQFPRGLGPRLMGMETEASRETGLVMMNAAGLIDTIMNVGRWVDMFSNIVSR 288

Query: 371 AMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLD 430
           A T +VL+TGV GN+N ALQ++ AE Q+ SPLVPTRE +++RYCKQH E  WA+VDVS+D
Sbjct: 289 AFTTQVLTTGVGGNWNNALQLLYAELQILSPLVPTREFFFLRYCKQHSERVWAIVDVSID 348

Query: 431 NLR--PSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGA 488
            LR  P+P +RCR RPSG  I+++ NGYSKVT V+H+E D R   N+Y  LV +G AFGA
Sbjct: 349 GLRDNPAPQLRCRMRPSGFFIEDLQNGYSKVTAVQHIEADHRQTENIYHGLVCSGAAFGA 408

Query: 489 KRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAH 548
           KRW+A L RQCERL  ++  NI   ++GVI N +GR+SML LA+RM  ++CAGVSAS  H
Sbjct: 409 KRWLAILQRQCERLGIMLTNNISARDLGVIPNANGRRSMLFLAQRMTSNYCAGVSASIVH 468

Query: 549 TWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
           TWTTLSG G +D+RVMTRKSV++PG PPGIVLSAATS W+PV  +R+F+FLRDE  RSEW
Sbjct: 469 TWTTLSGAGEEDIRVMTRKSVNNPGEPPGIVLSAATSLWVPVNSQRLFEFLRDERLRSEW 528

Query: 609 DILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIY 668
           DILSNGG VQE+A +A G+D G  VSLLRV  L   N+SQSNMLILQESCTD + S ++Y
Sbjct: 529 DILSNGGAVQEIARVATGQDPGCVVSLLRVGAL---NTSQSNMLILQESCTDASGSLIVY 585

Query: 669 APVDIVAMNVVLNGGDPDYVALLPSGFAILPDG-----TSLHGANIGEAASGGSLLTVAF 723
           APVDI AMN+V+ GGDP  VALLPSGFAI PDG     T+  G     ++S G+LLTVAF
Sbjct: 586 APVDIPAMNLVMQGGDPATVALLPSGFAISPDGAVSQRTTQEGGEASSSSSSGALLTVAF 645

Query: 724 QILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
           QILV +VPTAKL+L SVATVN+LI+ TV+RIK +L C
Sbjct: 646 QILVSNVPTAKLNLESVATVNSLISSTVQRIKTALGC 682


>gi|356535894|ref|XP_003536477.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 751

 Score =  793 bits (2049), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/758 (54%), Positives = 542/758 (71%), Gaps = 49/758 (6%)

Query: 40  MEGQLHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPN---KKKRYHR 96
           MEG      + +N     + R+R++E++S +SGS+N EGASGDDQ+   +   +KKRYHR
Sbjct: 1   MEGPSEIGLIGENFDAGLMGRMRDDEYES-RSGSDNFEGASGDDQDGGDDQPQRKKRYHR 59

Query: 97  HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQ 156
           HT HQIQE+EAFFKECPHPD+KQR +LS+ L LE  QVKFWFQN+RTQMKTQ ERHEN  
Sbjct: 60  HTPHQIQELEAFFKECPHPDEKQRLDLSKRLALENKQVKFWFQNRRTQMKTQLERHENIM 119

Query: 157 LRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAI 216
           LR EN+KLRA+N   ++A+SN  C NCGGP   G++SF+EH +R+ENARL++E++RI A+
Sbjct: 120 LRQENDKLRAENSLMKDAMSNPVCNNCGGPAIPGQISFEEHQIRIENARLKDELNRICAL 179

Query: 217 AAKYVGKPV--VNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYG-----AADL----- 264
           A K++GKP+  +  P ++ P  +  LEL +G    + GIGG    G       DL     
Sbjct: 180 ANKFLGKPISSLTNP-MALPTSNSGLELGIG----RNGIGGSSTLGTPLPMGLDLGDGVL 234

Query: 265 ------------LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVL 312
                       L  +    + ++ M+I+LA+AAMEEL++M Q   PLW+ SLDG   + 
Sbjct: 235 GTQPAMPGIRPALGLMGNEVQLERSMLIDLALAAMEELLKMTQAESPLWIKSLDGEKEMF 294

Query: 313 NEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAM 372
           N +EY R F   IGPKPTG+  EA+RET +VI+N ++LVE LMD N+W+ +F  +++RA+
Sbjct: 295 NHEEYARLFSPCIGPKPTGYITEATRETGIVIINSLALVETLMDANRWAEMFPSMIARAI 354

Query: 373 TLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL--- 429
            L+V+S G+ G  NGALQVM AE Q+ SPLVP R+  ++R+CKQH EG WAVVDVS+   
Sbjct: 355 NLDVISNGMGGTRNGALQVMHAEVQLLSPLVPVRQVRFIRFCKQHAEGVWAVVDVSIEIG 414

Query: 430 -DNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGA 488
            D     P + CRR PSGC++Q+MPNGYSKVTW+EH E D+  VH LY+ L+S+G  FGA
Sbjct: 415 HDAANAQPVMSCRRLPSGCIVQDMPNGYSKVTWLEHWEYDENVVHQLYRPLLSSGVGFGA 474

Query: 489 KRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAH 548
            RW+ATL RQCE LA +M+++I + +   ++ Q GR+SMLKLA+RM  +FC+GV AS+A 
Sbjct: 475 HRWIATLQRQCECLAILMSSSISSDDHTALS-QAGRRSMLKLAQRMTSNFCSGVCASSAR 533

Query: 549 TWTTLS-GTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSE 607
            W +L  GT  DD++VMTRK+VDDPG PPGIVLSAATS W+PV  +R+FDFLRDE  RSE
Sbjct: 534 KWDSLHIGTLGDDMKVMTRKNVDDPGEPPGIVLSAATSVWVPVSRQRLFDFLRDERLRSE 593

Query: 608 WDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVI 667
           WDILSNGG +QEM HIA G+  GNCVSLLR N   + N++ S+MLILQE+  D + S V+
Sbjct: 594 WDILSNGGPMQEMVHIAKGQGHGNCVSLLRAN---AVNANDSSMLILQETWMDASCSVVV 650

Query: 668 YAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG-TSLHGAN------IGEAASGGSLLT 720
           YAPVD+ ++NVV++GGD  YVALLPSGFAILPDG  + +G N       G    GGSLLT
Sbjct: 651 YAPVDVQSLNVVMSGGDSAYVALLPSGFAILPDGHCNDNGCNGTLQKGGGGNDGGGSLLT 710

Query: 721 VAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           V FQILV+S+PTAKL++ SV TVNNLI+CT+++IKASL
Sbjct: 711 VGFQILVNSLPTAKLTVESVDTVNNLISCTIQKIKASL 748


>gi|109729916|tpg|DAA05772.1| TPA_inf: class IV HD-Zip protein HDZ42 [Selaginella moellendorffii]
          Length = 694

 Score =  792 bits (2045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/708 (56%), Positives = 507/708 (71%), Gaps = 40/708 (5%)

Query: 77  EGASGDDQEQRPN---KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
           EGASGDD E + +    KKRYHRHT  Q +++E FFKECPHPD+KQR+EL RELGLEP Q
Sbjct: 2   EGASGDDFEDQSDLQASKKRYHRHTVQQTRQLEMFFKECPHPDEKQRQELGRELGLEPRQ 61

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMS 193
           VKFWFQN+RTQMK  HER +N+ LR ENE LR +N+  REAL +ASCP CGG    GEMS
Sbjct: 62  VKFWFQNRRTQMKAHHERADNSILRAENENLRTENIALREALKDASCPKCGGQLTPGEMS 121

Query: 194 FDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGI 253
           F E  LR+ENARLR+E++R+SA+ AKY+ +  +   +L    P  P ++           
Sbjct: 122 FTEQQLRIENARLRDELNRVSALVAKYITRSAIPLNIL----PDFPFDIT--------AT 169

Query: 254 GGGEMYGAADLLRSISAP---TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAA 310
           G  +      +L   S P   TE++KP+I ELA+ AMEEL+ +A   +    +S+DGT  
Sbjct: 170 GTSDSVAVPSILEMASRPGGVTESEKPVIAELAIVAMEELLLVAAETDGALWSSVDGTKE 229

Query: 311 VLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSR 370
           VL+++EY R FPRG+GP+  G + EASRET +V+MN   L++ +M+  +W  +FS IVSR
Sbjct: 230 VLSQEEYFRQFPRGLGPRLMGMETEASRETGLVMMNAAGLIDTIMN-GRWVDMFSNIVSR 288

Query: 371 AMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLD 430
           A T +VL+TGV GN+N ALQ++ AE Q+ SPLVPTRE +++RYCKQH E  WA+VDVS+D
Sbjct: 289 AFTTQVLTTGVGGNWNNALQLLYAELQILSPLVPTREFFFLRYCKQHSERVWAIVDVSID 348

Query: 431 NLR--PSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGA 488
            LR  P+P +RCR RPSG  I+++ NGYSKVT V+H+E D R   N+Y  LV +G AFGA
Sbjct: 349 GLRDNPAPQLRCRMRPSGFFIEDLQNGYSKVTAVQHIEADHRQTENIYHGLVCSGAAFGA 408

Query: 489 KRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAH 548
           KRW+A L RQCERL  ++  NI   ++GVI N +GR+SML LA+RM  ++CAGVSAS  H
Sbjct: 409 KRWLAILQRQCERLGIMLTNNISARDLGVIPNANGRRSMLFLAQRMTSNYCAGVSASIVH 468

Query: 549 TWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
           TWTTLSG G +D+RVMTRKSV++PG PPGIVLSAATS W+PV  +R+F+FLRDE  RSEW
Sbjct: 469 TWTTLSGAGEEDIRVMTRKSVNNPGEPPGIVLSAATSLWVPVNSQRLFEFLRDERLRSEW 528

Query: 609 DILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIY 668
           DILSNGG VQE+A +A G+D G  VSLLRV  L   N+SQSNMLILQESCTD + S ++Y
Sbjct: 529 DILSNGGAVQEIARVATGQDPGCVVSLLRVGAL---NTSQSNMLILQESCTDASGSLIVY 585

Query: 669 APVDIVAMNVVLNGGDPDYVALLPSGFAILPDGT----------------SLHGANIGEA 712
           APVDI AMN+V+ GGDP  VALLPSGFAI PDG                 +   A    +
Sbjct: 586 APVDIPAMNLVMQGGDPATVALLPSGFAISPDGAVSQRTTQEGGGAGGGGAADLAEASSS 645

Query: 713 ASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
           +S G+LLTVAFQILV +VPTAKL+L SVATVN+LI+ TV+RIK +L C
Sbjct: 646 SSSGALLTVAFQILVSNVPTAKLNLESVATVNSLISSTVQRIKTALGC 693


>gi|356575937|ref|XP_003556092.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 731

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/739 (54%), Positives = 529/739 (71%), Gaps = 52/739 (7%)

Query: 61  LREEEFDSTKSGSENHEGASGDDQEQRPN---KKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           +R++E++S +SGS+N EGASGDDQ+   +   +KKRYHRHT HQIQE+EAFFKECPHPD+
Sbjct: 1   MRDDEYES-RSGSDNFEGASGDDQDGGDDQPQRKKRYHRHTPHQIQELEAFFKECPHPDE 59

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSN 177
           KQR +LS+ LGLE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KLRA+N   +EA+SN
Sbjct: 60  KQRLDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENIMLRQENDKLRAENSLIKEAMSN 119

Query: 178 ASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPV--VNYPL----- 230
             C NCGGP   G++SF+EH +R+ENARL++E++RI  +A K++GKP+  +  P+     
Sbjct: 120 PVCNNCGGPAIPGQISFEEHQIRIENARLKDELNRICVLANKFLGKPISSLTSPMALTTS 179

Query: 231 ------------------LSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPT 272
                             L  P+P   L+L  G  G QP      M G    L  +    
Sbjct: 180 NSGLELGIGRNGIGGSSTLGTPLP-MGLDLGDGVLGTQPA-----MPGVRSALGLMGNEV 233

Query: 273 EADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGF 332
           + ++ M+I+LA+AAMEEL++M Q   PLW+ SLDG   + N +EY R F   IGPKP G+
Sbjct: 234 QLERSMLIDLALAAMEELLKMTQAESPLWIKSLDGEKEIFNHEEYARLFSPCIGPKPAGY 293

Query: 333 KCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVM 392
             EA+RET +VI+N ++LVE LMD N+W+ +F  +++RA+ L+V+S G+ G  NGALQVM
Sbjct: 294 VTEATRETGIVIINSLALVETLMDANRWAEMFPSMIARAINLDVISNGMGGTRNGALQVM 353

Query: 393 TAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL----DNLRPSPAVRCRRRPSGCL 448
            AE Q+ SPLVP R+  ++R+CKQH EG WAVVDVS+    D     P++ CRR PSGC+
Sbjct: 354 HAEVQLLSPLVPVRQVRFIRFCKQHAEGVWAVVDVSIEIGHDAANAQPSISCRRLPSGCI 413

Query: 449 IQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMAT 508
           +Q+MPNGYSKVTW+EH E D+  VH LY+ L+S+G  FGA RW+ATL RQCE LA +M++
Sbjct: 414 VQDMPNGYSKVTWLEHWEYDENVVHQLYRPLLSSGVGFGAHRWIATLQRQCECLAILMSS 473

Query: 509 NIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLS-GTGADDVRVMTRK 567
           +I +     ++ Q GR+SMLKLA+RM  +FC+GV AS+A  W +L  GT  DD++VMTRK
Sbjct: 474 SISSDSHTALS-QAGRRSMLKLAQRMTSNFCSGVCASSARKWDSLHIGTLGDDMKVMTRK 532

Query: 568 SVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGR 627
           +VDDPG PPGIVLSAATS W+PV  +R+FDFLRDE  RSEWDILSNGG +QEM HIA G+
Sbjct: 533 NVDDPGEPPGIVLSAATSVWMPVSRQRLFDFLRDERLRSEWDILSNGGPMQEMVHIAKGQ 592

Query: 628 DTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDY 687
             GNCVSLLR N   + N++ S+MLILQE+  D + S V+YAPVD+ ++NVV++GGD  Y
Sbjct: 593 GHGNCVSLLRAN---AVNANDSSMLILQETWMDASCSVVVYAPVDVQSLNVVMSGGDSAY 649

Query: 688 VALLPSGFAILPDGT--------SLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGS 739
           VALLPSGFAILPDG         SL      +  SGGSLLTV FQILV+S+PTAKL++ S
Sbjct: 650 VALLPSGFAILPDGHCNDNGCNGSLQKGRGSDDGSGGSLLTVGFQILVNSLPTAKLTVES 709

Query: 740 VATVNNLIACTVERIKASL 758
           V TVNNLI+CT+++IKA+L
Sbjct: 710 VDTVNNLISCTIQKIKAAL 728


>gi|223950133|gb|ACN29150.1| unknown [Zea mays]
 gi|345193169|tpg|DAA34950.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414876613|tpg|DAA53744.1| TPA: outer cell layer1 [Zea mays]
          Length = 803

 Score =  778 bits (2008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/785 (51%), Positives = 548/785 (69%), Gaps = 54/785 (6%)

Query: 24  GLGSSSGLTL--SQPTNMMEGQLHPLDMTQNTSESEIARLREEEFDSTKSGSENHE---- 77
           G  SS  L+L    P   M G++ P+      +   +AR   +  + ++SGS++ +    
Sbjct: 27  GFSSSPALSLGLENPGGGMVGRMLPV--GGAPAAGGMARDAADAENDSRSGSDHLDAMSA 84

Query: 78  GASGDDQEQ----RPNK-KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPL 132
           GA  +D++      P K KKRYHRHT  QIQE+EA FKECPHPD+KQR ELS+ LGL+P 
Sbjct: 85  GAGAEDEDDAEPGNPRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRGELSKRLGLDPR 144

Query: 133 QVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEM 192
           QVKFWFQN+RTQMKTQ ERHEN  L+ EN+KLRA+NM  REA+ +  C +CG P  +GE+
Sbjct: 145 QVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMAIREAMRSPMCGSCGSPAMLGEV 204

Query: 193 SFDEHHLRLENARLREEIDRISAIAAKYVGK--PVVNYPLLSP----PVPSRPLELAVGN 246
           S +E HL +ENARL++E++R+ A+A K++GK  PV++ P+L P    P+PS  LELAVG 
Sbjct: 205 SLEEQHLCIENARLKDELNRVYALATKFLGKPMPVLSGPMLQPNLSLPMPSSSLELAVGG 264

Query: 247 FGAQPGIGGGEMY--GAADLLRSISAPTEA-----------DKPMIIELAVAAMEELIRM 293
                 I   + +  G +  L ++  P  A           D+ M++ELA++AM+EL+++
Sbjct: 265 LRGLGSIPSLDEFAGGVSSPLGTVITPARATGSAPPPMVGVDRSMLLELAISAMDELVKL 324

Query: 294 AQMGEPLWMTSLDGT--AAVLNEDEYVRTFPRGIGP-KPTGFKCEASRETAVVIM-NHIS 349
           AQ+ EPLW+ SL G+    +LN +EY  +F   +G  KP G+  EASRE+ +VI+ N ++
Sbjct: 325 AQVDEPLWLPSLSGSPDKKLLNFEEYAHSFSPSVGAVKPVGYVSEASRESGLVIIDNSLA 384

Query: 350 LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESY 409
           LVE LMDV +WS +FS ++++A  LE +++G+AG+ NGAL +M AE QV SPLVP RE  
Sbjct: 385 LVETLMDVRRWSDMFSCMIAKATVLEEVTSGIAGSRNGALLLMKAELQVLSPLVPIREVT 444

Query: 410 YVRYCKQHGEGTWAVVDVSLDNL---------RPSPAVRCRRRPSGCLIQEMPNGYSKVT 460
           ++R+CKQ  EG WAVVDVS+D L           +  +RCRR PSGC++Q+ PNGY KVT
Sbjct: 445 FLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGNIRCRRLPSGCVMQDTPNGYCKVT 504

Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITN 520
           WVE+ E D+  VH LY+ L+ +G AFGA+RW+A L RQCE LA +M+ +  +     +  
Sbjct: 505 WVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECLAILMSPDTVSANDSSVIT 564

Query: 521 QDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTG---ADDVRVMTRKSVDDPGRPPG 577
           Q+G++SMLKLA RM  +FCAGVSAS+A  W+ L G      +DVRVM RKSVD+PG PPG
Sbjct: 565 QEGKRSMLKLARRMTENFCAGVSASSAREWSKLDGAAGSIGEDVRVMARKSVDEPGEPPG 624

Query: 578 IVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLR 637
           +VLSAATS W+PV P+++F+FLRDE  R+EWDILSNGG +QEMA+IA G++ GN VSLLR
Sbjct: 625 VVLSAATSVWVPVAPEKLFNFLRDEQLRAEWDILSNGGPMQEMANIAKGQEHGNSVSLLR 684

Query: 638 VNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAI 697
            + + SAN  QS+MLILQE+CTD + S V+YAPVDI AM +V+NGGD  YVALLPSGFAI
Sbjct: 685 ASAM-SAN--QSSMLILQETCTDASGSMVVYAPVDIPAMQLVMNGGDSTYVALLPSGFAI 741

Query: 698 LPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKAS 757
           LPDG S  GA   E  +GGSLLTVAFQILV+S PTAKL++ SV TVNNLI CT+++IK +
Sbjct: 742 LPDGPSSVGA---EHKTGGSLLTVAFQILVNSQPTAKLTVESVETVNNLIFCTIKKIKTA 798

Query: 758 LSCES 762
           L C++
Sbjct: 799 LQCDA 803


>gi|186504743|ref|NP_180796.2| homeobox-leucine zipper protein HDG3 [Arabidopsis thaliana]
 gi|187471166|sp|Q9ZV65.2|HDG3_ARATH RecName: Full=Homeobox-leucine zipper protein HDG3; AltName:
           Full=HD-ZIP protein HDG3; AltName: Full=Homeodomain
           GLABRA 2-like protein 3; AltName: Full=Homeodomain
           transcription factor HDG3; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 3; AltName: Full=Protein UPCURVED
           LEAF 1
 gi|151579839|gb|ABS18315.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|330253580|gb|AEC08674.1| homeobox-leucine zipper protein HDG3 [Arabidopsis thaliana]
          Length = 725

 Score =  776 bits (2005), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/709 (54%), Positives = 508/709 (71%), Gaps = 33/709 (4%)

Query: 63  EEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE 122
           +++FDS  + S NH    G++Q  R +KKK+Y+RHTQ QI EMEAFF+ECPHPDDKQR +
Sbjct: 42  DQDFDSGNTSSGNHGEGLGNNQAPR-HKKKKYNRHTQLQISEMEAFFRECPHPDDKQRYD 100

Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPN 182
           LS +LGL+P+Q+KFWFQNKRTQ K Q ER EN++LR  N  LR++N R REA+  A CP 
Sbjct: 101 LSAQLGLDPVQIKFWFQNKRTQNKNQQERFENSELRNLNNHLRSENQRLREAIHQALCPK 160

Query: 183 CGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAK---YVGKPVVNYPLLSPPVPSRP 239
           CGG TAIGEM+F+EHHLR+ NARL EEI ++S  A K     G PV ++P +SPP P   
Sbjct: 161 CGGQTAIGEMTFEEHHLRILNARLTEEIKQLSVTAEKISRLTGIPVRSHPRVSPPNPPPN 220

Query: 240 LELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEAD-KPMIIELAVAAMEELIRMAQMGE 298
            E  +G+ G              +  R  + P +A+ KP+I+ELA  AMEEL+ MAQ+ E
Sbjct: 221 FEFGMGSKG-----------NVGNHSRETTGPADANTKPIIMELAFGAMEELLVMAQVAE 269

Query: 299 PLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVN 358
           PLWM   +GT+  LN DEY +TF  G+GP+  GF+ EASRETA+V M    +VE+LM  N
Sbjct: 270 PLWMGGFNGTSLALNLDEYEKTFRTGLGPRLGGFRTEASRETALVAMCPTGIVEMLMQEN 329

Query: 359 QWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHG 418
            WST+F+GIV RA T E +    AGN+NG LQ+M+AE+QV SPLV TRESY+VRYCKQ G
Sbjct: 330 LWSTMFAGIVGRARTHEQIMADAAGNFNGNLQIMSAEYQVLSPLVTTRESYFVRYCKQQG 389

Query: 419 EGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQ 478
           EG WAVVD+S+D+L P+  ++CRRRPSGCLIQEM +GYSKVTWVEHVEVDD G ++++++
Sbjct: 390 EGLWAVVDISIDHLLPNINLKCRRRPSGCLIQEMHSGYSKVTWVEHVEVDDAGSYSIFEK 449

Query: 479 LVSTGNAFGAKRWVATLDRQCERLASVMATN---IPTGEVGVITNQDGRKSMLKLAERMV 535
           L+ TG AF A RWV TL RQCER++S+++T+   + +G+   +TN  G+ SMLK+AER+ 
Sbjct: 450 LICTGQAFAANRWVGTLVRQCERISSILSTDFQSVDSGDHITLTNH-GKMSMLKIAERIA 508

Query: 536 ISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRV 595
            +F AG++ +T    T  SG   +D+RVMT KSV+DPG+PPG+++ AATSFWLP PP  V
Sbjct: 509 RTFFAGMTNATGS--TIFSGVEGEDIRVMTMKSVNDPGKPPGVIICAATSFWLPAPPNTV 566

Query: 596 FDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQ 655
           FDFLR+   R  WD+L NG ++ ++A I NG D  NC SLLR       ++S+S M+I+Q
Sbjct: 567 FDFLREATHRHNWDVLCNGEMMHKIAEITNGIDKRNCASLLR-----HGHTSKSKMMIVQ 621

Query: 656 ESCTDPTASFVIYAPVDIVAMNVVLN-GGDPDYVALLPSGFAILPDGTSLHGANIGEAAS 714
           E+ TDPTASFV+YAPVD+ +M++ L+ GGDPD+V +LPSGFAI PDGT   G        
Sbjct: 622 ETSTDPTASFVLYAPVDMTSMDITLHGGGDPDFVVILPSGFAIFPDGTGKPGGK-----E 676

Query: 715 GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
           GGSLLT++FQ+LV+S P A+LS+ SVAT  NLI  TV RIK    C++A
Sbjct: 677 GGSLLTISFQMLVESGPEARLSVSSVATTENLIRTTVRRIKDLFPCQTA 725


>gi|255539515|ref|XP_002510822.1| homeobox protein, putative [Ricinus communis]
 gi|223549937|gb|EEF51424.1| homeobox protein, putative [Ricinus communis]
          Length = 799

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/740 (54%), Positives = 523/740 (70%), Gaps = 44/740 (5%)

Query: 56  SEIARLREEEFDSTKSGSENHEGASGDDQE----QRPNKKKRYHRHTQHQIQEMEAFFKE 111
           S + RL+E+ ++S +SGS+N EGASGDDQE    QRP +KK+YHRHT  QIQE+E  FKE
Sbjct: 64  SLVGRLKEDGYES-RSGSDNLEGASGDDQEAGEDQRP-RKKKYHRHTPLQIQELEVCFKE 121

Query: 112 CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRY 171
           CPHPD+KQR ELSR LGLE  Q+KFWFQN+RTQMKTQ ERHEN  LR EN+KLRA+N   
Sbjct: 122 CPHPDEKQRLELSRRLGLESKQIKFWFQNRRTQMKTQLERHENIILRQENDKLRAENELL 181

Query: 172 REALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLL 231
            + +++  C  CGGP   G +SFD+  LR+ENARL++E+ R+ A+A K++G+P+ +    
Sbjct: 182 SQNMTDPMCNGCGGPVVPGPVSFDQQQLRIENARLKDELGRVCALANKFLGRPLSSSANP 241

Query: 232 SPPVPSR-PLELAVGNFG------AQPGIGGGEMYGAA---DLLRSISAPTEA----DKP 277
            PP  S   LELAVG  G       +     G  Y  A    L++ ++ P  +    D+ 
Sbjct: 242 IPPFGSNSKLELAVGRNGYGDLGNVESTFQMGLDYNDAITMPLMKQLTGPMVSEVPYDRS 301

Query: 278 MIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEAS 337
           M+I+LAVAAM+EL+++AQ+  PLW+ SLDG    LN +EY+RTF   IG KP  F  EA+
Sbjct: 302 MMIDLAVAAMDELVKIAQIDNPLWIKSLDGGKDTLNYEEYMRTFSPCIGMKPNSFIPEAT 361

Query: 338 RETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQ 397
           R+T +VI+N ++LVEILMDVN+W   F  +++RA T++V+S+G+AG  NGALQVM AEFQ
Sbjct: 362 RDTGIVIINILALVEILMDVNRWLEAFPSLIARASTIDVISSGMAGTKNGALQVMNAEFQ 421

Query: 398 VPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLD-NLRPS---PAVRCRRRPSGCLIQEMP 453
           V SPLVP R+  ++R+CKQH EG W VVDVS+D NL  S   P   CRR PSGC++QEMP
Sbjct: 422 VVSPLVPVRQVRFLRFCKQHSEGVWVVVDVSIDANLESSNAHPFAACRRLPSGCILQEMP 481

Query: 454 NGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTG 513
           NG SKVTWVEH E D+  VH LY+ ++S+G  FGA+RWVATL R CE +  +M+  I +G
Sbjct: 482 NGCSKVTWVEHSEYDESAVHQLYRSILSSGKGFGAQRWVATLQRYCECMTILMSPTI-SG 540

Query: 514 EVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTW-TTLSGTGADDVRVMTRKSVDDP 572
           E   + +  G+KSMLKLA+RMV +FC+GV AS+   W   L G   +DVR++TRK+++DP
Sbjct: 541 EDQTVMSLSGKKSMLKLAQRMVDNFCSGVCASSLRKWDKLLVGNIGEDVRILTRKNINDP 600

Query: 573 GRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNC 632
           G PPGIVLSAATS WLPV  +R+FDFLRDE +R EWDILS+GG++QEM HI+      NC
Sbjct: 601 GEPPGIVLSAATSVWLPVMRQRLFDFLRDERSRCEWDILSHGGMLQEMVHISKSHSRANC 660

Query: 633 VSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLP 692
           VSLLR   + S N++ S+MLILQE+  D  +S V+YAPVDI +M+VV+NGGD  YVALLP
Sbjct: 661 VSLLRSTAV-SPNANDSSMLILQETWHDVASSLVVYAPVDIPSMSVVMNGGDSTYVALLP 719

Query: 693 SGFAILPDGTSLHGANIGEAASGGSL--------------LTVAFQILVDSVPTAKLSLG 738
           SGF ILPD +S  G   G     G+L              LTV FQILV+++PTAKL++ 
Sbjct: 720 SGFVILPDDSSSQG---GSNFCNGTLVKRDSDGGDGGGCILTVGFQILVNNLPTAKLTVE 776

Query: 739 SVATVNNLIACTVERIKASL 758
           SV TVNNLI+CT++RIKA+L
Sbjct: 777 SVETVNNLISCTIQRIKAAL 796


>gi|67966273|emb|CAG38614.1| homeobox protein OCL1 [Zea mays]
          Length = 803

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/749 (53%), Positives = 533/749 (71%), Gaps = 50/749 (6%)

Query: 58  IARLREEEFDSTKSGSENHE----GASGDDQEQ----RPNK-KKRYHRHTQHQIQEMEAF 108
           +AR   +  + ++SGS++ +    GA  +D++      P K KKRYHRHT  QIQE+EA 
Sbjct: 61  MARDAADAENDSRSGSDHLDAMSAGAGAEDEDDAEPGNPRKRKKRYHRHTPQQIQELEAL 120

Query: 109 FKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
           FKECPHPD+KQR ELS+ LGL+P QVKFWFQN+RTQMKTQ ERHEN  L+ EN+KLRA+N
Sbjct: 121 FKECPHPDEKQRDELSKRLGLDPRQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAEN 180

Query: 169 MRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGK--PVV 226
           M  REA+ +  C +CG P  +GE+S +E HL +ENARL++E++R+ A+A K++GK  PV+
Sbjct: 181 MAIREAMRSPMCGSCGSPAMLGEVSLEEQHLCIENARLKDELNRVYALATKFLGKPMPVL 240

Query: 227 NYPLLSP----PVPSRPLELAVGNFGAQPGIGGGEMY--GAADLLRSISAPTEA------ 274
           + P+L P    P+PS  LELAVG       I   + +  G +  L ++  P  A      
Sbjct: 241 SGPMLQPNLSLPMPSSSLELAVGGLRGLGSIPSLDEFAGGVSSPLGTVITPARATGSAPP 300

Query: 275 -----DKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGT--AAVLNEDEYVRTFPRGIGP 327
                D+ M++ELA++AM+EL+++AQ+ EPLW+ SL G+    +LN +EY  +F   +G 
Sbjct: 301 PMVGVDRSMLLELAISAMDELVKLAQVDEPLWLPSLSGSPDKKLLNFEEYAHSFSPSVGA 360

Query: 328 -KPTGFKCEASRETAVVIM-NHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
            KP G+  EASRE+ +VI+ N ++LVE LMDV +WS +FS ++++A  LE +++G+AG+ 
Sbjct: 361 VKPVGYVSEASRESGLVIIDNSLALVETLMDVRRWSDMFSCMIAKATVLEEVTSGIAGSR 420

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL---------RPSP 436
           NGAL +M AE QV SPLVP RE  ++R+CKQ  EG WAVVDVS+D L           + 
Sbjct: 421 NGALLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAG 480

Query: 437 AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD 496
            +RCRR PSGC++Q+ PNGY KVTWVE+ E D+  VH LY+ L+ +G AFGA+RW+A L 
Sbjct: 481 NIRCRRLPSGCVMQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQ 540

Query: 497 RQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGT 556
           RQCE LA +M+ +  +     +  Q+G++SMLKLA RM  +FCAGVSAS+A  W+ L G 
Sbjct: 541 RQCECLAILMSPDTVSANDSSVITQEGKRSMLKLARRMTENFCAGVSASSAREWSKLDGA 600

Query: 557 G---ADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSN 613
                +DVRVM RKSVD+PG PPG+VLSA TS W+PV P+++F+FLRDE  R+EWDILSN
Sbjct: 601 AGSIGEDVRVMARKSVDEPGEPPGVVLSAPTSVWVPVAPEKLFNFLRDEQLRAEWDILSN 660

Query: 614 GGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDI 673
           GG +QEMA+IA G++ GN VSLLR + + SAN  QS+MLILQE+CTD + S V+YAPVDI
Sbjct: 661 GGPMQEMANIAKGQEHGNSVSLLRASAM-SAN--QSSMLILQETCTDASGSMVVYAPVDI 717

Query: 674 VAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTA 733
            AM +V+NGGD  YVALLPSGFAILPDG S  GA   E  +GGSLLTVAFQILV+S PTA
Sbjct: 718 PAMQLVMNGGDSTYVALLPSGFAILPDGPSSVGA---EHKTGGSLLTVAFQILVNSQPTA 774

Query: 734 KLSLGSVATVNNLIACTVERIKASLSCES 762
           KL++ SV TVNNLI CT+++IK +L C++
Sbjct: 775 KLTVESVETVNNLIFCTIKKIKTALQCDA 803


>gi|3831459|gb|AAC69941.1| putative homeodomain transcription factor [Arabidopsis thaliana]
          Length = 721

 Score =  775 bits (2001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/706 (54%), Positives = 506/706 (71%), Gaps = 31/706 (4%)

Query: 63  EEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE 122
           +++FDS  + S NH    G++Q  R +KKK+Y+RHTQ QI EMEAFF+ECPHPDDKQR +
Sbjct: 42  DQDFDSGNTSSGNHGEGLGNNQAPR-HKKKKYNRHTQLQISEMEAFFRECPHPDDKQRYD 100

Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPN 182
           LS +LGL+P+Q+KFWFQNKRTQ K Q ER EN++LR  N  LR++N R REA+  A CP 
Sbjct: 101 LSAQLGLDPVQIKFWFQNKRTQNKNQQERFENSELRNLNNHLRSENQRLREAIHQALCPK 160

Query: 183 CGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAK---YVGKPVVNYPLLSPPVPSRP 239
           CGG TAIGEM+F+EHHLR+ NARL EEI ++S  A K     G PV ++P +SPP P   
Sbjct: 161 CGGQTAIGEMTFEEHHLRILNARLTEEIKQLSVTAEKISRLTGIPVRSHPRVSPPNPPPN 220

Query: 240 LELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEAD-KPMIIELAVAAMEELIRMAQMGE 298
            E  +G+ G              +  R  + P +A+ KP+I+ELA  AMEEL+ MAQ+ E
Sbjct: 221 FEFGMGSKG-----------NVGNHSRETTGPADANTKPIIMELAFGAMEELLVMAQVAE 269

Query: 299 PLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVN 358
           PLWM   +GT+  LN DEY +TF  G+GP+  GF+ EASRETA+V M    +VE+LM  N
Sbjct: 270 PLWMGGFNGTSLALNLDEYEKTFRTGLGPRLGGFRTEASRETALVAMCPTGIVEMLMQEN 329

Query: 359 QWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHG 418
            WST+F+GIV RA T E +    AGN+NG LQ+M+AE+QV SPLV TRESY+VRYCKQ G
Sbjct: 330 LWSTMFAGIVGRARTHEQIMADAAGNFNGNLQIMSAEYQVLSPLVTTRESYFVRYCKQQG 389

Query: 419 EGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQ 478
           EG WAVVD+S+D+L P+  ++CRRRPSGCLIQEM +GYSKVTWVEHVEVDD G ++++++
Sbjct: 390 EGLWAVVDISIDHLLPNINLKCRRRPSGCLIQEMHSGYSKVTWVEHVEVDDAGSYSIFEK 449

Query: 479 LVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISF 538
           L+ TG AF A RWV TL RQCER++S+++T+  + +   +TN  G+ SMLK+AER+  +F
Sbjct: 450 LICTGQAFAANRWVGTLVRQCERISSILSTDFQSVD-SALTNH-GKMSMLKIAERIARTF 507

Query: 539 CAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDF 598
            AG++ +T    T  SG   +D+RVMT KSV+DPG+PPG+++ AATSFWLP PP  VFDF
Sbjct: 508 FAGMTNATGS--TIFSGVEGEDIRVMTMKSVNDPGKPPGVIICAATSFWLPAPPNTVFDF 565

Query: 599 LRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESC 658
           LR+   R  WD+L NG ++ ++A I NG D  NC SLLR       ++S+S M+I+QE+ 
Sbjct: 566 LREATHRHNWDVLCNGEMMHKIAEITNGIDKRNCASLLR-----HGHTSKSKMMIVQETS 620

Query: 659 TDPTASFVIYAPVDIVAMNVVLN-GGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGS 717
           TDPTASFV+YAPVD+ +M++ L+ GGDPD+V +LPSGFAI PDGT   G        GGS
Sbjct: 621 TDPTASFVLYAPVDMTSMDITLHGGGDPDFVVILPSGFAIFPDGTGKPGGK-----EGGS 675

Query: 718 LLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
           LLT++FQ+LV+S P A+LS+ SVAT  NLI  TV RIK    C++A
Sbjct: 676 LLTISFQMLVESGPEARLSVSSVATTENLIRTTVRRIKDLFPCQTA 721


>gi|242056677|ref|XP_002457484.1| hypothetical protein SORBIDRAFT_03g008090 [Sorghum bicolor]
 gi|241929459|gb|EES02604.1| hypothetical protein SORBIDRAFT_03g008090 [Sorghum bicolor]
          Length = 815

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/747 (52%), Positives = 525/747 (70%), Gaps = 57/747 (7%)

Query: 67  DSTKSGSENHE----GASGDDQEQRP----NKKKRYHRHTQHQIQEMEAFFKECPHPDDK 118
           + ++SGS++ +    G + D+ +  P     +KKRYHRHT  QIQE+EA FKECPHPD+K
Sbjct: 75  NDSRSGSDHLDAMSAGGAEDEDDAEPGNPRKRKKRYHRHTPQQIQELEALFKECPHPDEK 134

Query: 119 QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNA 178
           QR ELS+ LGL+P QVKFWFQN+RTQMKTQ ERHEN  L+ EN+KLRA+NM  REA+ + 
Sbjct: 135 QRGELSKRLGLDPRQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMAIREAMRSP 194

Query: 179 SCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPV-------VNYPLL 231
            C +CG P  +GE+S +E HL +ENARL++E+ R+ A+A K++GKP+       +  P L
Sbjct: 195 MCGSCGSPAMLGEVSLEEQHLCIENARLKDELSRVYALATKFLGKPMSILSAGTMLQPNL 254

Query: 232 SPPVPSRPLELAVG----------NFGAQPGIGGGEMYGAADLLRSISAPTEA------- 274
           S P+PS  LELAVG          +    PG  G    G +  L ++  P          
Sbjct: 255 SLPMPSSSLELAVGGGLRGLGSIPSAATMPGSMGDFAGGVSSPLGTVITPARTTGSAPPP 314

Query: 275 ----DKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGT--AAVLNEDEYVRTFPRGIGPK 328
               D+ M++ELA++AM+EL+++AQ+ EPLW+ SL+G+    +LN +EY  +F   +G K
Sbjct: 315 MVGIDRSMLLELAISAMDELVKLAQIDEPLWLPSLNGSPNKELLNFEEYAHSFLPCVGVK 374

Query: 329 PTGFKCEASRETAVVIM-NHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNG 387
           P G+  EASRE+ +VI  N ++LVE LMD  +WS +FS ++++A  LE +++G+AG+ NG
Sbjct: 375 PVGYVSEASRESGLVIFDNSLALVETLMDERRWSDMFSCMIAKATVLEEVTSGIAGSRNG 434

Query: 388 ALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL---------RPSPAV 438
            L +M AE QV SPLVP RE  ++R+CKQ  EG WAVVDVS+D L           +  +
Sbjct: 435 GLLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDQNSATASNAGNI 494

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           RCRR PSGC++Q+ PNGY KVTWVEH E D+  VH LY+ L+ +G AFGA+RW+A L RQ
Sbjct: 495 RCRRLPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLAMLQRQ 554

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTG- 557
           CE LA +M+ +  +     +  Q+G++SMLKLA RM  +FCAGVSAS+A  W+ L G   
Sbjct: 555 CECLAILMSPDTVSANDSSVITQEGKRSMLKLARRMTENFCAGVSASSAREWSKLDGAAG 614

Query: 558 --ADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGG 615
              +DVRVM RKSVD+PG PPG+VLSAATS W+PV P+++F+FLRDE  R+EWDILSNGG
Sbjct: 615 SIGEDVRVMARKSVDEPGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRAEWDILSNGG 674

Query: 616 VVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVA 675
            +QEMA+IA G++ GN VSLLR + + SAN  QS+MLILQE+CTD + S V+YAPVDI A
Sbjct: 675 PMQEMANIAKGQEHGNSVSLLRASAM-SAN--QSSMLILQETCTDASGSMVVYAPVDIPA 731

Query: 676 MNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKL 735
           M +V+NGGD  YVALLPSGFAILPDG S  GA   E  +GGSLLTVAFQILV+S PTAKL
Sbjct: 732 MQLVMNGGDSTYVALLPSGFAILPDGPSGVGA---EHKTGGSLLTVAFQILVNSQPTAKL 788

Query: 736 SLGSVATVNNLIACTVERIKASLSCES 762
           ++ SV TVNNLI+CT+++IK +L C++
Sbjct: 789 TVESVETVNNLISCTIKKIKTALQCDA 815


>gi|162463494|ref|NP_001105493.1| outer cell layer1 [Zea mays]
 gi|5531484|emb|CAB51059.1| OCL1 homeobox protein [Zea mays]
          Length = 784

 Score =  773 bits (1996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/749 (53%), Positives = 533/749 (71%), Gaps = 50/749 (6%)

Query: 58  IARLREEEFDSTKSGSENHE----GASGDDQEQ----RPNK-KKRYHRHTQHQIQEMEAF 108
           +AR   +  + ++SGS++ +    GA  +D++      P K KKRYHRHT  QIQE+EA 
Sbjct: 42  MARDAADAENDSRSGSDHLDAMSAGAGAEDEDDAEPGNPRKRKKRYHRHTPQQIQELEAL 101

Query: 109 FKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
           FKECPHPD+KQR ELS+ LGL+P QVKFWFQN+RT+MKTQ ERHEN  L+ EN+KLRA+N
Sbjct: 102 FKECPHPDEKQRGELSKRLGLDPRQVKFWFQNRRTRMKTQLERHENALLKQENDKLRAEN 161

Query: 169 MRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGK--PVV 226
           M  REA+ +  C +CG P  +GE+S +E HL +ENARL++E++R+ A+A K++GK  PV+
Sbjct: 162 MAIREAMRSPMCGSCGSPAMLGEVSLEEQHLCIENARLKDELNRVYALATKFLGKPMPVL 221

Query: 227 NYPLLSP----PVPSRPLELAVGNFGAQPGIGGGEMY--GAADLLRSISAPTEA------ 274
           + P+L P    P+PS  LELAVG       I   + +  G +  L ++  P  A      
Sbjct: 222 SGPMLQPNLSLPMPSSSLELAVGGLRGLGSIPSLDEFAGGVSSPLGTVITPARATGSAPP 281

Query: 275 -----DKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGT--AAVLNEDEYVRTFPRGIGP 327
                D+ M++ELA++AM+EL+++AQ+ EPLW+ SL G+    +LN +EY  +F   +G 
Sbjct: 282 PMVGVDRSMLLELAISAMDELVKLAQVDEPLWLPSLSGSPDKKLLNFEEYAHSFSPSVGA 341

Query: 328 -KPTGFKCEASRETAVVIM-NHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
            KP G+  EASRE+ +VI+ N ++LVE LMDV +WS +FS ++++A  LE +++G+AG+ 
Sbjct: 342 VKPVGYVSEASRESGLVIIDNSLALVETLMDVRRWSDMFSCMIAKATVLEEVTSGIAGSR 401

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL---------RPSP 436
           NGAL +M AE QV SPLVP RE  ++R+CKQ  EG WAVVDVS+D L           + 
Sbjct: 402 NGALLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAG 461

Query: 437 AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD 496
            +RCRR PSGC++Q+ PNGY KVTWVE+ E D+  VH LY+ L+ +G AFGA+RW+A L 
Sbjct: 462 NIRCRRLPSGCVMQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQ 521

Query: 497 RQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGT 556
           RQCE LA +M+ +  +     +  Q+G++SMLKLA RM  +FCAGVSAS+A  W+ L G 
Sbjct: 522 RQCECLAILMSPDTVSANDSSVITQEGKRSMLKLARRMTENFCAGVSASSAREWSKLDGA 581

Query: 557 G---ADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSN 613
                +DVRVM RKSVD+PG PPG+VLSA TS W+PV P+++F+FLRDE  R+EWDILSN
Sbjct: 582 AGSIGEDVRVMARKSVDEPGEPPGVVLSARTSVWVPVAPEKLFNFLRDEQLRAEWDILSN 641

Query: 614 GGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDI 673
           GG +QEMA+IA G++ GN VSLLR + + SAN  QS+MLILQE+CTD + S V+YAPVDI
Sbjct: 642 GGPMQEMANIAKGQEHGNSVSLLRASAM-SAN--QSSMLILQETCTDASGSMVVYAPVDI 698

Query: 674 VAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTA 733
            AM +V+NGGD  YVALLPSGFAILPDG S  GA   E  +GGSLLTVAFQILV+S PTA
Sbjct: 699 PAMQLVMNGGDSTYVALLPSGFAILPDGPSSVGA---EHKTGGSLLTVAFQILVNSQPTA 755

Query: 734 KLSLGSVATVNNLIACTVERIKASLSCES 762
           KL++ SV TVNNLI CT+++IK +L C++
Sbjct: 756 KLTVESVETVNNLIFCTIKKIKTALQCDA 784


>gi|30678721|ref|NP_567183.2| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
 gi|122223902|sp|Q0WV12.1|ANL2_ARATH RecName: Full=Homeobox-leucine zipper protein ANTHOCYANINLESS 2;
           AltName: Full=HD-ZIP protein ANL2; AltName:
           Full=Homeodomain protein AHDP; AltName: Full=Homeodomain
           transcription factor ANL2
 gi|110742219|dbj|BAE99036.1| homeodomain protein AHDP [Arabidopsis thaliana]
 gi|332656526|gb|AEE81926.1| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
          Length = 802

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/717 (55%), Positives = 516/717 (71%), Gaps = 31/717 (4%)

Query: 60  RLREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           R REEE +S +SGS+N EG SG+DQ+   +P +KKRYHRHT  QIQE+E+ FKECPHPD+
Sbjct: 103 RSREEEHES-RSGSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHPDE 161

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSN 177
           KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KLRA+NM  REA+ N
Sbjct: 162 KQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRN 221

Query: 178 ASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPS 237
             C NCGGP  +G++S +EHHLR+ENARL++E+DR+  +  K++G    +         +
Sbjct: 222 PICTNCGGPAMLGDVSLEEHHLRIENARLKDELDRVCNLTGKFLGHHHNH-------HYN 274

Query: 238 RPLELAV------GNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELI 291
             LELAV      G+F   P  GGG         +S        K +++ELA+ AM+EL+
Sbjct: 275 SSLELAVGTNNNGGHFAFPPDFGGGGGCLPPQQQQSTVINGIDQKSVLLELALTAMDELV 334

Query: 292 RMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLV 351
           ++AQ  EPLW+ SLDG    LN+DEY+RTF      KPTG   EASR + +VI+N ++LV
Sbjct: 335 KLAQSEEPLWVKSLDGERDELNQDEYMRTFS---STKPTGLATEASRTSGMVIINSLALV 391

Query: 352 EILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYV 411
           E LMD N+W+ +F   V+RA T +V+S G+AG  NGALQ+M AE QV SPLVP R   ++
Sbjct: 392 ETLMDSNRWTEMFPCNVARATTTDVISGGMAGTINGALQLMNAELQVLSPLVPVRNVNFL 451

Query: 412 RYCKQHGEGTWAVVDVSLDNLRPSP--AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 469
           R+CKQH EG WAVVDVS+D +R +   A   RR PSGC++Q++ NGYSKVTWVEH E D+
Sbjct: 452 RFCKQHAEGVWAVVDVSIDPVRENSGGAPVIRRLPSGCVVQDVSNGYSKVTWVEHAEYDE 511

Query: 470 RGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK 529
             +H LY+ L+ +G  FG++RW+ATL RQCE LA ++++++ + +   IT   GRKSMLK
Sbjct: 512 NQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAILISSSVTSHDNTSIT-PGGRKSMLK 570

Query: 530 LAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGRPPGIVLSAATSFWL 588
           LA+RM  +FC+G+SA + H W+ L+    D DVRVMTRKSVDDPG PPGIVLSAATS WL
Sbjct: 571 LAQRMTFNFCSGISAPSVHNWSKLTVGNVDPDVRVMTRKSVDDPGEPPGIVLSAATSVWL 630

Query: 589 PVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQ 648
           P  P+R++DFLR+E  R EWDILSNGG +QEMAHI  G+D G  VSLLR N +   N++Q
Sbjct: 631 PAAPQRLYDFLRNERMRCEWDILSNGGPMQEMAHITKGQDQG--VSLLRSNAM---NANQ 685

Query: 649 SNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGAN 708
           S+MLILQE+C D + + V+YAPVDI AM+VV+NGGD  YVALLPSGFA+LPDG    G +
Sbjct: 686 SSMLILQETCIDASGALVVYAPVDIPAMHVVMNGGDSSYVALLPSGFAVLPDGGIDGGGS 745

Query: 709 IGEA---ASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
                    GGSLLTVAFQILV+++PTAKL++ SV TVNNLI+CTV++I+A+L CES
Sbjct: 746 GDGDQRPVGGGSLLTVAFQILVNNLPTAKLTVESVETVNNLISCTVQKIRAALQCES 802


>gi|326490099|dbj|BAJ94123.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/754 (53%), Positives = 517/754 (68%), Gaps = 62/754 (8%)

Query: 58  IARLREEEFDSTKSGSENHEGASG---DDQEQRPN------KKKRYHRHTQHQIQEMEAF 108
           +AR  E + DS +SGS++ +  SG   DD +  P+      +KKRYHRHT  QIQE+EA 
Sbjct: 54  MARDAEAQNDS-RSGSDHLDAISGVGDDDDDAEPSGSNPRKRKKRYHRHTPQQIQELEAL 112

Query: 109 FKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
           FKECPHPD+KQR ELS+ L L+  QVKFWFQN+RTQMKTQ ERHEN  L+ ENEKLR +N
Sbjct: 113 FKECPHPDEKQRGELSKRLSLDARQVKFWFQNRRTQMKTQLERHENALLKQENEKLRTEN 172

Query: 169 MRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNY 228
           +  REA+    C  CG P  +GE+S +E HLR+ENARL++E++R+  +A K++GKPV   
Sbjct: 173 LTIREAMRTPMCGGCGSPAMLGEVSLEEQHLRIENARLKDELNRVCTLATKFLGKPVSLL 232

Query: 229 ------PLLSPPVPSRPLELAVGNFGAQPGIGG------GEMY----GAADLLRSISAPT 272
                 P LS P+P+  LELAVG  G   GIG       G M     GA+  + ++  P 
Sbjct: 233 SPLQLQPHLSMPLPNSSLELAVGGIG---GIGSMQSSMHGMMSEYAGGASSSMGTVITPA 289

Query: 273 EA-----------DKPMIIELAVAAMEELIRMAQMGEPLWMTSLDG--TAAVLNEDEYVR 319
            A           D+ + +ELA++AM+EL++MAQ  +P W+T L G      LN +EY+ 
Sbjct: 290 RATGSALASMVDIDRSVFLELAISAMDELVKMAQTDDPFWVTGLPGFPDKESLNFEEYLH 349

Query: 320 TFPRGIGPKPTGFKCEASRETAVVIM-NHISLVEILMDVNQWSTVFSGIVSRAMTLEVLS 378
           +    IG KP GF  EASRE+ +VI+ N ++LVE LMD  +WS +FS ++++A  LE +S
Sbjct: 350 SSQHCIGMKPAGFVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATILEEVS 409

Query: 379 TGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL------ 432
            G+ G  NGAL +M AE QV SPLVP RE  ++R+CKQ  EG WAVVDVS+D L      
Sbjct: 410 NGIGGTRNGALLLMKAELQVLSPLVPIREVIFLRFCKQLAEGAWAVVDVSIDGLLSNQNS 469

Query: 433 ---RPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAK 489
                   ++CRR PSGC++Q+ PNGY KVTWVEH E D+  VH  Y+ L+ +G AFGA 
Sbjct: 470 ATTSAGANLKCRRLPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQFYRPLLRSGLAFGAS 529

Query: 490 RWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHT 549
           RW+ATL RQCE LA +M++   +       +Q+GR+SMLKLA RM  +FCAGVSAS+A  
Sbjct: 530 RWLATLQRQCECLAILMSSATASPNEQTAISQEGRRSMLKLARRMTENFCAGVSASSARE 589

Query: 550 WTTLSG-TGA--DDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRS 606
           W+ L G TG+  +DVRVM RKSV +PG PPG+VLSAATS W+P+ P+++FDFLRDE  R+
Sbjct: 590 WSKLDGATGSIGEDVRVMARKSVSEPGEPPGVVLSAATSVWVPIAPEKLFDFLRDEQLRA 649

Query: 607 EWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFV 666
           EWDILSNGG +QEMA IA G   GN VSLLR + + SAN  QS+MLILQE+CTD + S V
Sbjct: 650 EWDILSNGGPMQEMARIAKGHQNGNSVSLLRASAM-SAN--QSSMLILQETCTDASGSIV 706

Query: 667 IYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQIL 726
           +YAPVDI AM +V+NGGD  YVALLPSGFAILPDG S+      E  +GGSLLTVAFQIL
Sbjct: 707 VYAPVDIPAMQLVMNGGDSTYVALLPSGFAILPDGPSIG----SEHKTGGSLLTVAFQIL 762

Query: 727 VDSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
           V+S PTAKL++ SV TVNNLI+CT+++IK +L C
Sbjct: 763 VNSQPTAKLTVESVETVNNLISCTIKKIKTALQC 796


>gi|357444035|ref|XP_003592295.1| Homeodomain protein (HB2) [Medicago truncatula]
 gi|355481343|gb|AES62546.1| Homeodomain protein (HB2) [Medicago truncatula]
          Length = 842

 Score =  765 bits (1976), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/764 (51%), Positives = 534/764 (69%), Gaps = 59/764 (7%)

Query: 40  MEGQLHPLDMTQNTSESEI-ARLREEEFDSTKSGSENH--EGASGDDQEQRP----NKKK 92
           MEGQ   + +T ++ ++ +  R+RE+E++S +SGS+N   EG SGDDQ+        +KK
Sbjct: 1   MEGQ-SEIGLTGDSLDTGLLGRMREDEYES-RSGSDNFDLEGLSGDDQDGGDDGQRKRKK 58

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERH 152
           RYHRHT +QIQE+E+FFKECPHPD+KQR +LS+ LGLE  QVKFWFQN+RTQMKTQ ERH
Sbjct: 59  RYHRHTPNQIQELESFFKECPHPDEKQRLDLSKRLGLENKQVKFWFQNRRTQMKTQLERH 118

Query: 153 ENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDR 212
           EN  LR EN+KLR +N   +EA+ N  C NCGGP   G++ F+EH +R+ENARL++E++R
Sbjct: 119 ENIMLRQENDKLRGENSMMKEAMVNPICNNCGGPAIPGQILFEEHQIRIENARLKDELNR 178

Query: 213 ISAIAAKYVGKPVVNY--PLLSPPVPS---------------------RPLELAVGNFGA 249
           I A+  K++GKP+ +   P+  P   S                      P+ L +G+  +
Sbjct: 179 ICALTNKFLGKPISSLANPMALPTSNSGLELGIGRNGFGGGSSSLGNPLPMGLDLGDGRS 238

Query: 250 QPGIGG--GEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDG 307
            PGI    G M  ++D+        + ++  +I+LA+AAM+EL++MAQ   P+W+  LDG
Sbjct: 239 MPGISSPMGLMGSSSDV--------QLERSALIDLALAAMDELLKMAQTDSPVWIKGLDG 290

Query: 308 TAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGI 367
              +LN++EY R     IGPKP GF  EA+R+T +VI+N ++LVE LMD N+++ +F  +
Sbjct: 291 ERDMLNQEEYARLISSCIGPKPAGFVTEATRDTGIVIINSLALVETLMDANRYADMFQSM 350

Query: 368 VSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDV 427
           ++R+  L+VLS G+ G  NGA+ +M  E Q+ SPLVP R+   +R+CKQH EG WAVVDV
Sbjct: 351 IARSANLDVLSGGIGGTRNGAIHLMHTEVQLLSPLVPVRQVRILRFCKQHAEGVWAVVDV 410

Query: 428 SL----DNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTG 483
           S+    D     P + CRR PSGC++Q+MPNGYSKVTW+EH E D+  VH LY+ L+ +G
Sbjct: 411 SVEIGHDPSNAQPFISCRRLPSGCIVQDMPNGYSKVTWIEHWEYDESIVHQLYRPLLISG 470

Query: 484 NAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVS 543
             FGA RW+ATL RQCE LA +M+++I   +   ++ Q GR+SMLKLA+RM  +FC+GV 
Sbjct: 471 FGFGAHRWIATLQRQCEGLAILMSSSISNDDHTALS-QAGRRSMLKLAQRMTNNFCSGVC 529

Query: 544 ASTAHTWTTLS-GTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDE 602
           AS+A  W +L  GT +DD+RVMTRK+VDDPG PPGIVLSAATS W+PV  +R+FDFLRDE
Sbjct: 530 ASSARKWDSLQMGTLSDDMRVMTRKNVDDPGEPPGIVLSAATSVWMPVSRQRLFDFLRDE 589

Query: 603 NTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPT 662
             RSEWDILSNGG +QEM HIA G+  GNCVSLLR N   + N++ S+MLILQE+  D +
Sbjct: 590 RLRSEWDILSNGGPMQEMVHIAKGQGQGNCVSLLRAN---AVNANDSSMLILQETWMDTS 646

Query: 663 ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANI--------GEAAS 714
            S V+YAPVD  ++NVV++GGD  YVALLPSGFAI+PDG    G  +        G +  
Sbjct: 647 CSVVVYAPVDGQSLNVVMSGGDSAYVALLPSGFAIVPDGNDPSGYGMSNGTLQKGGASDG 706

Query: 715 GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           GGSLLTV FQILV+S+PTAKL++ SV TVNNLI+CT+++IKA+L
Sbjct: 707 GGSLLTVGFQILVNSLPTAKLTMESVDTVNNLISCTIQKIKAAL 750


>gi|5702094|gb|AAD47139.1|AF077335_1 Anthocyaninless2 [Arabidopsis thaliana]
          Length = 801

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/716 (55%), Positives = 512/716 (71%), Gaps = 30/716 (4%)

Query: 60  RLREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           R REEE +S +SGS+N EG SG+DQ+   +P +KKRYHRHT  QIQE+E+ FKECPHPD+
Sbjct: 103 RSREEEHES-RSGSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHPDE 161

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSN 177
           KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KLRA+NM  REA+ N
Sbjct: 162 KQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRN 221

Query: 178 ASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPS 237
             C NCGGP  +G++S +EHHLR+ENARL++E+DR+  +  K++G    +         +
Sbjct: 222 PICTNCGGPAMLGDVSLEEHHLRIENARLKDELDRVCNLTGKFLGHHHNH-------HYN 274

Query: 238 RPLELAV-----GNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIR 292
             LELAV     G+F   P  GGG         +S        K +++ELA+ AM+EL++
Sbjct: 275 SSLELAVGTNNGGHFAFPPDFGGGGGCLPPQQQQSTVINGIDQKSVLLELALTAMDELVK 334

Query: 293 MAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVE 352
           +AQ  EPLW+ SLDG    LN+DEY+RTF      KPTG   EASR + +VI+N ++LVE
Sbjct: 335 LAQSEEPLWVKSLDGERDELNQDEYMRTFS---STKPTGLATEASRTSGMVIINSLALVE 391

Query: 353 ILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVR 412
            LMD N+W+ +F   V+RA T +V+S G+AG  NGALQ+M AE QV SPLVP R   ++R
Sbjct: 392 TLMDSNRWTEMFPCNVARATTTDVISGGMAGTINGALQLMNAELQVLSPLVPVRNVNFLR 451

Query: 413 YCKQHGEGTWAVVDVSLDNLRPSP--AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR 470
           +CKQH EG W VVDVS+D +R +   A   RR PSGC++Q++ NGYSKVTWVEH E D+ 
Sbjct: 452 FCKQHAEGVWPVVDVSIDPVRENSGGAPVIRRLPSGCVVQDVSNGYSKVTWVEHAEYDEN 511

Query: 471 GVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKL 530
            +H LY+ L+ +G  FG++RW+ATL RQCE LA +M++++ + +   IT   GRKSMLKL
Sbjct: 512 QIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAILMSSSVTSHDNTSIT-PGGRKSMLKL 570

Query: 531 AERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGRPPGIVLSAATSFWLP 589
           A+RM  +FC+G+SA + H W+ L+    D DVRVMTRKSVDDPG PPGIVLSAATS WLP
Sbjct: 571 AQRMTFNFCSGISAPSVHNWSKLTVGNVDPDVRVMTRKSVDDPGEPPGIVLSAATSVWLP 630

Query: 590 VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQS 649
             P+R++DFLR+E  R EWDILSNGG +QEMAHI  G+D G  VSLLR N +   N++QS
Sbjct: 631 AAPQRLYDFLRNERMRCEWDILSNGGPMQEMAHITKGQDQG--VSLLRSNAM---NANQS 685

Query: 650 NMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANI 709
           +MLILQE+C D + + V+YAPVDI AM+VV+NGGD  YVALLPSGFA+  DG    G + 
Sbjct: 686 SMLILQETCIDASGALVVYAPVDIPAMHVVMNGGDSSYVALLPSGFAVSSDGGIDGGGSG 745

Query: 710 GEA---ASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
                   GGSLLTVAFQILV+++PTAKL++ SV TVNNLI+CTV++I+A+L C S
Sbjct: 746 DGDQRPVGGGSLLTVAFQILVNNLPTAKLTVESVETVNNLISCTVQKIRAALQCGS 801


>gi|15233048|ref|NP_191674.1| homeobox-leucine zipper protein HDG1 [Arabidopsis thaliana]
 gi|75335834|sp|Q9M2E8.1|HDG1_ARATH RecName: Full=Homeobox-leucine zipper protein HDG1; AltName:
           Full=HD-ZIP protein HDG1; AltName: Full=Homeodomain
           GLABRA 2-like protein 1; AltName: Full=Homeodomain
           transcription factor HDG1; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 1
 gi|6850882|emb|CAB71045.1| homeobox protein [Arabidopsis thaliana]
 gi|15292865|gb|AAK92803.1| putative homeobox protein [Arabidopsis thaliana]
 gi|20465805|gb|AAM20391.1| putative homeobox protein [Arabidopsis thaliana]
 gi|332646640|gb|AEE80161.1| homeobox-leucine zipper protein HDG1 [Arabidopsis thaliana]
          Length = 808

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/778 (51%), Positives = 522/778 (67%), Gaps = 61/778 (7%)

Query: 27  SSSGLTLSQPTNMMEGQLHPLDMTQNTS--ESEIARL--REEEFDSTKSGSENHEGASGD 82
           SSSGL+L   TN         +M++N    ES ++R   R E+ +S +S S+N E  SGD
Sbjct: 49  SSSGLSLGLQTNG--------EMSRNGEIMESNVSRKSSRGEDVES-RSESDNAEAVSGD 99

Query: 83  DQE--QRP-NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQ 139
           D +   RP  KKKRYHRHT  QIQ++E+ FKEC HPD+KQR +LSR L L+P QVKFWFQ
Sbjct: 100 DLDTSDRPLKKKKRYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRLNLDPRQVKFWFQ 159

Query: 140 NKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHL 199
           N+RTQMKTQ ERHEN  LR EN+KLRA+NM  REA+ N  C NCGGP  IGE+S +E HL
Sbjct: 160 NRRTQMKTQIERHENALLRQENDKLRAENMSVREAMRNPMCGNCGGPAVIGEISMEEQHL 219

Query: 200 RLENARLREEIDRISAIAAKYVGKP------------------------VVNYPLLSPPV 235
           R+EN+RL++E+DR+ A+  K++G+                            + L SP +
Sbjct: 220 RIENSRLKDELDRVCALTGKFLGRSNGSHHIPDSALVLGVGVGSGGCNVGGGFTLSSPLL 279

Query: 236 PSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQ 295
           P       + N     G G G +    +  + +S      +   ++LA+AAM+EL++MAQ
Sbjct: 280 PQASPRFEISN-----GTGSG-LVATVNRQQPVSVSDFDQRSRYLDLALAAMDELVKMAQ 333

Query: 296 MGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILM 355
             EPLW+ S D    VLN++EY  +F R +GPK  GF  EAS+E   VI+N ++LVE LM
Sbjct: 334 TREPLWVRSSDSGFEVLNQEEYDTSFSRCVGPKQDGFVSEASKEAGTVIINSLALVETLM 393

Query: 356 DVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCK 415
           D  +W+ +F  +VSR  T E++S+G+ G  NGAL +M AE Q+ SPLVP R+  ++R+CK
Sbjct: 394 DSERWAEMFPSMVSRTSTTEIISSGMGGR-NGALHLMHAELQLLSPLVPVRQVSFLRFCK 452

Query: 416 QHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNL 475
           QH EG WAVVDVS+D++R   +  CRR PSGCL+Q+M NGYSKVTW+EH E D+  +H L
Sbjct: 453 QHAEGVWAVVDVSIDSIREGSSSSCRRLPSGCLVQDMANGYSKVTWIEHTEYDENHIHRL 512

Query: 476 YKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMV 535
           Y+ L+  G AFGA RW+A L RQCE L  +M++ + T       N +GRKSMLKLA+RM 
Sbjct: 513 YRPLLRCGLAFGAHRWMAALQRQCECLTILMSSTVSTSTNPSPINCNGRKSMLKLAKRMT 572

Query: 536 ISFCAGVSASTAHTWTTLS-GTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKR 594
            +FC GV AS+   W+ L+ G   +DVR+MTRKSV++PG PPGI+L+AATS W+PV P+R
Sbjct: 573 DNFCGGVCASSLQKWSKLNVGNVDEDVRIMTRKSVNNPGEPPGIILNAATSVWMPVSPRR 632

Query: 595 VFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLIL 654
           +FDFL +E  RSEWDILSNGG ++EMAHIA G D  N VSLLR + +   N++QS+MLIL
Sbjct: 633 LFDFLGNERLRSEWDILSNGGPMKEMAHIAKGHDRSNSVSLLRASAI---NANQSSMLIL 689

Query: 655 QESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPD---GTSLHGA---- 707
           QE+  D   + V+YAPVDI AM  V+NGGD  YVALLPSGFAILP+   GT    A    
Sbjct: 690 QETSIDAAGAVVVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILPNGQAGTQRCAAEERN 749

Query: 708 ---NIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
              N G    GGSLLTVAFQILV+S+PTAKL++ SV TVNNLI+CTV++IKA+L C+S
Sbjct: 750 SIGNGGCMEEGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCDS 807


>gi|5050910|emb|CAB45018.1| homeodomain GLABRA2 like 1 protein [Arabidopsis thaliana]
          Length = 808

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/778 (51%), Positives = 521/778 (66%), Gaps = 61/778 (7%)

Query: 27  SSSGLTLSQPTNMMEGQLHPLDMTQNTS--ESEIARL--REEEFDSTKSGSENHEGASGD 82
           SSSGL+L   TN         +M++N    ES ++R   R E+ +S +S S+N E  SGD
Sbjct: 49  SSSGLSLGLQTNG--------EMSRNGEIMESNVSRKSSRGEDVES-RSESDNAEAVSGD 99

Query: 83  DQE--QRP-NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQ 139
           D +   RP  KKKRYHRHT  QIQ++E+ FKEC HPD+KQR +LSR L L+P QVKFWFQ
Sbjct: 100 DLDTSDRPLKKKKRYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRLNLDPRQVKFWFQ 159

Query: 140 NKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHL 199
           N+RTQMKTQ ERHEN  LR EN+KLRA+NM  REA+ N  C NCGGP  IGE+S +E HL
Sbjct: 160 NRRTQMKTQIERHENALLRQENDKLRAENMSVREAMRNPMCGNCGGPAVIGEISMEEQHL 219

Query: 200 RLENARLREEIDRISAIAAKYVGKP------------------------VVNYPLLSPPV 235
           R+EN+RL++E+DR+ A+  K++G+                            + L SP +
Sbjct: 220 RIENSRLKDELDRVCALTGKFLGRSNGSHHIPDSALVLGVGVGSGGCNVGGGFTLSSPLL 279

Query: 236 PSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQ 295
           P       + N     G G G +    +  + +S      +   ++LA+AAM+EL++MAQ
Sbjct: 280 PQASPRFEISN-----GTGSG-LVATVNRQQPVSVSDFDQRSRYLDLALAAMDELVKMAQ 333

Query: 296 MGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILM 355
             EPLW+ S D    VLN++EY  +F R +GPK  GF  EAS+E   VI+N ++LVE LM
Sbjct: 334 TREPLWVRSSDSGFEVLNQEEYDTSFSRCVGPKQDGFVSEASKEAGTVIINSLALVETLM 393

Query: 356 DVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCK 415
           D  +W+ +F  +VSR  T E++S+G+ G  NGAL +M AE Q+ SPLVP R+  ++R+CK
Sbjct: 394 DSERWAEMFPSMVSRTSTTEIISSGMGGR-NGALHLMHAELQLLSPLVPVRQVSFLRFCK 452

Query: 416 QHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNL 475
           QH EG WAVVDVS+D++R   +  CRR PSGCL+Q+M NGYSKVTW+EH E D+  +H L
Sbjct: 453 QHAEGVWAVVDVSIDSIREGSSSSCRRLPSGCLVQDMANGYSKVTWIEHTEYDENHIHRL 512

Query: 476 YKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMV 535
           Y+ L+  G AFGA RW+A L RQCE L  +M++ + T       N +GRKSMLKLA+RM 
Sbjct: 513 YRPLLRCGLAFGAHRWMAALQRQCECLTILMSSTVSTSTNPSPINCNGRKSMLKLAKRMT 572

Query: 536 ISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKR 594
            +FC GV AS+   W+ L+    D DVR+MTRKSV++PG PPGI+L+AATS W+PV P+R
Sbjct: 573 DNFCGGVCASSLQKWSKLNVGNVDKDVRIMTRKSVNNPGEPPGIILNAATSVWMPVSPRR 632

Query: 595 VFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLIL 654
           +FDFL +E  RSEWDILSNGG ++EMAHIA G D  N VSLLR + +   N++QS+MLIL
Sbjct: 633 LFDFLGNERLRSEWDILSNGGPMKEMAHIAKGHDRSNSVSLLRASAI---NANQSSMLIL 689

Query: 655 QESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPD---GTSLHGA---- 707
           QE+  D   + V+YAPVDI AM  V+NGGD  YVALLPSGFAILP+   GT    A    
Sbjct: 690 QETSIDAAGAVVVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILPNGQAGTQRCAAEERN 749

Query: 708 ---NIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
              N G    GGSLLTVAFQILV+S+PTAKL++ SV TVNNLI+CTV++IKA+L C+S
Sbjct: 750 SIGNGGCMEEGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCDS 807


>gi|357136990|ref|XP_003570085.1| PREDICTED: homeobox-leucine zipper protein ROC5-like [Brachypodium
           distachyon]
          Length = 791

 Score =  758 bits (1957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/743 (53%), Positives = 517/743 (69%), Gaps = 56/743 (7%)

Query: 64  EEFDSTKSGSENHEGASG---DDQEQRPN----KKKRYHRHTQHQIQEMEAFFKECPHPD 116
           E  + ++SGS++ +  SG   DD +  P+    +KKRYHRHT  QIQE+EA FKECPHPD
Sbjct: 54  EAQNDSRSGSDHLDAISGVGDDDDDAEPSNPRKRKKRYHRHTPQQIQELEALFKECPHPD 113

Query: 117 DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALS 176
           +KQR ELSR L L+  QVKFWFQN+RTQMKTQ ERHEN  L+ EN+KLRA+NM  REA+ 
Sbjct: 114 EKQRAELSRRLSLDARQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMTIREAMR 173

Query: 177 NASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNY------PL 230
           +  C  CG P  +GE+S +E HLR+ENARL++E++R+ A+A K++GKPV         P 
Sbjct: 174 SPMCGGCGSPAMLGEVSLEEQHLRIENARLKDELNRVCALATKFLGKPVSLMSPLQLQPH 233

Query: 231 LSPPVPSRPLELAVGNFGA----QPGIGG--GEMYGAAD------------LLRSISAPT 272
           LS  +P+  LELAVG  G     QP + G   E  G A                +I++ T
Sbjct: 234 LSMHLPNSSLELAVGGMGGIGSMQPTLHGTMSEFAGGASSSMGTVITPARATGSAIASIT 293

Query: 273 EADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGT--AAVLNEDEYVRTFPRGIGPKPT 330
           + D+ M +ELA++AM+ELI+MAQ+ +PLW+T L G+     LN +EY  +F  GIG KP 
Sbjct: 294 DIDRSMFLELAISAMDELIKMAQVDDPLWVTGLPGSPNKETLNFEEY-HSFLPGIGMKPA 352

Query: 331 GFKCEASRETAVVIM-NHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGAL 389
           GF  EASRE+ +VI+ N ++LVE LMD  +WS +FS ++++A  LE +STG+AG+ NG+L
Sbjct: 353 GFVSEASRESGLVIIDNSVALVETLMDERRWSDMFSCMIAKATILEEVSTGIAGSRNGSL 412

Query: 390 QVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL---------RPSPAVRC 440
            +M AE QV SPLVP RE  ++R+CKQ  EG WAVVDVS+D L           +  ++C
Sbjct: 413 LLMKAELQVLSPLVPIREVIFLRFCKQLAEGAWAVVDVSIDGLMRDQNSATTSTAANLKC 472

Query: 441 RRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCE 500
           RR PSGC++Q+ P+G+ KVTWVEH E D+  VH  Y+ L+ +G AFGA RW+ATL RQCE
Sbjct: 473 RRLPSGCVMQDTPSGFCKVTWVEHTEYDEASVHQFYRPLLRSGLAFGASRWLATLQRQCE 532

Query: 501 RLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSG-TGA- 558
            LA +M+         +  + +G++SMLKLA RM  +FCAGVSAS+A  W+ L G TG+ 
Sbjct: 533 CLAILMSPPTVAASEPMAISLEGKRSMLKLARRMTDNFCAGVSASSAREWSKLDGATGSI 592

Query: 559 -DDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVV 617
            +DVRVM RKSV +PG PPG+VLSAATS W+PV P+++FDFLRDE  R+EWDILSNGG +
Sbjct: 593 GEDVRVMARKSVSEPGEPPGVVLSAATSVWVPVAPEKLFDFLRDEQLRAEWDILSNGGPM 652

Query: 618 QEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMN 677
           QEM  IA G   GN VSLLR + + SAN  QS+MLILQE+CTD + S V+YAPVDI AM 
Sbjct: 653 QEMTRIAKGHQNGNSVSLLRASAM-SAN--QSSMLILQETCTDASGSIVVYAPVDIPAMQ 709

Query: 678 VVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSL 737
           +V+ G D   VALLPSGFAILPDG S+      E  +GGSLLTVAFQILV+S PTAKL++
Sbjct: 710 LVMEGRDSTCVALLPSGFAILPDGPSI------EQKTGGSLLTVAFQILVNSQPTAKLTV 763

Query: 738 GSVATVNNLIACTVERIKASLSC 760
            SV TVNNLI+CT+++IK +L C
Sbjct: 764 ESVETVNNLISCTIKKIKTALLC 786


>gi|293331325|ref|NP_001169573.1| uncharacterized protein LOC100383453 [Zea mays]
 gi|224030161|gb|ACN34156.1| unknown [Zea mays]
          Length = 487

 Score =  758 bits (1956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/480 (78%), Positives = 422/480 (87%), Gaps = 11/480 (2%)

Query: 287 MEELIRMAQMGEPLWMT--SLDGTAAVLNEDE--YVRTFPRGIGPKPTGFKCEASRETAV 342
           MEEL+RMAQ+ EPLW     LDG+A     +E  Y R FP G+GPKP G   EASR++AV
Sbjct: 1   MEELVRMAQLDEPLWNAPAGLDGSAEEETLNEEEYARLFPGGLGPKPYGLNSEASRDSAV 60

Query: 343 VIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPL 402
           VIM H +LVEILMDVNQ++ VFS IVSRA TLEVLSTGVAGNYNGALQVM+ EFQVPSPL
Sbjct: 61  VIMTHANLVEILMDVNQYAAVFSSIVSRAATLEVLSTGVAGNYNGALQVMSVEFQVPSPL 120

Query: 403 VPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWV 462
           VPTRESY+VRYCKQ+ +GTWAVVDVSLD LRP   ++CRRRPSGCLIQEMPNGYSKVTWV
Sbjct: 121 VPTRESYFVRYCKQNADGTWAVVDVSLDGLRPGAVLKCRRRPSGCLIQEMPNGYSKVTWV 180

Query: 463 EHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQD 522
           EHVEVDDR VH++YK LVS+G AFGA+RWV TLDRQCERLASVMA+NIPT ++GVIT+ +
Sbjct: 181 EHVEVDDRSVHSIYKLLVSSGLAFGARRWVGTLDRQCERLASVMASNIPTSDIGVITSAE 240

Query: 523 GRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSA 582
           GRKSMLKLAERMV+SFC GV+AS AH WTTLSG+GA+DVRVMTRKSVDDPGRPPGIVL+A
Sbjct: 241 GRKSMLKLAERMVMSFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNA 300

Query: 583 ATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQ 642
           ATSFWLPVPPKRVFDFLRDE++RSEWDILSNGGVVQEMAHIANGRD GNCVSLLRVN   
Sbjct: 301 ATSFWLPVPPKRVFDFLRDESSRSEWDILSNGGVVQEMAHIANGRDHGNCVSLLRVN--- 357

Query: 643 SANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGT 702
           S NS+QS+MLILQESCTD + S+VIYAPVD+VAMNVVLNGGDPDYVALLPSGFAILPDG 
Sbjct: 358 STNSNQSSMLILQESCTDMSGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGP 417

Query: 703 SLHGANIGE----AASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           S   +++ +      SGGSLLTVAFQILVDSVPTAK+SLGSVATVN+LIACTVERIKA++
Sbjct: 418 SSGSSSMLQGDGGVGSGGSLLTVAFQILVDSVPTAKISLGSVATVNSLIACTVERIKAAV 477


>gi|312282947|dbj|BAJ34339.1| unnamed protein product [Thellungiella halophila]
          Length = 795

 Score =  757 bits (1954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/717 (55%), Positives = 514/717 (71%), Gaps = 35/717 (4%)

Query: 60  RLREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           R REEE +S +SGS+N EG SG+DQ+   +P +KKRYHRHT  QIQE+E+ FKECPHPD+
Sbjct: 100 RSREEEHES-RSGSDNVEGISGEDQDADDKPPRKKRYHRHTPQQIQELESMFKECPHPDE 158

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSN 177
           KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KLRA+NM  REA+ N
Sbjct: 159 KQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRN 218

Query: 178 ASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPS 237
             C NCGGP  +G++S +EHHLR+ENARL++E+DR+  +  K++G    +         +
Sbjct: 219 PICTNCGGPAMLGDVSLEEHHLRIENARLKDELDRVCNLTGKFLGHHQHH---------N 269

Query: 238 RPLELAV-----GNFGAQPGIGGGEMYGAADLLRSISAPTEAD-KPMIIELAVAAMEELI 291
             LELAV     G+F   P  GGG         +  +     D + +++ELA+ AM+EL+
Sbjct: 270 SSLELAVGTNNGGDFAFPPDFGGGGGCLPQTQQQQPTGINGIDQRSVLLELALTAMDELV 329

Query: 292 RMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLV 351
           ++A   EPLW+ SLDG    LNE+EY+RTF      KPTG   EAS+ + +VI+N ++LV
Sbjct: 330 KLAHSEEPLWVKSLDGERDELNEEEYMRTFS---STKPTGLVTEASKISGMVIINSLALV 386

Query: 352 EILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYV 411
           E LMD N+W+ +F   V+RA T +V+S G+AG  NGALQ+M AE QV SPLVP R   ++
Sbjct: 387 ETLMDSNRWTEMFPCNVARAATTDVISGGMAGTRNGALQLMNAELQVLSPLVPVRNVNFL 446

Query: 412 RYCKQHGEGTWAVVDVSLDNLRPSPAVR---CRRRPSGCLIQEMPNGYSKVTWVEHVEVD 468
           R+CKQH EG WA VDVS+D +R +  V     RR PSGC++Q+M NGYSKVTWVEH E D
Sbjct: 447 RFCKQHAEGVWAAVDVSIDTVRENSGVSPVIIRRLPSGCVVQDMSNGYSKVTWVEHAEYD 506

Query: 469 DRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSML 528
           +  +H+LY+ L+ +G  FG++RWVATL RQCE LA +M++++ + +   IT   GRKSML
Sbjct: 507 ENQIHHLYRPLIRSGLGFGSQRWVATLQRQCECLAILMSSSVTSPDNTSIT-PGGRKSML 565

Query: 529 KLAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGRPPGIVLSAATSFW 587
           KLA+RM  +FC+G+SA + H+W+ L+    D DVRVMTRKS +D     GI+LSAATS W
Sbjct: 566 KLAQRMTFNFCSGISAPSVHSWSKLTVGNVDPDVRVMTRKSGED----SGIILSAATSVW 621

Query: 588 LPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSS 647
           LP  P+R+FDFLR+E  R EWDILSNGG +QEM HIA G+D GN VSLLR N +   N++
Sbjct: 622 LPASPQRLFDFLRNERMRCEWDILSNGGPMQEMVHIAKGQDQGNSVSLLRSNPM---NAN 678

Query: 648 QSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGA 707
           QS+MLILQE+C D + + V+YAPVDI AMNVV+NGG+  YVALLPSGFAILPDG    G+
Sbjct: 679 QSSMLILQETCIDASGALVVYAPVDIPAMNVVMNGGESSYVALLPSGFAILPDGGIDGGS 738

Query: 708 NIGEA--ASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
             GE     GGSLLTVAFQILV+++PTAKL++ SV TVNNLI+CTV++I+ +L CES
Sbjct: 739 GDGEQRPVGGGSLLTVAFQILVNNLPTAKLTVESVETVNNLISCTVQKIRGALQCES 795


>gi|302757697|ref|XP_002962272.1| hypothetical protein SELMODRAFT_140884 [Selaginella moellendorffii]
 gi|109729918|tpg|DAA05773.1| TPA_inf: class IV HD-Zip protein HDZ43 [Selaginella moellendorffii]
 gi|300170931|gb|EFJ37532.1| hypothetical protein SELMODRAFT_140884 [Selaginella moellendorffii]
          Length = 745

 Score =  756 bits (1953), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/735 (53%), Positives = 514/735 (69%), Gaps = 45/735 (6%)

Query: 59  ARLREEEFDS-TKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           ++ +E+E +S + SGSEN   ASGD+QE  P +KKRYHRHT  QIQEME+ FKECPHPDD
Sbjct: 17  SKSKEDENESRSGSGSENMGNASGDEQE--PPRKKRYHRHTARQIQEMESLFKECPHPDD 74

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSN 177
           KQR+ELSRELGLEP QVKFWFQN+RTQ+K Q ER EN  LR E EKLRA+N+  REA+ N
Sbjct: 75  KQRQELSRELGLEPRQVKFWFQNRRTQLKAQQERAENNVLRHEVEKLRAENITMREAIRN 134

Query: 178 ASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPS 237
           ASCPNCGGP  + EMSF+E HLR+ENA L++E+DR+SA+AAK  G+ V   P++S   P 
Sbjct: 135 ASCPNCGGPATLREMSFEEQHLRIENACLKDELDRVSAVAAKLFGRSVP--PMVSQQAPQ 192

Query: 238 RPLELAVGNFGAQPGIGGGEMYGAADLLRSISAP---------------------TEADK 276
                +  N   Q   G   M   A +   +SAP                     ++ +K
Sbjct: 193 --FSGSSLNLSIQGAAGSNPMSPPAQVAGLLSAPPSGVEELSNSNNLSTNKSVVLSDVEK 250

Query: 277 PMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEA 336
             +++LAV AM+EL+++AQ   P+W+ S D +  VLN DEYVR FP+ +  K  GFK +A
Sbjct: 251 NSVLDLAVMAMDELVQLAQPDSPVWIPSPDASKEVLNYDEYVRQFPKFVESKQYGFKTDA 310

Query: 337 SRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEF 396
           +R+  +V+MN  SLVE+LMD  +W  +F   VS+A+TLEV+S    G+ +G LQ+M AE 
Sbjct: 311 TRDDGLVMMNAASLVEVLMDPAKWMEMFCTNVSKALTLEVISCA-PGSLSGTLQLMYAEI 369

Query: 397 QVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR--PSPA-VRCRRRPSGCLIQ--- 450
           Q  SPL+ TRE Y++RYCKQH + TWAVVDVS+D L   PSPA + CRR PSG LIQ   
Sbjct: 370 QALSPLMQTREVYFLRYCKQHQDSTWAVVDVSVDGLHGTPSPASLHCRRSPSGMLIQDMP 429

Query: 451 ----EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVM 506
               +MPNG SKV  VEH+E DD+ VH L+K LVS+G AFGA++W+ATL RQCE L   +
Sbjct: 430 DSIHDMPNGCSKVVVVEHMEYDDQPVHQLFKSLVSSGGAFGARKWLATLQRQCEALTCYL 489

Query: 507 ATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTR 566
                  E+GVI N   R+S+LKL++RM  +FCAGV A ++  WTTLSG+  DD+RVMTR
Sbjct: 490 PGLASAREIGVIPNSPARQSLLKLSQRMTTNFCAGVGAPSSQ-WTTLSGSVHDDIRVMTR 548

Query: 567 KSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANG 626
           KSVD+PG P GIVLSAAT+ WLP+ P RVFD+LR E+ RSEWD   N G+VQE+A IA G
Sbjct: 549 KSVDNPGEPHGIVLSAATTLWLPLAPARVFDYLRSEHLRSEWD---NSGMVQEVARIAKG 605

Query: 627 RDTGNCVSLLRVNCL-QSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDP 685
           + TGN VSL R++ L Q+ N++Q+ ML LQESCTD + S V+YAPV++  +N+++ GGDP
Sbjct: 606 QATGNDVSLFRIDALNQTLNANQNQMLFLQESCTDTSGSLVVYAPVELTMINMMIQGGDP 665

Query: 686 DYVALLPSGFAILPDGTSLHG-ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVN 744
            +VA+LPSGF ILPDG+  H   +I +  + G+LLTVA QIL+ ++P+AKLSL S+  +N
Sbjct: 666 AHVAVLPSGFVILPDGSEPHSTTSILQNDATGTLLTVAVQILISTLPSAKLSLDSIVAIN 725

Query: 745 NLIACTVERIKASLS 759
            LI+ TV+++K +L+
Sbjct: 726 TLISNTVQKVKGALT 740


>gi|302763529|ref|XP_002965186.1| hypothetical protein SELMODRAFT_230527 [Selaginella moellendorffii]
 gi|300167419|gb|EFJ34024.1| hypothetical protein SELMODRAFT_230527 [Selaginella moellendorffii]
          Length = 745

 Score =  756 bits (1952), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/735 (53%), Positives = 514/735 (69%), Gaps = 45/735 (6%)

Query: 59  ARLREEEFDS-TKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           ++ +E+E +S + SGSEN   ASGD+QE  P +KKRYHRHT  QIQEME+ FKECPHPDD
Sbjct: 17  SKSKEDENESRSGSGSENMGNASGDEQE--PPRKKRYHRHTARQIQEMESLFKECPHPDD 74

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSN 177
           KQR+ELSRELGLEP QVKFWFQN+RTQ+K Q ER EN  LR E EKLRA+N+  REA+ N
Sbjct: 75  KQRQELSRELGLEPRQVKFWFQNRRTQLKAQQERAENNVLRHEVEKLRAENITMREAIRN 134

Query: 178 ASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPS 237
           ASCPNCGGP  + EMSF+E HLR+ENA L++E+DR+SA+AAK  G+ V   P++S   P 
Sbjct: 135 ASCPNCGGPATLREMSFEEQHLRIENACLKDELDRVSAVAAKLFGRSVP--PMVSQQAPQ 192

Query: 238 RPLELAVGNFGAQPGIGGGEMYGAADLLRSISAP---------------------TEADK 276
                +  N   Q   G   M   A +   +SAP                     ++ +K
Sbjct: 193 --FSGSSLNLSIQGAAGSNPMSPPAQVAGLLSAPPSGVEELSNANNLNTNKSVVLSDVEK 250

Query: 277 PMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEA 336
             +++LAV AM+EL+++AQ   P+W+ S D +  VLN DEYVR FP+ +  K  GFK +A
Sbjct: 251 NSVLDLAVMAMDELVQLAQPDSPVWIPSPDASKEVLNYDEYVRQFPKFVESKQYGFKTDA 310

Query: 337 SRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEF 396
           +R+  +V+MN  SLVE+LMD  +W  +F   VS+A+TLEV+S    G+ +G LQ+M AE 
Sbjct: 311 TRDDGLVMMNAASLVEVLMDPAKWMEMFCTNVSKALTLEVISCA-PGSLSGTLQLMYAEI 369

Query: 397 QVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR--PSPA-VRCRRRPSGCLIQ--- 450
           Q  SPL+ TRE Y++RYCKQH + TWAVVDVS+D L   PSPA + CRR PSG LIQ   
Sbjct: 370 QALSPLMQTREVYFLRYCKQHQDSTWAVVDVSVDGLHGTPSPASLHCRRSPSGMLIQDMP 429

Query: 451 ----EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVM 506
               +MPNG SKV  VEH+E DD+ VH L+K LVS+G AFGA++W+ATL RQCE L   +
Sbjct: 430 DSIHDMPNGCSKVVVVEHMEYDDQPVHQLFKSLVSSGGAFGARKWLATLQRQCEALTCYL 489

Query: 507 ATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTR 566
                  E+GVI N   R+S+LKL++RM  +FCAGV A ++  WTTLSG+  DD+RVMTR
Sbjct: 490 PGLASAREIGVIPNSPARQSLLKLSQRMTTNFCAGVGAPSSQ-WTTLSGSVHDDIRVMTR 548

Query: 567 KSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANG 626
           KSVD+PG P GIVLSAAT+ WLP+ P RVFD+LR E+ RSEWD   N G+VQE+A IA G
Sbjct: 549 KSVDNPGEPHGIVLSAATTLWLPLAPARVFDYLRSEHLRSEWD---NSGMVQEVARIAKG 605

Query: 627 RDTGNCVSLLRVNCL-QSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDP 685
           + TGN VSL R++ L Q+ N++Q+ ML LQESCTD + S V+YAPV++  +N+++ GGDP
Sbjct: 606 QATGNDVSLFRIDALNQTLNANQNQMLFLQESCTDASGSLVVYAPVELTMINMMIQGGDP 665

Query: 686 DYVALLPSGFAILPDGTSLHG-ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVN 744
            +VA+LPSGF ILPDG+  H   +I +  + G+LLTVA QIL+ ++P+AKLSL S+  +N
Sbjct: 666 AHVAVLPSGFVILPDGSEPHSTTSILQNDATGTLLTVAVQILISTLPSAKLSLDSIVAIN 725

Query: 745 NLIACTVERIKASLS 759
            LI+ TV+++K +L+
Sbjct: 726 TLISNTVQKVKGALT 740


>gi|297817426|ref|XP_002876596.1| hypothetical protein ARALYDRAFT_324546 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322434|gb|EFH52855.1| hypothetical protein ARALYDRAFT_324546 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 811

 Score =  754 bits (1947), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/776 (50%), Positives = 516/776 (66%), Gaps = 57/776 (7%)

Query: 27  SSSGLTLSQPTN---MMEGQLHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDD 83
           SSSGL+L   TN      G++   ++T+ +S  E    R E        S+N E  SGDD
Sbjct: 52  SSSGLSLGLQTNGEMSRNGEIFESNVTRKSSRGEDVESRSE--------SDNAEAVSGDD 103

Query: 84  QE--QRP-NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
            +   RP  KKKRYHRHT  QIQ++E+ FKEC HPD+KQR +LSR L L+P QVKFWFQN
Sbjct: 104 LDTSDRPLKKKKRYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRLNLDPRQVKFWFQN 163

Query: 141 KRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLR 200
           +RTQMKTQ ERHEN  LR EN+KLRA+NM  REA+ N  C NCGGP  IGE+S +E HLR
Sbjct: 164 RRTQMKTQIERHENALLRQENDKLRAENMSVREAMRNPMCGNCGGPAVIGEISMEEQHLR 223

Query: 201 LENARLREEIDRISAIAAKYVGKP---------------------VVNYPLLSPPVPSRP 239
           +EN+RL++E+DR+ A+  K++G+                         + L SP +P   
Sbjct: 224 IENSRLKDELDRVCALTGKFLGRSNGSHHIPDSALVLGVGVGCNVGGGFTLSSPVLPQAS 283

Query: 240 LELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEP 299
               + N       G G +    +  + +S      +   ++LA+A+M+EL++MAQ  +P
Sbjct: 284 PRFEISN-----ATGSG-LVATVNRQQPVSVSDFDQRSRYLDLALASMDELVKMAQTRDP 337

Query: 300 LWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQ 359
           LW+ S D    +LN++EY  +F R +GPKP G+  EAS+E   VI+N ++LVE LMD  +
Sbjct: 338 LWVRSSDTGFEMLNQEEYDTSFTRCVGPKPDGYVSEASKEAGTVIINSLALVETLMDSER 397

Query: 360 WSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGE 419
           W+ +F  ++SR  T E++S+G+ G+ NGAL +M AE Q+ SPLVP R+  ++R+CKQH E
Sbjct: 398 WAEMFPSMISRTSTTEIISSGMGGSRNGALHLMHAELQLLSPLVPVRQVSFLRFCKQHAE 457

Query: 420 GTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQL 479
           G WAVVDVS+D++R   +  CRR PSGCL+Q+M NG SKVTW+EH E D+  +H LY+ L
Sbjct: 458 GVWAVVDVSIDSIREGSSSSCRRLPSGCLVQDMANGCSKVTWIEHTEYDENRIHRLYRPL 517

Query: 480 VSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFC 539
           +S G AFGA RW+A L RQCE L  +M++ +         N +GRKSMLKLA+RM  +FC
Sbjct: 518 LSCGLAFGAHRWMAALQRQCECLTILMSSTVSPSPNPTPINCNGRKSMLKLAKRMTDNFC 577

Query: 540 AGVSASTAHTWTTLS-GTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDF 598
            GV AS+   W+ L+ G   +DVR+MTRKSV++PG PPGI+L+AATS W+P+ P+R+FDF
Sbjct: 578 GGVCASSLQKWSKLNVGNVDEDVRIMTRKSVNNPGEPPGIILNAATSVWMPISPRRLFDF 637

Query: 599 LRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESC 658
           L +E  RSEWDILSNGG ++EMAHIA G D  N VSLLR + +   N++QS+MLILQE+ 
Sbjct: 638 LGNERLRSEWDILSNGGPMKEMAHIAKGHDHSNSVSLLRASAI---NANQSSMLILQETS 694

Query: 659 TDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPD---GTSLHGANIGEAAS- 714
            D   + V+YAPVDI AM  V+NGGD  YVALLPSGFAILP+   GT    A    A   
Sbjct: 695 IDAAGALVVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILPNAQAGTQRCAAEERNANGN 754

Query: 715 --------GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
                   GGSLLTVAFQILV+S+PTAKL++ SV TVNNLI+CTV++IKA+L C+S
Sbjct: 755 GNGGCMEEGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCDS 810


>gi|449479674|ref|XP_004155671.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
          Length = 549

 Score =  754 bits (1946), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/545 (69%), Positives = 438/545 (80%), Gaps = 10/545 (1%)

Query: 220 YVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMI 279
           Y  K    Y  L    P+R L+L + NFG Q     GEMYGAAD  RSIS P+E +KP+I
Sbjct: 4   YGSKCTKPYYQLPTNAPTRSLDLGITNFGPQSSGFVGEMYGAADFFRSISRPSEGEKPVI 63

Query: 280 IELAVAAMEELIRMAQMGEPLWMTSLDGTAA---VLNEDEYVRTFPRGIGPKPTGFKCEA 336
           +ELAV+ MEEL RMAQ GEPLW+   DG ++   VLNE EY+R+F  GI  KP GF+ EA
Sbjct: 64  VELAVSGMEELRRMAQGGEPLWVAG-DGKSSGEVVLNEAEYLRSFGGGIVGKPMGFRTEA 122

Query: 337 SRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEF 396
           SR +AVV MNH+ LV+I MD  QWSTVF GIVSRA T+E+LS G+ GN+NGAL VM+AEF
Sbjct: 123 SRVSAVVFMNHMKLVDIFMDATQWSTVFCGIVSRASTVEILSPGLPGNFNGALHVMSAEF 182

Query: 397 QVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGY 456
           QVPSPLVPTRE+Y+VRYCKQ  +G+WAV DVSLD LRPSP    RR+PSGCLIQE+PNGY
Sbjct: 183 QVPSPLVPTRENYFVRYCKQQTDGSWAVADVSLDTLRPSPIPNTRRKPSGCLIQELPNGY 242

Query: 457 SKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVG 516
           SK+TWVEHVEVD+ GV  +Y+ LV++G AFGAKRWVATLDRQ ER A+ +AT IPTG++ 
Sbjct: 243 SKITWVEHVEVDETGVPTMYRTLVNSGLAFGAKRWVATLDRQSERFATSIATTIPTGDLR 302

Query: 517 VITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPP 576
           VI++ +GRKSMLKLAERMV SFCAGV AS+ H WT L     D+VRV+TRKS D+PGRPP
Sbjct: 303 VISSIEGRKSMLKLAERMVTSFCAGVGASSVHAWTALPAAAGDEVRVVTRKSTDEPGRPP 362

Query: 577 GIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLL 636
           G+VLSAATSFW+PV PK VFDFLR E +RSEWDILSNGG+VQEMAHIANGR +GNCVSLL
Sbjct: 363 GVVLSAATSFWIPVSPKVVFDFLRKEKSRSEWDILSNGGLVQEMAHIANGRHSGNCVSLL 422

Query: 637 RVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFA 696
           RVN   SANSSQSNMLILQESCTD T S+VIYAPVD VAMNVVL+G DPDYVALLPSGFA
Sbjct: 423 RVN---SANSSQSNMLILQESCTDSTGSYVIYAPVDTVAMNVVLSGCDPDYVALLPSGFA 479

Query: 697 ILPD---GTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVER 753
           ILPD   G   +G  I E  SGGSL+TVAFQILVDSVPTA+LS+GSVATVN+LI CTVER
Sbjct: 480 ILPDGPGGGGNNGGGILELGSGGSLITVAFQILVDSVPTARLSIGSVATVNSLIKCTVER 539

Query: 754 IKASL 758
           I+A++
Sbjct: 540 IRAAV 544


>gi|77378038|gb|ABA70760.1| baby boom interacting protein 2 [Brassica napus]
          Length = 697

 Score =  744 bits (1921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/694 (53%), Positives = 481/694 (69%), Gaps = 26/694 (3%)

Query: 88  PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
           P KKKRYHRHT  QIQ++E+ FKEC HPD+KQR +LSR+L L+P QVKFWFQN+RTQMKT
Sbjct: 10  PRKKKRYHRHTAKQIQDLESVFKECAHPDEKQRLDLSRKLNLDPRQVKFWFQNRRTQMKT 69

Query: 148 QHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLR 207
           Q ERHEN  LR EN+KLRA+NM  REA+ N  C NCGGP  +GE+S +E HLR+EN+RL+
Sbjct: 70  QIERHENALLRQENDKLRAENMSVREAMRNPMCSNCGGPAVLGEVSMEEQHLRIENSRLK 129

Query: 208 EEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFG-------------AQPGIG 254
           +E+DR+ A+  K++G+        S  VP   L L VG                A P   
Sbjct: 130 DELDRVCALTGKFLGRSTSG----SHHVPDSSLVLGVGVGSGGGFSLSSPSLPQASPRFE 185

Query: 255 GGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNE 314
                G A + R         +   ++LA+AAMEEL++MAQ  EPLW+ S +    +LN+
Sbjct: 186 ISNGTGLATVNRQRPVSDFDQRSRYLDLALAAMEELVKMAQRHEPLWVRSSETGFEMLNK 245

Query: 315 DEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTL 374
           +EY  +F R +GPK  GF  EAS+ET  VI+N ++LVE LMD  +W+ +F  ++SR  T 
Sbjct: 246 EEYDTSFSRVVGPKQDGFVSEASKETGNVIINSLALVETLMDSERWAEMFPSMISRTSTT 305

Query: 375 EVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP 434
           E++S+G+ G  NGAL +M AE Q+ SPLVP R+  ++R+CKQH EG WAVVDVS+D++R 
Sbjct: 306 EIISSGMGGTRNGALHLMHAELQLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIRE 365

Query: 435 SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVAT 494
             +  CRR PSGCL+Q+M NGYSKVTW+EH E D+  +H LY+ L+S G AFGA+RW+A 
Sbjct: 366 GSSSSCRRLPSGCLVQDMANGYSKVTWIEHTEYDETRIHRLYRPLLSCGLAFGAQRWMAA 425

Query: 495 LDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLS 554
           L RQCE L  +M++ +         + +GRKSMLKLA+RM  +FC GV AS+   W+ L+
Sbjct: 426 LQRQCECLTILMSSTVSPSRSPTPISCNGRKSMLKLAKRMTDNFCGGVCASSLQKWSKLN 485

Query: 555 -GTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSN 613
            G   +DVR+MTRKSV+DPG PPGIVL+AATS W+PV PKR+FDFL +E  RSEWDILSN
Sbjct: 486 VGNVDEDVRIMTRKSVNDPGEPPGIVLNAATSVWMPVSPKRLFDFLGNERLRSEWDILSN 545

Query: 614 GGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDI 673
           GG +QEMAHIA G D  N VSLLR   +   N++QS+MLILQE+  D   + V+YAPVDI
Sbjct: 546 GGPMQEMAHIAKGHDHSNSVSLLRATAI---NANQSSMLILQETSIDAVGAVVVYAPVDI 602

Query: 674 VAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAA-----SGGSLLTVAFQILVD 728
            AM  V+NGGD  YVALLPSGFAILP          G  +      GGSLLTVAFQILV+
Sbjct: 603 PAMQAVMNGGDSAYVALLPSGFAILPSAPQRSEERNGNGSGGCMEEGGSLLTVAFQILVN 662

Query: 729 SVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           S+PTAKL++ SV TVNNLI+CTV++IKA+L C+S
Sbjct: 663 SLPTAKLTVESVETVNNLISCTVQKIKAALHCDS 696


>gi|115447877|ref|NP_001047718.1| Os02g0674800 [Oryza sativa Japonica Group]
 gi|75121322|sp|Q6EPF0.1|ROC5_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC5; AltName:
           Full=GLABRA 2-like homeobox protein 5; AltName:
           Full=HD-ZIP protein ROC5; AltName: Full=Homeodomain
           transcription factor ROC5; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 5
 gi|50253214|dbj|BAD29470.1| GL2-type homeobox genes [Oryza sativa Japonica Group]
 gi|113537249|dbj|BAF09632.1| Os02g0674800 [Oryza sativa Japonica Group]
 gi|222623431|gb|EEE57563.1| hypothetical protein OsJ_07908 [Oryza sativa Japonica Group]
          Length = 804

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/755 (52%), Positives = 531/755 (70%), Gaps = 50/755 (6%)

Query: 49  MTQNTSESEIARLREEEFDS-TKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEA 107
           MT++T     +R   +  D+ + +G ++ E A   +  +R   KKRYHRHT  QIQE+EA
Sbjct: 59  MTRDTEAENDSRSGSDHLDAISAAGEDDVEDAEPSNSRKR---KKRYHRHTPQQIQELEA 115

Query: 108 FFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRAD 167
            FKECPHPD+KQR ELSR L L+  QVKFWFQN+RTQMKTQ ERHEN  L+ EN+KLRA+
Sbjct: 116 LFKECPHPDEKQRAELSRRLSLDARQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAE 175

Query: 168 NMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGK---- 223
           NM  REA+ +  C +CG P  +GE+S +E HLR+ENARL++E++R+ A+A K++GK    
Sbjct: 176 NMTIREAMRSPMCGSCGSPAMLGEVSLEEQHLRIENARLKDELNRVCALATKFLGKPISL 235

Query: 224 ---PVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMY------GAADLLRSISAPTEA 274
              P +  P LS P+P+  LELA+G  G    +G           G +  + ++  P  A
Sbjct: 236 LSPPPLLQPHLSLPMPNSSLELAIGGIGGLGSLGTLPGCMNEFAGGVSSPMGTVITPARA 295

Query: 275 ------------DKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAA--VLNEDEYVRT 320
                       D+ + +ELA++AM+EL++MAQM +PLW+ +L G+ +  VLN +EY+ +
Sbjct: 296 TGAAIPSLVGNIDRSVFLELAISAMDELVKMAQMDDPLWVPALPGSPSKEVLNFEEYLHS 355

Query: 321 FPRGIGPKPTGFKCEASRETAVVIM-NHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           F   IG KP G+  EASRE+ +VI+ N ++LVE LMD  +WS +FS ++++A  LE +ST
Sbjct: 356 FLPCIGMKPAGYVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEVST 415

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL------- 432
           G+AG+ NGAL +M AE QV SPLVP RE  ++R+CKQ  EG WAVVDVS+D L       
Sbjct: 416 GIAGSRNGALLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSG 475

Query: 433 -RPSPA-VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKR 490
             P+   V+CRR PSGC++Q+ PNGY KVTWVEH E D+  VH LY+ L+ +G AFGA+R
Sbjct: 476 TAPTGGNVKCRRVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARR 535

Query: 491 WVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTW 550
           W+ATL RQCE LA +M++   T       +Q+G++SMLKLA RM  +FCAGVSAS+A  W
Sbjct: 536 WLATLQRQCECLAILMSSATVTANDSTAISQEGKRSMLKLARRMTENFCAGVSASSAREW 595

Query: 551 TTLSG-TGA--DDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           + L G TG+  +DVRVM RKSV +PG PPG+VLSAATS W+PV P+++F+FLRDE  R+E
Sbjct: 596 SKLDGATGSIGEDVRVMARKSVSEPGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRAE 655

Query: 608 WDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVI 667
           WDILSNGG +QEM  IA G+  GN VSLLR + + SAN  QS+MLILQE+CTD + S V+
Sbjct: 656 WDILSNGGPMQEMTQIAKGQRDGNSVSLLRASAV-SAN--QSSMLILQETCTDASGSIVV 712

Query: 668 YAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILV 727
           YAPVDI AM +V+NGGD  YVALLPSGFAILPDG  + GA   E  +GGSLLTVAFQILV
Sbjct: 713 YAPVDIPAMQLVMNGGDSTYVALLPSGFAILPDGPRI-GATGYE--TGGSLLTVAFQILV 769

Query: 728 DSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           ++ PTAKL++ SV TVNNLI+CT+++IK +L C++
Sbjct: 770 NNQPTAKLTVESVETVNNLISCTIKKIKTALQCDA 804


>gi|218191344|gb|EEC73771.1| hypothetical protein OsI_08446 [Oryza sativa Indica Group]
          Length = 804

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/755 (52%), Positives = 531/755 (70%), Gaps = 50/755 (6%)

Query: 49  MTQNTSESEIARLREEEFDS-TKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEA 107
           MT++T     +R   +  D+ + +G ++ E A   +  +R   KKRYHRHT  QIQE+EA
Sbjct: 59  MTRDTEAENDSRSGSDHLDAISAAGEDDVEDAEPSNSRKR---KKRYHRHTPQQIQELEA 115

Query: 108 FFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRAD 167
            FKECPHPD+KQR ELSR L L+  QVKFWFQN+RTQMKTQ ERHEN  L+ EN+KLRA+
Sbjct: 116 LFKECPHPDEKQRAELSRRLSLDARQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAE 175

Query: 168 NMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGK---- 223
           NM  REA+ +  C +CG P  +GE+S +E HLR+ENARL++E++R+ A+A K++GK    
Sbjct: 176 NMTIREAMRSPMCGSCGSPAMLGEVSLEEQHLRIENARLKDELNRVCALATKFLGKPISL 235

Query: 224 ---PVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMY------GAADLLRSISAPTEA 274
              P +  P LS P+P+  LELA+G  G    +G           G +  + ++  P  A
Sbjct: 236 LSPPPLLQPHLSLPMPNSSLELAIGGIGGLGSLGTLPGCMNEFAGGVSSPMGTVITPARA 295

Query: 275 ------------DKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAA--VLNEDEYVRT 320
                       D+ + +ELA++AM+EL++MAQM +PLW+ +L G+ +  VLN +EY+ +
Sbjct: 296 TGAAIPSLVGNIDRSVFLELAISAMDELVKMAQMDDPLWVPALPGSPSKEVLNFEEYLHS 355

Query: 321 FPRGIGPKPTGFKCEASRETAVVIM-NHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           F   IG KP G+  EASRE+ +VI+ N ++LVE LMD  +WS +FS ++++A  LE +ST
Sbjct: 356 FLPCIGMKPAGYVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEVST 415

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL------- 432
           G+AG+ NGAL +M AE QV SPLVP RE  ++R+CKQ  EG WAVVDVS+D L       
Sbjct: 416 GIAGSRNGALLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSG 475

Query: 433 -RPSPA-VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKR 490
             P+   V+CRR PSGC++Q+ PNGY KVTWVEH E D+  VH LY+ L+ +G AFGA+R
Sbjct: 476 TAPTGGNVKCRRVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARR 535

Query: 491 WVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTW 550
           W+ATL RQCE LA +M++   T       +Q+G++SMLKLA RM  +FCAGVSAS+A  W
Sbjct: 536 WLATLQRQCECLAILMSSATVTANDSTAISQEGKRSMLKLARRMTENFCAGVSASSAREW 595

Query: 551 TTLSG-TGA--DDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           + L G TG+  +DVRVM RKSV +PG PPG+VLSAATS W+PV P+++F+FLRDE  R+E
Sbjct: 596 SKLDGATGSIGEDVRVMARKSVSEPGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRAE 655

Query: 608 WDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVI 667
           WDILSNGG +QEM  IA G+  GN VSLLR + + SAN  QS+MLILQE+CTD + S V+
Sbjct: 656 WDILSNGGPMQEMTQIAKGQRDGNSVSLLRASAV-SAN--QSSMLILQETCTDASGSIVV 712

Query: 668 YAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILV 727
           YAPVDI AM +V+NGGD  YVALLPSGFAILPDG  + GA   E  +GGSLLTVAFQILV
Sbjct: 713 YAPVDIPAMQLVMNGGDSTYVALLPSGFAILPDGPRI-GATGYE--TGGSLLTVAFQILV 769

Query: 728 DSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           ++ PTAKL++ SV TVNNLI+CT+++IK +L C++
Sbjct: 770 NNQPTAKLTVESVETVNNLISCTIKKIKTALQCDA 804


>gi|31339103|dbj|BAC77158.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 790

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/755 (52%), Positives = 531/755 (70%), Gaps = 50/755 (6%)

Query: 49  MTQNTSESEIARLREEEFDS-TKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEA 107
           MT++T     +R   +  D+ + +G ++ E A   +  +R   KKRYHRHT  QIQE+EA
Sbjct: 45  MTRDTEAENDSRSGSDHLDAISAAGEDDVEDAEPSNSRKR---KKRYHRHTPQQIQELEA 101

Query: 108 FFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRAD 167
            FKECPHPD+KQR ELSR L L+  QVKFWFQN+RTQMKTQ ERHEN  L+ EN+KLRA+
Sbjct: 102 LFKECPHPDEKQRAELSRRLSLDARQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAE 161

Query: 168 NMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGK---- 223
           NM  REA+ +  C +CG P  +GE+S +E HLR+ENARL++E++R+ A+A K++GK    
Sbjct: 162 NMTIREAMRSPMCGSCGSPAMLGEVSLEEQHLRIENARLKDELNRVCALATKFLGKPISL 221

Query: 224 ---PVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMY------GAADLLRSISAPTEA 274
              P +  P LS P+P+  LELA+G  G    +G           G +  + ++  P  A
Sbjct: 222 LSPPPLLQPHLSLPMPNSSLELAIGGIGGLGSLGTLPGCMNEFAGGVSSPMGTVITPARA 281

Query: 275 ------------DKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAA--VLNEDEYVRT 320
                       D+ + +ELA++AM+EL++MAQM +PLW+ +L G+ +  VLN +EY+ +
Sbjct: 282 TGAAIPSLVGNIDRSVFLELAISAMDELVKMAQMDDPLWVPALPGSPSKEVLNFEEYLHS 341

Query: 321 FPRGIGPKPTGFKCEASRETAVVIM-NHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           F   IG KP G+  EASRE+ +VI+ N ++LVE LMD  +WS +FS ++++A  LE +ST
Sbjct: 342 FLPCIGMKPAGYVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEVST 401

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL------- 432
           G+AG+ NGAL +M AE QV SPLVP RE  ++R+CKQ  EG WAVVDVS+D L       
Sbjct: 402 GIAGSRNGALLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSG 461

Query: 433 -RPSPA-VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKR 490
             P+   V+CRR PSGC++Q+ PNGY KVTWVEH E D+  VH LY+ L+ +G AFGA+R
Sbjct: 462 TAPTGGNVKCRRVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARR 521

Query: 491 WVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTW 550
           W+ATL RQCE LA +M++   T       +Q+G++SMLKLA RM  +FCAGVSAS+A  W
Sbjct: 522 WLATLQRQCECLAILMSSATVTANDSTAISQEGKRSMLKLARRMTENFCAGVSASSAREW 581

Query: 551 TTLSG-TGA--DDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           + L G TG+  +DVRVM RKSV +PG PPG+VLSAATS W+PV P+++F+FLRDE  R+E
Sbjct: 582 SKLDGATGSIGEDVRVMARKSVSEPGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRAE 641

Query: 608 WDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVI 667
           WDILSNGG +QEM  IA G+  GN VSLLR + + SAN  QS+MLILQE+CTD + S V+
Sbjct: 642 WDILSNGGPMQEMTQIAKGQRDGNSVSLLRASAV-SAN--QSSMLILQETCTDASGSIVV 698

Query: 668 YAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILV 727
           YAPVDI AM +V+NGGD  YVALLPSGFAILPDG  + GA   E  +GGSLLTVAFQILV
Sbjct: 699 YAPVDIPAMQLVMNGGDSTYVALLPSGFAILPDGPRI-GATGYE--TGGSLLTVAFQILV 755

Query: 728 DSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           ++ PTAKL++ SV TVNNLI+CT+++IK +L C++
Sbjct: 756 NNQPTAKLTVESVETVNNLISCTIKKIKTALQCDA 790


>gi|449446049|ref|XP_004140784.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
          Length = 783

 Score =  739 bits (1907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/738 (52%), Positives = 517/738 (70%), Gaps = 45/738 (6%)

Query: 58  IARLREEEFDSTKSGSENHEGA-SGDDQE---QRPNKKKRYHRHTQHQIQEMEAFFKECP 113
           I R+RE+E+DS +SGS+N +GA SGDD +   ++P K+K+YHRHT HQIQE+E FFKECP
Sbjct: 51  IVRIREDEYDS-RSGSDNIDGAVSGDDHDANDEQPPKRKKYHRHTPHQIQELEIFFKECP 109

Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYRE 173
           HPDDKQR ELSR LGLE  QVKFWFQN+RTQMKTQ ERHEN  L+ EN+KLRA+N   ++
Sbjct: 110 HPDDKQRNELSRRLGLETKQVKFWFQNRRTQMKTQIERHENAILKQENDKLRAENSVMKD 169

Query: 174 ALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLL-S 232
           A+SN +C  CGGP+    +SF+EH LR+ENARLREE+ R+ A+  K++G PVV +    S
Sbjct: 170 AISNPTCSTCGGPSIPVHLSFEEHQLRIENARLREELHRLYAVTNKFLGWPVVPFANHGS 229

Query: 233 PPVPSRPLELAVGNFGAQPG--------IG---GGEMYGAADLLRSISAP--------TE 273
            P     LEL+VG  G  PG        +G   G E++ A  ++  IS P          
Sbjct: 230 SPSSDSCLELSVGRNG--PGNLSTVSDSMGLNLGNELFSAGSVM-PISKPDIGMLTNDIP 286

Query: 274 ADKPMIIELAVAAMEELIRMAQMGEPLWMTS-LDGTAAVLNEDEYVRTFPRGIGPKPTGF 332
            ++ + ++LA+AAM EL++MAQM  PLW+ S  D     LN DEY RTFP   G K T +
Sbjct: 287 LERTIYVDLALAAMNELVKMAQMDGPLWIRSRADSGKETLNLDEYSRTFPSSAGMKHTNW 346

Query: 333 KCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVM 392
             EA+R+T +VI+N ++LVE LMD N+W+ +F  +++RA T +V+S+G+ G  NGALQ+M
Sbjct: 347 TTEATRDTTMVIINSLALVETLMDANRWAEMFPCLIARATTTDVISSGMGGTRNGALQLM 406

Query: 393 TAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVR-CRRRPSGCLIQE 451
            AE +V SPLVP R   ++R+CKQH +G WAVVDVS+     S +   C+R PSGC++Q+
Sbjct: 407 HAELRVLSPLVPVRTLKFLRFCKQHADGLWAVVDVSIGEGSNSNSFSGCKRLPSGCVVQD 466

Query: 452 MPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIP 511
           MPNG+SKVTWVEH E D+  +H LY+QL+S+G+ FG++RW+ATL RQC+ LA +M++ IP
Sbjct: 467 MPNGFSKVTWVEHTEYDETVIHQLYRQLISSGSGFGSQRWLATLQRQCDCLAILMSSTIP 526

Query: 512 TGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTL-SGTGADDVRVMTRKSVD 570
           T +   I+   GR+SMLKL++RMV +FC+GV +ST H W  L  G  ++DV+VM RKS++
Sbjct: 527 TEDPAGIS-PSGRRSMLKLSQRMVDNFCSGVCSSTLHKWDKLVVGNISEDVKVMARKSIN 585

Query: 571 DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTG 630
           DPG PPGIVLSAATS W+PV  +R+F FL+DE  RSEWDILSN   + EM  I+  +   
Sbjct: 586 DPGEPPGIVLSAATSVWMPVTQQRLFAFLQDECLRSEWDILSNSRPMLEMLRISKSQGPD 645

Query: 631 NCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVAL 690
           N VSLL   C    N++++ M ILQE+ TD + S V++APVD  ++N+V+ GGD  YV+L
Sbjct: 646 NRVSLL---CANPMNANENTMFILQETWTDVSGSLVVFAPVDTSSVNLVMRGGDSAYVSL 702

Query: 691 LPSGFAILPDGTSLHGANIGEAAS----------GGSLLTVAFQILVDSVPTAKLSLGSV 740
           LPSGFAILP   S +    GE A+          G  LLTVAFQILV+S+PTAKL++ SV
Sbjct: 703 LPSGFAILPIDQSNYACTNGEDATVKSSINSGHGGACLLTVAFQILVNSLPTAKLTVESV 762

Query: 741 ATVNNLIACTVERIKASL 758
            TVN+LI+CT+++IKA+L
Sbjct: 763 ETVNHLISCTIQKIKAAL 780


>gi|449485525|ref|XP_004157198.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
          Length = 783

 Score =  737 bits (1903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/738 (51%), Positives = 516/738 (69%), Gaps = 45/738 (6%)

Query: 58  IARLREEEFDSTKSGSENHEGA-SGDDQE---QRPNKKKRYHRHTQHQIQEMEAFFKECP 113
           I R+RE+E+DS +SGS+N +GA SGDD +   ++P K+K+YHRHT HQIQE+E FFKECP
Sbjct: 51  IVRIREDEYDS-RSGSDNIDGAVSGDDHDANDEQPPKRKKYHRHTPHQIQELEIFFKECP 109

Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYRE 173
           HPDDKQR ELSR LGLE  QVKFWFQN+RTQMKTQ ERHEN  L+ EN+KLRA+N   ++
Sbjct: 110 HPDDKQRNELSRRLGLETKQVKFWFQNRRTQMKTQIERHENAILKQENDKLRAENSVMKD 169

Query: 174 ALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLL-S 232
           A+SN +C  CGGP+    +SF+EH LR+ENARLREE+ R+ A+  K++G PVV +    S
Sbjct: 170 AISNPTCSTCGGPSIPVHLSFEEHQLRIENARLREELHRLYAVTNKFLGWPVVPFANHGS 229

Query: 233 PPVPSRPLELAVGNFGAQPG--------IG---GGEMYGAADLLRSISAP--------TE 273
            P     LEL+VG  G  PG        +G   G E++ A  ++  IS P          
Sbjct: 230 SPSSDSCLELSVGRNG--PGNLSTVSDSMGLNLGNELFSAGSVM-PISKPDIGMLTNDIP 286

Query: 274 ADKPMIIELAVAAMEELIRMAQMGEPLWMTS-LDGTAAVLNEDEYVRTFPRGIGPKPTGF 332
            ++ + ++LA+AAM EL++MAQM  PLW+ S  D     LN DEY RTFP   G K T +
Sbjct: 287 LERTIYVDLALAAMNELVKMAQMDGPLWIRSRADSGKETLNLDEYSRTFPSSAGMKHTNW 346

Query: 333 KCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVM 392
             EA+R+T +VI+N ++LVE LMD N+W+ +F  +++RA T +V+S+G+ G  NGALQ+M
Sbjct: 347 TTEATRDTTMVIINSLALVETLMDANRWAEMFPCLIARATTTDVISSGMGGTRNGALQLM 406

Query: 393 TAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVR-CRRRPSGCLIQE 451
            AE +V SPLVP R   ++R+CKQH +G WAVVDVS+     S +   C+R PSGC++Q+
Sbjct: 407 HAELRVLSPLVPVRTLKFLRFCKQHADGLWAVVDVSIGEGSNSNSFSGCKRLPSGCVVQD 466

Query: 452 MPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIP 511
           MPNG+SKVTWVEH E D+  +H LY+QL+S+G+ FG++RW+ATL RQC+ LA +M++ IP
Sbjct: 467 MPNGFSKVTWVEHTEYDETVIHQLYRQLISSGSGFGSQRWLATLQRQCDCLAILMSSTIP 526

Query: 512 TGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTL-SGTGADDVRVMTRKSVD 570
           T +   I+   GR+SMLKL++RMV +FC+GV +ST H W  L  G  ++DV+VM RKS++
Sbjct: 527 TEDPAGIS-PSGRRSMLKLSQRMVDNFCSGVCSSTLHKWDKLVVGNISEDVKVMARKSIN 585

Query: 571 DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTG 630
           DPG PPGIVLSAATS W+PV  +R+F FL+DE  RSEWDILSN   + EM  I+  +   
Sbjct: 586 DPGEPPGIVLSAATSVWMPVTQQRLFAFLQDECLRSEWDILSNSRPMLEMLRISKSQGPD 645

Query: 631 NCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVAL 690
           N VSLL   C    N++++ M ILQE+ TD + S V++APVD  ++N+V+ GGD  YV+L
Sbjct: 646 NRVSLL---CANPMNANENTMFILQETWTDVSGSLVVFAPVDTSSVNLVMRGGDSAYVSL 702

Query: 691 LPSGFAILPDGTSLHGANIGEAAS----------GGSLLTVAFQILVDSVPTAKLSLGSV 740
           LPSGFAILP   S +    GE A+          G  LLTVAFQILV+S+PTAKL++ SV
Sbjct: 703 LPSGFAILPIDQSNYACTNGEDATVKSSINSGHGGACLLTVAFQILVNSLPTAKLTVESV 762

Query: 741 ATVNNLIACTVERIKASL 758
            TVN+LI+CT+++IK +L
Sbjct: 763 ETVNHLISCTIQKIKTAL 780


>gi|147856728|emb|CAN83483.1| hypothetical protein VITISV_009450 [Vitis vinifera]
          Length = 717

 Score =  731 bits (1886), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/700 (54%), Positives = 487/700 (69%), Gaps = 36/700 (5%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +KKRYHRHT HQIQ +E  FKECPHPD+KQR +LSREL L P Q+KFWFQN+RTQMK QH
Sbjct: 28  RKKRYHRHTAHQIQRLEGMFKECPHPDEKQRLQLSRELALAPRQIKFWFQNRRTQMKAQH 87

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMS-FDEHHLRLENARLRE 208
           ER +N  LR EN+K+R +N+  REAL N  CP+CGGP  IGE S FDE  LR+ENA+L+E
Sbjct: 88  ERADNCALRVENDKIRCENIAIREALKNVICPSCGGP-PIGEDSYFDEQKLRVENAQLKE 146

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           E+DR+S+IAAKY+G+P+   P +  PV    L+L++G+FG Q G+G G      DLL   
Sbjct: 147 ELDRVSSIAAKYIGRPISQLPPVQ-PVHISSLDLSMGSFGGQ-GMGSGPSLD-LDLLPGS 203

Query: 269 SAP-----------TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEY 317
           S+            ++ DK ++ ++A  A++EL+R+ Q  EPLWM S      VLN + Y
Sbjct: 204 SSAMPILPFQGTGISDMDKSLMADVAGNALDELLRLLQTNEPLWMKSTTDGRDVLNLESY 263

Query: 318 VRTFPRGIGP-KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEV 376
            R FPR     K    + EASR++ VVIMN ++LV+I MD N+W  +F  IVS A TLEV
Sbjct: 264 ERIFPRANSHLKNPNVRIEASRDSGVVIMNSLALVDIFMDSNKWMELFPTIVSMARTLEV 323

Query: 377 LSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP-- 434
           LS+G+ G  +G+LQ+M  E QV S LVPTRE Y++RYC+Q  +G+WA+VDVS D  R   
Sbjct: 324 LSSGMMGGQSGSLQLMYGELQVLSXLVPTREFYFLRYCQQIEQGSWAIVDVSYDFPRDNQ 383

Query: 435 -SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLYKQLVSTGNAFGAKRWV 492
            +P     R PSGCLIQ+MPNGYSKVTWVEHVE++D+   H LY+ L+  G AFGA+RW+
Sbjct: 384 FAPQNPSHRLPSGCLIQDMPNGYSKVTWVEHVEIEDKTPTHRLYRDLIHRGLAFGAERWL 443

Query: 493 ATLDRQCERLASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWT 551
           ATL R CER A +M     T ++ GVI + DG++SM+KLA+RMV +FCA +S S  H WT
Sbjct: 444 ATLQRMCERFACLMVKGTSTRDLGGVIPSPDGKRSMMKLAQRMVNNFCASISTSNGHRWT 503

Query: 552 TLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDIL 611
           TLSG     VRV   K+  DPG+P G+VLSAAT+ WLPV P+ VF+F RDE TR +WD+L
Sbjct: 504 TLSGLNEVGVRVTIHKNT-DPGQPNGVVLSAATTIWLPVSPQNVFNFFRDERTRPQWDVL 562

Query: 612 SNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPV 671
           SNG  VQE+AHIANG   GNC+S+LR     + N+SQ+NMLILQESC D + S VIY PV
Sbjct: 563 SNGNAVQEVAHIANGPHPGNCISVLR-----AFNTSQNNMLILQESCIDSSGSLVIYCPV 617

Query: 672 DIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAA--------SGGSLLTVAF 723
           D+ A+N+ ++G DP Y+ LLPSGF I PDG    G     ++        SGGSL+TV F
Sbjct: 618 DLPAINIAMSGEDPSYIPLLPSGFTISPDGRLDQGDGASSSSSTTASMGRSGGSLITVVF 677

Query: 724 QILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
           QILV S+P+AKL+L SV TVNNLI  TV++IKA+L+C S+
Sbjct: 678 QILVSSLPSAKLNLESVTTVNNLIGNTVQQIKAALNCPSS 717


>gi|225464265|ref|XP_002271012.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Vitis
           vinifera]
          Length = 715

 Score =  731 bits (1886), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/700 (54%), Positives = 487/700 (69%), Gaps = 36/700 (5%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +KKRYHRHT HQIQ +E  FKECPHPD+KQR +LSREL L P Q+KFWFQN+RTQMK QH
Sbjct: 26  RKKRYHRHTAHQIQRLEGMFKECPHPDEKQRLQLSRELALAPRQIKFWFQNRRTQMKAQH 85

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMS-FDEHHLRLENARLRE 208
           ER +N  LR EN+K+R +N+  REAL N  CP+CGGP  IGE S FDE  LR+ENA+L+E
Sbjct: 86  ERADNCALRVENDKIRCENIAIREALKNVICPSCGGP-PIGEDSYFDEQKLRVENAQLKE 144

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           E+DR+S+IAAKY+G+P+   P +  PV    L+L++G+FG Q G+G G      DLL   
Sbjct: 145 ELDRVSSIAAKYIGRPISQLPPVQ-PVHISSLDLSMGSFGGQ-GMGSGPSLD-LDLLPGS 201

Query: 269 SAP-----------TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEY 317
           S+            ++ DK ++ ++A  A++EL+R+ Q  EPLWM S      VLN + Y
Sbjct: 202 SSAMPILPFQGTGISDMDKSLMADVAGNALDELLRLLQTNEPLWMKSTTDGRDVLNLESY 261

Query: 318 VRTFPRGIGP-KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEV 376
            R FPR     K    + EASR++ VVIMN ++LV+I MD N+W  +F  IVS A TLEV
Sbjct: 262 ERIFPRANSHLKNPNVRIEASRDSGVVIMNSLALVDIFMDSNKWMELFPTIVSMARTLEV 321

Query: 377 LSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP-- 434
           LS+G+ G  +G+LQ+M  E QV S LVPTRE Y++RYC+Q  +G+WA+VDVS D  R   
Sbjct: 322 LSSGMMGGQSGSLQLMYGELQVLSSLVPTREFYFLRYCQQIEQGSWAIVDVSYDFPRDNQ 381

Query: 435 -SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLYKQLVSTGNAFGAKRWV 492
            +P     R PSGCLIQ+MPNGYSKVTWVEHVE++D+   H LY+ L+  G AFGA+RW+
Sbjct: 382 FAPQNPSHRLPSGCLIQDMPNGYSKVTWVEHVEIEDKTPTHRLYRDLIHRGLAFGAERWL 441

Query: 493 ATLDRQCERLASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWT 551
           ATL R CER A +M     T ++ GVI + DG++SM+KLA+RMV +FCA +S S  H WT
Sbjct: 442 ATLQRMCERFACLMVKGTSTRDLGGVIPSPDGKRSMMKLAQRMVNNFCASISTSNGHRWT 501

Query: 552 TLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDIL 611
           TLSG     VRV   K+  DPG+P G+VLSAAT+ WLPV P+ VF+F RDE TR +WD+L
Sbjct: 502 TLSGLNEVGVRVTIHKNT-DPGQPNGVVLSAATTIWLPVSPQNVFNFFRDERTRPQWDVL 560

Query: 612 SNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPV 671
           SNG  VQE+AHIANG   GNC+S+LR     + N+SQ+NMLILQESC D + S VIY PV
Sbjct: 561 SNGNAVQEVAHIANGPHPGNCISVLR-----AFNTSQNNMLILQESCIDSSGSLVIYCPV 615

Query: 672 DIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAA--------SGGSLLTVAF 723
           D+ A+N+ ++G DP Y+ LLPSGF I PDG    G     ++        SGGSL+TV F
Sbjct: 616 DLPAINIAMSGEDPSYIPLLPSGFTISPDGRLDQGDGASSSSSTTASMGRSGGSLITVVF 675

Query: 724 QILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
           QILV S+P+AKL+L SV TVNNLI  TV++IKA+L+C S+
Sbjct: 676 QILVSSLPSAKLNLESVTTVNNLIGNTVQQIKAALNCPSS 715


>gi|116310008|emb|CAH67034.1| OSIGBa0139P06.7 [Oryza sativa Indica Group]
          Length = 805

 Score =  726 bits (1874), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/715 (52%), Positives = 498/715 (69%), Gaps = 52/715 (7%)

Query: 88  PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
           P +KKRYHRHT  QIQE+EA FKECPHPD+KQR ELS+ LGLEP QVKFWFQN+RTQMK 
Sbjct: 101 PKRKKRYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRLGLEPRQVKFWFQNRRTQMKM 160

Query: 148 QHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLR 207
           Q ERHEN+ L+ EN+KLR++N+  REA SNA C  CGGP  +GE+S +EHHLR+ENARL+
Sbjct: 161 QLERHENSLLKQENDKLRSENLSIREATSNAVCVGCGGPAMLGEVSLEEHHLRVENARLK 220

Query: 208 EEIDRISAIAAKYVGKPVVNYPLLSP-------PVPSRPLELAVGNFGAQP--------- 251
           +E+ R+ A+AAK++GK +    +++P       PVP   LELAVG  G+ P         
Sbjct: 221 DELSRVCALAAKFLGKSI---SVMAPPQMHQPHPVPGSSLELAVGGIGSMPSATMPISTI 277

Query: 252 ----GIGGGEMYGAADLLRSISAPTEA---DKPMIIELAVAAMEELIRMAQMGEPLWM-- 302
               G     M      ++S + P+     DK + +ELA++AM+EL++MAQMG+PLW+  
Sbjct: 278 TDFAGAMSSSMGTVITPMKSEAEPSAMAGIDKSLFLELAMSAMDELVKMAQMGDPLWIPG 337

Query: 303 TSLDGTAA--VLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNH-ISLVEILMDVNQ 359
            S+  + A   LN +EY+ TFP  IG KP G+  EASRE+ +VI++   +LVE LMD  +
Sbjct: 338 ASVPSSPAKESLNFEEYLNTFPPCIGVKPEGYVSEASRESGIVIIDDGAALVETLMDERR 397

Query: 360 WSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGE 419
           WS +FS ++++A T E +STGVAG+ NGAL +M AE QV SPLVP RE  ++R+ KQ  +
Sbjct: 398 WSDMFSCMIAKASTTEEISTGVAGSRNGALLLMQAELQVLSPLVPIREVKFLRFSKQLAD 457

Query: 420 GTWAVVDVSLDNLRPSPAV---------RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR 470
           G WAVVDVS D L     +          CRR PSGC++Q+ PNG+ KVTWVEH E D+ 
Sbjct: 458 GVWAVVDVSADELMRDQGITSASSTANMNCRRLPSGCVLQDTPNGFVKVTWVEHTEYDEA 517

Query: 471 GVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMAT-NIPTGEVGVITNQDGRKSMLK 529
            VH LY+ L+ +G A GA RW+ATL RQCE LA +M++  +P  +   I + +G++SMLK
Sbjct: 518 SVHPLYRPLLRSGLALGAGRWIATLQRQCECLALLMSSIALPENDSSAI-HPEGKRSMLK 576

Query: 530 LAERMVISFCAGVSASTAHTWTTLSG-TG--ADDVRVMTRKSVDDPGRPPGIVLSAATSF 586
           LA RM  +FCAGVS S+   W+ L G TG   +DV VM RKSVD+PG PPG+VLSAATS 
Sbjct: 577 LARRMTDNFCAGVSTSSTREWSKLVGLTGNIGEDVHVMARKSVDEPGTPPGVVLSAATSV 636

Query: 587 WLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANS 646
           W+PV P+R+F+FL ++  R+EWDILSNGG +QE+  IA G+  GN V LL+ +       
Sbjct: 637 WMPVMPERLFNFLHNKGLRAEWDILSNGGPMQEVTSIAKGQQNGNTVCLLKAS---PTKD 693

Query: 647 SQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHG 706
            Q++MLILQE+C D + S V+YAPVDI AM++V++GGD   VALLPSGFAILP G S+ G
Sbjct: 694 KQNSMLILQETCADASGSMVVYAPVDIPAMHLVMSGGDSSCVALLPSGFAILPAGPSI-G 752

Query: 707 ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
           A+      GGSLLTVAFQIL +S P+AKL++ SV TV+NLI+CT+++IK +L C+
Sbjct: 753 AD---HKMGGSLLTVAFQILANSQPSAKLTVESVETVSNLISCTIKKIKTALHCD 804


>gi|115459990|ref|NP_001053595.1| Os04g0569100 [Oryza sativa Japonica Group]
 gi|38344373|emb|CAD41424.2| OSJNBb0032E06.7 [Oryza sativa Japonica Group]
 gi|113565166|dbj|BAF15509.1| Os04g0569100 [Oryza sativa Japonica Group]
          Length = 806

 Score =  726 bits (1874), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/715 (52%), Positives = 498/715 (69%), Gaps = 52/715 (7%)

Query: 88  PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
           P +KKRYHRHT  QIQE+EA FKECPHPD+KQR ELS+ LGLEP QVKFWFQN+RTQMK 
Sbjct: 102 PKRKKRYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRLGLEPRQVKFWFQNRRTQMKM 161

Query: 148 QHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLR 207
           Q ERHEN+ L+ EN+KLR++N+  REA SNA C  CGGP  +GE+S +EHHLR+ENARL+
Sbjct: 162 QLERHENSLLKQENDKLRSENLSIREATSNAVCVGCGGPAMLGEVSLEEHHLRVENARLK 221

Query: 208 EEIDRISAIAAKYVGKPVVNYPLLSP-------PVPSRPLELAVGNFGAQP--------- 251
           +E+ R+ A+AAK++GK +    +++P       PVP   LELAVG  G+ P         
Sbjct: 222 DELSRVCALAAKFLGKSI---SVMAPPQMHQPHPVPGSSLELAVGGIGSMPSATMPISTI 278

Query: 252 ----GIGGGEMYGAADLLRSISAPTEA---DKPMIIELAVAAMEELIRMAQMGEPLWM-- 302
               G     M      ++S + P+     DK + +ELA++AM+EL++MAQMG+PLW+  
Sbjct: 279 TDFAGAMSSSMGTVITPMKSEAEPSAMAGIDKSLFLELAMSAMDELVKMAQMGDPLWIPG 338

Query: 303 TSLDGTAA--VLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNH-ISLVEILMDVNQ 359
            S+  + A   LN +EY+ TFP  IG KP G+  EASRE+ +VI++   +LVE LMD  +
Sbjct: 339 ASVPSSPAKESLNFEEYLNTFPPCIGVKPEGYVSEASRESGIVIIDDGAALVETLMDERR 398

Query: 360 WSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGE 419
           WS +FS ++++A T E +STGVAG+ NGAL +M AE QV SPLVP RE  ++R+ KQ  +
Sbjct: 399 WSDMFSCMIAKASTTEEISTGVAGSRNGALLLMQAELQVLSPLVPIREVKFLRFSKQLAD 458

Query: 420 GTWAVVDVSLDNLRPSPAV---------RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR 470
           G WAVVDVS D L     +          CRR PSGC++Q+ PNG+ KVTWVEH E D+ 
Sbjct: 459 GVWAVVDVSADELMRDQGITSASSTANMNCRRLPSGCVLQDTPNGFVKVTWVEHTEYDEA 518

Query: 471 GVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMAT-NIPTGEVGVITNQDGRKSMLK 529
            VH LY+ L+ +G A GA RW+ATL RQCE LA +M++  +P  +   I + +G++SMLK
Sbjct: 519 SVHPLYRPLLRSGLALGAGRWIATLQRQCECLALLMSSIALPENDSSAI-HPEGKRSMLK 577

Query: 530 LAERMVISFCAGVSASTAHTWTTLSG-TG--ADDVRVMTRKSVDDPGRPPGIVLSAATSF 586
           LA RM  +FCAGVS S+   W+ L G TG   +DV VM RKSVD+PG PPG+VLSAATS 
Sbjct: 578 LARRMTDNFCAGVSTSSTREWSKLVGLTGNIGEDVHVMARKSVDEPGTPPGVVLSAATSV 637

Query: 587 WLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANS 646
           W+PV P+R+F+FL ++  R+EWDILSNGG +QE+  IA G+  GN V LL+ +       
Sbjct: 638 WMPVMPERLFNFLHNKGLRAEWDILSNGGPMQEVTSIAKGQQNGNTVCLLKAS---PTKD 694

Query: 647 SQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHG 706
            Q++MLILQE+C D + S V+YAPVDI AM++V++GGD   VALLPSGFAILP G S+ G
Sbjct: 695 KQNSMLILQETCADASGSMVVYAPVDIPAMHLVMSGGDSSCVALLPSGFAILPAGPSI-G 753

Query: 707 ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
           A+      GGSLLTVAFQIL +S P+AKL++ SV TV+NLI+CT+++IK +L C+
Sbjct: 754 AD---HKMGGSLLTVAFQILANSQPSAKLTVESVETVSNLISCTIKKIKTALHCD 805


>gi|359490389|ref|XP_003634081.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Vitis vinifera]
          Length = 783

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/746 (50%), Positives = 522/746 (69%), Gaps = 39/746 (5%)

Query: 39  MMEGQLHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQE----QRPNKKKRY 94
           ++EG++ P++  +N   S + R+ E+ ++S  SGS N +G   D+QE    +RP KK +Y
Sbjct: 50  LVEGRI-PVE--ENFDPSVMGRINEDGYESM-SGSGNLDGGLEDEQETLVLERPAKKLKY 105

Query: 95  HRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHEN 154
           HRHTQ QI E+E  FKE PHPD+KQR +LSR+L LEP QVKFWFQN+RTQMK Q ERHEN
Sbjct: 106 HRHTQEQINELETCFKEWPHPDEKQRLDLSRKLNLEPRQVKFWFQNRRTQMKNQLERHEN 165

Query: 155 TQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRIS 214
             LR EN+KLR +N+  ++A+ N  C +CGG   +G ++ +E+ LR+ENA+LR+E+ RI 
Sbjct: 166 VMLRQENDKLRVENVAIKDAVRNPICNHCGGVAMLGNITIEENQLRVENAQLRDELSRIC 225

Query: 215 AIAAKYVGKPVVNYPLLSP---PVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAP 271
            +A K++G+PV   PL SP   P PS  LEL V    A  G GG    G    +  ++ P
Sbjct: 226 GLAEKFLGRPVT--PLASPIALPRPSSNLELEV----AGNGFGGLNSGGTPLPMGPLTRP 279

Query: 272 --TEADKP----MIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGI 325
                +KP    + +ELAV AM+EL+R+AQ   P+WMTSLDG    LN  EY+RTF   I
Sbjct: 280 GMMGVEKPFNSSVFVELAVTAMDELLRLAQADSPIWMTSLDGGKETLNPVEYMRTFSPCI 339

Query: 326 GPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
           G KP+GF  EASRET +V++N ++LVE LMD ++W+ +F  ++++A T +VLS+G+    
Sbjct: 340 GLKPSGFVTEASRETGMVMINSLALVETLMDGSRWAQMFPCVIAKASTTDVLSSGIGRTR 399

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS----LDNLRPSPAVRCR 441
           +GALQ+M AE QV SPLVP R+  ++R+CKQHGEG WAVVDVS    LD    +  V CR
Sbjct: 400 HGALQLMHAELQVLSPLVPVRQVKFLRFCKQHGEGLWAVVDVSIDTALDGASINSFVNCR 459

Query: 442 RRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCER 501
           R  SGC++Q++ NGY++VTW+EH E D+  VH LY+ L+S+G  FGA RW+ATL RQCE 
Sbjct: 460 RLLSGCVVQDLSNGYTRVTWIEHSEYDESAVHYLYRSLLSSGLGFGALRWLATLQRQCES 519

Query: 502 LASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLS-GTGADD 560
           +A ++++ +P  +  V+T Q GR+S+L+L  RM  +FCAGV AST   W  L   +  +D
Sbjct: 520 IAILLSSTVPCEDHPVLT-QAGRRSLLQLTNRMRDNFCAGVCASTVRMWNKLHVASLGED 578

Query: 561 VRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEM 620
           V+VMTRKS++ PG PPG++LSAATS W+P+  +++F+FLRDE  RS+WDILSNGG +QEM
Sbjct: 579 VKVMTRKSMNIPGEPPGVILSAATSVWMPIMHQQLFNFLRDERQRSKWDILSNGGPMQEM 638

Query: 621 AHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVL 680
            HI  G+ + NCVSLLR N   + N + + MLILQE+  D + S ++YAP+D+ +M  V+
Sbjct: 639 IHIPKGQTSSNCVSLLRPN---ARNQNDNTMLILQETWADASGSLIVYAPLDVASMRAVM 695

Query: 681 NGGDPDYVALLPSGFAILPDGTSLHGANI-GEAASG------GSLLTVAFQILVDSVPTA 733
            GGD  +VALLPSGFAI+PDG+S +G +  G+ A G      GSLLTVAFQILV+S+P A
Sbjct: 696 TGGDSSFVALLPSGFAIVPDGSSGYGDDWSGKLARGSSNKGSGSLLTVAFQILVNSLPMA 755

Query: 734 KLSLGSVATVNNLIACTVERIKASLS 759
           KL++ SV TVN+L++CT+ +IK+++S
Sbjct: 756 KLNVESVETVNSLLSCTINKIKSAVS 781


>gi|356529444|ref|XP_003533302.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 896

 Score =  724 bits (1870), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/710 (51%), Positives = 496/710 (69%), Gaps = 47/710 (6%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +KKRYHRHT +QIQ +E+ FKECPHPD+KQR +LSRELGL P Q+KFWFQN+RTQMK QH
Sbjct: 198 RKKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMKAQH 257

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREE 209
           ER +N  LR EN+K+R +N+  REAL N  CP+CGGP    +  FDE  LRLENA+L+EE
Sbjct: 258 ERADNCALRAENDKIRCENIAIREALKNVICPSCGGPPMNDDCYFDEQKLRLENAQLKEE 317

Query: 210 IDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLR-SI 268
           +DR+S+IAAKY+G+P+   P +  P+    L+L++G F +Q G+GG  +    DLL  S 
Sbjct: 318 LDRVSSIAAKYIGRPISQLPPVQ-PIHISSLDLSMGTFASQ-GLGGPSL--DLDLLPGSS 373

Query: 269 SAP------------TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDE 316
           S+P            ++ DK ++ ++A  AMEE+IR+ Q  EPLWM   DG   VL+ D 
Sbjct: 374 SSPMLNVPPFQPACLSDMDKSLMSDIASNAMEEMIRLLQTNEPLWMKGADGR-DVLDLDS 432

Query: 317 YVRTFPRGIGP-KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLE 375
           Y R FP+     K      EASR++ VVIMN ++LV++ MD N+W  +F  IV+ A T+E
Sbjct: 433 YERMFPKANSHLKNPNVHVEASRDSGVVIMNGLTLVDMFMDPNKWMELFPTIVTMARTIE 492

Query: 376 VLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLD---NL 432
           V+S+G+ G+++G+LQ+M  E QV SPLV TRE Y++RYC+Q  +G WA+VDVS D   + 
Sbjct: 493 VISSGMMGSHSGSLQLMYEELQVLSPLVSTREFYFLRYCQQIEQGLWAIVDVSYDFPQDN 552

Query: 433 RPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLYKQLVSTGNAFGAKRW 491
           + +P  R  R PSG  IQ+MPNGYSKVTW+EHVE++D+  VH LY+ L+ +G AFGA+RW
Sbjct: 553 QFAPQYRSHRLPSGVFIQDMPNGYSKVTWIEHVEIEDKTPVHRLYRNLIYSGIAFGAQRW 612

Query: 492 VATLDRQCERLASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVISFCAGVSASTAHTW 550
           + TL R CER+A +M T   T ++ GVI + +G++SM+KLA+RMV +FCA +SAS  H W
Sbjct: 613 LTTLQRMCERIACLMVTGNSTRDLGGVIPSPEGKRSMMKLAQRMVTNFCASISASAGHRW 672

Query: 551 TTLSGTGADD--VRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
           TTLSG+G ++  VRV   KS  DPG+P G+VLSAAT+ WLP+PP+ VF+F +DE  R +W
Sbjct: 673 TTLSGSGMNEIGVRVTVHKS-SDPGQPNGVVLSAATTIWLPIPPQTVFNFFKDEKKRPQW 731

Query: 609 DILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIY 668
           D+LSNG  VQE+AHIANG   GNC+S+LR     + NSSQ+NMLILQESC D + S V+Y
Sbjct: 732 DVLSNGNAVQEVAHIANGPHPGNCISVLR-----AFNSSQNNMLILQESCVDSSGSLVVY 786

Query: 669 APVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH-GANIGEAASGGS---------- 717
            PVD+ A+N+ ++G DP Y+ LLPSGF I PDG +   G     + S GS          
Sbjct: 787 CPVDLPAINIAMSGEDPSYIPLLPSGFTISPDGQADQDGGGASTSTSTGSRVMGGGSGPG 846

Query: 718 ----LLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
               L+TVAFQILV S+P+AKL++ SV TVN+LI  TV+ IKA+L+C S+
Sbjct: 847 SGGSLITVAFQILVSSLPSAKLNMESVTTVNSLIGNTVQHIKAALNCPSS 896


>gi|1814424|gb|AAB41901.1| homeodomain protein AHDP [Arabidopsis thaliana]
          Length = 745

 Score =  724 bits (1870), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/683 (55%), Positives = 485/683 (71%), Gaps = 31/683 (4%)

Query: 60  RLREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           R REEE +S +SGS+N EG SG+DQ+   +P +KKRYHRHT  QIQE+E+ FKECPHPD+
Sbjct: 63  RSREEEHES-RSGSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHPDE 121

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSN 177
           KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KLRA+NM  REA+ N
Sbjct: 122 KQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRN 181

Query: 178 ASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPS 237
             C NCGGP  +G++S +EHHLR+ENARL++E+DR+  +  K++G    +         +
Sbjct: 182 PICTNCGGPAMLGDVSLEEHHLRIENARLKDELDRVCNLTGKFLGHHHNH-------HYN 234

Query: 238 RPLELAV------GNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELI 291
             LELAV      G+F   P  GGG         +S        K +++ELA+ AM+EL+
Sbjct: 235 SSLELAVGTNNNGGHFAFPPDFGGGGGCLPPQQQQSTVINGIDQKSVLLELALTAMDELV 294

Query: 292 RMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLV 351
           ++AQ  EPLW+ SLDG    LN+DEY+RTF      KPTG   EASR + +VI+N ++LV
Sbjct: 295 KLAQSEEPLWVKSLDGERDELNQDEYMRTFS---STKPTGLATEASRTSGMVIINSLALV 351

Query: 352 EILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYV 411
           E LMD N+W+ +F   V+RA T +V+S G+AG  NGALQ+M AE QV SPLVP R   ++
Sbjct: 352 ETLMDSNRWTEMFPCNVARATTTDVISGGMAGTINGALQLMNAELQVLSPLVPVRNVNFL 411

Query: 412 RYCKQHGEGTWAVVDVSLDNLRPSP--AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 469
           R+CKQH EG WAVVDVS+D +R +   A   RR PSGC++Q++ NGYSKVTWVEH E D+
Sbjct: 412 RFCKQHAEGVWAVVDVSIDPVRENSGGAPVIRRLPSGCVVQDVSNGYSKVTWVEHAEYDE 471

Query: 470 RGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK 529
             +H LY+ L+ +G  FG++RW+ATL RQCE LA ++++++ + +   IT   GRKSMLK
Sbjct: 472 NQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAILISSSVTSHDNTSIT-LGGRKSMLK 530

Query: 530 LAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGRPPGIVLSAATSFWL 588
           LA+RM  +FC+G+SA + H W+ L+    D DVRVMTRKSVDDPG PPGIVLSAATS WL
Sbjct: 531 LAQRMTFNFCSGISAPSVHNWSKLTVGNVDPDVRVMTRKSVDDPGEPPGIVLSAATSVWL 590

Query: 589 PVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQ 648
           P  P+R++DFLR+E  R EWDILSNGG +QEMAHI  G+D G  VSLLR N +   N++Q
Sbjct: 591 PAAPQRLYDFLRNERMRCEWDILSNGGPMQEMAHITKGQDQG--VSLLRSNAM---NANQ 645

Query: 649 SNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGAN 708
           S+MLILQE+C D + + V+YAPVDI AM+VV+NGGD  YVALLPSGFA+LPDG    G +
Sbjct: 646 SSMLILQETCIDASGALVVYAPVDIPAMHVVMNGGDSSYVALLPSGFAVLPDGGIDGGGS 705

Query: 709 IGEA---ASGGSLLTVAFQILVD 728
                    GGSLLTVAFQILV+
Sbjct: 706 GDGDQRPVGGGSLLTVAFQILVN 728


>gi|242049914|ref|XP_002462701.1| hypothetical protein SORBIDRAFT_02g030470 [Sorghum bicolor]
 gi|241926078|gb|EER99222.1| hypothetical protein SORBIDRAFT_02g030470 [Sorghum bicolor]
          Length = 872

 Score =  724 bits (1869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/855 (47%), Positives = 536/855 (62%), Gaps = 125/855 (14%)

Query: 6   MIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLD---------MTQNTSES 56
           +IPA  +P         GG G++ GL+L   TNM  GQL  L                  
Sbjct: 34  LIPAPPLPKP-------GGFGAT-GLSLGLQTNMEGGQLADLSRMGLIGSGGSASGGDGD 85

Query: 57  EIARLREEEFDSTKSGSENHEGASGD----DQEQRPNKKKRYHRHTQHQIQEMEAFFKEC 112
            + R R E+ + ++SGS+N +GASGD    D      KKKRYHRHT  QIQE+EA FKEC
Sbjct: 86  SLGRARGEDENDSRSGSDNVDGASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKEC 145

Query: 113 PHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYR 172
           PHPD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KLRA+NM  R
Sbjct: 146 PHPDEKQRMELSKRLNLESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMTIR 205

Query: 173 EALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLS 232
           EA+ N  C NCGG   +GE+S +E HLR+ENARL++E+DR+ A+A K++G+P+ +   +S
Sbjct: 206 EAMRNPICTNCGGAAVLGEVSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSGSSMS 265

Query: 233 PPVPSRPLELAV---GNFGAQP-------------GIGG--------------------- 255
               S  LEL V   G FG  P             G GG                     
Sbjct: 266 LQGCS-GLELGVGTNGGFGLGPLGASALQPLPDLMGAGGLPGPVGSAAAMRLPVGIGALD 324

Query: 256 GEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAV--LN 313
           G M+GAAD +         D+ +++EL +AAMEEL+++AQM EPLW+ S DG   +  LN
Sbjct: 325 GAMHGAADGI---------DRTVLLELGLAAMEELMKVAQMDEPLWLRSPDGGGGLETLN 375

Query: 314 EDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMT 373
            DEY R F R  GP P G+  EA+RE  + I++ + LV+ LMD  +WS +F  IV+RA T
Sbjct: 376 FDEYHRAFARVFGPSPAGYVSEATREAGIAIISSVDLVDSLMDAARWSEMFPCIVARAST 435

Query: 374 LEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN-L 432
            +++S+G+ G  +G++Q+M AE QV SPLVP RE  ++R+CKQH EG WAVVDVS+D  L
Sbjct: 436 TDIISSGMGGTRSGSIQLMHAELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAIL 495

Query: 433 RPSPA----------------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLY 476
           RP                   + CR  P+GC++Q+M NGYSKVTWV H E D+  VH LY
Sbjct: 496 RPDGGGNHHHHHAHNGGAAGYMGCRLLPTGCIVQDMNNGYSKVTWVVHAEYDEAVVHQLY 555

Query: 477 KQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVI 536
           + L+ +G A GA+RW+A+L RQC+ LA + + ++P  +   IT   GR+SMLKLA+RM  
Sbjct: 556 RPLLQSGQALGARRWLASLQRQCQYLAILCSNSLPARDHAAITPV-GRRSMLKLAQRMTD 614

Query: 537 SFCAGVSASTAHTWTTLS----------------------GTGADDVRVMTRKSVDDPGR 574
           +FCAGV AS A  W  L                       G G + VR+M R+SV  PG 
Sbjct: 615 NFCAGVCASAAQKWRRLDEWRGVGEGGGGSSAGNGGGGAAGEGEEKVRMMARQSVGAPGE 674

Query: 575 PPGIVLSAATSFWLPV-PPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCV 633
           PPG+VLSA TS  LPV  P+RVFD+LRDE  R EWDIL+NG  +QEM HIA G+  GN V
Sbjct: 675 PPGVVLSATTSVRLPVTSPQRVFDYLRDEQRRGEWDILANGEAMQEMDHIAKGQHHGNAV 734

Query: 634 SLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPS 693
           SLLR N   + + +Q+NMLILQE+CTDP+ S V+YAPVD+ +M+VV+NGGD  YV+LLPS
Sbjct: 735 SLLRPN---ATSGNQNNMLILQETCTDPSGSLVVYAPVDVQSMHVVMNGGDSAYVSLLPS 791

Query: 694 GFAILPDGTSLHGANIGEAA----------SGGSLLTVAFQILVDSVPTAKLSLGSVATV 743
           GFAILPDG     +N  + +          +GGSL+TVAFQILV+++PTAKL++ SV TV
Sbjct: 792 GFAILPDG-HCQSSNPAQGSPNCSGGGNSSTGGSLVTVAFQILVNNLPTAKLTVESVETV 850

Query: 744 NNLIACTVERIKASL 758
           +NL++CT+++IK++L
Sbjct: 851 SNLLSCTIQKIKSAL 865


>gi|224125934|ref|XP_002329753.1| predicted protein [Populus trichocarpa]
 gi|222870661|gb|EEF07792.1| predicted protein [Populus trichocarpa]
          Length = 725

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/703 (52%), Positives = 493/703 (70%), Gaps = 32/703 (4%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +KKRYHRHT  QIQ++E+ FKECPHPD+KQR +LSRELGL P Q+KFWFQN+RTQMK QH
Sbjct: 26  RKKRYHRHTALQIQKLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMKAQH 85

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREE 209
           ER +N+ LR EN+K+R +N+  REAL N  CP+CGGP    +  FDEH LR+EN +L+EE
Sbjct: 86  ERADNSSLRAENDKIRCENIAIREALKNVICPSCGGPPVTEDSYFDEHKLRMENVQLKEE 145

Query: 210 IDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMY-----GAADL 264
           +DR+S+IAAKY+G+P+   P + P   S  L+L++GNFGAQ GIGG  +       +++L
Sbjct: 146 LDRVSSIAAKYIGRPISQLPPVQPFHISS-LDLSMGNFGAQ-GIGGPSLDLDLIPTSSNL 203

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRG 324
                  ++ DK ++ ++A  AMEEL+R+ Q  EPLWM S      VLN D Y R FPR 
Sbjct: 204 AFQPPVISDMDKSLMTDVAANAMEELLRLLQTNEPLWMKSSADGRDVLNLDSYQRIFPRA 263

Query: 325 IGP-KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
           +   K    + EASR++ VVIMN ++LV++ MD N+W   F  +VS A T+EV+S+G+ G
Sbjct: 264 MSHLKNPNVRIEASRDSGVVIMNGVALVDMFMDSNKWVESFPTMVSVAKTIEVISSGMLG 323

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRR 443
           +++G+LQ+M  E QV SPLVPTRE   +RYC+Q  +G WA+V VS D  + +   RC R 
Sbjct: 324 SHSGSLQLMYEELQVLSPLVPTREFCILRYCQQIEQGLWAIVSVSYDIPQFASQFRCHRL 383

Query: 444 PSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQLVSTGNAFGAKRWVATLDRQCERL 502
           PSGCLIQ+MPNGYSKVTWVEHVE++D+   H LY+ L+ +G AFGA+RW+ATL R CER+
Sbjct: 384 PSGCLIQDMPNGYSKVTWVEHVEIEDKTTTHQLYRDLIHSGMAFGAERWLATLQRMCERV 443

Query: 503 ASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV 561
           A  M +   T ++ GVI + +G++SM+KLA+RMV SFC+ +S S +H W+TLSG     V
Sbjct: 444 ACQMVSGNSTRDLGGVIPSPEGKRSMMKLAQRMVSSFCSSISTSNSHRWSTLSGLHDVGV 503

Query: 562 RVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMA 621
           RV   KS  DPG+P G+VLSAAT+F LPV P+ VF F +DE TR +WD+LS+G  VQE+A
Sbjct: 504 RVTLHKST-DPGQPNGVVLSAATTFSLPVSPQNVFSFFKDERTRPQWDVLSSGNAVQEVA 562

Query: 622 HIANGRDTGNCVSLLRV-------------NCLQSANSSQSNMLILQESCTDPTASFVIY 668
           HI NG   GNC+S+LRV             +C  + N+SQ+NMLILQESC D + S V+Y
Sbjct: 563 HITNGSHPGNCISVLRVRLSLFGSFSTFYSDCFTAYNTSQNNMLILQESCVDSSGSLVVY 622

Query: 669 APVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAAS--------GGSLLT 720
            PVD+ A+N+ ++G DP Y+ LLPSGFAI PDG    G     +++         GSL+T
Sbjct: 623 CPVDLPAINIAMSGEDPSYIPLLPSGFAISPDGRPDQGDGASTSSNTQGSTARLSGSLIT 682

Query: 721 VAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
           VAFQILV S+P+AKL+L SV TVNNLI  TV++IKA+++C S+
Sbjct: 683 VAFQILVSSLPSAKLNLESVNTVNNLIGTTVQQIKAAMNCPSS 725


>gi|345193173|tpg|DAA34952.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414886368|tpg|DAA62382.1| TPA: outer cell layer3 [Zea mays]
          Length = 863

 Score =  723 bits (1865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/840 (48%), Positives = 533/840 (63%), Gaps = 98/840 (11%)

Query: 4   GVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIA---- 59
           G ++PA  +P         GG G++ GL+L   TNM   QL  L                
Sbjct: 30  GRLVPAPPLPKP-------GGFGAT-GLSLGLQTNMEGAQLGDLGRMGLIGGGGSGSGGD 81

Query: 60  -----RLREEEFDSTKSGSENHEGASGD----DQEQRPNKKKRYHRHTQHQIQEMEAFFK 110
                R RE+E DS +SGS+N +GASGD    D      KKKRYHRHT  QIQE+EA FK
Sbjct: 82  GDSLGRGREDEIDS-RSGSDNVDGASGDEIDPDNSNPRRKKKRYHRHTPQQIQELEAVFK 140

Query: 111 ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMR 170
           ECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KLRA+NM 
Sbjct: 141 ECPHPDEKQRMELSKRLNLESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMT 200

Query: 171 YREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPL 230
            REA+ N  C NCGG   +GE+S +E HLR+ENARL++E+DR+ A+A K++G+P+ +   
Sbjct: 201 IREAMRNPICANCGGAAVLGEVSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSGSS 260

Query: 231 LSPPVPS-RPLELAVG-NFGAQPG---------------------IGGGEM-----YGAA 262
           +S  +     LELAVG N G  PG                     +G   M      GA 
Sbjct: 261 MSSSLQGCSGLELAVGSNNGYGPGPLGASALQPLPDLLGAGLPGPVGSAAMRLPMGIGAL 320

Query: 263 DLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTA-AVLNEDEYVRTF 321
           D+    +A    D+ +++ELA+AAMEEL+++AQM EPLW+ S DG+    LN DEY R F
Sbjct: 321 DVALHGAAADGIDRTVLLELALAAMEELMKVAQMDEPLWLRSPDGSGLEALNLDEYHRAF 380

Query: 322 PRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGV 381
            R  GP P G+  EA+RE  V I + + LV+ LMD  +WS +F  IV+RA T +++S+G+
Sbjct: 381 ARVFGPSPAGYVTEATREAGVAITSSVDLVDSLMDAARWSEMFPCIVARASTTDIISSGM 440

Query: 382 AGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN-LRPSPA--- 437
            G  +G++Q+M AE QV SPLVP RE  ++R+CKQH EG WAVVDVS+D  LRP      
Sbjct: 441 GGTRSGSIQLMHAELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAILRPDGGHHH 500

Query: 438 ---------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGA 488
                    + CR  P+GC++Q+M NGYSKVTWV H E D+  VH LY+ L+ +G A GA
Sbjct: 501 AQNGGGAGYMGCRLLPTGCIVQDMNNGYSKVTWVVHAEYDEAVVHQLYRPLLQSGQALGA 560

Query: 489 KRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAH 548
           +RW+A+L RQC+ LA + + ++P  +   IT   GR+SMLKLA+RM  +FCAGV AS A 
Sbjct: 561 RRWLASLQRQCQYLAILCSNSLPARDHAAITPV-GRRSMLKLAQRMTDNFCAGVCASAAQ 619

Query: 549 TWTTLS-------------------GTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP 589
            W  L                    G G + VR+M R SV  PG PPG+VLSA TS  LP
Sbjct: 620 KWRRLDEWRSGEGGDAAGNGGSAAAGEGEEKVRMMARHSVGAPGDPPGVVLSATTSVRLP 679

Query: 590 -VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQ 648
              P+RVFD+LRDE  R EWDIL+NG  +QEM HIA G+  GN VSLLR N   + + +Q
Sbjct: 680 ATSPQRVFDYLRDEQRRGEWDILANGEAMQEMDHIAKGQHHGNAVSLLRPN---ATSGNQ 736

Query: 649 SNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG-----TS 703
           +NMLILQE+CTDP+ S V+YAPVD+ +M+VV+NGGD  YV+LLPSGFAILPDG      +
Sbjct: 737 NNMLILQETCTDPSGSLVVYAPVDVQSMHVVMNGGDSAYVSLLPSGFAILPDGHCQSPNT 796

Query: 704 LH-----GANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
            H           ++S GSL+TVAFQILV+++PTAKL++ SV TV+NL++CT+++IK++L
Sbjct: 797 AHQGSPSCGGSSSSSSTGSLVTVAFQILVNNLPTAKLTVESVETVSNLLSCTIQKIKSAL 856


>gi|187611423|sp|Q7Y0V9.2|ROC4_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC4; AltName:
           Full=GLABRA 2-like homeobox protein 4; AltName:
           Full=HD-ZIP protein ROC4; AltName: Full=Homeodomain
           transcription factor ROC4; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 4
          Length = 813

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/722 (52%), Positives = 498/722 (68%), Gaps = 59/722 (8%)

Query: 88  PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
           P +KKRYHRHT  QIQE+EA FKECPHPD+KQR ELS+ LGLEP QVKFWFQN+RTQMK 
Sbjct: 102 PKRKKRYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRLGLEPRQVKFWFQNRRTQMKM 161

Query: 148 QHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLR 207
           Q ERHEN+ L+ EN+KLR++N+  REA SNA C  CGGP  +GE+S +EHHLR+ENARL+
Sbjct: 162 QLERHENSLLKQENDKLRSENLSIREATSNAVCVGCGGPAMLGEVSLEEHHLRVENARLK 221

Query: 208 EEIDRISAIAAKYVGKPVVNYPLLSP-------PVPSRPLELAVGNFGAQP--------- 251
           +E+ R+ A+AAK++GK +    +++P       PVP   LELAVG  G+ P         
Sbjct: 222 DELSRVCALAAKFLGKSI---SVMAPPQMHQPHPVPGSSLELAVGGIGSMPSATMPISTI 278

Query: 252 ----GIGGGEMYGAADLLRSISAPTEA---DKPMIIELAVAAMEELIRMAQMGEPLWM-- 302
               G     M      ++S + P+     DK + +ELA++AM+EL++MAQMG+PLW+  
Sbjct: 279 TDFAGAMSSSMGTVITPMKSEAEPSAMAGIDKSLFLELAMSAMDELVKMAQMGDPLWIPG 338

Query: 303 TSLDGTAA--VLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNH-ISLVEILMDVNQ 359
            S+  + A   LN +EY+ TFP  IG KP G+  EASRE+ +VI++   +LVE LMD  +
Sbjct: 339 ASVPSSPAKESLNFEEYLNTFPPCIGVKPEGYVSEASRESGIVIIDDGAALVETLMDERR 398

Query: 360 WSTVFSGIVSRAMTLEVLSTGVAGNYNGAL-------QVMTAEFQVPSPLVPTRESYYVR 412
           WS +FS ++++A T E +STGVAG+ NGAL        VM AE QV SPLVP RE  ++R
Sbjct: 399 WSDMFSCMIAKASTTEEISTGVAGSRNGALLLVSDEHSVMQAELQVLSPLVPIREVKFLR 458

Query: 413 YCKQHGEGTWAVVDVSLDNLRPSPAV---------RCRRRPSGCLIQEMPNGYSKVTWVE 463
           + KQ  +G WAVVDVS D L     +          CRR PSGC++Q+ PNG+ KVTWVE
Sbjct: 459 FSKQLADGVWAVVDVSADELMRDQGITSASSTANMNCRRLPSGCVLQDTPNGFVKVTWVE 518

Query: 464 HVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMAT-NIPTGEVGVITNQD 522
           H E D+  VH LY+ L+ +G A GA RW+ATL RQCE LA +M++  +P  +   I + +
Sbjct: 519 HTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLALLMSSIALPENDSSAI-HPE 577

Query: 523 GRKSMLKLAERMVISFCAGVSASTAHTWTTLSG-TG--ADDVRVMTRKSVDDPGRPPGIV 579
           G++SMLKLA RM  +FCAGVS S+   W+ L G TG   +DV VM RKSVD+PG PPG+V
Sbjct: 578 GKRSMLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIGEDVHVMARKSVDEPGTPPGVV 637

Query: 580 LSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVN 639
           LSAATS W+PV P+R+F+FL ++  R+EWDILSNGG +QE+  IA G+  GN V LL+ +
Sbjct: 638 LSAATSVWMPVMPERLFNFLHNKGLRAEWDILSNGGPMQEVTSIAKGQQNGNTVCLLKAS 697

Query: 640 CLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 699
                   Q++MLILQE+C D + S V+YAPVDI AM++V++GGD   VALLPSGFAILP
Sbjct: 698 ---PTKDKQNSMLILQETCADASGSMVVYAPVDIPAMHLVMSGGDSSCVALLPSGFAILP 754

Query: 700 DGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
            G S+ GA+      GGSLLTVAFQIL +S P+AKL++ SV TV+NLI+CT+++IK +L 
Sbjct: 755 AGPSI-GAD---HKMGGSLLTVAFQILANSQPSAKLTVESVETVSNLISCTIKKIKTALH 810

Query: 760 CE 761
           C+
Sbjct: 811 CD 812


>gi|224136964|ref|XP_002322460.1| predicted protein [Populus trichocarpa]
 gi|222869456|gb|EEF06587.1| predicted protein [Populus trichocarpa]
          Length = 748

 Score =  719 bits (1856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/738 (50%), Positives = 505/738 (68%), Gaps = 40/738 (5%)

Query: 56  SEIARLREEEFDSTKSGSENHEGASGDDQE----QRPNKKKRYHRHTQHQIQEMEAFFKE 111
           S + R+RE+ ++S +SGS+N EGASG+DQ+    QRP  +K+Y+RHT +QIQE+E+FFKE
Sbjct: 17  SLVGRMREDGYES-RSGSDNIEGASGEDQDAGDYQRP--RKKYNRHTANQIQELESFFKE 73

Query: 112 CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRY 171
           CPHPD+KQR ELSR LGLE  Q+KFWFQN+RTQMKTQ ERHEN  LR EN+KLRA+N   
Sbjct: 74  CPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQLERHENAILRQENDKLRAENELL 133

Query: 172 REALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLL 231
           ++ +S+  C NCGGP     +S+++  LR+ENARL++E+ R+ A+A K++G+P+ +    
Sbjct: 134 KQNMSDPICNNCGGPVVPVPVSYEQQQLRIENARLKDELGRVCALANKFLGRPLTSSASP 193

Query: 232 SPPVPSR-PLELAV-----GNFGAQPGI--------GGGEMYGAADLLRSISAPTEADKP 277
            PP  S    +LAV     GN G             GG  M     +  ++      D+ 
Sbjct: 194 VPPFGSNTKFDLAVGRNGYGNLGHTDNTLPMGLDNNGGVMMPLMKPIGNAVGNEVPFDRS 253

Query: 278 MIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEAS 337
           M ++LA+AAM+ELI++AQ+  P+W+ SLDG   VLN +EY+RTFP  IG KP+ F  EA+
Sbjct: 254 MFVDLALAAMDELIKIAQVESPIWIKSLDGGKEVLNHEEYMRTFPPCIGMKPSNFVIEAT 313

Query: 338 RETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQ 397
           RE+ VV+ N + LVE LMDVN W  +F  +++RA T++++S+G+ G  +GALQ++ AEFQ
Sbjct: 314 RESGVVLANSLDLVETLMDVNGWVEMFPSLIARAATIDIVSSGMGGTKSGALQMIHAEFQ 373

Query: 398 VPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLD----NLRPSPAVRCRRRPSGCLIQEMP 453
           V SP VP R+  ++R CKQ  EG WAV DVS+D    NL     V CRR PSGC+IQ+M 
Sbjct: 374 VISPFVPVRQVKFLRLCKQLAEGVWAVADVSVDGNQENLNAQTPVTCRRLPSGCIIQDMN 433

Query: 454 NGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTG 513
           NG  KVTWVEH E D+  VH LY+ ++++G  FGA+RW+A L R  E +A +++  I  G
Sbjct: 434 NGCCKVTWVEHSEYDESAVHRLYRHILNSGMGFGAQRWIAALQRHYECMAMLLSPTI-LG 492

Query: 514 EVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTL-SGTGADDVRVMTRKSVDDP 572
           E   + N  G+KSMLKLA RMV SFC+GV AST H W  L   + ++DVR++TRK +++P
Sbjct: 493 EDQTVINLGGKKSMLKLARRMVDSFCSGVCASTLHNWGNLVVESVSEDVRILTRKIINEP 552

Query: 573 GRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNC 632
           G P GIVLS +TS WLPV  +R+FDFLRDE +RS+WDILSNGG++QEM  I  G+   N 
Sbjct: 553 GEPDGIVLSVSTSVWLPVSQQRLFDFLRDEQSRSQWDILSNGGILQEMVQIPKGQGHWNT 612

Query: 633 VSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLP 692
           VS+LR   +  AN+S  NMLILQE+  D + S V+YAPVD+ +++VV+NGGD  YVALLP
Sbjct: 613 VSVLRSTAV-DANAS-DNMLILQETWNDVSGSLVVYAPVDVQSVSVVMNGGDSTYVALLP 670

Query: 693 SGFAILPDGTSLHGA-----------NIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVA 741
           SGF ILP  +  +G            +    + GGS LTV FQIL  ++P+AKL++ SV 
Sbjct: 671 SGFVILPGNSFSNGEPNNCNGNPAKRDCDGNSGGGSFLTVGFQILASNLPSAKLTVESVK 730

Query: 742 TVNNLIACTVERIKASLS 759
           TV+NLI+CT++RIK + +
Sbjct: 731 TVHNLISCTMQRIKTAFN 748


>gi|356524732|ref|XP_003530982.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 721

 Score =  719 bits (1855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/709 (51%), Positives = 491/709 (69%), Gaps = 39/709 (5%)

Query: 81  GDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
           G D ++R   +KRYHRHT +QIQ +E+ FKECPHPD+KQR +LSRELGL P Q+KFWFQN
Sbjct: 18  GSDSQER---RKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQN 74

Query: 141 KRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLR 200
           +RTQMK QHER +N  LR +N+K+R +N+  REAL N  CP+CG P    +  FD+  LR
Sbjct: 75  RRTQMKAQHERADNCALRADNDKIRCENIAIREALKNVICPSCGAPPLNDDCYFDDQKLR 134

Query: 201 LENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYG 260
           LENA L+EE+DR+S+IAAKY+G+P+   P +  P+    L+L++ ++G Q  +G      
Sbjct: 135 LENAHLKEELDRVSSIAAKYIGRPISQLPPVQ-PIHISSLDLSMASYGNQGMVGPAPSSL 193

Query: 261 AADLL-----RSISAP------TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTA 309
             DLL      S S P      ++ DK ++ ++A  AMEE +R+ Q  EPLW+ S     
Sbjct: 194 NLDLLPAAGTSSSSMPYHPPCLSDMDKSLMSDIASNAMEEFLRLVQTNEPLWLKSNVDAR 253

Query: 310 AVLNEDEYVRTFPR-GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIV 368
            VL+ D Y R F +    PK    + EASR++ VV+MN ++LV++ MD N+W  +F  IV
Sbjct: 254 DVLSCDAYERMFHKPNTRPKNPNVRIEASRDSGVVLMNTLALVDMFMDPNKWIQLFPTIV 313

Query: 369 SRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS 428
           S A T++V+S+G+ G+ +G+LQ+M  E QV SPLV TRE Y++RYC+Q  +GTWAV+DVS
Sbjct: 314 SVARTIQVISSGMMGSCSGSLQLMYQELQVLSPLVSTREFYFLRYCQQIEQGTWAVMDVS 373

Query: 429 LDNLRPS---PAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV-HNLYKQLVSTGN 484
            D  + S   P  R  R PSGCLIQ+MP+G+SK+TWVEHVE++D+ + H LY+ L+ +G 
Sbjct: 374 YDFPQDSHYAPQFRSHRCPSGCLIQDMPDGHSKITWVEHVEIEDKTLPHRLYRNLIYSGM 433

Query: 485 AFGAKRWVATLDRQCERLASVMATNIPTGEV--GVITNQDGRKSMLKLAERMVISFCAGV 542
           AFGA+RW+ TL R CERL  +MAT+ PT +   GVI++ +G++SM+KLA+RMV +FCA +
Sbjct: 434 AFGAERWLTTLQRMCERLTYLMATSNPTRDNLGGVISSPEGKRSMMKLAQRMVTNFCANI 493

Query: 543 SASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDE 602
           S S+ H WTTLSG     VRV   KS  DPG+P G+VLSAAT+ WLP PP  VF+F +DE
Sbjct: 494 STSSGHRWTTLSGLNEIVVRVTVHKS-SDPGQPNGVVLSAATTIWLPTPPHAVFNFFKDE 552

Query: 603 NTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPT 662
           N R +WD+LSNG  VQE+A+IANG   GN +S+LR     + N+S  NMLILQESC D  
Sbjct: 553 NKRPQWDVLSNGNAVQEVANIANGLHPGNSISVLR-----AFNNSTQNMLILQESCIDSY 607

Query: 663 ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG-----------TSLHGANIGE 711
            SFV+Y PVD+ ++N+ ++G DP Y+ LLP+GF ILPDG           TS + AN   
Sbjct: 608 GSFVVYCPVDLPSINLAMSGEDPSYIPLLPNGFTILPDGQPDQEGDDGASTSSNNANRNI 667

Query: 712 AASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
             SGGSL+T+AFQILV S+P+AKL++ SV TVNNLI  TV++IK+SLSC
Sbjct: 668 VRSGGSLVTIAFQILVSSLPSAKLNMESVTTVNNLIGSTVQQIKSSLSC 716


>gi|449439589|ref|XP_004137568.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Cucumis
           sativus]
 gi|449517265|ref|XP_004165666.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Cucumis
           sativus]
          Length = 705

 Score =  718 bits (1854), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/712 (52%), Positives = 493/712 (69%), Gaps = 37/712 (5%)

Query: 78  GASGDDQEQRPN---KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 134
           G SG D +   +   +KKRYHRH  +QIQ +EA FKECPHPD+KQR +LSRELGL P Q+
Sbjct: 5   GGSGWDNDPSSDPQRRKKRYHRHNANQIQRLEAMFKECPHPDEKQRLQLSRELGLAPRQI 64

Query: 135 KFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSF 194
           KFWFQN+RTQMK QHER +N+ LR EN+K+R +N+  REAL N  CP+CGGP  + +  F
Sbjct: 65  KFWFQNRRTQMKAQHERADNSALRAENDKIRCENIAIREALKNVICPSCGGP-PLQDPYF 123

Query: 195 DEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIG 254
           DEH LR+ENA L+EE+DR+S+IAAKY+G+P+   P + P   S  LEL++G+F +Q  +G
Sbjct: 124 DEHKLRIENAHLKEELDRVSSIAAKYIGRPISQLPPIQPSHFSS-LELSMGSFPSQE-MG 181

Query: 255 GGEMYGAADLL--RSISAP----------TEADKPMIIELAVAAMEELIRMAQMGEPLWM 302
              +    DLL   S S P          +  DK ++ E+A  AM EL+R++Q  EP WM
Sbjct: 182 CPSL--DLDLLSASSTSVPNLPYHHPIHLSTVDKSLMTEIATNAMAELLRLSQTNEPFWM 239

Query: 303 TSLDGTAAVLNEDEYVRTFPRGIGP-KPTGFKCEASRETAVVIMNHISLVEILMDVNQWS 361
            S      +L+ + Y   FPR   P K   F+ EASR++ VVI++  +LV+I MD N+W+
Sbjct: 240 KSPTDGRDLLDLETYEHAFPRPNTPLKNLHFRTEASRDSGVVIISSAALVDIFMDSNKWT 299

Query: 362 TVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGT 421
            +F  IVS A TLEV+S+G+ G+ NG+LQ+M  E Q+ SPLVPTR  Y++RYC+Q  +G 
Sbjct: 300 ELFPTIVSVARTLEVVSSGMLGSQNGSLQLMYQELQLLSPLVPTRHFYFIRYCQQIEQGV 359

Query: 422 WAVVDVSLDNLRPSPAV---RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLYK 477
           WAVVDVS +  R +  V   +C R PSGCLIQ+MPNGYSKVTW+EHVEV+DRG  H L++
Sbjct: 360 WAVVDVSYNIPRENQIVSHPQCHRFPSGCLIQDMPNGYSKVTWIEHVEVEDRGSTHWLFR 419

Query: 478 QLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVI 536
            L+ +G AFGA+RW+ATL R  ER A +M T+    ++ GVI + +G++SM+KLA+RMV 
Sbjct: 420 DLIHSGLAFGAERWLATLQRMSERFACLMVTSSSNQDLGGVIPSLEGKRSMMKLAQRMVN 479

Query: 537 SFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVF 596
           +FCA +S S  H WTTLSG     VRV   KS D  G+P G+VLSAAT+ WLPV P+ +F
Sbjct: 480 NFCASISTSHGHRWTTLSGMNEVGVRVTVHKSTDS-GQPNGVVLSAATTIWLPVSPQTIF 538

Query: 597 DFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQE 656
           +F +++ TRS+WD+LS G  VQE+AHI+NG   GNC+S+LR       N+SQ+NMLILQE
Sbjct: 539 NFFKNDRTRSQWDVLSEGNPVQEVAHISNGSHPGNCISVLR-----GFNTSQNNMLILQE 593

Query: 657 SCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAA--- 713
           SC D + S V+Y PVD+ AMNV ++G DP  + LLPSGF ILPDG    G     ++   
Sbjct: 594 SCIDSSGSLVVYCPVDLPAMNVAMSGEDPSSIPLLPSGFTILPDGRRDQGEGASSSSDVH 653

Query: 714 --SGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
             SGGSL+TVAFQILV S+P+ KL+L SV TVNNLI+ TV +IK +L+C S+
Sbjct: 654 NRSGGSLVTVAFQILVSSLPSGKLNLESVTTVNNLISTTVHQIKTALNCHSS 705


>gi|162462506|ref|NP_001105125.1| outer cell layer3 [Zea mays]
 gi|8920423|emb|CAB96423.1| OCL3 protein [Zea mays]
          Length = 863

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/840 (48%), Positives = 533/840 (63%), Gaps = 98/840 (11%)

Query: 4   GVMIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIA---- 59
           G ++PA  +P         GG G++ GL+L   TNM   QL  L                
Sbjct: 30  GRLVPAPPLPKP-------GGFGAT-GLSLGLQTNMEGAQLGDLGRMGLIGGGGSGSGGD 81

Query: 60  -----RLREEEFDSTKSGSENHEGASGD----DQEQRPNKKKRYHRHTQHQIQEMEAFFK 110
                R RE+E DS +SGS+N +GASGD    D      KKKRYHRHT  QIQE+EA FK
Sbjct: 82  GDSLGRGREDEIDS-RSGSDNVDGASGDEIDPDNSNPRRKKKRYHRHTPQQIQELEAVFK 140

Query: 111 ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMR 170
           ECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KLRA+NM 
Sbjct: 141 ECPHPDEKQRMELSKRLNLESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMT 200

Query: 171 YREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPL 230
            REA+ N  C NCGG   +GE+S +E HLR+ENARL++E+DR+ A+A K++G+P+ +   
Sbjct: 201 IREAMRNPICANCGGAAVLGEVSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSGSS 260

Query: 231 LSPPVPS-RPLELAVGN--------FGAQ-------------PG-IGGGEM-----YGAA 262
           +S  +     LEL VG+         GA              PG +G   M      GA 
Sbjct: 261 MSSSLQGCSGLELGVGSNNGYGLGPLGASALQPLPDLLGAGLPGPVGSAAMRLPMGIGAL 320

Query: 263 DLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTA-AVLNEDEYVRTF 321
           D+    +A    D+ +++ELA+AAMEEL+++AQM EPLW+ S DG+    LN DEY R F
Sbjct: 321 DVALHGAAADGIDRTVLLELALAAMEELMKVAQMDEPLWLRSPDGSGLEALNLDEYHRAF 380

Query: 322 PRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGV 381
            R  GP P G+  EA+RE  V I + + LV+ LMD  +WS +F  IV+RA T +++S+G+
Sbjct: 381 ARVFGPSPAGYVTEATREAGVAITSSVDLVDSLMDAARWSEMFPCIVARASTTDIISSGM 440

Query: 382 AGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN-LRPSPA--- 437
            G  +G++Q+M AE QV SPLVP RE  ++R+CKQH +G WAVVDVS+D  LRP      
Sbjct: 441 GGTRSGSIQLMHAELQVLSPLVPIREVVFLRFCKQHAKGLWAVVDVSVDAILRPDGGHHH 500

Query: 438 ---------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGA 488
                    + CR  P+GC++Q+M NGYSKVTWV H E D+  VH LY+ L+ +G A GA
Sbjct: 501 AQNGGGAGYMGCRLLPTGCIVQDMNNGYSKVTWVVHAEYDEAVVHQLYRPLLQSGQALGA 560

Query: 489 KRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAH 548
           +RW+A+L RQC+ LA + + ++P  +   IT   GR+SMLKLA+RM  +FCAGV AS A 
Sbjct: 561 RRWLASLQRQCQYLAILCSNSLPARDHAAITPV-GRRSMLKLAQRMTDNFCAGVCASAAQ 619

Query: 549 TWTTLS-------------------GTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP 589
            W  L                    G G + VR+M R SV  PG PPG+VLSA TS  LP
Sbjct: 620 KWRRLDEWRSGEGGDAAGNGGSAAAGEGEEKVRMMARHSVGAPGDPPGVVLSATTSVRLP 679

Query: 590 -VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQ 648
              P+RVFD+LRDE  R EWDIL+NG  +QEM HIA G+  GN VSLLR N   + + +Q
Sbjct: 680 ATSPQRVFDYLRDEQRRGEWDILANGEAMQEMDHIAKGQHHGNAVSLLRPN---ATSGNQ 736

Query: 649 SNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG------- 701
           +NMLILQE+CTDP+ S V+YAPVD+ +M+VV+NGGD  YV+LLPSGFAILPDG       
Sbjct: 737 NNMLILQETCTDPSGSLVVYAPVDVQSMHVVMNGGDSAYVSLLPSGFAILPDGHCQSPNP 796

Query: 702 ---TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
               S      G ++S GSL+TVAFQILV+++PTAKL++ SV TV+NL++CT+++IK++L
Sbjct: 797 AHQGSPSCGGSGSSSSTGSLVTVAFQILVNNLPTAKLTVESVETVSNLLSCTIQKIKSAL 856


>gi|224120056|ref|XP_002318231.1| predicted protein [Populus trichocarpa]
 gi|222858904|gb|EEE96451.1| predicted protein [Populus trichocarpa]
          Length = 734

 Score =  714 bits (1844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/735 (50%), Positives = 503/735 (68%), Gaps = 39/735 (5%)

Query: 59  ARLREEEFDSTKSGSENHEGASGDDQE----QRPNKKKRYHRHTQHQIQEMEAFFKECPH 114
            R++E+ ++S +SGS+N EGASG+DQ+    QRP  +K+Y+RHT +QIQE+E+FFKECPH
Sbjct: 5   GRIKEDGYES-RSGSDNIEGASGEDQDVGDDQRP--RKKYNRHTANQIQELESFFKECPH 61

Query: 115 PDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREA 174
           PD+KQR ELSR LGLE  Q+KFWFQN+RTQMKTQ ERHEN  LR +N+KLR +N   ++ 
Sbjct: 62  PDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQLERHENVILRQDNDKLRLENELLKQN 121

Query: 175 LSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPP 234
           +S+  C NCGGP   G +S ++  LR+ENARL +E+ R+ A+A K++G+P+ +     PP
Sbjct: 122 MSDPICNNCGGPVVPGPVSDEQQQLRIENARLTDELGRVCALANKFLGRPLTSSANPIPP 181

Query: 235 VPSR-PLELAVG-NFGAQPGIGGGEMYGAADLLRSISAP------------TEADKPMII 280
             +   L+LAVG N     G     +    D  R I  P               D+ + +
Sbjct: 182 FSTNSKLDLAVGINGYGNLGHTDNMLPMGLDNNRGIMMPLMKPIGNAVGKEVPHDRSIFV 241

Query: 281 ELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRET 340
           +LA+AAM+ELI+MAQ+  P+W+ SLDG   VLN +EY RTFPR IG KP+ F  EA+R +
Sbjct: 242 DLALAAMDELIKMAQIESPIWIKSLDGGKEVLNHEEYTRTFPR-IGMKPSNFVTEATRVS 300

Query: 341 AVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPS 400
            VV++N  +LVE LMDVN W  +F  +++RA T +++S+G+ G  +GALQ++ AEFQ+ S
Sbjct: 301 GVVLVNISALVETLMDVNGWVEMFPSLIARAATTDIISSGMGGTKSGALQMIHAEFQLIS 360

Query: 401 PLVPTRESYYVRYCKQHGEGTWAVVDVSLD----NLRPSPAVRCRRRPSGCLIQEMPNGY 456
           P VP R+  ++R CKQ  EG WAVVDVS+D    NL     V C+R PSGC+IQ+M NG 
Sbjct: 361 PFVPVRQVKFLRLCKQLTEGVWAVVDVSIDANQENLNAQAPVTCKRLPSGCIIQDMNNGC 420

Query: 457 SKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVG 516
           SKVTWVEH E D+  VH LY+ ++S+G  FGA+RW+A L R  E +A +M+ +I  GE  
Sbjct: 421 SKVTWVEHSEYDESAVHQLYRPILSSGRGFGAQRWLAALQRYYEGMAMIMSPSI-LGEDQ 479

Query: 517 VITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTL-SGTGADDVRVMTRKSVDDPGRP 575
            + N  G+KSMLKLA RMV +FC+GV AS+ H W  L +G  ++DVR++TRKS+++PG P
Sbjct: 480 TVINLGGKKSMLKLARRMVDNFCSGVCASSLHNWGNLVAGNVSEDVRILTRKSINEPGEP 539

Query: 576 PGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSL 635
            GIVLSAATS WLPV  +R+FDFLRDE +RS WDILSNGG++QE+  I  G+   N VSL
Sbjct: 540 DGIVLSAATSVWLPVSRQRLFDFLRDEQSRSHWDILSNGGMLQEIIQIPKGQGQCNRVSL 599

Query: 636 LRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGF 695
           LR      A++ ++NMLILQE+  D + S V+YAPVDI +M+VV +GGD  YVALLPSGF
Sbjct: 600 LRSTVAVDADAGENNMLILQETRNDVSGSQVVYAPVDIQSMSVVTSGGDSTYVALLPSGF 659

Query: 696 AILPDGTSLHGA-----------NIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVN 744
            ILPD +  +G            +      GGS  TV FQIL  ++P+AKL++ SV T++
Sbjct: 660 VILPDNSFSNGEPSNSDGNPVKRDSDSNNGGGSFFTVGFQILASNLPSAKLTVESVETIH 719

Query: 745 NLIACTVERIKASLS 759
           NLI+CT++RI+ + +
Sbjct: 720 NLISCTMQRIRTAFN 734


>gi|356561849|ref|XP_003549189.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 718

 Score =  714 bits (1844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/732 (50%), Positives = 502/732 (68%), Gaps = 48/732 (6%)

Query: 65  EFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELS 124
           EF S   G  +H      D ++R   KKRYHRHT +QIQ +E+ FKECPHPD+KQR +LS
Sbjct: 2   EFGSGSPGDRHHHHDGSSDSQRR---KKRYHRHTANQIQRLESMFKECPHPDEKQRLQLS 58

Query: 125 RELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCG 184
           RELGL P Q+KFWFQN+RTQMK QHER +N  LR EN+K+R +N+  REAL N  CP+CG
Sbjct: 59  RELGLAPRQIKFWFQNRRTQMKAQHERADNCALRAENDKIRCENIAIREALKNVICPSCG 118

Query: 185 GPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAV 244
           GP    +  FDE  LRLENA+L+EE+DR+S+IAAKY+G+P+   P +  P+    L+L++
Sbjct: 119 GPPMNDDCYFDEQKLRLENAQLKEELDRVSSIAAKYIGRPISQLPPVQ-PIHISSLDLSM 177

Query: 245 GNFGAQPGIGGGEMYGAADLL---RSISAP----------TEADKPMIIELAVAAMEELI 291
           G F +Q G+GG  +    DLL    S S P          ++ DK ++ ++A  AMEE+I
Sbjct: 178 GTFASQ-GLGGPSL--DLDLLPGSSSSSMPNVPPFQPPCLSDMDKSLMSDIASNAMEEMI 234

Query: 292 RMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP-KPTGFKCEASRETAVVIMNHISL 350
           R+ Q  EPLWM   DG   VL+ D Y R FP+     K      EASR++ VVIMN ++L
Sbjct: 235 RLLQTNEPLWMKGADGR-DVLDLDSYERMFPKANSHLKNPNVHVEASRDSGVVIMNGLTL 293

Query: 351 VEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYY 410
           V++ MD N+W  +FS IV+ A T+EV+S+G+ G + G+LQ+M  E QV SPLV TRE Y+
Sbjct: 294 VDMFMDPNKWMELFSTIVTMARTIEVISSGMMGGHGGSLQLMYEELQVLSPLVSTREFYF 353

Query: 411 VRYCKQHGEGTWAVVDVSLD---NLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEV 467
           +RYC+Q  +G WA+VDVS D   + + +P  R  R PSG  IQ+MPNGYSKVTW+EHVE+
Sbjct: 354 LRYCQQIEQGLWAIVDVSYDFTQDNQFAPQFRSHRLPSGVFIQDMPNGYSKVTWIEHVEI 413

Query: 468 DDRG-VHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEV-GVITNQDGRK 525
           +D+  VH LY+ ++ +G AFGA+RW+ TL R CER+A ++ T   T ++ GVI + +G++
Sbjct: 414 EDKTPVHRLYRNIIYSGIAFGAQRWLTTLQRMCERIACLLVTGNSTRDLGGVIPSPEGKR 473

Query: 526 SMLKLAERMVISFCAGVSASTAHTWTTLSGTGADD--VRVMTRKSVDDPGRPPGIVLSAA 583
           SM+KLA+RMV +FCA +S+S  H WTTLSG+G ++  VRV   KS  DPG+P G+VLSAA
Sbjct: 474 SMMKLAQRMVTNFCASISSSAGHRWTTLSGSGMNEVGVRVTVHKS-SDPGQPNGVVLSAA 532

Query: 584 TSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQS 643
           T+ WLP+PP+ VF+F +DE  R +WD+LSNG  VQE+AHIANG   GNC+S+LR     +
Sbjct: 533 TTIWLPIPPQTVFNFFKDEKKRPQWDVLSNGNAVQEVAHIANGSHPGNCISVLR-----A 587

Query: 644 ANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTS 703
            NSSQ+NMLILQESC D + S V+Y PVD+ A+N+ ++G DP Y+ LLPSGF I PDG +
Sbjct: 588 FNSSQNNMLILQESCVDSSGSLVVYCPVDLPAINIAMSGEDPSYIPLLPSGFTISPDGQA 647

Query: 704 LHGANIGEAASGGS------------LLTVAFQILVDSVPTAKLSLGSVATVNNLIACTV 751
                 G + S  S            L+TVAFQILV S+P+AKL++ SV TVN+LI  TV
Sbjct: 648 DQDGG-GASTSTSSRVMGGGSGSGGSLITVAFQILVSSLPSAKLNMESVTTVNSLIGNTV 706

Query: 752 ERIKASLSCESA 763
           + IKA+L+C S+
Sbjct: 707 QHIKAALNCPSS 718


>gi|31339101|dbj|BAC77157.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 813

 Score =  714 bits (1843), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/722 (51%), Positives = 496/722 (68%), Gaps = 59/722 (8%)

Query: 88  PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
           P +KKRYHRHT  QIQE+EA FKECPHPD+KQR ELS+ LGLEP QVKFWFQN+RTQMK 
Sbjct: 102 PKRKKRYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRLGLEPRQVKFWFQNRRTQMKM 161

Query: 148 QHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLR 207
           Q ERHEN+ L+ EN+KLR++N+  REA SNA C  CGGP  +GE+S +EHHLR+ENARL+
Sbjct: 162 QLERHENSLLKQENDKLRSENLSIREATSNAVCVGCGGPAMLGEVSLEEHHLRVENARLK 221

Query: 208 EEIDRISAIAAKYVGKPVVNYPLLSP-------PVPSRPLELAVGNFGAQP--------- 251
           +E+ R+ A+AAK++GK +    +++P       PVP   LELAVG  G+ P         
Sbjct: 222 DELSRVCALAAKFLGKSI---SVMAPPQMHQPHPVPGSSLELAVGGIGSMPSATMPISTI 278

Query: 252 ----GIGGGEMYGAADLLRSISAPTEA---DKPMIIELAVAAMEELIRMAQMGEPLWM-- 302
               G     M      ++S + P+     DK + +ELA++AM+EL++MAQMG+PLW+  
Sbjct: 279 TDFAGAMSSSMGTVITPMKSEAEPSAMAGIDKSLFLELAMSAMDELVKMAQMGDPLWIPG 338

Query: 303 TSLDGTAA--VLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNH-ISLVEILMDVNQ 359
            S+  + A   LN +EY+ TFP  IG KP G+  EASRE+ +VI++   +LVE LMD  +
Sbjct: 339 ASVPSSPAKESLNFEEYLNTFPPCIGVKPEGYVSEASRESGIVIIDDGAALVETLMDERR 398

Query: 360 WSTVFSGIVSRAMTLEVLSTGVAGNYNGAL-------QVMTAEFQVPSPLVPTRESYYVR 412
           WS +FS ++++A T E +STGVAG+ NGAL        VM AE QV SPLVP RE  ++R
Sbjct: 399 WSDMFSCMIAKASTTEEISTGVAGSRNGALLLVSDEHSVMQAELQVLSPLVPIREVKFLR 458

Query: 413 YCKQHGEGTWAVVDVSLDNLRPSPAV---------RCRRRPSGCLIQEMPNGYSKVTWVE 463
           + KQ  +G WAVVDVS D L     +          CRR PSGC++Q+ PNG+ KVTWVE
Sbjct: 459 FSKQLADGVWAVVDVSADELMRDQGITSASSTANMNCRRLPSGCVLQDTPNGFVKVTWVE 518

Query: 464 HVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMAT-NIPTGEVGVITNQD 522
           H E D+  VH LY+ L+ +G A GA RW+ATL RQCE LA +M++  +P  +   I + +
Sbjct: 519 HTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLALLMSSIALPENDSSAI-HPE 577

Query: 523 GRKSMLKLAERMVISFCAGVSASTAHTWTTLSG-TG--ADDVRVMTRKSVDDPGRPPGIV 579
           G++SMLKLA RM  +FCAGVS S+   W+ L G TG   +DV VM RKSVD+PG P G+V
Sbjct: 578 GKRSMLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIGEDVHVMARKSVDEPGTPXGVV 637

Query: 580 LSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVN 639
           LSAATS W+PV P+R+F+FL ++  R+EWD LSNGG +QE+  IA G+  GN V LL+ +
Sbjct: 638 LSAATSVWMPVMPERLFNFLHNKGLRAEWDXLSNGGPMQEVTSIAKGQQNGNTVCLLKAS 697

Query: 640 CLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 699
                   Q++MLILQE+C D + S V+YAPVDI AM++V++GGD   VALLPSGFAILP
Sbjct: 698 ---PTKDKQNSMLILQETCADASGSMVVYAPVDIPAMHLVMSGGDSSCVALLPSGFAILP 754

Query: 700 DGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
            G S+ GA+      GGSLLTVAFQIL +S P+AKL++ SV TV+NLI+CT+++IK +L 
Sbjct: 755 AGPSI-GAD---HKMGGSLLTVAFQILANSQPSAKLTVESVETVSNLISCTIKKIKTALH 810

Query: 760 CE 761
           C+
Sbjct: 811 CD 812


>gi|51872287|gb|AAU12247.1| homeodomain protein HOX3 [Gossypium hirsutum]
          Length = 713

 Score =  712 bits (1838), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/708 (51%), Positives = 486/708 (68%), Gaps = 41/708 (5%)

Query: 83  DQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKR 142
           D      +KK YHRHT HQIQ +E+ FKECPHPD+KQR +LSRELGL P Q+KFWFQN+R
Sbjct: 20  DSSDLSRRKKPYHRHTAHQIQRLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRR 79

Query: 143 TQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLE 202
           TQMK QHER +N+ LR EN+K+R +N+  REAL N  CP+CGGP A  +  FD+  +R+E
Sbjct: 80  TQMKAQHERADNSALRAENDKIRCENIAIREALKNVICPSCGGPPANEDSYFDDQKMRME 139

Query: 203 NARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAA 262
           NA+L+EE+DR+S+IAAKY+G+P+   P +  PV    L+  + +F    G+G G      
Sbjct: 140 NAQLKEELDRVSSIAAKYIGRPISQLPPVQ-PVHISSLDFRMASFDGY-GVGAGPSLD-L 196

Query: 263 DLL--RSISAP---------TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAV 311
           DLL   S S P         ++ DK ++ ++A  AMEEL+R+ Q  EPLW+ S +     
Sbjct: 197 DLLPGSSSSMPNLPFQPVVISDIDKSLMSDIAANAMEELLRLLQTNEPLWIKSTNDGKDA 256

Query: 312 LNEDEYVRTFPRGIGPKPTGFK-----CEASRETAVVIMNHISLVEILMDVNQWSTVFSG 366
           LN + Y R FP+   P  T FK      EASR++ VVIMN ++LV++ MD N+W  +F  
Sbjct: 257 LNLESYERIFPK---PNNTHFKSPNIRVEASRDSGVVIMNGLALVDMFMDSNKWLELFPT 313

Query: 367 IVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVD 426
           IVS A T+EV+S G+ G +  +LQ+M  E QV SPLVPTRE Y +RYC+Q  +G WA+V+
Sbjct: 314 IVSIAKTIEVISPGMLGTHRCSLQLMYEELQVLSPLVPTREFYTLRYCQQIEQGLWAIVN 373

Query: 427 VSLDNLRPSPAVRCR--RRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLYKQLVSTG 483
           VS D   P  A +CR  R PSGCLIQ+MPNGYSKVTW+E VE++D+  +H LY+ LV +G
Sbjct: 374 VSYD--LPQFASQCRSHRLPSGCLIQDMPNGYSKVTWLERVEIEDKTPIHRLYRDLVHSG 431

Query: 484 NAFGAKRWVATLDRQCERLASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVISFCAGV 542
           +AFGA+RW+ TL R CE  A +  ++  T ++ GVI + +GR+SM+KLA+RMV +FC  V
Sbjct: 432 SAFGAERWLTTLQRMCEWFACLRVSSTSTRDLGGVIPSPEGRRSMMKLAQRMVNNFCTSV 491

Query: 543 SASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDE 602
             S +H  TTLSG+    VRV   KS  DPG+P GIVLSAAT+FWLPV P+ VF+F +DE
Sbjct: 492 GTSNSHRSTTLSGSNEVGVRVTVHKS-SDPGQPNGIVLSAATTFWLPVSPQNVFNFFKDE 550

Query: 603 NTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPT 662
            TR +WD+LSNG  VQE+AHIANG   GNC+S+LR     + N+S +NMLILQESC D +
Sbjct: 551 RTRPQWDVLSNGNAVQEVAHIANGSHPGNCISVLR-----AFNTSHNNMLILQESCIDSS 605

Query: 663 ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEA-------ASG 715
            S V+Y PVD+ A+NV ++G DP Y+ LLPSGF I PDG    G     +       +SG
Sbjct: 606 GSLVVYCPVDLPAINVAMSGEDPSYIPLLPSGFTITPDGHLEQGDGASTSSSTGHGRSSG 665

Query: 716 GSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
           GSL+TVAFQILV S+P+AKL+L SV  VNNLIA TV++IKA+L+C S+
Sbjct: 666 GSLITVAFQILVSSLPSAKLNLDSVTIVNNLIANTVQQIKAALNCPSS 713


>gi|356511234|ref|XP_003524332.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 713

 Score =  711 bits (1835), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/718 (49%), Positives = 490/718 (68%), Gaps = 40/718 (5%)

Query: 72  GSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
           GS++     G D ++R   +KRYHRHT +QIQ +E+ FKECPHPD+KQR +LSRELGL P
Sbjct: 5   GSQSPGEQDGSDSQER---RKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSRELGLAP 61

Query: 132 LQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGE 191
            Q+KFWFQN+RTQMK QHER +N  LR +N+K+R +N+  REAL N  CP+CGGP    +
Sbjct: 62  RQIKFWFQNRRTQMKAQHERADNCALRADNDKIRCENIAIREALKNVICPSCGGPPLNDD 121

Query: 192 MSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQP 251
             F++H LRLENA L+EE+DR+S+IAAKY+G+P+   P +  P+    L+L++ +FG Q 
Sbjct: 122 SYFNDHKLRLENAHLKEELDRVSSIAAKYIGRPISQLPPVQ-PIHISSLDLSMASFGNQG 180

Query: 252 GIG-------------GGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGE 298
            +G              G      +L       ++ DK ++ ++A  AMEE +R+ Q  E
Sbjct: 181 MVGPAPAPSLNLDLLPAGTSSSMPNLPYQPPCLSDMDKSLMSDIASNAMEEFLRLVQTNE 240

Query: 299 PLWMTSLDGTAAVLNEDEYVRTFPR-GIGPKPTGFKCEASRETAVVIMNHISLVEILMDV 357
           PLW+ S      VL+ D Y R F +     K    + EASR++ VV++N ++LV++ MD 
Sbjct: 241 PLWLKSNVDRRDVLSSDAYDRMFSKPNTRSKNPNVRIEASRDSGVVLLNSLALVDMFMDP 300

Query: 358 NQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQH 417
           N+W  +F  IVS A T++V+S+GV G+ +G+LQ+M  E QV SPLV TRE Y++RYC+Q 
Sbjct: 301 NKWIQLFPTIVSVARTIQVISSGVMGSCSGSLQLMYQELQVLSPLVSTREFYFLRYCQQI 360

Query: 418 GEGTWAVVDVSLDNLRPS---PAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV-H 473
            +GTWAV+DVS D  + S   P  R  R PSGCLIQ+MP+G+SK+TW+EHVE++D+ + H
Sbjct: 361 EQGTWAVMDVSYDFPQDSHFAPQFRSHRCPSGCLIQDMPDGHSKITWIEHVEIEDKTLPH 420

Query: 474 NLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEV--GVITNQDGRKSMLKLA 531
            LY+ L+ +G AFGA+RW+ TL R CER   +MAT+ PT +   GVI++ +G++SM+KLA
Sbjct: 421 RLYRNLIYSGMAFGAERWLTTLQRMCERFTYLMATSNPTRDNLGGVISSPEGKRSMMKLA 480

Query: 532 ERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVP 591
           +RMV  FCA +S S+ H WTTLSG     VRV   KS  DPG+P G+VLSAAT+ WLP P
Sbjct: 481 QRMVTDFCASISTSSGHRWTTLSGLNEIVVRVTVHKS-SDPGQPNGVVLSAATTIWLPTP 539

Query: 592 PKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNM 651
           P  VF+F +DEN R +WD+LSNG  VQE+A+IANG   GNC+S+LR     + N+SQ NM
Sbjct: 540 PHTVFNFFKDENKRPQWDVLSNGNAVQEVANIANGLHPGNCISVLR-----AFNNSQ-NM 593

Query: 652 LILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG---------T 702
           LILQESC D   S V+Y PVD+ ++N  ++G DP Y+ LLP+GF ILPDG         +
Sbjct: 594 LILQESCIDSYGSLVVYCPVDLPSINTAVSGEDPSYIPLLPNGFTILPDGQPDQEGDGAS 653

Query: 703 SLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
           +    N   A SGGSL+T+AFQILV S+P+AK+++ SV TVNNLI  TV++IK+SLSC
Sbjct: 654 TSSNTNRNIARSGGSLVTIAFQILVSSLPSAKVNMESVTTVNNLIGSTVQQIKSSLSC 711


>gi|255574032|ref|XP_002527933.1| homeobox protein, putative [Ricinus communis]
 gi|223532666|gb|EEF34449.1| homeobox protein, putative [Ricinus communis]
          Length = 713

 Score =  711 bits (1834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/693 (51%), Positives = 480/693 (69%), Gaps = 36/693 (5%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +KKRYHRHT +Q+Q++E+ FKECPHPD+KQR +LSRELGL   Q+KFWFQN+RTQMK QH
Sbjct: 32  RKKRYHRHTANQVQKLESMFKECPHPDEKQRLQLSRELGLTQRQIKFWFQNRRTQMKAQH 91

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREE 209
           ER +N  LR EN+K+R +N+  REAL N  CP+CGGP    +  FDEH LR+EN++L+EE
Sbjct: 92  ERADNCALRAENDKIRCENIAIREALKNVICPSCGGPPVTEDSYFDEHKLRMENSQLKEE 151

Query: 210 IDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSIS 269
           +DR+S+IAAKY+G+P+ + P      P +P+ ++  +       G G    + DL   + 
Sbjct: 152 LDRVSSIAAKYIGRPISHLP------PVQPIHISSLDLSMGSFGGQGIGGPSLDLDLDLI 205

Query: 270 APT-----------EADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYV 318
             T           + DK ++ ++A  AM+EL+R+ Q  EPLWM S      VL+ D Y 
Sbjct: 206 PSTSTLPFHPLGISDMDKSLMSDIAANAMDELLRLLQTNEPLWMKSSTDYRDVLHLDTYQ 265

Query: 319 RTFPRGIGP-KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVL 377
             FPR I   K    + EASR++ VVIMN ++LV++ MD N+W  +F  IVS +  LEV+
Sbjct: 266 SIFPRPISRLKNPNVRIEASRDSGVVIMNSLALVDMFMDANKWVELFPTIVSISKPLEVI 325

Query: 378 STGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA 437
           S+G+ G+++G+L +M  E QV SPLVPTRE Y +RYC+Q  +G WA+V+VS D  + S  
Sbjct: 326 SSGMMGSHSGSLHLMYEELQVLSPLVPTREFYILRYCQQIEQGLWAIVNVSYDIQQFSSQ 385

Query: 438 VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLYKQLVSTGNAFGAKRWVATLD 496
            R  R PSGCLIQ+MPNGYSKVTWVEHVEV+D+   H LY+ L+ +G AFGA+RW+ATL 
Sbjct: 386 CRSHRLPSGCLIQDMPNGYSKVTWVEHVEVEDKNPTHRLYRDLIHSGMAFGAERWLATLQ 445

Query: 497 RQCERLASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSG 555
           R CER A +M +   T ++ GVI + DG++SM+KLA+RM  SFC+ +S S +H WT +SG
Sbjct: 446 RMCERFACLMVSGNLTRDLGGVIPSPDGKRSMMKLAQRMANSFCSSISTSNSHRWTAISG 505

Query: 556 TGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGG 615
           +    VRV   KS  DPG+P G+VL+AAT+FWLPV P+ VF+F +DE TR++WD+LS+G 
Sbjct: 506 SNEVGVRV--HKST-DPGQPNGVVLNAATTFWLPVSPQNVFNFFKDERTRAQWDVLSSGN 562

Query: 616 VVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVA 675
            VQE+AHIANG   GNC+S+LR     + NS Q+NMLILQESC D + S V+Y PVD+ A
Sbjct: 563 AVQEVAHIANGSHPGNCISVLR-----AFNSGQNNMLILQESCIDSSGSLVVYCPVDLPA 617

Query: 676 MNVVLNGGDPDYVALLPSGFAILPDGTSLHG--------ANIGEAASGGSLLTVAFQILV 727
           +N+ ++G DP Y+ LLPSGF I PDG   HG        A+     S GSL+TV+FQILV
Sbjct: 618 INIAMSGEDPSYIPLLPSGFTICPDGRPDHGDGASTSSNAHGSMCRSSGSLITVSFQILV 677

Query: 728 DSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
            S+P+AKL++ SV TVNNLI  TV++IKA+++C
Sbjct: 678 SSLPSAKLNMESVTTVNNLINTTVQQIKAAMNC 710


>gi|222629392|gb|EEE61524.1| hypothetical protein OsJ_15826 [Oryza sativa Japonica Group]
          Length = 833

 Score =  710 bits (1833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/742 (50%), Positives = 498/742 (67%), Gaps = 79/742 (10%)

Query: 88  PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
           P +KKRYHRHT  QIQE+EA FKECPHPD+KQR ELS+ LGLEP QVKFWFQN+RTQMK 
Sbjct: 102 PKRKKRYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRLGLEPRQVKFWFQNRRTQMKM 161

Query: 148 QHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLR 207
           Q ERHEN+ L+ EN+KLR++N+  REA SNA C  CGGP  +GE+S +EHHLR+ENARL+
Sbjct: 162 QLERHENSLLKQENDKLRSENLSIREATSNAVCVGCGGPAMLGEVSLEEHHLRVENARLK 221

Query: 208 EEIDRISAIAAKYVGKPVVNYPLLSP-------PVPSRPLELAVGNFGAQP--------- 251
           +E+ R+ A+AAK++GK +    +++P       PVP   LELAVG  G+ P         
Sbjct: 222 DELSRVCALAAKFLGKSI---SVMAPPQMHQPHPVPGSSLELAVGGIGSMPSATMPISTI 278

Query: 252 ----GIGGGEMYGAADLLRSISAPTEA---DKPMIIELAVAAMEELIRMAQMGEPLWM-- 302
               G     M      ++S + P+     DK + +ELA++AM+EL++MAQMG+PLW+  
Sbjct: 279 TDFAGAMSSSMGTVITPMKSEAEPSAMAGIDKSLFLELAMSAMDELVKMAQMGDPLWIPG 338

Query: 303 TSLDGTAA--VLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNH-ISLVEILMDVNQ 359
            S+  + A   LN +EY+ TFP  IG KP G+  EASRE+ +VI++   +LVE LMD  +
Sbjct: 339 ASVPSSPAKESLNFEEYLNTFPPCIGVKPEGYVSEASRESGIVIIDDGAALVETLMDERR 398

Query: 360 WSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGE 419
           WS +FS ++++A T E +STGVAG+ NGAL +M AE QV SPLVP RE  ++R+ KQ  +
Sbjct: 399 WSDMFSCMIAKASTTEEISTGVAGSRNGALLLMQAELQVLSPLVPIREVKFLRFSKQLAD 458

Query: 420 GTWAVVDVSLDNLRPSPAV---------RCRRRPSGCLIQEMPNGYSK------------ 458
           G WAVVDVS D L     +          CRR PSGC++Q+ PNG+ K            
Sbjct: 459 GVWAVVDVSADELMRDQGITSASSTANMNCRRLPSGCVLQDTPNGFVKYLVQISVFSEVY 518

Query: 459 ---------------VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLA 503
                          VTWVEH E D+  VH LY+ L+ +G A GA RW+ATL RQCE LA
Sbjct: 519 NLSIDQFLDLPPAFMVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLA 578

Query: 504 SVMAT-NIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSG-TG--AD 559
            +M++  +P  +   I + +G++SMLKLA RM  +FCAGVS S+   W+ L G TG   +
Sbjct: 579 LLMSSIALPENDSSAI-HPEGKRSMLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIGE 637

Query: 560 DVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQE 619
           DV VM RKSVD+PG PPG+VLSAATS W+PV P+R+F+FL ++  R+EWDILSNGG +QE
Sbjct: 638 DVHVMARKSVDEPGTPPGVVLSAATSVWMPVMPERLFNFLHNKGLRAEWDILSNGGPMQE 697

Query: 620 MAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVV 679
           +  IA G+  GN V LL+ +        Q++MLILQE+C D + S V+YAPVDI AM++V
Sbjct: 698 VTSIAKGQQNGNTVCLLKAS---PTKDKQNSMLILQETCADASGSMVVYAPVDIPAMHLV 754

Query: 680 LNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGS 739
           ++GGD   VALLPSGFAILP G S+ GA+      GGSLLTVAFQIL +S P+AKL++ S
Sbjct: 755 MSGGDSSCVALLPSGFAILPAGPSI-GAD---HKMGGSLLTVAFQILANSQPSAKLTVES 810

Query: 740 VATVNNLIACTVERIKASLSCE 761
           V TV+NLI+CT+++IK +L C+
Sbjct: 811 VETVSNLISCTIKKIKTALHCD 832


>gi|218195394|gb|EEC77821.1| hypothetical protein OsI_17027 [Oryza sativa Indica Group]
          Length = 849

 Score =  710 bits (1832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/742 (50%), Positives = 498/742 (67%), Gaps = 79/742 (10%)

Query: 88  PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
           P +KKRYHRHT  QIQE+EA FKECPHPD+KQR ELS+ LGLEP QVKFWFQN+RTQMK 
Sbjct: 118 PKRKKRYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRLGLEPRQVKFWFQNRRTQMKM 177

Query: 148 QHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLR 207
           Q ERHEN+ L+ EN+KLR++N+  REA SNA C  CGGP  +GE+S +EHHLR+ENARL+
Sbjct: 178 QLERHENSLLKQENDKLRSENLSIREATSNAVCVGCGGPAMLGEVSLEEHHLRVENARLK 237

Query: 208 EEIDRISAIAAKYVGKPVVNYPLLSP-------PVPSRPLELAVGNFGAQP--------- 251
           +E+ R+ A+AAK++GK +    +++P       PVP   LELAVG  G+ P         
Sbjct: 238 DELSRVCALAAKFLGKSI---SVMAPPQMHQPHPVPGSSLELAVGGIGSMPSATMPISTI 294

Query: 252 ----GIGGGEMYGAADLLRSISAPTEA---DKPMIIELAVAAMEELIRMAQMGEPLWM-- 302
               G     M      ++S + P+     DK + +ELA++AM+EL++MAQMG+PLW+  
Sbjct: 295 TDFAGAMSSSMGTVITPMKSEAEPSAMAGIDKSLFLELAMSAMDELVKMAQMGDPLWIPG 354

Query: 303 TSLDGTAA--VLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNH-ISLVEILMDVNQ 359
            S+  + A   LN +EY+ TFP  IG KP G+  EASRE+ +VI++   +LVE LMD  +
Sbjct: 355 ASVPSSPAKESLNFEEYLNTFPPCIGVKPEGYVSEASRESGIVIIDDGAALVETLMDERR 414

Query: 360 WSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGE 419
           WS +FS ++++A T E +STGVAG+ NGAL +M AE QV SPLVP RE  ++R+ KQ  +
Sbjct: 415 WSDMFSCMIAKASTTEEISTGVAGSRNGALLLMQAELQVLSPLVPIREVKFLRFSKQLAD 474

Query: 420 GTWAVVDVSLDNLRPSPAV---------RCRRRPSGCLIQEMPNGYSK------------ 458
           G WAVVDVS D L     +          CRR PSGC++Q+ PNG+ K            
Sbjct: 475 GVWAVVDVSADELMRDQGITSASSTANMNCRRLPSGCVLQDTPNGFVKYLVQISVFSEVY 534

Query: 459 ---------------VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLA 503
                          VTWVEH E D+  VH LY+ L+ +G A GA RW+ATL RQCE LA
Sbjct: 535 NLSIDQFLDLPPAFMVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLA 594

Query: 504 SVMAT-NIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSG-TG--AD 559
            +M++  +P  +   I + +G++SMLKLA RM  +FCAGVS S+   W+ L G TG   +
Sbjct: 595 LLMSSIALPENDSSAI-HPEGKRSMLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIGE 653

Query: 560 DVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQE 619
           DV VM RKSVD+PG PPG+VLSAATS W+PV P+R+F+FL ++  R+EWDILSNGG +QE
Sbjct: 654 DVHVMARKSVDEPGTPPGVVLSAATSVWMPVMPERLFNFLHNKGLRAEWDILSNGGPMQE 713

Query: 620 MAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVV 679
           +  IA G+  GN V LL+ +        Q++MLILQE+C D + S V+YAPVDI AM++V
Sbjct: 714 VTSIAKGQQNGNTVCLLKAS---PTKDKQNSMLILQETCADASGSMVVYAPVDIPAMHLV 770

Query: 680 LNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGS 739
           ++GGD   VALLPSGFAILP G S+ GA+      GGSLLTVAFQIL +S P+AKL++ S
Sbjct: 771 MSGGDSSCVALLPSGFAILPAGPSI-GAD---HKMGGSLLTVAFQILANSQPSAKLTVES 826

Query: 740 VATVNNLIACTVERIKASLSCE 761
           V TV+NLI+CT+++IK +L C+
Sbjct: 827 VETVSNLISCTIKKIKTALHCD 848


>gi|357159529|ref|XP_003578475.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 1
           [Brachypodium distachyon]
          Length = 864

 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/782 (48%), Positives = 503/782 (64%), Gaps = 101/782 (12%)

Query: 60  RLREEEFDSTKSGSENHEGASGD----DQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHP 115
           R RE+E DS +SGS+N +GASGD    D      KKKRYHRHT  QIQE+EA FKECPHP
Sbjct: 93  RGREDENDS-RSGSDNLDGASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHP 151

Query: 116 DDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREAL 175
           D+KQR ELSR L LE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KLRA+NM  REA+
Sbjct: 152 DEKQRMELSRRLNLESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMTIREAM 211

Query: 176 SNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPV 235
            +  C NCGG   +GE+S +E HLR+EN+RL++E+DR+ ++A K++G+P+          
Sbjct: 212 RSPICGNCGGAAVLGEVSLEEQHLRIENSRLKDELDRVCSLAGKFLGRPISTI------- 264

Query: 236 PSRPLELAVG---NFGAQ--------------PGIGGGEMYGAADLLRSISAPTEA---- 274
            +  LE  +G    FGA               P + GG    A  L   IS   +A    
Sbjct: 265 -TSGLEFGIGATNGFGALGPLGGSSSSVLQSIPDLMGGSSAAAMRLPAGISGLDDAESAI 323

Query: 275 --DKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGF 332
             D+ +++EL +AAM+EL+++ Q+ +PLW+ SLD     LN DEY R FPR +   P GF
Sbjct: 324 AVDRGVLLELGLAAMDELVKVTQVDDPLWLPSLDSGFETLNNDEYRRAFPRVLAHSPAGF 383

Query: 333 KCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVM 392
             EA+RE  + I++   LV+ LMD  +W+ +F  +V+RA T +++S G+ G  +G++Q+M
Sbjct: 384 VSEATREVGLAIVSSAELVDSLMDAARWAEMFPCVVARASTTDIISGGMPGTRSGSIQLM 443

Query: 393 TAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN-LRPSPA---------VRCRR 442
            AE QV SPLVP RE  ++R+CKQH EG WAVVDVS D  LRP            + CR 
Sbjct: 444 HAELQVLSPLVPIREVTFLRFCKQHAEGLWAVVDVSADGVLRPDGGAGNGAAAGYMGCRL 503

Query: 443 RPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERL 502
            PSGC++++M NGY+KVTWV H E D+  VH+LY+ L+ +G A GA+RW+A+L RQC+ L
Sbjct: 504 LPSGCVVEDMRNGYAKVTWVVHAEYDETAVHHLYRPLLRSGQALGARRWLASLQRQCQYL 563

Query: 503 ASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLS-------- 554
           A +   ++P+ +   I+   GR+SMLKLA+RM  +FCAGV A+ A  W  L         
Sbjct: 564 AILRNNSLPSQDNQAISPV-GRRSMLKLAQRMADNFCAGVCATAAQKWRRLDEWRVEGAM 622

Query: 555 -------------GTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLR 600
                        G G  +VR+M R SV  PG PPG+VLSA TS  LP  PP+RVFD+LR
Sbjct: 623 PGGGDQQQHQAGGGDGDKEVRMMARHSVGAPGEPPGVVLSATTSVRLPGTPPQRVFDYLR 682

Query: 601 DENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTD 660
           DE  R EWDIL+NG  +QEM HIA G+  GN VSLLR N   + + +Q+NMLILQE+CTD
Sbjct: 683 DEQRRGEWDILANGEAMQEMDHIAKGQLHGNAVSLLRPN---ATSGNQNNMLILQETCTD 739

Query: 661 PTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG------------------- 701
            + S V+YAPVD+ +M++V+NGGD  YV+LLPSGFAILPDG                   
Sbjct: 740 SSGSLVVYAPVDVQSMHIVMNGGDSAYVSLLPSGFAILPDGHNTPPGAVVDPAGSSQQSQ 799

Query: 702 -----TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKA 756
                ++ HG N     + GSL+TVAFQILV+++PTAKL++ SV TV+NL++CT+++IK+
Sbjct: 800 QGSSESAAHGNN-----NTGSLVTVAFQILVNNLPTAKLTVESVDTVSNLLSCTIQKIKS 854

Query: 757 SL 758
           +L
Sbjct: 855 AL 856


>gi|357159535|ref|XP_003578477.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 3
           [Brachypodium distachyon]
          Length = 858

 Score =  704 bits (1817), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/783 (48%), Positives = 503/783 (64%), Gaps = 102/783 (13%)

Query: 60  RLREEEFDSTKSGSENHEGASGD----DQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHP 115
           R RE+E DS +SGS+N +GASGD    D      KKKRYHRHT  QIQE+EA FKECPHP
Sbjct: 86  RGREDENDS-RSGSDNLDGASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHP 144

Query: 116 DDKQRKELSRELGLEPLQVKFWFQNKRTQMK-TQHERHENTQLRTENEKLRADNMRYREA 174
           D+KQR ELSR L LE  QVKFWFQN+RTQMK TQ ERHEN  LR EN+KLRA+NM  REA
Sbjct: 145 DEKQRMELSRRLNLESRQVKFWFQNRRTQMKQTQIERHENALLRQENDKLRAENMTIREA 204

Query: 175 LSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPP 234
           + +  C NCGG   +GE+S +E HLR+EN+RL++E+DR+ ++A K++G+P+         
Sbjct: 205 MRSPICGNCGGAAVLGEVSLEEQHLRIENSRLKDELDRVCSLAGKFLGRPISTI------ 258

Query: 235 VPSRPLELAVG---NFGAQ--------------PGIGGGEMYGAADLLRSISAPTEA--- 274
             +  LE  +G    FGA               P + GG    A  L   IS   +A   
Sbjct: 259 --TSGLEFGIGATNGFGALGPLGGSSSSVLQSIPDLMGGSSAAAMRLPAGISGLDDAESA 316

Query: 275 ---DKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTG 331
              D+ +++EL +AAM+EL+++ Q+ +PLW+ SLD     LN DEY R FPR +   P G
Sbjct: 317 IAVDRGVLLELGLAAMDELVKVTQVDDPLWLPSLDSGFETLNNDEYRRAFPRVLAHSPAG 376

Query: 332 FKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQV 391
           F  EA+RE  + I++   LV+ LMD  +W+ +F  +V+RA T +++S G+ G  +G++Q+
Sbjct: 377 FVSEATREVGLAIVSSAELVDSLMDAARWAEMFPCVVARASTTDIISGGMPGTRSGSIQL 436

Query: 392 MTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN-LRPSPA---------VRCR 441
           M AE QV SPLVP RE  ++R+CKQH EG WAVVDVS D  LRP            + CR
Sbjct: 437 MHAELQVLSPLVPIREVTFLRFCKQHAEGLWAVVDVSADGVLRPDGGAGNGAAAGYMGCR 496

Query: 442 RRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCER 501
             PSGC++++M NGY+KVTWV H E D+  VH+LY+ L+ +G A GA+RW+A+L RQC+ 
Sbjct: 497 LLPSGCVVEDMRNGYAKVTWVVHAEYDETAVHHLYRPLLRSGQALGARRWLASLQRQCQY 556

Query: 502 LASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLS------- 554
           LA +   ++P+ +   I+   GR+SMLKLA+RM  +FCAGV A+ A  W  L        
Sbjct: 557 LAILRNNSLPSQDNQAISPV-GRRSMLKLAQRMADNFCAGVCATAAQKWRRLDEWRVEGA 615

Query: 555 --------------GTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFL 599
                         G G  +VR+M R SV  PG PPG+VLSA TS  LP  PP+RVFD+L
Sbjct: 616 MPGGGDQQQHQAGGGDGDKEVRMMARHSVGAPGEPPGVVLSATTSVRLPGTPPQRVFDYL 675

Query: 600 RDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCT 659
           RDE  R EWDIL+NG  +QEM HIA G+  GN VSLLR N   + + +Q+NMLILQE+CT
Sbjct: 676 RDEQRRGEWDILANGEAMQEMDHIAKGQLHGNAVSLLRPN---ATSGNQNNMLILQETCT 732

Query: 660 DPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG------------------ 701
           D + S V+YAPVD+ +M++V+NGGD  YV+LLPSGFAILPDG                  
Sbjct: 733 DSSGSLVVYAPVDVQSMHIVMNGGDSAYVSLLPSGFAILPDGHNTPPGAVVDPAGSSQQS 792

Query: 702 ------TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIK 755
                 ++ HG N     + GSL+TVAFQILV+++PTAKL++ SV TV+NL++CT+++IK
Sbjct: 793 QQGSSESAAHGNN-----NTGSLVTVAFQILVNNLPTAKLTVESVDTVSNLLSCTIQKIK 847

Query: 756 ASL 758
           ++L
Sbjct: 848 SAL 850


>gi|357159532|ref|XP_003578476.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 2
           [Brachypodium distachyon]
          Length = 777

 Score =  701 bits (1809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/770 (47%), Positives = 494/770 (64%), Gaps = 100/770 (12%)

Query: 72  GSENHEGASGD----DQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL 127
           GS+N +GASGD    D      KKKRYHRHT  QIQE+EA FKECPHPD+KQR ELSR L
Sbjct: 17  GSDNLDGASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL 76

Query: 128 GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPT 187
            LE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KLRA+NM  REA+ +  C NCGG  
Sbjct: 77  NLESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMTIREAMRSPICGNCGGAA 136

Query: 188 AIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVG-- 245
            +GE+S +E HLR+EN+RL++E+DR+ ++A K++G+P+           +  LE  +G  
Sbjct: 137 VLGEVSLEEQHLRIENSRLKDELDRVCSLAGKFLGRPISTI--------TSGLEFGIGAT 188

Query: 246 -NFGAQ--------------PGIGGGEMYGAADLLRSISAPTEA------DKPMIIELAV 284
             FGA               P + GG    A  L   IS   +A      D+ +++EL +
Sbjct: 189 NGFGALGPLGGSSSSVLQSIPDLMGGSSAAAMRLPAGISGLDDAESAIAVDRGVLLELGL 248

Query: 285 AAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVI 344
           AAM+EL+++ Q+ +PLW+ SLD     LN DEY R FPR +   P GF  EA+RE  + I
Sbjct: 249 AAMDELVKVTQVDDPLWLPSLDSGFETLNNDEYRRAFPRVLAHSPAGFVSEATREVGLAI 308

Query: 345 MNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVP 404
           ++   LV+ LMD  +W+ +F  +V+RA T +++S G+ G  +G++Q+M AE QV SPLVP
Sbjct: 309 VSSAELVDSLMDAARWAEMFPCVVARASTTDIISGGMPGTRSGSIQLMHAELQVLSPLVP 368

Query: 405 TRESYYVRYCKQHGEGTWAVVDVSLDN-LRPSPA---------VRCRRRPSGCLIQEMPN 454
            RE  ++R+CKQH EG WAVVDVS D  LRP            + CR  PSGC++++M N
Sbjct: 369 IREVTFLRFCKQHAEGLWAVVDVSADGVLRPDGGAGNGAAAGYMGCRLLPSGCVVEDMRN 428

Query: 455 GYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGE 514
           GY+KVTWV H E D+  VH+LY+ L+ +G A GA+RW+A+L RQC+ LA +   ++P+ +
Sbjct: 429 GYAKVTWVVHAEYDETAVHHLYRPLLRSGQALGARRWLASLQRQCQYLAILRNNSLPSQD 488

Query: 515 VGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLS-------------------- 554
              I+   GR+SMLKLA+RM  +FCAGV A+ A  W  L                     
Sbjct: 489 NQAISPV-GRRSMLKLAQRMADNFCAGVCATAAQKWRRLDEWRVEGAMPGGGDQQQHQAG 547

Query: 555 -GTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEWDILS 612
            G G  +VR+M R SV  PG PPG+VLSA TS  LP  PP+RVFD+LRDE  R EWDIL+
Sbjct: 548 GGDGDKEVRMMARHSVGAPGEPPGVVLSATTSVRLPGTPPQRVFDYLRDEQRRGEWDILA 607

Query: 613 NGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVD 672
           NG  +QEM HIA G+  GN VSLLR N   + + +Q+NMLILQE+CTD + S V+YAPVD
Sbjct: 608 NGEAMQEMDHIAKGQLHGNAVSLLRPN---ATSGNQNNMLILQETCTDSSGSLVVYAPVD 664

Query: 673 IVAMNVVLNGGDPDYVALLPSGFAILPDG------------------------TSLHGAN 708
           + +M++V+NGGD  YV+LLPSGFAILPDG                        ++ HG N
Sbjct: 665 VQSMHIVMNGGDSAYVSLLPSGFAILPDGHNTPPGAVVDPAGSSQQSQQGSSESAAHGNN 724

Query: 709 IGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
                + GSL+TVAFQILV+++PTAKL++ SV TV+NL++CT+++IK++L
Sbjct: 725 -----NTGSLVTVAFQILVNNLPTAKLTVESVDTVSNLLSCTIQKIKSAL 769


>gi|326523973|dbj|BAJ96997.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 774

 Score =  699 bits (1803), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/754 (48%), Positives = 496/754 (65%), Gaps = 71/754 (9%)

Query: 70  KSGSENHEGASGDDQE---QRP-NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
           + GS+N +GASGDD +     P  KKKRYHRHT  QIQE+EA FKECPHPD+KQR ELSR
Sbjct: 20  RPGSDNLDGASGDDLDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSR 79

Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGG 185
            L LE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KLR +NM  REA+ + +C NCGG
Sbjct: 80  RLNLESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRTENMTIREAMRSPTCGNCGG 139

Query: 186 PTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPV--VNYPLLSPPVPSRPLELA 243
              +GE+S +E HLR+EN+RL++E+DR+ A+A K++G+PV  ++ PL  P      L+LA
Sbjct: 140 AAVLGEVSLEEQHLRIENSRLKDELDRVCALAGKFLGRPVSAISSPLSLPSSLCSGLDLA 199

Query: 244 VGNFGAQPGIGGGEMYGAADLLRSISAP--------------------TEADKPMIIELA 283
           VG+     G+G   M    DL+   SA                        D+  ++EL 
Sbjct: 200 VGSNNGFMGMG---MQSIPDLMGGGSAAMRLPAGMMGGGLDDGLGGEGVSIDRGALLELG 256

Query: 284 VAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVV 343
           +AAMEEL+++ Q+ +PLW  SL+     LN DEY R F R +GP P G+  EA+RE  + 
Sbjct: 257 LAAMEELVKVTQVDDPLWQPSLEIGIETLNYDEYRRAFARVLGPSPAGYVSEATREVGIA 316

Query: 344 IMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLV 403
           I+N + LV  LM+  +WS +F  +V+RA T+E++S+G+ G  +G++Q+M AE QV SPLV
Sbjct: 317 IINSVDLVNSLMNEARWSEMFPCVVARASTMEIISSGMGGTRSGSIQLMRAELQVLSPLV 376

Query: 404 PTRESYYVRYCKQHGEGTWAVVDVSLDN-LRPSPA---------VRCRRRPSGCLIQEMP 453
           P RE  ++R+CKQH +G WA+VDVS+D  LRP            + CR  PSGC++++M 
Sbjct: 377 PIREVTFLRFCKQHADGLWAIVDVSVDGVLRPDSGAGGAGPAGYMGCRLLPSGCIVEDMQ 436

Query: 454 NGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPT- 512
           NGY+KVTWV H E D+  VH LY+ L+ +G A GA+RW+A+L RQCE  A + +   P  
Sbjct: 437 NGYAKVTWVVHAEYDEAAVHELYRPLLRSGQALGARRWLASLQRQCEYHAILCSNPHPNH 496

Query: 513 GEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTL-------------SGTGAD 559
           G+     +  GR+ ML+LA+RM  +FCAGV A+ A  W  L             +  G D
Sbjct: 497 GDRHEAISPAGRRCMLRLAQRMADNFCAGVCATAAQKWRRLDEWRVEGAGGREQASGGED 556

Query: 560 DVRVMTRKSVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEWDILSNGGVVQ 618
            VR+M R+SV  PG PPG+VLSA TS  LP   P+RVFD+LRDE  R EWDIL+NG  +Q
Sbjct: 557 KVRMMARQSVGAPGEPPGVVLSATTSVRLPGTSPQRVFDYLRDEQRRGEWDILANGEAMQ 616

Query: 619 EMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNV 678
           EM HIA G+  GN VSLLR N   + + +Q+NMLILQE+CTD + S V+YAPVD+ +M+V
Sbjct: 617 EMDHIAKGQHHGNAVSLLRPN---ATSGNQNNMLILQETCTDASGSLVVYAPVDVQSMHV 673

Query: 679 VLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASG--------------GSLLTVAFQ 724
           V+ GGD  YV+LLPSGFAILPDG ++  A +  +  G              GSL+TVAFQ
Sbjct: 674 VMGGGDSAYVSLLPSGFAILPDGHTMQAAPLDPSPQGSSPIAHGGGSNNNPGSLVTVAFQ 733

Query: 725 ILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           ILV+++PTAKL++ SV TV+NL++CT+++IK++L
Sbjct: 734 ILVNNLPTAKLTVESVDTVSNLLSCTIQKIKSAL 767


>gi|3925363|gb|AAC79430.1| homeodomain protein [Malus x domestica]
          Length = 653

 Score =  692 bits (1786), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/660 (54%), Positives = 461/660 (69%), Gaps = 48/660 (7%)

Query: 144 QMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLEN 203
           Q+KTQ E HEN+ LR EN KLRA+NM  REA+ N  C NCGGP  IG++S +E HLR+EN
Sbjct: 1   QIKTQLEPHENSLLRQENNKLRAENMSIREAMRNPICSNCGGPAIIGDISLEEQHLRIEN 60

Query: 204 ARLREEIDRISAIAAKYVGKPVVNY-PLLSPPVPSRPLELAVGN--FGAQPGI------- 253
           ARL++++DR+ A+A K++G+P+ +    + PP+PS  LEL VG+  FG    +       
Sbjct: 61  ARLKDDLDRVCALAGKFLGRPISSLGASMGPPLPSSTLELGVGSNGFGGMSNVATSMSMG 120

Query: 254 ---GGGEMYGAADLLRSISAPT------EADKPMIIELAVAAMEELIRMAQMGEPLWMTS 304
              GGG   G+A  + S   P+        ++ + +ELA+AAM+EL++MAQ  EPLW+ S
Sbjct: 121 NDFGGG--IGSAMSVVSHGRPSVTGLDRSMERSIFLELALAAMDELVKMAQTDEPLWLRS 178

Query: 305 LDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVF 364
           L+G   VLN +EY+R F   IG KP GF  EASRE+  VI+N ++LVE LMD N+W  +F
Sbjct: 179 LEGGREVLNHEEYMRNFTPCIGLKPNGFVSEASRESGTVIINSLTLVETLMDSNRWLEMF 238

Query: 365 SGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAV 424
            G+++R  T +V+S+G+ G  NGALQ+M AE QV SPLVP RE  ++R+CKQH EG WAV
Sbjct: 239 PGVLARTSTTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAV 298

Query: 425 VDVSLDNLRPSPAV----RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLV 480
           VDVS+D +R +  V     CR  PSGC++Q+MPNGYSKVTWVEH E D+  VH+LY+ L+
Sbjct: 299 VDVSVDAIRDTTGVPTFMNCRTLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHHLYRPLL 358

Query: 481 STGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCA 540
           S+G  FGA+RWV+TL RQ E  A +M++ + + +   IT   GR+SMLKLA+RM  +FCA
Sbjct: 359 SSGMGFGAQRWVSTLQRQSECQAILMSSCVTSRDHTAIT-ASGRRSMLKLAQRMTDNFCA 417

Query: 541 GVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFL 599
           GV AST H WT L+    D DVRVMTR+S+  PG PPG+VLSAATS WLP  P+R+FDFL
Sbjct: 418 GVCASTVHKWTKLNAGNVDEDVRVMTRESLYHPGEPPGVVLSAATSVWLPFSPQRLFDFL 477

Query: 600 RDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCT 659
           RDE  RSEWDILSNGG +QEMAHIA G+D GNCVSLLR      AN++Q +MLILQE+C 
Sbjct: 478 RDERLRSEWDILSNGGPMQEMAHIAKGQDPGNCVSLLRAR----ANANQGSMLILQETCI 533

Query: 660 DPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHG------------- 706
           D   S V+YAPVDI AM+VV+NGGD  YVALLPSGFAI+PDG    G             
Sbjct: 534 DAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGPMFGKGGSHGSGN 593

Query: 707 ----ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
                + G     GSLLT+ FQILV+S+PTAKL++ SV TVN+LI+CTV++IKA+L CES
Sbjct: 594 SGGGVDDGGHRVSGSLLTMTFQILVNSLPTAKLTVESVETVNHLISCTVQKIKAALHCES 653


>gi|356529261|ref|XP_003533214.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 771

 Score =  688 bits (1775), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/735 (50%), Positives = 512/735 (69%), Gaps = 41/735 (5%)

Query: 58  IARLREEEFDSTKSGSENHEGASGDDQE----QRPNKKKRYHRHTQHQIQEMEAFFKECP 113
           + RLR++E++S +SGS+N +G SGDDQ+    Q   KKK+YHRHT  QIQE+EAFFKECP
Sbjct: 41  LGRLRDDEYES-RSGSDNFDGGSGDDQDAGDDQPHKKKKKYHRHTPQQIQELEAFFKECP 99

Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYRE 173
           HPD+KQR +LS+ LGLE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KLRA+N   ++
Sbjct: 100 HPDEKQRTDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENMILRQENDKLRAENSVMKD 159

Query: 174 ALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSP 233
           AL+N +C NCGGP   G++S +EH  R+ENARL++E++RI A+A K++G+P+   PL SP
Sbjct: 160 ALANPTCNNCGGPAIPGQISLEEHQTRMENARLKDELNRICALANKFLGRPL--SPLASP 217

Query: 234 ---PVPSRPLELAVG--------NFGAQPGIG---GGEMYGAADLLRSISAPT------- 272
              P  +  LELA+G        NFG    +G   G  + G++  + S+ A +       
Sbjct: 218 MALPPSNSGLELAIGRNGIGGPSNFGMSLPMGFDVGDGVMGSSPGMSSMGARSPMGMMGN 277

Query: 273 --EADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPT 330
             + ++ M+++LA+ AM ELI+MAQ    LW+ S DG   VLN DEY R F   +G KP 
Sbjct: 278 EIQLERSMLLDLALNAMNELIKMAQPDTSLWIKSSDGRNEVLNHDEYARLFSPYVGSKPA 337

Query: 331 GFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ 390
           G+  EA+R T VV  + + +VE LMDV++W+ +FS +++ A TLEVLS+G+  + +GALQ
Sbjct: 338 GYVTEATRGTGVVPASSLGIVETLMDVDRWAEMFSSMIASAATLEVLSSGMGESRSGALQ 397

Query: 391 VMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR----PSPAVRCRRRPSG 446
           VM AE Q+ SPLVP R   ++RY KQHGEG WAVVDVS+D  R      P + CRR PSG
Sbjct: 398 VMLAEVQLLSPLVPARSLSFLRYSKQHGEGVWAVVDVSVDIGRNVTNSHPLMSCRRLPSG 457

Query: 447 CLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVM 506
           C+IQ+MPNG+SK+TWVEH + D+  VH LY+ LVS+G  FGA+RW+ATL RQC+ LA ++
Sbjct: 458 CVIQDMPNGFSKITWVEHSQYDESVVHQLYRPLVSSGIGFGAQRWIATLLRQCDCLA-IL 516

Query: 507 ATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLS-GTGADDVRVMT 565
            + IP+ +  VI+  +G+K+MLKLA+RM   FC+G+ AS+   W  L+ G  ADD+R+M 
Sbjct: 517 MSQIPSEDPTVIS-LEGKKNMLKLAQRMTEYFCSGICASSVRKWEILNIGNLADDMRIMA 575

Query: 566 RK-SVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIA 624
           RK ++DDP   PGIVLSA+TS W+PV  +RVFDFLRDEN R EWD+LS  G ++EM HIA
Sbjct: 576 RKINMDDPTEAPGIVLSASTSVWMPVSRQRVFDFLRDENLRGEWDMLSKDGPMKEMLHIA 635

Query: 625 NGRDTGNCVSLLRVNCL-QSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGG 683
            G+D GNCVS+L V+ +      ++ N+L LQES TD + S V+Y+P+++ A+N+V+N G
Sbjct: 636 KGQDRGNCVSILHVSAIFHHILCNECNVLYLQESWTDASGSLVVYSPINMQALNMVMNCG 695

Query: 684 DPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATV 743
           D  +VAL PSGFAILPDG S +G       S   LLTV  Q+L +   + K ++ SV TV
Sbjct: 696 DSSFVALRPSGFAILPDGASNNGDGSDGGGS--CLLTVGLQMLPNGDQSTKFTMESVVTV 753

Query: 744 NNLIACTVERIKASL 758
           N+LI+ T++++K +L
Sbjct: 754 NSLISNTIQKVKDAL 768


>gi|224118060|ref|XP_002317722.1| predicted protein [Populus trichocarpa]
 gi|222858395|gb|EEE95942.1| predicted protein [Populus trichocarpa]
          Length = 711

 Score =  687 bits (1772), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/690 (51%), Positives = 478/690 (69%), Gaps = 26/690 (3%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +KKRYHRHT HQIQ++E+ FKE PHPD+KQR +LSRELGL P Q+KFWFQN+RTQMK QH
Sbjct: 26  RKKRYHRHTAHQIQKLESMFKEFPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMKAQH 85

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREE 209
           ER +N+ LR EN+K+R +N+  REAL N  CP+CG P    +  FDE  LR+ENA+L+EE
Sbjct: 86  ERADNSSLRAENDKIRCENIAIREALKNVICPSCGAPPVTEDSYFDEQKLRIENAQLKEE 145

Query: 210 IDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGA-------- 261
           +DR+S+IAAKY+G+P+   P +  PV    L+L++GNFG Q   G               
Sbjct: 146 LDRVSSIAAKYIGRPISQLPPVQ-PVHISSLDLSMGNFGGQGLGGPALDLDLDLDLIPTN 204

Query: 262 ADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF 321
           ++L       ++ DK ++ ++A  AMEEL+R+ Q  E LWM S      VLN D Y R F
Sbjct: 205 SNLAFQPPGISDMDKSLMTDVATNAMEELLRLLQANESLWMKSSTDGRDVLNLDSYQRIF 264

Query: 322 PRGIGP-KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTG 380
           PR +   K    + E+SR++ VVIMN ++LV++ MD N+W   F  IVS A T+EV+S+G
Sbjct: 265 PRAMSHLKNPNVRIESSRDSGVVIMNGVALVDMFMDSNKWVESFPTIVSVAKTIEVISSG 324

Query: 381 VAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRC 440
           + GN++G+LQ+M  E QV SPLVPTRE   +RYC+Q  +G WA+V VS D  + +   +C
Sbjct: 325 MLGNHSGSLQLMYEELQVLSPLVPTREFCILRYCQQIEQGLWAIVSVSYDIPQFASQFQC 384

Query: 441 RRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLYKQLVSTGNAFGAKRWVATLDRQC 499
            R PSGCLIQ+MPNGYSKV WVEHVE++D+   H LY+ L+ +G AFGA+RW+ATL R C
Sbjct: 385 HRLPSGCLIQDMPNGYSKVIWVEHVEIEDKAPTHQLYRDLIHSGLAFGAERWLATLQRMC 444

Query: 500 ERLASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGA 558
           ER+A  M +   T ++ GVI + +G++SM+KL +RMV SFC+ +S S +H W+TLSG   
Sbjct: 445 ERVACQMVSGSSTRDLGGVIPSPEGKRSMMKLGQRMVSSFCSSISTSNSHRWSTLSGLHD 504

Query: 559 DDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQ 618
             VR+   K+  DPG+P G+VLSAAT+F LPV P+ VF+F +DE TR +WD+LS+G  VQ
Sbjct: 505 VGVRITLHKNT-DPGQPNGVVLSAATTFSLPVSPQNVFNFFKDEKTRPQWDVLSSGNAVQ 563

Query: 619 EMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNV 678
           E+AHIANG   GNC+S+LR     + N+SQ+NMLILQESC D + S V+Y PVD+ A+N+
Sbjct: 564 EVAHIANGSHPGNCISVLR-----AYNTSQNNMLILQESCMDSSGSLVVYCPVDLPAINI 618

Query: 679 VLNGGDPDYVALLPSGFAILPDGTSLHGANIGE--------AASGGSLLTVAFQILVDSV 730
            ++G DP Y+ LLPSGF I PDG    G             A S GSL+TVAFQILV S+
Sbjct: 619 AMSGEDPSYIPLLPSGFTISPDGYPDQGDGASTSSNTQGRMARSSGSLITVAFQILVSSL 678

Query: 731 PTAKLSLGSVATVNNLIACTVERIKASLSC 760
           P+A+L+L SV TVN+LI  T+++IKA+LSC
Sbjct: 679 PSARLNLESVNTVNSLIGTTIQQIKAALSC 708


>gi|225427116|ref|XP_002277673.1| PREDICTED: homeobox-leucine zipper protein ROC3 [Vitis vinifera]
 gi|147777871|emb|CAN60291.1| hypothetical protein VITISV_032685 [Vitis vinifera]
 gi|297742043|emb|CBI33830.3| unnamed protein product [Vitis vinifera]
          Length = 798

 Score =  686 bits (1771), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/750 (47%), Positives = 503/750 (67%), Gaps = 41/750 (5%)

Query: 40  MEGQLHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRH 97
           M G  H         ES + R ++E    + SGSE+ EG SG++QE  Q+P KKKRYHRH
Sbjct: 37  MGGPFHAFSSIIPKEESGLLRGKDEM--ESGSGSEHIEGVSGNEQENEQQP-KKKRYHRH 93

Query: 98  TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           T  QIQEMEA FKECPHPDDKQR +LS+ELGL+P QVKFWFQN+RTQMK Q +R +N  L
Sbjct: 94  TARQIQEMEALFKECPHPDDKQRMKLSQELGLKPRQVKFWFQNRRTQMKAQQDRSDNVIL 153

Query: 158 RTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIA 217
           R ENE L+ +N R + AL +  CPNCGGP  +GE++FDE  LR+ENARL+EE+DR+  +A
Sbjct: 154 RAENENLKNENYRLQAALRSVICPNCGGPAMLGEIAFDEQQLRIENARLKEELDRVCCLA 213

Query: 218 AKYVGKPVV---NYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAP--- 271
           ++Y G+ +      P L  P     + +   NF  +P     +M     +  S   P   
Sbjct: 214 SRYGGRAIQAIGPPPPLLAPSLDLDMSIYARNF-PEPMANCTDMIPVPLMPESSHFPEGG 272

Query: 272 --TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK- 328
              E +K + +ELA+++++EL++M Q+GEPLW+ S +    V+N +EY R FP  +  K 
Sbjct: 273 LVLEEEKSLALELAISSVDELVKMCQLGEPLWIRSNENGKEVINVEEYGRMFPWPMNLKQ 332

Query: 329 -PTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNG 387
            P  F+ EA+R++AVVIMN I+LV+  +D  +W  +F  I+SRA T++VLS GV+G+ NG
Sbjct: 333 HPGEFRTEATRDSAVVIMNSINLVDAFLDAMKWMELFPSIISRAKTVQVLS-GVSGHANG 391

Query: 388 ALQVMTAEFQVPSPLVPTRESYYVRYCKQH-GEGTWAVVDVSL----DNLRPSPAVRCRR 442
           +L +M AE QV SPLVPTRE++++RYC+Q+  EGTWA+VD  +    DNL+PS   R RR
Sbjct: 392 SLHLMYAELQVLSPLVPTRETHFLRYCQQNVDEGTWAIVDFPIDSFNDNLQPS-VPRYRR 450

Query: 443 RPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERL 502
           RPSGC+IQ+MPNGYS+VTWVEH +V+++ VH+++   V++G AFGA RW+A L RQCER+
Sbjct: 451 RPSGCIIQDMPNGYSRVTWVEHADVEEKPVHHIFHHFVNSGMAFGATRWLAVLQRQCERV 510

Query: 503 ASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVR 562
           AS+MA NI   ++GVI + + RK+++ LA+RM+ +F   +S S+  +WT LS +  D VR
Sbjct: 511 ASLMARNI--SDLGVIPSPEARKNLMNLAQRMIRTFSVNISTSSGQSWTALSDSSDDTVR 568

Query: 563 VMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAH 622
           + TRK + +PG+P G++LSA ++ WLP P   VFD LRDE  R++ D+LSNG  + E+AH
Sbjct: 569 ITTRK-ITEPGQPNGVILSAVSTTWLPHPHYHVFDLLRDERRRAQLDVLSNGNSLHEVAH 627

Query: 623 IANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNG 682
           IANG   GNC+SLLR+N   ++NSSQ+  L+LQESCTD + S V+Y  +D+ A+ + ++G
Sbjct: 628 IANGSHPGNCISLLRINV--ASNSSQNVELMLQESCTDQSGSHVVYTTIDVDAIQLAMSG 685

Query: 683 GDPDYVALLPSGFAILP-------------DGTSLHGANIGEAASGGSLLTVAFQILVDS 729
            DP  + LLP GFAI+P             D   +  +  G   + G LLTV  Q+L  +
Sbjct: 686 EDPSCIPLLPMGFAIVPVVPNNDCNIMTTTDDNPMPPSGDGNGHNSGCLLTVGLQVLAST 745

Query: 730 VPTAKLSLGSVATVNNLIACTVERIKASLS 759
           +PTAKL+L SV  +NN +  TV +I A+LS
Sbjct: 746 IPTAKLNLSSVTAINNHLCNTVHQINAALS 775


>gi|357480751|ref|XP_003610661.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355511996|gb|AES93619.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 735

 Score =  685 bits (1768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/757 (50%), Positives = 491/757 (64%), Gaps = 74/757 (9%)

Query: 49  MTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQE-QRPNKKKRYHRHTQHQIQEMEA 107
           M QN S     R REE      +   N E  S DDQE  +  +K+ Y RHTQ QI EM+ 
Sbjct: 1   MYQNRS----TRTREE------ANQMNMEAPSSDDQESNQRRRKRTYRRHTQQQIDEMDT 50

Query: 108 FFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK--------------------- 146
           FFK+CP+P+D QR+ELS   GL+P Q+KFWFQN+RT +K                     
Sbjct: 51  FFKQCPNPNDAQRRELSLRTGLDPTQIKFWFQNRRTSLKHDNVIFTVIYIALQWRPDAVA 110

Query: 147 -----TQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRL 201
                 Q +R EN  L+ ENEKLR +  RY+ A+S  +C  CG  +  GEMS +E  LRL
Sbjct: 111 NIAATVQTDRDENELLKIENEKLRDELDRYKGAIS-TTCKVCGSSSNAGEMSHEEQQLRL 169

Query: 202 ENARLREEIDRISAIAAKYVG------KPVVNYPLLSPPVPSRPLELAV--GNFGA-QPG 252
           ENA LR+E++R       +VG      +  +     S  V S   +  V  GN GA    
Sbjct: 170 ENALLRKELER-------FVGETPTDSRANITSSNNSTHVASHSTDFGVAGGNNGASHRM 222

Query: 253 IGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQ-MGEPLWMTSLDGTAAV 311
           +G G   G +    S+      +K  I+ELAV  M+EL ++A+  G PLW+ + +    +
Sbjct: 223 VGEGLSVGGS----SVQIKGLNEKQKIVELAVVGMDELTKLARTYGPPLWIPT-NYVTEI 277

Query: 312 LNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRA 371
           LN +EY++ FPRG GP   G + E S+E+ VV++N   LV+ILMDVNQWS +F GIVSRA
Sbjct: 278 LNGEEYMKYFPRGNGPNTCGLRLEGSKESVVVMINAPDLVDILMDVNQWSNMFCGIVSRA 337

Query: 372 MTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN 431
            TLEVLSTGV GNY+GALQVMTAEFQVPSP VPTR++++VRYCK H +G W V DVSL  
Sbjct: 338 ATLEVLSTGVGGNYDGALQVMTAEFQVPSPHVPTRQNHFVRYCKLHPDGIWVVADVSLHL 397

Query: 432 LR--------PSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTG 483
           L          S A R  RRPSGCLI+ +PNG +KVTW+E+VEVDD+ V N+YK LV++G
Sbjct: 398 LNAASASSSSSSTASRTNRRPSGCLIETLPNGLTKVTWIENVEVDDQVVQNIYKPLVNSG 457

Query: 484 NAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVS 543
            AFGAKRWVATL RQ +RL    ATN+P  E  V    +G+KS+L LAER+V SF   + 
Sbjct: 458 LAFGAKRWVATLHRQSDRLFFRTATNVPR-EHHVRLTPEGKKSILNLAERLVASFSTSIG 516

Query: 544 ASTAHTWTTLSGTGADDVRVMTRKSVDDPG--RPPGIVLSAATSFWLPVPPKRVFDFLRD 601
           +ST H WT + G G + V VMT++ +D+    +P  +VLSAATSFWLPVPP+RVFDFLRD
Sbjct: 517 SSTTHAWTKVPGNGPEVVMVMTKRYIDESSIDKPVSVVLSAATSFWLPVPPRRVFDFLRD 576

Query: 602 ENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDP 661
           +NTR  WDILS GG+V E+AHI+NGRD+GN VSL R+    S NS QS++++LQE+CTD 
Sbjct: 577 QNTRKHWDILSAGGIVHELAHISNGRDSGNYVSLFRIT---SENSEQSDVVVLQENCTDV 633

Query: 662 TASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTV 721
           T S+V+YAPV I  M+ +LNGGD   + LLPSGFAI PDG   +G  I    SGGSL+TV
Sbjct: 634 TGSYVVYAPVQIPTMHEILNGGDSSRLTLLPSGFAIFPDGCITNGGPIMNVGSGGSLVTV 693

Query: 722 AFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           AFQI+VDS+P A+L+LGS+ TVN LI  TVERI+ ++
Sbjct: 694 AFQIIVDSIPHARLALGSITTVNTLIKNTVERIRTAV 730


>gi|33355392|gb|AAQ16126.1| homeodomain protein BNLGHi6313 [Gossypium hirsutum]
          Length = 788

 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/721 (49%), Positives = 493/721 (68%), Gaps = 37/721 (5%)

Query: 67  DSTKSGSENHEGASGDDQE-----QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK 121
           D     S++ EGA G+DQ+     + P KKK++HRH  HQI E+E+FFKECPHPD+KQR+
Sbjct: 69  DDGYGSSDDFEGALGNDQDTADNGRPPKKKKKFHRHNPHQIHELESFFKECPHPDEKQRR 128

Query: 122 ELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCP 181
           ELSR L LE  Q+KFWFQN+RTQMKTQ ERHEN  L+ EN+KLRA+N   R+A+++A C 
Sbjct: 129 ELSRRLALESKQIKFWFQNRRTQMKTQLERHENVFLKQENDKLRAENDLLRQAIASAICN 188

Query: 182 NCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPL- 240
           NCG P    E+S++   L +EN+RL++E++R  A+  K++G+ + +      P PS+ L 
Sbjct: 189 NCGVPAVPDEISYEPSQLMIENSRLKDELNRARALTNKFLGRHLSSSSANPSPSPSQGLN 248

Query: 241 ---ELAVGNFGAQPGIGGGEM---------YGAADLLRSISAPTEA--DKPMIIELAVAA 286
              E+ V   G   G+  G +         +GA   L + S   E   DK  ++++A+AA
Sbjct: 249 SNVEVVVRRTGF-CGLNNGSISLPMGFEFGHGATMPLMNPSFAYEMPYDKSALVDVALAA 307

Query: 287 MEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMN 346
           M+ELI+MAQMG PLW+         LN +EY RTF   IG KP+GF  EA+RETA+V + 
Sbjct: 308 MDELIKMAQMGNPLWIKGFGDGMETLNLEEYKRTFSSFIGMKPSGFTTEATRETAMVPLR 367

Query: 347 HISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTR 406
            ++LV+ LMD N+W+ +F  ++SRA+T++VLS+G     + ALQ+M AEFQV SPLVP R
Sbjct: 368 GLALVDTLMDANRWAEMFPCMISRAVTIDVLSSGKGVTRDNALQLMEAEFQVLSPLVPIR 427

Query: 407 ESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAV---RCRRRPSGCLIQEMPNGYSKVTWVE 463
           +  ++R+CKQH +  WA+VDVS++    + A+    CRR PSGC+IQ+M N YSKVTWVE
Sbjct: 428 QVQFIRFCKQHSDSVWAIVDVSINLSNAANALMFANCRRLPSGCVIQDMDNKYSKVTWVE 487

Query: 464 HVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDG 523
           H E D+  VH+L++ L+S+G  FGA+RW+ATL RQ   LA +M+ +I   ++  +    G
Sbjct: 488 HSEYDESTVHHLFRPLLSSGFGFGAQRWIATLRRQYSSLAQLMSPDIHGEDINTV----G 543

Query: 524 RKSMLKLAERMVISFCAGVSASTAHTWTTLS-GTGADDVRVMTRKSVDDPGRPPGIVLSA 582
           +KSMLKLA+RM  +F AG+ AS+ + W  L+ G   +DVRVMTRK+V+DPG P GIVLSA
Sbjct: 544 KKSMLKLAQRMAYNFSAGIGASSVNKWDKLNVGNVGEDVRVMTRKNVNDPGEPLGIVLSA 603

Query: 583 ATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQ 642
           ATS W+P+  + +F FLR+E  R++WDILS+G  +Q M  +A G   GNCVS+LR     
Sbjct: 604 ATSVWMPITQQTLFGFLRNERMRNQWDILSSGRPMQAMFSVAKGPGQGNCVSILRG---A 660

Query: 643 SANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP--- 699
           + N S +NMLIL+E+ +D   + ++YAPVD  ++ VV+NGGD  +VALLPSGFAILP   
Sbjct: 661 AVNGSDTNMLILRETWSDACGALIVYAPVDASSIRVVMNGGDSSHVALLPSGFAILPGVQ 720

Query: 700 -DGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
            DG S+   +I E  S G +LTV FQILV+SVPTAKL++ SV TVN+L+ CTVE+IKA+L
Sbjct: 721 TDGPSMQ-PDIDENTSDGCILTVGFQILVNSVPTAKLTVESVETVNHLLTCTVEKIKAAL 779

Query: 759 S 759
           S
Sbjct: 780 S 780


>gi|297741089|emb|CBI31820.3| unnamed protein product [Vitis vinifera]
          Length = 885

 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/713 (48%), Positives = 481/713 (67%), Gaps = 76/713 (10%)

Query: 58  IARLREEEFDSTKSGSENHEGASGDDQE----QRPNKKKRYHRHTQHQIQEMEAFFKECP 113
           + R+ E+ ++S  SGS N +G   D+QE    +RP KK +YHRHTQ QI E+E  FKE P
Sbjct: 1   MGRINEDGYESM-SGSGNLDGGLEDEQETLVLERPAKKLKYHRHTQEQINELETCFKEWP 59

Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYRE 173
           HPD+KQR +LSR+L LEP QVKFWFQN+RTQMK Q ERHEN  LR EN+KLR +N+  ++
Sbjct: 60  HPDEKQRLDLSRKLNLEPRQVKFWFQNRRTQMKNQLERHENVMLRQENDKLRVENVAIKD 119

Query: 174 ALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSP 233
           A+ N  C +CGG   +G ++ +E+ LR+ENA+LR+E+ RI  +A K++G+PV   PL SP
Sbjct: 120 AVRNPICNHCGGVAMLGNITIEENQLRVENAQLRDELSRICGLAEKFLGRPVT--PLASP 177

Query: 234 ---PVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEEL 290
              P PS  LEL V         G G ++                    +ELAV AM+EL
Sbjct: 178 IALPRPSSNLELEVA--------GNGSVF--------------------VELAVTAMDEL 209

Query: 291 IRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISL 350
           +R+AQ   P+WMTSLDG    LN                      ASRET +V++N ++L
Sbjct: 210 LRLAQADSPIWMTSLDGGKETLN---------------------PASRETGMVMINSLAL 248

Query: 351 VEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYY 410
           VE LMD ++W+ +F  ++++A T +VLS+G+    +GALQ+M AE QV SPLVP R+  +
Sbjct: 249 VETLMDGSRWAQMFPCVIAKASTTDVLSSGIGRTRHGALQLMHAELQVLSPLVPVRQVKF 308

Query: 411 VRYCKQHGEGTWAVVDVS----LDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVE 466
           +R+CKQHGEG WAVVDVS    LD    +  V CRR  SGC++Q++ NGY++VTW+EH E
Sbjct: 309 LRFCKQHGEGLWAVVDVSIDTALDGASINSFVNCRRLLSGCVVQDLSNGYTRVTWIEHSE 368

Query: 467 VDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS 526
            D+  VH LY+ L+S+G  FGA RW+ATL RQCE +A ++++ +P  +  V+T Q GR+S
Sbjct: 369 YDESAVHYLYRSLLSSGLGFGALRWLATLQRQCESIAILLSSTVPCEDHPVLT-QAGRRS 427

Query: 527 MLKLAERMVISFCAGVSASTAHTWTTLS-GTGADDVRVMTRKSVDDPGRPPGIVLSAATS 585
           +L+L  RM  +FCAGV AST   W  L   +  +DV+VMTRKS++ PG PPG++LSAATS
Sbjct: 428 LLQLTNRMRDNFCAGVCASTVRMWNKLHVASLGEDVKVMTRKSMNIPGEPPGVILSAATS 487

Query: 586 FWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSAN 645
            W+P+  +++F+FLRDE  RS+WDILSNGG +QEM HI  G+ + NCVSLLR N   + N
Sbjct: 488 VWMPIMHQQLFNFLRDERQRSKWDILSNGGPMQEMIHIPKGQTSSNCVSLLRPN---ARN 544

Query: 646 SSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH 705
            + + MLILQE+  D + S ++YAP+D+ +M  V+ GGD  +VALLPSGFAI+PDG+S  
Sbjct: 545 QNDNTMLILQETWADASGSLIVYAPLDVASMRAVMTGGDSSFVALLPSGFAIVPDGSSNK 604

Query: 706 GANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           G+        GSLLTVAFQILV+S+P AKL++ SV TVN+L++CT+ +IK+++
Sbjct: 605 GS--------GSLLTVAFQILVNSLPMAKLNVESVETVNSLLSCTINKIKSAI 649


>gi|242095072|ref|XP_002438026.1| hypothetical protein SORBIDRAFT_10g006820 [Sorghum bicolor]
 gi|241916249|gb|EER89393.1| hypothetical protein SORBIDRAFT_10g006820 [Sorghum bicolor]
          Length = 700

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/711 (50%), Positives = 476/711 (66%), Gaps = 46/711 (6%)

Query: 77  EGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKF 136
           E    D Q QR    KRYHRHT  QIQ++EA FKECPHPD+ QR  LSRELGLEP Q+KF
Sbjct: 6   EPEGSDSQRQR----KRYHRHTPRQIQQLEAMFKECPHPDENQRAALSRELGLEPRQIKF 61

Query: 137 WFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDE 196
           WFQN+RTQMK QHER +N  LR EN+K+R +N+  REAL N  CPNCGGP  + E  FDE
Sbjct: 62  WFQNRRTQMKAQHERADNCFLRAENDKIRCENITMREALKNVICPNCGGP-PVAEDFFDE 120

Query: 197 HHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPS---RPLELAVGNFGAQPGI 253
             LR+ENARL+EE+DR+S+I +KY+G+P        PPVP+     L+L++G    Q G 
Sbjct: 121 QKLRMENARLKEELDRVSSITSKYLGRPFTQM----PPVPTMSMSSLDLSMGGMPGQQGH 176

Query: 254 GGGEMYGAADLLRSIS--------AP-TEADKPMIIELAVAAMEELIRMAQMGEPLWMTS 304
            GG      DLL   S        AP TE ++PM++++A  AM+ELIR+AQ G+ +W+  
Sbjct: 177 LGGPPSLDLDLLSGCSSGMPYQMPAPVTEMERPMMVDMATRAMDELIRLAQAGDQIWVKG 236

Query: 305 LDGTA-AVLNEDEYVRTFPR-GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWST 362
           + G A  +LN   Y   F + G+  +P     E SR++ +V M+ ++LV++ MD N+W  
Sbjct: 237 MPGDAREMLNVATYDSLFSKPGVAFRPPDMNVEGSRDSGLVFMSAVALVDVFMDTNKWME 296

Query: 363 VFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTW 422
            F GIVS+A T++VL  G+ G    +L +M  E  + +P+VPTRE  ++RYCKQ  +G W
Sbjct: 297 FFPGIVSKAQTVDVLVNGLGGRSE-SLIMMYEELHIMTPVVPTRELSFLRYCKQIEQGLW 355

Query: 423 AVVDVSLDNLR------PSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNL 475
           A+ DVSLD  R      PS   R RR PSGCLI +M NGYSKVTWVEH+E++    ++ L
Sbjct: 356 AIADVSLDGQRDAHYGMPS---RSRRMPSGCLIADMSNGYSKVTWVEHMEIEQMLPINVL 412

Query: 476 YKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMV 535
           Y+ LV +G AFGA RW+A L R CER ASV    +P  ++  +T  +G++SM+KL++RMV
Sbjct: 413 YRNLVLSGAAFGAHRWLAALQRACERFASVATLGVPHHDIAGVT-PEGKRSMMKLSQRMV 471

Query: 536 ISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRV 595
            SFCA +S+S    WT LSGT    VRV T +S D  G+P G+VLSAATS WLPVP   V
Sbjct: 472 GSFCASLSSSPLQRWTLLSGTTDVSVRVSTHRSTDSGGQPNGVVLSAATSIWLPVPGDHV 531

Query: 596 FDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQ 655
           F F+RDEN RS+WD+LS+G  VQE++ I NG + GNC+SLLR       N++Q++MLILQ
Sbjct: 532 FAFVRDENARSQWDVLSHGNQVQEVSRIPNGSNPGNCISLLR-----GLNANQNSMLILQ 586

Query: 656 ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGE---- 711
           ESCTD + + V+Y+P+DI A NVV++G DP  + LLPSGFAILPDG    GA        
Sbjct: 587 ESCTDASGALVVYSPIDIPAANVVMSGEDPSGIPLLPSGFAILPDGRPGSGAGASSSVVL 646

Query: 712 --AASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
             A+  G ++TVAFQILV ++P+++L+  SVATVN+LI  TV++IKA+L+C
Sbjct: 647 PLASQPGCVVTVAFQILVSNLPSSRLNAESVATVNSLIGTTVQQIKAALNC 697


>gi|345195194|tpg|DAA34962.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413924373|gb|AFW64305.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 698

 Score =  679 bits (1753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/707 (50%), Positives = 477/707 (67%), Gaps = 45/707 (6%)

Query: 81  GDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
           G D ++R   KKRYHRHT  QIQ++EA FKECPHPD+ QR +LSRELGLEP Q+KFWFQN
Sbjct: 11  GSDAQRR---KKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSRELGLEPRQIKFWFQN 67

Query: 141 KRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLR 200
           +RTQMK QHER +N  LR EN+K+R +N+  REAL +  CP CGGP  + +  FDE  LR
Sbjct: 68  RRTQMKAQHERQDNCFLRAENDKIRCENIAMREALRSVICPTCGGP-PVADDYFDEQKLR 126

Query: 201 LENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGI------G 254
           +ENARL+EE+DR+S++ +KY+G+P+   P     +    L+L+VG  G+ P +      G
Sbjct: 127 MENARLKEELDRVSSLTSKYLGRPITQLPPAQAALSMSSLDLSVGGLGS-PSLDLDLLSG 185

Query: 255 GGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNE 314
           G   Y    L   +S   E ++PM+ E+A  AM+ELIRMAQ GE LW+ +  G   VLN 
Sbjct: 186 GSSGYPPFHLPMPVS---EMERPMMAEMATRAMDELIRMAQAGEHLWVKA--GGREVLNV 240

Query: 315 DEYVRTFPRGIGPKPTGFK-----CEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVS 369
           D Y   F +   P    F+      E SR++ +V M+ + LV++ MD ++W+  F  IVS
Sbjct: 241 DTYDSVFAK---PGAASFRGPDVHVEGSRDSGLVFMSAVGLVDMFMDSSKWTEFFPAIVS 297

Query: 370 RAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL 429
           +A T++VL  G+AG    +L +M  E  V SP+VPTRE  ++RYC+Q   G WA+ D+S+
Sbjct: 298 KARTVDVLVNGMAGRSE-SLVLMYEELHVMSPVVPTREFCFLRYCRQIERGLWAIADISV 356

Query: 430 DNLRP-----SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQLVSTG 483
           D  +      +P  R  R PSGCLI +M +G SKVTWVEH+E++DR  +H LY+ L+ +G
Sbjct: 357 DLQQHDARFGAPPSRSCRLPSGCLIADMADGSSKVTWVEHMEIEDRVPIHLLYRDLILSG 416

Query: 484 NAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI-TNQDGRKSMLKLAERMVISFCAGV 542
            AFGA RW+A L R CER A ++   +P  ++ V     +G++SM+KL++RMV SFCA +
Sbjct: 417 AAFGAHRWLAALQRACERCACLVPAGMPHRDIAVAGVTPEGKRSMMKLSQRMVSSFCASL 476

Query: 543 SASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDE 602
           SAS  H WTTLSG     VRV   +S  DPG+P G+VLSAATS WLPVP  RVF F+RDE
Sbjct: 477 SASQLHRWTTLSGPSDVGVRVTVHRST-DPGQPSGVVLSAATSIWLPVPCDRVFAFVRDE 535

Query: 603 NTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPT 662
           +TRS+WD+LS+G  VQE++ I NG   GNC+SLLR       N+SQ++MLILQESCTD T
Sbjct: 536 HTRSQWDVLSHGNPVQEVSRIPNGSHPGNCISLLR-----GLNASQNSMLILQESCTDGT 590

Query: 663 ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG-------TSLHGANIGEAASG 715
            S V+YAP+DI A NVV++G DP  + LLPSGF ILPDG       +S  G  +G  A+ 
Sbjct: 591 GSLVVYAPIDIPAANVVMSGEDPSAIPLLPSGFTILPDGRPGAPSSSSAGGPLVGSPAAA 650

Query: 716 GSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           GSL+TVAFQILV S+P+++L+  SVATVN+LI+ TVE+IKA+L+C S
Sbjct: 651 GSLVTVAFQILVSSLPSSRLNAESVATVNSLISTTVEQIKAALNCAS 697


>gi|345195196|tpg|DAA34963.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 692

 Score =  678 bits (1750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/698 (51%), Positives = 474/698 (67%), Gaps = 33/698 (4%)

Query: 81  GDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
           G D ++R   KKRYHRHT  QIQ++EA FKECPHPD+ QR +LSRELGLEP Q+KFWFQN
Sbjct: 11  GSDAQRR---KKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSRELGLEPRQIKFWFQN 67

Query: 141 KRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLR 200
           +RTQMK QHER +N  LR EN+K+R +N+  +EAL N  CP CGGP  + +  FDE  LR
Sbjct: 68  RRTQMKAQHERQDNCFLRAENDKIRCENIAMQEALRNVICPTCGGPP-VADDHFDEQKLR 126

Query: 201 LENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGI------G 254
           +ENARL+EE+DR+S++ +KY+G+P+   P  +  +    L+L+VG  G  P +      G
Sbjct: 127 MENARLKEELDRVSSLTSKYLGRPITQLP-SAQALSMSSLDLSVGGLGG-PSLDLDLLSG 184

Query: 255 GGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNE 314
           G   Y    LL    A +E ++PM+ E+A  AM+ELIRMAQ GE LW+ +  G   VLN 
Sbjct: 185 GSSGYPPFHLLP--MAVSEMERPMMAEMATRAMDELIRMAQAGEHLWVKT--GGREVLNV 240

Query: 315 DEYVRTFPRGIGP-KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMT 373
           D Y   F +  G  +      E SRET +V M+ I LV++ MD ++W+ +F  IVS+A T
Sbjct: 241 DTYDSIFAKPDGSFRGPDVHVEGSRETGLVFMSAIGLVDMFMDSSKWTELFPAIVSKART 300

Query: 374 LEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR 433
           ++VL  G+ G    +L +M  E  V SP+VPTRE  ++RYC+Q   G WA+ D+S+D  +
Sbjct: 301 VDVLVNGMGGRSE-SLLLMYEELHVMSPVVPTREFCFLRYCRQIEHGLWAIADISVDQQQ 359

Query: 434 P-----SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQLVSTGNAFG 487
                 +P  R  R PSGCLI +M +G SKVTWVEH+E++DR  +H LY+ LV +G AFG
Sbjct: 360 RDARFGAPPSRSCRLPSGCLIADMADGSSKVTWVEHMEIEDRVPIHLLYRDLVLSGAAFG 419

Query: 488 AKRWVATLDRQCERLASVMATNI-PTGEVGVI-TNQDGRKSMLKLAERMVISFCAGVSAS 545
           A RW+A L R CER A +    I P  ++       +G++SM+KL++RMV SFCA +SAS
Sbjct: 420 AHRWLAALQRACERCACLATAGIMPHRDIAAAGVTPEGKRSMMKLSQRMVNSFCASLSAS 479

Query: 546 TAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
             H WTTLSG     VRVM  +S  DPG+P G+VLSAATS WLPVP  R F F+RDE+TR
Sbjct: 480 QLHRWTTLSGPNDVGVRVMVHRST-DPGQPSGVVLSAATSIWLPVPCDRAFAFVRDEHTR 538

Query: 606 SEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASF 665
           S+WD+LS+G  VQE++ I NG   GNC+SLLR       N+SQ++MLILQESCTD + S 
Sbjct: 539 SQWDVLSHGNPVQEVSRIPNGSHPGNCISLLR-----GLNASQNSMLILQESCTDASGSL 593

Query: 666 VIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGT-SLHGANIGEAASGGSLLTVAFQ 724
           V+YAP+DI A NVV++G DP  + LLPSGF+ILPDG      +  G+A S GSL+TVAFQ
Sbjct: 594 VVYAPIDIPAANVVMSGEDPSAIPLLPSGFSILPDGRPGASSSRAGQAPSAGSLVTVAFQ 653

Query: 725 ILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           ILV S+P+AKL+  SVATVN+LI+ TVE+IKA+L+C S
Sbjct: 654 ILVSSLPSAKLNAESVATVNSLISTTVEQIKAALNCAS 691


>gi|413939124|gb|AFW73675.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 701

 Score =  677 bits (1746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/707 (51%), Positives = 479/707 (67%), Gaps = 42/707 (5%)

Query: 81  GDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
           G D ++R   KKRYHRHT  QIQ++EA FKECPHPD+ QR +LSRELGLEP Q+KFWFQN
Sbjct: 11  GSDAQRR---KKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSRELGLEPRQIKFWFQN 67

Query: 141 KRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLR 200
           +RTQMK QHER +N  LR EN+K+R +N+  +EAL N  CP CGGP  + +  FDE  LR
Sbjct: 68  RRTQMKAQHERQDNCFLRAENDKIRCENIAMQEALRNVICPTCGGPP-VADDHFDEQKLR 126

Query: 201 LENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGI------G 254
           +ENARL+EE+DR+S++ +KY+G+P+   P  +  +    L+L+VG  G  P +      G
Sbjct: 127 MENARLKEELDRVSSLTSKYLGRPITQLP-SAQALSMSSLDLSVGGLGG-PSLDLDLLSG 184

Query: 255 GGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNE 314
           G   Y    LL    A +E ++PM+ E+A  AM+ELIRMAQ GE LW+ +  G   VLN 
Sbjct: 185 GSSGYPPFHLLP--MAVSEMERPMMAEMATRAMDELIRMAQAGEHLWVKT--GGREVLNV 240

Query: 315 DEYVRTFPRGIGP-KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMT 373
           D Y   F +  G  +      E SRET +V M+ I LV++ MD ++W+ +F  IVS+A T
Sbjct: 241 DTYDSIFAKPDGSFRGPDVHVEGSRETGLVFMSAIGLVDMFMDSSKWTELFPAIVSKART 300

Query: 374 LEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR 433
           ++VL  G+ G    +L +M  E  V SP+VPTRE  ++RYC+Q   G WA+ D+S+D  +
Sbjct: 301 VDVLVNGMGGRSE-SLLLMYEELHVMSPVVPTREFCFLRYCRQIEHGLWAIADISVDQQQ 359

Query: 434 P-----SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQLVSTGNAFG 487
                 +P  R  R PSGCLI +M +G SKVTWVEH+E++DR  +H LY+ LV +G AFG
Sbjct: 360 RDARFGAPPSRSCRLPSGCLIADMADGSSKVTWVEHMEIEDRVPIHLLYRDLVLSGAAFG 419

Query: 488 AKRWVATLDRQCERLASVMATNI-PTGEV---GVITNQ-------DGRKSMLKLAERMVI 536
           A RW+A L R CER A +    I P  ++   G I+++       +G++SM+KL++RMV 
Sbjct: 420 AHRWLAALQRACERCACLATAGIMPHRDIAAAGDISHRELLAVTPEGKRSMMKLSQRMVN 479

Query: 537 SFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVF 596
           SFCA +SAS  H WTTLSG     VRVM  +S  DPG+P G+VLSAATS WLPVP  R F
Sbjct: 480 SFCASLSASQLHRWTTLSGPNDVGVRVMVHRST-DPGQPSGVVLSAATSIWLPVPCDRAF 538

Query: 597 DFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQE 656
            F+RDE+TRS+WD+LS+G  VQE++ I NG   GNC+SLLR       N+SQ++MLILQE
Sbjct: 539 AFVRDEHTRSQWDVLSHGNPVQEVSRIPNGSHPGNCISLLR-----GLNASQNSMLILQE 593

Query: 657 SCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGT-SLHGANIGEAASG 715
           SCTD + S V+YAP+DI A NVV++G DP  + LLPSGF+ILPDG      +  G+A S 
Sbjct: 594 SCTDASGSLVVYAPIDIPAANVVMSGEDPSAIPLLPSGFSILPDGRPGASSSRAGQAPSA 653

Query: 716 GSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           GSL+TVAFQILV S+P+AKL+  SVATVN+LI+ TVE+IKA+L+C S
Sbjct: 654 GSLVTVAFQILVSSLPSAKLNAESVATVNSLISTTVEQIKAALNCAS 700


>gi|226498004|ref|NP_001142912.1| uncharacterized protein LOC100275344 [Zea mays]
 gi|195611342|gb|ACG27501.1| hypothetical protein [Zea mays]
          Length = 698

 Score =  676 bits (1745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/707 (50%), Positives = 476/707 (67%), Gaps = 45/707 (6%)

Query: 81  GDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
           G D ++R   KKRYHRHT  QIQ++EA FKECPHPD+ QR +LSRELGLEP Q+KFWFQN
Sbjct: 11  GSDAQRR---KKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSRELGLEPRQIKFWFQN 67

Query: 141 KRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLR 200
           +RTQMK QHER +N  LR EN+K+R +N+  REAL +  CP CGGP  + +  FDE  LR
Sbjct: 68  RRTQMKAQHERQDNCFLRAENDKIRCENIAMREALRSVICPTCGGPP-VADDYFDEQKLR 126

Query: 201 LENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGI------G 254
           +ENARL+EE+DR+S++ +KY+G+P+   P     +    L+L+VG  G+ P +      G
Sbjct: 127 MENARLKEELDRVSSLTSKYLGRPITQLPPAQAALSMSSLDLSVGGLGS-PSLDLDLLSG 185

Query: 255 GGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNE 314
           G   Y    L  S+S   E ++PM+ E+A  AM+ELIRMAQ GE LW+ +  G   VLN 
Sbjct: 186 GSSGYPPFHLPMSVS---EMERPMMAEMATRAMDELIRMAQAGEHLWVKA--GGREVLNV 240

Query: 315 DEYVRTFPRGIGPKPTGFK-----CEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVS 369
           D Y   F +   P    F+      E SR++ +V M+ + LV++ MD ++W+  F  IVS
Sbjct: 241 DTYDSVFAK---PGAASFRGPDVHVEGSRDSGLVFMSAVGLVDMFMDSSKWTEFFPAIVS 297

Query: 370 RAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL 429
           +A T++VL  G+AG    +L +M  E  V SP+VPTRE  ++RYC+Q   G WA+ D+S+
Sbjct: 298 KARTVDVLVNGMAGRSE-SLVLMYEELHVMSPVVPTREFCFLRYCRQIERGLWAIADISV 356

Query: 430 DNLRP-----SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQLVSTG 483
           D  +      +P  R  R PSGCLI +M +G SKVTWVEH+E++DR  +H LY+ L+ +G
Sbjct: 357 DLQQHDARFGAPPSRSCRLPSGCLIADMADGSSKVTWVEHMEIEDRVPIHLLYRDLILSG 416

Query: 484 NAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI-TNQDGRKSMLKLAERMVISFCAGV 542
            A GA RW+A L R CER A ++   +P  ++ V     +G++SM+KL++RMV SFCA +
Sbjct: 417 AALGAHRWLAALQRACERCACLVPAGMPHRDIAVAGVTPEGKRSMMKLSQRMVSSFCASL 476

Query: 543 SASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDE 602
           SAS  H WTTLSG     VRV   +S  DPG+P G+VLSAATS WLPVP  RVF F+RDE
Sbjct: 477 SASQLHRWTTLSGPSDVGVRVTVHRST-DPGQPSGVVLSAATSIWLPVPCDRVFAFVRDE 535

Query: 603 NTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPT 662
           + RS+WD+LS+G  VQE++ I NG   GNC+SLLR       N+SQ++MLILQESCTD T
Sbjct: 536 HRRSQWDVLSHGNPVQEVSRIPNGSHPGNCISLLR-----GLNASQNSMLILQESCTDGT 590

Query: 663 ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG-------TSLHGANIGEAASG 715
            S V+YAP+DI A NVV++G DP  + LLPSGF ILPDG       +S  G  +G  A+ 
Sbjct: 591 GSLVVYAPIDIPAANVVMSGEDPSAIPLLPSGFTILPDGRPGAPSSSSAGGPLVGSPAAA 650

Query: 716 GSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           GSL+TVAFQILV S+P+++L+  SVATVN+LI+ TVE+IKA+L+C S
Sbjct: 651 GSLVTVAFQILVSSLPSSRLNAESVATVNSLISTTVEQIKAALNCAS 697


>gi|296088020|emb|CBI35303.3| unnamed protein product [Vitis vinifera]
          Length = 674

 Score =  675 bits (1741), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/630 (54%), Positives = 441/630 (70%), Gaps = 28/630 (4%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +KKRYHRHT HQIQ +E  FKECPHPD+KQR +LSREL L P Q+KFWFQN+RTQMK QH
Sbjct: 26  RKKRYHRHTAHQIQRLEGMFKECPHPDEKQRLQLSRELALAPRQIKFWFQNRRTQMKAQH 85

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMS-FDEHHLRLENARLRE 208
           ER +N  LR EN+K+R +N+  REAL N  CP+CGGP  IGE S FDE  LR+ENA+L+E
Sbjct: 86  ERADNCALRVENDKIRCENIAIREALKNVICPSCGGP-PIGEDSYFDEQKLRVENAQLKE 144

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           E+DR+S+IAAKY+G+P+   P +  PV    L+L++G+FG Q G+G G      DLL   
Sbjct: 145 ELDRVSSIAAKYIGRPISQLPPVQ-PVHISSLDLSMGSFGGQ-GMGSGPSLD-LDLLPGS 201

Query: 269 SAP-----------TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEY 317
           S+            ++ DK ++ ++A  A++EL+R+ Q  EPLWM S      VLN + Y
Sbjct: 202 SSAMPILPFQGTGISDMDKSLMADVAGNALDELLRLLQTNEPLWMKSTTDGRDVLNLESY 261

Query: 318 VRTFPRGIGP-KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEV 376
            R FPR     K    + EASR++ VVIMN ++LV+I MD N+W  +F  IVS A TLEV
Sbjct: 262 ERIFPRANSHLKNPNVRIEASRDSGVVIMNSLALVDIFMDSNKWMELFPTIVSMARTLEV 321

Query: 377 LSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP-- 434
           LS+G+ G  +G+LQ+M  E QV S LVPTRE Y++RYC+Q  +G+WA+VDVS D  R   
Sbjct: 322 LSSGMMGGQSGSLQLMYGELQVLSSLVPTREFYFLRYCQQIEQGSWAIVDVSYDFPRDNQ 381

Query: 435 -SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLYKQLVSTGNAFGAKRWV 492
            +P     R PSGCLIQ+MPNGYSKVTWVEHVE++D+   H LY+ L+  G AFGA+RW+
Sbjct: 382 FAPQNPSHRLPSGCLIQDMPNGYSKVTWVEHVEIEDKTPTHRLYRDLIHRGLAFGAERWL 441

Query: 493 ATLDRQCERLASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWT 551
           ATL R CER A +M     T ++ GVI + DG++SM+KLA+RMV +FCA +S S  H WT
Sbjct: 442 ATLQRMCERFACLMVKGTSTRDLGGVIPSPDGKRSMMKLAQRMVNNFCASISTSNGHRWT 501

Query: 552 TLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDIL 611
           TLSG     VRV   K+  DPG+P G+VLSAAT+ WLPV P+ VF+F RDE TR +WD+L
Sbjct: 502 TLSGLNEVGVRVTIHKNT-DPGQPNGVVLSAATTIWLPVSPQNVFNFFRDERTRPQWDVL 560

Query: 612 SNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPV 671
           SNG  VQE+AHIANG   GNC+S+LR     + N+SQ+NMLILQESC D + S VIY PV
Sbjct: 561 SNGNAVQEVAHIANGPHPGNCISVLR-----AFNTSQNNMLILQESCIDSSGSLVIYCPV 615

Query: 672 DIVAMNVVLNGGDPDYVALLPSGFAILPDG 701
           D+ A+N+ ++G DP Y+ LLPSGF I PDG
Sbjct: 616 DLPAINIAMSGEDPSYIPLLPSGFTISPDG 645


>gi|326525158|dbj|BAK07849.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 685

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/700 (50%), Positives = 475/700 (67%), Gaps = 45/700 (6%)

Query: 79  ASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWF 138
           A G D  +R   KKRYHRHT  QIQ++EA FKECPHPD+ QR  LSRELGLEP Q+KFWF
Sbjct: 8   APGSDAHRR---KKRYHRHTPRQIQQLEAMFKECPHPDENQRMHLSRELGLEPRQIKFWF 64

Query: 139 QNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHH 198
           QN+RTQMK QHER +N  LR EN+K+R +N+  REAL N  CP CGGP +  +  FDEH 
Sbjct: 65  QNRRTQMKAQHERADNCFLRAENDKIRCENIAMREALKNVICPTCGGPHSGADDYFDEHK 124

Query: 199 LRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGG-- 256
           LR+ENA L+EE+DR+S++ +KY+G+P+   P +  P+    LEL+VG  G+   +G    
Sbjct: 125 LRMENAHLKEELDRVSSLTSKYLGRPITQLPSMQ-PLSMSSLELSVGGLGSPVALGPALD 183

Query: 257 -EMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNED 315
            +  G +   +  +  ++ ++PM+ E+A  AM+ELIR+AQ GE LW+ +  G   VLN D
Sbjct: 184 LDTLGGSSPFQLPAPVSDMERPMMAEMATRAMDELIRLAQAGEHLWVKTAGGR-EVLNVD 242

Query: 316 EYVRTFPRGIGPKPTGFK-----CEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSR 370
            Y   F +   P  + F+      E SR++ +V+   I LV+  MD ++W+  F  +V+R
Sbjct: 243 TYDSIFAK---PGSSSFRGPDVHVEGSRDSCLVLTTAIGLVDTFMDSSKWTEFFPTVVTR 299

Query: 371 AMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLD 430
           A T++VL  G+AG  + +L +M  E  V SP+VPTRE  ++RYC+Q  +G WA+ DVS+D
Sbjct: 300 ARTIDVLVNGMAGR-SESLVLMYEELHVMSPVVPTREFCFLRYCRQIEQGLWAIADVSVD 358

Query: 431 NLRP----SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLYKQLVSTGNA 485
             R     +P  R RR PSGCLI +M NGYSKVTWVEH+E +D+  ++ LY+ LV +G A
Sbjct: 359 LQRDARYGAPPARSRRLPSGCLIADMSNGYSKVTWVEHMETEDKTPINQLYRDLVLSGAA 418

Query: 486 FGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSAS 545
           FGA RW+A L R CER A ++    P  ++  +T  +G++SM++L++RMV SFCA +SAS
Sbjct: 419 FGAHRWLAALQRACERHACLVTP--PHRDIAGVT-LEGKRSMMRLSQRMVGSFCASLSAS 475

Query: 546 TAHTWTTLSGTGAD-----DVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLR 600
             H WTTLSG GA       VRVM  +S  DPG+P G+VLSAATS WLPVP  RVF F+R
Sbjct: 476 QQHRWTTLSGPGAGVDEAAGVRVMVHRST-DPGQPSGVVLSAATSIWLPVPCDRVFAFVR 534

Query: 601 DENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTD 660
           DENTRS+WD+LS+G  VQE++ I NG   GN +SLLR       N+SQ++MLILQESC D
Sbjct: 535 DENTRSQWDVLSHGNPVQEVSRIPNGSHPGNSISLLR-----GLNASQNSMLILQESCAD 589

Query: 661 PTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLT 720
            + S V+YAP+D+ A NVV++G DP  + LLPSGF ILPD         G A+S GS++T
Sbjct: 590 ASGSLVVYAPIDLPAANVVMSGEDPSAIPLLPSGFTILPD---------GRASSSGSVVT 640

Query: 721 VAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
           VAFQILV S+P+++L+  SVATVN+LI  TVE+IKA+L+C
Sbjct: 641 VAFQILVSSLPSSRLNAESVATVNSLIGTTVEQIKAALNC 680


>gi|356561699|ref|XP_003549117.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 827

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/735 (50%), Positives = 503/735 (68%), Gaps = 49/735 (6%)

Query: 58  IARLREEEFDSTKSGSENHEGASGDDQE----QRPNKKKRYHRHTQHQIQEMEAFFKECP 113
           + R+R++E++S +SGS+N +G SGDDQ+    Q   KKK+YHRHT  QIQE+EAFFKECP
Sbjct: 105 LGRMRDDEYES-RSGSDNFDGGSGDDQDAGDDQPHKKKKKYHRHTPQQIQELEAFFKECP 163

Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYRE 173
           HPD+KQR +LS+ LGLE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KLRA+N   ++
Sbjct: 164 HPDEKQRTDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENMILRQENDKLRAENSVMKD 223

Query: 174 ALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSP 233
           AL+N  C NCGGP   G++S +EH  R+ENARL++E++RI A+A K++G+P+   PL SP
Sbjct: 224 ALANPICNNCGGPAIPGQISLEEHQTRMENARLKDELNRICALANKFLGRPL--SPLASP 281

Query: 234 ---PVPSRPLELAVG--------NFGAQPGIG---GGEMYGAADLLRSISAPT------- 272
              P  +  LELA+G        NFG    +G   G    G++  + ++ A +       
Sbjct: 282 MALPPSNSGLELAIGRNGLGGSSNFGMPLPMGFDVGDGALGSSPAMSTMGARSPMGMMGN 341

Query: 273 --EADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKP- 329
             + ++ M+++LA++AM ELI+MAQ    LW+ S DG   VLN DEY R F   IG KP 
Sbjct: 342 EIQLERSMLLDLALSAMNELIKMAQPDTSLWIKSSDGRNEVLNHDEYARLFSPYIGSKPA 401

Query: 330 TGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGAL 389
            G+  EA+R T VV  + + LVEILMD +QWS +FS +++ A T+EVLS+G  G  +GAL
Sbjct: 402 AGYVTEATRGTGVVSASSLGLVEILMDADQWSEMFSSMIASAATVEVLSSGTGGTRSGAL 461

Query: 390 QVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR----PSPAVRCRRRPS 445
           QVM AE Q+ SPLVP R+  ++R+CK+H EG WAVVDVS+D  R      P + CRR PS
Sbjct: 462 QVMLAEVQLLSPLVPARQVSFLRFCKKHAEGLWAVVDVSVDIGRNVTNSHPLMSCRRLPS 521

Query: 446 GCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASV 505
           GC+IQ+MPNG+S +TWVEH + D+  +H LY+ LVS+G  FGA+RW+ATL RQC+ LA +
Sbjct: 522 GCVIQDMPNGFSNITWVEHSQYDESVIHQLYRPLVSSGIGFGAQRWIATLLRQCDCLAIL 581

Query: 506 MATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLS-GTGADDVRVM 564
            +   P G     T Q GR +M+KLA+RM   FC+G+ AS+A  W  L  G  ADD+R+M
Sbjct: 582 RS---PQGPSEDPTAQAGRTNMMKLAQRMTECFCSGICASSACKWDILHIGNLADDMRIM 638

Query: 565 TRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIA 624
            RK +DDP   PGIVLSA+TS W+PV  KRVFDFLRDEN R EWD+LS  G ++EM HIA
Sbjct: 639 ARK-IDDPTEAPGIVLSASTSVWMPVSRKRVFDFLRDENLRGEWDLLSKDGPMKEMLHIA 697

Query: 625 NGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGD 684
            G+D GNCVS+     L SAN S+ N+L LQES +D + S V+Y+P+++ A+ +V++ GD
Sbjct: 698 KGQDRGNCVSI-----LHSAN-SECNVLYLQESWSDASGSMVVYSPINMQALQMVMSCGD 751

Query: 685 PDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVD-SVPTAKLSLGSVATV 743
             +V L PSGFAILPDGTS +G       S   LLTV  Q+L + +  +AK ++ SV  V
Sbjct: 752 SSFVPLRPSGFAILPDGTSNNGDGSDGGGS--CLLTVGLQMLPNGNHQSAKFTMESVDAV 809

Query: 744 NNLIACTVERIKASL 758
           NNLI+ T++++K +L
Sbjct: 810 NNLISFTIQKVKDAL 824


>gi|223947725|gb|ACN27946.1| unknown [Zea mays]
          Length = 647

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/653 (52%), Positives = 465/653 (71%), Gaps = 41/653 (6%)

Query: 145 MKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
           MKTQ ERHEN  L+ EN+KLRA+NM  REA+ +  C +CG P  +GE+S +E HL +ENA
Sbjct: 1   MKTQLERHENALLKQENDKLRAENMAIREAMRSPMCGSCGSPAMLGEVSLEEQHLCIENA 60

Query: 205 RLREEIDRISAIAAKYVGKP--VVNYPLLSP----PVPSRPLELAVGNFGAQPGIGGGEM 258
           RL++E++R+ A+A K++GKP  V++ P+L P    P+PS  LELAVG       I   + 
Sbjct: 61  RLKDELNRVYALATKFLGKPMPVLSGPMLQPNLSLPMPSSSLELAVGGLRGLGSIPSLDE 120

Query: 259 Y--GAADLLRSISAPTEA-----------DKPMIIELAVAAMEELIRMAQMGEPLWMTSL 305
           +  G +  L ++  P  A           D+ M++ELA++AM+EL+++AQ+ EPLW+ SL
Sbjct: 121 FAGGVSSPLGTVITPARATGSAPPPMVGVDRSMLLELAISAMDELVKLAQVDEPLWLPSL 180

Query: 306 DGT--AAVLNEDEYVRTFPRGIGP-KPTGFKCEASRETAVVIM-NHISLVEILMDVNQWS 361
            G+    +LN +EY  +F   +G  KP G+  EASRE+ +VI+ N ++LVE LMDV +WS
Sbjct: 181 SGSPDKKLLNFEEYAHSFSPSVGAVKPVGYVSEASRESGLVIIDNSLALVETLMDVRRWS 240

Query: 362 TVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGT 421
            +FS ++++A  LE +++G+AG+ NGAL +M AE QV SPLVP RE  ++R+CKQ  EG 
Sbjct: 241 DMFSCMIAKATVLEEVTSGIAGSRNGALLLMKAELQVLSPLVPIREVTFLRFCKQLAEGA 300

Query: 422 WAVVDVSLDNL---------RPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV 472
           WAVVDVS+D L           +  +RCRR PSGC++Q+ PNGY KVTWVE+ E D+  V
Sbjct: 301 WAVVDVSIDGLVRDHNSGTASNAGNIRCRRLPSGCVMQDTPNGYCKVTWVEYTEYDEASV 360

Query: 473 HNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAE 532
           H LY+ L+ +G AFGA+RW+A L RQCE LA +M+ +  +     +  Q+G++SMLKLA 
Sbjct: 361 HQLYRPLIRSGLAFGARRWLAMLQRQCECLAILMSPDTVSANDSSVITQEGKRSMLKLAR 420

Query: 533 RMVISFCAGVSASTAHTWTTLSGTG---ADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP 589
           RM  +FCAGVSAS+A  W+ L G      +DVRVM RKSVD+PG PPG+VLSAATS W+P
Sbjct: 421 RMTENFCAGVSASSAREWSKLDGAAGSIGEDVRVMARKSVDEPGEPPGVVLSAATSVWVP 480

Query: 590 VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQS 649
           V P+++F+FLRDE  R+EWDILSNGG +QEMA+IA G++ GN VSLLR + + SAN  QS
Sbjct: 481 VAPEKLFNFLRDEQLRAEWDILSNGGPMQEMANIAKGQEHGNSVSLLRASAM-SAN--QS 537

Query: 650 NMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANI 709
           +MLILQE+CTD + S V+YAPVDI AM +V+NGGD  YVALLPSGFAILPDG S  GA  
Sbjct: 538 SMLILQETCTDASGSMVVYAPVDIPAMQLVMNGGDSTYVALLPSGFAILPDGPSSVGA-- 595

Query: 710 GEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
            E  +GGSLLTVAFQILV+S PTAKL++ SV TVNNLI CT+++IK +L C++
Sbjct: 596 -EHKTGGSLLTVAFQILVNSQPTAKLTVESVETVNNLIFCTIKKIKTALQCDA 647


>gi|187611421|sp|Q69T58.2|ROC8_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC8; AltName:
           Full=GLABRA 2-like homeobox protein 8; AltName:
           Full=HD-ZIP protein ROC8; AltName: Full=Homeodomain
           transcription factor ROC8; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 8
          Length = 710

 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/711 (49%), Positives = 476/711 (66%), Gaps = 43/711 (6%)

Query: 81  GDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
           G D ++R   +KRYHRHT  QIQ++EA FKECPHPD+ QR +LSRELGLEP Q+KFWFQN
Sbjct: 9   GSDSQRR---RKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIKFWFQN 65

Query: 141 KRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLR 200
           +RTQMK QHER +N  LR EN+K+R +N+  REAL N  CP CGGP  +GE  FDE  LR
Sbjct: 66  RRTQMKAQHERADNCFLRAENDKIRCENIAIREALKNVICPTCGGP-PVGEDYFDEQKLR 124

Query: 201 LENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYG 260
           +ENARL+EE+DR+S + +KY+G+P    P  +PP+    L+L+VG  G  P +    + G
Sbjct: 125 MENARLKEELDRVSNLTSKYLGRPFTQLPPATPPMTVSSLDLSVGGMGG-PSLDLDLLSG 183

Query: 261 AAD-LLRSISAP-TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAA------VL 312
            +  +   + AP ++ ++PM+ E+A  AM+ELIR+AQ G+ +W  S  G  +       L
Sbjct: 184 GSSGIPFQLPAPVSDMERPMMAEMATRAMDELIRLAQAGDHIWSKSPGGGVSGGDARETL 243

Query: 313 NEDEYVRTFPR-GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRA 371
           N D Y   F + G   +      E SRE+ +V+M+ ++L ++ MD N+W   F  IVS+A
Sbjct: 244 NVDTYDSIFSKPGGSYRAPSINVEGSRESGLVLMSAVALADVFMDTNKWMEFFPSIVSKA 303

Query: 372 MTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN 431
            T++VL  G+ G  + +L +M  E  + +P VPTRE  +VRYC+Q  +G WA+ DVS+D 
Sbjct: 304 HTIDVLVNGMGGR-SESLILMYEELHIMTPAVPTREVNFVRYCRQIEQGLWAIADVSVDL 362

Query: 432 LRP----SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLYKQLVSTGNAF 486
            R     +P  R RR PSGCLI +M NGYSKVTWVEH+EV+++  ++ LY+ LV +G AF
Sbjct: 363 QRDAHFGAPPPRSRRLPSGCLIADMANGYSKVTWVEHMEVEEKSPINVLYRDLVLSGAAF 422

Query: 487 GAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSAST 546
           GA RW+A L R CER AS++A  +P    GV    +G++SM+KL++RMV SFC+ + AS 
Sbjct: 423 GAHRWLAALQRACERYASLVALGVPHHIAGV--TPEGKRSMMKLSQRMVNSFCSSLGASQ 480

Query: 547 AHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRS 606
            H WTTLSG+    VRV   +S  DPG+P G+VLSAATS WLPVP   VF F+RDENTRS
Sbjct: 481 MHQWTTLSGSNEVSVRVTMHRST-DPGQPNGVVLSAATSIWLPVPCDHVFAFVRDENTRS 539

Query: 607 EWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFV 666
           +WD+LS+G  VQE++ I NG + GNC+SLLR       N+SQ++MLILQESCTD + S V
Sbjct: 540 QWDVLSHGNQVQEVSRIPNGSNPGNCISLLR-----GLNASQNSMLILQESCTDASGSLV 594

Query: 667 IYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG---------------TSLHGANIGE 711
           +Y+P+DI A NVV++G DP  + LLPSGF ILPDG                +      G 
Sbjct: 595 VYSPIDIPAANVVMSGEDPSSIPLLPSGFTILPDGRPGSAAGASTSSAGPLAAARGGGGG 654

Query: 712 AASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
            A GGS++TVAFQILV S+P++KL+  SVATVN LI  TVE+IKA+L+C +
Sbjct: 655 GAGGGSVVTVAFQILVSSLPSSKLNAESVATVNGLITTTVEQIKAALNCSA 705


>gi|187611422|sp|Q7Y0V7.2|ROC6_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC6; AltName:
           Full=GLABRA 2-like homeobox protein 6; AltName:
           Full=HD-ZIP protein ROC6; AltName: Full=Homeodomain
           transcription factor ROC6; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 6
          Length = 872

 Score =  670 bits (1728), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/782 (48%), Positives = 502/782 (64%), Gaps = 88/782 (11%)

Query: 60  RLREEEFDSTKSGSENHEGASGD----DQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHP 115
           R REEE DS +SGS+N +GASGD    D      KKKRYHRHT  QIQE+EA FKECPHP
Sbjct: 89  RGREEENDS-RSGSDNLDGASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHP 147

Query: 116 DDKQRKELSRELGLEPLQVKFWFQNKRTQMK-TQHERHENTQLRTENEKLRADNMRYREA 174
           D+KQR ELSR L LE  QVKFWFQN+RTQMK TQ ERHEN  LR EN+KLRA+NM  REA
Sbjct: 148 DEKQRMELSRRLNLESRQVKFWFQNRRTQMKQTQIERHENALLRQENDKLRAENMTIREA 207

Query: 175 LSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPP 234
           + N  C +CGG   +GE+S +E HLR+ENARL++E+DR+ A+A K++G+P+ +     PP
Sbjct: 208 MRNPMCASCGGAAVLGEVSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSISSPGPP 267

Query: 235 V--PSRPLELAVGN---------------------FGAQPGIGGGEMYGAADLL------ 265
                  LEL VG+                      G   G+ GG +  AA  L      
Sbjct: 268 SLQACSGLELGVGSNGGFGLGALGASAAMQSIPDLMGGSSGLTGGPVGSAAMRLPAGIGG 327

Query: 266 ------RSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVR 319
                  + +     D+ +++ELA+AAM+EL+++AQM EPLW+ SLDG    LN DEY R
Sbjct: 328 LDGAMHAAAADGGAIDRAVLLELALAAMDELVKVAQMDEPLWLPSLDGGFETLNYDEYHR 387

Query: 320 TFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
            F R +G  P G+  EA+RE+ + I++ + LV+ LMD  +WS +F  +V+RA T +++S+
Sbjct: 388 AFARVVGQCPAGYVSEATRESGIAIISSVDLVDSLMDAPRWSEMFPCVVARASTTDIISS 447

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTW-AVVDVSLDNLRPSP-- 436
           G+ G  +G++Q+M AE QV SPLVP RE  ++R+CKQH EG W  V       LRP    
Sbjct: 448 GMGGTRSGSIQLMHAELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAVLRPDQNG 507

Query: 437 --------AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGA 488
                    + CR  P+GC++Q+M NGYSKVTWV H E D+   H LY+ L+ +G A GA
Sbjct: 508 GGGSSSSSYMGCRLLPTGCIVQDMNNGYSKVTWVVHAEYDETAAHQLYRPLLRSGQALGA 567

Query: 489 KRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAH 548
           +RW+A+L RQC+ LA + + ++P  +   IT   GR+SMLKLA+RM  +FCAGV AS A 
Sbjct: 568 RRWLASLQRQCQYLAILCSNSLPARDHAAITPV-GRRSMLKLAQRMTDNFCAGVCASAAQ 626

Query: 549 TWTTLS--------------GTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP-VPPK 593
            W  L               G G D VR+M R SV  PG PPG+VLSA TS  LP   P+
Sbjct: 627 KWRRLDEWRGEGGGGGGGGGGDGEDKVRMMARHSVGAPGEPPGVVLSATTSVRLPGTLPQ 686

Query: 594 RVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLI 653
           RVFD+LRDE  R +WDIL+NG  +QEM HIA G+  GN VSLLR N   + + +Q+NMLI
Sbjct: 687 RVFDYLRDEQRRGDWDILANGEAMQEMDHIAKGQHHGNAVSLLRPN---ATSGNQNNMLI 743

Query: 654 LQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPD----GTSLHGANI 709
           LQE+CTD + S V+YAPVD+ +M+VV+NGGD  YV+LLPSGFAILPD    G S   A +
Sbjct: 744 LQETCTDSSGSLVVYAPVDVQSMHVVMNGGDSAYVSLLPSGFAILPDGHNNGASPSPAEV 803

Query: 710 GEAAS-------------GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKA 756
           G  AS              GSL+TVAFQILV+++PTAKL++ SV TV+NL++CT+++IK+
Sbjct: 804 GSGASPNSAAGGGGGSNNTGSLVTVAFQILVNNLPTAKLTVESVDTVSNLLSCTIQKIKS 863

Query: 757 SL 758
           +L
Sbjct: 864 AL 865


>gi|125571186|gb|EAZ12701.1| hypothetical protein OsJ_02619 [Oryza sativa Japonica Group]
          Length = 840

 Score =  667 bits (1721), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/767 (48%), Positives = 494/767 (64%), Gaps = 90/767 (11%)

Query: 60  RLREEEFDSTKSGSENHEGASGD----DQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHP 115
           R REEE DS +SGS+N +GASGD    D      KKKRYHRHT  QIQE+EA FKECPHP
Sbjct: 89  RGREEENDS-RSGSDNLDGASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHP 147

Query: 116 DDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREAL 175
           D+KQR ELSR L LE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KLRA+NM  REA+
Sbjct: 148 DEKQRMELSRRLNLESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMTIREAM 207

Query: 176 SNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPV 235
            N  C +CGG   +GE+S +E HLR+ENARL++E+DR+ A+A K++G+P+ +     PP 
Sbjct: 208 RNPMCASCGGAAVLGEVSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSISSPGPPS 267

Query: 236 --PSRPLELAVGN---------------------FGAQPGIGGGEMYGAADLL------- 265
                 LEL VG+                      G   G+ GG +  AA  L       
Sbjct: 268 LQACSGLELGVGSNGGFGLGALGASAAMQSIPDLMGGSSGLTGGPVGSAAMRLPAGIGGL 327

Query: 266 -----RSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRT 320
                 + +     D+ +++ELA+AAM+EL+++AQM EPLW+ SLDG    LN DEY R 
Sbjct: 328 DGAMHAAAADGGAIDRAVLLELALAAMDELVKVAQMDEPLWLPSLDGGFETLNYDEYHRA 387

Query: 321 FPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTG 380
           F R +G  P G+  EA+RE+ + I++ + LV+ LMD  +WS +F  +V+RA T +++S+G
Sbjct: 388 FARVVGQCPAGYVSEATRESGIAIISSVDLVDSLMDAPRWSEMFPCVVARASTTDIISSG 447

Query: 381 VAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTW-AVVDVSLDNLRPSP--- 436
           + G  +G++Q+M AE QV SPLVP RE  ++R+CKQH EG W  V       LRP     
Sbjct: 448 MGGTRSGSIQLMHAELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAVLRPDQNGG 507

Query: 437 -------AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAK 489
                   + CR  P+GC++Q+M NGYSKVTWV H E D+   H LY+ L+ +G A GA+
Sbjct: 508 GGSSSSSYMGCRLLPTGCIVQDMNNGYSKVTWVVHAEYDETAAHQLYRPLLRSGQALGAR 567

Query: 490 RWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHT 549
           RW+A+L RQC+ LA + + ++P  +   IT   GR+SMLKLA+RM  +FCAG        
Sbjct: 568 RWLASLQRQCQYLAILCSNSLPARDHAAITPV-GRRSMLKLAQRMTDNFCAG-------- 618

Query: 550 WTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEW 608
                    D VR+M R SV  PG PPG+VLSA TS  LP   P+RVFD+LRDE  R +W
Sbjct: 619 ---------DKVRMMARHSVGAPGEPPGVVLSATTSVRLPGTLPQRVFDYLRDEQRRGDW 669

Query: 609 DILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIY 668
           DIL+NG  +QEM HIA G+  GN VSLLR N   + + +Q+NMLILQE+CTD + S V+Y
Sbjct: 670 DILANGEAMQEMDHIAKGQHHGNAVSLLRPN---ATSGNQNNMLILQETCTDSSGSLVVY 726

Query: 669 APVDIVAMNVVLNGGDPDYVALLPSGFAILPD----GTSLHGANIGEAAS---------- 714
           APVD+ +M+VV+NGGD  YV+LLPSGFAILPD    G S   A +G  AS          
Sbjct: 727 APVDVQSMHVVMNGGDSAYVSLLPSGFAILPDGHNNGASPSPAEVGSGASPNSAAGGGGG 786

Query: 715 ---GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
               GSL+TVAFQILV+++PTAKL++ SV TV+NL++CT+++IK++L
Sbjct: 787 SNNTGSLVTVAFQILVNNLPTAKLTVESVDTVSNLLSCTIQKIKSAL 833


>gi|242063218|ref|XP_002452898.1| hypothetical protein SORBIDRAFT_04g034580 [Sorghum bicolor]
 gi|241932729|gb|EES05874.1| hypothetical protein SORBIDRAFT_04g034580 [Sorghum bicolor]
          Length = 707

 Score =  664 bits (1712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/711 (49%), Positives = 476/711 (66%), Gaps = 44/711 (6%)

Query: 81  GDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
           G D ++R   KKRYHRHT  QIQ++EA FKECPHPD+ QR +LSRELGLEP Q+KFWFQN
Sbjct: 11  GSDAQRR---KKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSRELGLEPRQIKFWFQN 67

Query: 141 KRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLR 200
           +RTQMK QHER +N  LR EN+K+R +N+  REAL    C  CGGP    +  FDE  LR
Sbjct: 68  RRTQMKAQHERQDNCFLRAENDKIRCENIAMREALRTVICHTCGGPPVTDDY-FDEQKLR 126

Query: 201 LENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGI------- 253
           +ENARL+EE+DR+S++ +KY+G+P+   P + P   S  L+L+VG  G+ P +       
Sbjct: 127 MENARLKEELDRVSSLTSKYLGRPITQLPPVQPLSMSSSLDLSVGGLGS-PALGPSLDLD 185

Query: 254 ---GGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTA- 309
              GG   Y    L  ++S   E ++PM+ E+A  AM+ELIRMAQ GE LW+ +  G   
Sbjct: 186 LLSGGSSGYPPFHLPMTVS---EMERPMMAEMATRAMDELIRMAQAGEHLWVKTAGGGPD 242

Query: 310 --AVLNEDEYVRTFPRGIGP-KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSG 366
              VLN D Y   F +  G  +      E SR++ +V M+ I LV++ MD ++++  F  
Sbjct: 243 GREVLNVDTYDSIFAKPGGSFRGPDVHVEGSRDSGLVFMSAIGLVDMFMDSSKFTEFFPA 302

Query: 367 IVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVD 426
           IVS+A T++VL  G+AG  + +L +M  E  + SP+VPTRE  ++RYC+Q   G WA+ D
Sbjct: 303 IVSKARTMDVLVNGMAGRSD-SLVLMYEELHMMSPVVPTREFCFLRYCRQIEHGLWAIAD 361

Query: 427 VSLDNLRP-----SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQLV 480
           +S+D  +      +P  R  R PSGCLI +M +G SKVTWVEH+E++DR  +H LY+ L+
Sbjct: 362 ISVDLQQRDARFGAPPSRSCRLPSGCLIADMADGSSKVTWVEHMEIEDRVPIHLLYRDLI 421

Query: 481 STGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI-TNQDGRKSMLKLAERMVISFC 539
            +G AFGA RW+A L R CER A +    +P  ++       +G++SM+KL++RMV SFC
Sbjct: 422 LSGAAFGAHRWLAALQRACERCACLATAGMPHRDIAAAGVTPEGKRSMMKLSQRMVSSFC 481

Query: 540 AGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFL 599
           A +SAS  H WTTLSG     VRVM  +S  DPG+P G+VLSAATS WLPVP  RVF F+
Sbjct: 482 ASLSASQLHRWTTLSGPNDVGVRVMVHRST-DPGQPSGVVLSAATSIWLPVPCDRVFAFV 540

Query: 600 RDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCT 659
           RDE+TRS+WD+LS+G  VQE++ I NG   GNC+SLLR       N+SQ++MLILQESCT
Sbjct: 541 RDEHTRSQWDVLSHGNPVQEVSRIPNGSHPGNCISLLR-----GLNASQNSMLILQESCT 595

Query: 660 DPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG--------TSLHGANIGE 711
           D + S V+YAP+DI A NVV++G DP  + LLPSGF ILPDG        +S  G  +G 
Sbjct: 596 DASGSLVVYAPIDIPAANVVMSGEDPSAIPLLPSGFTILPDGRPGASSSSSSAAGGTLGA 655

Query: 712 AASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
            A+ GSL+TVAFQILV S+P++KL+  SVATVN+LI+ TVE+IKA+L+C S
Sbjct: 656 TAAAGSLVTVAFQILVSSLPSSKLNAESVATVNSLISTTVEQIKAALNCAS 706


>gi|242076842|ref|XP_002448357.1| hypothetical protein SORBIDRAFT_06g025750 [Sorghum bicolor]
 gi|241939540|gb|EES12685.1| hypothetical protein SORBIDRAFT_06g025750 [Sorghum bicolor]
          Length = 817

 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/727 (49%), Positives = 481/727 (66%), Gaps = 65/727 (8%)

Query: 89  NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK-- 146
            +K+RY+RHT HQI  +EA FKE PHPD+KQR ELS++LGLEP QVKFWFQN+RT  K  
Sbjct: 101 KRKRRYNRHTPHQIARLEAMFKEFPHPDEKQRAELSKQLGLEPRQVKFWFQNRRTNAKCL 160

Query: 147 -------------TQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMS 193
                         Q ER EN +L+ EN+KLR +N+  REA+ +  C  CGGP  +G++S
Sbjct: 161 TWLSLLHGPEPGKNQMERQENARLKQENDKLRVENLSIREAMRDLVCSGCGGPAVLGDLS 220

Query: 194 FDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLS-----PPVPSRPLELAVGNFG 248
            +E HLRLENARLR+E+ R+  + AK++GKP+ +  LL+      P+P   LELAV    
Sbjct: 221 LEERHLRLENARLRDELARVCTLTAKFIGKPMSHMELLAVAEEPHPMPGSSLELAVAG-- 278

Query: 249 AQPGIGGG------------EMYGA-ADLLRSISAP--------TEADKPMIIELAVAAM 287
              G+G G            E+ G+ +  + ++  P           DK    +LAV+AM
Sbjct: 279 ---GVGSGVPSSKMPVSTISELAGSTSSAMGTVITPMVTASLPMVSIDKSKFAQLAVSAM 335

Query: 288 EELIRMAQMGEPLWMTSLDG----TAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVV 343
            EL++MAQ  EPLW+ S       T   LN  EY++ F   +G K  GF  EASRE+ +V
Sbjct: 336 NELVKMAQTNEPLWIPSASSPGSPTMETLNFKEYLKAFTPCVGVKRNGFVSEASRESGIV 395

Query: 344 IMNH-ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPL 402
            ++   +LVE  MD  +WS +FS IV++A T+E +S GVAG+ NGAL +M AE QV SPL
Sbjct: 396 TVDSSAALVEAFMDERRWSDMFSCIVAKAATIEEISPGVAGSRNGALLLMQAELQVLSPL 455

Query: 403 VPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAV----RCRRRPSGCLIQEMPNGYSK 458
           VP RE  ++R+CKQ  E  WAVVDVS+D L+    +    +CRR PSGC++Q+ PNG  K
Sbjct: 456 VPIREVTFLRFCKQLAESAWAVVDVSIDGLQMDHCLATNTKCRRLPSGCVLQDTPNG-CK 514

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMAT-NIPTGEVGV 517
           VTWVEH E  +  VH LY+ L+ +G A GA RW+ATL RQCE LA +M++  +P  +   
Sbjct: 515 VTWVEHAEYPEASVHQLYQPLLCSGLALGAGRWLATLQRQCECLAILMSSLAVPEHDSEA 574

Query: 518 ITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSG-TGA--DDVRVMTRKSVDDPGR 574
           ++  +G++S+LKLA RM+ +FCAG+SAS++  W+ L G TG+   DVRVM + SVD+PG 
Sbjct: 575 VS-LEGKRSLLKLARRMMENFCAGMSASSSCEWSILDGLTGSMGKDVRVMVQNSVDEPGV 633

Query: 575 PPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVS 634
           PPG+VLS AT+ WLPV P+R+F+FLRDE  R+EWDILSNGG +Q+M  I  G+  GN V+
Sbjct: 634 PPGVVLSVATAVWLPVTPERLFNFLRDEELRAEWDILSNGGPMQQMLRITKGQLDGNSVT 693

Query: 635 LLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
           LLR +     NS  +++LILQE+CTD + + V+YAPVD  AM +V+ GGD   VALLPSG
Sbjct: 694 LLRAD---HTNSHLNSILILQETCTDRSGAMVVYAPVDFPAMQLVIGGGDSTNVALLPSG 750

Query: 695 FAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERI 754
           F ILPDG+S     +G   + GSLLTVAFQILV+S PTAKL++ SV TV NLI+CT+E+I
Sbjct: 751 FVILPDGSSSSAGGVGH-KTCGSLLTVAFQILVNSQPTAKLTVESVDTVYNLISCTIEKI 809

Query: 755 KASLSCE 761
           +A+L C+
Sbjct: 810 RAALHCD 816


>gi|413939125|gb|AFW73676.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 735

 Score =  659 bits (1700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/741 (48%), Positives = 479/741 (64%), Gaps = 76/741 (10%)

Query: 81  GDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
           G D ++R   KKRYHRHT  QIQ++EA FKECPHPD+ QR +LSRELGLEP Q+KFWFQN
Sbjct: 11  GSDAQRR---KKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSRELGLEPRQIKFWFQN 67

Query: 141 KRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLR 200
           +RTQMK QHER +N  LR EN+K+R +N+  +EAL N  CP CGGP  + +  FDE  LR
Sbjct: 68  RRTQMKAQHERQDNCFLRAENDKIRCENIAMQEALRNVICPTCGGPP-VADDHFDEQKLR 126

Query: 201 LENARLREE----------------------------------IDRISAIAAKYVGKPVV 226
           +ENARL+EE                                  +DR+S++ +KY+G+P+ 
Sbjct: 127 MENARLKEEASRFAFTIALAPGPASLDGPAILPRSSFTFTSGDLDRVSSLTSKYLGRPIT 186

Query: 227 NYPLLSPPVPSRPLELAVGNFGAQPGI------GGGEMYGAADLLRSISAPTEADKPMII 280
             P  +  +    L+L+VG  G  P +      GG   Y    LL    A +E ++PM+ 
Sbjct: 187 QLP-SAQALSMSSLDLSVGGLGG-PSLDLDLLSGGSSGYPPFHLLP--MAVSEMERPMMA 242

Query: 281 ELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP-KPTGFKCEASRE 339
           E+A  AM+ELIRMAQ GE LW+ +  G   VLN D Y   F +  G  +      E SRE
Sbjct: 243 EMATRAMDELIRMAQAGEHLWVKT--GGREVLNVDTYDSIFAKPDGSFRGPDVHVEGSRE 300

Query: 340 TAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVP 399
           T +V M+ I LV++ MD ++W+ +F  IVS+A T++VL  G+ G    +L +M  E  V 
Sbjct: 301 TGLVFMSAIGLVDMFMDSSKWTELFPAIVSKARTVDVLVNGMGGRSE-SLLLMYEELHVM 359

Query: 400 SPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP-----SPAVRCRRRPSGCLIQEMPN 454
           SP+VPTRE  ++RYC+Q   G WA+ D+S+D  +      +P  R  R PSGCLI +M +
Sbjct: 360 SPVVPTREFCFLRYCRQIEHGLWAIADISVDQQQRDARFGAPPSRSCRLPSGCLIADMAD 419

Query: 455 GYSKVTWVEHVEVDDR-GVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI-PT 512
           G SKVTWVEH+E++DR  +H LY+ LV +G AFGA RW+A L R CER A +    I P 
Sbjct: 420 GSSKVTWVEHMEIEDRVPIHLLYRDLVLSGAAFGAHRWLAALQRACERCACLATAGIMPH 479

Query: 513 GEV---GVITNQ-------DGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVR 562
            ++   G I+++       +G++SM+KL++RMV SFCA +SAS  H WTTLSG     VR
Sbjct: 480 RDIAAAGDISHRELLAVTPEGKRSMMKLSQRMVNSFCASLSASQLHRWTTLSGPNDVGVR 539

Query: 563 VMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAH 622
           VM  +S  DPG+P G+VLSAATS WLPVP  R F F+RDE+TRS+WD+LS+G  VQE++ 
Sbjct: 540 VMVHRST-DPGQPSGVVLSAATSIWLPVPCDRAFAFVRDEHTRSQWDVLSHGNPVQEVSR 598

Query: 623 IANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNG 682
           I NG   GNC+SLLR       N+SQ++MLILQESCTD + S V+YAP+DI A NVV++G
Sbjct: 599 IPNGSHPGNCISLLR-----GLNASQNSMLILQESCTDASGSLVVYAPIDIPAANVVMSG 653

Query: 683 GDPDYVALLPSGFAILPDGT-SLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVA 741
            DP  + LLPSGF+ILPDG      +  G+A S GSL+TVAFQILV S+P+AKL+  SVA
Sbjct: 654 EDPSAIPLLPSGFSILPDGRPGASSSRAGQAPSAGSLVTVAFQILVSSLPSAKLNAESVA 713

Query: 742 TVNNLIACTVERIKASLSCES 762
           TVN+LI+ TVE+IKA+L+C S
Sbjct: 714 TVNSLISTTVEQIKAALNCAS 734


>gi|51091201|dbj|BAD35894.1| putative homeobox [Oryza sativa Japonica Group]
          Length = 734

 Score =  656 bits (1693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/735 (48%), Positives = 476/735 (64%), Gaps = 67/735 (9%)

Query: 81  GDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
           G D ++R   +KRYHRHT  QIQ++EA FKECPHPD+ QR +LSRELGLEP Q+KFWFQN
Sbjct: 9   GSDSQRR---RKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIKFWFQN 65

Query: 141 KRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLR 200
           +RTQMK QHER +N  LR EN+K+R +N+  REAL N  CP CGGP  +GE  FDE  LR
Sbjct: 66  RRTQMKAQHERADNCFLRAENDKIRCENIAIREALKNVICPTCGGP-PVGEDYFDEQKLR 124

Query: 201 LENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYG 260
           +ENARL+EE+DR+S + +KY+G+P    P  +PP+    L+L+VG  G  P +    + G
Sbjct: 125 MENARLKEELDRVSNLTSKYLGRPFTQLPPATPPMTVSSLDLSVGGMGG-PSLDLDLLSG 183

Query: 261 AAD-LLRSISAP-TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAA------VL 312
            +  +   + AP ++ ++PM+ E+A  AM+ELIR+AQ G+ +W  S  G  +       L
Sbjct: 184 GSSGIPFQLPAPVSDMERPMMAEMATRAMDELIRLAQAGDHIWSKSPGGGVSGGDARETL 243

Query: 313 NEDEYVRTFPR-GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRA 371
           N D Y   F + G   +      E SRE+ +V+M+ ++L ++ MD N+W   F  IVS+A
Sbjct: 244 NVDTYDSIFSKPGGSYRAPSINVEGSRESGLVLMSAVALADVFMDTNKWMEFFPSIVSKA 303

Query: 372 MTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN 431
            T++VL  G+ G  + +L +M  E  + +P VPTRE  +VRYC+Q  +G WA+ DVS+D 
Sbjct: 304 HTIDVLVNGMGGR-SESLILMYEELHIMTPAVPTREVNFVRYCRQIEQGLWAIADVSVDL 362

Query: 432 LRP----SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLYKQLVSTGNAF 486
            R     +P  R RR PSGCLI +M NGYSKVTWVEH+EV+++  ++ LY+ LV +G AF
Sbjct: 363 QRDAHFGAPPPRSRRLPSGCLIADMANGYSKVTWVEHMEVEEKSPINVLYRDLVLSGAAF 422

Query: 487 GAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSAST 546
           GA RW+A L R CER AS++A  +P    GV    +G++SM+KL++RMV SFC+ + AS 
Sbjct: 423 GAHRWLAALQRACERYASLVALGVPHHIAGV--TPEGKRSMMKLSQRMVNSFCSSLGASQ 480

Query: 547 AHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRS 606
            H WTTLSG+    VRV   +S  DPG+P G+VLSAATS WLPVP   VF F+RDENTRS
Sbjct: 481 MHQWTTLSGSNEVSVRVTMHRST-DPGQPNGVVLSAATSIWLPVPCDHVFAFVRDENTRS 539

Query: 607 ------------------------EWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQ 642
                                   +WD+LS+G  VQE++ I NG + GNC+SLLR     
Sbjct: 540 QVSHPLSPPLISLTHSLCPPLLLLQWDVLSHGNQVQEVSRIPNGSNPGNCISLLR----- 594

Query: 643 SANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG- 701
             N+SQ++MLILQESCTD + S V+Y+P+DI A NVV++G DP  + LLPSGF ILPDG 
Sbjct: 595 GLNASQNSMLILQESCTDASGSLVVYSPIDIPAANVVMSGEDPSSIPLLPSGFTILPDGR 654

Query: 702 --------------TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLI 747
                          +      G  A GGS++TVAFQILV S+P++KL+  SVATVN LI
Sbjct: 655 PGSAAGASTSSAGPLAAARGGGGGGAGGGSVVTVAFQILVSSLPSSKLNAESVATVNGLI 714

Query: 748 ACTVERIKASLSCES 762
             TVE+IKA+L+C +
Sbjct: 715 TTTVEQIKAALNCSA 729


>gi|356529736|ref|XP_003533444.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Glycine max]
          Length = 807

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/741 (45%), Positives = 486/741 (65%), Gaps = 47/741 (6%)

Query: 61  LREEEFDSTKSGSENH-EGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           LR +E   + SGSE   E  SG++QE  ++P KKKRYHRHT  QIQEMEA FKECPHPDD
Sbjct: 60  LRGKEEVESGSGSEQLVEDKSGNEQESHEQPTKKKRYHRHTARQIQEMEALFKECPHPDD 119

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSN 177
           KQR +LS ELGL+P QVKFWFQN+RTQMK Q +R +N  LR ENE L+++N R + AL N
Sbjct: 120 KQRLKLSHELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAENESLKSENYRLQAALRN 179

Query: 178 ASCPNCGGPTAIG-EMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNY---PLLSP 233
             CPNCGGP  +G +M  DEH +R+ENARLREE++R+  +  +Y G+P+      P L  
Sbjct: 180 VICPNCGGPCIMGADMGLDEHQVRIENARLREELERVCCLTTRYTGRPIQTMATGPTLM- 238

Query: 234 PVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAP-------TEADKPMIIELAVAA 286
             PS  L++++        I          +L   ++P        E +K + +ELA ++
Sbjct: 239 -APSLDLDMSIYPRHFADTIAPCTEMIPVPMLPPEASPFSEGGILMEEEKSLTLELAASS 297

Query: 287 MEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF--PRGIGPKPTGFKCEASRETAVVI 344
           M EL++M Q  EPLW+ S +    VLN +E+ R F  P+ +  + +  + EASR+T+VVI
Sbjct: 298 MAELVKMCQTNEPLWIRSTESEREVLNFEEHARMFAWPQNLKHR-SELRTEASRDTSVVI 356

Query: 345 MNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVP 404
           MN ++LV+  +D  +W  +F  IVSRA T++++S+G +G  +G LQ+M AEFQV SPLV 
Sbjct: 357 MNSVTLVDAFLDAQKWMELFPTIVSRAKTVQIISSGASGLASGTLQLMYAEFQVLSPLVS 416

Query: 405 TRESYYVRYCKQHG-EGTWAVVDVSLD----NLRPSPAVRCRRRPSGCLIQEMPNGYSKV 459
           TRE++++RYC+Q+  EGTWA+VD  +D    N  PS    CRR  SGC+IQ+MPNGYS+V
Sbjct: 417 TRETHFLRYCQQNAEEGTWAIVDFPVDSFHQNFHPSYPRYCRRS-SGCVIQDMPNGYSRV 475

Query: 460 TWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVIT 519
           TWVEH +V+++ VH ++   V +G AFGA+RW+  L RQCER+AS+MA NI   ++G I 
Sbjct: 476 TWVEHAKVEEKPVHQIFCNYVYSGMAFGAQRWLGVLQRQCERVASLMARNI--SDLGAIP 533

Query: 520 NQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIV 579
           + + RK+++KLA+RM+ +F   +S S   +WT +S +  D VR+ TRK + +PG+P G++
Sbjct: 534 SPEARKNLMKLAQRMIKTFSLNMSTSGGQSWTAISDSPEDTVRITTRK-ITEPGQPNGVI 592

Query: 580 LSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVN 639
           LSA ++ WLP    +VFD LRDE  RS+ D LSNG  + E+AHIANG   GNC+SLLR+N
Sbjct: 593 LSAVSTTWLPYSHTKVFDLLRDERRRSQMDALSNGNSLNEVAHIANGSHPGNCISLLRIN 652

Query: 640 CLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 699
              ++NSSQ+  L+LQE+CTD + S V+Y  +D+ ++ + ++G DP  +ALLP GF I+P
Sbjct: 653 V--ASNSSQNVELMLQENCTDQSGSIVVYTTIDVDSIQLAMSGEDPSCIALLPQGFKIVP 710

Query: 700 -----------------DGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVAT 742
                            + +S    ++    SGG LLT+  Q+L  ++P+AKL+L SV  
Sbjct: 711 MSSPPNNVDTPIIDAATNSSSEPPPSLNNNNSGGCLLTMGLQVLASTIPSAKLNLSSVTA 770

Query: 743 VNNLIACTVERIKASLSCESA 763
           +NN +  T+ +I+A+LS  S+
Sbjct: 771 INNHLCNTLHQIEAALSSSSS 791


>gi|22475197|gb|AAM97322.1| homeodomain protein GhHOX2 [Gossypium hirsutum]
          Length = 775

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/720 (46%), Positives = 478/720 (66%), Gaps = 39/720 (5%)

Query: 62  REEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQ 119
           +EE   S +   E   G+  + QE  ++P KKKRYHRHT HQIQE+EA FKECPHPDDKQ
Sbjct: 57  KEENGSSLRGKEEMKSGSESELQETTEQPLKKKRYHRHTAHQIQELEAVFKECPHPDDKQ 116

Query: 120 RKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNAS 179
           R +LS+ELGL+P QVKFWFQN+RTQMK Q +R EN  LR EN+ L+++  R +  LS   
Sbjct: 117 RMKLSQELGLKPRQVKFWFQNRRTQMKAQQDRSENGILRAENDSLKSEFYRLQAELSKLV 176

Query: 180 CPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRP 239
           CPNCGGP   G +SFDE  LR+ENARL EE++R+ AIA++Y+G+P+     L PP     
Sbjct: 177 CPNCGGPPVPGGVSFDE--LRIENARLGEELERVCAIASRYIGRPIQTMGELMPP----S 230

Query: 240 LELAVGNFGAQ-------PGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIR 292
           LEL +  +  Q       P +     Y   + L  +    E +K + +ELA++A +EL++
Sbjct: 231 LELDMNIYPRQFLEPMPPPILSETPSYLDNNNLILM----EEEKTIAMELAMSATDELVK 286

Query: 293 MAQMGEPLWMTSLDGTAAVLNEDEYVRTF--PRGIGPKPTGFKCEASRETAVVIMNHISL 350
           M +  EPLW+ +      VLN DE+ R F  P  +  + + F+ EASR+++VVIMN I+L
Sbjct: 287 MCRTNEPLWVRNNKTGKEVLNLDEHSRMFHWPLNLKQRSSEFRTEASRDSSVVIMNSITL 346

Query: 351 VEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYY 410
           V+  ++ ++W  +F  IV+RA  ++V+S GV+G  NG LQ+M AE  V SPLVPTRE+Y+
Sbjct: 347 VDAFVNAHKWMELFPSIVARAKCVQVISQGVSGT-NGCLQLMYAELHVLSPLVPTREAYF 405

Query: 411 VRYCKQHG---EGTWAVVDVSLDNLRPSPAVRC---RRRPSGCLIQEMPNGYSKVTWVEH 464
           +RYC+Q     E  WA+VD  LD    S        +RRPSGCLIQ+MPNGYS+VTWVEH
Sbjct: 406 LRYCQQQNVEDETYWAIVDFPLDGFHNSLQTSFPLYKRRPSGCLIQDMPNGYSRVTWVEH 465

Query: 465 VEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGR 524
            E++++ +H ++   V +G AFGA RW+A L+RQCER+AS+MATNIP  ++GVI + + R
Sbjct: 466 AEIEEKPIHQIFSHFVHSGMAFGANRWLAVLERQCERVASLMATNIP--DIGVIPSPEAR 523

Query: 525 KSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAAT 584
           K++++L++RM+ +FC  +S+ +   WT +  +  D VR+ TRK V + G+P G++L A +
Sbjct: 524 KNLMRLSQRMIRTFCVNISSCSGQVWTAVPDSTDDTVRITTRK-VSEAGQPNGLILCAVS 582

Query: 585 SFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSA 644
           + WLP P   VFD LRDE  R++ ++LSNG  + E+AHIANG   GNC+SLLR+N   S+
Sbjct: 583 TTWLPYPHHHVFDLLRDERRRAQLEVLSNGNALHEVAHIANGSHPGNCISLLRINV--SS 640

Query: 645 NSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP----- 699
           NSSQ   L+LQESCT+ + S V+Y+ VD+ ++ + ++G DP  + LLP GF I P     
Sbjct: 641 NSSQHVDLMLQESCTNKSGSLVVYSTVDVDSVQLAMSGEDPSCIPLLPLGFFITPMELVN 700

Query: 700 DGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           DG     AN G   + GSLLTV  Q+L  ++P+AK++L S+A +NN +  TV++I ++LS
Sbjct: 701 DGGCKDEAN-GHNITTGSLLTVGLQVLASTIPSAKINLSSIAAINNHLCTTVQQISSALS 759


>gi|357485047|ref|XP_003612811.1| Homeobox-leucine zipper protein ROC3 [Medicago truncatula]
 gi|355514146|gb|AES95769.1| Homeobox-leucine zipper protein ROC3 [Medicago truncatula]
          Length = 801

 Score =  653 bits (1684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/743 (45%), Positives = 484/743 (65%), Gaps = 44/743 (5%)

Query: 55  ESEIARLREEEFDSTKSGSENHEGASGDDQE----QRPNKKKRYHRHTQHQIQEMEAFFK 110
           E  I R +EE  D + SGSE  E  SG++QE    Q+  KKKRYHRHT  QIQEMEA FK
Sbjct: 50  EEGILRGKEEIMDQSGSGSEQVEDKSGNEQEINNEQQATKKKRYHRHTARQIQEMEALFK 109

Query: 111 ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMR 170
           ECPHPDDKQR +LS +LGL+P QVKFWFQN+RTQMK Q +R +N  LR ENE L+ +N R
Sbjct: 110 ECPHPDDKQRLKLSHDLGLKPRQVKFWFQNRRTQMKAQQDRSDNVILRAENESLKNENYR 169

Query: 171 YREALSNASCPNCGGPTAIG-EMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYP 229
            + AL N  CPNCGGP  +G +M FD+H LR ENARL+EE++R+  I ++Y G+P+    
Sbjct: 170 LQSALRNILCPNCGGPCIMGPDMGFDDHQLRFENARLKEELERVCCITSRYTGRPLQT-- 227

Query: 230 LLSPPV----PSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEA-------DKPM 278
            ++PP     PS  L++ +      P     EM     L    S   E        +K +
Sbjct: 228 -MAPPSSLMPPSLDLDMNIYPRHFDPMPPCTEMIPVPMLPPEPSQFQEGGLLLMEDEKSL 286

Query: 279 IIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTG-FKCEAS 337
            +ELA ++M EL++M QM EPLW+ S +    VLN DE+ R F   +  K     + EA+
Sbjct: 287 AMELAASSMAELVKMCQMNEPLWIRS-ENDREVLNFDEHARVFQWPLNLKQRNELRNEAT 345

Query: 338 RETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQ 397
           R++AVVIMN ++LV+  +D  +W  +F  IV+RA T++++++G +G+ +G LQ+M AEFQ
Sbjct: 346 RDSAVVIMNSVTLVDAFLDAQKWMELFPTIVARARTVQIIASGASGHASGTLQLMHAEFQ 405

Query: 398 VPSPLVPTRESYYVRYCKQHG-EGTWAVVDVSLDNLRPSPAVRCR---RRPSGCLIQEMP 453
           V SPLV TRE++++RYC+Q+  EGTWA+VD  +D+ + +    C    RR SGC+IQ+MP
Sbjct: 406 VLSPLVSTRETHFLRYCQQNAEEGTWAIVDFPVDSFQQNFHNSCPKYCRRSSGCVIQDMP 465

Query: 454 NGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTG 513
           NGYS+VTWVEH +V ++ VH ++   V +G AFGA+RW+  L RQCER+AS+MA NI   
Sbjct: 466 NGYSRVTWVEHAKVVEKPVHQIFSNYVYSGMAFGAQRWLGVLQRQCERVASLMARNI--S 523

Query: 514 EVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPG 573
           ++GVI + + RKS++KLA RM+ +F   ++     +WT +S +  D VR+ TRK + +PG
Sbjct: 524 DLGVIPSPEARKSLMKLANRMIKTFSLNMTTCGGQSWTAISDSPEDTVRITTRK-ITEPG 582

Query: 574 RPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCV 633
           +P G++L+A ++ WLP    +VFD LRDE  RS+ D LSNG  + E+AHIANG   GNC+
Sbjct: 583 QPSGVILAAVSTTWLPYTHTKVFDLLRDERHRSQMDALSNGNSLNEVAHIANGSHPGNCI 642

Query: 634 SLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPS 693
           SLLR+N   ++NSSQ+  L+LQESCTD + S V+Y  VD+ ++ + ++G DP  +ALLP 
Sbjct: 643 SLLRINV--ASNSSQNVELMLQESCTDQSGSLVVYTTVDVDSVQLAMSGQDPSCIALLPQ 700

Query: 694 GFAILP------DGTSLHGAN-------IGEAASGGSLLTVAFQILVDSVPTAKLSLGSV 740
           GF I+P      D +S  G            AA+ G LL +  Q+L  ++P+AKL+L SV
Sbjct: 701 GFMIVPMVSSNADTSSEQGVTGTPSSTASANAANSGCLLIMGMQVLASTIPSAKLNLSSV 760

Query: 741 ATVNNLIACTVERIKASLSCESA 763
             +NN +  T+ +I+++L C S+
Sbjct: 761 TAINNHLCNTLHQIESAL-CSSS 782


>gi|357168220|ref|XP_003581542.1| PREDICTED: homeobox-leucine zipper protein ROC4-like [Brachypodium
           distachyon]
          Length = 790

 Score =  650 bits (1676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/749 (47%), Positives = 485/749 (64%), Gaps = 45/749 (6%)

Query: 51  QNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKR-YHRHTQHQIQEMEAFF 109
           ++ SE+E  R R    D     S    G   D     P K+KR Y RH+  QIQE++A F
Sbjct: 48  RSASEAENER-RSRTIDHLDVVSGGGFGRDDDAACGMPRKRKRPYVRHSSEQIQELQALF 106

Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNM 169
            +CPHPD+ QR ELSR L L+P QVKFWFQN+RTQ K +  R EN QLR EN++LRA+N+
Sbjct: 107 DKCPHPDEMQRAELSRRLFLDPSQVKFWFQNRRTQTKAKLVRDENVQLRQENDRLRAENL 166

Query: 170 RYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPV-VNY 228
             REA+ +  C NCG P  +G +S +E HLR +NARL EE+ R+ A +++++GK + +  
Sbjct: 167 CIREAMRHPVCGNCGRPVVLGVLSLEEQHLRAQNARLTEELSRVCAASSEFLGKSISLPA 226

Query: 229 PLLS---PPVPSRPLELAVGNFGAQPG-----------IGGGEMYGAADLLRSISAPTE- 273
           PL +    P+P   ++ A G  G+ P             G         ++     P E 
Sbjct: 227 PLQTHQPEPMPGSRVQPAAGGVGSVPSTTVASSTITEFTGTASTSSGTAIMTMSEEPLEI 286

Query: 274 --ADKPMIIELAVAAMEELIRMAQMGEPLWMTSL---DGTAA-VLNEDEYVRTFPRGIGP 327
              DK +++ELA +AM+EL++MAQM +PLW  S+   D  A   LN +EY+ TF   IG 
Sbjct: 287 AGIDKSVLLELAKSAMDELVKMAQMEDPLWTPSVSLSDSPAKETLNYEEYLNTFSPCIGV 346

Query: 328 KPTGFKCEASRETAVVIM-NHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
           KP GF+ EASRE+ +VI  + ++LVE LMD  +WS +FS +V+++ T+  +STGVAG+ +
Sbjct: 347 KPAGFQSEASRESGIVISDDSVALVEALMDERRWSNIFSCMVAKSSTIAEISTGVAGSRD 406

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL---------RPSPA 437
           GAL ++ AE QV SPLVP R++ ++R+CKQ GEG WAVVDVS+D L           +  
Sbjct: 407 GALLLIQAELQVLSPLVPIRKATFLRFCKQLGEGAWAVVDVSIDGLVVDQGLAAASTTAN 466

Query: 438 VRCRRRPSGCLIQE-MPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD 496
           + CRR PSGCL+Q+   NG+ KV WVEH E D+  VH LY+ L+ +G A GA RW+ATL 
Sbjct: 467 MNCRRLPSGCLVQQDTRNGFCKVKWVEHAEYDESSVHPLYRSLLRSGLALGAGRWLATLQ 526

Query: 497 RQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGT 556
           RQC+  A++ +      +        G +S+LKLA+RM+ SF +GVSAS+A  W+ L G 
Sbjct: 527 RQCKCWATLQSCVAAWEQYSSDVLAAGTQSLLKLAQRMMESFFSGVSASSALEWSKLDGF 586

Query: 557 G---ADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSN 613
                +DVR++ RKSVD+PG PPG+VL AATS W+ V P+R+F FL DE TR+EWDILS 
Sbjct: 587 TDNIGNDVRIIERKSVDEPGVPPGVVLCAATSVWMLVTPERLFQFLCDEGTRAEWDILST 646

Query: 614 GGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDI 673
           GG +QE+ +IA G+  GN VSLLR N   + N+ Q+ +LILQE+CTD + S V+YAPVDI
Sbjct: 647 GGPMQEVTNIAKGQQDGNTVSLLRTN---TTNTQQNGILILQETCTDASGSMVVYAPVDI 703

Query: 674 VAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILV-DSVPT 732
            AM++V++GGD   V LLPSGF ILPDG ++ G       + GSLLT AFQILV +S PT
Sbjct: 704 PAMHLVMSGGDSASVPLLPSGFVILPDGPTIPGDG---HKTCGSLLTFAFQILVKNSEPT 760

Query: 733 AKLSLGSVATVNNLIACTVERIKASLSCE 761
           AKL++ S+ TVNNLI+CT+ RIK +L C+
Sbjct: 761 AKLTVESIQTVNNLISCTINRIKTALHCD 789


>gi|302783435|ref|XP_002973490.1| hypothetical protein SELMODRAFT_450557 [Selaginella moellendorffii]
 gi|300158528|gb|EFJ25150.1| hypothetical protein SELMODRAFT_450557 [Selaginella moellendorffii]
          Length = 684

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/567 (57%), Positives = 414/567 (73%), Gaps = 33/567 (5%)

Query: 77  EGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 134
           EGAS +DQE   +P +K+R+HRHT  QIQEME  FKECPHPD+KQR +LSRELGLEP QV
Sbjct: 56  EGASSEDQEPSDQPPRKRRFHRHTLRQIQEMEMVFKECPHPDEKQRMQLSRELGLEPRQV 115

Query: 135 KFWFQNKRTQMKT----------QHERHENTQLRTENEKLRADNMRYREALSNASCPNCG 184
           KFWFQN+RTQMK             ER EN+ LR ENE+LR++N+  REAL NA+CP+CG
Sbjct: 116 KFWFQNRRTQMKVSIKVFEENQAHQERAENSMLRAENERLRSENIAMREALKNATCPHCG 175

Query: 185 GPTAIGEMSFDEHHLRLENARLREEI--DRISAIAAKYVGKPVVNYPL---LSPPVPSRP 239
           GP  +GEMS+DE  LR+ENA L++E+  DR+S++AAKY+ KP    P    +   +P   
Sbjct: 176 GPATLGEMSYDEQQLRIENAHLKDEVQLDRVSSLAAKYLSKPGGGAPHGLSVQTSLPGTS 235

Query: 240 LELAVGNFGAQPGIGGGEMYGAADLLRSISAP---TEADKPMIIELAVAAMEELIRMAQM 296
           L+ +   FG Q         G + +L   + P   ++ +KP++ ELA+ AMEEL+ +AQ 
Sbjct: 236 LDPSAAAFGPQSNSALAVTPGPS-MLELATRPGGLSQVEKPLVAELAIIAMEELLALAQS 294

Query: 297 GEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMD 356
            EPLW+   +G    LN +EY++ F RG+GP P G K E +R+T +V+MN  +LV+ +MD
Sbjct: 295 REPLWILEENGAKESLNGEEYMQQFSRGLGPTPVGLKAEVTRDTGLVMMNGAALVDTIMD 354

Query: 357 VNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ-VMTAEFQVPSPLVPTRESYYVRYCK 415
             +W  +FS I+SRA+T EVLSTGV GN+N ALQ VM AEFQV SPLVPTRE+Y++RYCK
Sbjct: 355 A-RWMDMFSCIISRALTSEVLSTGVGGNWNNALQLVMYAEFQVLSPLVPTREAYFLRYCK 413

Query: 416 QHGEGTWAVVDVSLDNLR--PSPAVRCRRRPSGCLIQEMPNGYSKV------TWVEHVEV 467
           QH EG WA+VDVS+D LR  P P +R R RPSG LIQ+MPNGYSKV      T ++H+E 
Sbjct: 414 QHAEGVWAIVDVSVDGLRENPPPQLRNRLRPSGFLIQDMPNGYSKVSHGFQVTILQHMEY 473

Query: 468 DDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSM 527
           DDR V+N+Y+ LVS+G AFGAKRW+ATL RQCERLA ++ATNI   ++G I+N  GR+SM
Sbjct: 474 DDRQVNNMYRGLVSSGLAFGAKRWLATLQRQCERLAVLLATNISPRDLGGISNATGRRSM 533

Query: 528 LKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFW 587
           LKLA+RM  +FCAGVSAST HTWTTLSG+G DDVRVMTRKS+D+PG PPGIVLSAATS W
Sbjct: 534 LKLAQRMTNNFCAGVSASTVHTWTTLSGSGEDDVRVMTRKSIDNPGEPPGIVLSAATSLW 593

Query: 588 LPVPPKRVFDFLRDENTRSEWDILSNG 614
           +PV P+RVF+FLRD+  RSE  IL  G
Sbjct: 594 MPVSPQRVFEFLRDDRLRSE--ILPEG 618



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 53/71 (74%), Gaps = 5/71 (7%)

Query: 697 ILPDG-----TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTV 751
           ILP+G     T+   ++   ++  G LLTVAFQILV +VPTAKL+L SV TVN+LI+CTV
Sbjct: 614 ILPEGPRSIGTTPETSSRASSSEPGCLLTVAFQILVSNVPTAKLNLESVTTVNSLISCTV 673

Query: 752 ERIKASLSCES 762
           +RIK +LSCE+
Sbjct: 674 QRIKTALSCET 684


>gi|8920421|emb|CAB96422.1| OCL2 protein [Zea mays]
          Length = 725

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/725 (47%), Positives = 477/725 (65%), Gaps = 44/725 (6%)

Query: 73  SENHEGASGDDQEQRPNKKKR-YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
           S+  +G S  D +   +K+K+ Y+RH   QI+++EA FKE  HPD+KQR +LSR+LGL+P
Sbjct: 7   SDPKQGMSFGDLDGGGSKRKKPYNRHAPRQIEQLEAMFKEFHHPDEKQRAQLSRQLGLDP 66

Query: 132 LQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGE 191
            QVKFWFQN+RT +K Q ER EN +L+ EN+KLR +N+  REA+ +  C  CGGP  +GE
Sbjct: 67  RQVKFWFQNRRTHLKNQLERQENARLKQENDKLRVENLSIREAIRDLVCSCCGGPAVLGE 126

Query: 192 MSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSP----PVPSRPLELAVGNF 247
           +S +EH LRLENARLR+E+ R+  + +K++GKP+ +  LL      P+    LELAV   
Sbjct: 127 LSPEEHQLRLENARLRDELARVCTVTSKFIGKPMSHMELLLAKEPHPITGSSLELAVA-V 185

Query: 248 GAQPGIGGGEM----------------YGAADLLRSISAPTEA---DKPMIIELAVAAME 288
           G   G+   +M                      + + S P  +   DK    +LAV+AM 
Sbjct: 186 GVGSGVPSSKMPVSTISELAGSTSSSTGTVTTPMVTASLPMVSIVIDKSKFAQLAVSAMN 245

Query: 289 ELIRMAQMGEPLWMTSLDGTAA----VLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVI 344
           EL++MA+M EPLW+ ++    +     LN  EY++ F   +G KPTGF  EASRE+ +V 
Sbjct: 246 ELVKMARMNEPLWIPTIPSPGSPIMETLNFKEYLKAFSPCVGVKPTGFVSEASRESGIVT 305

Query: 345 MN-HISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLV 403
           ++   +L+E+ MD  +WS +F  IV++A  +E +  GVAG+ NGAL +M AE Q+ SP V
Sbjct: 306 IDSSAALMEVFMDERRWSDIFYCIVAKASIVEEILPGVAGSRNGALLLMQAELQMLSPRV 365

Query: 404 PTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAV----RCRRRPSGCLIQEMPNGYSKV 459
           P RE  ++R+CKQ  EG WAVVDVS+D L+    +    +CRR PSGC++Q+ PNG  KV
Sbjct: 366 PIREVTFLRFCKQLAEGAWAVVDVSIDGLQTDQCLDTNTKCRRLPSGCVLQDTPNG-CKV 424

Query: 460 TWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVIT 519
           TWVEH E  +  VH LY+ L+ +G A GA RW+ATL RQCE LA +M++           
Sbjct: 425 TWVEHAEYPEASVHQLYQPLMRSGLALGAGRWLATLQRQCECLAILMSSLAAPEHDSAAV 484

Query: 520 NQDGRKSMLKLAERMVISFCAGVSASTAHTWTT---LSGTGADDVRVMTRKSVDDPGRPP 576
           + +G+ S+LKLA RM+ +FCAG+ AS++  W+    L+G+   DVRVM + SVD+PG PP
Sbjct: 485 SLEGKWSLLKLARRMMENFCAGMGASSSREWSMLDGLTGSTGKDVRVMVQNSVDEPGVPP 544

Query: 577 GIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLL 636
           G+VLS AT+ WLPV  +R+ +FLRDE  R+EWDILSNGG +Q++  +  G+  GN V+LL
Sbjct: 545 GVVLSVATAVWLPVTTERLLNFLRDEELRAEWDILSNGGPMQQVLRVTKGQLDGNSVALL 604

Query: 637 RVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFA 696
           R +     +S  +++LILQE+CTD + + V+YAPVD  AM +VL GGD   VALLPSGF 
Sbjct: 605 RSD---HTDSHLNSILILQETCTDRSGAMVVYAPVDFPAMQLVLGGGDSKNVALLPSGFV 661

Query: 697 ILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKA 756
           ILP G+S  G  +G  A  GSLLTVAFQILV+S PTAKL++ SV TV +LI+CT+E+IKA
Sbjct: 662 ILPAGSSAGG--VGHKAR-GSLLTVAFQILVNSQPTAKLTVESVDTVYSLISCTIEKIKA 718

Query: 757 SLSCE 761
           +L C+
Sbjct: 719 ALHCD 723


>gi|224071383|ref|XP_002303433.1| predicted protein [Populus trichocarpa]
 gi|222840865|gb|EEE78412.1| predicted protein [Populus trichocarpa]
          Length = 774

 Score =  645 bits (1665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/728 (46%), Positives = 481/728 (66%), Gaps = 38/728 (5%)

Query: 61  LREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK 118
           +R +E   + SGSE  E  SG++QE  ++P KKKRYHRHT  QIQEMEA FKECPHPDDK
Sbjct: 55  MRGKEEMESGSGSEQLEDRSGNEQESSEQPPKKKRYHRHTAAQIQEMEAMFKECPHPDDK 114

Query: 119 QRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNA 178
           QR  LS+ELGL+P QVKFWFQN+RTQMK Q +R +N  LR ENE L+ DN R +  L N 
Sbjct: 115 QRMRLSQELGLKPRQVKFWFQNRRTQMKAQQDRSDNLILRAENESLKNDNYRLQAELRNL 174

Query: 179 SCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPV---VNYPLLSPPV 235
            CPNCGG   +G + F+E  LRLENARLR+E++R+  I ++Y G+ +   V  P   PP 
Sbjct: 175 ICPNCGGQAMLGAIPFEE--LRLENARLRDELERVCCITSRYGGRQIHSMVPVPSFVPPS 232

Query: 236 PSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEA-------DKPMIIELAVAAME 288
               + +    F    G     M     +L   S+  EA        K + +ELA+++M+
Sbjct: 233 LDLDMNMYSRPFPEYLGTCTDMMPVPVPVLEEPSSFPEAGVVLMEEGKGLAMELALSSMD 292

Query: 289 ELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF--PRGIGPKPTGFKCEASRETAVVIMN 346
           EL++M    EPLW+ +++    VLN +E+ R F  P  +    +  + EA+R+ AVVIMN
Sbjct: 293 ELVKMCHANEPLWIRNIENGKEVLNLEEHGRMFPWPSNLKQNSSETRTEATRDCAVVIMN 352

Query: 347 HISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTR 406
            I+LV+  +D N+W  +F  IV+RA T++V++ G++G  +G+L +M AE QV SPLVPTR
Sbjct: 353 SITLVDAFLDANKWMELFPSIVARAKTVQVITPGISG-ASGSLHLMYAELQVLSPLVPTR 411

Query: 407 ESYYVRYCKQH-GEGTWAVVDVSL----DNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTW 461
           E+Y++R+C Q+  EGTWA+VD  L    DN++PS  +  +R PSGC+IQ+MPNGYS+VTW
Sbjct: 412 ETYFLRFCHQNVEEGTWAIVDFPLDRLHDNIQPSFPLY-KRHPSGCVIQDMPNGYSRVTW 470

Query: 462 VEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQ 521
           +EH E++++ VH ++ Q V +G AFGA RW+  L RQCER+AS+MA NI   ++GVI + 
Sbjct: 471 IEHAEIEEKPVHQIFSQYVYSGMAFGAHRWLTVLQRQCERVASLMARNI--SDLGVIPSP 528

Query: 522 DGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLS 581
           + RK+M++LA+RM+  F   +S+S+  +WT LS +  D VR+ TRK + +PG+P G++LS
Sbjct: 529 EARKNMMRLAQRMIRIFSLNISSSSGQSWTGLSDSYDDTVRITTRK-ITEPGQPNGVILS 587

Query: 582 AATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCL 641
           A ++ WLP P  +VFD LRDE+ RS+ ++LSNG  + E+AHIANG   GNC+SLLR+N  
Sbjct: 588 AVSTTWLPYPHYQVFDLLRDEHRRSQLELLSNGNALHEVAHIANGSHPGNCISLLRINV- 646

Query: 642 QSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-- 699
            ++NSSQ   L+LQE CTD + S V+Y  VD+ ++ + ++G DP  + LLP GF I+P  
Sbjct: 647 -ASNSSQHVELMLQECCTDQSGSLVVYTTVDVESIQLAMSGEDPSCIPLLPLGFVIVPVE 705

Query: 700 ------DGTSL--HGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTV 751
                 +G S+  +  +     + G LLTV  Q+L  ++P+AKL+L SV  +NN +  TV
Sbjct: 706 SSSAVSEGNSMPSNSEDGNGHNNSGCLLTVGLQVLASTIPSAKLNLSSVTAINNHLCNTV 765

Query: 752 ERIKASLS 759
            +I A+LS
Sbjct: 766 NQITAALS 773


>gi|255555881|ref|XP_002518976.1| homeobox protein, putative [Ricinus communis]
 gi|223541963|gb|EEF43509.1| homeobox protein, putative [Ricinus communis]
          Length = 810

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/729 (45%), Positives = 483/729 (66%), Gaps = 46/729 (6%)

Query: 63  EEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQR 120
           ++E DS  SGSE  E  SG++QE  ++P KKKRYHRHT  QIQEME+ FKECPHPDDKQR
Sbjct: 58  KDEMDS-GSGSEQLEEKSGNEQESSEQPPKKKRYHRHTARQIQEMESLFKECPHPDDKQR 116

Query: 121 KELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASC 180
            +LS++LGL+P QVKFWFQN+RTQMK Q +R +N  LR ENE L++DN R +  L N  C
Sbjct: 117 MKLSQDLGLKPRQVKFWFQNRRTQMKAQQDRADNIILRAENETLKSDNYRLQAELRNLIC 176

Query: 181 PNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPV-PSRP 239
           P+CGGP  +G +SF+E  LRLENARLR+E++R+  +A++Y G+P+       P + PS  
Sbjct: 177 PSCGGPAMLGGISFEE--LRLENARLRDELERVCCVASRYGGRPIQAIGPAPPFIPPSLE 234

Query: 240 LELAVGN--FGAQPGIGGGEMYGAADLLRSISAPTEA-------DKPMIIELAVAAMEEL 290
           L++++ +  F    G     M  +  +L   S  TEA       +K + +E A+++M+EL
Sbjct: 235 LDMSIYSKLFPDSLGTCNEMMPMSMPMLPDTSCLTEAGLVLMEEEKALAMEFALSSMDEL 294

Query: 291 IRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTG---FKCEASRETAVVIMNH 347
           ++M    EPLW+ + +    VLN +E+ R F   +  K       + EA+R++AVVIMN 
Sbjct: 295 VKMCHTTEPLWIRNNEIGKEVLNFEEHERRFRWPLNLKQQNSNELRSEATRDSAVVIMNS 354

Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
           I+LV+  +D N+W  +F  IV+ A T+++L++GV+G  +G+L +M AE QV SPLVPTRE
Sbjct: 355 ITLVDAFLDANKWMELFPSIVAMARTVQILTSGVSGP-SGSLHLMHAELQVLSPLVPTRE 413

Query: 408 SYYVRYCKQH-GEGTWAVVDVSLDNLRPSPAVRC---RRRPSGCLIQEMPNGYSKVTWVE 463
           +Y++RYC+Q+  EGTWA+VD  +D+            RRRPSGC+IQ+MPNGYS+VTWVE
Sbjct: 414 AYFLRYCQQNVEEGTWAIVDFPIDSFHEDIQASFPLYRRRPSGCVIQDMPNGYSRVTWVE 473

Query: 464 HVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDG 523
           H E +++ VH ++   V +G AFGA RW+  L RQCER+AS+MA NI   ++GVI + + 
Sbjct: 474 HAETEEKPVHQIFSHFVYSGMAFGAHRWLGVLQRQCERVASLMARNI--SDLGVIPSPEA 531

Query: 524 RKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAA 583
           RK++++LA+RM+ +FC  +S  +  +WT LS +  D VR+ TRK + +PG+P G++LSA 
Sbjct: 532 RKNLMRLAQRMIRTFCMNISTCSGQSWTALSDSSDDTVRITTRK-ITEPGQPNGVILSAV 590

Query: 584 TSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQS 643
           ++ WLP P  +VFD LRDE  RS+ D+LSNG  + E+AHIANG   GNC+SLLR+N   +
Sbjct: 591 STTWLPYPHYQVFDILRDERRRSQLDVLSNGNALHEVAHIANGSHPGNCISLLRINV--A 648

Query: 644 ANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP---- 699
           +NSSQ   L+LQESCTD + S ++Y  V++ ++ + ++G DP  + LLP GF I+P    
Sbjct: 649 SNSSQHVELMLQESCTDQSGSLIVYTTVNVDSIQLAMSGEDPSCIPLLPLGFVIVPVESI 708

Query: 700 ----------DGTSLHGA----NIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNN 745
                     +G S+  +    N G   + G LLT+  Q+L  ++P+AKL+L +V  +NN
Sbjct: 709 TSTSKDTGGNEGNSIKSSEENGNTGHGCTSGCLLTIGLQVLASTIPSAKLNLSTVNAINN 768

Query: 746 LIACTVERI 754
            +  TV +I
Sbjct: 769 HLRSTVHQI 777


>gi|345195198|tpg|DAA34964.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 687

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/700 (50%), Positives = 475/700 (67%), Gaps = 37/700 (5%)

Query: 77  EGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKF 136
           E    D Q QR    KRYHRHT  QIQ++EA FKECPHPD+ QR  LSRELGLEP Q+KF
Sbjct: 6   EPEGSDSQRQR----KRYHRHTPRQIQQLEAMFKECPHPDENQRAALSRELGLEPRQIKF 61

Query: 137 WFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDE 196
           WFQN+RTQMK QHER +N  LR EN+K+R +N+  REAL N  CP+CGGP  + E  FDE
Sbjct: 62  WFQNRRTQMKAQHERADNCFLRAENDKIRCENITMREALKNVICPSCGGP-PVDEDFFDE 120

Query: 197 HHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPS---RPLELAVGNFGAQ--P 251
             LR+ENARL+EE+DR+S+I +KY+G+P        PPVP+     L+L+VG  G+   P
Sbjct: 121 QKLRMENARLKEELDRVSSITSKYLGRPFTQM----PPVPTMSVSSLDLSVGGMGSLGGP 176

Query: 252 GIGGGEMYG-AADLLRSISAP-TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTA 309
            +    + G ++ L   + AP TE ++PM++++A  AM+ELIR+AQ GE +W+  + G A
Sbjct: 177 SLDLDLLSGCSSGLPYQVPAPVTEMERPMMVDMAARAMDELIRLAQAGEQIWVKGVPGDA 236

Query: 310 -AVLNEDEYVRTFPR-GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGI 367
             VL+   Y   F + G   +P     EASR++ +V M+ ++LV++ MD N+W   F GI
Sbjct: 237 REVLDVGTYDSLFAKPGAAFRPPDINVEASRDSGLVFMSAVALVDVFMDTNKWMEFFPGI 296

Query: 368 VSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDV 427
           VS+A T++VL  G+ G  + +L +M  E  + +P+VPTRE  ++RYCKQ  +G WAV DV
Sbjct: 297 VSKAQTVDVLVNGLGGR-SESLIMMYEELHIMTPVVPTRELSFLRYCKQIEQGLWAVADV 355

Query: 428 SLDNLR------PSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQLV 480
           SL+  R      PS   R RR PSGCLI +M NGYSKVTWVEH+E++    ++ LY+ LV
Sbjct: 356 SLEGQRDAHYGVPS---RSRRMPSGCLIADMSNGYSKVTWVEHMEIEQMLPINVLYRNLV 412

Query: 481 STGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCA 540
            +G AFGA RW+A L R CER ASV    +P  +V  +T  +G++SM KL++RMV SFCA
Sbjct: 413 LSGAAFGAHRWLAALQRACERFASVATLGVPHHDVAGVT-PEGKRSMTKLSQRMVSSFCA 471

Query: 541 GVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLR 600
            +S+S    WT LSGT    VRV T +S D  G+P G+VLSAATS WLPVP   VF F+R
Sbjct: 472 SLSSSPLQRWTLLSGTTDVSVRVSTHRSTDS-GQPNGVVLSAATSIWLPVPGDHVFAFVR 530

Query: 601 DENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTD 660
           DEN RS+WD+LS+G  VQE++ I NG + GNC+SLLR       N++Q++MLILQESCTD
Sbjct: 531 DENARSQWDVLSHGNQVQEVSRIPNGSNPGNCISLLR-----GLNANQNSMLILQESCTD 585

Query: 661 PTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLT 720
            + + V+Y+P+DI A NVV++G DP  + LLPSGFAILP  +    ++       G ++T
Sbjct: 586 ASGALVVYSPIDIPAANVVMSGEDPSGIPLLPSGFAILPG-SGAGASSSAVVPPPGCVVT 644

Query: 721 VAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
           VAFQILV ++P+++L+  SVATVN+LI  TV++IKA+L+C
Sbjct: 645 VAFQILVSNLPSSRLNAESVATVNSLIGTTVQQIKAALNC 684


>gi|15219456|ref|NP_177479.1| homeobox-leucine zipper protein HDG11 [Arabidopsis thaliana]
 gi|75263138|sp|Q9FX31.1|HDG11_ARATH RecName: Full=Homeobox-leucine zipper protein HDG11; AltName:
           Full=HD-ZIP protein HDG11; AltName: Full=Homeodomain
           GLABRA 2-like protein 11; AltName: Full=Homeodomain
           transcription factor HDG11; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 11
 gi|11120798|gb|AAG30978.1|AC012396_14 homeobox protein, putative [Arabidopsis thaliana]
 gi|28393178|gb|AAO42020.1| putative homeobox protein [Arabidopsis thaliana]
 gi|28827208|gb|AAO50448.1| putative homeobox protein [Arabidopsis thaliana]
 gi|332197328|gb|AEE35449.1| homeobox-leucine zipper protein HDG11 [Arabidopsis thaliana]
          Length = 722

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/698 (47%), Positives = 462/698 (66%), Gaps = 35/698 (5%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           KKKRYHRHT  QIQ +E+ FKECPHPD+KQR +LSRELGL P Q+KFWFQN+RTQ+K QH
Sbjct: 32  KKKRYHRHTAQQIQRLESSFKECPHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQLKAQH 91

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREE 209
           ER +N+ L+ EN+K+R +N+  REAL +A CPNCGGP    +  FDE  LR+ENA LREE
Sbjct: 92  ERADNSALKAENDKIRCENIAIREALKHAICPNCGGPPVSEDPYFDEQKLRIENAHLREE 151

Query: 210 IDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAV------GNFGAQPGI------GGGE 257
           ++R+S IA+KY+G+P+     L  P+   PL+L++      G FG  P +      G   
Sbjct: 152 LERMSTIASKYMGRPISQLSTLH-PMHISPLDLSMTSLTGCGPFGHGPSLDFDLLPGSSM 210

Query: 258 MYGAADLLRSIS--APTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNED 315
             G  + L+S    A ++ DKP++  +A+ AMEEL+R+ Q  EPLW T  DG   +LN  
Sbjct: 211 AVGPNNNLQSQPNLAISDMDKPIMTGIALTAMEELLRLLQTNEPLW-TRTDGCRDILNLG 269

Query: 316 EYVRTFPRGIGP-KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTL 374
            Y   FPR     K   F+ EASR + +V MN ++LV++ MD  +W+ +F  I++ + TL
Sbjct: 270 SYENVFPRSSNRGKNQNFRVEASRSSGIVFMNAMALVDMFMDCVKWTELFPSIIAASKTL 329

Query: 375 EVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP 434
            V+S+G+ G + GAL ++  E +V SPLV TRE   +RYC+Q  +G+W VV+VS D  + 
Sbjct: 330 AVISSGMGGTHEGALHLLYEEMEVLSPLVATREFCELRYCQQTEQGSWIVVNVSYDLPQF 389

Query: 435 SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLYKQLVSTGNAFGAKRWVA 493
               +  R PSGCLIQ+MPNGYSKVTWVEH+E +++  VH LY++++  G AFGA RWV 
Sbjct: 390 VSHSQSYRFPSGCLIQDMPNGYSKVTWVEHIETEEKELVHELYREIIHRGIAFGADRWVT 449

Query: 494 TLDRQCERLASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTT 552
           TL R CER AS+      + ++ GVI + +G++SM++LA+RM+ ++C  VS S     T 
Sbjct: 450 TLQRMCERFASLSVPASSSRDLGGVILSPEGKRSMMRLAQRMISNYCLSVSRSNNTRSTV 509

Query: 553 LSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILS 612
           +S      +RV   KS +    P G VL AAT+FWLP  P+ VF+FL+DE TR +WD+LS
Sbjct: 510 VSELNEVGIRVTAHKSPE----PNGTVLCAATTFWLPNSPQNVFNFLKDERTRPQWDVLS 565

Query: 613 NGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQS-NMLILQESCTDPTASFVIYAPV 671
           NG  VQE+AHI+NG   GNC+S+LR      +N++ S NMLILQES TD + +FV+Y+PV
Sbjct: 566 NGNAVQEVAHISNGSHPGNCISVLR-----GSNATHSNNMLILQESSTDSSGAFVVYSPV 620

Query: 672 DIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAA------SGGSLLTVAFQI 725
           D+ A+N+ ++G DP Y+ LL SGF I PDG   +    G +       + GSL+TV FQI
Sbjct: 621 DLAALNIAMSGEDPSYIPLLSSGFTISPDGNGSNSEQGGASTSSGRASASGSLITVGFQI 680

Query: 726 LVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
           +V ++PTAKL++ SV TVNNLI  TV +IK +LS  +A
Sbjct: 681 MVSNLPTAKLNMESVETVNNLIGTTVHQIKTALSGPTA 718


>gi|33355394|gb|AAQ16127.1| homeodomain protein BNLGHi6863 [Gossypium hirsutum]
          Length = 762

 Score =  640 bits (1650), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 331/719 (46%), Positives = 472/719 (65%), Gaps = 39/719 (5%)

Query: 62  REEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQ 119
           +EE     +   E   G+  + QE  ++P KKKRYHRHT HQIQE+EA FKECPHPDDKQ
Sbjct: 46  KEENGSLLRGKEEMKSGSESELQETTEQPLKKKRYHRHTAHQIQELEAVFKECPHPDDKQ 105

Query: 120 RKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNAS 179
           R +LS+ELGL+P QVKFWFQN+RTQMK Q +R E+  LR EN+ L+++  R +  LS   
Sbjct: 106 RMKLSQELGLKPRQVKFWFQNRRTQMKAQQDRSEDVILRAENDSLKSEFYRLQAELSKLV 165

Query: 180 CPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRP 239
           CPNCGGP   G +SFDE  LR+ENARL EE++R+ AIA++Y+G+P+     L PP     
Sbjct: 166 CPNCGGPPVPGGVSFDE--LRIENARLGEELERVCAIASRYIGRPIQTMGALMPP----S 219

Query: 240 LELAVGNFGAQ------PGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRM 293
           LEL +  +  Q      P +     Y   + L  +    E +K + +ELA++A +EL +M
Sbjct: 220 LELDMNIYPRQFLEPMPPTLSETPSYPDNNNLILM----EEEKTIAMELAMSATDELAKM 275

Query: 294 AQMGEPLWMTSLDGTAAVLNEDEYVRTF--PRGIGPKPTGFKCEASRETAVVIMNHISLV 351
            +   P    + +    VLN DE+ R F  P  +  + + F+ EASR+++VVIMN I+LV
Sbjct: 276 CRTN-PFGFVNNETGKEVLNLDEHSRMFHWPLNLKQRSSEFRTEASRDSSVVIMNSITLV 334

Query: 352 EILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYV 411
           +  +D N+W  +F  IV+RA  ++V+S GV+G  NG LQ+M AE    SPLVPTRE+Y++
Sbjct: 335 DAFVDANKWMELFPSIVARAKCVQVISQGVSGT-NGCLQLMYAELHCLSPLVPTREAYFL 393

Query: 412 RYCKQHG---EGTWAVVDVSLDNLRPSPAVRC---RRRPSGCLIQEMPNGYSKVTWVEHV 465
           RYC+Q     E  WA+VD  LD    S        +RRPSGCLIQ+MPNGYS+VTWVEH 
Sbjct: 394 RYCQQQNVEDETYWAIVDFPLDGFHNSLQTSFPLYKRRPSGCLIQDMPNGYSRVTWVEHA 453

Query: 466 EVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK 525
           E++++ +H ++   V +G AFGA RW+A L+RQCER+AS+MATNIP  ++GVI + + RK
Sbjct: 454 EIEEKPIHQIFSHFVHSGMAFGANRWLAVLERQCERIASLMATNIP--DIGVIPSPEARK 511

Query: 526 SMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATS 585
           ++++L++RM+ +FC  +S+ +   WT +  +  D VR+ TRK V + G+P G++L A ++
Sbjct: 512 NLMRLSQRMIRTFCVNISSCSGQVWTAVPDSSDDTVRITTRK-VSEAGQPNGLILCAVST 570

Query: 586 FWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSAN 645
            WLP P   VFD LRDE  R++ ++LSNG  + E+AHIANG   GNC+SLLR+N   S+N
Sbjct: 571 TWLPYPHHHVFDLLRDERRRAQLEVLSNGNALHEVAHIANGSHPGNCISLLRINV--SSN 628

Query: 646 SSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-----D 700
           SSQ   L+LQESCT+ + S V+Y+ VD+ ++ + ++G DP  + LLP GF I P     D
Sbjct: 629 SSQHVDLMLQESCTNKSGSLVVYSTVDVDSVQLAMSGEDPSCIPLLPLGFFITPMGLVND 688

Query: 701 GTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           G     AN G   + GSLLTV  Q+L  ++P+AK++L S+A +NN +  TV++I ++LS
Sbjct: 689 GGCKDEAN-GHNITTGSLLTVGLQVLASTIPSAKINLSSIAAINNHLCTTVQQISSALS 746


>gi|413919222|gb|AFW59154.1| outer cell layer2 [Zea mays]
          Length = 863

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 342/739 (46%), Positives = 474/739 (64%), Gaps = 70/739 (9%)

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           +++P +KK Y+RHT  QI+++EA FKE  HPD+KQR +LSR+LGL+P QVKFWFQN+RT 
Sbjct: 131 QRKPKRKKPYNRHTPRQIEQLEAMFKEFHHPDEKQRAQLSRQLGLDPRQVKFWFQNRRTH 190

Query: 145 MKT---------------QHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAI 189
           +K                Q ER EN +L+ EN+KLR +N+  REA+ +  C  CGGP  +
Sbjct: 191 LKCLTWLSLLHGPELGKNQLERQENARLKHENDKLRVENLSIREAIRDLVCSCCGGPAVL 250

Query: 190 GEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSP----PVPSRPLELAVG 245
           GE+S +EH LRLENARLR+E+ R+  + +K++GKP+ +  LL      P+    LELAV 
Sbjct: 251 GELSPEEHQLRLENARLRDELARVCTVTSKFIGKPMSHMELLLAKEPHPMTGSSLELAVA 310

Query: 246 NFGAQPGIGGGEM----------------YGAADLLRSISAP-TEADKPMIIELAVAAME 288
             G    +   +M                      + + S P    DK    +LAV+AM 
Sbjct: 311 -VGVGSSVPSSKMPVSTISELAGSTSSSTGTVTTPMVTASLPMVSIDKSKFAQLAVSAMN 369

Query: 289 ELIRMAQMGEPLWMTSLDGTAA----VLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVI 344
           EL++MA+M EPLW+ ++    +     LN  EY++ F   +G KPTGF  EASRE+ +V 
Sbjct: 370 ELVKMARMNEPLWIPTIPSPGSPIMETLNFKEYLKAFSPCVGVKPTGFVSEASRESGIVT 429

Query: 345 MNH-ISLVEILMDV--------------NQWSTVFSGIVSRAMTLEVLSTGVAGNYNGAL 389
           ++   +L+E+ MD                +WS +F  IV++A  +E +  GVAG+ NGAL
Sbjct: 430 IDSSAALMEVFMDEVLLVPPCSLFLLLPRRWSDIFYCIVAKASIVEEILPGVAGSRNGAL 489

Query: 390 QVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAV----RCRRRPS 445
            +M AE Q+ SPLVP RE  ++R+CKQ  EG WAVVDVS+D L+    +    +CRR PS
Sbjct: 490 LLMQAELQMLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLQTDQCLATNTKCRRLPS 549

Query: 446 GCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASV 505
           GC++Q+ PNG  KVTWVEH E  +  VH LY+ L+ +G A GA RW+ATL RQCE LA +
Sbjct: 550 GCVLQDTPNG-CKVTWVEHAEYPEASVHQLYQPLMRSGLALGAGRWLATLQRQCECLAIL 608

Query: 506 MATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTL---SGTGADDVR 562
           M++           + +G+ S+LKLA RM+ +FCAG+ AS++  W+ L   +G+   DVR
Sbjct: 609 MSSLAAPEHDSAAVSLEGKWSLLKLARRMMENFCAGMGASSSREWSMLDGFTGSTGKDVR 668

Query: 563 VMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAH 622
           VM + SVD+PG PPG+VLS AT+ WLPV P+R+F+FLRDE  R+EWDILSNGG +Q++  
Sbjct: 669 VMVQNSVDEPGVPPGVVLSVATAVWLPVTPERLFNFLRDEELRAEWDILSNGGPMQQVLR 728

Query: 623 IANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNG 682
           I+ G+  GN V+LLR +     +S  +++LILQE+CTD + + V+Y PVD  AM +VL G
Sbjct: 729 ISKGQLDGNSVALLRAD---HTDSHLNSILILQETCTDRSGAMVVYTPVDFPAMQLVLGG 785

Query: 683 GDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVAT 742
           GD   VALLPSGF ILP G++  G  +G  A  GSLLTVAFQILV+S PTAKL++ SV T
Sbjct: 786 GDSKNVALLPSGFVILPAGSTASG--LGHKAR-GSLLTVAFQILVNSQPTAKLTVESVDT 842

Query: 743 VNNLIACTVERIKASLSCE 761
           V +LI+CT+E+IKA+L C+
Sbjct: 843 VYSLISCTIEKIKAALHCD 861


>gi|110430672|gb|ABG73462.1| homeodomain transcription factor [Oryza brachyantha]
          Length = 844

 Score =  635 bits (1639), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 366/813 (45%), Positives = 494/813 (60%), Gaps = 98/813 (12%)

Query: 23  GGLGSSSGLTLSQPTNMMEGQLHPLDMT----------QNTSESEIARLREEEFDSTKSG 72
           GG  ++ GL+L   TNM  G L  ++ +                 + R RE+E DS +SG
Sbjct: 46  GGGYAAPGLSLGLQTNMDGGHLGDMNRSLAMMGNGGSGSGGDGDSLGRGREDENDS-RSG 104

Query: 73  SENHEGASGDDQE---QRP-NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELG 128
           S+N +GASGDD +     P  KKKRYHRHT  QIQE+EA FKECPHPD+KQR ELSR L 
Sbjct: 105 SDNLDGASGDDLDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLN 164

Query: 129 LEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTA 188
           LE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KLRA+NM  REA+ N  C +CGG   
Sbjct: 165 LESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMTIREAMRNPMCASCGGAAV 224

Query: 189 IGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPV--PSRPLELAVGN 246
           +GE+S +E HLR+ENARL++E+DR+ A+A K++G+P+ +    SPP       LEL VG+
Sbjct: 225 LGEVSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSISSPSPPSLQACSGLELGVGS 284

Query: 247 FGAQPG-IGGGEMYGAADLLRSISAPTEADKPMIIELAVAA------------------- 286
            G   G +G   +    DL+   +        M +   +                     
Sbjct: 285 NGFGLGALGASGLQSIPDLMGGSAGLPVGSAAMRLPAGIGGLDGAMHAAAADGGAIDRAV 344

Query: 287 --------MEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASR 338
                   M+EL+++AQM EPLW+ SLDG    LN DEY R F R +G  P  +  EA+R
Sbjct: 345 LLELALAAMDELVKVAQMDEPLWLPSLDGGFEALNYDEYHRAFARVLGQSPGSYVSEATR 404

Query: 339 ETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQV 398
           E+ + I++ + LV+ LMD  +WS +F  IV+RA T +++S+G+ G  +G++Q+M AE QV
Sbjct: 405 ESGIAIISSVDLVDSLMDAPRWSEMFPCIVARASTTDIISSGMGGTRSGSIQLMHAELQV 464

Query: 399 PSPLVPTRESYYVRYCKQHGEGTW-AVVDVSLDNLRPSP-------------AVRCRRRP 444
            SPLVP RE  ++R+CKQH EG W  V       LRP                + CR  P
Sbjct: 465 LSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAVLRPDQNGGGGGGVSSSSSYMGCRLLP 524

Query: 445 SGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLAS 504
           +GC++Q+M NGYSKVTWV H   D+  VH LY+ L+ +G A GA+RW+A+L RQC+ LA 
Sbjct: 525 TGCIVQDMNNGYSKVTWVVHAAYDETAVHQLYRPLLRSGQALGARRWLASLQRQCQYLAI 584

Query: 505 VMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVM 564
           + + ++P  +   IT +  R    +  E                     +G G D VR+M
Sbjct: 585 LCSNSLPARDHAAITPKWRRLDEWRGGEG-----------------GGGAGDGEDKVRMM 627

Query: 565 TRKSVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHI 623
            R SV  PG PPG+VLSA TS  LP   P+RVFD+LRDE  R +WDIL+NG  +QEM HI
Sbjct: 628 ARHSVGAPGEPPGVVLSATTSVRLPGTLPQRVFDYLRDEQRRGDWDILANGEAMQEMDHI 687

Query: 624 ANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGG 683
           A G+  GN VSLLR N   + + +Q+NMLILQE+CTD + S V+YAPVD+ +M+VV+NGG
Sbjct: 688 AKGQHHGNAVSLLRPN---ATSGNQNNMLILQETCTDSSGSLVVYAPVDVQSMHVVMNGG 744

Query: 684 DPDYVALLPSGFAILPDG---TSLHGANIGEAA---------------SGGSLLTVAFQI 725
           D  YV+LLPSGFAILPDG    S    ++G A+               + GSL+TVAFQI
Sbjct: 745 DSAYVSLLPSGFAILPDGHNSASPSPVDVGSASPSSTAGAGATGGGSNNTGSLVTVAFQI 804

Query: 726 LVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           LV+++PTAKL++ SV TV+NL++CT+++IK++L
Sbjct: 805 LVNNLPTAKLTVESVDTVSNLLSCTIQKIKSAL 837


>gi|225442611|ref|XP_002284502.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Vitis
           vinifera]
          Length = 754

 Score =  635 bits (1639), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 318/685 (46%), Positives = 442/685 (64%), Gaps = 51/685 (7%)

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           YHRHT  QI+EMEA FKE PHPD+KQR++LS++LGL P QVKFWFQN+RTQ+K   ERHE
Sbjct: 102 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 161

Query: 154 NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGE--MSFDEHHLRLENARLREEID 211
           N+ L++E EKLR +N   RE +  + CPNCG  T+  +  M+ +E  LR+ENARL+ E++
Sbjct: 162 NSLLKSEMEKLRDENKAMRETIKKSCCPNCGSATSSRDPTMTTEEQQLRIENARLKAEVE 221

Query: 212 RISAIAAKY---VGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ A+  KY    G P  +    +       LE   G FG +                  
Sbjct: 222 KLRAVIGKYPPGTGSPSSSCSAGNDHENRSSLEFYTGIFGLE------------------ 263

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFP---RGI 325
                  K  I+E+   AMEEL +MA  GEPLW+ S++    +LN DEY+R F     G 
Sbjct: 264 -------KSRIMEIVNQAMEELKKMATAGEPLWIRSVETGREILNYDEYMREFSVENSGN 316

Query: 326 G-PKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGN 384
           G PK +    EASRET VV ++   LV+  MDVNQW  +F   +S+A T++++  G   N
Sbjct: 317 GRPKRS---IEASRETGVVFVDLPRLVQSFMDVNQWKEMFPCTISKAATVDIICNGEGPN 373

Query: 385 YNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP---SPAVRCR 441
            NGA+Q+M AE Q+ +P+VPTRE Y+VR+CKQ     WA+VDVS+D +     +  V+CR
Sbjct: 374 RNGAVQLMFAELQMLTPMVPTREVYFVRFCKQLSADQWAIVDVSIDKVEDNIDASLVKCR 433

Query: 442 RRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCER 501
           +RPSGC+I++  NG+ KV WVEH+E     VH +Y+Q+V++G AFGAK W+ATL  QCER
Sbjct: 434 KRPSGCIIEDKSNGHCKVIWVEHLECQKSTVHTMYRQIVNSGLAFGAKHWIATLQLQCER 493

Query: 502 LASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV 561
           L   MATN+PT +   +    GRKS+LKLA+RM  SFC  + AS+ ++WT +S    DD+
Sbjct: 494 LVFFMATNVPTKDSSGVATLAGRKSILKLAQRMTWSFCRALGASSFNSWTKVSSKTGDDI 553

Query: 562 RVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMA 621
           RV +RK+++DPG P G++L A +S WLPV P  +FDFLRDE  RSEWDI+ +GG VQ +A
Sbjct: 554 RVASRKNLNDPGEPQGVILCAVSSVWLPVAPHVIFDFLRDEARRSEWDIMLSGGPVQSIA 613

Query: 622 HIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLN 681
           ++A G+D GN V+      +Q+  S  ++M ++Q++CT+   S V+YAPVDI  M  V+ 
Sbjct: 614 NLAKGQDRGNAVT------IQTMKSKDNSMWVVQDTCTNAYESMVVYAPVDIPGMQSVMT 667

Query: 682 GGDPDYVALLPSGFAILPDGTSLHGANIG-----EAASGGSLLTVAFQILVDSVPTAKLS 736
           G D   +A+LPSGF+ILPDG       I      ++  GGSLLT+AFQ+L ++ PTAKL+
Sbjct: 668 GCDSSSIAILPSGFSILPDGVESRPLVITSRPEEKSTEGGSLLTIAFQVLTNTSPTAKLT 727

Query: 737 LGSVATVNNLIACTVERIKASLSCE 761
           + SV +VN L++CT++ IK SL CE
Sbjct: 728 MESVESVNTLVSCTLQNIKTSLQCE 752


>gi|297743262|emb|CBI36129.3| unnamed protein product [Vitis vinifera]
          Length = 750

 Score =  635 bits (1638), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 318/685 (46%), Positives = 442/685 (64%), Gaps = 51/685 (7%)

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           YHRHT  QI+EMEA FKE PHPD+KQR++LS++LGL P QVKFWFQN+RTQ+K   ERHE
Sbjct: 98  YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 157

Query: 154 NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGE--MSFDEHHLRLENARLREEID 211
           N+ L++E EKLR +N   RE +  + CPNCG  T+  +  M+ +E  LR+ENARL+ E++
Sbjct: 158 NSLLKSEMEKLRDENKAMRETIKKSCCPNCGSATSSRDPTMTTEEQQLRIENARLKAEVE 217

Query: 212 RISAIAAKY---VGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ A+  KY    G P  +    +       LE   G FG +                  
Sbjct: 218 KLRAVIGKYPPGTGSPSSSCSAGNDHENRSSLEFYTGIFGLE------------------ 259

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFP---RGI 325
                  K  I+E+   AMEEL +MA  GEPLW+ S++    +LN DEY+R F     G 
Sbjct: 260 -------KSRIMEIVNQAMEELKKMATAGEPLWIRSVETGREILNYDEYMREFSVENSGN 312

Query: 326 G-PKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGN 384
           G PK +    EASRET VV ++   LV+  MDVNQW  +F   +S+A T++++  G   N
Sbjct: 313 GRPKRS---IEASRETGVVFVDLPRLVQSFMDVNQWKEMFPCTISKAATVDIICNGEGPN 369

Query: 385 YNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP---SPAVRCR 441
            NGA+Q+M AE Q+ +P+VPTRE Y+VR+CKQ     WA+VDVS+D +     +  V+CR
Sbjct: 370 RNGAVQLMFAELQMLTPMVPTREVYFVRFCKQLSADQWAIVDVSIDKVEDNIDASLVKCR 429

Query: 442 RRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCER 501
           +RPSGC+I++  NG+ KV WVEH+E     VH +Y+Q+V++G AFGAK W+ATL  QCER
Sbjct: 430 KRPSGCIIEDKSNGHCKVIWVEHLECQKSTVHTMYRQIVNSGLAFGAKHWIATLQLQCER 489

Query: 502 LASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV 561
           L   MATN+PT +   +    GRKS+LKLA+RM  SFC  + AS+ ++WT +S    DD+
Sbjct: 490 LVFFMATNVPTKDSSGVATLAGRKSILKLAQRMTWSFCRALGASSFNSWTKVSSKTGDDI 549

Query: 562 RVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMA 621
           RV +RK+++DPG P G++L A +S WLPV P  +FDFLRDE  RSEWDI+ +GG VQ +A
Sbjct: 550 RVASRKNLNDPGEPQGVILCAVSSVWLPVAPHVIFDFLRDEARRSEWDIMLSGGPVQSIA 609

Query: 622 HIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLN 681
           ++A G+D GN V+      +Q+  S  ++M ++Q++CT+   S V+YAPVDI  M  V+ 
Sbjct: 610 NLAKGQDRGNAVT------IQTMKSKDNSMWVVQDTCTNAYESMVVYAPVDIPGMQSVMT 663

Query: 682 GGDPDYVALLPSGFAILPDGTSLHGANIG-----EAASGGSLLTVAFQILVDSVPTAKLS 736
           G D   +A+LPSGF+ILPDG       I      ++  GGSLLT+AFQ+L ++ PTAKL+
Sbjct: 664 GCDSSSIAILPSGFSILPDGVESRPLVITSRPEEKSTEGGSLLTIAFQVLTNTSPTAKLT 723

Query: 737 LGSVATVNNLIACTVERIKASLSCE 761
           + SV +VN L++CT++ IK SL CE
Sbjct: 724 MESVESVNTLVSCTLQNIKTSLQCE 748


>gi|449530931|ref|XP_004172445.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Cucumis
           sativus]
          Length = 812

 Score =  635 bits (1637), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 328/741 (44%), Positives = 479/741 (64%), Gaps = 49/741 (6%)

Query: 62  REEEFDSTKSGSENHEGASGDDQ--------------------EQRPNKKKRYHRHTQHQ 101
           +EE     + G E+ E  SG +Q                     Q+  KKKRYHRHT  Q
Sbjct: 47  KEENGLMMRGGKEDMESGSGSEQLVEENQGIEMESNINNNDSITQQNQKKKRYHRHTARQ 106

Query: 102 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTEN 161
           IQEMEA FKECPHPDDKQR +LS+ELGL+P QVKFWFQN+RTQMK Q +R +N  LR EN
Sbjct: 107 IQEMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRSDNVILRAEN 166

Query: 162 EKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYV 221
           E L+ +N R + AL N  CP+CGG   +GE S DE  LRLENARLR++++++ ++  +Y 
Sbjct: 167 ETLKNENYRLQSALRNIICPSCGGQGILGEPSLDEQQLRLENARLRDQLEQVCSMTTRYT 226

Query: 222 GKPVVNYPLLSPPVPSRPLELAVGNFGAQ---PGIGGGEMYGAADLLRSISAP------- 271
           G+P+      +PP+    L+L +  +  Q     +   +M     +L   +A        
Sbjct: 227 GRPIQAMASAAPPLMQPSLDLDMNIYSRQYTEAMVPSSDMMALPSMLPPEAAHFPEGGLL 286

Query: 272 TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKP-- 329
            E +K + ++LAV+++ EL++M ++ EPLW+   +    VLN +E+ R FP  +  K   
Sbjct: 287 IEEEKTLAMDLAVSSIAELVKMCRLTEPLWVRDNESGKEVLNVEEHGRMFPWPLNLKQHL 346

Query: 330 -TGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGA 388
              F+ EA+R++AVVIMN I+LV+  +D N+W  +F  IV++A T++V+S+ V+G+ + +
Sbjct: 347 INEFRTEATRDSAVVIMNSITLVDAFLDANKWMELFPSIVAKAKTVQVISSSVSGHASSS 406

Query: 389 LQVMTAEFQVPSPLVPTRESYYVRYCKQHG-EGTWAVVDVSLDNLRPS---PAVRCRRRP 444
           LQ+M AE Q  SPLVPTRE++++R C+Q+  EG+W VVD  +D+   S      R RR+P
Sbjct: 407 LQLMYAELQTLSPLVPTREAHFLRCCQQNADEGSWTVVDFPIDSFHDSLQHSFPRYRRKP 466

Query: 445 SGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLAS 504
           SGC+IQ+MPNGYS+VTWVEH E++++ +H ++   V +G AFGA RW+A L RQCER+AS
Sbjct: 467 SGCIIQDMPNGYSRVTWVEHAEIEEKPIHQIFNHFVHSGMAFGANRWLAILQRQCERIAS 526

Query: 505 VMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVM 564
           +MA NI   ++GVI + + R++++KLA+RM+ +F   +S S   +WT LS +  D VR+ 
Sbjct: 527 LMARNI--SDLGVIPSPEARQNLMKLAQRMIRTFSVNISTSGGQSWTALSDSPEDTVRIT 584

Query: 565 TRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIA 624
           TRK V +PG+P G++LSA ++ WLP P  RVFD LRDE  RS+ ++LSNG  + E+AHIA
Sbjct: 585 TRKVV-EPGQPNGVILSAVSTTWLPYPHYRVFDLLRDERRRSQLEVLSNGNSLHEVAHIA 643

Query: 625 NGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGD 684
           NG   GNC+SLLR+N   ++NSSQ   L+LQESCTD + S V+YA +D+ ++ + ++G D
Sbjct: 644 NGSHPGNCISLLRINV--ASNSSQHVELMLQESCTDQSGSLVVYATIDVDSIQLAMSGED 701

Query: 685 PDYVALLPSGFAILP-DGTSLHGANIGEAASG------GSLLTVAFQILVDSVPTAKLSL 737
           P  + LLP GF+I+P  G+++ G        G      G LLTV  Q+L  ++P+AKL+L
Sbjct: 702 PSCIPLLPIGFSIVPIIGSTIDGHPAPPPEDGTPNPNSGCLLTVGLQVLASTIPSAKLNL 761

Query: 738 GSVATVNNLIACTVERIKASL 758
            SV  +NN +  TV +I  +L
Sbjct: 762 SSVTAINNHLCNTVHQINIAL 782


>gi|255549944|ref|XP_002516023.1| homeobox protein, putative [Ricinus communis]
 gi|223544928|gb|EEF46443.1| homeobox protein, putative [Ricinus communis]
          Length = 758

 Score =  633 bits (1632), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 318/682 (46%), Positives = 433/682 (63%), Gaps = 48/682 (7%)

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           YHRHT  QI+EMEA FKE PHPD+KQR++LS++LGL P QVKFWFQN+RTQ+K   ERHE
Sbjct: 109 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 168

Query: 154 NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSF--DEHHLRLENARLREEID 211
           N+ L+TE EKLR +N   RE ++ A CPNCG  T   + S   +E  LR+ENA+L+ E++
Sbjct: 169 NSLLKTEMEKLRDENKAMRETINKACCPNCGTATTSRDTSLTTEEQQLRIENAKLKSEVE 228

Query: 212 RISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAP 271
           ++ A   KY            PP             GA P    G        L   +  
Sbjct: 229 KLRAALGKY------------PP-------------GAAPSCSAGSEQENRSSLDFYTGI 263

Query: 272 TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF----PRGIGP 327
              +K  I E+A  AMEEL +MA  GEPLW+ S++    +LN DEY++ F    P     
Sbjct: 264 FGLEKSRITEIANQAMEELNKMATAGEPLWIRSVETDREILNYDEYIKEFNVENPSNGRS 323

Query: 328 KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNG 387
           K +    E SRET VV ++   LV+   DVN W  +F  ++S+A T++V+  G   N +G
Sbjct: 324 KKS---IEVSRETGVVFVDLPRLVQSFTDVNHWKEMFPCLISKAATVDVICNGEGPNRDG 380

Query: 388 ALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR---PSPAVRCRRRP 444
           A+Q+M AE Q+ +P+VPTRE Y+VRYCKQ     WA+VDVS+DN+     +  V+CR+RP
Sbjct: 381 AVQLMFAEVQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDNVEDNIDASLVKCRKRP 440

Query: 445 SGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLAS 504
           SGC+I++  NG+ KVTWVEH+E     VH +Y+ +V+TG AFGA+ WVATL  QCER+  
Sbjct: 441 SGCIIEDKSNGHCKVTWVEHLECQKSTVHTIYRTIVNTGLAFGARHWVATLQLQCERIVF 500

Query: 505 VMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVM 564
            MATN+PT +   +    GRKS+LKLA+RM  SFC  + AS+ HTW  ++    +D+R+ 
Sbjct: 501 FMATNVPTKDSTGVATLAGRKSILKLAQRMTWSFCRAIGASSYHTWNRVTSKTGEDIRIS 560

Query: 565 TRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIA 624
           +RK+++DP  P G++L A +S WLPV P  +FD+LRD+  R+EWDI+SNGG VQ +A++A
Sbjct: 561 SRKNLNDPAEPLGVILCAVSSVWLPVSPHVLFDYLRDDTHRNEWDIMSNGGQVQSIANLA 620

Query: 625 NGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGD 684
            G+D GN V+      +Q+  S+++NM +LQ+ CT+   S V+YAPVDI  M  V+ G D
Sbjct: 621 KGQDRGNAVT------IQTMKSNENNMWVLQDCCTNAYESIVVYAPVDINGMQSVITGCD 674

Query: 685 PDYVALLPSGFAILPDGTSLHGANIG-----EAASGGSLLTVAFQILVDSVPTAKLSLGS 739
               A+LPSGFAILPDG       I      +   GGSLLTVAFQIL ++ PTAKL++ S
Sbjct: 675 SSSTAILPSGFAILPDGLETRALVITSRREEKRTEGGSLLTVAFQILTNTSPTAKLTMES 734

Query: 740 VATVNNLIACTVERIKASLSCE 761
           V +VN LI+CT+  IK SL CE
Sbjct: 735 VESVNTLISCTLRNIKTSLQCE 756


>gi|345195202|tpg|DAA34966.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 699

 Score =  632 bits (1631), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 349/711 (49%), Positives = 471/711 (66%), Gaps = 47/711 (6%)

Query: 77  EGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKF 136
           E    D Q QR    KRYHRHT  QIQ++EA FKECPHPD+ QR  LSRELGLEP Q+KF
Sbjct: 6   EPEGSDSQRQR----KRYHRHTPRQIQQLEAMFKECPHPDENQRAALSRELGLEPRQIKF 61

Query: 137 WFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDE 196
           WFQN+RTQMK QHER +N  LR EN+K+R +N+  REAL N  CP+CGGP  + E  FDE
Sbjct: 62  WFQNRRTQMKAQHERADNCFLRAENDKIRCENITMREALKNVICPSCGGP-PVAEDFFDE 120

Query: 197 HHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPS---RPLELAV----GNFGA 249
             LR+ENARL+EE+DR+S+I +KY+G+P        PPVP+     L+L+V    G    
Sbjct: 121 QKLRMENARLKEELDRVSSITSKYLGRPFTQM----PPVPTMSVSSLDLSVGGMPGQGLG 176

Query: 250 QPGIGGGEMYGAAD-LLRSISAP-TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDG 307
            P +    + G +  L   + AP TE ++PM++++A  AM+ELIR+AQ GE +W+  + G
Sbjct: 177 GPSLDLDLLSGCSSGLPYHMPAPVTEMERPMMVDMATRAMDELIRLAQAGEQIWVQGMPG 236

Query: 308 TA-AVLNEDEYVRTFPR-GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFS 365
            A  VL+   Y   F + G   +P     E SR++ +V M+ ++LV++ MD N+W   F 
Sbjct: 237 DAREVLDVATYDSLFAKPGGAFRPPEINVEGSRDSGLVFMSAVALVDVFMDTNKWMEFFP 296

Query: 366 GIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVV 425
           GIVS+A T++VL  G+ G  + +L +M  E  + +P+VPTRE  ++RYCKQ  +G WAV 
Sbjct: 297 GIVSKAQTVDVLVNGLCGR-SESLIMMYEELHIMTPVVPTRELSFLRYCKQIEQGLWAVA 355

Query: 426 DVSLDNLR------PSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQ 478
           DVSLD  R      PS   R RR PSGCLI +M NGYSKVTWVEH+E++    ++ LY+ 
Sbjct: 356 DVSLDGQRDAHYGVPS---RSRRMPSGCLIADMSNGYSKVTWVEHLEIEHMLPINVLYRN 412

Query: 479 LVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISF 538
           LV +G AFGA RW+A L R CER AS+    +P  +V  +T  +G++SM++L++RMV SF
Sbjct: 413 LVLSGAAFGAHRWLAALQRACERFASLATLGVPHHDVAGVT-PEGKRSMMRLSQRMVSSF 471

Query: 539 CAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDF 598
           CA +S+S    WT LSGT    V V T +S D  G+P G+VLSAATS WLPVP   VF F
Sbjct: 472 CASLSSSPLQRWTLLSGTTDVSVCVSTHRSTDS-GQPNGVVLSAATSIWLPVPGDHVFAF 530

Query: 599 LRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESC 658
           +RDEN RS+WD+LS+G  VQE++ I NG + GNC+SLLR       N++Q++MLILQESC
Sbjct: 531 VRDENARSQWDVLSHGNQVQEVSRIPNGSNPGNCISLLR-----GLNANQNSMLILQESC 585

Query: 659 TDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG---------TSLHGANI 709
            D + + V+Y+P+DI A NVV++G DP  + LLPSGFAILPDG         +S      
Sbjct: 586 ADASGALVVYSPIDIPAANVVMSGEDPSGIPLLPSGFAILPDGRPGSSGAGASSSAVPLA 645

Query: 710 GEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
                 G ++TVAFQILV ++P+++L+  SVATVN+LI  TV++IKA+L+C
Sbjct: 646 AAPPPPGCVVTVAFQILVSNLPSSRLNAESVATVNSLIGTTVQQIKAALNC 696


>gi|224073973|ref|XP_002304207.1| predicted protein [Populus trichocarpa]
 gi|222841639|gb|EEE79186.1| predicted protein [Populus trichocarpa]
          Length = 759

 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 314/685 (45%), Positives = 437/685 (63%), Gaps = 49/685 (7%)

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           YHRHT  QI+EMEA FKE PHPD+KQR++LS++LGL P QVKFWFQN+RTQ+K   ERHE
Sbjct: 109 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 168

Query: 154 NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAI--GEMSFDEHHLRLENARLREEID 211
           N+ L+TE +KLR +N   RE ++ A CPNCG  T      ++ +E  LR+ENA+L+ E++
Sbjct: 169 NSLLKTEMDKLREENKTMRETINKACCPNCGTATTSRGTALTTEEQQLRIENAKLKAEVE 228

Query: 212 RISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAP 271
           ++  +  KY      +    +       L+   G FG                       
Sbjct: 229 KLRVVIGKYSPGATASCSAENDQENRSSLDFYTGIFG----------------------- 265

Query: 272 TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF-----PRGIG 326
              DK  I E+A  AMEEL +MA  GEPLW+ S++    +LN DEY + F          
Sbjct: 266 --LDKTRITEIANQAMEELKKMATAGEPLWIRSVETGREILNYDEYTKEFGSENSSNNGR 323

Query: 327 PKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
           PK +    EASRET VV ++   LV+  MDVN+W  +F  ++S+A T++V+  G   N N
Sbjct: 324 PKRS---IEASRETRVVFVDLPRLVQSFMDVNRWKEMFPCLISKAATVDVICNGEGANRN 380

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR---PSPAVRCRRR 443
           GA+Q+M AE Q+ +P+VPTRE Y+VRYCKQ     WA+VDVS+D +     +  V+CR+R
Sbjct: 381 GAVQLMFAEVQMLTPMVPTREVYFVRYCKQLNAEQWAIVDVSIDKVEDNIDASLVKCRKR 440

Query: 444 PSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLA 503
           PSGC+I++  NG+ KV WVEH+E     VH +++ +V +G AFGA+ W+ATL  QCERL 
Sbjct: 441 PSGCIIEDKSNGHCKVIWVEHLECQKSAVHTMFRTVVHSGLAFGARHWIATLQLQCERLV 500

Query: 504 SVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRV 563
             MATN+PT +   +    GRKS+LKLA+RM  SFC  + AS+ HTW+ +S    +D+R+
Sbjct: 501 FFMATNVPTKDSTGVATLAGRKSILKLAQRMTWSFCRAIGASSYHTWSKVSSKTGEDIRI 560

Query: 564 MTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHI 623
            +RK++++PG P G++L A +S WLPVPP  +FDFLRDE  R+EWDI+SNGG VQ +A++
Sbjct: 561 SSRKNLNEPGEPVGLILCAVSSVWLPVPPHILFDFLRDEARRNEWDIMSNGGPVQTIANL 620

Query: 624 ANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGG 683
             G+D GN  ++L++       S ++NM +LQ+SCT+   S VIYAPVD   M  V+NG 
Sbjct: 621 IKGQDRGNAAAILKM------KSKENNMWVLQDSCTNAYESMVIYAPVDTNGMQSVINGC 674

Query: 684 DPDYVALLPSGFAILPDGTSLHGANIG-----EAASGGSLLTVAFQILVDSVPTAKLSLG 738
           D   +A+LPSGF+ILPDG       I      ++  GGSLLT+AFQIL ++ PTAKL++ 
Sbjct: 675 DSSNLAILPSGFSILPDGHESRPLVITSRQEEKSTEGGSLLTIAFQILTNTSPTAKLTME 734

Query: 739 SVATVNNLIACTVERIKASLSCESA 763
           SV +VN LI+CT++ IK SL CE +
Sbjct: 735 SVESVNALISCTLKNIKTSLQCEDS 759


>gi|224138204|ref|XP_002326544.1| predicted protein [Populus trichocarpa]
 gi|222833866|gb|EEE72343.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  630 bits (1624), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 327/719 (45%), Positives = 469/719 (65%), Gaps = 48/719 (6%)

Query: 63  EEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQR 120
           +EE +S  SG E  E  SG+++E  ++P KKKRYHRHT  QIQEMEA FKECPHPDDKQR
Sbjct: 4   KEEVES-GSGCEQLEEKSGNEEESSEQPPKKKRYHRHTARQIQEMEAMFKECPHPDDKQR 62

Query: 121 KELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASC 180
             LS ELGL+P QVKFWFQN+RTQMK Q +R +N  LR ENE L+ DN R +  L N  C
Sbjct: 63  MRLSHELGLKPRQVKFWFQNRRTQMKAQQDRSDNNILRAENESLQNDNYRLQAELRNLIC 122

Query: 181 PNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPL 240
           P+CGG   +GE+ F++  LRLE+ARLREE++R+  IA++Y G+P+           S  L
Sbjct: 123 PDCGGQAMLGEIPFED--LRLEHARLREELERVCCIASRYGGRPI----------HSMSL 170

Query: 241 ELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPL 300
              +                A  +L       E  + + + LA+++M+EL++M    EPL
Sbjct: 171 GTCIDMMPMPMLPEPSSFPEAGIVL------MEEGEGLAMGLALSSMDELVKMCNANEPL 224

Query: 301 WMTSLDGTAAVLNEDEYVRTFP--RGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVN 358
           W+T+ +    VLN +E+ R FP    +    +  + EA+R+ AVVIMN I+LV+  +D N
Sbjct: 225 WITNNENGKEVLNLEEHARMFPWPSNLKQNSSDMRTEATRDCAVVIMNSINLVDAFLDAN 284

Query: 359 QWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQH- 417
           +W  +F  IV+RA T++V+ TGV G  +G+L +M AE QV SPLVPTRE++++R+C+Q+ 
Sbjct: 285 KWMELFPSIVARAKTVQVIKTGVCG-ASGSLHLMYAELQVLSPLVPTRETHFLRFCQQNV 343

Query: 418 GEGTWAVVDVSLD----NLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVH 473
            EGTWA+VD  LD    N+RPS  +  RRRPSGC+IQ++PNGYSK+TW+EH E++D+ VH
Sbjct: 344 EEGTWAIVDFPLDSFHDNIRPSFPLY-RRRPSGCVIQDLPNGYSKLTWIEHAEIEDKPVH 402

Query: 474 NLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAER 533
            ++ Q + +G AFGA RW+A L RQCER+AS+MA NI   ++GVI + + RK+M++LA+R
Sbjct: 403 QIFSQYIYSGMAFGAHRWLAVLQRQCERVASLMARNI--SDLGVIPSPEARKNMMRLAQR 460

Query: 534 MVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPK 593
           M+ +F   +S S+  +WT L  +    VR+++R+ + +PG+P G++LSA ++ WLP P  
Sbjct: 461 MIRTFSLNISTSSGQSWTALPDSHDGTVRIISRE-ITEPGQPNGVILSAVSTTWLPYPHF 519

Query: 594 RVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLI 653
            VFD LRDE+ RS+ ++LSNG  + E+AHIANG   GNC+SLLR+N   ++NSSQ   L+
Sbjct: 520 LVFDLLRDEHRRSQLEVLSNGNALHEVAHIANGSHPGNCISLLRINV--ASNSSQHVDLM 577

Query: 654 LQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAA 713
           LQESCTD + S V++  VD+ ++ + ++G DP  + LLP GF I+P  +S    + G + 
Sbjct: 578 LQESCTDQSGSLVVFTTVDVESIQLAMSGEDPSCIPLLPLGFVIVPVESSSSTVSEGNSM 637

Query: 714 SGGS-------------LLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
              S             LLTV  Q L  ++P+AKL+  SV  +NN +  TV +I  +LS
Sbjct: 638 QSNSEDGNGNGHNNSGCLLTVGLQALASTIPSAKLNFSSVTAINNHLCNTVNQITVALS 696


>gi|42562138|ref|NP_564041.2| homeobox-leucine zipper protein HDG12 [Arabidopsis thaliana]
 gi|75264044|sp|Q9LMT8.1|HDG12_ARATH RecName: Full=Homeobox-leucine zipper protein HDG12; AltName:
           Full=HD-ZIP protein HDG12; AltName: Full=Homeodomain
           GLABRA 2-like protein 12; AltName: Full=Homeodomain
           transcription factor HDG12; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 12
 gi|9665069|gb|AAF97271.1|AC034106_14 Strong similarity to meristem L1 layer homeobox protein (ATML1)
           from Arabidopsis thaliana gb|U37589 and contains
           Transposase PF|01527, Homeobox PF|00046, and START
           PF|01852 domains. EST gb|AI995645 comes from this gene
           [Arabidopsis thaliana]
 gi|225897942|dbj|BAH30303.1| hypothetical protein [Arabidopsis thaliana]
 gi|332191531|gb|AEE29652.1| homeobox-leucine zipper protein HDG12 [Arabidopsis thaliana]
          Length = 687

 Score =  628 bits (1620), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 332/702 (47%), Positives = 463/702 (65%), Gaps = 35/702 (4%)

Query: 73  SENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPL 132
           S+NH+ +   + E++  KKKR+HRHT HQIQ +E+ F EC HPD+KQR +LSRELGL P 
Sbjct: 7   SQNHDSS---ETEKKNKKKKRFHRHTPHQIQRLESTFNECQHPDEKQRNQLSRELGLAPR 63

Query: 133 QVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEM 192
           Q+KFWFQN+RTQ K QHER +N  L+ EN+K+R +N+  REA+ +A CP+CG      + 
Sbjct: 64  QIKFWFQNRRTQKKAQHERADNCALKEENDKIRCENIAIREAIKHAICPSCGDSPVNEDS 123

Query: 193 SFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPG 252
            FDE  LR+ENA+LR+E++R+S+IAAK++G+P+ + P L  P+   PLEL    F   P 
Sbjct: 124 YFDEQKLRIENAQLRDELERVSSIAAKFLGRPISHLPPLLNPMHVSPLEL----FHTGPS 179

Query: 253 IGGGEMYGAADLLRSISAP-------TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSL 305
           +    + G+   +   S P       +E DK ++  +AV AMEEL+R+ Q  EPLW+ + 
Sbjct: 180 LDFDLLPGSCSSMSVPSLPSQPNLVLSEMDKSLMTNIAVTAMEELLRLLQTNEPLWIKT- 238

Query: 306 DGTAAVLNEDEYVRTFPRG--IGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTV 363
           DG   VLN + Y   F R    G K      EASR + VV  N I+LV++LM+  + + +
Sbjct: 239 DGCRDVLNLENYENMFTRSSTSGGKKNNLGMEASRSSGVVFTNAITLVDMLMNSVKLTEL 298

Query: 364 FSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWA 423
           F  IV+ + TL V+S+G+ GN+  AL +M  E QV SPLV TRE   +RYC+Q   GTWA
Sbjct: 299 FPSIVASSKTLAVISSGLRGNHGDALHLMIEELQVLSPLVTTREFCVLRYCQQIEHGTWA 358

Query: 424 VVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLYKQLVST 482
           +V+VS +  +     R  R PSGCLIQ+M NGYSKVTWVEH E +++  +H ++K +V  
Sbjct: 359 IVNVSYEFPQFISQSRSYRFPSGCLIQDMSNGYSKVTWVEHGEFEEQEPIHEMFKDIVHK 418

Query: 483 GNAFGAKRWVATLDRQCERLASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVISFCAG 541
           G AFGA+RW+ATL R CER  +++     + ++ GVI + +G++S+++LA RMV +FC  
Sbjct: 419 GLAFGAERWIATLQRMCERFTNLLEPATSSLDLGGVIPSPEGKRSIMRLAHRMVSNFCLS 478

Query: 542 VSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRD 601
           V  S     T +SG     +RV + KS  +P    G+VL AATSFWLP+ P+ VF+FL+D
Sbjct: 479 VGTSNNTRSTVVSGLDEFGIRVTSHKSRHEPN---GMVLCAATSFWLPISPQNVFNFLKD 535

Query: 602 ENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTD- 660
           E TR +WD+LSNG  VQE+AHI NG + GNC+S+LR     +A+SSQ+NMLILQESC D 
Sbjct: 536 ERTRPQWDVLSNGNSVQEVAHITNGSNPGNCISVLRGF---NASSSQNNMLILQESCIDS 592

Query: 661 PTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLT 720
            +A+ VIY PVD+ A+N+ ++G D  Y+ +LPSGFAI PDG+S           GGSL+T
Sbjct: 593 SSAALVIYTPVDLPALNIAMSGQDTSYIPILPSGFAISPDGSS---------KGGGSLIT 643

Query: 721 VAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           V FQI+V  +  AKL++ S+ TVNNLI  TV +IK +L+C S
Sbjct: 644 VGFQIMVSGLQPAKLNMESMETVNNLINTTVHQIKTTLNCPS 685


>gi|414876612|tpg|DAA53743.1| TPA: outer cell layer1 [Zea mays]
          Length = 702

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 327/662 (49%), Positives = 450/662 (67%), Gaps = 48/662 (7%)

Query: 24  GLGSSSGLTL--SQPTNMMEGQLHPLDMTQNTSESEIARLREEEFDSTKSGSENHE---- 77
           G  SS  L+L    P   M G++ P+      +   +AR   +  + ++SGS++ +    
Sbjct: 27  GFSSSPALSLGLENPGGGMVGRMLPV--GGAPAAGGMARDAADAENDSRSGSDHLDAMSA 84

Query: 78  GASGDDQEQ----RPNK-KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPL 132
           GA  +D++      P K KKRYHRHT  QIQE+EA FKECPHPD+KQR ELS+ LGL+P 
Sbjct: 85  GAGAEDEDDAEPGNPRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRGELSKRLGLDPR 144

Query: 133 QVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEM 192
           QVKFWFQN+RTQMKTQ ERHEN  L+ EN+KLRA+NM  REA+ +  C +CG P  +GE+
Sbjct: 145 QVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMAIREAMRSPMCGSCGSPAMLGEV 204

Query: 193 SFDEHHLRLENARLREEIDRISAIAAKYVGK--PVVNYPLLSP----PVPSRPLELAVGN 246
           S +E HL +ENARL++E++R+ A+A K++GK  PV++ P+L P    P+PS  LELAVG 
Sbjct: 205 SLEEQHLCIENARLKDELNRVYALATKFLGKPMPVLSGPMLQPNLSLPMPSSSLELAVGG 264

Query: 247 FGAQPGIGGGEMY--GAADLLRSISAPTEA-----------DKPMIIELAVAAMEELIRM 293
                 I   + +  G +  L ++  P  A           D+ M++ELA++AM+EL+++
Sbjct: 265 LRGLGSIPSLDEFAGGVSSPLGTVITPARATGSAPPPMVGVDRSMLLELAISAMDELVKL 324

Query: 294 AQMGEPLWMTSLDGT--AAVLNEDEYVRTFPRGIGP-KPTGFKCEASRETAVVIM-NHIS 349
           AQ+ EPLW+ SL G+    +LN +EY  +F   +G  KP G+  EASRE+ +VI+ N ++
Sbjct: 325 AQVDEPLWLPSLSGSPDKKLLNFEEYAHSFSPSVGAVKPVGYVSEASRESGLVIIDNSLA 384

Query: 350 LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESY 409
           LVE LMDV +WS +FS ++++A  LE +++G+AG+ NGAL +M AE QV SPLVP RE  
Sbjct: 385 LVETLMDVRRWSDMFSCMIAKATVLEEVTSGIAGSRNGALLLMKAELQVLSPLVPIREVT 444

Query: 410 YVRYCKQHGEGTWAVVDVSLDNL---------RPSPAVRCRRRPSGCLIQEMPNGYSKVT 460
           ++R+CKQ  EG WAVVDVS+D L           +  +RCRR PSGC++Q+ PNGY KVT
Sbjct: 445 FLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGNIRCRRLPSGCVMQDTPNGYCKVT 504

Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITN 520
           WVE+ E D+  VH LY+ L+ +G AFGA+RW+A L RQCE LA +M+ +  +     +  
Sbjct: 505 WVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECLAILMSPDTVSANDSSVIT 564

Query: 521 QDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTG---ADDVRVMTRKSVDDPGRPPG 577
           Q+G++SMLKLA RM  +FCAGVSAS+A  W+ L G      +DVRVM RKSVD+PG PPG
Sbjct: 565 QEGKRSMLKLARRMTENFCAGVSASSAREWSKLDGAAGSIGEDVRVMARKSVDEPGEPPG 624

Query: 578 IVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLR 637
           +VLSAATS W+PV P+++F+FLRDE  R+EWDILSNGG +QEMA+IA G++ GN VSLLR
Sbjct: 625 VVLSAATSVWVPVAPEKLFNFLRDEQLRAEWDILSNGGPMQEMANIAKGQEHGNSVSLLR 684

Query: 638 VN 639
            +
Sbjct: 685 AS 686


>gi|22475195|gb|AAM97321.1| homeodomain protein GhHOX1 [Gossypium hirsutum]
          Length = 753

 Score =  625 bits (1612), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 318/683 (46%), Positives = 437/683 (63%), Gaps = 47/683 (6%)

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           YHRHT  QI+EMEA FKE PHPD+KQR++LS++LGL P QVKFWFQN+RTQ+K   ERHE
Sbjct: 101 YHRHTADQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 160

Query: 154 NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAI--GEMSFDEHHLRLENARLREEID 211
           N+ L+ E +KLR +N   RE ++ A C NCG  T    G ++ +E  LR+ENA+L+ E++
Sbjct: 161 NSLLKQELDKLRDENKAMRETINKACCLNCGMATTAKDGSITAEEQQLRIENAKLKAEVE 220

Query: 212 RISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAP 271
           ++  +  KY            PP  S     + GN          E   + D    I   
Sbjct: 221 KLRTVIGKY------------PPGASTTGSCSSGN--------DQENRSSLDFYTGIFG- 259

Query: 272 TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVR--TFPRGIGPKP 329
              +K  I+E+   AMEEL +MA  GEPLW+ S++    +LN DEYV+  +       +P
Sbjct: 260 --LEKSRIMEIVNQAMEELQKMATAGEPLWVRSVETGREILNYDEYVKELSVESSSNGRP 317

Query: 330 TGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGAL 389
                EASRET VV ++   LV+  MD NQW  +F  I+S+A T++V+  G A N NGA+
Sbjct: 318 KR-SIEASRETGVVFLDLPRLVQSFMDANQWKEMFPCIISKAATVDVICHGEAPNKNGAV 376

Query: 390 QVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP---SPAVRCRRRPSG 446
           Q+M AE Q+ +PLVPTRE Y+VRYCKQ     WA+VDVS+D +     +  V+CR+RPSG
Sbjct: 377 QLMFAELQMLTPLVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDASLVKCRKRPSG 436

Query: 447 CLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVM 506
           C+IQ+  NG+ KV WVEH+E     VH LY+ +V +G AFGA+ W+ATL  QCERL   M
Sbjct: 437 CIIQDTTNGHCKVIWVEHLECQKNTVHTLYRTIVRSGLAFGARHWMATLQHQCERLVFFM 496

Query: 507 ATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTR 566
           ATN+PT +   +    GRKS+LKLA+RM  SFC  + AS+ HTW  +S    +D+RV +R
Sbjct: 497 ATNVPTKDSTGVATLAGRKSILKLAQRMTWSFCHSIGASSYHTWNKVSTKTGEDIRVSSR 556

Query: 567 KSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANG 626
           K+++DPG P G+++ A +S WLPV P  +FDFLRDE+ RSEWDI+SNGG VQ +A++A G
Sbjct: 557 KNLNDPGEPHGVIVCAVSSVWLPVSPTLLFDFLRDESRRSEWDIMSNGGPVQSIANLAKG 616

Query: 627 RDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPD 686
           +D GN V+      +Q+  S +++M +LQ+SCT+   S V++A VD+  +  V+ G D  
Sbjct: 617 KDRGNAVT------IQAMKSKENSMWVLQDSCTNAFESMVVFAHVDVTGIQSVITGCDSS 670

Query: 687 YVALLPSGFAILPDG--------TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLG 738
            +A+LPSGF+ILPDG        +S H  +      GGSLLTVAFQIL +S PTAKL++ 
Sbjct: 671 NMAILPSGFSILPDGLESRPLVISSRHEKS--NDTEGGSLLTVAFQILTNSSPTAKLTME 728

Query: 739 SVATVNNLIACTVERIKASLSCE 761
           SV +VN +++CT+  IK SL CE
Sbjct: 729 SVESVNTIVSCTLRNIKTSLQCE 751


>gi|13346176|gb|AAK19610.1|AF336277_1 BNLGHi8377 [Gossypium hirsutum]
          Length = 758

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 318/683 (46%), Positives = 438/683 (64%), Gaps = 47/683 (6%)

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           YHRHT  QI+EMEA FKE PHPD+KQR++LS++LGL P QVKFWFQN+RTQ+K   ERHE
Sbjct: 106 YHRHTADQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 165

Query: 154 NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAI--GEMSFDEHHLRLENARLREEID 211
           N+ L+ E +KLR +N   RE ++ A C NCG  T    G ++ +E  LR+ENA+L+ E++
Sbjct: 166 NSLLKQELDKLRDENKAMRETINKACCLNCGMATTAKDGFITAEEQQLRIENAKLKAEVE 225

Query: 212 RISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAP 271
           ++  +  KY            PP  S     + GN          E   + +    I A 
Sbjct: 226 KLRTVIGKY------------PPGASTTGSCSSGN--------DQENRSSLNFYTGIFA- 264

Query: 272 TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVR--TFPRGIGPKP 329
              +K  I+E+   AMEEL +MA  GEPLW+ S++    +LN DEYV+  +       +P
Sbjct: 265 --LEKSRIMEIVNQAMEELQKMATAGEPLWVRSVETGREILNYDEYVKELSVESSSNGRP 322

Query: 330 TGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGAL 389
                EASRET VV ++   LV+  MD NQW  +F  I+S+A T++V+  G A N NGA+
Sbjct: 323 KR-SIEASRETGVVFLDLPRLVQSFMDANQWKEMFPCIISKAATVDVICHGEAPNKNGAV 381

Query: 390 QVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP---SPAVRCRRRPSG 446
           Q+M AE Q+ +PLVPTRE Y+VRYCKQ     WA+VDVS+D +     +  V+CR+RPSG
Sbjct: 382 QLMFAELQMLTPLVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDASLVKCRKRPSG 441

Query: 447 CLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVM 506
           C+IQ+  NG+ KV WVEH+E     VH LY+ +V +G AFGA+ W+ATL  QCERL   M
Sbjct: 442 CIIQDKTNGHCKVIWVEHLECQKNTVHTLYRTIVRSGLAFGARHWMATLQHQCERLVFFM 501

Query: 507 ATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTR 566
           ATN+PT +   +    GRKS+LKLA+RM  SFC  + AS+ HTW  +S    +D+RV +R
Sbjct: 502 ATNVPTKDSTGVATLAGRKSILKLAQRMTWSFCHSIGASSYHTWNKVSTKTGEDIRVSSR 561

Query: 567 KSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANG 626
           K+++DPG P G+++ A +S WLPV P  +FDFLRDE+ RSEWDI+SNGG VQ +A++A G
Sbjct: 562 KNLNDPGEPHGVIVCAVSSVWLPVSPTLLFDFLRDESRRSEWDIMSNGGPVQSIANLAKG 621

Query: 627 RDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPD 686
           +D GN V+      +Q+  S +++M +LQ+SCT+   S V++A VD+  +  V+ G D  
Sbjct: 622 KDQGNAVT------IQAMKSKENSMWVLQDSCTNAFESMVVFAHVDVTGIQSVITGCDSS 675

Query: 687 YVALLPSGFAILPDG--------TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLG 738
            +A+LPSGF+ILPDG        +S H  +      GGSLLTVAFQIL +S PTAKL++ 
Sbjct: 676 NMAILPSGFSILPDGLESRPLVISSRHEKS--NDTEGGSLLTVAFQILTNSSPTAKLTME 733

Query: 739 SVATVNNLIACTVERIKASLSCE 761
           SV +VN +++CT+  IK SL CE
Sbjct: 734 SVESVNTIVSCTLRNIKTSLQCE 756


>gi|164708731|gb|ABY67263.1| homeodomain protein HOX2 [Gossypium arboreum]
          Length = 737

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 321/697 (46%), Positives = 456/697 (65%), Gaps = 39/697 (5%)

Query: 62  REEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQ 119
           +EE     +   E   G+  + QE  ++P KKKRYHRHT HQIQE+EA FKECPHPDDKQ
Sbjct: 57  KEENGSLLRGKEEMKSGSESELQETTEQPLKKKRYHRHTAHQIQELEAVFKECPHPDDKQ 116

Query: 120 RKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNAS 179
           R +LS+ELGL+P QVKFWFQN+RTQMK Q +R EN  LR EN+ L+++  R +  LS   
Sbjct: 117 RMKLSQELGLKPRQVKFWFQNRRTQMKAQQDRSENVILRAENDSLKSEFYRLQAELSKLV 176

Query: 180 CPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRP 239
           CPNCGGP   G +SFDE  LR+ENARL EE++R+ AIA++Y+G+P+     L PP     
Sbjct: 177 CPNCGGPPVPGGVSFDE--LRIENARLGEELERVCAIASRYIGRPIQTMGALMPP----S 230

Query: 240 LELAVGNFGAQ-------PGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIR 292
           LEL +  +  Q       P +     Y   + L  +    E +K + +ELA++A +EL++
Sbjct: 231 LELDMNIYPRQFLEPMPPPILSETPSYPDNNNLILM----EEEKTIAMELAMSATDELVK 286

Query: 293 MAQMGEPLWMTSLDGTAAVLNEDEYVRTF--PRGIGPKPTGFKCEASRETAVVIMNHISL 350
           M +  EPLW+ + +    VLN DE++R F  P  +  + + F+ EASR+++VVIMN I+L
Sbjct: 287 MCRTNEPLWVRNDETGKEVLNLDEHIRMFHWPLNLKQRSSEFRTEASRDSSVVIMNSITL 346

Query: 351 VEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYY 410
           V+  +D N+W  +F  +V+RA  ++VLS GV+G  NG LQ+M AE  V SPLVPTRE+Y+
Sbjct: 347 VDAFVDANKWMELFPSLVARAKCVQVLSQGVSGT-NGCLQLMYAELHVLSPLVPTREAYF 405

Query: 411 VRYCKQHG---EGTWAVVDVSLDNLRPSPAVRC---RRRPSGCLIQEMPNGYSKVTWVEH 464
           +RYC+Q     E  WA+VD  LD    S        +RRPSGCLIQ+MPNGYS+VTWVEH
Sbjct: 406 LRYCQQQNVEDETYWAIVDFPLDGFHNSLQTSFPLYKRRPSGCLIQDMPNGYSRVTWVEH 465

Query: 465 VEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGR 524
            E++++ +H ++   V +G AFGA  W+A L+RQCER+AS+MATNIP  ++GVI + D R
Sbjct: 466 SEIEEKPIHQIFSHFVHSGMAFGANCWLAVLERQCERIASLMATNIP--DIGVIPSPDAR 523

Query: 525 KSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAAT 584
           K++++L++RM+ +FC  +S+ +   WT +  +  D V + TRK V + G+P G++L A +
Sbjct: 524 KNIMRLSQRMIRTFCVNISSCSGQVWTAVPDSSDDTVIITTRK-VSEAGQPNGLILCAVS 582

Query: 585 SFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSA 644
           + WLP P   VFD LRDE  R++ ++LSN   + E+AHI NG   GNC+SLLR+N   ++
Sbjct: 583 TTWLPYPHHHVFDLLRDERRRAQLEVLSNWNALHEVAHIVNGSHPGNCISLLRINV--AS 640

Query: 645 NSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP----- 699
           NSSQ   L+LQESC D + S V+Y+ VD+ ++ + ++G DP  + LLP GF I P     
Sbjct: 641 NSSQHVDLMLQESCADKSGSLVVYSTVDVDSVQLAMSGEDPSCIPLLPLGFFITPMELLN 700

Query: 700 DGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLS 736
           DG     AN     + GSLLTV  Q+L  ++P+AK++
Sbjct: 701 DGGCKDEAN-EHNITTGSLLTVGLQVLASTIPSAKIN 736


>gi|413944021|gb|AFW76670.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 732

 Score =  623 bits (1606), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 351/745 (47%), Positives = 475/745 (63%), Gaps = 82/745 (11%)

Query: 77  EGASGDDQEQRPNKKKRYHRHTQHQIQEMEAF---------------------------- 108
           E    D Q QR    KRYHRHT  QIQ++EA+                            
Sbjct: 6   EPEGSDSQRQR----KRYHRHTPRQIQQLEAYDLASFPFLLLLLYSVRPPLWLFVVRRDG 61

Query: 109 -----------------FKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
                            FKECPHPD+ QR  LSRELGLEP Q+KFWFQN+RTQMK QHER
Sbjct: 62  LAERNVMACVLAHDCRMFKECPHPDENQRAALSRELGLEPRQIKFWFQNRRTQMKAQHER 121

Query: 152 HENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEID 211
            +N  LR EN+K+R +N+  REAL N  CP+CGGP  + E  FDE  LR+ENARL+EE+D
Sbjct: 122 ADNCFLRAENDKIRCENITMREALKNVICPSCGGP-PVDEDFFDEQKLRMENARLKEELD 180

Query: 212 RISAIAAKYVGKPVVNYPLLSPPVPS---RPLELAVGNFGAQ--PGIGGGEMYGAAD-LL 265
           R+S+I +KY+G+P        PPVP+     L+L+VG  G+   P +    + G +  L 
Sbjct: 181 RVSSITSKYLGRPFTQM----PPVPTMSVSSLDLSVGGMGSLGGPSLDLDLLSGCSSGLP 236

Query: 266 RSISAP-TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTA-AVLNEDEYVRTFPR 323
             + AP TE ++PM++++A  AM+ELIR+AQ GE +W+  + G A  VL+   Y   F +
Sbjct: 237 YQVPAPVTEMERPMMVDMAARAMDELIRLAQAGEQIWVKGVPGDAREVLDVGTYDSLFAK 296

Query: 324 -GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVA 382
            G   +P     EASR++ +V M+ ++LV++ MD N+W   F GIVS+A T++VL  G+ 
Sbjct: 297 PGAAFRPPDINVEASRDSGLVFMSAVALVDVFMDTNKWMEFFPGIVSKAQTVDVLVNGLG 356

Query: 383 GNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR------PSP 436
           G  + +L +M  E  + +P+VPTRE  ++RYCKQ  +G WAV DVSL+  R      PS 
Sbjct: 357 GR-SESLIMMYEELHIMTPVVPTRELSFLRYCKQIEQGLWAVADVSLEGQRDAHYGVPS- 414

Query: 437 AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQLVSTGNAFGAKRWVATL 495
             R RR PSGCLI +M NGYSKVTWVEH+E++    ++ LY+ LV +G AFGA RW+A L
Sbjct: 415 --RSRRMPSGCLIADMSNGYSKVTWVEHMEIEQMLPINVLYRNLVLSGAAFGAHRWLAAL 472

Query: 496 DRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSG 555
            R CER ASV    +P  +V  +T  +G++SM KL++RMV SFCA +S+S    WT LSG
Sbjct: 473 QRACERFASVATLGVPHHDVAGVT-PEGKRSMTKLSQRMVSSFCASLSSSPLQRWTLLSG 531

Query: 556 TGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGG 615
           T    VRV T +S D  G+P G+VLSAATS WLPVP   VF F+RDEN RS+WD+LS+G 
Sbjct: 532 TTDVSVRVSTHRSTDS-GQPNGVVLSAATSIWLPVPGDHVFAFVRDENARSQWDVLSHGN 590

Query: 616 VVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVA 675
            VQE++ I NG + GNC+SLLR       N++Q++MLILQESCTD + + V+Y+P+DI A
Sbjct: 591 QVQEVSRIPNGSNPGNCISLLR-----GLNANQNSMLILQESCTDASGALVVYSPIDIPA 645

Query: 676 MNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKL 735
            NVV++G DP  + LLPSGFAILP  +    ++       G ++TVAFQILV ++P+++L
Sbjct: 646 ANVVMSGEDPSGIPLLPSGFAILPG-SGAGASSSAVVPPPGCVVTVAFQILVSNLPSSRL 704

Query: 736 SLGSVATVNNLIACTVERIKASLSC 760
           +  SVATVN+LI  TV++IKA+L+C
Sbjct: 705 NAESVATVNSLIGTTVQQIKAALNC 729


>gi|356550528|ref|XP_003543638.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 762

 Score =  621 bits (1601), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 319/713 (44%), Positives = 454/713 (63%), Gaps = 45/713 (6%)

Query: 63  EEEFDSTKSGSENHEGASGDDQEQRPNKKKR-YHRHTQHQIQEMEAFFKECPHPDDKQRK 121
           E++F+  ++  E+ + A GD++ ++  KK++ YHRHT  QI+EMEA FKE PHPD+KQR+
Sbjct: 79  EDDFEGGEAEPEDDDDAHGDNKNKKTKKKRKKYHRHTADQIREMEALFKESPHPDEKQRQ 138

Query: 122 ELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCP 181
           +LS++LGL P QVKFWFQN+RTQ+K   ERHEN+ L++E EKL+  N   RE ++ A CP
Sbjct: 139 QLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKSEIEKLKEKNKSLRETINKACCP 198

Query: 182 NCGGPTAI--GEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRP 239
           NCG PT    G M  +E  LR+ENA+L+ E++++ A   KY           SP   S  
Sbjct: 199 NCGVPTTSRDGVMPTEEQQLRIENAKLKAEVEKLRAALGKYAPGST------SPSCSSGH 252

Query: 240 LELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEP 299
            +    +     GI G                   DK  I+++   AMEELI+MA +GEP
Sbjct: 253 DQENRSSLDFYTGIFG------------------LDKSRIMDIVNQAMEELIKMATVGEP 294

Query: 300 LWMTSLDGTAAVLNEDEYVRTFP---RGIGPKPTGFKCEASRETAVVIMNHISLVEILMD 356
           LW+ S +    +LN DEYV+ F         KP     EASR+TAVV ++  SLV+  +D
Sbjct: 295 LWLRSFETGREILNYDEYVKEFAVENSSSSGKPKR-SIEASRDTAVVFVDLPSLVQSFLD 353

Query: 357 VNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQ 416
           VNQW  +F  ++S+A T++V+  G   + NGA+Q+M AE Q+ +P+VPTRE Y+VR+CKQ
Sbjct: 354 VNQWKEMFPCLISKAATVDVICNGEGLSRNGAVQLMFAELQMLTPMVPTREVYFVRFCKQ 413

Query: 417 HGEGTWAVVDVSLDNLRP---SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVH 473
                WA+VDVS+D +     +  V+CR+RPSGC+I++  NG+ KV WVEH E     VH
Sbjct: 414 LSAEQWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHSECQKSAVH 473

Query: 474 NLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAER 533
           ++Y+ +V++G AFGA+ W+ATL  QCERL   MATN+P  +   +    GRKS+LKLA+R
Sbjct: 474 SMYRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQR 533

Query: 534 MVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPK 593
           M  SFC  + AS+ H WT ++    +D+R+ +RK+++DPG P G++L A  S WLPV P 
Sbjct: 534 MTWSFCHAIGASSIHAWTKVTSKTGEDIRISSRKNLNDPGEPLGLILCAVCSVWLPVSPN 593

Query: 594 RVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLI 653
            +FDFLRDEN R+EWDI+S+GG VQ +A++A G+D GN V+      +Q+    ++++ I
Sbjct: 594 VLFDFLRDENRRTEWDIMSSGGTVQSIANLAKGQDRGNAVA------IQTIKLKENSVWI 647

Query: 654 LQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIG--- 710
           LQ+SCT+   S V YA VDI  +  V+ G D   +A+LPSGF+I+PDG       I    
Sbjct: 648 LQDSCTNLYESMVAYACVDITGIQSVMTGCDSSNLAILPSGFSIIPDGLESRPLVISSRQ 707

Query: 711 --EAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
             +   GGSL T+AFQIL ++ PTAKL+L SV +VN L++CT+  I+ SL CE
Sbjct: 708 EEKNTEGGSLFTMAFQILTNASPTAKLTLESVDSVNTLVSCTLRNIRTSLQCE 760


>gi|356556218|ref|XP_003546423.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 747

 Score =  620 bits (1600), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 319/712 (44%), Positives = 446/712 (62%), Gaps = 50/712 (7%)

Query: 69  TKSGSEN-------HEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK 121
           T+S SE+       HE    D  + +  K+K+YHRHT  QI+EMEA FKE PHPD+KQR+
Sbjct: 65  TRSRSEDDFEVEAEHEDDDADGDKNKNKKRKKYHRHTADQIKEMEALFKESPHPDEKQRQ 124

Query: 122 ELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCP 181
           +LS++LGL P QVKFWFQN+RTQ+K   ERHEN+ L++E EKL+  N   RE ++ A CP
Sbjct: 125 QLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKSEIEKLKEKNKTLRETINKACCP 184

Query: 182 NCGGPTAI--GEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRP 239
           NCG PT    G M  +E  LR+ENA+L+ E++++ A+  KY           SP   S  
Sbjct: 185 NCGVPTTSRDGAMPTEEQQLRIENAKLKAEVEKLRAVLGKYAPGST------SPSCSSGH 238

Query: 240 LELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEP 299
            +    +     GI G                   DK  I++    AMEELI+MA +GEP
Sbjct: 239 DQENRSSLDFYTGIFG------------------LDKSRIMDTVNQAMEELIKMATVGEP 280

Query: 300 LWMTSLDGTAAVLNEDEYVRTFP--RGIGPKPTGFKCEASRETAVVIMNHISLVEILMDV 357
           LW+ S +    +LN DEYVR F        KP     EASR+TAVV ++   LV+  +DV
Sbjct: 281 LWLRSFETGREILNYDEYVREFAVENSSSGKPRR-SIEASRDTAVVFVDLPRLVQSFLDV 339

Query: 358 NQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQH 417
           NQW  +F  ++S+A T++V+  G     NGA+Q+M AE Q+ +P+VPTRE Y+VR+CKQ 
Sbjct: 340 NQWKEMFPCLISKAATVDVICNGEGPGRNGAVQLMFAELQMLTPMVPTREVYFVRFCKQL 399

Query: 418 GEGTWAVVDVSLDNLRP---SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHN 474
               WA+VDVS+D +     +  V+CR+RPSGC+I++  NG+ KV WVEH+E     VH+
Sbjct: 400 SAEQWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSAVHS 459

Query: 475 LYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERM 534
           +Y+ +V++G AFGA+ W+ATL  QCERL   MATN+P  +   +    GRKS+LKLA+RM
Sbjct: 460 MYRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRM 519

Query: 535 VISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKR 594
             SFC  + AS+ HTWT  +    +D+R+ +RK+++DPG P G++L A  S WLPV P  
Sbjct: 520 TWSFCHAIGASSFHTWTKFTSKTGEDIRISSRKNLNDPGEPLGLILCAVCSVWLPVSPNV 579

Query: 595 VFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLIL 654
           +FDFLRDE  R+EWDI+S+GG VQ +A++A G+D GN V+      +Q+  S ++++ IL
Sbjct: 580 LFDFLRDETRRTEWDIMSSGGTVQSIANLAKGQDRGNAVA------IQTIKSKENSVWIL 633

Query: 655 QESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIG---- 710
           Q+S T+P  S V+YA VDI     V+ G D   +A+LPSGF+I+PDG       I     
Sbjct: 634 QDSYTNPYESMVVYASVDITGTQSVMTGCDSSNLAILPSGFSIIPDGLESRPLVISSRQE 693

Query: 711 -EAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
            +   GGSL T+AFQIL ++ P AKL++ SV +VN L++CT+  I+ SL CE
Sbjct: 694 EKNTEGGSLFTMAFQILTNASPAAKLTMESVDSVNTLVSCTLRNIRTSLQCE 745


>gi|357454911|ref|XP_003597736.1| Homeobox-leucine zipper protein GLABRA [Medicago truncatula]
 gi|355486784|gb|AES67987.1| Homeobox-leucine zipper protein GLABRA [Medicago truncatula]
          Length = 794

 Score =  620 bits (1600), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 307/683 (44%), Positives = 436/683 (63%), Gaps = 48/683 (7%)

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           YHRHT  QI+ MEA FKE PHPD+KQR++LS++LGL P QVKFWFQN+RTQ+K   ERHE
Sbjct: 143 YHRHTSEQIRVMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 202

Query: 154 NTQLRTENEKLRADNMRYREALSNASCPNCGGPTA--IGEMSFDEHHLRLENARLREEID 211
           N+ L++E EKLR  N   RE ++ A CPNCG PT    G M+ +E  LR+ENA+L+ E++
Sbjct: 203 NSLLKSEIEKLREKNKTLRETINKACCPNCGVPTTNRDGTMATEEQQLRIENAKLKAEVE 262

Query: 212 RISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGG-EMYGAADLLRSISA 270
           R+ A   KY          +SP   +            Q  I    + Y     L     
Sbjct: 263 RLRAALGKYASGT------MSPSCSTS---------HDQENIKSSLDFYTGIFCL----- 302

Query: 271 PTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIG---- 326
               D+  I+++   AMEELI+MA MGEP+W+ SL+    +LN DEY++ F         
Sbjct: 303 ----DESRIMDVVNQAMEELIKMATMGEPMWLRSLETGREILNYDEYMKEFADENSDHGR 358

Query: 327 PKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
           PK +    EASR+T VV  +   +V+  +D NQW  +F  ++S+A T++ +  G   N N
Sbjct: 359 PKRS---IEASRDTGVVFADLPRIVQCFLDANQWKEMFPCLISKAATVDTICKGEGSNKN 415

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPS---PAVRCRRR 443
           GA+Q+M AE Q+ +P+VPTRE Y+VRYCK+     WA+VDVS+D +  +     V+CR+R
Sbjct: 416 GAVQLMFAELQMLTPMVPTREVYFVRYCKRLSGEKWAIVDVSIDKVEDNIDKSLVKCRKR 475

Query: 444 PSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLA 503
           PSGC+I++  NG+ KV WVEH+E     VH++Y+ +V++G AFGA+ W+ATL  QCERL 
Sbjct: 476 PSGCIIEDKSNGHCKVVWVEHLECQKSIVHSMYRTIVNSGLAFGARHWIATLQLQCERLV 535

Query: 504 SVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRV 563
             MATN+P  +   +    GRKS+LKLA+RM  SFC  +SAS+ HTWT ++    +D+R+
Sbjct: 536 FFMATNVPMKDSTGVATLAGRKSILKLAQRMTWSFCQAISASSFHTWTKVTSKTGEDIRI 595

Query: 564 MTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHI 623
            +RK+++DP  P G+++ A +S WLP+ P  +FDFLRDE  R+EWDI+SNGG VQ +A++
Sbjct: 596 SSRKNLNDPSEPLGLIVCAVSSIWLPISPNVLFDFLRDETRRTEWDIMSNGGTVQSIANL 655

Query: 624 ANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGG 683
           A G+D GN V+      +Q+  S ++NM ILQ+SCT+   S V+YAP DI  +  V+ G 
Sbjct: 656 AKGQDRGNAVT------IQTIKSKENNMWILQDSCTNSYESMVVYAPADITGIQSVMTGC 709

Query: 684 DPDYVALLPSGFAILPDGTSLHGANIG-----EAASGGSLLTVAFQILVDSVPTAKLSLG 738
           D   +A+LPSGF+I+ DG       I      +   GGSL T+AFQIL ++ PTAKL++ 
Sbjct: 710 DSSNLAILPSGFSIVSDGLESRQMVITSRREEKNTEGGSLFTIAFQILTNASPTAKLTME 769

Query: 739 SVATVNNLIACTVERIKASLSCE 761
           SV ++N+L++CT+  IK SL+CE
Sbjct: 770 SVDSMNSLVSCTLRHIKTSLNCE 792


>gi|163860158|gb|ABY41242.1| homeodomain protein HOX1 [Gossypium arboreum]
          Length = 753

 Score =  620 bits (1598), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 321/685 (46%), Positives = 435/685 (63%), Gaps = 51/685 (7%)

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           YHRHT  QI+EMEA FKE PHPD+KQR++LS++LGL P QVKFWFQN+RTQ+K   ERHE
Sbjct: 101 YHRHTADQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 160

Query: 154 NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAI--GEMSFDEHHLRLENARLREEID 211
           N+ L+ E EKLR +N   RE ++ A C NCG  T    G ++ +E  LR+ENA+L+ E++
Sbjct: 161 NSLLKQELEKLRDENKAMRETINKACCLNCGMATTAKDGSITAEEQQLRIENAKLKAEVE 220

Query: 212 RISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAP 271
           ++  +  KY            PP  S     + GN          E   + D    I   
Sbjct: 221 KLRTVIGKY------------PPGASTTGSCSSGN--------DQENRSSLDFYTGIFG- 259

Query: 272 TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIG----P 327
              +K  I+E+   AMEEL +MA  GEPLW+ S++    +LN DEYV+ F         P
Sbjct: 260 --LEKSRIMEIVNQAMEELQKMATAGEPLWVRSVETGREILNYDEYVKEFSVESSSNGRP 317

Query: 328 KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNG 387
           K +    EASRET VV ++   LV+  MD NQW  +F  I+S+A T++V+  G A N NG
Sbjct: 318 KRS---IEASRETGVVFLDLPRLVQSFMDANQWKEMFPCIISKAATVDVICHGEAPNKNG 374

Query: 388 ALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP---SPAVRCRRRP 444
           A+Q+M AE Q+ +PLVPTRE Y+VRYCKQ     WA+VDVS+D +     +  V+CR+RP
Sbjct: 375 AVQLMFAELQMLTPLVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDASLVKCRKRP 434

Query: 445 SGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLAS 504
           SGC+IQ+  NG+ KV WVEH E     VH LY+ +V +G AFGA+ W+ATL  QCE L  
Sbjct: 435 SGCIIQDTTNGHCKVIWVEHXECQKNTVHTLYRTIVRSGLAFGARHWMATLQHQCEGLFF 494

Query: 505 VMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVM 564
            MATN+PT +   +    GRKS+LKLA+RM  SFC  + AS+ HTW  +S    +DVRV 
Sbjct: 495 FMATNVPTKDSTGVATLAGRKSILKLAQRMTWSFCHSIGASSYHTWNKVSTKTGEDVRVS 554

Query: 565 TRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIA 624
           +RK+++DPG P G+++ A +S  LPV P  +FDFLRDE+ RSEWDI+SNGG VQ +A++A
Sbjct: 555 SRKNLNDPGEPHGVIVCAVSSVCLPVSPTLLFDFLRDESRRSEWDIMSNGGPVQSIANLA 614

Query: 625 NGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGD 684
            G+D GN V+      +Q+  S +++M ILQ+SCT+   S V++A VD+  +  V+ G D
Sbjct: 615 KGKDRGNAVT------IQAMKSKENSMWILQDSCTNAFESMVVFAHVDVTGIQSVITGCD 668

Query: 685 PDYVALLPSGFAILPDG--------TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLS 736
              +A+LPSGF+ILPDG        +S H  +      GGSLLTVAFQIL +S PTAKL+
Sbjct: 669 SSNMAILPSGFSILPDGLESRPLVISSRHEKS--NDTEGGSLLTVAFQILTNSSPTAKLT 726

Query: 737 LGSVATVNNLIACTVERIKASLSCE 761
           + SV +VN +++CT+  IK SL CE
Sbjct: 727 MESVESVNTIVSCTLRNIKTSLQCE 751


>gi|242034971|ref|XP_002464880.1| hypothetical protein SORBIDRAFT_01g028160 [Sorghum bicolor]
 gi|241918734|gb|EER91878.1| hypothetical protein SORBIDRAFT_01g028160 [Sorghum bicolor]
          Length = 827

 Score =  618 bits (1593), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 332/736 (45%), Positives = 469/736 (63%), Gaps = 69/736 (9%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           KKKRYHRHT HQIQ+MEA FKECPHPDDKQR +LS+ELGL+P QVKFWFQN+RTQMK Q 
Sbjct: 85  KKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQ 144

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREE 209
           +R +N  LR ENE L++DN R + A+ N  CPNCG    +GEMS++E  LR+ENARL++E
Sbjct: 145 DRADNVLLRAENESLKSDNYRLQAAIRNVVCPNCGHAAVLGEMSYEEQQLRIENARLKDE 204

Query: 210 IDRISAIAAKYVG--KPVVNYPL--LS--PPVPSRPLELAVGNFGAQPGIGGGEMYGAAD 263
           +DR++ IA +Y G  +P ++  L  LS  PPV   PL+L + N  A+       + G  D
Sbjct: 205 LDRLACIATRYGGGRQPSMSSALGCLSAPPPVLMPPLDLDM-NVYARHFTDQSSVMGCGD 263

Query: 264 LLRSISAP-------------------------TEADKPMIIELAVAAMEELIRMAQMGE 298
           L++S+ AP                          E D+ ++++LA  A + L +M + GE
Sbjct: 264 LIQSVLAPQQQIPVGGAEHHATSSFMGAAIGPVQEQDRQLVLDLAATAADTLAKMCRAGE 323

Query: 299 PLWMTSLDGTAAVLNEDEYVRTFP-------RGIGPKPTGFKCEASRETAVVIMNHISLV 351
           PLW+     ++ V+  DE+ R F        +G        + E SR++AVVIMN I+LV
Sbjct: 324 PLWLRRRGASSEVMVADEHARMFSWPVDGGQQGSASTGAAARTEGSRDSAVVIMNSITLV 383

Query: 352 EILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY--NGALQVMTAEFQVPSPLVPTRESY 409
           +  +D N+W  +F  IVS+A T++V++ G    +  +G+L +M AE Q PSPLVP RE  
Sbjct: 384 DAFLDANKWMELFPSIVSKARTIQVINHGARSGHMGSGSLLLMQAEVQFPSPLVPAREVV 443

Query: 410 YVRYCKQHG-EGTWAVVD-----VSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVE 463
           + RYC  +G EGTW+VVD       L+ L+ S  V+C RRPSGC+IQ+MPNGYS V WVE
Sbjct: 444 FFRYCMHNGDEGTWSVVDFPADGFQLEGLQTSSVVKCCRRPSGCIIQDMPNGYSSVVWVE 503

Query: 464 HVEV--DDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQ 521
           H+E+  +++ +H ++K  V++G AFGA RWV+ L RQCERLAS +A NI   ++GVI   
Sbjct: 504 HMEMVGEEKPLHQVFKDYVASGYAFGATRWVSLLQRQCERLASELARNI--ADLGVIRTP 561

Query: 522 DGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLS 581
           + R +M+KL++RM+ +F A +SAS + +WT LS T  D +RV TRK+  DPG+P G++L+
Sbjct: 562 EARTNMMKLSQRMITTFSANISASGSQSWTALSETTEDTIRVTTRKNT-DPGQPSGVILT 620

Query: 582 AATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCL 641
           A ++ WLP   ++VF+ L DE  R + +ILSNGG + E+AHIANG    NC+SLLR+N  
Sbjct: 621 AVSTSWLPFSHQQVFELLADEQQRCQLEILSNGGSLHEVAHIANGSHPRNCISLLRINA- 679

Query: 642 QSANSSQSNMLILQESCTDPT-ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL-- 698
            ++NSSQ+  L+LQE+ T P   S V++A VD+ A+ V ++G DP Y+ LLP GFAI   
Sbjct: 680 -ASNSSQNVELMLQETSTHPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLGFAIFPA 738

Query: 699 ----PDGTSLHGANIGEAASG-------GSLLTVAFQILVDSVPTAKLSLGSVATVNNLI 747
               P  TS    N GE++ G       G LLTV  Q+L  +VP+AKL+L S+  +N+ +
Sbjct: 739 TNPSPAATSTSSGN-GESSPGNTDEPTSGCLLTVGMQVLASAVPSAKLNLSSITAINSHV 797

Query: 748 ACTVERIKASLSCESA 763
              + +I  +L  + A
Sbjct: 798 CNAIHQITTALKGQGA 813


>gi|356528926|ref|XP_003533048.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 748

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 309/680 (45%), Positives = 431/680 (63%), Gaps = 41/680 (6%)

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           YHRHT  QI+EMEA FKE PHPD+KQR++LS++LGL P QVKFWFQN+RTQ+K   ERHE
Sbjct: 96  YHRHTTEQIREMEALFKESPHPDEKQRQKLSQQLGLAPRQVKFWFQNRRTQIKALQERHE 155

Query: 154 NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAI--GEMSFDEHHLRLENARLREEID 211
           N+ L+TE +KLR +    RE ++ + CPNCG  TA     MS +E  L +ENA+L+ E++
Sbjct: 156 NSLLKTELDKLREETKAMRETINKSCCPNCGMVTATIDASMSTEEKQLLIENAKLKAEVE 215

Query: 212 RISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAP 271
           ++     K+        P  + P  S                 G +     + L   S  
Sbjct: 216 KLRTALGKF-------SPRTTSPTTSS---------------AGHDEEENRNSLGFYSVL 253

Query: 272 TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFP--RGIGPKP 329
              DK  I+++A  A EELI+MA MGEPLW+ S++    +LN DEYV+          +P
Sbjct: 254 FGLDKSRIMDVANRATEELIKMATMGEPLWVRSVETGREILNYDEYVKEMAAENSGSERP 313

Query: 330 TGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGAL 389
             F  EASRET VV M+   L++  +DVNQW  +F  ++S+A+T++V+S G   N NGA+
Sbjct: 314 KTF-IEASRETEVVFMDLPRLLQSFLDVNQWKEMFPCLISKAVTVDVISNGEGSNRNGAV 372

Query: 390 QVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR---PSPAVRCRRRPSG 446
           Q+M AE Q+ +P+VPTRE Y+VR CKQ  +  WA+VDVS+D +     +  V+CR+RPSG
Sbjct: 373 QLMFAELQMLTPMVPTREVYFVRCCKQLSDEQWAIVDVSIDKVEDNIDASLVKCRKRPSG 432

Query: 447 CLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVM 506
           C+I++  NG+ KV WVEH+E     +H +Y+ +V++G AFGA+ W+ATL   CERL   M
Sbjct: 433 CIIEDKSNGHCKVIWVEHLECQKSTIHTMYRTIVNSGLAFGARHWIATLQLHCERLVFYM 492

Query: 507 ATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTR 566
           ATN+P  +   +    GRKS+LKLA+RM  SFC  + AS+ HTWT ++    +D+R+ +R
Sbjct: 493 ATNVPMKDSTGVATLAGRKSILKLAQRMTWSFCHAIGASSFHTWTMVTSKTGEDIRISSR 552

Query: 567 KSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANG 626
           K+++DPG P G++LSA +S WLPV    +FDFLRDE  RSEWDI+S+GG VQ +A++A G
Sbjct: 553 KNLNDPGEPLGVILSAVSSVWLPVSTNVLFDFLRDEARRSEWDIMSSGGSVQSVANLAKG 612

Query: 627 RDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPD 686
           +D GN V+      +Q   S  +++ ILQ+SCT    S V+YAPV+   +  VL G D  
Sbjct: 613 KDRGNVVN------IQKIQSKDNSVWILQDSCTSAYESMVVYAPVEFAGIQSVLTGCDSS 666

Query: 687 YVALLPSGFAILPDGTS-----LHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVA 741
            +A+LPSGF+ILPDG       +      +   GGSL T+AFQILV+  PT KL+  SV 
Sbjct: 667 NLAILPSGFSILPDGIEGRPLVISSRQEEKYTEGGSLFTMAFQILVNPSPTVKLTTESVE 726

Query: 742 TVNNLIACTVERIKASLSCE 761
           +VNNL++CT+  IK SL CE
Sbjct: 727 SVNNLVSCTLRNIKTSLQCE 746


>gi|3047106|gb|AAC13617.1| Arabidopsis thaliana homeodomain protein AHDP (SP:P93041)
           [Arabidopsis thaliana]
 gi|7267412|emb|CAB80882.1| homeodomain protein AHDP [Arabidopsis thaliana]
          Length = 590

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 324/606 (53%), Positives = 427/606 (70%), Gaps = 28/606 (4%)

Query: 169 MRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNY 228
           M  REA+ N  C NCGGP  +G++S +EHHLR+ENARL++E+DR+  +  K++G    ++
Sbjct: 1   MSIREAMRNPICTNCGGPAMLGDVSLEEHHLRIENARLKDELDRVCNLTGKFLGHHHNHH 60

Query: 229 PLLSPPVPSRPLELAVG------NFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIEL 282
                   +  LELAVG      +F   P  GGG         +S        K +++EL
Sbjct: 61  Y-------NSSLELAVGTNNNGGHFAFPPDFGGGGGCLPPQQQQSTVINGIDQKSVLLEL 113

Query: 283 AVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAV 342
           A+ AM+EL+++AQ  EPLW+ SLDG    LN+DEY+RTF      KPTG   EASR + +
Sbjct: 114 ALTAMDELVKLAQSEEPLWVKSLDGERDELNQDEYMRTFS---STKPTGLATEASRTSGM 170

Query: 343 VIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPL 402
           VI+N ++LVE LMD N+W+ +F   V+RA T +V+S G+AG  NGALQ+M AE QV SPL
Sbjct: 171 VIINSLALVETLMDSNRWTEMFPCNVARATTTDVISGGMAGTINGALQLMNAELQVLSPL 230

Query: 403 VPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP--AVRCRRRPSGCLIQEMPNGYSKVT 460
           VP R   ++R+CKQH EG WAVVDVS+D +R +   A   RR PSGC++Q++ NGYSKVT
Sbjct: 231 VPVRNVNFLRFCKQHAEGVWAVVDVSIDPVRENSGGAPVIRRLPSGCVVQDVSNGYSKVT 290

Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITN 520
           WVEH E D+  +H LY+ L+ +G  FG++RW+ATL RQCE LA ++++++ + +   IT 
Sbjct: 291 WVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAILISSSVTSHDNTSIT- 349

Query: 521 QDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGRPPGIV 579
             GRKSMLKLA+RM  +FC+G+SA + H W+ L+    D DVRVMTRKSVDDPG PPGIV
Sbjct: 350 PGGRKSMLKLAQRMTFNFCSGISAPSVHNWSKLTVGNVDPDVRVMTRKSVDDPGEPPGIV 409

Query: 580 LSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVN 639
           LSAATS WLP  P+R++DFLR+E  R EWDILSNGG +QEMAHI  G+D G  VSLLR N
Sbjct: 410 LSAATSVWLPAAPQRLYDFLRNERMRCEWDILSNGGPMQEMAHITKGQDQG--VSLLRSN 467

Query: 640 CLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 699
            +   N++QS+MLILQE+C D + + V+YAPVDI AM+VV+NGGD  YVALLPSGFA+LP
Sbjct: 468 AM---NANQSSMLILQETCIDASGALVVYAPVDIPAMHVVMNGGDSSYVALLPSGFAVLP 524

Query: 700 DGTSLHGANIGEA---ASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKA 756
           DG    G +         GGSLLTVAFQILV+++PTAKL++ SV TVNNLI+CTV++I+A
Sbjct: 525 DGGIDGGGSGDGDQRPVGGGSLLTVAFQILVNNLPTAKLTVESVETVNNLISCTVQKIRA 584

Query: 757 SLSCES 762
           +L CES
Sbjct: 585 ALQCES 590


>gi|302398859|gb|ADL36724.1| HD domain class transcription factor [Malus x domestica]
          Length = 761

 Score =  613 bits (1582), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 322/714 (45%), Positives = 452/714 (63%), Gaps = 51/714 (7%)

Query: 63  EEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE 122
           E+EFD    G  + +   GD++ ++  K+K+YHRHT  QI+EMEA FKE PHPD+KQR++
Sbjct: 82  EDEFDG--EGEHDEDDVDGDNKNKK-KKRKKYHRHTTEQIREMEALFKESPHPDEKQRQQ 138

Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPN 182
           LS++LGL P QVKFWFQN+RTQ+K   ERHEN+ L+ E EKLR ++   RE ++ A CPN
Sbjct: 139 LSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKGEMEKLRDESKAMREQINKACCPN 198

Query: 183 CGGPTAIGE--MSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPL 240
           CG  T   +  ++ +E  LR+ENARL+ E++++ A   KY            PP  S P 
Sbjct: 199 CGTATTSRDATLTTEEQQLRIENARLKSEVEKLRAALVKY------------PPGTSSP- 245

Query: 241 ELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPL 300
             + G           E   + D    I    E+    I+E+   AMEEL +MA  GEPL
Sbjct: 246 SCSAGQ--------DQENRSSLDFYTGIFGLEES---RIMEIVNQAMEELQKMATAGEPL 294

Query: 301 WMTSLDGTAAVLNEDEYVRTF----PRGIGPKPTGFKCEASRETAVVIMNHISLVEILMD 356
           W+ S++    +LN DEY++ F    P    PK +    EASRET +V ++   LV+  MD
Sbjct: 295 WVRSVETGREILNYDEYIKEFNIEVPGNGRPKRS---IEASRETGLVFVDLPRLVQSFMD 351

Query: 357 VNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQ 416
           VNQW  +F  ++S+A T++V++ G   + NGA+Q+M AE Q+ +PLVPTRE Y+VR CKQ
Sbjct: 352 VNQWKEMFPCMISKAATVDVINNGEGDDRNGAVQLMFAELQMLTPLVPTREVYFVRCCKQ 411

Query: 417 HGEGTWAVVDVSLDNLRP---SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVH 473
                WA+VDVS+D +     +  V+CR+RPSGC+I++  NG+ KV WVEH+E     + 
Sbjct: 412 LSPEQWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIEDKTNGHCKVIWVEHLECQRSTIQ 471

Query: 474 NLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAER 533
            +Y+ +V++G AFGA+ WVATL  QCERL   MATN+P  +   +    GRKS+LKLA+R
Sbjct: 472 TMYRTIVNSGLAFGARHWVATLQLQCERLVFFMATNVPMKDSAGVATLAGRKSILKLAQR 531

Query: 534 MVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPK 593
           M  SFC  + AS+ HTWT +S    DD+R+ +RK+ +DPG P G++L A +S WLPV P 
Sbjct: 532 MTASFCRAIGASSYHTWTKISSKTGDDIRIASRKNSNDPGEPLGVILCAVSSVWLPVSPY 591

Query: 594 RVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLI 653
            +FDFLRDE  R+EWDI+ NGG  Q +A+++ G+D GN V+      +QS  S +++M I
Sbjct: 592 LLFDFLRDETRRNEWDIMLNGGPAQTIANLSKGQDRGNAVT------IQSMKSKENSMWI 645

Query: 654 LQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTS-----LHGAN 708
           LQ++C +   S V+YAPVDI  M  V+ G D   +A+LPSGF+ILPDG       L  + 
Sbjct: 646 LQDTCINSYESMVVYAPVDIPGMQSVMTGCDASNIAILPSGFSILPDGLESRPMVLTSSQ 705

Query: 709 IGEAASGGSLLTVAFQILVDSVPTA-KLSLGSVATVNNLIACTVERIKASLSCE 761
              ++ GG+LLT AFQ+L +S  TA KL++ SV +VN LI+CT+  IK SL CE
Sbjct: 706 EDRSSEGGTLLTAAFQVLTNSSTTANKLTMESVESVNTLISCTLRNIKTSLQCE 759


>gi|15242290|ref|NP_200030.1| homeobox-leucine zipper protein HDG7 [Arabidopsis thaliana]
 gi|75180477|sp|Q9LTK3.1|HDG7_ARATH RecName: Full=Homeobox-leucine zipper protein HDG7; AltName:
           Full=HD-ZIP protein HDG7; AltName: Full=Homeodomain
           GLABRA 2-like protein 7; AltName: Full=Homeodomain
           transcription factor HDG7; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 7
 gi|8885530|dbj|BAA97460.1| homeodomain transcription factor-like [Arabidopsis thaliana]
 gi|332008796|gb|AED96179.1| homeobox-leucine zipper protein HDG7 [Arabidopsis thaliana]
          Length = 682

 Score =  612 bits (1579), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 327/717 (45%), Positives = 462/717 (64%), Gaps = 74/717 (10%)

Query: 58  IARLREEEFDSTKSGSENHEGASGDD--QEQRPNKKKR---YHRHTQHQIQEMEAFFKEC 112
           + +L+++EF+S     ++ +  SGD+  QEQRP KKKR   YHRHT +QIQE+E+FFKEC
Sbjct: 20  LGKLKDDEFESRSLSDDSFDAMSGDEDKQEQRPKKKKRKTKYHRHTSYQIQELESFFKEC 79

Query: 113 PHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYR 172
           PHP++KQR EL ++L LE  Q+KFWFQN+RTQMKTQ ERHEN  L+ ENEKLR +N   +
Sbjct: 80  PHPNEKQRLELGKKLTLESKQIKFWFQNRRTQMKTQLERHENVILKQENEKLRLENSFLK 139

Query: 173 EALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLS 232
           E++  + C +CGG    GE+SF++H LR+ENA+L+EE+DRI A+A +++G  +      S
Sbjct: 140 ESMRGSLCIDCGGAVIPGEVSFEQHQLRIENAKLKEELDRICALANRFIGGSI------S 193

Query: 233 PPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIR 292
              PS       G  G+Q    G  + G   L             M ++LA+ AM+EL++
Sbjct: 194 LEQPSN------GGIGSQHLPIGHCVSGGTSL-------------MFMDLAMEAMDELLK 234

Query: 293 MAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVE 352
           +A++   LW +         +E   +  FP              SRET +V++N ++LVE
Sbjct: 235 LAELETSLWSSK--------SEKGSMNHFP-------------GSRETGLVLINSLALVE 273

Query: 353 ILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVR 412
            LMD N+W+ +F  IV+ A TLEV+S G  G+ NG++ +M AEFQV SPLVP ++  ++R
Sbjct: 274 TLMDTNKWAEMFECIVAVASTLEVISNGSDGSRNGSILLMQAEFQVMSPLVPIKQKKFLR 333

Query: 413 YCKQHGEGTWAVVDVSLDNLRPSPAVR----CRRRPSGCLIQEMPNGYSKVTWVEHVEVD 468
           YCKQHG+G WAVVDVS D  R +  ++     +  PSGC+IQ++ NG SKVTW+EH E +
Sbjct: 334 YCKQHGDGLWAVVDVSYDINRGNENLKSYGGSKMFPSGCIIQDIGNGCSKVTWIEHSEYE 393

Query: 469 DRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSML 528
           +   H+LY+ L+S+    GA +W+ATL RQCE    ++++   TG      +  G KS+L
Sbjct: 394 ESHTHSLYQPLLSSSVGLGATKWLATLQRQCESFTMLLSSEDHTG-----LSHAGTKSIL 448

Query: 529 KLAERMVISFCAGVSASTAHTWTTLSGTG-ADDVRVMTRKSVDDPGRPPGIVLSAATSFW 587
           KLA+RM ++F +G++AS  H W  L       D R++TRKS++    P GIVLSAATS W
Sbjct: 449 KLAQRMKLNFYSGITASCIHKWEKLLAENVGQDTRILTRKSLE----PSGIVLSAATSLW 504

Query: 588 LPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSS 647
           LPV  +R+F+FL D   R++WDILSNG  ++    +  G+  G+CVSLLR       + +
Sbjct: 505 LPVTQQRLFEFLCDGKCRNQWDILSNGASMENTLLVPKGQQEGSCVSLLRA---AGNDQN 561

Query: 648 QSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHG- 706
           +S+MLILQE+  D + + V+YAPVDI +MN V++GGD  YVALLPSGF+ILPDG+S    
Sbjct: 562 ESSMLILQETWNDVSGALVVYAPVDIPSMNTVMSGGDSAYVALLPSGFSILPDGSSSSSD 621

Query: 707 -----ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
                  +    S G LLTV FQILV+S+PTAKL++ SV TVNNLIACT+ +I+A+L
Sbjct: 622 QFDTDGGLVNQESKGCLLTVGFQILVNSLPTAKLNVESVETVNNLIACTIHKIRAAL 678


>gi|77378036|gb|ABA70759.1| baby boom interacting protein 1B [Brassica napus]
          Length = 711

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 323/704 (45%), Positives = 460/704 (65%), Gaps = 39/704 (5%)

Query: 74  ENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
           ++H+G+  D       KKKRYHRHT  QIQ +E+ FKECPHPDDKQR +LSRELGL P Q
Sbjct: 20  QHHDGSETD------KKKKRYHRHTAQQIQRLESSFKECPHPDDKQRNQLSRELGLAPRQ 73

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMS 193
           +KFWFQN+RTQ+K QHER +N  L+ EN+K+R +N+  REA+ +A CPNCG P    +  
Sbjct: 74  IKFWFQNRRTQLKAQHERADNNALKAENDKIRCENIAIREAIKHAICPNCGSPPVNEDPY 133

Query: 194 FDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVG----NFGA 249
           FDEH LR+ENA LR++++R+S +A+KY+G+P+ ++     P+   PL+L++     +F  
Sbjct: 134 FDEHKLRIENAHLRDDLERMSTVASKYMGRPISSHLSTLHPLHISPLDLSMTGPSLDFDL 193

Query: 250 QPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTA 309
            P   G  M+   + L +IS   + DKP++ ++A+ AMEEL+R+    EPLW T  DG  
Sbjct: 194 LP---GSSMHSQPNNLATIS---DMDKPLMNDIALTAMEELLRLFNTNEPLW-TRGDGGR 246

Query: 310 AVLNEDEYVRTFPR-GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIV 368
            +L+   Y   FPR G   K    + EASR + +V MN ++LV++ MD  +W  +F  IV
Sbjct: 247 EILDLGSYENLFPRSGNRGKNHNVRTEASRSSGIVFMNAMTLVDMFMDGVKWGELFPCIV 306

Query: 369 SRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS 428
           + + TL V+S+G+ G + GAL +M  E  V SPLV TRE   +RYC+   +G+W VV+VS
Sbjct: 307 ASSKTLAVVSSGMGGTHEGALHLMYEEMAVLSPLVATREFCELRYCQMIEQGSWIVVNVS 366

Query: 429 LDNLR-PSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQLVSTGNAF 486
               +  S +    + PSGCLIQ+MP+GYSKVTWVEHVE +++   H LY++++  G AF
Sbjct: 367 YHLPQFVSQSSHSYKFPSGCLIQDMPSGYSKVTWVEHVETEEKEQTHELYREVIHKGIAF 426

Query: 487 GAKRWVATLDRQCERLASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVISFCAGVSAS 545
           GA+RWV TL R CER AS++A +  + ++ GVI + +G++SM++LA RMV ++C  VS S
Sbjct: 427 GAERWVTTLQRMCERFASLLAPSTSSRDLGGVIPSPEGKRSMMRLAHRMVSNYCLSVSRS 486

Query: 546 TAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
                T ++      VRV   KS +    P G +L AAT+FWLP  P+ VF+FL+DE TR
Sbjct: 487 NNTHSTVVAELNEVGVRVTAHKSPE----PNGTILCAATTFWLPNSPQSVFNFLKDERTR 542

Query: 606 SEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASF 665
            +WD+LSN   VQE+AHIANG   G C+S+LR +   ++ S  +NMLILQE+  D + + 
Sbjct: 543 PQWDVLSNRNAVQEVAHIANGSHPGCCISVLRAS--NASQSQSNNMLILQETSIDSSGAL 600

Query: 666 VIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGE----------AASG 715
           V+Y+PVD+ A+N+ ++G D  Y+ LL SGFAI PDG   H ++  E             G
Sbjct: 601 VVYSPVDLPALNIAMSGDDTSYIPLLSSGFAISPDGN--HSSSTTEQGGGASTSSGFGGG 658

Query: 716 GSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           GSL+TV FQI+V ++P+AKL++ SV TVNNLI  TV +IK  L+
Sbjct: 659 GSLITVGFQIMVSNLPSAKLNMESVETVNNLIGTTVHQIKTGLN 702


>gi|76782208|gb|ABA54874.1| baby boom interacting protein 1A [Brassica napus]
          Length = 718

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 322/704 (45%), Positives = 459/704 (65%), Gaps = 38/704 (5%)

Query: 74  ENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
           ++H+G+  D       KKKRYHRHT  QIQ +E+ FKECPHPDDKQR +LSRELGL P Q
Sbjct: 26  QHHDGSETD------RKKKRYHRHTAQQIQRLESSFKECPHPDDKQRNQLSRELGLAPRQ 79

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMS 193
           +KFWFQN+RTQ+K QHER +N  L+ EN+K+R +N+  REA+ +A CPNCGGP    +  
Sbjct: 80  IKFWFQNRRTQLKAQHERADNNALKAENDKIRCENIAIREAIKHAICPNCGGPPVNEDPY 139

Query: 194 FDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVG----NFGA 249
           FDEH LR+ENA LR+E++R+S +A+KY+G+P+ ++     P+   PL+L++     +F  
Sbjct: 140 FDEHKLRIENAHLRDELERMSTVASKYMGRPISSHLSTLHPLHISPLDLSMTGPSLDFDL 199

Query: 250 QPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTA 309
            P   G  M+   +   +++  +E DKP++ ++A+ AMEEL+R+    EPLW T  DG  
Sbjct: 200 LP---GSSMHSHPN--NNLATISEMDKPLMNDIALTAMEELLRLFNTNEPLW-TRADGGR 253

Query: 310 AVLNEDEYVRTFPR-GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIV 368
            +L+   Y   FPR G   K    + EASR + +V MN ++LV++ MD  +W  +F  IV
Sbjct: 254 EILDLGSYENLFPRSGNRGKNHNVRTEASRSSGIVFMNAMTLVDMFMDGVKWGELFPCIV 313

Query: 369 SRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS 428
           + + TL V+S+G+ G + GAL +M  E  V SPLV TRE   +RYC+   +G+W VV+VS
Sbjct: 314 ASSKTLAVVSSGMGGTHEGALHLMYEEMAVLSPLVATREFCELRYCQMIEQGSWIVVNVS 373

Query: 429 LDNLR-PSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQLVSTGNAF 486
               +  S +    + PSGCLIQ+MPNGYSKVTWVEHVE +++   H LY++++  G AF
Sbjct: 374 YHLPQFVSQSSHSYKFPSGCLIQDMPNGYSKVTWVEHVETEEKEQTHELYREVIHKGIAF 433

Query: 487 GAKRWVATLDRQCERLASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVISFCAGVSAS 545
           GA+RWV TL R CER AS++A +  + ++ GVI + +G++SM++LA RMV ++C  VS S
Sbjct: 434 GAERWVTTLQRMCERFASLLAPSTSSRDLGGVIPSPEGKRSMMRLAHRMVSNYCISVSRS 493

Query: 546 TAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
                T ++      VRV   KS +    P G +L AAT+ WLP  P+ VF+FL+DE  R
Sbjct: 494 NNTHSTVVAELNEVGVRVTAHKSPE----PNGTILCAATTVWLPNSPQNVFNFLKDERIR 549

Query: 606 SEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASF 665
            +WD+LSN   VQE+AHIANG   G C+S+LR +   ++ S  +NMLILQE+  D + + 
Sbjct: 550 PQWDVLSNRNAVQEVAHIANGSHPGCCISVLRAS--NASQSQSNNMLILQETSIDSSGAL 607

Query: 666 VIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGE----------AASG 715
           V+Y+PVD+ A+N+ ++G D  Y+ LL SGFAI PDG   H ++  E             G
Sbjct: 608 VVYSPVDLPALNIAMSGDDTSYIPLLSSGFAISPDGN--HSSSTTEQGGGASTSSGFGGG 665

Query: 716 GSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           GSL+TV FQI+V ++P+AKL++ SV TVNNLI  TV +IK  L+
Sbjct: 666 GSLITVGFQIMVSNLPSAKLNMESVETVNNLIGTTVHQIKTGLN 709


>gi|356522256|ref|XP_003529763.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 751

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 316/711 (44%), Positives = 449/711 (63%), Gaps = 43/711 (6%)

Query: 63  EEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE 122
           EE+FD    G   HE     D + R  KK++YHRHT  QI+EMEA FKE PHPD+KQR++
Sbjct: 70  EEDFD----GEGLHEDDDDGDDKNRKKKKRKYHRHTAEQIREMEALFKESPHPDEKQRQQ 125

Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPN 182
           LS +LGL P QVKFWFQN+RTQ+K   ERHEN+ L+TE ++LR +N   RE ++ + CPN
Sbjct: 126 LSNQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTELDRLREENKAMRETINKSCCPN 185

Query: 183 CGGPTAI--GEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPL 240
           CG  TA     MS +E  L +ENA+L+ E++++     K+             P  + P 
Sbjct: 186 CGMVTATIDASMSTEEKQLLIENAKLKAEVEKLRTALGKF------------SPRTTSPT 233

Query: 241 ELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPL 300
             + G+   +      + Y     L         DK  I+++A  A EELI+MA MGEPL
Sbjct: 234 TSSAGHHDEEENRSSLDFYNGIFGL---------DKSRIMDIANRATEELIKMANMGEPL 284

Query: 301 WMTSLDGTAAVLNEDEYVRTFP--RGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVN 358
           W+ S++    +LN DEYV+ F        +P  F  EASRET VV M+   L++  +DVN
Sbjct: 285 WVRSVETGRDILNYDEYVKEFEVENSGSERPKTF-IEASRETEVVFMDLPRLLQSFLDVN 343

Query: 359 QWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHG 418
           QW  +F  ++S+A T++V+  G   N NGA+Q+M AE Q+ +P+VPTRE Y+VR  KQ  
Sbjct: 344 QWKEMFPCLISKAATVDVICNGEGSNRNGAVQLMFAELQMLTPMVPTREVYFVRCGKQLS 403

Query: 419 EGTWAVVDVSLDNLRP---SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNL 475
           +  WA+VDVS+D +     +  V+CR+RPSGC+I++  NG+ KV WVEH+E     +H +
Sbjct: 404 DEQWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSTIHTM 463

Query: 476 YKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMV 535
           Y+ +V++G AFGA+ W+ TL  QCERL   MATN+P  +   +    GRKS+LKLA+RM 
Sbjct: 464 YRTIVNSGLAFGARHWIETLQLQCERLVFYMATNVPMKDSTGVATLAGRKSILKLAQRMT 523

Query: 536 ISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRV 595
            SFC  V AS+ HTWT ++    +D+R+ +RK++++PG P G++L A +S WLPV P  +
Sbjct: 524 WSFCHAVGASSFHTWTKVTSKTGEDIRISSRKNLNEPGEPLGVILCAVSSVWLPVSPNVL 583

Query: 596 FDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQ 655
           FDFLRDE  R+EWDI+S+GG VQ +A++A G+D GN V++ ++  +QS ++S   + ILQ
Sbjct: 584 FDFLRDEARRNEWDIMSSGGSVQSIANLAKGKDRGNVVNIQKI--IQSKDNS---VWILQ 638

Query: 656 ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTS-----LHGANIG 710
           +SCT    S V+YAPV+   +  VL G D   +A+LPSGF+ILPDG       +      
Sbjct: 639 DSCTSAYESTVVYAPVEFAGIQSVLTGCDSSNLAILPSGFSILPDGIEGRPLVITSRQEE 698

Query: 711 EAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
           +   GGSL T+AFQIL +  PT KL++ SV +VNNL++CT+  I+ SL CE
Sbjct: 699 KYTEGGSLFTMAFQILANPSPTTKLTMESVESVNNLVSCTLRNIRTSLQCE 749


>gi|225466249|ref|XP_002268272.1| PREDICTED: homeobox-leucine zipper protein ROC8 [Vitis vinifera]
 gi|297738149|emb|CBI27350.3| unnamed protein product [Vitis vinifera]
          Length = 714

 Score =  609 bits (1571), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 324/710 (45%), Positives = 457/710 (64%), Gaps = 35/710 (4%)

Query: 78  GASGDDQEQRPNK-KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKF 136
           G+ GD     P + +K Y+RHT  QIQ +EAFFK+CPHPD+ QR++L RELGLE  Q+KF
Sbjct: 9   GSGGDQDGPNPRRGRKVYNRHTPQQIQRLEAFFKDCPHPDEAQRRQLGRELGLESRQIKF 68

Query: 137 WFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDE 196
           WFQNKRTQ KTQHER +NT LR ENE+++ +N+  REAL N  CP+CGGP   GE     
Sbjct: 69  WFQNKRTQTKTQHERADNTALRAENERIQCENLAIREALKNVICPSCGGP-PFGEEERQR 127

Query: 197 H--HLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQ---- 250
           +   L+LENA+L+EE +++S + AKY+GKP+    LL PP     L+ + G+F +Q    
Sbjct: 128 NIEKLQLENAQLKEEHEKVSNLLAKYIGKPITQMHLL-PPALGSSLDFSPGSFPSQETGG 186

Query: 251 ---PGIG---GGEMYGA----ADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPL 300
              P +G   G E+       A ++       + +K ++ E A  AM+ELIR+ ++ EPL
Sbjct: 187 LSIPTVGPALGLELAPVDVCNASVMYQFKGFPDMEKTLMTETAAGAMDELIRLVRINEPL 246

Query: 301 WMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQW 360
           W+ S      VL+ D Y R FP+    K +  + E+S+E+ VV MN + LV + +D N++
Sbjct: 247 WVKSATNEKYVLHHDSYERIFPKATHFKSSNARIESSKESVVVAMNGMQLVNMFLDPNKY 306

Query: 361 STVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEG 420
             +F  IV++A T++VL  G+ G+ +G+LQ+M  +  + SPLV  RE Y++RYC+Q   G
Sbjct: 307 VDLFPTIVTKASTIQVLEAGIIGSRSGSLQLMYEQMHILSPLVAPREFYFLRYCQQIELG 366

Query: 421 TWAVVDVSLDNLRPSP--AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV-HNLYK 477
            W +VDVS D  +     ++R  + PSGC+IQ++P+G SKVTWVEHVEVDD+ + H LY+
Sbjct: 367 VWVMVDVSYDYSKDGQPNSLRFWKLPSGCMIQDLPDGCSKVTWVEHVEVDDKSLTHRLYR 426

Query: 478 QLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVI 536
            LVS   AFGA+R V TL R CERLA +   N PT ++ GVI+  +GR+S++KL  RMV 
Sbjct: 427 DLVSGSLAFGAERMVGTLQRMCERLAYLADENTPTRDLAGVISLPEGRRSIMKLGHRMVK 486

Query: 537 SFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVF 596
            FC  +S S    +  LS      VRV  RKS  +PG+P G+++SAATS WLP+  + +F
Sbjct: 487 DFCGVLSMSGKLDFPQLSEVDTSGVRVSVRKST-EPGQPGGLIVSAATSLWLPMQCQTIF 545

Query: 597 DFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQE 656
           DF+RDE  R +WD+LS+G  V E+AHIANG + GNC S++R         +++NML+LQE
Sbjct: 546 DFIRDEKMRPQWDVLSSGNPVHEIAHIANGVNPGNCTSIIR-----PFVPTENNMLMLQE 600

Query: 657 SCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGE----A 712
           SC +P    V+YAP+DI A+NV + G +   + +LPSGF +  DG S  GA         
Sbjct: 601 SCVEPLGGLVVYAPIDIPAINVAIRGEESGNIPILPSGFIVSGDGRSDSGAGCTSDGNIM 660

Query: 713 ASGGSLLTVAFQILV--DSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
            SGGSLLTVAFQ+LV   + P  +L++ SVATVN LI+ TV++IK +L+C
Sbjct: 661 GSGGSLLTVAFQVLVCGPAAPQQQLNMESVATVNTLISSTVQKIKIALNC 710


>gi|357137911|ref|XP_003570542.1| PREDICTED: homeobox-leucine zipper protein ROC8-like [Brachypodium
           distachyon]
          Length = 713

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 331/717 (46%), Positives = 459/717 (64%), Gaps = 49/717 (6%)

Query: 79  ASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWF 138
           A+G D      +KKRYHRHT  QIQ++EA FKECPHPD+ QR  LSRELGLEP Q+KFWF
Sbjct: 10  AAGSDAAVAQRRKKRYHRHTPRQIQQLEATFKECPHPDENQRMHLSRELGLEPRQIKFWF 69

Query: 139 QNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHH 198
           QN+RTQMK QHER +N  LR EN+K+R +N+  REAL N  CP CGGP    +  FDEH 
Sbjct: 70  QNRRTQMKAQHERADNCFLRAENDKIRCENIAMREALKNVICPTCGGPHTNDDY-FDEHK 128

Query: 199 LRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFG-------AQP 251
           LR+ENA L+EE+DR+S++ +KY+G+P+   P       S                  +  
Sbjct: 129 LRMENAHLKEELDRVSSLTSKYLGRPITQLPSSMQQSLSMSSLDLSMGAAAAAMGGPSLD 188

Query: 252 GIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAA- 310
                    ++ +  +    ++ ++PM+ ++A  AM+ELIR+AQ G+ +W  + +G    
Sbjct: 189 LDLLSGGGSSSGMPAAFQPVSDMERPMMADMATRAMDELIRLAQAGDHVWAKADNGGCCR 248

Query: 311 -VLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVS 369
            VL+ D Y   F +  G +      E SR++ +V++   +LV+I MD ++W+  F  IV+
Sbjct: 249 EVLSVDAYDTVFGKPGGSRGPDVHVEGSRDSCLVLLPAHALVDIFMDSSKWADFFPTIVA 308

Query: 370 RAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL 429
           +A T++VL +G+AG  + +L +M  E  V +P+VPTRE  ++RYC+Q  +G WAV DVS+
Sbjct: 309 KARTVDVLVSGMAGR-SESLVLMQEELHVMTPVVPTRELCFLRYCRQIEQGLWAVADVSV 367

Query: 430 DNLR------------PSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEV---DDRG-VH 473
           D L+              P  R R+ PSGCLI +M NGYSKVTWVEH+E    D++  ++
Sbjct: 368 DLLQQRDHAAASRYYGAPPQARARKLPSGCLIADMSNGYSKVTWVEHMETTEGDNKNPIN 427

Query: 474 NLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAER 533
            LY+ LV +G AFGA RW+A L R C+R A ++A ++P  ++      +G++SM++L+ER
Sbjct: 428 PLYRDLVLSGAAFGAHRWLAALQRACDRHACLVAASMPHRDIAAGVTAEGKRSMMRLSER 487

Query: 534 MVISFCAGVSASTAHTWTTL-------SGTGADDVRVMTRKSVDDPGRPPGIVLSAATSF 586
           MV SFC  +SAS AH WTTL        G     VRVM  +S  DPG+P G+VLSAATS 
Sbjct: 488 MVSSFCGSLSASQAHRWTTLSGPGSSGGGGDDVGVRVMVHRST-DPGQPNGVVLSAATSI 546

Query: 587 WLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANG-RDTGNCVSLLRVNCLQSAN 645
           WLPVP  RV+ F+RDENTRS+WD+LS+G  VQE++ I NG     + +SLLR       N
Sbjct: 547 WLPVPCDRVYAFVRDENTRSQWDVLSHGNPVQEVSRIPNGSHPAASSISLLR-----GLN 601

Query: 646 SSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH 705
           +SQ++MLILQES TD T S V+YAP+D+ A NVV++G DP  + LLPSGF ILPDG+   
Sbjct: 602 ASQNSMLILQESSTDATGSQVVYAPIDLPAANVVMSGEDPSAIPLLPSGFTILPDGSG-- 659

Query: 706 GANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
                     GSL+TVAFQILV S+P+++L+  SVATVN+LI  TVE+IKA+L+C +
Sbjct: 660 ------GPGSGSLVTVAFQILVSSLPSSRLNEESVATVNSLIGTTVEQIKAALNCST 710


>gi|449436842|ref|XP_004136201.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Cucumis
           sativus]
          Length = 803

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 317/741 (42%), Positives = 469/741 (63%), Gaps = 58/741 (7%)

Query: 62  REEEFDSTKSGSENHEGASGDDQ--------------------EQRPNKKKRYHRHTQHQ 101
           +EE     + G E+ E  SG +Q                     Q+  KKKRYHRHT  Q
Sbjct: 47  KEENGLMMRGGKEDMESGSGSEQLVEENQGIEMESNINNNDSITQQNQKKKRYHRHTARQ 106

Query: 102 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTEN 161
           IQEMEA FKECPHPDDKQR +LS+ELGL+P QVKFWFQN+RTQMK Q +R +N  LR EN
Sbjct: 107 IQEMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRSDNVILRAEN 166

Query: 162 EKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYV 221
           E L+ +N R + AL N  CP+CGG   +GE S DE  LRLENARLR++++++ ++  +Y 
Sbjct: 167 ETLKNENYRLQSALRNIICPSCGGQGILGEPSLDEQQLRLENARLRDQLEQVCSMTTRYT 226

Query: 222 GKPVVNYPLLSPPVPSRPLELAVGNFGAQ---PGIGGGEMYGAADLLRSISAP------- 271
           G+P+      +PP+    L+L +  +  Q     +   +M     +L   +A        
Sbjct: 227 GRPIQAMASAAPPLMQPSLDLDMNIYSRQYTEAMVPSSDMMALPSMLPPEAAHFPEGGLL 286

Query: 272 TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKP-- 329
            E +K + ++LAV+++ EL++M ++ EPLW+   +    VLN +E+ R FP  +  K   
Sbjct: 287 IEEEKTLAMDLAVSSIAELVKMCRLTEPLWVRDNESGKEVLNVEEHGRMFPWPLNLKQHL 346

Query: 330 -TGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGA 388
              F+ EA+R++AVVIMN I+LV+  +D N+W  +F  IV++A T++V+S+ V+G+ + +
Sbjct: 347 INEFRTEATRDSAVVIMNSITLVDAFLDANKWMELFPSIVAKAKTVQVISSSVSGHASSS 406

Query: 389 LQVMTAEFQVPSPLVPTRESYYVRYCKQHG-EGTWAVVDVSLDNLRPS---PAVRCRRRP 444
           LQV+         +     ++++R C+Q+  EG+W VVD  +D+   S      R RR+P
Sbjct: 407 LQVV---------IFFFFFAHFLRCCQQNADEGSWTVVDFPIDSFHDSLQHSFPRYRRKP 457

Query: 445 SGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLAS 504
           SGC+IQ+MPNGYS+VTWVEH E++++ +H ++   V +G AFGA RW+A L RQCER+AS
Sbjct: 458 SGCIIQDMPNGYSRVTWVEHAEIEEKPIHQIFNHFVHSGMAFGANRWLAILQRQCERIAS 517

Query: 505 VMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVM 564
           +MA NI   ++GVI + + R++++KLA+RM+ +F   +S S   +WT LS +  D VR+ 
Sbjct: 518 LMARNI--SDLGVIPSPEARQNLMKLAQRMIRTFSVNISTSGGQSWTALSDSPEDTVRIT 575

Query: 565 TRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIA 624
           TRK V +PG+P G++LSA ++ WLP P  RVFD LRDE  RS+ ++LSNG  + E+AHIA
Sbjct: 576 TRKVV-EPGQPNGVILSAVSTTWLPYPHYRVFDLLRDERRRSQLEVLSNGNSLHEVAHIA 634

Query: 625 NGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGD 684
           NG   GNC+SLLR+N   ++NSSQ   L+LQESCTD + S V+YA +D+ ++ + ++G D
Sbjct: 635 NGSHPGNCISLLRINV--ASNSSQHVELMLQESCTDQSGSLVVYATIDVDSIQLAMSGED 692

Query: 685 PDYVALLPSGFAILP-DGTSLHGANIGEAASG------GSLLTVAFQILVDSVPTAKLSL 737
           P  + LLP GF+I+P  G+++ G        G      G LLTV  Q+L  ++P+AKL+L
Sbjct: 693 PSCIPLLPIGFSIVPIIGSTIDGHPAPPPEDGTPNPNSGCLLTVGLQVLASTIPSAKLNL 752

Query: 738 GSVATVNNLIACTVERIKASL 758
            SV  +NN +  TV +I  +L
Sbjct: 753 SSVTAINNHLCNTVHQINIAL 773


>gi|345193175|tpg|DAA34953.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414867891|tpg|DAA46448.1| TPA: outer cell layer4 isoform 1 [Zea mays]
 gi|414867892|tpg|DAA46449.1| TPA: outer cell layer4 isoform 2 [Zea mays]
          Length = 884

 Score =  603 bits (1555), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 333/754 (44%), Positives = 466/754 (61%), Gaps = 76/754 (10%)

Query: 71  SGSENHEGASGDDQEQR----PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE 126
           SG E    A    Q+Q+      KKKRYHRHT HQIQ+MEA FKECPHPDDKQR +LS+E
Sbjct: 116 SGLELQTTADAAGQQQQLATANGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQE 175

Query: 127 LGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGP 186
           LGL+P QVKFWFQN+RTQMK Q +R +N  LR ENE L++DN R + A+ N  CPNCG  
Sbjct: 176 LGLKPRQVKFWFQNRRTQMKAQQDRADNVLLRAENESLKSDNYRLQAAIRNVVCPNCGHA 235

Query: 187 TAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVG--KPVVNYPLL-----SPPVPSRP 239
             +GEMS++E  LR+ENARL++E+DR++ IA +Y G  +P ++   L      PPV   P
Sbjct: 236 AVLGEMSYEEQQLRIENARLKDELDRLACIATRYGGGRQPSMSSSALVCLSAPPPVLMPP 295

Query: 240 LELAVGNFG-----------------------AQPGIGGGEMYGAADLLRSISAPT-EAD 275
           L+L +  +                        +Q   GG E + +        AP  E D
Sbjct: 296 LDLDMNVYSRHFTDQSPVMGCGDLIQSVLGPPSQQITGGAEHHASTPSFMGAMAPVQEQD 355

Query: 276 KPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGI---------G 326
           + ++++LA AA + L +M + GE LW+     ++ V+  DE+ R F   +          
Sbjct: 356 RQLVLDLAAAAADTLAKMCRAGESLWLRRRGASSEVMVADEHARMFSWPVNGGQQDSSAS 415

Query: 327 PKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY- 385
           P     + E SR+  VVIMN I+LV+  +D N+W  +F  IVS+A T+++++ G A  + 
Sbjct: 416 PGGAAARTEGSRDGTVVIMNSITLVDAFLDANKWMELFPSIVSKARTIQIINHGAASGHM 475

Query: 386 -NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHG-EGTWAVVD-----VSLDNLRPSPAV 438
            +G+L +M AE Q PSPLVP RE  + RYC  +G EGTW++VD       L+ L+    V
Sbjct: 476 GSGSLLLMQAELQFPSPLVPAREVVFFRYCVHNGDEGTWSLVDFPAEGFQLEALQTPSVV 535

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEV--DDRGVHNLYKQLVSTGNAFGAKRWVATLD 496
           RC RRPSGC+IQ+MPNGYS V WVEH E+  +++ +H ++K  V++G+AFGA RWV+ L 
Sbjct: 536 RCCRRPSGCIIQDMPNGYSSVVWVEHTEIVGEEKPLHQVFKDYVASGSAFGATRWVSLLQ 595

Query: 497 RQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGT 556
           RQCERLAS +A NI   ++GVI   + R +M+KL++RM+ SF A +SAS + +WT+LS T
Sbjct: 596 RQCERLASELARNI--ADLGVIRTPEARTNMMKLSQRMITSFSANISASGSQSWTSLSET 653

Query: 557 GADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGV 616
             D +RV TRK+  DPG+P G++L+A ++ WLP   ++VF+ L DE  R + +I+S+GG 
Sbjct: 654 TEDTIRVTTRKNT-DPGQPSGVILTAVSTSWLPFNHQKVFELLADEQQRCQLEIMSSGGS 712

Query: 617 VQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPT-ASFVIYAPVDIVA 675
           + E+AHIANG    NC+SLLR+N   ++NSSQ+  L+LQES T P   S V++A VD+ A
Sbjct: 713 LHEVAHIANGSHPKNCISLLRINA--ASNSSQNVELMLQESSTHPDGGSLVVFATVDVDA 770

Query: 676 MNVVLNGGDPDYVALLPSGFAILP---------------DGTSLHGANIGEAASGGSLLT 720
           + V ++G DP Y+ LLP GFAI P               DG S    N  E AS G LLT
Sbjct: 771 IQVTMSGEDPSYIPLLPLGFAIFPAANPSAAATSAAGSGDGQSSPAGNADEPAS-GCLLT 829

Query: 721 VAFQILVDSVPTAKLSLGSVATVNNLIACTVERI 754
           V  Q+L  +VP+AKL+L SV  +N+ +   V +I
Sbjct: 830 VGMQVLASAVPSAKLNLSSVTAINSHVCNAVHQI 863


>gi|162462576|ref|NP_001105126.1| OCL4 protein [Zea mays]
 gi|37051038|emb|CAB96424.2| OCL4 protein [Zea mays]
          Length = 808

 Score =  603 bits (1555), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 333/755 (44%), Positives = 468/755 (61%), Gaps = 78/755 (10%)

Query: 71  SGSENHEGASGDDQEQR----PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE 126
           SG E    A    Q+Q+      KKKRYHRHT HQIQ+MEA FKECPHPDDKQR +LS+E
Sbjct: 40  SGLELQTTADAAGQQQQLATANGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQE 99

Query: 127 LGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGP 186
           LGL+P QVKFWFQN+RTQMK Q +R +N  LR ENE L++DN R + A+ N  CPNCG  
Sbjct: 100 LGLKPRQVKFWFQNRRTQMKAQQDRADNVLLRAENESLKSDNYRLQAAIRNVVCPNCGHA 159

Query: 187 TAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVG--KPVVNYPLL-----SPPVPSRP 239
             +GEMS++E  LR+ENARL++E+DR++ IA +Y G  +P ++   L      PPV   P
Sbjct: 160 AVLGEMSYEEQQLRIENARLKDELDRLACIATRYGGGRQPSMSSSALVCLSAPPPVLMPP 219

Query: 240 LELAVGNFGAQPGIGGGEMYGAADLLRSISAP-------------------------TEA 274
           L+L + N  ++       + G  DL++S+  P                          E 
Sbjct: 220 LDLDM-NVYSRHFTDQSPVMGCGDLIQSVLGPPSQQITGGAEHHASTPSFMGAMAPVQEQ 278

Query: 275 DKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGI--------- 325
           D+ ++++LA AA + L +M + GE LW+     ++ V+  DE+ R F   +         
Sbjct: 279 DRQLVLDLAAAAADTLAKMCRAGESLWLRRRGASSEVMVADEHARMFSWPVNGGQQDSSA 338

Query: 326 GPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
            P     + E SR+  VVIMN I+LV+  +D N+W  +F  I+S+A T++V++ G A  +
Sbjct: 339 SPGGAAARTEGSRDGTVVIMNSITLVDAFLDANKWMELFPSILSKARTIQVINHGSASGH 398

Query: 386 --NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHG-EGTWAVVD-----VSLDNLRPSPA 437
             +G+L +M AE Q PSPLVP RE  + RYC  +G EGTW++VD       L+ L+    
Sbjct: 399 MGSGSLLLMQAELQFPSPLVPAREVVFFRYCVHNGDEGTWSIVDFPAEGFQLEALQTPSV 458

Query: 438 VRCRRRPSGCLIQEMPNGYSKVTWVEHVEV--DDRGVHNLYKQLVSTGNAFGAKRWVATL 495
           VRC RRPSGC+IQ+MPNGYS V WVEH E+  +++ +H ++K  V++G+AFGA RWV+ L
Sbjct: 459 VRCCRRPSGCIIQDMPNGYSSVVWVEHTEIVGEEKPLHQVFKDYVASGSAFGATRWVSLL 518

Query: 496 DRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSG 555
            RQCERLAS +A NI   ++GVI   + R +M+KL++RM+ SF A +SAS + +WT+LS 
Sbjct: 519 QRQCERLASELARNI--ADLGVIRTPEARTNMMKLSQRMITSFSANISASGSQSWTSLSE 576

Query: 556 TGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGG 615
           T  D +RV TRK+  DPG+P G++L+A ++ WLP   ++VF+ L DE  R + +I+S+GG
Sbjct: 577 TTEDTIRVTTRKNT-DPGQPSGVILTAVSTSWLPFNHQKVFELLADEQQRCQLEIMSSGG 635

Query: 616 VVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPT-ASFVIYAPVDIV 674
            + E+AHIANG    NC+SLLR+N   ++NSSQ+  L+LQES T P   S V++A VD+ 
Sbjct: 636 SLHEVAHIANGSHPKNCISLLRINA--ASNSSQNVELMLQESSTHPEGGSLVVFATVDVD 693

Query: 675 AMNVVLNGGDPDYVALLPSGFAILP---------------DGTSLHGANIGEAASGGSLL 719
           A+ V ++G DP Y+ LLP GFAI P               DG S    N  E AS G LL
Sbjct: 694 AIQVTMSGEDPSYIPLLPLGFAIFPAANPSAAATSAAGSGDGQSSPAGNADEPAS-GCLL 752

Query: 720 TVAFQILVDSVPTAKLSLGSVATVNNLIACTVERI 754
           TV  Q+L  +VP+AKL+L SV  +N+ +   V +I
Sbjct: 753 TVGMQVLASAVPSAKLNLSSVTAINSHVCNAVHQI 787


>gi|190349989|emb|CAQ63375.1| putative HD-ZIP IV family transcription factor OCL4 [Zea mays]
          Length = 881

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 334/759 (44%), Positives = 470/759 (61%), Gaps = 78/759 (10%)

Query: 71  SGSENHEGASGDDQEQR----PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE 126
           SG E    A    Q+Q+      KKKRYHRHT HQIQ+MEA FKECPHPDDKQR +LS+E
Sbjct: 116 SGLELQTTADAAGQQQQLATANGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQE 175

Query: 127 LGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGP 186
           LGL+P QVKFWFQN+RTQMK Q +R +N  LR ENE L++DN R + A+ N  CPNCG  
Sbjct: 176 LGLKPRQVKFWFQNRRTQMKAQQDRADNVLLRAENESLKSDNYRLQAAIRNVVCPNCGHA 235

Query: 187 TAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVG--KPVVNYPLL-----SPPVPSRP 239
             +GEMS++E  LR+ENARL++E+DR++ IA +Y G  +P ++   L      PPV   P
Sbjct: 236 AVLGEMSYEEQQLRIENARLKDELDRLACIATRYGGGRQPSMSSSALVCLSAPPPVLMPP 295

Query: 240 LELAVGNFGAQPGIGGGEMYGAADLLRSISAP-------------------------TEA 274
           L+L + N  ++       + G  DL++S+  P                          E 
Sbjct: 296 LDLDM-NVYSRHFTDQSPVMGCGDLIQSVLGPPSQQITGGAEHHASTPSFMGAMAPVQEQ 354

Query: 275 DKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGI--------- 325
           D+ ++++LA AA + L +M + GE LW+     ++ V+  DE+ R F   +         
Sbjct: 355 DRQLVLDLAAAAADTLAKMCRAGESLWLRRRGASSEVMVADEHARMFSWPVNGGQQDSSA 414

Query: 326 GPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
            P     + E SR+  VVIMN I+LV+  +D N+W  +F  I+S+A T++V++ G A  +
Sbjct: 415 SPGGAAARTEGSRDGTVVIMNSITLVDAFLDANKWMELFPSILSKARTIQVINHGSASGH 474

Query: 386 --NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHG-EGTWAVVD-----VSLDNLRPSPA 437
             +G+L +M AE Q PSPLVP RE  + RYC  +G EGTW++VD       L+ L+    
Sbjct: 475 MGSGSLLLMQAELQFPSPLVPAREVVFFRYCVHNGDEGTWSIVDFPAEGFQLEALQTPSV 534

Query: 438 VRCRRRPSGCLIQEMPNGYSKVTWVEHVEV--DDRGVHNLYKQLVSTGNAFGAKRWVATL 495
           VRC RRPSGC+IQ+MPNGYS V WVEH E+  +++ +H ++K  V++G+AFGA RWV+ L
Sbjct: 535 VRCCRRPSGCIIQDMPNGYSSVVWVEHTEIVGEEKPLHQVFKDYVASGSAFGATRWVSLL 594

Query: 496 DRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSG 555
            RQCERLAS +A NI   ++GVI   + R +M+KL++RM+ SF A +SAS + +WT+LS 
Sbjct: 595 QRQCERLASELARNI--ADLGVIRTPEARTNMMKLSQRMITSFSANISASGSQSWTSLSE 652

Query: 556 TGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGG 615
           T  D +RV TRK+  DPG+P G++L+A ++ WLP   ++VF+ L DE  R + +I+S+GG
Sbjct: 653 TTEDTIRVTTRKNT-DPGQPSGVILTAVSTSWLPFNHQKVFELLADEQQRCQLEIMSSGG 711

Query: 616 VVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPT-ASFVIYAPVDIV 674
            + E+AHIANG    NC+SLLR+N   ++NSSQ+  L+LQES T P   S V++A VD+ 
Sbjct: 712 SLHEVAHIANGSHPKNCISLLRINA--ASNSSQNVELMLQESSTHPDGGSLVVFATVDVD 769

Query: 675 AMNVVLNGGDPDYVALLPSGFAILP---------------DGTSLHGANIGEAASGGSLL 719
           A+ V ++G DP Y+ LL  GFAI P               DG S    N  E AS G LL
Sbjct: 770 AIQVTMSGEDPSYIPLLXVGFAIFPAANPSAAANSAAGSGDGQSSPAGNADEPAS-GCLL 828

Query: 720 TVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           TV  Q+L  +VP+AKL+L SV  +N+ +   V +I A+L
Sbjct: 829 TVGMQVLASAVPSAKLNLSSVTAINSHVCNAVHQITAAL 867


>gi|190349991|emb|CAQ63376.1| putative HD-ZIP IV family transcription factor OCL4 [Zea mays]
          Length = 884

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 333/755 (44%), Positives = 468/755 (61%), Gaps = 78/755 (10%)

Query: 71  SGSENHEGASGDDQEQR----PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE 126
           SG E    A    Q+Q+      KKKRYHRHT HQIQ+MEA FKECPHPDDKQR +LS+E
Sbjct: 116 SGLELQTTADAAGQQQQLATANGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQE 175

Query: 127 LGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGP 186
           LGL+P QVKFWFQN+RTQMK Q +R +N  LR ENE L++DN R + A+ N  CPNCG  
Sbjct: 176 LGLKPRQVKFWFQNRRTQMKAQQDRADNVLLRAENESLKSDNYRLQAAIRNVVCPNCGHA 235

Query: 187 TAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVG--KPVVNYPLL-----SPPVPSRP 239
             +GEMS++E  LR+ENARL++E+DR++ IA +Y G  +P ++   L      PPV   P
Sbjct: 236 AVLGEMSYEEQQLRIENARLKDELDRLACIATRYGGGRQPSMSSSALVCLSAPPPVLMPP 295

Query: 240 LELAVGNFGAQPGIGGGEMYGAADLLRSISAP-------------------------TEA 274
           L+L + N  ++       + G  DL++S+  P                          E 
Sbjct: 296 LDLDM-NVYSRHFTDQSPVMGCGDLIQSVLGPPSQQITGGAEHHASTPSFMGAMAPVQEQ 354

Query: 275 DKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGI--------- 325
           D+ ++++LA AA + L +M + GE LW+     ++ V+  DE+ R F   +         
Sbjct: 355 DRQLVLDLAAAAADTLAKMCRAGESLWLRRRGASSEVMVADEHARMFSWPVNGGQQDSSA 414

Query: 326 GPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
            P     + E SR+  VVIMN I+LV+  +D N+W  +F  I+S+A T++V++ G A  +
Sbjct: 415 SPGGAAARTEGSRDGTVVIMNSITLVDAFLDANKWMELFPSILSKARTIQVINHGSASGH 474

Query: 386 --NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHG-EGTWAVVD-----VSLDNLRPSPA 437
             +G+L +M AE Q PSPLVP RE  + RYC  +G EGTW++VD       L+ L+    
Sbjct: 475 MGSGSLLLMQAELQFPSPLVPAREVVFFRYCVHNGDEGTWSIVDFPAEGFQLEALQTPSV 534

Query: 438 VRCRRRPSGCLIQEMPNGYSKVTWVEHVEV--DDRGVHNLYKQLVSTGNAFGAKRWVATL 495
           VRC RRPSGC+IQ+MPNGYS V WVEH E+  +++ +H ++K  V++G+AFGA RWV+ L
Sbjct: 535 VRCCRRPSGCIIQDMPNGYSSVVWVEHTEIVGEEKPLHQVFKDYVASGSAFGATRWVSLL 594

Query: 496 DRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSG 555
            RQCERLAS +A NI   ++GVI   + R +M+KL++RM+ SF A +SAS + +WT+LS 
Sbjct: 595 QRQCERLASELARNI--ADLGVIRTPEARTNMMKLSQRMITSFSANISASGSQSWTSLSE 652

Query: 556 TGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGG 615
           T  D +RV TRK+  DPG+P G++L+A ++ WLP   ++VF+ L DE  R + +I+S+GG
Sbjct: 653 TTEDTIRVTTRKNT-DPGQPSGVILTAVSTSWLPFNHQKVFELLADEQQRCQLEIMSSGG 711

Query: 616 VVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPT-ASFVIYAPVDIV 674
            + E+AHIANG    NC+SLLR+N   ++NSSQ+  L+LQES T P   S V++A VD+ 
Sbjct: 712 SLHEVAHIANGSHPKNCISLLRINA--ASNSSQNVELMLQESSTHPEGGSLVVFATVDVD 769

Query: 675 AMNVVLNGGDPDYVALLPSGFAILP---------------DGTSLHGANIGEAASGGSLL 719
           A+ V ++G DP Y+ LLP GFAI P               DG S    N  E AS G LL
Sbjct: 770 AIQVTMSGEDPSYIPLLPLGFAIFPAANPSAAATSAAGSGDGQSSPAGNADEPAS-GCLL 828

Query: 720 TVAFQILVDSVPTAKLSLGSVATVNNLIACTVERI 754
           TV  Q+L  +VP+AKL+L SV  +N+ +   V +I
Sbjct: 829 TVGMQVLASAVPSAKLNLSSVTAINSHVCNAVHQI 863


>gi|224059096|ref|XP_002299713.1| predicted protein [Populus trichocarpa]
 gi|222846971|gb|EEE84518.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 304/684 (44%), Positives = 427/684 (62%), Gaps = 50/684 (7%)

Query: 98  TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ----HERHE 153
           T  QI+EMEA FKE PHPD+KQR++LS++LGL P QVKFWFQN+RTQ+K +     ERHE
Sbjct: 110 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKARTLAIQERHE 169

Query: 154 NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGE---MSFDEHHLRLENARLREEI 210
           N+ L++E +KLR DN   RE ++ A CPNCG  T   +    S +E  LR+ENA+L+ E+
Sbjct: 170 NSLLKSEMDKLREDNKSMRETINKACCPNCGTATTSRDAALTSTEEQQLRIENAKLKAEV 229

Query: 211 DRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISA 270
           +++ A+  K       +    +       L+   G FG                      
Sbjct: 230 EKLRAVVGKSSPGATASCSAGNEQENRSSLDFYTGIFGL--------------------- 268

Query: 271 PTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF---PRGIGP 327
               DK  I+E A  AMEEL +MA  GEPLW+ S++    +LN DEY + F      I  
Sbjct: 269 ----DKSRIMETANQAMEELKKMATAGEPLWIRSVETGREILNYDEYTKVFGSEDSSING 324

Query: 328 KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNG 387
           +P     EASRET VV ++   LV+  MDV+QW  +F  ++S+A T++V+  G   + NG
Sbjct: 325 RPKR-SIEASRETGVVFIDVPRLVQSFMDVDQWKEMFPCLISKAATVDVICNGEGASRNG 383

Query: 388 ALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP---SPAVRCRRRP 444
           A+Q+M AE Q+ +P+VPTRE Y+VRYCKQ     WA+VDVS+D +     +  V+CR+RP
Sbjct: 384 AVQLMFAEVQMLTPMVPTREVYFVRYCKQLNAEQWAIVDVSIDKVEDNIDASLVKCRKRP 443

Query: 445 SGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLAS 504
           SGC+I++  NG+ KV WVEH++     VH +Y+ +V +G  FGA+ W+ATL  QCERL  
Sbjct: 444 SGCIIEDKSNGHCKVIWVEHLQCQKSTVHTMYRTVVHSGLTFGARHWMATLQLQCERLVF 503

Query: 505 VMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVM 564
            MATN+PT +   +    GRKS+LKLA+RM  SFC  + AS+ HTW  +S    +D+RV 
Sbjct: 504 FMATNVPTKDSTGVATLAGRKSILKLAQRMTWSFCRAICASSYHTWNKVSSKTGEDIRVS 563

Query: 565 TRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIA 624
           +RK+++DPG P G++L A +S WLPV P  +FDFLRDE  R+EWDI+SNGG VQ +A++ 
Sbjct: 564 SRKNLNDPGEPVGVILCAVSSVWLPVVPHILFDFLRDEARRNEWDIMSNGGPVQTIANLI 623

Query: 625 NGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGD 684
            G+D GN  ++L++       S ++NM +LQ+SCT+   S ++YAPVD   M  V+ G D
Sbjct: 624 KGQDRGNAAAILKM------KSKENNMWVLQDSCTNAYESMIVYAPVDTNGMQSVITGCD 677

Query: 685 PDYVALLPSGFAILPDGTSLHGANIG-----EAASGGSLLTVAFQILVDSVPTAKLSLGS 739
              +A+LPSGF+ILPDG       I       +  GG LLT+AFQIL ++ PTAK ++ S
Sbjct: 678 SSNLAILPSGFSILPDGHESRPLVITSRQEERSTEGGCLLTIAFQILTNTSPTAKPTMES 737

Query: 740 VATVNNLIACTVERIKASLSCESA 763
           V ++N LI+CT++ IK SL CE +
Sbjct: 738 VDSINTLISCTLKNIKTSLQCEDS 761


>gi|334188232|ref|NP_199499.3| homeobox-leucine zipper protein HDG5 [Arabidopsis thaliana]
 gi|322510124|sp|Q9FJS2.3|HDG5_ARATH RecName: Full=Homeobox-leucine zipper protein HDG5; AltName:
           Full=HD-ZIP protein HDG5; AltName: Full=Homeodomain
           GLABRA 2-like protein 5; AltName: Full=Homeodomain
           transcription factor HDG5; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 5
 gi|332008060|gb|AED95443.1| homeobox-leucine zipper protein HDG5 [Arabidopsis thaliana]
          Length = 826

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 321/748 (42%), Positives = 473/748 (63%), Gaps = 45/748 (6%)

Query: 48  DMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEA 107
           +M +N S         E+ +  K G+E+      DD++  P KKKRYHRHT  QIQEMEA
Sbjct: 69  EMMENGSAGGSFGSGSEQAEDPKFGNESDVNELHDDEQPPPAKKKRYHRHTNRQIQEMEA 128

Query: 108 FFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRAD 167
            FKE PHPDDKQRK LS ELGL+P QVKFWFQN+RTQMK Q +R+EN  LR EN+ L+++
Sbjct: 129 LFKENPHPDDKQRKRLSAELGLKPRQVKFWFQNRRTQMKAQQDRNENVMLRAENDNLKSE 188

Query: 168 NMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVN 227
           N   +  L   SCP+CGGPT +G++ F+E H  +EN RLREE+DR+  IA++Y G+P+ +
Sbjct: 189 NCHLQAELRCLSCPSCGGPTVLGDIPFNEIH--IENCRLREELDRLCCIASRYTGRPMQS 246

Query: 228 YPLLSPPV----------PSRPLELAV--GNFGAQ--------PGIGGGEMY---GAADL 264
            P   P +          PS  L+++V  GNF  Q        P       +    A + 
Sbjct: 247 MPPSQPLINPSPMLPHHQPSLELDMSVYAGNFPEQSCTDMMMLPPQDTACFFPDQTANNN 306

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMT----SLDGTAAVLNEDEYVRT 320
             +     + +K + +E AV+ ++EL +M    EPLW+      + G    LNE+EY+R 
Sbjct: 307 NNNNMLLADEEKVIAMEFAVSCVQELTKMCDTEEPLWIKKKSDKIGGEILCLNEEEYMRL 366

Query: 321 FPRGIGPKPT--GFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLS 378
           FP  +  +     F  EAS+  AVVIMN I+LV+  ++ ++WS +F  IV+RA T++++S
Sbjct: 367 FPWPMENQNNKGDFLREASKANAVVIMNSITLVDAFLNADKWSEMFCSIVARAKTVQIIS 426

Query: 379 TGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGE-GTWAVVDVSLDN----LR 433
           +GV+G     L +M AE QV SPLVPTRE+Y++RY +Q+ E G WA+VD  +D+    ++
Sbjct: 427 SGVSGASGSLL-LMFAELQVLSPLVPTREAYFLRYVEQNAETGNWAIVDFPIDSFHDQMQ 485

Query: 434 PSPAV--RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRW 491
           P   +    +R+PSGC+IQ+MPNGYS+V WVEHVEVD++ VH  + + V +G AFGA RW
Sbjct: 486 PMNTITHEYKRKPSGCIIQDMPNGYSQVKWVEHVEVDEKHVHETFAEYVKSGMAFGANRW 545

Query: 492 VATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWT 551
           +  L RQCER+AS+MA NI   ++GVI++ + R+++++L++R+V +FC  +S +   +WT
Sbjct: 546 LDVLQRQCERIASLMARNI--TDLGVISSAEARRNIMRLSQRLVKTFCVNISTAYGQSWT 603

Query: 552 TLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDIL 611
            LS T  D VR+ TRK   +PG+P G+VL A ++ WLP    +VFD +RD++ +S  ++L
Sbjct: 604 ALSETTKDTVRITTRKMC-EPGQPTGVVLCAVSTTWLPFSHHQVFDLIRDQHHQSLLEVL 662

Query: 612 SNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPV 671
            NG    E+AHIANG   GNC+SLLR+N   ++NS  +  L+LQESC D + S ++Y+ V
Sbjct: 663 FNGNSPHEVAHIANGSHPGNCISLLRINV--ASNSWHNVELMLQESCIDNSGSLIVYSTV 720

Query: 672 DIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVP 731
           D+ ++   +NG D   + +LP GF+I+P      G ++   +    LLTV  Q+L  +VP
Sbjct: 721 DVDSIQQAMNGEDSSNIPILPLGFSIVPVNPP-EGISVNSHSPPSCLLTVGIQVLASNVP 779

Query: 732 TAKLSLGSVATVNNLIACTVERIKASLS 759
           TAK +L +V T+NN +  TV +I ++LS
Sbjct: 780 TAKPNLSTVTTINNHLCATVNQITSALS 807


>gi|449445947|ref|XP_004140733.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Cucumis
           sativus]
          Length = 706

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 316/702 (45%), Positives = 447/702 (63%), Gaps = 31/702 (4%)

Query: 80  SGDDQEQRPNKK--KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFW 137
           S D+QE   ++K  K YHRH  +QIQ++E+FF++CPHPD+ QR++LSRELGLE  Q+KFW
Sbjct: 11  SPDEQEASNDRKGKKTYHRHNPYQIQQLESFFRQCPHPDENQRRQLSRELGLETKQIKFW 70

Query: 138 FQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGG-PTAIGEMSFDE 196
           FQNKRTQ K Q+ER +N+ LRTENEK++ +N+  REAL N  CP+CGG P    E   + 
Sbjct: 71  FQNKRTQTKAQNERADNSSLRTENEKIQCENLAIREALRNVICPSCGGPPFGEEERQRNL 130

Query: 197 HHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLEL----AVGNFGAQPG 252
             LRLEN+ L+EE +++S + AKY+GKP+     L P + S  L+L    ++      P 
Sbjct: 131 QKLRLENSHLKEEHEKVSNLLAKYIGKPISQLESLLPVLGSS-LDLSPRSSLTQIVPSPA 189

Query: 253 IGGGEMYGAADLLRSISAPTEA------DKPMIIELAVAAMEELIRMAQMGEPLWMTSLD 306
           +   ++     +L   + P ++      +  +++E A   +EELIR+ ++ EPLWM SL+
Sbjct: 190 V---DLISDPVILDGAATPYQSRGINDLENALMLETAATGLEELIRLLRIDEPLWMKSLN 246

Query: 307 GTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSG 366
               VL+ D Y + FPR    K +  + E+S+   VV M+ I LV+  +D ++W+ +F  
Sbjct: 247 DGRYVLHRDSYEKIFPRPNHFKTSSARTESSKALGVVTMSAIQLVDFFLDADKWADLFPT 306

Query: 367 IVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVD 426
           I++ A T  ++  G+ GN +GALQ+M  +  + SPLV  R+  ++R+C+Q   G W +VD
Sbjct: 307 IITNAETFHIIDPGMPGNRSGALQLMYQQMHIFSPLVSPRDFCFLRHCQQIEFGVWVIVD 366

Query: 427 VSLDNLRPS-PAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLYKQLVSTGN 484
           VS + L+    + RC R PSGCLIQEMPNG SKVTWVEHVEVDD+   H LY+ LV    
Sbjct: 367 VSYEILKDCVTSARCWRLPSGCLIQEMPNGCSKVTWVEHVEVDDKTQTHRLYRDLVFNTL 426

Query: 485 AFGAKRWVATLDRQCERLASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVISFCAGVS 543
           A+GA RW+ TL R CERLA       P  E+ GV+T+ +GR+S++KL+ RMV +FC  +S
Sbjct: 427 AYGADRWLFTLQRMCERLAYTFRDCAPNHELGGVLTSPEGRRSIMKLSHRMVKNFCGILS 486

Query: 544 ASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDEN 603
            S    +  LS      VR+  R S  + G+P G V+SAATS WLP+ P+ +F+F RDE 
Sbjct: 487 MSGKIDFPQLSEVNNSGVRISVRIS-SELGQPSGTVVSAATSLWLPLQPETIFNFFRDEK 545

Query: 604 TRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTA 663
            R +WD+LS G  V E+AHI  G   GN +S++R         +++NMLILQESC DP  
Sbjct: 546 ARVQWDVLSYGNPVHEIAHILTGVHPGNLISIIR-----PFVPTENNMLILQESCIDPLG 600

Query: 664 SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAAS----GGSLL 719
           S VIYAP+D+ AMN+  +G DP  + +LPSGF I  DG +  G     +A+     GSLL
Sbjct: 601 SLVIYAPIDMPAMNIATSGQDPSEIPILPSGFVITGDGRTHSGIGASTSATLGRPSGSLL 660

Query: 720 TVAFQILVDSVPTAK-LSLGSVATVNNLIACTVERIKASLSC 760
           T+AFQILV SV ++K L++ SVATVN LI+ TV+RIK +L+C
Sbjct: 661 TIAFQILVSSVSSSKQLNVESVATVNTLISATVQRIKVALNC 702


>gi|357147560|ref|XP_003574393.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Brachypodium
           distachyon]
          Length = 888

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 324/755 (42%), Positives = 455/755 (60%), Gaps = 94/755 (12%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           KKKRYHRHT HQIQ+MEA FKECPHPDDKQR +LS+ELGL+P QVKFWFQN+RTQMK Q 
Sbjct: 125 KKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQ 184

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAI-GEMSFDEHHLRLENARLRE 208
           +R +N  LR ENE L+ DN R + AL N  CP CG P A+  ++ ++E  LR+ENARL++
Sbjct: 185 DRADNVILRAENESLKTDNFRLQAALRNVVCPTCGHPGAVLADVPYEEQTLRVENARLKD 244

Query: 209 EIDRISAIAAKYVGK-----------------PVVNYPLLSPPVPSRPLELAV--GNFGA 249
           E+DR+++IA +Y G                    ++ P+L PP     L+++V   +F  
Sbjct: 245 ELDRLASIATRYGGGRQQQQPGGGMSSLLGCMSAMSAPMLMPP-QQLDLDMSVYSRHFAD 303

Query: 250 QPGIGGGEM--------------------YGAADLLRSISAPT---EADKPMIIELAVAA 286
               GGG M                    +     + S  AP    E D+ ++++LA  A
Sbjct: 304 HQQHGGGAMADHHLMTSVPQLQMADHGHQHPGVSAVSSYMAPVVVQEQDRQLVLDLAATA 363

Query: 287 MEELIRMAQMGEPLWMTSLDGTAA-VLNEDEYVRTFP-------------RGIGPKPTGF 332
            E L RM + G+PLW   + G +  V++  E+ R F                +       
Sbjct: 364 AEHLARMCRAGDPLWARRVAGASGEVMDAAEHARVFSWPVVDAGNKQQQQGDLAAASAAL 423

Query: 333 KCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY--NGALQ 390
           + E +R+ AVVIMN I+LV+  +D N+W  +F  IVS+A T++V+  G A  +  +G+L 
Sbjct: 424 RTEGTRDGAVVIMNSITLVDAFLDANKWMELFPSIVSKARTIQVIHNGAASGHLASGSLI 483

Query: 391 VMTAEFQVPSPLVPTRESYYVRYCKQHG-EGTWAVVDVSLDNL---------RPSPAVRC 440
           +M AE Q  SPLVP RE  + RYC  +  EG+W++VD   D           + S  VRC
Sbjct: 484 LMQAEVQFLSPLVPAREVVFFRYCVHNADEGSWSIVDFPADGFQDDLLQQQQQTSAVVRC 543

Query: 441 RRRPSGCLIQEMPNGYSKVTWVEHVEV--DDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           RRRPSGC+IQ+ PNGYS+V WVEH+EV  D++ +  ++K  V+ G AFGA RWVA L RQ
Sbjct: 544 RRRPSGCIIQDAPNGYSRVVWVEHMEVVGDEKPLQPVFKDHVAGGAAFGATRWVAVLQRQ 603

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGA 558
           CERLAS +A NI   + GVI   + R +M++L++RM+ +FCA +SAS + +WT LS +  
Sbjct: 604 CERLASELARNI--ADQGVIRTPEARTNMMRLSQRMITAFCANISASGSQSWTALSDSTE 661

Query: 559 DDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQ 618
           D +RV TRK+  +PG+P G++L+A ++ WLP   ++VF+ L DE  R + +I+SNG  +Q
Sbjct: 662 DTIRVTTRKNT-EPGQPSGVILTAVSTSWLPFSHQQVFELLADEQQRCQLEIMSNGSSLQ 720

Query: 619 EMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPT-ASFVIYAPVDIVAMN 677
           E+AHIANG    NC+SLLR+N   ++NSSQ+  L+LQE+ T P   S V++A VD+ A+ 
Sbjct: 721 EVAHIANGSHPRNCISLLRINA--ASNSSQNVELLLQETSTHPDGGSLVVFATVDVDAIQ 778

Query: 678 VVLNGGDPDYVALLPSGFAILP--------------DGTSLHGANIGEAASGGSLLTVAF 723
           V ++G DP Y+ LLP GFAI P              DG S  G N  E A+ G LLTV  
Sbjct: 779 VTMSGEDPSYIPLLPLGFAIFPATNPSPSATRANTGDGESTPG-NADEPAN-GCLLTVGM 836

Query: 724 QILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           Q+L  +VP+AKL+L SV  +N+ I  T+ +I  +L
Sbjct: 837 QVLASAVPSAKLNLSSVTAINSHICNTIHQITTAL 871


>gi|357124875|ref|XP_003564122.1| PREDICTED: homeobox-leucine zipper protein ROC8-like [Brachypodium
           distachyon]
          Length = 714

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 318/720 (44%), Positives = 459/720 (63%), Gaps = 41/720 (5%)

Query: 72  GSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
           G +  EG+    Q+Q  N++KRYHRHT  QIQ +E  FKECPHPD+ QR +LSRELGLE 
Sbjct: 4   GDDFPEGSDSHGQQQN-NRRKRYHRHTPRQIQTLEGMFKECPHPDENQRAQLSRELGLEA 62

Query: 132 LQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGE 191
            Q+KFWFQN+RTQMK QHER +N  LR EN+K+R +N+   EAL N  CP CGGP  +GE
Sbjct: 63  RQIKFWFQNRRTQMKAQHERADNCFLRAENDKIRCENIAMGEALKNVICPTCGGP-PVGE 121

Query: 192 MSFDEHHLRLENARLREEIDRISAIAAKYVGKP--VVNYPLLSPPVPSRPLELAVGNFGA 249
             FDE  LR+ENARL+EE+DR+S++A+K++G+P  +   P  +PP+    L+L++G+ G 
Sbjct: 122 DFFDEQKLRMENARLKEELDRVSSVASKFLGRPYSMSQMPHGTPPLSVNSLDLSMGSLGM 181

Query: 250 QPGIGGG------------EMYGAADLLR-SISAP-TEADKPMIIELAVAAMEELIRMAQ 295
                G             E+ G++++ +  + AP +E ++P++  +A  AM+E+IR+A 
Sbjct: 182 GGQPLGVGGLGGGPTPQDLELLGSSEIPQFQMPAPVSEMERPVMAGIAARAMDEVIRLAN 241

Query: 296 MGEPLWMTSLDGTA-AVLNEDEYVRTFPR---GIGPKPTGFKCEASRETAVVIMNHISLV 351
            GE +W+    G     LN D Y   F +       +    + E +R  A V M+   LV
Sbjct: 242 AGEHVWIKVPGGDGYETLNVDTYDSLFGKPGSSSSFRAGDVRVEGTRHCAHVFMSAAPLV 301

Query: 352 EILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYV 411
           E+ MD N+W   F  IV+ A T++ L  G+ G    +L +M  E  + +PLV +RE  ++
Sbjct: 302 EVFMDTNKWMEFFPSIVANARTVDNLVNGLDGRSE-SLILMYEEMHMLTPLVQSREFSFL 360

Query: 412 RYCKQHGEGTWAVVDVSLDNLRPSP---AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVD 468
           RYC+Q  +G WA+ DVS++  R +      R RR PSGCLI +M NGYSKVTWVEH+E++
Sbjct: 361 RYCRQIDQGLWAIADVSVETERDAQFGVPSRSRRLPSGCLIADMANGYSKVTWVEHMEIE 420

Query: 469 DRG-VHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI-PTGEVGVITNQDGRKS 526
           D+G +  LY+ +V++G  FGA+RW+  L   C+R  ++ A  +    ++G +T  DGR+S
Sbjct: 421 DKGPIGVLYRDMVTSGAGFGAQRWLGALSNACDRYGALAALAVMNAADLGAVT-ADGRRS 479

Query: 527 MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRV-MTRKSVDDPGRPPGIVLSAATS 585
           M+KL++RMV +FC  ++A+    WTT+ G GA+D+ V ++   VD+PG P G+VLSAATS
Sbjct: 480 MMKLSQRMVANFCGALTANQLIVWTTIPG-GANDMNVRVSLHRVDEPGLPNGVVLSAATS 538

Query: 586 FWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSAN 645
            WLPVP   VF FLRD NTR++WD+L++G  VQE   I NG D  NCV+LLR       N
Sbjct: 539 VWLPVPCDHVFVFLRDVNTRNQWDVLTHGNTVQEACRIPNGSDPANCVTLLR-----GVN 593

Query: 646 SSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH 705
           +S  +ML+LQESC DP+ S ++Y+P+D+ A+N+V +G D   + LLPSGF ILPDG +  
Sbjct: 594 ASHDSMLVLQESCADPSGSMLVYSPIDMPAVNLVTSGEDTANIPLLPSGFIILPDGRNSV 653

Query: 706 GANIGEAAS-----GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
            A  G  +S      G ++TVAFQIL+ S+P  K++  S+ATV  LI  T+  +K +L+C
Sbjct: 654 SAGGGAGSSGGGVLAGCVVTVAFQILISSLPACKVNSESIATVGGLINTTIANLKTALNC 713


>gi|125533056|gb|EAY79621.1| hypothetical protein OsI_34765 [Oryza sativa Indica Group]
          Length = 866

 Score =  590 bits (1521), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 319/742 (42%), Positives = 455/742 (61%), Gaps = 81/742 (10%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           KKKRYHRHT HQIQ+MEA FKECPHPDDKQR +LS+ELGL+P QVKFWFQN+RTQMK Q 
Sbjct: 118 KKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQ 177

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREE 209
           +R +N  LR ENE L++DN R + A+ N  CPNCG    + +MS++E  LR+ENARL++E
Sbjct: 178 DRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIENARLKDE 237

Query: 210 IDRISAIAAKYVG----KPVVNYPLLS-----PPVPSRPLELAVGNFGAQPGIGGGEMYG 260
           +DR++ IA +Y G    +PV++   LS     PPV   PL+L + N  ++       + G
Sbjct: 238 LDRLACIATRYGGGGGRQPVLSTSALSCISAPPPVLMPPLDLDM-NVYSRHFAEQAPVMG 296

Query: 261 AADLLRSISAP----------------TEADKPMIIELAVAAMEELIRMAQMGEPLWMTS 304
             DL+     P                 E DK ++++LA  A ++L RM + GEPLW+  
Sbjct: 297 CGDLIPPPVVPQHDGAAAYMGAMMAPVQEQDKQLVVDLAATAADQLARMCRAGEPLWVRQ 356

Query: 305 LDGTAAVLNEDEYVRTFPRGIGPKPTG-----FKCEASRETAVVIMNHISLVEILMDVNQ 359
               A V+  +E+ R F   +     G      + E +R+ AVVIMN I+LV+  +D N+
Sbjct: 357 RG--AEVMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMNSINLVDAFLDANK 414

Query: 360 WSTVFSGIVSRAMTLEVLSTGVAGNY--NGALQVMTAEFQVPSPLVPTRESYYVRYCKQH 417
           W  +F  IV +A T+++++ G A  +  +G L +M AE Q  SPLV  RE  + RYC  +
Sbjct: 415 WMELFPSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAAREVVFFRYCVHN 474

Query: 418 G-EGTWAVVDVSL----DNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEV--DDR 470
             EG+WA+VD       + L  +  VRCRRRPSGC+IQ+MPNGYS+V WVEH+E+  +++
Sbjct: 475 ADEGSWAIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRVVWVEHMEMVGEEK 534

Query: 471 GVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKL 530
            +  +++  V++G AFGA RW++ L RQCERLAS +A NI   ++GVI   + R +M+KL
Sbjct: 535 PLQPVFRDYVASGAAFGATRWLSILQRQCERLASELARNI--ADLGVIRTPEARTNMMKL 592

Query: 531 AERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPV 590
           ++RM+ +FCA +SAS   +WT LS +  D +RV TRK+  +PG+P G++L+A ++ WLP 
Sbjct: 593 SQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNT-EPGQPSGVILTAVSTSWLPF 651

Query: 591 PPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSN 650
             ++VF+ L DE  R + +ILSNGG + E+AHIANG    NC+SLLR+N   ++NSSQ+ 
Sbjct: 652 THQQVFELLADEQQRCQLEILSNGGSLHEVAHIANGSHPRNCISLLRINA--ASNSSQNV 709

Query: 651 MLILQESCTDPT-ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGA-- 707
            L+LQES T P   S V++A VD+ A+ V ++G DP Y+ LLP GFAI P  +    A  
Sbjct: 710 ELLLQESSTHPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLGFAIFPATSPSPAAAP 769

Query: 708 ------------NIGEAAS-------------------GGSLLTVAFQILVDSVPTAKLS 736
                         GE +S                    G LLTV  Q+L  +VP+AKL+
Sbjct: 770 TISSSTTTTTGNGNGETSSTPPRNSSSNNNNADELLPPNGCLLTVGMQVLASAVPSAKLN 829

Query: 737 LGSVATVNNLIACTVERIKASL 758
           L SV  +N+ +   + +I A+L
Sbjct: 830 LSSVTAINSHVCNAIHQITAAL 851


>gi|18266646|gb|AAL67592.1|AC018929_14 putative outer cell layer homeo domain protein [Oryza sativa
           Japonica Group]
 gi|125575788|gb|EAZ17072.1| hypothetical protein OsJ_32569 [Oryza sativa Japonica Group]
          Length = 866

 Score =  590 bits (1521), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 319/742 (42%), Positives = 455/742 (61%), Gaps = 81/742 (10%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           KKKRYHRHT HQIQ+MEA FKECPHPDDKQR +LS+ELGL+P QVKFWFQN+RTQMK Q 
Sbjct: 118 KKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQ 177

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREE 209
           +R +N  LR ENE L++DN R + A+ N  CPNCG    + +MS++E  LR+ENARL++E
Sbjct: 178 DRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIENARLKDE 237

Query: 210 IDRISAIAAKYVG----KPVVNYPLLS-----PPVPSRPLELAVGNFGAQPGIGGGEMYG 260
           +DR++ IA +Y G    +PV++   LS     PPV   PL+L + N  ++       + G
Sbjct: 238 LDRLACIATRYGGGGGRQPVLSTSALSCISAPPPVLMPPLDLDM-NVYSRHFAEQAPVMG 296

Query: 261 AADLLRSISAP----------------TEADKPMIIELAVAAMEELIRMAQMGEPLWMTS 304
             DL+     P                 E DK ++++LA  A ++L RM + GEPLW+  
Sbjct: 297 CGDLIPPPVVPQHDGAAAYMGAMMAPVQEQDKQLVVDLAATAADQLARMCRAGEPLWVRQ 356

Query: 305 LDGTAAVLNEDEYVRTFPRGIGPKPTG-----FKCEASRETAVVIMNHISLVEILMDVNQ 359
               A V+  +E+ R F   +     G      + E +R+ AVVIMN I+LV+  +D N+
Sbjct: 357 RG--AEVMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMNSINLVDAFLDANK 414

Query: 360 WSTVFSGIVSRAMTLEVLSTGVAGNY--NGALQVMTAEFQVPSPLVPTRESYYVRYCKQH 417
           W  +F  IV +A T+++++ G A  +  +G L +M AE Q  SPLV  RE  + RYC  +
Sbjct: 415 WMELFPSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAAREVVFFRYCVHN 474

Query: 418 G-EGTWAVVDVSL----DNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEV--DDR 470
             EG+WA+VD       + L  +  VRCRRRPSGC+IQ+MPNGYS+V WVEH+E+  +++
Sbjct: 475 ADEGSWAIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRVVWVEHMEMVGEEK 534

Query: 471 GVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKL 530
            +  +++  V++G AFGA RW++ L RQCERLAS +A NI   ++GVI   + R +M+KL
Sbjct: 535 PLQPVFRDYVASGAAFGATRWLSILQRQCERLASELARNI--ADLGVIRTPEARTNMMKL 592

Query: 531 AERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPV 590
           ++RM+ +FCA +SAS   +WT LS +  D +RV TRK+  +PG+P G++L+A ++ WLP 
Sbjct: 593 SQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNT-EPGQPSGVILTAVSTSWLPF 651

Query: 591 PPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSN 650
             ++VF+ L DE  R + +ILSNGG + E+AHIANG    NC+SLLR+N   ++NSSQ+ 
Sbjct: 652 THQQVFELLADEQQRCQLEILSNGGSLHEVAHIANGSHPRNCISLLRINA--ASNSSQNV 709

Query: 651 MLILQESCTDPT-ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGA-- 707
            L+LQES T P   S V++A VD+ A+ V ++G DP Y+ LLP GFAI P  +    A  
Sbjct: 710 ELLLQESSTHPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLGFAIFPATSPSPAAAP 769

Query: 708 ------------NIGEAAS-------------------GGSLLTVAFQILVDSVPTAKLS 736
                         GE +S                    G LLTV  Q+L  +VP+AKL+
Sbjct: 770 TISSSTTTTTGNGNGETSSTPPRNSSSNNNNADELLPPNGCLLTVGMQVLASAVPSAKLN 829

Query: 737 LGSVATVNNLIACTVERIKASL 758
           L SV  +N+ +   + +I A+L
Sbjct: 830 LSSVTAINSHVCNAIHQITAAL 851


>gi|31339099|dbj|BAC77156.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 879

 Score =  590 bits (1521), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 319/742 (42%), Positives = 455/742 (61%), Gaps = 81/742 (10%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           KKKRYHRHT HQIQ+MEA FKECPHPDDKQR +LS+ELGL+P QVKFWFQN+RTQMK Q 
Sbjct: 131 KKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQ 190

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREE 209
           +R +N  LR ENE L++DN R + A+ N  CPNCG    + +MS++E  LR+ENARL++E
Sbjct: 191 DRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIENARLKDE 250

Query: 210 IDRISAIAAKYVG----KPVVNYPLLS-----PPVPSRPLELAVGNFGAQPGIGGGEMYG 260
           +DR++ IA +Y G    +PV++   LS     PPV   PL+L + N  ++       + G
Sbjct: 251 LDRLACIATRYGGGGGRQPVLSTSALSCISAPPPVLMPPLDLDM-NVYSRHFAEQAPVMG 309

Query: 261 AADLLRSISAP----------------TEADKPMIIELAVAAMEELIRMAQMGEPLWMTS 304
             DL+     P                 E DK ++++LA  A ++L RM + GEPLW+  
Sbjct: 310 CGDLIPPPVVPQHDGAAAYMGAMMAPVQEQDKQLVVDLAATAADQLARMCRAGEPLWVRQ 369

Query: 305 LDGTAAVLNEDEYVRTFPRGIGPKPTG-----FKCEASRETAVVIMNHISLVEILMDVNQ 359
               A V+  +E+ R F   +     G      + E +R+ AVVIMN I+LV+  +D N+
Sbjct: 370 RG--AEVMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMNSINLVDAFLDANK 427

Query: 360 WSTVFSGIVSRAMTLEVLSTGVAGNY--NGALQVMTAEFQVPSPLVPTRESYYVRYCKQH 417
           W  +F  IV +A T+++++ G A  +  +G L +M AE Q  SPLV  RE  + RYC  +
Sbjct: 428 WMELFPSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAAREVVFFRYCVHN 487

Query: 418 G-EGTWAVVDVSL----DNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEV--DDR 470
             EG+WA+VD       + L  +  VRCRRRPSGC+IQ+MPNGYS+V WVEH+E+  +++
Sbjct: 488 ADEGSWAIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRVVWVEHMEMVGEEK 547

Query: 471 GVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKL 530
            +  +++  V++G AFGA RW++ L RQCERLAS +A NI   ++GVI   + R +M+KL
Sbjct: 548 PLQPVFRDYVASGAAFGATRWLSILQRQCERLASELARNI--ADLGVIRTPEARTNMMKL 605

Query: 531 AERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPV 590
           ++RM+ +FCA +SAS   +WT LS +  D +RV TRK+  +PG+P G++L+A ++ WLP 
Sbjct: 606 SQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNT-EPGQPSGVILTAVSTSWLPF 664

Query: 591 PPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSN 650
             ++VF+ L DE  R + +ILSNGG + E+AHIANG    NC+SLLR+N   ++NSSQ+ 
Sbjct: 665 THQQVFELLADEQQRCQLEILSNGGSLHEVAHIANGSHPRNCISLLRINA--ASNSSQNV 722

Query: 651 MLILQESCTDPT-ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGA-- 707
            L+LQES T P   S V++A VD+ A+ V ++G DP Y+ LLP GFAI P  +    A  
Sbjct: 723 ELLLQESSTHPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLGFAIFPATSPSPAAAP 782

Query: 708 ------------NIGEAAS-------------------GGSLLTVAFQILVDSVPTAKLS 736
                         GE +S                    G LLTV  Q+L  +VP+AKL+
Sbjct: 783 TISSSTTTTTGNGNGETSSTPPRNSSSNNNNADELLPPNGCLLTVGMQVLASAVPSAKLN 842

Query: 737 LGSVATVNNLIACTVERIKASL 758
           L SV  +N+ +   + +I A+L
Sbjct: 843 LSSVTAINSHVCNAIHQITAAL 864


>gi|187611428|sp|A2ZAI7.2|ROC3_ORYSI RecName: Full=Homeobox-leucine zipper protein ROC3; AltName:
           Full=GLABR 2-like homeobox protein 3; AltName:
           Full=HD-ZIP protein ROC3; AltName: Full=Homeodomain
           transcription factor ROC3; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 3
          Length = 882

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 319/742 (42%), Positives = 455/742 (61%), Gaps = 81/742 (10%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           KKKRYHRHT HQIQ+MEA FKECPHPDDKQR +LS+ELGL+P QVKFWFQN+RTQMK Q 
Sbjct: 134 KKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQ 193

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREE 209
           +R +N  LR ENE L++DN R + A+ N  CPNCG    + +MS++E  LR+ENARL++E
Sbjct: 194 DRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIENARLKDE 253

Query: 210 IDRISAIAAKYVG----KPVVNYPLLS-----PPVPSRPLELAVGNFGAQPGIGGGEMYG 260
           +DR++ IA +Y G    +PV++   LS     PPV   PL+L + N  ++       + G
Sbjct: 254 LDRLACIATRYGGGGGRQPVLSTSALSCISAPPPVLMPPLDLDM-NVYSRHFAEQAPVMG 312

Query: 261 AADLLRSISAP----------------TEADKPMIIELAVAAMEELIRMAQMGEPLWMTS 304
             DL+     P                 E DK ++++LA  A ++L RM + GEPLW+  
Sbjct: 313 CGDLIPPPVVPQHDGAAAYMGAMMAPVQEQDKQLVVDLAATAADQLARMCRAGEPLWVRQ 372

Query: 305 LDGTAAVLNEDEYVRTFPRGIGPKPTG-----FKCEASRETAVVIMNHISLVEILMDVNQ 359
               A V+  +E+ R F   +     G      + E +R+ AVVIMN I+LV+  +D N+
Sbjct: 373 RG--AEVMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMNSINLVDAFLDANK 430

Query: 360 WSTVFSGIVSRAMTLEVLSTGVAGNY--NGALQVMTAEFQVPSPLVPTRESYYVRYCKQH 417
           W  +F  IV +A T+++++ G A  +  +G L +M AE Q  SPLV  RE  + RYC  +
Sbjct: 431 WMELFPSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAAREVVFFRYCVHN 490

Query: 418 G-EGTWAVVDVSL----DNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEV--DDR 470
             EG+WA+VD       + L  +  VRCRRRPSGC+IQ+MPNGYS+V WVEH+E+  +++
Sbjct: 491 ADEGSWAIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRVVWVEHMEMVGEEK 550

Query: 471 GVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKL 530
            +  +++  V++G AFGA RW++ L RQCERLAS +A NI   ++GVI   + R +M+KL
Sbjct: 551 PLQPVFRDYVASGAAFGATRWLSILQRQCERLASELARNI--ADLGVIRTPEARTNMMKL 608

Query: 531 AERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPV 590
           ++RM+ +FCA +SAS   +WT LS +  D +RV TRK+  +PG+P G++L+A ++ WLP 
Sbjct: 609 SQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNT-EPGQPSGVILTAVSTSWLPF 667

Query: 591 PPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSN 650
             ++VF+ L DE  R + +ILSNGG + E+AHIANG    NC+SLLR+N   ++NSSQ+ 
Sbjct: 668 THQQVFELLADEQQRCQLEILSNGGSLHEVAHIANGSHPRNCISLLRINA--ASNSSQNV 725

Query: 651 MLILQESCTDPT-ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGA-- 707
            L+LQES T P   S V++A VD+ A+ V ++G DP Y+ LLP GFAI P  +    A  
Sbjct: 726 ELLLQESSTHPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLGFAIFPATSPSPAAAP 785

Query: 708 ------------NIGEAAS-------------------GGSLLTVAFQILVDSVPTAKLS 736
                         GE +S                    G LLTV  Q+L  +VP+AKL+
Sbjct: 786 TISSSTTTTTGNGNGETSSTPPRNSSSNNNNADELLPPNGCLLTVGMQVLASAVPSAKLN 845

Query: 737 LGSVATVNNLIACTVERIKASL 758
           L SV  +N+ +   + +I A+L
Sbjct: 846 LSSVTAINSHVCNAIHQITAAL 867


>gi|115483622|ref|NP_001065481.1| Os10g0575600 [Oryza sativa Japonica Group]
 gi|122248972|sp|Q336P2.1|ROC3_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC3; AltName:
           Full=GLABRA 2-like homeobox protein 3; AltName:
           Full=HD-ZIP protein ROC3; AltName: Full=Homeodomain
           transcription factor ROC3; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 3
 gi|78709045|gb|ABB48020.1| OCL4 protein, putative, expressed [Oryza sativa Japonica Group]
 gi|78709046|gb|ABB48021.1| OCL4 protein, putative, expressed [Oryza sativa Japonica Group]
 gi|113640013|dbj|BAF27318.1| Os10g0575600 [Oryza sativa Japonica Group]
          Length = 882

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 319/742 (42%), Positives = 455/742 (61%), Gaps = 81/742 (10%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           KKKRYHRHT HQIQ+MEA FKECPHPDDKQR +LS+ELGL+P QVKFWFQN+RTQMK Q 
Sbjct: 134 KKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQ 193

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREE 209
           +R +N  LR ENE L++DN R + A+ N  CPNCG    + +MS++E  LR+ENARL++E
Sbjct: 194 DRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIENARLKDE 253

Query: 210 IDRISAIAAKYVG----KPVVNYPLLS-----PPVPSRPLELAVGNFGAQPGIGGGEMYG 260
           +DR++ IA +Y G    +PV++   LS     PPV   PL+L + N  ++       + G
Sbjct: 254 LDRLACIATRYGGGGGRQPVLSTSALSCISAPPPVLMPPLDLDM-NVYSRHFAEQAPVMG 312

Query: 261 AADLLRSISAP----------------TEADKPMIIELAVAAMEELIRMAQMGEPLWMTS 304
             DL+     P                 E DK ++++LA  A ++L RM + GEPLW+  
Sbjct: 313 CGDLIPPPVVPQHDGAAAYMGAMMAPVQEQDKQLVVDLAATAADQLARMCRAGEPLWVRQ 372

Query: 305 LDGTAAVLNEDEYVRTFPRGIGPKPTG-----FKCEASRETAVVIMNHISLVEILMDVNQ 359
               A V+  +E+ R F   +     G      + E +R+ AVVIMN I+LV+  +D N+
Sbjct: 373 RG--AEVMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMNSINLVDAFLDANK 430

Query: 360 WSTVFSGIVSRAMTLEVLSTGVAGNY--NGALQVMTAEFQVPSPLVPTRESYYVRYCKQH 417
           W  +F  IV +A T+++++ G A  +  +G L +M AE Q  SPLV  RE  + RYC  +
Sbjct: 431 WMELFPSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAAREVVFFRYCVHN 490

Query: 418 G-EGTWAVVDVSL----DNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEV--DDR 470
             EG+WA+VD       + L  +  VRCRRRPSGC+IQ+MPNGYS+V WVEH+E+  +++
Sbjct: 491 ADEGSWAIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRVVWVEHMEMVGEEK 550

Query: 471 GVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKL 530
            +  +++  V++G AFGA RW++ L RQCERLAS +A NI   ++GVI   + R +M+KL
Sbjct: 551 PLQPVFRDYVASGAAFGATRWLSILQRQCERLASELARNI--ADLGVIRTPEARTNMMKL 608

Query: 531 AERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPV 590
           ++RM+ +FCA +SAS   +WT LS +  D +RV TRK+  +PG+P G++L+A ++ WLP 
Sbjct: 609 SQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNT-EPGQPSGVILTAVSTSWLPF 667

Query: 591 PPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSN 650
             ++VF+ L DE  R + +ILSNGG + E+AHIANG    NC+SLLR+N   ++NSSQ+ 
Sbjct: 668 THQQVFELLADEQQRCQLEILSNGGSLHEVAHIANGSHPRNCISLLRINA--ASNSSQNV 725

Query: 651 MLILQESCTDPT-ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGA-- 707
            L+LQES T P   S V++A VD+ A+ V ++G DP Y+ LLP GFAI P  +    A  
Sbjct: 726 ELLLQESSTHPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLGFAIFPATSPSPAAAP 785

Query: 708 ------------NIGEAAS-------------------GGSLLTVAFQILVDSVPTAKLS 736
                         GE +S                    G LLTV  Q+L  +VP+AKL+
Sbjct: 786 TISSSTTTTTGNGNGETSSTPPRNSSSNNNNADELLPPNGCLLTVGMQVLASAVPSAKLN 845

Query: 737 LGSVATVNNLIACTVERIKASL 758
           L SV  +N+ +   + +I A+L
Sbjct: 846 LSSVTAINSHVCNAIHQITAAL 867


>gi|345193171|tpg|DAA34951.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 787

 Score =  572 bits (1475), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 312/710 (43%), Positives = 438/710 (61%), Gaps = 88/710 (12%)

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           +++P +KK Y+RHT  QI+++EA FKE  HPD+KQR +LSR+LGL+P QVKFWFQN+RT 
Sbjct: 131 QRKPKRKKPYNRHTPRQIEQLEAMFKEFHHPDEKQRAQLSRQLGLDPRQVKFWFQNRRTH 190

Query: 145 MKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
           +K Q ER EN +L+ EN+KLR +N+  REA+ +  C  CGGP  +GE+S +EH LRLENA
Sbjct: 191 LKNQLERQENARLKHENDKLRVENLSIREAIRDLVCSCCGGPAVLGELSPEEHQLRLENA 250

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSP----PVPSRPLELAVGNFGAQPGIGGGEM-- 258
           RLR+E+ R+  + +K++GKP+ +  LL      P+    LELAV   G    +   +M  
Sbjct: 251 RLRDELARVCTVTSKFIGKPMSHMELLLAKEPHPMTGSSLELAVA-VGVGSSVPSSKMPV 309

Query: 259 --------------YGAADLLRSISAP-TEADKPMIIELAVAAMEELIRMAQMGEPLWMT 303
                               + + S P    DK    +LAV+AM EL++MA+M EPLW+ 
Sbjct: 310 STISELAGSTSSSTGTVTTPMVTASLPMVSIDKSKFAQLAVSAMNELVKMARMNEPLWIP 369

Query: 304 SLDGTAA----VLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNH-ISLVEILMDVN 358
           ++    +     LN  EY++ F   +G KPTGF  EASRE+ +V ++   +L+E+ MD  
Sbjct: 370 TIPSPGSPIMETLNFKEYLKAFSPCVGVKPTGFVSEASRESGIVTIDSSAALMEVFMDER 429

Query: 359 QWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHG 418
           +WS +F  IV++A  +E +  G                                      
Sbjct: 430 RWSDIFYCIVAKASIVEEILPG-------------------------------------- 451

Query: 419 EGTWAVVDVSLDNLRPSPAV----RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHN 474
                    S+D L+    +    +CRR PSGC++Q+ PNG  KVTWVEH E  +  VH 
Sbjct: 452 ---------SIDGLQTDQCLATNTKCRRLPSGCVLQDTPNG-CKVTWVEHAEYPEASVHQ 501

Query: 475 LYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERM 534
           LY+ L+ +G A GA RW+ATL RQCE LA +M++           + +G+ S+LKLA RM
Sbjct: 502 LYQPLMRSGLALGAGRWLATLQRQCECLAILMSSLAAPEHDSAAVSLEGKWSLLKLARRM 561

Query: 535 VISFCAGVSASTAHTWTTL---SGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVP 591
           + +FCAG+ AS++  W+ L   +G+   DVRVM + SVD+PG PPG+VLS AT+ WLPV 
Sbjct: 562 MENFCAGMGASSSREWSMLDGFTGSTGKDVRVMVQNSVDEPGVPPGVVLSVATAVWLPVT 621

Query: 592 PKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNM 651
           P+R+F+FLRDE  R+EWDILSNGG +Q++  I+ G+  GN V+LLR +     +S  +++
Sbjct: 622 PERLFNFLRDEELRAEWDILSNGGPMQQVLRISKGQLDGNSVALLRAD---HTDSHLNSI 678

Query: 652 LILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGE 711
           LILQE+CTD + + V+Y PVD  AM +VL GGD   VALLPSGF ILP G++  G  +G 
Sbjct: 679 LILQETCTDRSGAMVVYTPVDFPAMQLVLGGGDSKNVALLPSGFVILPAGSTASG--LGH 736

Query: 712 AASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
            A  GSLLTVAFQILV+S PTAKL++ SV TV +LI+CT+E+IKA+L C+
Sbjct: 737 KAR-GSLLTVAFQILVNSQPTAKLTVESVDTVYSLISCTIEKIKAALHCD 785


>gi|414867890|tpg|DAA46447.1| TPA: outer cell layer4 [Zea mays]
          Length = 731

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 314/717 (43%), Positives = 446/717 (62%), Gaps = 74/717 (10%)

Query: 105 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
           MEA FKECPHPDDKQR +LS+ELGL+P QVKFWFQN+RTQMK Q +R +N  LR ENE L
Sbjct: 1   MEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRADNVLLRAENESL 60

Query: 165 RADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVG-- 222
           ++DN R + A+ N  CPNCG    +GEMS++E  LR+ENARL++E+DR++ IA +Y G  
Sbjct: 61  KSDNYRLQAAIRNVVCPNCGHAAVLGEMSYEEQQLRIENARLKDELDRLACIATRYGGGR 120

Query: 223 KPVVNYPLL-----SPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAP------ 271
           +P ++   L      PPV   PL+L + N  ++       + G  DL++S+  P      
Sbjct: 121 QPSMSSSALVCLSAPPPVLMPPLDLDM-NVYSRHFTDQSPVMGCGDLIQSVLGPPSQQIT 179

Query: 272 -------------------TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVL 312
                               E D+ ++++LA AA + L +M + GE LW+     ++ V+
Sbjct: 180 GGAEHHASTPSFMGAMAPVQEQDRQLVLDLAAAAADTLAKMCRAGESLWLRRRGASSEVM 239

Query: 313 NEDEYVRTFPRGI---------GPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTV 363
             DE+ R F   +          P     + E SR+  VVIMN I+LV+  +D N+W  +
Sbjct: 240 VADEHARMFSWPVNGGQQDSSASPGGAAARTEGSRDGTVVIMNSITLVDAFLDANKWMEL 299

Query: 364 FSGIVSRAMTLEVLSTGVAGNY--NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHG-EG 420
           F  IVS+A T+++++ G A  +  +G+L +M AE Q PSPLVP RE  + RYC  +G EG
Sbjct: 300 FPSIVSKARTIQIINHGAASGHMGSGSLLLMQAELQFPSPLVPAREVVFFRYCVHNGDEG 359

Query: 421 TWAVVD-----VSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEV--DDRGVH 473
           TW++VD       L+ L+    VRC RRPSGC+IQ+MPNGYS V WVEH E+  +++ +H
Sbjct: 360 TWSLVDFPAEGFQLEALQTPSVVRCCRRPSGCIIQDMPNGYSSVVWVEHTEIVGEEKPLH 419

Query: 474 NLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAER 533
            ++K  V++G+AFGA RWV+ L RQCERLAS +A NI   ++GVI   + R +M+KL++R
Sbjct: 420 QVFKDYVASGSAFGATRWVSLLQRQCERLASELARNI--ADLGVIRTPEARTNMMKLSQR 477

Query: 534 MVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPK 593
           M+ SF A +SAS + +WT+LS T  D +RV TRK+  DPG+P G++L+A ++ WLP   +
Sbjct: 478 MITSFSANISASGSQSWTSLSETTEDTIRVTTRKNT-DPGQPSGVILTAVSTSWLPFNHQ 536

Query: 594 RVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLI 653
           +VF+ L DE  R + +I+S+GG + E+AHIANG    NC+SLLR+N   ++NSSQ+  L+
Sbjct: 537 KVFELLADEQQRCQLEIMSSGGSLHEVAHIANGSHPKNCISLLRINA--ASNSSQNVELM 594

Query: 654 LQESCTDPT-ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP------------- 699
           LQES T P   S V++A VD+ A+ V ++G DP Y+ LLP GFAI P             
Sbjct: 595 LQESSTHPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLGFAIFPAANPSAAATSAAG 654

Query: 700 --DGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERI 754
             DG S    N  E AS G LLTV  Q+L  +VP+AKL+L SV  +N+ +   V +I
Sbjct: 655 SGDGQSSPAGNADEPAS-GCLLTVGMQVLASAVPSAKLNLSSVTAINSHVCNAVHQI 710


>gi|18412529|ref|NP_565223.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
 gi|147744564|sp|P46607.3|HGL2_ARATH RecName: Full=Homeobox-leucine zipper protein GLABRA 2; AltName:
           Full=HD-ZIP protein ATHB-10; AltName:
           Full=Homeobox-leucine zipper protein ATHB-10
 gi|13430764|gb|AAK26004.1|AF360294_1 putative homeobox protein GLABRA2 [Arabidopsis thaliana]
 gi|1212757|emb|CAA91183.1| HD-ZIP [Arabidopsis thaliana]
 gi|20152552|emb|CAD29714.1| homeodomain-leucine zipper 10 [Arabidopsis thaliana]
 gi|25054963|gb|AAN71955.1| putative homeobox protein GLABRA2 [Arabidopsis thaliana]
 gi|332198190|gb|AEE36311.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
          Length = 747

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 295/698 (42%), Positives = 425/698 (60%), Gaps = 56/698 (8%)

Query: 78  GASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFW 137
           GA+G+    +  K+K+YHRHT  QI+ MEA FKE PHPD+KQR++LS++LGL P QVKFW
Sbjct: 90  GAAGNKGTNK-RKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVKFW 148

Query: 138 FQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALS--NASCPNCGGPTAIGEMSFD 195
           FQN+RTQ+K   ERHEN+ L+ E EKLR +N   RE+ S  N+SCPNCGG          
Sbjct: 149 FQNRRTQIKAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGG---------G 199

Query: 196 EHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGG 255
              L LEN++L+ E+D++ A   +        YPL +     +   L             
Sbjct: 200 PDDLHLENSKLKAELDKLRAALGR------TPYPLQASCSDDQEHRL------------- 240

Query: 256 GEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNED 315
               G+ D    + A    +K  I E++  A  EL +MA  GEP+W+ S++    +LN D
Sbjct: 241 ----GSLDFYTGVFA---LEKSRIAEISNRATLELQKMATSGEPMWLRSVETGREILNYD 293

Query: 316 EYVRTFPRGIGPKPTGFKC-EASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTL 374
           EY++ FP+       G K  EASR+  +V M+   L +  MDV QW   F+ ++S+A T+
Sbjct: 294 EYLKEFPQAQASSFPGRKTIEASRDAGIVFMDAHKLAQSFMDVGQWKETFACLISKAATV 353

Query: 375 EVLSTGVA-GNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL---- 429
           +V+  G      +GA+Q+M  E Q+ +P+VPTRE Y+VR C+Q     WA+VDVS+    
Sbjct: 354 DVIRQGEGPSRIDGAIQLMFGEMQLLTPVVPTREVYFVRSCRQLSPEKWAIVDVSVSVED 413

Query: 430 -DNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGA 488
            +  + +  ++CR+ PSGC+I++  NG+SKVTWVEH++V    V  L++ LV+TG AFGA
Sbjct: 414 SNTEKEASLLKCRKLPSGCIIEDTSNGHSKVTWVEHLDVSASTVQPLFRSLVNTGLAFGA 473

Query: 489 KRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAH 548
           + WVATL   CERL   MATN+PT +   +T   GRKS+LK+A+RM  SF   ++AS+ H
Sbjct: 474 RHWVATLQLHCERLVFFMATNVPTKDSLGVTTLAGRKSVLKMAQRMTQSFYRAIAASSYH 533

Query: 549 TWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
            WT ++     D+RV +RK++ DPG P G+++ A++S WLPV P  +FDF RDE  R EW
Sbjct: 534 QWTKITTKTGQDMRVSSRKNLHDPGEPTGVIVCASSSLWLPVSPALLFDFFRDEARRHEW 593

Query: 609 DILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIY 668
           D LSNG  VQ +A+++ G+D GN V+      +Q+  S + ++ +LQ+S T+   S V+Y
Sbjct: 594 DALSNGAHVQSIANLSKGQDRGNSVA------IQTVKSREKSIWVLQDSSTNSYESVVVY 647

Query: 669 APVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTS-----LHGANIGEAASGGSLLTVAF 723
           APVDI    +VL G DP  + +LPSGF+I+PDG       +        + GGSLLT+A 
Sbjct: 648 APVDINTTQLVLAGHDPSNIQILPSGFSIIPDGVESRPLVITSTQDDRNSQGGSLLTLAL 707

Query: 724 QILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
           Q L++  P AKL++ SV +V NL++ T+  IK SL  E
Sbjct: 708 QTLINPSPAAKLNMESVESVTNLVSVTLHNIKRSLQIE 745


>gi|12324584|gb|AAG52245.1|AC011717_13 homeobox protein (GLABRA2); 66648-63167 [Arabidopsis thaliana]
 gi|1695244|gb|AAC80260.1| homeodomain protein [Arabidopsis thaliana]
          Length = 745

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 295/698 (42%), Positives = 425/698 (60%), Gaps = 56/698 (8%)

Query: 78  GASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFW 137
           GA+G+    +  K+K+YHRHT  QI+ MEA FKE PHPD+KQR++LS++LGL P QVKFW
Sbjct: 88  GAAGNKGTNK-RKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVKFW 146

Query: 138 FQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALS--NASCPNCGGPTAIGEMSFD 195
           FQN+RTQ+K   ERHEN+ L+ E EKLR +N   RE+ S  N+SCPNCGG          
Sbjct: 147 FQNRRTQIKAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGG---------G 197

Query: 196 EHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGG 255
              L LEN++L+ E+D++ A   +        YPL +     +   L             
Sbjct: 198 PDDLHLENSKLKAELDKLRAALGR------TPYPLQASCSDDQEHRL------------- 238

Query: 256 GEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNED 315
               G+ D    + A    +K  I E++  A  EL +MA  GEP+W+ S++    +LN D
Sbjct: 239 ----GSLDFYTGVFA---LEKSRIAEISNRATLELQKMATSGEPMWLRSVETGREILNYD 291

Query: 316 EYVRTFPRGIGPKPTGFKC-EASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTL 374
           EY++ FP+       G K  EASR+  +V M+   L +  MDV QW   F+ ++S+A T+
Sbjct: 292 EYLKEFPQAQASSFPGRKTIEASRDAGIVFMDAHKLAQSFMDVGQWKETFACLISKAATV 351

Query: 375 EVLSTGVA-GNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL---- 429
           +V+  G      +GA+Q+M  E Q+ +P+VPTRE Y+VR C+Q     WA+VDVS+    
Sbjct: 352 DVIRQGEGPSRIDGAIQLMFGEMQLLTPVVPTREVYFVRSCRQLSPEKWAIVDVSVSVED 411

Query: 430 -DNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGA 488
            +  + +  ++CR+ PSGC+I++  NG+SKVTWVEH++V    V  L++ LV+TG AFGA
Sbjct: 412 SNTEKEASLLKCRKLPSGCIIEDTSNGHSKVTWVEHLDVSASTVQPLFRSLVNTGLAFGA 471

Query: 489 KRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAH 548
           + WVATL   CERL   MATN+PT +   +T   GRKS+LK+A+RM  SF   ++AS+ H
Sbjct: 472 RHWVATLQLHCERLVFFMATNVPTKDSLGVTTLAGRKSVLKMAQRMTQSFYRAIAASSYH 531

Query: 549 TWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
            WT ++     D+RV +RK++ DPG P G+++ A++S WLPV P  +FDF RDE  R EW
Sbjct: 532 QWTKITTKTGQDMRVSSRKNLHDPGEPTGVIVCASSSLWLPVSPALLFDFFRDEARRHEW 591

Query: 609 DILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIY 668
           D LSNG  VQ +A+++ G+D GN V+      +Q+  S + ++ +LQ+S T+   S V+Y
Sbjct: 592 DALSNGAHVQSIANLSKGQDRGNSVA------IQTVKSREKSIWVLQDSSTNSYESVVVY 645

Query: 669 APVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTS-----LHGANIGEAASGGSLLTVAF 723
           APVDI    +VL G DP  + +LPSGF+I+PDG       +        + GGSLLT+A 
Sbjct: 646 APVDINTTQLVLAGHDPSNIQILPSGFSIIPDGVESRPLVITSTQDDRNSQGGSLLTLAL 705

Query: 724 QILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
           Q L++  P AKL++ SV +V NL++ T+  IK SL  E
Sbjct: 706 QTLINPSPAAKLNMESVESVTNLVSVTLHNIKRSLQIE 743


>gi|414867888|tpg|DAA46445.1| TPA: outer cell layer4 isoform 1 [Zea mays]
 gi|414867889|tpg|DAA46446.1| TPA: outer cell layer4 isoform 2 [Zea mays]
          Length = 746

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 314/727 (43%), Positives = 445/727 (61%), Gaps = 79/727 (10%)

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           + RHT          FKECPHPDDKQR +LS+ELGL+P QVKFWFQN+RTQMK Q +R +
Sbjct: 12  HGRHTHR-------LFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRAD 64

Query: 154 NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRI 213
           N  LR ENE L++DN R + A+ N  CPNCG    +GEMS++E  LR+ENARL++E+DR+
Sbjct: 65  NVLLRAENESLKSDNYRLQAAIRNVVCPNCGHAAVLGEMSYEEQQLRIENARLKDELDRL 124

Query: 214 SAIAAKYVG--KPVVNYPLL-----SPPVPSRPLELAVGNFG------------------ 248
           + IA +Y G  +P ++   L      PPV   PL+L +  +                   
Sbjct: 125 ACIATRYGGGRQPSMSSSALVCLSAPPPVLMPPLDLDMNVYSRHFTDQSPVMGCGDLIQS 184

Query: 249 -----AQPGIGGGEMYGAADLLRSISAPT-EADKPMIIELAVAAMEELIRMAQMGEPLWM 302
                +Q   GG E + +        AP  E D+ ++++LA AA + L +M + GE LW+
Sbjct: 185 VLGPPSQQITGGAEHHASTPSFMGAMAPVQEQDRQLVLDLAAAAADTLAKMCRAGESLWL 244

Query: 303 TSLDGTAAVLNEDEYVRTFPRGI---------GPKPTGFKCEASRETAVVIMNHISLVEI 353
                ++ V+  DE+ R F   +          P     + E SR+  VVIMN I+LV+ 
Sbjct: 245 RRRGASSEVMVADEHARMFSWPVNGGQQDSSASPGGAAARTEGSRDGTVVIMNSITLVDA 304

Query: 354 LMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY--NGALQVMTAEFQVPSPLVPTRESYYV 411
            +D N+W  +F  IVS+A T+++++ G A  +  +G+L +M AE Q PSPLVP RE  + 
Sbjct: 305 FLDANKWMELFPSIVSKARTIQIINHGAASGHMGSGSLLLMQAELQFPSPLVPAREVVFF 364

Query: 412 RYCKQHG-EGTWAVVD-----VSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHV 465
           RYC  +G EGTW++VD       L+ L+    VRC RRPSGC+IQ+MPNGYS V WVEH 
Sbjct: 365 RYCVHNGDEGTWSLVDFPAEGFQLEALQTPSVVRCCRRPSGCIIQDMPNGYSSVVWVEHT 424

Query: 466 EV--DDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDG 523
           E+  +++ +H ++K  V++G+AFGA RWV+ L RQCERLAS +A NI   ++GVI   + 
Sbjct: 425 EIVGEEKPLHQVFKDYVASGSAFGATRWVSLLQRQCERLASELARNI--ADLGVIRTPEA 482

Query: 524 RKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAA 583
           R +M+KL++RM+ SF A +SAS + +WT+LS T  D +RV TRK+  DPG+P G++L+A 
Sbjct: 483 RTNMMKLSQRMITSFSANISASGSQSWTSLSETTEDTIRVTTRKNT-DPGQPSGVILTAV 541

Query: 584 TSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQS 643
           ++ WLP   ++VF+ L DE  R + +I+S+GG + E+AHIANG    NC+SLLR+N   +
Sbjct: 542 STSWLPFNHQKVFELLADEQQRCQLEIMSSGGSLHEVAHIANGSHPKNCISLLRINA--A 599

Query: 644 ANSSQSNMLILQESCTDPT-ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP--- 699
           +NSSQ+  L+LQES T P   S V++A VD+ A+ V ++G DP Y+ LLP GFAI P   
Sbjct: 600 SNSSQNVELMLQESSTHPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLGFAIFPAAN 659

Query: 700 ------------DGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLI 747
                       DG S    N  E AS G LLTV  Q+L  +VP+AKL+L SV  +N+ +
Sbjct: 660 PSAAATSAAGSGDGQSSPAGNADEPAS-GCLLTVGMQVLASAVPSAKLNLSSVTAINSHV 718

Query: 748 ACTVERI 754
              V +I
Sbjct: 719 CNAVHQI 725


>gi|125564438|gb|EAZ09818.1| hypothetical protein OsI_32106 [Oryza sativa Indica Group]
          Length = 815

 Score =  563 bits (1452), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 343/780 (43%), Positives = 456/780 (58%), Gaps = 140/780 (17%)

Query: 60  RLREEEFDSTKSGSENHEGASGD----DQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHP 115
           R REEE DS +SGS+N +GASGD    D      KKKRYHRHT  QIQE+EA FKECPHP
Sbjct: 88  RGREEENDS-RSGSDNLDGASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHP 146

Query: 116 DDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREAL 175
           D+KQR ELSR L LE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KLRA+NM  REA+
Sbjct: 147 DEKQRMELSRRLNLESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMTIREAM 206

Query: 176 SNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPV 235
            N  C +CGG   +GE+S +E HLR+ENARL++E+DR+ A+A K++G+P+ +     PP 
Sbjct: 207 RNPMCASCGGAAVLGEVSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSISSPGPPS 266

Query: 236 --PSRPLELAVGN---------------------FGAQPGIGGGEMYGAADLL------- 265
                 LEL VG+                      G   G+ GG +  AA  L       
Sbjct: 267 LQACSGLELGVGSNGGFGLGALGASAAMQSIPDLMGGSSGLTGGPVGSAAMRLPAGIGGL 326

Query: 266 -----RSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRT 320
                 + +     D+ +++ELA+AAM+EL+++AQM EPLW+ SLDG    LN DEY R 
Sbjct: 327 DGAMHAAAADGGAIDRAVLLELALAAMDELVKVAQMDEPLWLPSLDGGFETLNYDEYHRA 386

Query: 321 FPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTG 380
           F R +G  P G+  EA+RE+ + I++ + LV+ LMD  +WS +F  +V+RA T +++S+G
Sbjct: 387 FARVVGQCPAGYVSEATRESGIAIISSVDLVDSLMDAPRWSEMFPCVVARASTTDIISSG 446

Query: 381 VAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTW-AVVDVSLDNLRPSP--- 436
           + G  +G++Q+M AE QV SPLVP RE  ++R+CKQH EG W  V       LRP     
Sbjct: 447 MGGTRSGSIQLMHAELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAVLRPDQNGG 506

Query: 437 -------AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAK 489
                   + CR  P+GC++Q+M NGYSKVTWV H E D+   H LY+ L+ +G A GA+
Sbjct: 507 GGSSSSSYMGCRLLPTGCIVQDMNNGYSKVTWVVHAEYDETAAHQLYRPLLRSGQALGAR 566

Query: 490 RWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHT 549
           RW+A+L RQC+ LA + + ++P  +   IT   GR+SMLKLA+RM  +FCAGV AS A  
Sbjct: 567 RWLASLQRQCQYLAILCSNSLPARDHAAITPV-GRRSMLKLAQRMTDNFCAGVCASAAQK 625

Query: 550 WTTLS--------------GTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRV 595
           W  L               G G D VR+M R SV  PG PPG+VLSA TS          
Sbjct: 626 WRRLDEWRGEGGGGGGGGGGDGEDKVRMMARHSVGAPGEPPGVVLSATTS---------- 675

Query: 596 FDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQ 655
                                            +GN  ++L    LQ   +  S  L++ 
Sbjct: 676 -------------------------------ATSGNQNNML---ILQETCTDSSGSLVV- 700

Query: 656 ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPD----GTSLHGANIGE 711
                       YAPVD+ +M+VV+NGGD  YV+LLPSGFAILPD    G S   A +G 
Sbjct: 701 ------------YAPVDVQSMHVVMNGGDSAYVSLLPSGFAILPDGHNNGASPSPAEVGS 748

Query: 712 AAS-------------GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
            AS              GSL+TVAFQILV+++PTAKL++ SV TV+NL++CT+++IK++L
Sbjct: 749 GASPNSAAGGGGGSNNTGSLVTVAFQILVNNLPTAKLTVESVDTVSNLLSCTIQKIKSAL 808


>gi|213950357|gb|ACJ54443.1| GL2a [Brassica napus]
          Length = 750

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 300/685 (43%), Positives = 414/685 (60%), Gaps = 52/685 (7%)

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           YHRHT  QI+ MEA FKE PHPD+KQR++LS++LGL P QVKFWFQN+RTQ+K   ERHE
Sbjct: 99  YHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 158

Query: 154 NTQLRTENEKLRADNMRYREALSNA---SCPNCGGPTAIGEMSFDEHHLRLENARLREEI 210
           N+ L+ E EKLR +N   RE+ S A   SCPNCGG    G    D H   LEN +L+ E+
Sbjct: 159 NSLLKAELEKLREENKAMRESFSKANSSSCPNCGGGGGGGGSPDDLH---LENTKLKAEL 215

Query: 211 DRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISA 270
           D++ A   +        YPL            A  +   Q  +G  E+Y     L     
Sbjct: 216 DKLRAALGR------TPYPLQ-----------ASCSDDQQRRVGSLELYTGVFAL----- 253

Query: 271 PTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPT 330
               +K  I+E+A  A  EL +MA  GEPLW+ SL+    +LN DEY++ FP+       
Sbjct: 254 ----EKSRIVEIANRATLELQKMATSGEPLWLRSLETGREILNYDEYLKEFPQAQASSFH 309

Query: 331 GFKC-EASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVA-GNYNGA 388
           G K  EASR+  +V M+   L +  MDV QW  +F+ ++S+A+T++V+  G      +GA
Sbjct: 310 GRKTIEASRDVGIVFMDAHKLAQSFMDVEQWKEMFACLISKAVTVDVIRQGEGPSRIDGA 369

Query: 389 LQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL----DN--LRPSPAVRCRR 442
           +Q+M  E Q+ +P+VPTRE Y+VR C+Q     WA+VDVS+    DN   +    +RCR+
Sbjct: 370 IQLMFGEMQLLTPVVPTREVYFVRSCRQLSPEKWAIVDVSVSMEEDNNAEKEGSLLRCRK 429

Query: 443 RPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERL 502
           RPSGC+I++  NG+SKVTWVEH+++    V  L++  V+TG AFGAK WVATL   CERL
Sbjct: 430 RPSGCIIEDTSNGHSKVTWVEHLDLSASTVQPLFRSFVNTGLAFGAKHWVATLQLHCERL 489

Query: 503 ASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVR 562
              MATN+PT +   +T   GRKS+LK+A+RM  SF   ++AS+ H W  ++     D+R
Sbjct: 490 VFFMATNVPTKDSLGVTTLAGRKSVLKMAQRMTQSFYRAIAASSYHQWNKITTKTGQDMR 549

Query: 563 VMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAH 622
           V +RK++ DPG P G+++ A++S WLPV P  +FDF RDE  R EWD LSNG  VQ +  
Sbjct: 550 VSSRKNLHDPGEPTGVIVCASSSLWLPVSPTLLFDFFRDETRRHEWDALSNGAHVQSIVS 609

Query: 623 IANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNG 682
           ++ G+D GN VS      +Q+  S + +  +LQ+SCT+   S V+YAPVDI    +V+ G
Sbjct: 610 LSKGQDRGNSVS------IQTVKSREKSTWVLQDSCTNSYESVVVYAPVDINTTQMVIAG 663

Query: 683 GDPDYVALLPSGFAILPDGTSLHGANIGEA------ASGGSLLTVAFQILVDSVPTAKLS 736
            DP  + +LP GF+I+PDG       I  A        GGSLLT+A Q LV+  P AKL+
Sbjct: 664 HDPSNIQILPCGFSIIPDGVESRQLVISSAQEADRNTQGGSLLTMALQTLVNQSPAAKLN 723

Query: 737 LGSVATVNNLIACTVERIKASLSCE 761
           + SV +V NL++ T+  IK  L  E
Sbjct: 724 MESVESVTNLVSVTLHNIKRCLQIE 748


>gi|334184032|ref|NP_001185443.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
 gi|332198191|gb|AEE36312.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
          Length = 776

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 295/698 (42%), Positives = 425/698 (60%), Gaps = 56/698 (8%)

Query: 78  GASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFW 137
           GA+G+    +  K+K+YHRHT  QI+ MEA FKE PHPD+KQR++LS++LGL P QVKFW
Sbjct: 119 GAAGNKGTNK-RKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVKFW 177

Query: 138 FQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALS--NASCPNCGGPTAIGEMSFD 195
           FQN+RTQ+K   ERHEN+ L+ E EKLR +N   RE+ S  N+SCPNCGG          
Sbjct: 178 FQNRRTQIKAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGG---------G 228

Query: 196 EHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGG 255
              L LEN++L+ E+D++ A   +        YPL +     +   L             
Sbjct: 229 PDDLHLENSKLKAELDKLRAALGR------TPYPLQASCSDDQEHRL------------- 269

Query: 256 GEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNED 315
               G+ D    + A    +K  I E++  A  EL +MA  GEP+W+ S++    +LN D
Sbjct: 270 ----GSLDFYTGVFA---LEKSRIAEISNRATLELQKMATSGEPMWLRSVETGREILNYD 322

Query: 316 EYVRTFPRGIGPKPTGFKC-EASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTL 374
           EY++ FP+       G K  EASR+  +V M+   L +  MDV QW   F+ ++S+A T+
Sbjct: 323 EYLKEFPQAQASSFPGRKTIEASRDAGIVFMDAHKLAQSFMDVGQWKETFACLISKAATV 382

Query: 375 EVLSTGVA-GNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL---- 429
           +V+  G      +GA+Q+M  E Q+ +P+VPTRE Y+VR C+Q     WA+VDVS+    
Sbjct: 383 DVIRQGEGPSRIDGAIQLMFGEMQLLTPVVPTREVYFVRSCRQLSPEKWAIVDVSVSVED 442

Query: 430 -DNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGA 488
            +  + +  ++CR+ PSGC+I++  NG+SKVTWVEH++V    V  L++ LV+TG AFGA
Sbjct: 443 SNTEKEASLLKCRKLPSGCIIEDTSNGHSKVTWVEHLDVSASTVQPLFRSLVNTGLAFGA 502

Query: 489 KRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAH 548
           + WVATL   CERL   MATN+PT +   +T   GRKS+LK+A+RM  SF   ++AS+ H
Sbjct: 503 RHWVATLQLHCERLVFFMATNVPTKDSLGVTTLAGRKSVLKMAQRMTQSFYRAIAASSYH 562

Query: 549 TWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
            WT ++     D+RV +RK++ DPG P G+++ A++S WLPV P  +FDF RDE  R EW
Sbjct: 563 QWTKITTKTGQDMRVSSRKNLHDPGEPTGVIVCASSSLWLPVSPALLFDFFRDEARRHEW 622

Query: 609 DILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIY 668
           D LSNG  VQ +A+++ G+D GN V+      +Q+  S + ++ +LQ+S T+   S V+Y
Sbjct: 623 DALSNGAHVQSIANLSKGQDRGNSVA------IQTVKSREKSIWVLQDSSTNSYESVVVY 676

Query: 669 APVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTS-----LHGANIGEAASGGSLLTVAF 723
           APVDI    +VL G DP  + +LPSGF+I+PDG       +        + GGSLLT+A 
Sbjct: 677 APVDINTTQLVLAGHDPSNIQILPSGFSIIPDGVESRPLVITSTQDDRNSQGGSLLTLAL 736

Query: 724 QILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
           Q L++  P AKL++ SV +V NL++ T+  IK SL  E
Sbjct: 737 QTLINPSPAAKLNMESVESVTNLVSVTLHNIKRSLQIE 774


>gi|449466649|ref|XP_004151038.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Cucumis
           sativus]
          Length = 777

 Score =  560 bits (1443), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 297/692 (42%), Positives = 420/692 (60%), Gaps = 44/692 (6%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           ++K+YHRHT  QI+EMEA FKE PHPD+KQR++LS+ LGL P QVKFWFQN+RTQ+K   
Sbjct: 108 RRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQ 167

Query: 150 ERHENTQLRTENEKLRADNMRYRE-ALSNASCPNCGGPTAI-GEMSFDE-HHLRLENARL 206
           ERHENT L+ E EKLR +N   RE +     CPNCG   A   ++ F     LR++NA+L
Sbjct: 168 ERHENTLLKAEMEKLREENKAMREISKKKIGCPNCGTADATQDDLVFTTTEQLRIKNAKL 227

Query: 207 REEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLR 266
           + E++++ A   KY            P   + P   + GN          + Y     L 
Sbjct: 228 KAEVEKLRAALGKY------------PQAAASPSTYSSGNEQETSNRICLDFYTGIFGL- 274

Query: 267 SISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIG 326
                   +   I+E    A+EEL  MA  G+PLW+ S++    +LN DEY++TF     
Sbjct: 275 --------ENSRIMEKVDEAVEELKTMAAAGDPLWVRSVETGREILNYDEYLKTFQFSNN 326

Query: 327 PKPT----GFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVA 382
              T        EASRETA+V M    LV+  MD NQW  +F  ++S+A T++V+  G A
Sbjct: 327 NSNTRNCLKTHIEASRETALVFMEPSRLVQSFMDENQWKEMFPFMISKAATVDVICNGEA 386

Query: 383 GNYN-GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPS----PA 437
             +N GA+Q+M AE Q+ +PLVPTRE Y++R+CKQ     WA+VDVS++N+  +      
Sbjct: 387 AKWNNGAVQLMFAEVQMLTPLVPTREMYFIRHCKQLDAEQWAIVDVSIENVEDNNIDVSL 446

Query: 438 VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDR 497
           V+ R+RPSGC+I++  NG+ KVT VEH+E     VHNLY+ +V+ G AFGA+ W+ATL  
Sbjct: 447 VKYRKRPSGCIIKDESNGHCKVTMVEHLECVKNKVHNLYRSIVNNGTAFGARHWMATLQL 506

Query: 498 QCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
           QCER A  MATNIP  +   ++   GRKS LKLA+RM  SF   V+AS+  TWT + G  
Sbjct: 507 QCERSAFFMATNIPMKDSTGVSTLAGRKSTLKLAQRMSCSFSQAVAASSYQTWTKVVGKS 566

Query: 558 ADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVV 617
            +D+RV +RK++ DPG P G++L A +S WLP+ P  +FDF RDE+ RS+WD +  G   
Sbjct: 567 GEDIRVCSRKNLSDPGEPIGVILCAVSSLWLPLSPHLLFDFFRDESRRSQWDAMFGGDKA 626

Query: 618 QEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMN 677
           + +A++A G+D GN V+   +  + S  ++ +NM ILQ+S T+ + S V+Y+ VD+ +M 
Sbjct: 627 KTIANLAKGQDRGNSVT---IQTIGSKENNNNNMWILQDSSTNSSESMVVYSGVDVTSMQ 683

Query: 678 VVLNGGDPDYVALLPSGFAILPDGT--------SLHGANIGEAASGGSLLTVAFQILVDS 729
            V++G D   V +LPSGF+ILPDG         +    +      GG+LLT A QIL D+
Sbjct: 684 SVMSGCDSGSVTILPSGFSILPDGADSRPPLLITRRKDDKTCDTHGGALLTAAVQILTDT 743

Query: 730 VPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
            P AK +L SV  V ++I CT++ I+ S+ CE
Sbjct: 744 SPAAKPTLESVEYVKSIICCTLKNIRTSMCCE 775


>gi|213950359|gb|ACJ54444.1| GL2b [Brassica napus]
          Length = 750

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 297/685 (43%), Positives = 413/685 (60%), Gaps = 52/685 (7%)

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           YHRHT  QI+ MEA FKE PHPD+KQR++LS++LGL P QVKFWFQN+RTQ+K   ERHE
Sbjct: 99  YHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 158

Query: 154 NTQLRTENEKLRADNMRYREALSNA---SCPNCGGPTAIGEMSFDEHHLRLENARLREEI 210
           N+ L+ E EKLR +N   RE+ S A   SCPNCGG    G    D H   LEN +L+ E+
Sbjct: 159 NSLLKAELEKLREENKAMRESFSKANSSSCPNCGGGGGGGGSPDDLH---LENTKLKAEL 215

Query: 211 DRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISA 270
           D++ A   +        YPL            A  +      +G  E+Y     L     
Sbjct: 216 DKLRAALGR------TPYPLQ-----------ASCSDDQHRRVGSLELYTGVFAL----- 253

Query: 271 PTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPT 330
               +K  I+E+A  A  E+ +MA  GEPLW+ SL+    +LN DEY++ FP+       
Sbjct: 254 ----EKSRIVEIANRATLEVQKMATSGEPLWLRSLETGREILNYDEYLKEFPQAQASSFH 309

Query: 331 GFKC-EASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVA-GNYNGA 388
           G K  EASR+  +V M+   L +  MDV QW  +F+ ++S+A+T++V+  G      +GA
Sbjct: 310 GRKTIEASRDVGIVFMDAHKLAQSFMDVEQWKEMFACLISKAVTVDVIRQGEGPSRIDGA 369

Query: 389 LQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL----DN---LRPSPAVRCR 441
           +Q+M  E Q+ +P+VPTRE Y+VR C+Q     W +VDVS+    DN    +    +RCR
Sbjct: 370 IQLMFGEMQLLTPVVPTREVYFVRSCRQLSPEKWVIVDVSVSVEEDNNSTEKEGSLLRCR 429

Query: 442 RRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCER 501
           +RPSGC+I++  NG+SKVTWVEH+++    V  L++  V+TG AFGA+ WVATL   CER
Sbjct: 430 KRPSGCIIEDTSNGHSKVTWVEHLDLSASTVQPLFRSFVNTGLAFGARHWVATLQLHCER 489

Query: 502 LASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV 561
           L   MATN+PT +   +T   GRKS+LK+A+RM  SF   ++AS+ H W  ++     D+
Sbjct: 490 LVFFMATNVPTKDSLGVTTLAGRKSVLKMAQRMTQSFYRAIAASSYHQWNKITTKTGQDM 549

Query: 562 RVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMA 621
           RV +RK++ DPG P G+++ A++S WLPV P  +FDF RDE  R EWD LSNG  VQ + 
Sbjct: 550 RVSSRKNLHDPGEPTGVIVCASSSLWLPVSPTLLFDFFRDETRRHEWDALSNGAHVQSIV 609

Query: 622 HIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLN 681
            ++ G+D GN VS      +Q+  S + +  +LQ+SCT+   S V+YAPVDI    +V+ 
Sbjct: 610 SLSKGQDRGNSVS------IQTVKSREKSTWVLQDSCTNSYESVVVYAPVDINTTQLVIA 663

Query: 682 GGDPDYVALLPSGFAILPDGTSLHGANIGEA-----ASGGSLLTVAFQILVDSVPTAKLS 736
           G DP  + +LP GF+I+PDG       I  A       GGSLLT+A Q LV+  P AKL+
Sbjct: 664 GHDPSNIQILPCGFSIIPDGVESRQLVISSAQEDRNTQGGSLLTLALQTLVNQSPAAKLN 723

Query: 737 LGSVATVNNLIACTVERIKASLSCE 761
           + SV +V NL++ T+  IK SL  E
Sbjct: 724 MESVESVTNLVSVTLHNIKRSLQIE 748


>gi|218197780|gb|EEC80207.1| hypothetical protein OsI_22100 [Oryza sativa Indica Group]
          Length = 613

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 283/572 (49%), Positives = 386/572 (67%), Gaps = 23/572 (4%)

Query: 81  GDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
           G D ++R   +KRYHRHT  QIQ++EA FKECPHPD+ QR +LSRELGLEP Q+KFWFQN
Sbjct: 9   GSDSQRR---RKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIKFWFQN 65

Query: 141 KRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLR 200
           +RTQMK QHER +N  LR EN+K+R +N+  REAL N  CP CGGP  +GE  FDE  LR
Sbjct: 66  RRTQMKAQHERADNCFLRAENDKIRCENIAIREALKNVICPTCGGP-PVGEDYFDEQKLR 124

Query: 201 LENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYG 260
           +ENARL+EE+DR+S + +KY+G+P    P  +PP+    L+L+VG  G  P +    + G
Sbjct: 125 MENARLKEELDRVSNLTSKYLGRPFTQLPPATPPMTVSSLDLSVGGMGG-PSLDLDLLSG 183

Query: 261 AAD-LLRSISAP-TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAA------VL 312
            +  +   + AP ++ ++PM+ E+A  AM+ELIR+AQ G+ +W  S  G  +       L
Sbjct: 184 GSSGIPFQLPAPVSDMERPMMAEMATRAMDELIRLAQAGDHIWSKSPGGGVSGGDARETL 243

Query: 313 NEDEYVRTFPR-GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRA 371
           N D Y   F + G   +      E SRE+ +V+M+ ++L ++ MD N+W   F  IVS+A
Sbjct: 244 NVDTYDSIFSKPGGSYRAPSINVEGSRESGLVLMSAVALADVFMDTNKWMEFFPSIVSKA 303

Query: 372 MTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN 431
            T++VL  G+ G  + +L +M  E  + +P VPTRE  +VRYC+Q  +G WA+ DVS+D 
Sbjct: 304 HTIDVLVNGMGGR-SESLILMYEELHIMTPAVPTREVNFVRYCRQIEQGLWAIADVSVDL 362

Query: 432 LRP----SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLYKQLVSTGNAF 486
            R     +P  R RR PSGCLI +M NGYSKVTWVEH+EV+++  ++ LY+ LV +G AF
Sbjct: 363 QRDAHFGAPPPRSRRLPSGCLIADMANGYSKVTWVEHMEVEEKSPINVLYRDLVLSGAAF 422

Query: 487 GAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSAST 546
           GA RW+A L R CER AS++A  +P    GV    +G++SM+KL++RMV SFC+ + AS 
Sbjct: 423 GAHRWLAALQRACERYASLVALGVPHHIAGV--TPEGKRSMMKLSQRMVNSFCSSLGASQ 480

Query: 547 AHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRS 606
            H WTTLSG+    VRV   +S  DPG+P G+VLSAATS WLPVP   VF F+RDENTRS
Sbjct: 481 MHQWTTLSGSNEVSVRVTMHRST-DPGQPNGVVLSAATSIWLPVPCDHVFAFVRDENTRS 539

Query: 607 EWDILSNGGVVQEMAHIANGRDTGNCVSLLRV 638
           +WD+LS+G  VQE++ I NG + GNC+SLLR+
Sbjct: 540 QWDVLSHGNQVQEVSRIPNGSNPGNCISLLRI 571



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 32/40 (80%)

Query: 723 FQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
            +ILV S+P++KL+  SVATVN LI  TVE+IKA+L+C +
Sbjct: 569 LRILVSSLPSSKLNAESVATVNGLITTTVEQIKAALNCSA 608


>gi|222635166|gb|EEE65298.1| hypothetical protein OsJ_20535 [Oryza sativa Japonica Group]
          Length = 575

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 284/572 (49%), Positives = 386/572 (67%), Gaps = 23/572 (4%)

Query: 81  GDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
           G D ++R   +KRYHRHT  QIQ++EA FKECPHPD+ QR +LSRELGLEP Q+KFWFQN
Sbjct: 9   GSDSQRR---RKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIKFWFQN 65

Query: 141 KRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLR 200
           +RTQMK QHER +N  LR EN+K+R +N+  REAL N  CP CGGP  +GE  FDE  LR
Sbjct: 66  RRTQMKAQHERADNCFLRAENDKIRCENIAIREALKNVICPTCGGP-PVGEDYFDEQKLR 124

Query: 201 LENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYG 260
           +ENARL+EE+DR+S + +KY+G+P    P  +PP+    L+L+VG  G  P +    + G
Sbjct: 125 MENARLKEELDRVSNLTSKYLGRPFTQLPPATPPMTVSSLDLSVGGMGG-PSLDLDLLSG 183

Query: 261 AAD-LLRSISAP-TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAA------VL 312
            +  +   + AP ++ ++PM+ E+A  AM+ELIR+AQ G+ +W  S  G  +       L
Sbjct: 184 GSSGIPFQLPAPVSDMERPMMAEMATRAMDELIRLAQAGDHIWSKSPGGGVSGGDARETL 243

Query: 313 NEDEYVRTFPR-GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRA 371
           N D Y   F + G   +      E SRE+ +V+M+ ++L ++ MD N+W   F  IVS+A
Sbjct: 244 NVDTYDSIFSKPGGSYRAPSINVEGSRESGLVLMSAVALADVFMDTNKWMEFFPSIVSKA 303

Query: 372 MTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN 431
            T++VL  G+ G  + +L +M  E  + +P VPTRE  +VRYC+Q  +G WA+ DVS+D 
Sbjct: 304 HTIDVLVNGMGGR-SESLILMYEELHIMTPAVPTREVNFVRYCRQIEQGLWAIADVSVDL 362

Query: 432 LRP----SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLYKQLVSTGNAF 486
            R     +P  R RR PSGCLI +M NGYSKVTWVEH+EV+++  ++ LY+ LV +G AF
Sbjct: 363 QRDAHFGAPPPRSRRLPSGCLIADMANGYSKVTWVEHMEVEEKSPINVLYRDLVLSGAAF 422

Query: 487 GAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSAST 546
           GA RW+A L R CER AS++A  +P    GV    +G++SM+KL++RMV SFC+ + AS 
Sbjct: 423 GAHRWLAALQRACERYASLVALGVPHHIAGVTP--EGKRSMMKLSQRMVNSFCSSLGASQ 480

Query: 547 AHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRS 606
            H WTTLSG+    VRV   +S  DPG+P G+VLSAATS WLPVP   VF F+RDENTRS
Sbjct: 481 MHQWTTLSGSNEVSVRVTMHRST-DPGQPNGVVLSAATSIWLPVPCDHVFAFVRDENTRS 539

Query: 607 EWDILSNGGVVQEMAHIANGRDTGNCVSLLRV 638
           +WD+LS+G  VQE++ I NG + GNC+SLLRV
Sbjct: 540 QWDVLSHGNQVQEVSRIPNGSNPGNCISLLRV 571


>gi|213950363|gb|ACJ54446.1| GL2a [Brassica oleracea]
          Length = 750

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 296/685 (43%), Positives = 413/685 (60%), Gaps = 52/685 (7%)

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           YHRHT  QI+ MEA FKE PHPD+KQR++LS++LGL P QVKFWFQN+RTQ+K   ERHE
Sbjct: 99  YHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 158

Query: 154 NTQLRTENEKLRADNMRYREALSNA---SCPNCGGPTAIGEMSFDEHHLRLENARLREEI 210
           N+ L+ E EKLR +N   RE+ S A   SCPNCGG    G    D H   LEN +L+ E+
Sbjct: 159 NSLLKAELEKLREENKAMRESFSKANSSSCPNCGGGGGGGGSPDDLH---LENTKLKAEL 215

Query: 211 DRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISA 270
           D++ A   +        YPL            A  +      +G  E+Y     L     
Sbjct: 216 DKLRAALGR------TPYPLQ-----------ASCSDDQHRRVGSLELYTGVFAL----- 253

Query: 271 PTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPT 330
               +K  I+E+A  A  E+ +MA  GEPLW+ SL+    +LN DEY++ FP+       
Sbjct: 254 ----EKSRIVEIANRATLEVQKMATSGEPLWLRSLETGREILNYDEYLKEFPQAQASSFH 309

Query: 331 GFKC-EASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVA-GNYNGA 388
           G K  EASR+  +V M+   L +  MDV QW  +F+ ++S+A+T++V+  G      +GA
Sbjct: 310 GRKTIEASRDVGIVFMDAHKLAQSFMDVEQWKEMFACLISKAVTVDVIRQGEGPSRIDGA 369

Query: 389 LQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL----DN---LRPSPAVRCR 441
           +Q+M  E Q+ +P+VPTRE Y+VR C+Q     W +VDVS+    DN    +    +RCR
Sbjct: 370 IQLMFGEMQLLTPVVPTREVYFVRSCRQLSPEKWVIVDVSVSVEEDNNSTEKEGSLLRCR 429

Query: 442 RRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCER 501
           +RPSGC+I++  NG+SKVTWVEH+++    V  L++  V+TG AFGA+ WVATL   CER
Sbjct: 430 KRPSGCIIEDTSNGHSKVTWVEHLDLSASTVQPLFRSFVNTGLAFGARHWVATLQLHCER 489

Query: 502 LASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV 561
           L   MATN+PT +   +T   GRKS+LK+A+RM  SF   ++AS+ H W  ++     D+
Sbjct: 490 LVFFMATNVPTKDSLGVTTLAGRKSVLKMAQRMTQSFYRAIAASSYHQWNKITTKTGQDM 549

Query: 562 RVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMA 621
           RV +RK++ DPG P G+++ A++S WLPV P  +FDF RDE  R EWD LSNG  VQ + 
Sbjct: 550 RVSSRKNLHDPGEPTGVIVCASSSLWLPVSPTLLFDFFRDETRRHEWDALSNGAHVQSIV 609

Query: 622 HIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLN 681
            ++ G+D GN VS      +Q+  S + +  +LQ++CT+   S V+YAPVDI    +V+ 
Sbjct: 610 SLSKGQDRGNSVS------IQTVKSREKSTWVLQDNCTNSYESVVVYAPVDINTTQLVIA 663

Query: 682 GGDPDYVALLPSGFAILPDGTSLHGANIGEA-----ASGGSLLTVAFQILVDSVPTAKLS 736
           G DP  + +LP GF+I+PDG       I  A       GGSLLT+A Q LV+  P AKL+
Sbjct: 664 GHDPSNIQILPCGFSIIPDGVESRQLVISSAQEDRNTQGGSLLTLALQTLVNQSPAAKLN 723

Query: 737 LGSVATVNNLIACTVERIKASLSCE 761
           + SV +V NL++ T+  IK SL  E
Sbjct: 724 MESVESVTNLVSVTLHNIKRSLQIE 748


>gi|213950361|gb|ACJ54445.1| GL2a [Brassica rapa]
          Length = 750

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 299/685 (43%), Positives = 413/685 (60%), Gaps = 53/685 (7%)

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           YHRHT  QI+ MEA FKE PHPD+KQR++LS +LGL P QVKFWFQN+RTQ+K   ERHE
Sbjct: 100 YHRHTTDQIRHMEALFKETPHPDEKQRQQLSEQLGLAPRQVKFWFQNRRTQIKAIQERHE 159

Query: 154 NTQLRTENEKLRADNMRYREALSNA---SCPNCGGPTAIGEMSFDEHHLRLENARLREEI 210
           N+ L+ E EKLR +N   RE+ S A   SC NCG     G  S D+  L LEN +L+ E+
Sbjct: 160 NSLLKAELEKLREENKAMRESFSKANSSSCLNCG--GGGGGGSPDD--LLLENTKLKAEL 215

Query: 211 DRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISA 270
           D++ A   +        YPL            A  +   Q  +G  E+Y     L     
Sbjct: 216 DKLRAALGR------TPYPLQ-----------ASCSDDQQRRVGSLELYTGVFAL----- 253

Query: 271 PTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPT 330
               +K  I+E+A  A  EL +MA  GEPLW+ SL+    +LN DEY++ FP+       
Sbjct: 254 ----EKSRIVEIANRATLELQKMATSGEPLWLRSLETGREILNYDEYLKEFPQDQTSSFH 309

Query: 331 GFKC-EASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVA-GNYNGA 388
           G K  EASR+  +V M+   L +  MDV QW  +F+ ++S+A+T++V+  G      +GA
Sbjct: 310 GRKTIEASRDVGIVFMDAHKLAQSFMDVEQWKEMFACLISKAVTVDVIRQGEGPSRVDGA 369

Query: 389 LQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL----DN--LRPSPAVRCRR 442
           +Q+M  E Q+ +P+VPTRE Y+VR C+Q     WA+VDVS+    DN   +    +RCR+
Sbjct: 370 IQLMFGEMQLLTPVVPTREVYFVRSCRQLSPEKWAIVDVSVSMEEDNNAEKEGSLLRCRK 429

Query: 443 RPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERL 502
           RPSGC+I++  NG+SKVTWVEH+++    V  L++  V+TG AFGAK WVATL   CERL
Sbjct: 430 RPSGCIIEDTSNGHSKVTWVEHLDLSASTVQPLFRSFVNTGLAFGAKHWVATLQLHCERL 489

Query: 503 ASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVR 562
              MATN+PT +   +T   GRKS+LK+A+RM  SF   ++AS+ H W  ++     D+R
Sbjct: 490 VFFMATNVPTKDSLGVTTLAGRKSVLKMAQRMTQSFYRAIAASSYHQWNKITTKTGQDMR 549

Query: 563 VMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAH 622
           V +RK++ DPG P G+++ A++S WLPV P  +FDF RDE  R EWD LSNG  VQ +  
Sbjct: 550 VSSRKNLHDPGEPTGVIVCASSSLWLPVSPTLLFDFFRDETRRHEWDALSNGAHVQSIVS 609

Query: 623 IANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNG 682
           ++ G+D GN VS      +Q+  S + +  +LQ+SCT+   S V+YAPVDI    +V+ G
Sbjct: 610 LSKGQDRGNSVS------IQTVKSREKSTWVLQDSCTNSYESVVVYAPVDINTTQMVIAG 663

Query: 683 GDPDYVALLPSGFAILPDGTSLHGANIGEA------ASGGSLLTVAFQILVDSVPTAKLS 736
            DP  + +LP GF+I+PDG       I  A        GGSLLT+A Q LV+  P AKL+
Sbjct: 664 HDPSNIQILPCGFSIIPDGVESRQLVISSAQEADRNTQGGSLLTMALQTLVNQSPAAKLN 723

Query: 737 LGSVATVNNLIACTVERIKASLSCE 761
           + SV +V NL++ T+  IK  L  E
Sbjct: 724 MESVESVTNLVSVTLHNIKRCLQIE 748


>gi|224077468|ref|XP_002305259.1| predicted protein [Populus trichocarpa]
 gi|222848223|gb|EEE85770.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 310/706 (43%), Positives = 430/706 (60%), Gaps = 44/706 (6%)

Query: 75  NHEGASGDDQEQRPNKK----KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLE 130
           N+ GASGD+ E   N +    K YHRH+  QI ++E FFKECPHPD+ QR++LSRELGLE
Sbjct: 1   NNGGASGDEHEAASNSRNQGNKAYHRHSNQQIHQLEKFFKECPHPDENQRRQLSRELGLE 60

Query: 131 PLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIG 190
             Q+KFWFQNKRTQ K Q ER +N+ LR ENE+++ +N+   EAL N  CP CGGP   G
Sbjct: 61  AKQIKFWFQNKRTQKKAQSERADNSVLRLENERIQCENLAIIEALKNVICPACGGP-PFG 119

Query: 191 EMSFDE--HHLRLENARLREEIDR-ISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNF 247
           E         L+ ENARL+EE  + IS I +            L+P   S     + G  
Sbjct: 120 EEERQRSLQKLKQENARLKEEARKSISQIDS------------LTPGAGS-----SHGVL 162

Query: 248 GAQPGIGGGEMYGA--ADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSL 305
              PGI      G   + L+       + +K ++ E A +A +EL+R+ ++ EPLW+ S 
Sbjct: 163 TTNPGIDLERNPGLDNSQLVYKRRGILDMEKALMAETAASAADELVRLLRVNEPLWIKSP 222

Query: 306 DGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFS 365
                +++   Y + +PR    K +  + E+S+++A+VIM  + LV++ +D N+W  +F 
Sbjct: 223 SDGRYIIDRVGYEKLYPRDSHFKSSNARVESSKDSAMVIMPGMDLVDMFLDPNKWMDLFP 282

Query: 366 GIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVV 425
            IV++A T+ +L  G  GN NG+LQ+M  +  + SPLVP RE Y++R C+Q   G W + 
Sbjct: 283 TIVTKARTILLLEAGTVGNRNGSLQMMYEQMHILSPLVPPREFYFLRLCQQLEPGEWVIA 342

Query: 426 DVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG-VHNLYKQLVSTGN 484
           D+S D +R     R  R PSGC+IQ+  NG SKVTWVEHVEVDDR   H LY+ L+   +
Sbjct: 343 DISYDFMRDGSPSRAWRLPSGCMIQDKSNGCSKVTWVEHVEVDDRTQTHRLYRDLICGRS 402

Query: 485 AFGAKRWVATLDRQCERLASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVISFCAGVS 543
           A+GA+RW+A+L R CERLA          E  GVIT+ +GRKS++ LA RMV  F A + 
Sbjct: 403 AYGAERWIASLRRICERLAFYKEETAAAREFGGVITSPEGRKSIVNLAHRMVKIFFASLG 462

Query: 544 ASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDEN 603
            S    +  LS      VRV  RK+ +  G+P G+V+SAATS WLP+ P+ VF+F +DE 
Sbjct: 463 MSGKLDFPQLSEVHNSGVRVAIRKNTEQ-GQPIGMVVSAATSLWLPLSPQNVFNFFKDEK 521

Query: 604 TRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTA 663
           +R +WDILSN   V  ++HI+NG + GNC+S+           +++NMLILQESCTD + 
Sbjct: 522 SRIQWDILSNSNPVHVISHISNGTNPGNCISI-----THPFIPTENNMLILQESCTDSSG 576

Query: 664 SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG------TSLHGANIGEAASGGS 717
           S V+YAP+DI AMN+V+ G D   + +LPSGF I  DG       S    +   A SGGS
Sbjct: 577 SMVVYAPLDIPAMNMVIGGADSSIIPILPSGFVISGDGRPDTGGDSSTSTSSTGADSGGS 636

Query: 718 LLTVAFQILV---DSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
           LLTVAFQILV   +   + +L++ SVATVN LI+ TV +IKA+L+C
Sbjct: 637 LLTVAFQILVAGPNVTSSTELNMESVATVNTLISTTVLKIKAALNC 682


>gi|449529531|ref|XP_004171753.1| PREDICTED: homeobox-leucine zipper protein HDG2-like, partial
           [Cucumis sativus]
          Length = 296

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 277/305 (90%), Positives = 286/305 (93%), Gaps = 9/305 (2%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVEVDDRGVHNLYKQLVS+G AFGAKRWV TLDRQCERLAS MATNIPTG+VGVI
Sbjct: 1   VTWVEHVEVDDRGVHNLYKQLVSSGQAFGAKRWVTTLDRQCERLASAMATNIPTGDVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           TNQ+GRKSMLKLAERMVISFCAGVSAST HTWTTLSGTGADDVRVMTRKS+DDPGRP GI
Sbjct: 61  TNQEGRKSMLKLAERMVISFCAGVSASTTHTWTTLSGTGADDVRVMTRKSIDDPGRPHGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRV 638
           VLSAATSFWLPVPPKR+FDFLRDEN+RSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRV
Sbjct: 121 VLSAATSFWLPVPPKRIFDFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRV 180

Query: 639 NCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL 698
           N   SANSSQSNMLILQESCTDPTASFVIYAPVD+VAMN+VLNGGDPDYVALLPSGFAIL
Sbjct: 181 N---SANSSQSNMLILQESCTDPTASFVIYAPVDVVAMNLVLNGGDPDYVALLPSGFAIL 237

Query: 699 PDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           PDG         E  SGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL
Sbjct: 238 PDGGGG------EGVSGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 291

Query: 759 SCESA 763
           SCE+A
Sbjct: 292 SCENA 296


>gi|224134761|ref|XP_002327482.1| predicted protein [Populus trichocarpa]
 gi|222836036|gb|EEE74457.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 311/703 (44%), Positives = 432/703 (61%), Gaps = 46/703 (6%)

Query: 75  NHEGASGDDQE--QRPNK-KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
           N+ G SGD+ E     NK KK YHRHT  QI ++E FFKECPHP++KQR++LSRELGLE 
Sbjct: 1   NNGGVSGDEHEAFNSGNKGKKAYHRHTCQQILQLEKFFKECPHPNEKQRRQLSRELGLEA 60

Query: 132 LQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGG-PTAIG 190
            Q+KFWFQN+RTQ K Q ER +N+ LRTENE++  +N+  REA+ N  CP CGG P    
Sbjct: 61  KQIKFWFQNRRTQEKAQSERSDNSVLRTENERIHCENLSIREAMKNVICPACGGHPFGEE 120

Query: 191 EMSFDEHHLRLENARLREEIDRI-SAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGA 249
           E   +   LR ENARLREE   + + +  + +G P +++                   G 
Sbjct: 121 ERQLNLQKLRQENARLREEAKELPTFVQNQRMGNPGIDW-------------------GR 161

Query: 250 QPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTA 309
            P   G ++   A  L  I    + +  ++ E A  AM+ELIR+ ++ EP W+ S     
Sbjct: 162 NP---GSDISHFAYRLEGI---PDMENALMAETAAGAMDELIRLLRVNEPFWIKSPSDGR 215

Query: 310 AVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVS 369
            +L+   Y R +PR         + E+S+++A V M  + LV++ +D N+W  +F  IV+
Sbjct: 216 LILDRLSYERIYPRAAHFISRNARVESSKDSATVTMPGMDLVDMFLDPNKWVDLFPTIVT 275

Query: 370 RAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL 429
            A T+ VL  G  GN +G+LQ+M  +  + SPLVP RE Y++R C Q   G W + DVS 
Sbjct: 276 EARTIHVLEAGTVGNRHGSLQMMYEQMHILSPLVPPREFYFLRLCLQLEPGQWVIADVSY 335

Query: 430 DNLRPSPAVRCR-RRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQLVSTGNAFG 487
           D L+ S +  C  R PSGC+IQ+MPNG SK+ WVEHVE +DR   H LY+ L+    A+G
Sbjct: 336 DYLKESGSPPCAWRLPSGCMIQDMPNGCSKIIWVEHVEANDRIQTHCLYRDLICGSYAYG 395

Query: 488 AKRWVATLDRQCERLASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVISFCAGVSAST 546
           A+RW+A+L R CERLA   +T +P  E+ GV+T+ +GRKS++ LA RMV  FC+ +  S 
Sbjct: 396 AERWIASLQRICERLA--FSTAVPPRELGGVVTSPEGRKSIVNLAHRMVKIFCSSLGMSG 453

Query: 547 AHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRS 606
              +  LS      VRV   K+ +  G+P G V SAATSFWLP+ P+ VF+F + E +R+
Sbjct: 454 KLDFRQLSEGNNSGVRVAICKNAEQ-GQPIGTVASAATSFWLPLSPQNVFNFFKAEKSRT 512

Query: 607 EWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFV 666
           +WDILSNG  V E++HI+NG D GNC+S++RV      +   +NMLILQESCTD + S V
Sbjct: 513 QWDILSNGNPVLEISHISNGADPGNCISIIRV-ISHPFSPILNNMLILQESCTDSSVSMV 571

Query: 667 IYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG------TSLHGANIGEAASGGSLLT 720
           +YAPV I AMNV ++G D   + +LPSGF I  DG      TS    +   + SGGSLLT
Sbjct: 572 VYAPVGIPAMNVAISGDDSSIIPILPSGFVISGDGRMDTRGTSSSSTSSTGSNSGGSLLT 631

Query: 721 VAFQILV---DSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
           +AFQILV   +S  + + ++ SVATVN LI+ TV +IK++ +C
Sbjct: 632 IAFQILVSGSNSSSSTEFNMESVATVNTLISTTVLKIKSAFNC 674


>gi|357131009|ref|XP_003567136.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           ROC9-like [Brachypodium distachyon]
          Length = 758

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 297/703 (42%), Positives = 409/703 (58%), Gaps = 56/703 (7%)

Query: 89  NKKKR----YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           NKKKR    YHRHT  Q++ MEA FKE PHPD+KQR++LS +LGL P QVKFWFQN+RTQ
Sbjct: 80  NKKKRSRKSYHRHTAEQVRVMEAVFKESPHPDEKQRQQLSEQLGLSPRQVKFWFQNRRTQ 139

Query: 145 MKTQHERHENTQLRTENEKLRADNMRYRE-ALSNASCPNCGGPTAIGE------MSFDEH 197
           +K   ERHEN+ L++E E ++ +N   RE A   + C NCG   A  +       +  E 
Sbjct: 140 IKAIQERHENSLLKSELENVQKENRAMRELARRPSRCANCGVEAASSDDVDPAAAARQEE 199

Query: 198 HLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGE 257
            L+LENARL+ EI+++ A      GK V    + SP   +  + L   +       GGG 
Sbjct: 200 QLQLENARLKAEIEKLRATX----GKAVSTDGVASPAFSAGTVLLQTNSRNPVEDYGGG- 254

Query: 258 MYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEY 317
                         T  DK  I+ELA  A+EEL  M   GEPLW+ SL+    +LN DEY
Sbjct: 255 -------------LTGHDKQSILELAGRALEELTTMCSSGEPLWVRSLETGRDILNYDEY 301

Query: 318 VRTFPR---GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTL 374
           +R F R   G G +  G+  EASRE+ VV ++   LV   MDVNQW  +F  ++++A TL
Sbjct: 302 LRLFGRDDDGSGDQRAGWSVEASRESGVVYIDATQLVHAFMDVNQWKELFLPMIAKASTL 361

Query: 375 EVLSTG---VAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN 431
           +V+ TG        +G +Q+M AE Q+ +P+VPTRE Y+ RYCK+     WA VDVS D 
Sbjct: 362 DVIRTGENDDDDGPDGVVQLMFAEVQMLTPMVPTRELYFARYCKKLAAEKWATVDVSFDK 421

Query: 432 -----LRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEV-DDRGVHNLYKQLVSTGNA 485
                + PSP  RC + PSGC+I+E  NG+S+VTWVEH    +  G  ++Y+ + ++G A
Sbjct: 422 ADAGGMDPSPPARCWKNPSGCIIEEQTNGHSRVTWVEHTRRPESAGAPSMYRAVTASGLA 481

Query: 486 FGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSAS 545
           FGA+RW+ATL  QCER+   +ATN+PT +   ++   GR+S+LKLA RM  S C  +  S
Sbjct: 482 FGARRWLATLQLQCERMVFSVATNVPTRDSNGVSTLAGRRSVLKLAHRMTASLCRSIGGS 541

Query: 546 TAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
               W+ ++  GA D+RV +R+S    G P G+++ A  S WLPV P  + DF+RDE+ R
Sbjct: 542 RGLAWSRVTRAGAGDIRVTSRRSAG--GEPQGLIVCAVLSTWLPVSPTALLDFVRDESRR 599

Query: 606 SEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQE-SCTDPTAS 664
            EWD   +GG VQ   ++A G+D GNC +        SA +      I+Q+ SCT    +
Sbjct: 600 PEWDATLSGGTVQRRVNLAKGKDRGNCAA------SSSAGAQHGGKWIVQDSSCTSSCEA 653

Query: 665 FVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAAS------GGSL 718
            V YAPVD   +  V++G D   VA+LP GFA++PDG       +  ++S       GSL
Sbjct: 654 IVAYAPVDAAVLQPVISGHDSSGVAVLPCGFAVVPDGLEYSRPAVITSSSRKGDVAAGSL 713

Query: 719 LTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
           +TVAFQ+L  S  TA LS  S  TV  L++CT+  IK +L CE
Sbjct: 714 VTVAFQVLASSSLTATLSPDSAETVIGLVSCTLRDIKKALGCE 756


>gi|356558073|ref|XP_003547333.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 713

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 278/708 (39%), Positives = 421/708 (59%), Gaps = 32/708 (4%)

Query: 78  GASGDDQEQRPNKKKR--YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVK 135
           G SGD+     N+ +R  Y R T  Q   +E F K+CPHPD+ QR++L+ E+GLE  QVK
Sbjct: 9   GGSGDEGSDNFNQGRRPSYKRLTSAQTARLERFIKDCPHPDEAQRRQLASEIGLETKQVK 68

Query: 136 FWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFD 195
           FWFQNKRTQ+K QHER +NT LR EN+++ + N+  ++AL N  CP+CGG     +    
Sbjct: 69  FWFQNKRTQIKNQHERADNTALRVENDRIHSKNLLMKKALKNMLCPSCGGAPCQDDREHL 128

Query: 196 EHHLRLENARLREEIDRISAIAAKYVGK--------PVVNYPLL-----SPPVPSRPLEL 242
              ++ EN+RL+EE +++S++ A+Y+ K         V N P++     +P + +  L  
Sbjct: 129 MQKMQHENSRLKEEHEKVSSLLARYLEKQMSPPEFQQVFNIPIIGSSSHAPKLENSSLNY 188

Query: 243 AVGNFGAQ-PGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLW 301
            +G   +  P + G ++    D   ++      +K +++++A +AMEEL+R+ ++ EP W
Sbjct: 189 EIGGSSSHGPSLYGMQIMDGHD--HNLMGSEGIEKTLMLKVAASAMEELVRLIRINEPCW 246

Query: 302 M-TSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQW 360
           + +S      +L  + Y + FPR    K    + EA++++ +V +N I LV++ +D ++W
Sbjct: 247 IKSSTQDGQLILQHENYEKMFPRTNNFKGVNLRVEATKDSGIVSINSIQLVDMFLDSDKW 306

Query: 361 STVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEG 420
             +F  IV++A T++VL  G+ G+ +GALQ+M  +  V SPLV  RE  ++RYC+Q  EG
Sbjct: 307 INLFPTIVTKAKTIKVLENGLVGSRSGALQLMFEQMHVLSPLVQPREFQFLRYCEQIEEG 366

Query: 421 TWAVVDVSLDNLRPSPA-VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQ 478
            W + DVS D+ R   +     R PSGC+IQEMPNG S VTWVEHVEVDD+   H LYK 
Sbjct: 367 VWVIADVSFDSFRQKTSFFHSWRHPSGCMIQEMPNGCSMVTWVEHVEVDDKIQTHQLYKD 426

Query: 479 LVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVIS 537
           L+ TG A+G +RW+  L R  ER A      IP  +  GVI + +GR+S++    RM+  
Sbjct: 427 LIGTGIAYGTERWIMELQRIGERFACFYVERIPIQDSGGVINSLEGRRSVMNFCHRMIKV 486

Query: 538 FCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFD 597
           FC  ++ S    +  L       VRV  RK+ +  G+P G+++ AATS WLP+   +VF+
Sbjct: 487 FCESLTMSGNLDFPLLKMENNSGVRVSIRKNRNHLGQPKGVIVVAATSIWLPLHYMKVFE 546

Query: 598 FLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQES 657
           FL D+  R++WD+L  G    ++AHI+NG   GNC+S+ R         S++N LILQES
Sbjct: 547 FLTDDRRRAQWDVLCCGNNANKVAHISNGIHPGNCISISR-----PFIPSENNALILQES 601

Query: 658 CTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG---TSLHGANIGEAAS 714
            T P  S+V+YAP D+ +M   +NG D   + +LPSGF I  DG    +L   N  +   
Sbjct: 602 FTTPMGSYVVYAPTDVASMISAINGEDSSMLPVLPSGFVISADGEPNAALEAFNSSDIER 661

Query: 715 -GGSLLTVAFQILVDSVPTAKL-SLGSVATVNNLIACTVERIKASLSC 760
            GGSLLTVAFQIL  S     + ++ SVA VN+L+  T+ ++K +L+C
Sbjct: 662 LGGSLLTVAFQILASSPDGINMPNMESVAAVNSLLTSTILKVKDALNC 709


>gi|326531178|dbj|BAK04940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 264/459 (57%), Positives = 334/459 (72%), Gaps = 20/459 (4%)

Query: 315 DEYVRTFPRGIGPKPTGFKCEASRETAVVIM-NHISLVEILMDVNQWSTVFSGIVSRAMT 373
           +EY+ +    IG KP GF  EASRE+ +VI+ N ++LVE LMD  +WS +FS ++++A  
Sbjct: 1   EEYLHSSQHCIGMKPAGFVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATI 60

Query: 374 LEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL- 432
           LE +S G+ G  NGAL +M AE QV SPLVP RE  ++R+CKQ  EG WAVVDVS+D L 
Sbjct: 61  LEEVSNGIGGTRNGALLLMKAELQVLSPLVPIREVIFLRFCKQLAEGAWAVVDVSIDGLL 120

Query: 433 --------RPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGN 484
                        ++CRR PSGC++Q+ PNGY KVTWVEH E D+  VH  Y+ L+ +G 
Sbjct: 121 SNQNSATTSAGANLKCRRLPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQFYRPLLRSGL 180

Query: 485 AFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSA 544
           AFGA RW+ATL RQCE LA +M++   +       +Q+GR+SMLKLA RM  +FCAGVSA
Sbjct: 181 AFGASRWLATLQRQCECLAILMSSATASPNEQTAISQEGRRSMLKLARRMTENFCAGVSA 240

Query: 545 STAHTWTTLSG-TGA--DDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRD 601
           S+A  W+ L G TG+  +DVRVM RKSV +PG PPG+VLSAATS W+P+ P+++FDFLRD
Sbjct: 241 SSAREWSKLDGATGSIGEDVRVMARKSVSEPGEPPGVVLSAATSVWVPIAPEKLFDFLRD 300

Query: 602 ENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDP 661
           E  R+EWDILSNGG +QEMA IA G   GN VSLLR + + SAN  QS+MLILQE+CTD 
Sbjct: 301 EQLRAEWDILSNGGPMQEMARIAKGHQNGNSVSLLRASAM-SAN--QSSMLILQETCTDA 357

Query: 662 TASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTV 721
           + S V+YAPVDI AM +V+NGGD  YVALLPSGFAILPDG S+      E  +GGSLLTV
Sbjct: 358 SGSIVVYAPVDIPAMQLVMNGGDSTYVALLPSGFAILPDGPSIG----SEHKTGGSLLTV 413

Query: 722 AFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
           AFQILV+S PTAKL++ SV TVNNLI+CT+++IK +L C
Sbjct: 414 AFQILVNSQPTAKLTVESVETVNNLISCTIKKIKTALQC 452


>gi|356532435|ref|XP_003534778.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 714

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 288/720 (40%), Positives = 425/720 (59%), Gaps = 55/720 (7%)

Query: 78  GASGDD---QEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 134
           G SGD+   Q +RP+    Y R +  Q   +E F K+CPHPD+ QR++L+ E+GLE  Q+
Sbjct: 9   GGSGDEGSHQGRRPS----YKRLSSAQTARLERFIKDCPHPDEAQRRQLASEIGLETKQI 64

Query: 135 KFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSF 194
           KFWFQNKRTQ+K QHER +NT LR EN+++  +N+  +EAL N  C +CGG     E   
Sbjct: 65  KFWFQNKRTQIKNQHERADNTALRVENDRIHTENLLMKEALKNMLCSSCGGAPCQEE--- 121

Query: 195 DEHH----LRLENARLREEIDRISAIAAKYVGKPV---------VNYPLLSPPVPSRPLE 241
           D  H    ++LENA+L+EE +++S++ A+Y+ K +          N P++     +  LE
Sbjct: 122 DHEHAIQNMQLENAQLKEEHEKVSSLLARYLEKQMSPPELQQQAFNIPIIGSSSHAPELE 181

Query: 242 LAVGNF--GAQPGIGGGEMYGAA-------DLLRSISAPTEADKPMIIELAVAAMEELIR 292
            +  N+  G      G   YG         +LLRS       +K ++ ++A AAM EL+R
Sbjct: 182 NSSINYEIGGSSSSHGPSRYGMQIMVSDDHNLLRS----EGIEKALMFKVAAAAMNELVR 237

Query: 293 MAQMGEPLWMTS--LDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISL 350
           + ++ EPLW  S   DG   +L  + Y + FPR    K    + EA++E+ +V +N I L
Sbjct: 238 LIRINEPLWTKSSTQDGK-PILQHENYEKIFPRTNSFKGANLRVEATKESGIVSINSIQL 296

Query: 351 VEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYY 410
           +++ +D ++W  +F  IV++A T++V+  G+ G+ +GALQ+M  +  V SPLV  RE  +
Sbjct: 297 IDMFLDPDKWVNLFPTIVTKAETMKVIENGLVGSRSGALQLMFEQMHVLSPLVQPREFQF 356

Query: 411 VRYCKQHGEGTWAVVDVSLDNLRPSPA-VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 469
           +RYC+Q  EG W + DVS D+ R   +     R PSGC+IQEMPNG S VTWVEHVEVDD
Sbjct: 357 LRYCQQIEEGVWVIADVSFDSFRQKTSFFHSWRHPSGCMIQEMPNGCSMVTWVEHVEVDD 416

Query: 470 R-GVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEV-GVITNQDGRKSM 527
           +   H LYK L++TG A+GA+RW+  L R CER A      IP+ +  GVI + +GR+S+
Sbjct: 417 KIQTHQLYKDLIATGIAYGAERWIMELQRICERFACFYVERIPSQDSGGVINSLEGRRSV 476

Query: 528 LKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFW 587
           +  + RM+  FC  ++ S    +  ++      +RV  RK+ +  G+P G+++ AATS W
Sbjct: 477 MNFSHRMIKVFCESLTMSGNLDFPHMNMENNSGLRVSIRKNRNHLGQPKGMIVVAATSIW 536

Query: 588 LPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSS 647
           LP+   +VF+F  D+  R++WD+L  G    ++AHI+N    GNC+S+ RV      N  
Sbjct: 537 LPLHYMKVFEFFTDDRRRAQWDVLCFGNDANKVAHISNEIHPGNCISIYRVINFNHEN-- 594

Query: 648 QSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGA 707
             N L+LQES T P  S+V+YAP D+ AMN  +NG D   + +LPSGF I  DG     A
Sbjct: 595 --NALVLQESFTTPMGSYVVYAPTDVAAMNSAINGEDSSMLPVLPSGFVISADGEP--NA 650

Query: 708 NIGEAAS------GGSLLTVAFQILVDSVPTAKLS-LGSVATVNNLIACTVERIKASLSC 760
            +G   S      GGSLLTVAFQIL  S     +S + SV  VN+L+  T+ ++K +L+C
Sbjct: 651 ALGAFNSSDIERLGGSLLTVAFQILASSPDGINMSNMESVEAVNSLLTSTILKVKDALNC 710


>gi|9759430|dbj|BAB10227.1| homeobox protein [Arabidopsis thaliana]
          Length = 783

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 293/748 (39%), Positives = 439/748 (58%), Gaps = 88/748 (11%)

Query: 48  DMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEA 107
           +M +N S         E+ +  K G+E+      DD++  P KKKRYHRHT  QIQEMEA
Sbjct: 69  EMMENGSAGGSFGSGSEQAEDPKFGNESDVNELHDDEQPPPAKKKRYHRHTNRQIQEMEA 128

Query: 108 FFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRAD 167
            FKE PHPDDKQRK LS ELGL+P QVKFWFQN+RTQMK Q +R+EN  LR EN+ L+++
Sbjct: 129 LFKENPHPDDKQRKRLSAELGLKPRQVKFWFQNRRTQMKAQQDRNENVMLRAENDNLKSE 188

Query: 168 NMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVN 227
           N   +  L   SCP+CGGPT +G++ F+E H  +EN RLREE+DR+  IA++Y G+P+ +
Sbjct: 189 NCHLQAELRCLSCPSCGGPTVLGDIPFNEIH--IENCRLREELDRLCCIASRYTGRPMQS 246

Query: 228 YPLLSPPV----------PSRPLELAV--GNFGAQ--------PGIGGGEMY---GAADL 264
            P   P +          PS  L+++V  GNF  Q        P       +    A + 
Sbjct: 247 MPPSQPLINPSPMLPHHQPSLELDMSVYAGNFPEQSCTDMMMLPPQDTACFFPDQTANNN 306

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMT----SLDGTAAVLNEDEYVRT 320
             +     + +K + +E AV+ ++EL +M    EPLW+      + G    LNE+EY+R 
Sbjct: 307 NNNNMLLADEEKVIAMEFAVSCVQELTKMCDTEEPLWIKKKSDKIGGEILCLNEEEYMRL 366

Query: 321 FPRGIGPKPT--GFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLS 378
           FP  +  +     F  EAS+  AVVIMN I+LV+  ++ ++WS +F  IV+RA T++++S
Sbjct: 367 FPWPMENQNNKGDFLREASKANAVVIMNSITLVDAFLNADKWSEMFCSIVARAKTVQIIS 426

Query: 379 TGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGE-GTWAVVDVSLDN----LR 433
           +GV+G     L V++           TRE+Y++RY +Q+ E G WA+VD  +D+    ++
Sbjct: 427 SGVSGASGSLLLVLSPLVP-------TREAYFLRYVEQNAETGNWAIVDFPIDSFHDQMQ 479

Query: 434 PSPAV--RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRW 491
           P   +    +R+PSGC+IQ+MPNGYS+V WVEHVEVD++ VH  + + V +G AFGA RW
Sbjct: 480 PMNTITHEYKRKPSGCIIQDMPNGYSQVKWVEHVEVDEKHVHETFAEYVKSGMAFGANRW 539

Query: 492 VATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWT 551
           +  L RQCER+AS+MA NI   ++G     + R+++++L++R+V +FC  +S +   +WT
Sbjct: 540 LDVLQRQCERIASLMARNI--TDLG-----EARRNIMRLSQRLVKTFCVNISTAYGQSWT 592

Query: 552 TLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDIL 611
            LS T  D VR+ TRK   +PG+P G+VL A ++ WLP    +VFD +RD++ +S     
Sbjct: 593 ALSETTKDTVRITTRKMC-EPGQPTGVVLCAVSTTWLPFSHHQVFDLIRDQHHQS----- 646

Query: 612 SNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPV 671
                                        L ++NS  +  L+LQESC D + S ++Y+ V
Sbjct: 647 -----------------------------LVASNSWHNVELMLQESCIDNSGSLIVYSTV 677

Query: 672 DIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVP 731
           D+ ++   +NG D   + +LP GF+I+P      G ++   +    LLTV  Q+L  +VP
Sbjct: 678 DVDSIQQAMNGEDSSNIPILPLGFSIVPVNPP-EGISVNSHSPPSCLLTVGIQVLASNVP 736

Query: 732 TAKLSLGSVATVNNLIACTVERIKASLS 759
           TAK +L +V T+NN +  TV +I ++LS
Sbjct: 737 TAKPNLSTVTTINNHLCATVNQITSALS 764


>gi|449519629|ref|XP_004166837.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Cucumis
           sativus]
          Length = 738

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 291/742 (39%), Positives = 422/742 (56%), Gaps = 59/742 (7%)

Query: 42  GQLHPLDMTQNTSESEIARLREEEFDSTK-SGSENHE--GASGDDQEQ---RPNKKKRYH 95
           G   P+D+  +T+     R  +   D+++ +GS + E  G   DD+++   + N KKR +
Sbjct: 32  GNAAPMDVEADTT----GRREDSCSDNSEPAGSRSAEDLGVDPDDEDEDKLQGNTKKRKN 87

Query: 96  RHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENT 155
           RHT  QI+EME  FKE PHPD+KQR++LS +LGL   Q+KFWFQN+RTQ+K  HERHEN 
Sbjct: 88  RHTSEQIREMEMLFKESPHPDEKQRQQLSEKLGLSCKQIKFWFQNRRTQIKAIHERHENA 147

Query: 156 QLRTENEKLRADNMRYREALSNASCPN--CGGPTAIGEMSF-----DEHHLRLENARLRE 208
            L+ E EKLR +N   RE +S +SC    C   T   +  F      +  L  E ARL+ 
Sbjct: 148 LLKGEMEKLREENQAMREMISKSSCTKGCCSASTNSLDAIFTTSDQQQQQLVTEIARLKA 207

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSP-PVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
           E++R+     KY      N         P R LE +   FG + G               
Sbjct: 208 EVERLRTALDKYAPAGTENNKEEGGIERPGRNLEKSKSIFGLEKG--------------- 252

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
                      ++ +   A+EE+++M    EPLW+ S++    +LN D Y++     +G 
Sbjct: 253 ----------RVMLIGKRAIEEVVKMGDSDEPLWVRSVETGRELLNYDVYMKEL--AVGN 300

Query: 328 KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNG 387
           +    + EASRET VV  +   LV+  MDV QW  +F  ++S+A T+EV+  G   N +G
Sbjct: 301 ERGKREVEASRETGVVFADLHRLVQSFMDVVQWKEMFPSMISKASTMEVVFNGDGNNRDG 360

Query: 388 ALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL---RPSPAVRCRRRP 444
           A+Q+M AE Q+ +P +P RE +++R CKQ   G W V DVS+D +     S + RCR+RP
Sbjct: 361 AVQLMFAELQMLTPTIPPREIFFIRSCKQLSPGKWVVADVSIDKVGDHVDSSSSRCRKRP 420

Query: 445 SGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLAS 504
           SGC+IQ+  +G+ KVTWVEH E    G+H +Y+ +V++G  FGA  W++TL   CE    
Sbjct: 421 SGCIIQDQSDGHCKVTWVEHWECHKIGLHTIYRTIVNSGLIFGATHWMSTLQMHCEWQVF 480

Query: 505 VMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVM 564
            MATN+P  +   IT   GRKS+L+LA+RM  S    + AS +HTWT +     + +R+ 
Sbjct: 481 FMATNVPMKDSTGITTVGGRKSVLRLAQRMTSSIYQAIGASNSHTWTKVQSKIGETIRIA 540

Query: 565 TRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIA 624
           +RK++ +P  P G++L A  S WLPV PK +F+FL DE  R EWD++ +GG  + +A+ A
Sbjct: 541 SRKNLKNPHEPTGLILCAVASIWLPVSPKLLFEFLIDEARRPEWDVMLSGGQAEMLANFA 600

Query: 625 NGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGD 684
            G++ GN V+      +Q+  S ++N  ILQ+S T+   S V+YA VD+  M  V+ G D
Sbjct: 601 KGQNRGNAVT------IQAVKSDETNKWILQDSLTNEYESTVVYAQVDMNGMKSVMAGFD 654

Query: 685 PDYVALLPSGFAILPDGTSLHGANIGEAAS-----GGSLLTVAFQILVDSVPTAKLSLGS 739
              +  LP+GF+ILPDG       I  +       GGSLLTVA QILV   PTA+ +  S
Sbjct: 655 SGNITTLPTGFSILPDGHPTRPLVISSSKEERETRGGSLLTVASQILVSPSPTAETTSQS 714

Query: 740 VATVNNLIACTVERIKASLSCE 761
           V  VNN+++ T+E IKASL  E
Sbjct: 715 VEYVNNIMSHTLENIKASLQGE 736


>gi|30684155|ref|NP_193506.2| homeobox-leucine zipper protein HDG4 [Arabidopsis thaliana]
 gi|75329764|sp|Q8L7H4.1|HDG4_ARATH RecName: Full=Homeobox-leucine zipper protein HDG4; AltName:
           Full=HD-ZIP protein HDG4; AltName: Full=Homeodomain
           GLABRA 2-like protein 4; AltName: Full=Homeodomain
           transcription factor HDG4; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 4
 gi|22136630|gb|AAM91634.1| putative GLABRA2 protein [Arabidopsis thaliana]
 gi|332658537|gb|AEE83937.1| homeobox-leucine zipper protein HDG4 [Arabidopsis thaliana]
          Length = 709

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 288/691 (41%), Positives = 412/691 (59%), Gaps = 67/691 (9%)

Query: 76  HEGASGDDQEQRP--NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
           H+       EQ P   KKKRYHRHT  QIQ+MEA FKE  HPD K R  LS++LGL P+Q
Sbjct: 72  HDPVENTAIEQEPPAAKKKRYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKLGLSPIQ 131

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMS 193
           VKFWFQNKRTQ+K Q  R +N +L+ ENE L+ ++   +       C  CG         
Sbjct: 132 VKFWFQNKRTQIKAQQSRSDNAKLKAENETLKTESQNIQSNFQCLFCSTCG--------- 182

Query: 194 FDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGI 253
              H+LRLENARLR+E+DR+ +I +            +  P PS+ +             
Sbjct: 183 ---HNLRLENARLRQELDRLRSIVS------------MRNPSPSQEITPETNKNN----- 222

Query: 254 GGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLW-MTSLDGTAAVL 312
               M  A           E +K + +ELAV+   EL +M  + EPLW    LD  +  L
Sbjct: 223 -NDNMLIA-----------EEEKAIDMELAVSCARELAKMCDINEPLWNKKRLDNESVCL 270

Query: 313 NEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAM 372
           NE+EY + F   +      F+ EASR  AV+++N I+LV+  +D ++WS +F  IVS A 
Sbjct: 271 NEEEYKKMFLWPLMNDDDRFRREASRANAVIMLNCITLVKAFLDADKWSEMFFPIVSSAK 330

Query: 373 TLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGE-GTWAVVDVSLDN 431
           T +++S+G +G  +G L +M AE QV SPLVPTRE+Y++RY +Q+ E G W VVD  +D 
Sbjct: 331 TAQIISSGASGP-SGTLLLMFAELQVVSPLVPTREAYFLRYVEQNAEEGKWMVVDFPIDR 389

Query: 432 LRPSPAV---RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHN-LYKQLVSTGNAFG 487
           ++P+ A    + RR+PSGC+IQ M NGYS+VTWVEHVEV+++ V + + ++ V +G AFG
Sbjct: 390 IKPASATTTDQYRRKPSGCIIQAMRNGYSQVTWVEHVEVEEKHVQDEVVREFVESGVAFG 449

Query: 488 AKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTA 547
           A+RW++ L RQCER+AS+MATNI   ++GVI + + RK+++KL++RMV +FC  +  S  
Sbjct: 450 AERWLSVLKRQCERMASLMATNI--TDLGVIPSVEARKNLMKLSQRMVKTFCLNIINSHG 507

Query: 548 HTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSE 607
              T       D V++++RK         G+V  A +   LP   ++VFD LRD    S+
Sbjct: 508 QAPT------KDTVKIVSRKVCG------GLVPCAVSVTLLPYSHQQVFDLLRDNQRLSQ 555

Query: 608 WDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVI 667
            +IL  G   QE+AHIANG   GN +SLLR+N    +NSS +  L+LQE+CTD + S ++
Sbjct: 556 LEILFMGSSFQEVAHIANGSHLGNSISLLRINV--ESNSSHNVELMLQETCTDNSGSLLV 613

Query: 668 YAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILV 727
           Y+ VD VA+ + +NG DP  + LLP GF+++P   S  G      +S   LLTVA Q+L 
Sbjct: 614 YSTVDPVAVQLAMNGEDPSEIPLLPVGFSVVPVNPS-DGVEGSSVSSPSCLLTVAIQVLG 672

Query: 728 DSVPTAKLSLGSVATVNNLIACTVERIKASL 758
            +V T +L L +V+ +N+ I  TV RI ++L
Sbjct: 673 SNVTTERLDLSTVSVINHRICATVNRITSAL 703


>gi|449448174|ref|XP_004141841.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Cucumis
           sativus]
          Length = 738

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 290/742 (39%), Positives = 421/742 (56%), Gaps = 59/742 (7%)

Query: 42  GQLHPLDMTQNTSESEIARLREEEFDSTK-SGSENHE--GASGDDQEQ---RPNKKKRYH 95
           G   P+D+  +T+     R  +   D+++ +GS + E  G   DD+++   + N KKR +
Sbjct: 32  GNAAPMDVEADTT----GRREDSCSDNSEPAGSRSAEDLGVDPDDEDEDKLQGNTKKRKN 87

Query: 96  RHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENT 155
           RHT  QI+EME  FKE PHPD+KQR++LS +LGL   Q+KFWFQN+RTQ+K  HERHEN 
Sbjct: 88  RHTSEQIREMEMLFKESPHPDEKQRQQLSEKLGLSCKQIKFWFQNRRTQIKAIHERHENA 147

Query: 156 QLRTENEKLRADNMRYREALSNASCPN--CGGPTAIGEMSF-----DEHHLRLENARLRE 208
            L+ E EKLR +N   RE +S +SC    C   T   +  F      +  L  E ARL+ 
Sbjct: 148 LLKGEMEKLREENQAMREMISKSSCTKGCCSASTNSLDAIFTTSDQQQQQLVTEIARLKA 207

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSP-PVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
           E++R+     KY      N         P R LE +   FG + G               
Sbjct: 208 EVERLRTALDKYAPAGTENNKEEGGIERPGRNLEKSKSIFGLEKG--------------- 252

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
                      ++ +   A+EE+++M    EPLW+ S++    +LN D Y++     +G 
Sbjct: 253 ----------RVMLIGKRAIEEVVKMGDSDEPLWVRSVETGRELLNYDVYMKEL--AVGN 300

Query: 328 KPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNG 387
           +    + EASRET VV  +   LV+  MDV QW  +F  ++S+A T+EV+  G   N +G
Sbjct: 301 ERGKREVEASRETGVVFADLHRLVQSFMDVVQWKEMFPSMISKASTMEVVFNGDGNNRDG 360

Query: 388 ALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL---RPSPAVRCRRRP 444
           A+Q+M AE Q+ +P +P RE +++R CKQ   G W V DVS+D +     S + RCR+RP
Sbjct: 361 AVQLMFAELQMLTPTIPPREIFFIRSCKQLSPGKWVVADVSIDKVGDHVDSSSSRCRKRP 420

Query: 445 SGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLAS 504
           SGC+IQ+  +G+ KVTWVEH E    G+H +Y+ +V++G  FGA  W++TL   CE    
Sbjct: 421 SGCIIQDQSDGHCKVTWVEHWECHKIGLHTIYRTIVNSGLIFGATHWMSTLQMHCEWQVF 480

Query: 505 VMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVM 564
            MATN+P  +   IT   GRKS+L+LA+RM  S    + AS +HTWT +     + +R+ 
Sbjct: 481 FMATNVPMKDSTGITTVGGRKSVLRLAQRMTSSIYQAIGASNSHTWTKVQSKIGETIRIA 540

Query: 565 TRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIA 624
           +RK++ +P  P G++L A  S WLPV PK +F+FL DE  R EWD++ + G  + +A+ A
Sbjct: 541 SRKNLKNPHEPTGLILCAVASIWLPVSPKLLFEFLIDEARRPEWDVMLSSGQAEMLANFA 600

Query: 625 NGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGD 684
            G++ GN V+      +Q+  S ++N  ILQ+S T+   S V+YA VD+  M  V+ G D
Sbjct: 601 KGQNRGNAVT------IQAVKSDETNKWILQDSLTNEYESTVVYAQVDMNGMKSVMAGFD 654

Query: 685 PDYVALLPSGFAILPDGTSLHGANIGEAAS-----GGSLLTVAFQILVDSVPTAKLSLGS 739
              +  LP+GF+ILPDG       I  +       GGSLLTVA QILV   PTA+ +  S
Sbjct: 655 SGNITTLPTGFSILPDGHPTRPLVISSSKEERETRGGSLLTVASQILVSPSPTAETTSQS 714

Query: 740 VATVNNLIACTVERIKASLSCE 761
           V  VNN+++ T+E IKASL  E
Sbjct: 715 VEYVNNIMSHTLENIKASLQGE 736


>gi|30678803|ref|NP_186976.2| homeobox-leucine zipper protein HDG8 [Arabidopsis thaliana]
 gi|187471152|sp|Q9M9P4.2|HDG8_ARATH RecName: Full=Homeobox-leucine zipper protein HDG8; AltName:
           Full=HD-ZIP protein HDG8; AltName: Full=Homeodomain
           GLABRA 2-like protein 8; AltName: Full=Homeodomain
           transcription factor HDG8; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 8
 gi|332640397|gb|AEE73918.1| homeobox-leucine zipper protein HDG8 [Arabidopsis thaliana]
          Length = 699

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 287/720 (39%), Positives = 408/720 (56%), Gaps = 49/720 (6%)

Query: 66  FDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
            D+   GS  +E  +  D +Q  N K+  HRHT  QIQ +EA+FKECPHPD++QR +L R
Sbjct: 1   MDNNGGGSSGNEQYTSGDAKQ--NGKRTCHRHTPQQIQRLEAYFKECPHPDERQRNQLCR 58

Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGG 185
           EL LEP Q+KFWFQNKRTQ KTQ +R  N  LR ENE L++DN    +AL +  CP CGG
Sbjct: 59  ELKLEPDQIKFWFQNKRTQSKTQEDRSTNVLLRGENETLQSDNEAMLDALKSVLCPACGG 118

Query: 186 -PTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYV-GKPVVNYPLLSPPVPSRPLELA 243
            P    E   +   LR ENARL++  DRIS    ++   +P V   L   P   R     
Sbjct: 119 PPFGREERGHNLQKLRFENARLKDHRDRISNFVDQHKPNEPTVEDSLAYVPSLDR----- 173

Query: 244 VGNFGAQPGIGGGEMYGAADLL----RSISAP---TEADKPMIIELAVAAMEELIRMAQM 296
                   GI GG MY  +         I  P    E D  ++ E+A +A+EEL R+   
Sbjct: 174 -----ISYGINGGNMYEPSSSYGPPNFQIIQPRPLAETDMSLLSEIAASAVEELKRLFLA 228

Query: 297 GEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP-KPTGFKCEASRETAVVIMNHISLVEILM 355
            E  W+ S      V++ + Y R F   +     T    E+S+   VV +  I+L+++ +
Sbjct: 229 EEQFWVKSCIDETYVIDTESYER-FSHAVKHFSSTTAHVESSKAVTVVHVEAINLIQMFL 287

Query: 356 DVNQWSTVFSGIVSRAMTLEVLSTG--VAGNYNGALQVMTAEFQVPSPLVPTRESYYVRY 413
           D  +W  +F  IV++A T+ VL +G  + GN N  LQVM  +  + SPLVP RE   VR 
Sbjct: 288 DPEKWKELFPTIVNKANTIHVLGSGLPIRGNCN-VLQVMWEQLHILSPLVPAREFMVVRC 346

Query: 414 CKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GV 472
           C++  +G W + DVS           C +RPSGCLIQ +P+ +SKV W+EHVEVD +   
Sbjct: 347 CQEIEKGIWIIADVSHRANFDFGNAACYKRPSGCLIQALPDAHSKVMWIEHVEVDHKLDT 406

Query: 473 HNLYKQLVSTGNAFGAKRWVATLDRQCERLA-SVMATNIPTGEVGVITNQDGRKSMLKLA 531
           H +Y+ L+S G+ +GAKRW+ TL+R CER+A S + T  P+    VIT  + R+S++KL 
Sbjct: 407 HKIYRDLLSGGSGYGAKRWIVTLERMCERMALSSIQTLPPSDRSEVITTGEARRSVMKLG 466

Query: 532 ERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVP 591
           ERMV +F   ++ S    +   S  G   VRV  R ++ + G+PPGIV+SA++S  +P+ 
Sbjct: 467 ERMVKNFNEMLTMSGKIDFPQQSKNG---VRVSIRMNI-EAGQPPGIVVSASSSLAIPLT 522

Query: 592 PKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSAN------ 645
           P +VF FL++ +TR +WDILS G VV E+A I  G    NCV++LRV+     N      
Sbjct: 523 PLQVFAFLQNLDTRQQWDILSYGTVVNEIARIVTGSSETNCVTILRVHPTHEENNDKMVV 582

Query: 646 --SSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGG-DPDYVALLPSGFAILPDGT 702
             S + +ML+LQ+   D     ++YAP+D+  M+  ++G  DP ++ +LPSGF I  DG 
Sbjct: 583 QDSCKDDMLMLQDCYMDALGGMIVYAPMDMATMHFAVSGEVDPSHIPILPSGFVISSDGR 642

Query: 703 SLHGANIGEAASGGSLLTVAFQILVDSVP--TAKLSLGSVATVNNLIACTVERIKASLSC 760
                       GG+LLTVAFQILV      + +++  SV TV+ LI+ T++RIK  L+C
Sbjct: 643 R------STVEDGGTLLTVAFQILVSGKANRSREVNEKSVDTVSALISSTIQRIKGLLNC 696


>gi|1208940|gb|AAC37514.1| homeodomain protein 1 [Helianthus annuus]
          Length = 682

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 255/615 (41%), Positives = 369/615 (60%), Gaps = 48/615 (7%)

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           YHRHT  QI+EMEA FKE PHPD+KQR++LS+ LGL P QVKFWFQN+RTQ+KT  ERHE
Sbjct: 99  YHRHTADQIREMEALFKESPHPDEKQRQQLSKRLGLHPRQVKFWFQNRRTQIKTIQERHE 158

Query: 154 NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMS--FDEHHLRLENARLREEID 211
           N+ L++E +KL  +N   RE +   +C NCG  ++  ++    DE  LR+ENA+LR EI+
Sbjct: 159 NSLLKSELDKLGEENKLLRETIKKGTCTNCGFGSSSKDVHTYVDEQQLRVENAKLRAEIE 218

Query: 212 RISAIAAKYVGKPVVNYPLLSPPVPS-----RPLELAVGNFGAQPG-IGGGEMYGAADLL 265
           ++  I+   + +   ++   S  V +       L+L  G FG +   + GG   G   L 
Sbjct: 219 KLRNISWGNIHRE--HHQRNSCSVGNDHENKSSLDLCSGLFGLEKSRVNGGCRSG---LW 273

Query: 266 RSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGI 325
           +S                       ++MA  G PLW+ SL+    +LN DEY+  F    
Sbjct: 274 KS----------------------FVQMASAGAPLWVKSLETGREILNYDEYLTKFSTVD 311

Query: 326 GPKPTGFK-CEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGN 384
                  +  EASR++ VV ++   LV   MDV ++  +F  ++S+A TL+V+  G   N
Sbjct: 312 SSNVQRLRFIEASRDSGVVFVDLPQLVRSFMDVKEFKEMFPCMISKAATLDVICNGEGPN 371

Query: 385 YNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP---SPAVRCR 441
             GA+Q+M AE Q+ +PLV TRE Y+VRY KQ     WA+VDVS+DN+     +   RCR
Sbjct: 372 RKGAVQLMFAELQMLTPLVATREVYFVRYSKQLTAEKWAIVDVSIDNVEKNIDASLARCR 431

Query: 442 RRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCER 501
           +RPSGC+I++  NG+ KVTW+EH E      H++++ ++++G AFGA+ W+ATL +QCER
Sbjct: 432 KRPSGCIIEDKSNGHCKVTWIEHWECQKSVSHSMFRAIINSGLAFGARNWMATLQQQCER 491

Query: 502 LASVMATNIPTGEVGVITNQDGRKSMLKLAERM-VISFCAGVSASTAHTWTTLSGTGADD 560
           L   +ATN+PT +   I    GRKS+LKLA+RM V      + AS+ HTW  +      D
Sbjct: 492 LVFFLATNVPTKDSCGIGTLAGRKSILKLAQRMNVRVLVRALGASSYHTWKKIPSKTGYD 551

Query: 561 VRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEM 620
           +R  +RK+++D G P G++L A +S WLPV    +FDFLRDE  R+EWDI+SNGG VQ +
Sbjct: 552 IRA-SRKNLNDAGEPLGVILCAVSSIWLPVSHTLLFDFLRDETRRNEWDIMSNGGPVQSI 610

Query: 621 AHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVL 680
           A++A G+D GN VS+  +         + NM ++Q+SCT+   S V+ APV + AM  ++
Sbjct: 611 ANLAKGQDQGNTVSIHTMKW-------KENMWMIQDSCTNAYESMVVCAPVAVTAMQSIM 663

Query: 681 NGGDPDYVALLPSGF 695
            G D   +A+L  GF
Sbjct: 664 AGCDSSNIAILTLGF 678


>gi|186511404|ref|NP_001118907.1| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
 gi|332656527|gb|AEE81927.1| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
          Length = 570

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 242/461 (52%), Positives = 321/461 (69%), Gaps = 21/461 (4%)

Query: 60  RLREEEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           R REEE +S +SGS+N EG SG+DQ+   +P +KKRYHRHT  QIQE+E+ FKECPHPD+
Sbjct: 103 RSREEEHES-RSGSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHPDE 161

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSN 177
           KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KLRA+NM  REA+ N
Sbjct: 162 KQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRN 221

Query: 178 ASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPS 237
             C NCGGP  +G++S +EHHLR+ENARL++E+DR+  +  K++G    +         +
Sbjct: 222 PICTNCGGPAMLGDVSLEEHHLRIENARLKDELDRVCNLTGKFLGHHHNH-------HYN 274

Query: 238 RPLELAV------GNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELI 291
             LELAV      G+F   P  GGG         +S        K +++ELA+ AM+EL+
Sbjct: 275 SSLELAVGTNNNGGHFAFPPDFGGGGGCLPPQQQQSTVINGIDQKSVLLELALTAMDELV 334

Query: 292 RMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLV 351
           ++AQ  EPLW+ SLDG    LN+DEY+RTF      KPTG   EASR + +VI+N ++LV
Sbjct: 335 KLAQSEEPLWVKSLDGERDELNQDEYMRTFS---STKPTGLATEASRTSGMVIINSLALV 391

Query: 352 EILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYV 411
           E LMD N+W+ +F   V+RA T +V+S G+AG  NGALQ+M AE QV SPLVP R   ++
Sbjct: 392 ETLMDSNRWTEMFPCNVARATTTDVISGGMAGTINGALQLMNAELQVLSPLVPVRNVNFL 451

Query: 412 RYCKQHGEGTWAVVDVSLDNLRPSP--AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 469
           R+CKQH EG WAVVDVS+D +R +   A   RR PSGC++Q++ NGYSKVTWVEH E D+
Sbjct: 452 RFCKQHAEGVWAVVDVSIDPVRENSGGAPVIRRLPSGCVVQDVSNGYSKVTWVEHAEYDE 511

Query: 470 RGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI 510
             +H LY+ L+ +G  FG++RW+ATL RQCE LA ++++++
Sbjct: 512 NQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAILISSSV 552


>gi|14587301|dbj|BAB61212.1| putative homeobox protein GLABRA2 [Oryza sativa Japonica Group]
          Length = 779

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 285/712 (40%), Positives = 392/712 (55%), Gaps = 66/712 (9%)

Query: 89  NKKKR---YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           NKK+R   YHRHT  QI+ MEA FKE PHPD++QR+++S++LGL   QVKFWFQN+RTQ+
Sbjct: 91  NKKRRRKNYHRHTAEQIRIMEALFKESPHPDERQRQQVSKQLGLSARQVKFWFQNRRTQI 150

Query: 146 KTQHERHENTQLRTENEKLRADNMRYREALSNAS-CPNCG-------GPTAIGEMSFDEH 197
           K   ERHEN+ L++E EKL+ ++   RE     S C NCG          A       E 
Sbjct: 151 KAVQERHENSLLKSELEKLQDEHRAMRELAKKPSRCLNCGVVATSSDAAAAATAADTREQ 210

Query: 198 HLRLENARLREEIDRISAIAAKYVGKPVVNYPL------LSPPVPSRPLELAVGNFGAQP 251
            LRLE A+L+ EI+R+     K     + + P       +     S PL    G F    
Sbjct: 211 RLRLEKAKLKAEIERLRGTPGKSAADGIASPPCSASAGAMQTNSRSPPLHDHDGGF---- 266

Query: 252 GIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAV 311
                        LR      + DKP I+ELA  A++EL+ M   GEP+W+  ++    +
Sbjct: 267 -------------LRH-----DDDKPRILELATRALDELVGMCSSGEPVWVRGVETGRDI 308

Query: 312 LNEDEYVRTFPR---GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIV 368
           LN DEYVR F R   G G +  G+  EASRE  +V ++ + LV   MDV++W  +F  ++
Sbjct: 309 LNYDEYVRLFRRDHGGSGDQMAGWTVEASRECGLVYLDTMHLVHTFMDVDKWKDLFPTMI 368

Query: 369 SRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS 428
           S+A TLE++S       +G LQ+M AE Q  +P+VPTRE Y+ RYCK+     WA+VDVS
Sbjct: 369 SKAATLEMISNREDDGRDGVLQLMYAELQTLTPMVPTRELYFARYCKKLAAERWAIVDVS 428

Query: 429 LDN----LRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGN 484
            D     +  S AVRC + PSGCLI+E  NG  K+TWVEH       V  LY+ + ++G 
Sbjct: 429 FDESETGVHASSAVRCWKNPSGCLIEEQNNGRCKMTWVEHTRCRRCTVAPLYRAVTASGV 488

Query: 485 AFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSA 544
           AFGA+RWVA L  QCER+   +ATN+PT +   ++   GR+S+LKLA RM  S C     
Sbjct: 489 AFGARRWVAALQLQCERMVFAVATNVPTRDSTGVSTLAGRRSVLKLAHRMTSSLCRTTGG 548

Query: 545 STAHTW-----TTLSGTGADDVRVMTRKSV-DDPGRPPGIVLSAATSFWLPVPPKRVFDF 598
           S    W         G G DD+ + +R++  DDPG P G++  AA S WLPV P  + D 
Sbjct: 549 SCDMAWRRAPKGGSGGGGDDDIWLTSRENAGDDPGEPQGLIACAAASTWLPVNPTALLDL 608

Query: 599 LRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESC 658
           LRDE+ R EWD++  G  VQ   ++A G+D  NC +             +    +LQ+ C
Sbjct: 609 LRDESRRPEWDVMLPGKSVQSRVNLAKGKDRTNCAA------RPEEEEERGGKWVLQDVC 662

Query: 659 TDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGF-AILPDGTSLHGANI------GE 711
           T+P  S + YA +D  A+  V+ G D   V LLP GF +++PDG     A I      GE
Sbjct: 663 TNPCESTIAYAAIDAAALQPVIAGHDSSGVHLLPCGFISVMPDGLESKPAVITASRRGGE 722

Query: 712 AASGGSLLTVAFQILVDSVPTAK-LSLGSVATVNNLIACTVERIKASLSCES 762
           A+  GSL+TVAFQ+       A  LS  SV  V  L++ T+  I+ +L C+S
Sbjct: 723 ASGAGSLVTVAFQVPASPSAAAATLSPDSVEAVTVLVSSTLRNIRKALGCDS 774


>gi|60099373|dbj|BAD89977.1| mutant protein of GL2 [Arabidopsis thaliana]
          Length = 633

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/564 (42%), Positives = 347/564 (61%), Gaps = 46/564 (8%)

Query: 78  GASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFW 137
           GA+G+    +  K+K+YHRHT  QI+ MEA FKE PHPD+KQR++LS++LGL P QVKFW
Sbjct: 88  GAAGNKGTNK-RKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVKFW 146

Query: 138 FQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALS--NASCPNCGGPTAIGEMSFD 195
           FQN+RTQ+K   ERHEN+ L+ E EKLR +N   RE+ S  N+SCPNCGG         D
Sbjct: 147 FQNRRTQIKAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGP-------D 199

Query: 196 EHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGG 255
           + HL  EN++L+ E+D++ A   +        YPL +     +   L             
Sbjct: 200 DLHL--ENSKLKAELDKLRAALGR------TPYPLQASCSDDQEHRL------------- 238

Query: 256 GEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNED 315
               G+ D    + A    +K  I E++  A  EL +MA  GEP+W+ S++    +LN D
Sbjct: 239 ----GSLDFYTGVFA---LEKSRIAEISNRATLELQKMATSGEPMWLRSVETGREILNYD 291

Query: 316 EYVRTFPRGIGPKPTGFKC-EASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTL 374
           EY++ FP+       G K  EASR+  +V M+   L +  MDV QW   F+ ++S+A T+
Sbjct: 292 EYLKEFPQAQASSFPGRKTIEASRDAGIVFMDAHKLAQSFMDVGQWKETFACLISKAATV 351

Query: 375 EVLSTGVA-GNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL---- 429
           +V+  G      +GA+Q+M  E Q+ +P+VPTRE Y+VR C+Q     WA+VDVS+    
Sbjct: 352 DVIRQGEGPSRIDGAIQLMFGEMQLLTPVVPTREVYFVRSCRQLSPEKWAIVDVSVSVED 411

Query: 430 -DNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGA 488
            +  + +  ++CR+ PSGC+I++  NG+SKVTWVEH++V    V  L++ LV+TG AFGA
Sbjct: 412 SNTEKEASLLKCRKLPSGCIIEDTSNGHSKVTWVEHLDVSASTVQPLFRSLVNTGLAFGA 471

Query: 489 KRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAH 548
           + WVATL   CERL   MATN+PT +   +T   GRKS+LK+A+RM  SF   ++AS+ H
Sbjct: 472 RHWVATLQLHCERLVFFMATNVPTKDSLGVTTLAGRKSVLKMAQRMTQSFYRAIAASSYH 531

Query: 549 TWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
            WT ++     D+RV +RK++ DPG P G+++ A++S WLPV P  +FDF RDE  R EW
Sbjct: 532 QWTKITTKTGQDMRVSSRKNLHDPGEPTGVIVCASSSLWLPVSPALLFDFFRDEARRHEW 591

Query: 609 DILSNGGVVQEMAHIANGRD-TGN 631
           D LSNG  VQ +A+++  R  +GN
Sbjct: 592 DALSNGAHVQSIANLSRQRQLSGN 615


>gi|317468126|gb|ADV30316.1| GLABRA2 [Mimulus guttatus]
          Length = 558

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 239/586 (40%), Positives = 349/586 (59%), Gaps = 40/586 (6%)

Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNM 169
           KE PHPD+ QR +LS++LGL P QVKFWFQN+RTQ+K   ERHEN+ L+TE +KLR +N 
Sbjct: 1   KESPHPDENQRLQLSKQLGLHPRQVKFWFQNRRTQIKAIQERHENSVLKTEMDKLRDENK 60

Query: 170 RYREALSNASCPNCGGPTAIGEMSF----DEHHLRLENARLREEIDRISAIAAKYVGKPV 225
             RE L + SCPNCG  T  G+ S     DE  LR+ENA L+ E++++ +I  K      
Sbjct: 61  VLRETLKSPSCPNCGFATTSGKESITAATDEQRLRIENATLKTEVEKLRSIIGKSSQGTS 120

Query: 226 VNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVA 285
            N    SPP      E    +F    G  G E     D ++S                  
Sbjct: 121 PNTSSCSPPGNINDQE-NRSSFDFNTGNIGLERLRVKDTVKS------------------ 161

Query: 286 AMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF-----PRGIGPKPTGFKCEASRET 340
           A+ ELI+MA   EPLW+ S +    +LN DEY + F        + P  +    EASR++
Sbjct: 162 ALNELIKMATHREPLWVPSYETGREILNYDEYTKQFGNENYYNKMQPNKS---IEASRDS 218

Query: 341 AVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPS 400
           A++ ++ + LV+  MD N+W  +F  ++S A T++V+  G   N + A+ +M AE Q+ +
Sbjct: 219 AIIFVDLLWLVQSFMDANRWQELFPCLISSASTVDVICNGEXENGDXAVHLMFAEIQMLT 278

Query: 401 PLVPTRESYYVRYCKQHGEGTWAVVDVSLD--NLRPSPAVRCRRRPSGCLIQEMPNGYSK 458
           P+V TRE Y+ R+CK+     WA+VDVS+D  N+  S + +CR+RPSGC+I++  NG+ K
Sbjct: 279 PMVATREMYFFRHCKKLNTNQWAIVDVSIDEDNIDAS-SQKCRKRPSGCIIEDKSNGHCK 337

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTW+EH+E     +H+LY+ +V+TG AFGA+ W+ TL +QCERL   +ATN+P  +   +
Sbjct: 338 VTWMEHIECQKIPIHSLYRSIVNTGLAFGARHWICTLQQQCERLVFHVATNVPVKDSSGV 397

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
               GRKS+L L++RM  SFC  +  S   +W  +     DD+RV  R ++++ G P G 
Sbjct: 398 DTLAGRKSILTLSQRMSWSFCRAIGGSRRISWKKIVSKTGDDIRVSLRNNLNEQGEPLGT 457

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRV 638
           +LSA +S WLP+    +FDFLRDEN R+EWDI+SNG  V    ++A G+D GN V+++ +
Sbjct: 458 ILSAVSSIWLPLSHHALFDFLRDENRRNEWDIMSNGSTVHSTVNLAKGQDRGNAVTVMDM 517

Query: 639 NCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGD 684
                    + ++L+LQ+SCT+   S V+YAPVDI  M  V+ G D
Sbjct: 518 ------KGEEQSVLVLQDSCTNAYESMVVYAPVDIKGMQSVMTGCD 557


>gi|255571291|ref|XP_002526595.1| Homeobox protein GLABRA2, putative [Ricinus communis]
 gi|223534089|gb|EEF35807.1| Homeobox protein GLABRA2, putative [Ricinus communis]
          Length = 546

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/502 (46%), Positives = 338/502 (67%), Gaps = 20/502 (3%)

Query: 273 EADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGF 332
           E +K ++ E A +AMEELIR+ ++ EPLW+ S      V++ D Y + FPR    K +  
Sbjct: 47  EMEKALMHETAASAMEELIRLLRISEPLWIKSQSDGKYVIHRDSYDKVFPRTNHFKGSNA 106

Query: 333 KCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVM 392
           + E+S+E+ +V +N ++LVEI +D N+W  +F  IV++A  ++VL TG+ GN +G+LQ+M
Sbjct: 107 RIESSKESVMVAINALNLVEIFLDPNKWVDLFPTIVTKASIIQVLETGMLGNRSGSLQLM 166

Query: 393 TAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP-AVRCRRRPSGCLIQE 451
             +  + SPLVP RE Y++R+C+Q    TW + DVS D L+ +  + R  + PSGC+I+E
Sbjct: 167 YEQMHILSPLVPPREFYFLRHCQQIEGATWVIADVSYDCLKETILSSRSWKLPSGCMIEE 226

Query: 452 MPNGYSKVTWVEHVEVDDRG-VHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI 510
           +PNG+SKVTW+EHVEVDD+   H LY+ L+   +A+GA+RW+A L R CERLA      +
Sbjct: 227 LPNGFSKVTWIEHVEVDDKTQTHRLYRDLICGSSAYGAERWIAALQRVCERLAFSFRETL 286

Query: 511 PTGEV-GVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSV 569
           PT +  GVIT+ +GR+S++KL+ RMV SFCA +S S    +  LS      VRV  RKS 
Sbjct: 287 PTRDFGGVITSTEGRRSLMKLSHRMVRSFCAMLSMSGKLDFPQLSEVNNSGVRVSVRKST 346

Query: 570 DDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDT 629
            +PG+P G+++SAATS WLP+PP+ VF F +DE TR +WDILSNG  V E+AHI+NG   
Sbjct: 347 -EPGQPGGLIVSAATSLWLPLPPQNVFSFFKDEKTRVQWDILSNGKPVHEIAHISNGTHP 405

Query: 630 GNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVA 689
           GNC++++R         S++NML+LQESCTDP+ S V+YAPVDI +MN+ ++G D   + 
Sbjct: 406 GNCIAIIRPFV-----PSENNMLMLQESCTDPSGSLVVYAPVDIPSMNIAISGEDSSIIP 460

Query: 690 LLPSGFAI----LPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTA-------KLSLG 738
           +LPSGF I     PD  ++   +     +GGSLLTVAFQILV +  +        ++++ 
Sbjct: 461 ILPSGFVISGDGRPDAGNVASTSANAGRTGGSLLTVAFQILVSTPTSTSSSFSTKEMNME 520

Query: 739 SVATVNNLIACTVERIKASLSC 760
           SVATVN LI+ TV++IKA+L+C
Sbjct: 521 SVATVNTLISSTVQKIKAALNC 542


>gi|75106330|sp|Q5JMF3.1|ROC9_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC9; AltName:
           Full=GLABRA 2-like homeobox protein 9; AltName:
           Full=HD-ZIP protein ROC9; AltName: Full=Homeodomain
           transcription factor ROC9; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 9
 gi|57900354|dbj|BAD87344.1| putative homeodomain protein [Oryza sativa Japonica Group]
          Length = 816

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 289/742 (38%), Positives = 396/742 (53%), Gaps = 89/742 (11%)

Query: 89  NKKKR---YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           NKK+R   YHRHT  QI+ MEA FKE PHPD++QR+++S++LGL   QVKFWFQN+RTQ+
Sbjct: 91  NKKRRRKNYHRHTAEQIRIMEALFKESPHPDERQRQQVSKQLGLSARQVKFWFQNRRTQI 150

Query: 146 KTQHERHENTQLRTENEKLRADNMRYREALSNAS-CPNCG-------GPTAIGEMSFDEH 197
           K   ERHEN+ L++E EKL+ ++   RE     S C NCG          A       E 
Sbjct: 151 KAVQERHENSLLKSELEKLQDEHRAMRELAKKPSRCLNCGVVATSSDAAAAATAADTREQ 210

Query: 198 HLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVP-SRPL-----------ELAVG 245
            LRLE A+L+ E+                    + PP   +RP            ELA+ 
Sbjct: 211 RLRLEKAKLKAEV-------------------CMPPPRSRARPFRCATLQDTDSGELAML 251

Query: 246 NFGAQPGIGGGEMYGAADLLRSISAPTEA------------------------DKPMIIE 281
           N      + G     AAD + S      A                        DKP I+E
Sbjct: 252 NLFQIERLRGTPGKSAADGIASPPCSASAGAMQTNSRSPPLHDHDGGFLRHDDDKPRILE 311

Query: 282 LAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPR---GIGPKPTGFKCEASR 338
           LA  A++EL+ M   GEP+W+  ++    +LN DEYVR F R   G G +  G+  EASR
Sbjct: 312 LATRALDELVGMCSSGEPVWVRGVETGRDILNYDEYVRLFRRDHGGSGDQMAGWTVEASR 371

Query: 339 ETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQV 398
           E  +V ++ + LV   MDV++W  +F  ++S+A TLE++S       +G LQ+M AE Q 
Sbjct: 372 ECGLVYLDTMHLVHTFMDVDKWKDLFPTMISKAATLEMISNREDDGRDGVLQLMYAELQT 431

Query: 399 PSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN----LRPSPAVRCRRRPSGCLIQEMPN 454
            +P+VPTRE Y+ RYCK+     WA+VDVS D     +  S AVRC + PSGCLI+E  N
Sbjct: 432 LTPMVPTRELYFARYCKKLAAERWAIVDVSFDESETGVHASSAVRCWKNPSGCLIEEQNN 491

Query: 455 GYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGE 514
           G  K+TWVEH       V  LY+ + ++G AFGA+RWVA L  QCER+   +ATN+PT +
Sbjct: 492 GRCKMTWVEHTRCRRCTVAPLYRAVTASGVAFGARRWVAALQLQCERMVFAVATNVPTRD 551

Query: 515 VGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTW-----TTLSGTGADDVRVMTRKSV 569
              ++   GR+S+LKLA RM  S C     S    W         G G DD+ + +R++ 
Sbjct: 552 STGVSTLAGRRSVLKLAHRMTSSLCRTTGGSCDMAWRRAPKGGSGGGGDDDIWLTSRENA 611

Query: 570 -DDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRD 628
            DDPG P G++  AA S WLPV P  + D LRDE+ R EWD++  G  VQ   ++A G+D
Sbjct: 612 GDDPGEPQGLIACAAASTWLPVNPTALLDLLRDESRRPEWDVMLPGKSVQSRVNLAKGKD 671

Query: 629 TGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYV 688
             NCV+             +    +LQ+ CT+P  S + YA +D  A+  V+ G D   V
Sbjct: 672 RTNCVTAYAAR--PEEEEERGGKWVLQDVCTNPCESTIAYAAIDAAALQPVIAGHDSSGV 729

Query: 689 ALLPSGF-AILPDGTSLHGANI------GEAASGGSLLTVAFQILVDSVPTAK-LSLGSV 740
            LLP GF +++PDG     A I      GEA+  GSL+TVAFQ+       A  LS  SV
Sbjct: 730 HLLPCGFISVMPDGLESKPAVITASRRGGEASGAGSLVTVAFQVPASPSAAAATLSPDSV 789

Query: 741 ATVNNLIACTVERIKASLSCES 762
             V  L++ T+  I+ +L C+S
Sbjct: 790 EAVTVLVSSTLRNIRKALGCDS 811


>gi|197116201|dbj|BAG68840.1| homeodomain-containing transcription factor FWA [Arabidopsis
           kawasakiana]
          Length = 690

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 266/713 (37%), Positives = 399/713 (55%), Gaps = 50/713 (7%)

Query: 64  EEFDST-----KSGSENHEG-----ASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECP 113
           ++FD+       SG+EN E      A+  D +Q   + +R HRHT +Q QE+E F+ E P
Sbjct: 6   DDFDAVGNIPNPSGAENGESDHMIDATSGDNDQDGGRMRRAHRHTAYQTQELENFYLENP 65

Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYRE 173
            P + QR EL + L +EP QVKFWFQNKR QMK   +R EN  LR ++++L     + R 
Sbjct: 66  LPTEDQRYELGQRLNMEPKQVKFWFQNKRNQMKINSDRLENITLREDHDRLLLTQHQLRS 125

Query: 174 ALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSP 233
           A+ + SC  CG  T  G++ ++   L +EN  L  EI++   + +K   +P  N  L+S 
Sbjct: 126 AMLHCSCNICGRATNCGDIDYEVQKLIVENTILEREINQ---LYSKIPSRP--NQMLVS- 179

Query: 234 PVPSRPLELAVGNFG--AQP--GIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEE 289
             PS+P   +  N G  A P  G+GGG            +  TE ++ M ++LA+ A++E
Sbjct: 180 --PSQPPHCSSSNPGINATPELGLGGG------------TRTTEKERSMFLDLAIKALKE 225

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHIS 349
           L+ + +M  P        + AV   +E  +     +  KP G   EASRE  +V M  ++
Sbjct: 226 LLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNV-TKPPGHVVEASREIGLVPMTCLT 284

Query: 350 LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESY 409
           LV+  MD  +W  VF+ IV  A T +V+ TG  G  +G+LQ++ AEFQV SPLVP R+  
Sbjct: 285 LVKTFMDTEKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQVISPLVPKRQVT 344

Query: 410 YVRYCKQHGEGTWAVVDVSLDNLRP---SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVE 466
           ++RYCK+   G W VVDV+ D   P   S      R PSG  I++M NGYS+VTW+E  E
Sbjct: 345 FLRYCKELRHGLWVVVDVTPDQ-NPTLLSDGGSINRLPSGLFIEDMANGYSQVTWIEQAE 403

Query: 467 VDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS 526
            ++  +H LY+ L+ +G   GA RW+ATL R CE L+++ +TN+   E+    +  G   
Sbjct: 404 YNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNL--AEISPGLSAKGASE 461

Query: 527 MLKLAERMVISFCAGVSASTAHTWTTLSGTG-ADDVRVMTRKSVDDPGRPPGIVLSAATS 585
           ++KLA+RM +++  G+++S+ + W  +       ++  M RK+V++PG P GI+LSAATS
Sbjct: 462 VVKLAQRMTLNYYTGITSSSGNKWEKIQVENVVQNMSFMIRKNVNEPGEPTGILLSAATS 521

Query: 586 FWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSAN 645
            W PV  K +F FL + + R  WD L++   ++E   I   +  GN +SLL+        
Sbjct: 522 VWFPVKQKALFAFLSNPSFRHVWDTLTHNATMEETIRIQKAKRHGNIISLLKF------- 574

Query: 646 SSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH 705
            + + ML+LQE   D + + V+Y+PV+   +  V  GG+ DYV LLPSGF+I+PDG    
Sbjct: 575 -AGNGMLVLQEIWNDASGAMVVYSPVETNPIEWVKRGGESDYVQLLPSGFSIIPDGVPDR 633

Query: 706 GANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
                    GG LLT   Q+L  S PTA+L  G V  V  L+  T+ +IK++L
Sbjct: 634 KGKSKTGGGGGCLLTFGLQLLFSSNPTAELPQGYVKNVEVLMVHTISKIKSAL 686


>gi|197116169|dbj|BAG68833.1| homeodomain-containing transcription factor FWA [Arabidopsis lyrata
           subsp. lyrata]
          Length = 690

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 266/713 (37%), Positives = 398/713 (55%), Gaps = 50/713 (7%)

Query: 64  EEFDST-----KSGSENHEG-----ASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECP 113
           ++FD+       SG+EN E      A+  D +Q   + +R HRHT +Q QE+E F+ E P
Sbjct: 6   DDFDAVGNIPNPSGAENGESDHMIDATSGDNDQDGGRMRRAHRHTAYQTQELENFYLENP 65

Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYRE 173
            P + QR EL + L +EP QVKFWFQNKR Q K   +R EN  LR ++++L     + R 
Sbjct: 66  LPTEDQRYELGQRLNMEPKQVKFWFQNKRNQTKINSDRLENITLREDHDRLLLTQHQLRS 125

Query: 174 ALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSP 233
           A+ + SC  CG  T  G++ ++   L +EN  L  EI++   + +K   +P  N  L+S 
Sbjct: 126 AMLHCSCNICGRATNCGDIDYEVQKLIVENTILEREINQ---LYSKIPSRP--NQMLVS- 179

Query: 234 PVPSRPLELAVGNFG--AQP--GIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEE 289
             PS+P   +  N G  A P  G+GGG            +  TE ++ M ++LA+ A++E
Sbjct: 180 --PSQPPHCSSSNPGINATPELGLGGG------------TRTTEKERSMFLDLAIKALKE 225

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHIS 349
           L+ + +M  P        + AV   +E  +     +  KP G   EASRE  +V M  ++
Sbjct: 226 LLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNV-TKPPGHVVEASREIGLVPMTCLT 284

Query: 350 LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESY 409
           LV+  MD  +W  VF+ IV  A T +V+ TG  G  +G+LQ++ AEFQV SPLVP R+  
Sbjct: 285 LVKTFMDTEKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQVISPLVPKRQVT 344

Query: 410 YVRYCKQHGEGTWAVVDVSLDNLRP---SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVE 466
           ++RYCK+   G W VVDV+ D   P   S      R PSG  I++M NGYS+VTW+E  E
Sbjct: 345 FLRYCKELRHGLWVVVDVTPDQ-NPTLLSDGGSINRLPSGLFIEDMANGYSQVTWIEQAE 403

Query: 467 VDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS 526
            ++  +H LY+ L+ +G   GA RW+ATL R CE L+++ +TN+   E+    +  G   
Sbjct: 404 YNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNL--AEISPGLSAKGASE 461

Query: 527 MLKLAERMVISFCAGVSASTAHTWTTLSGTG-ADDVRVMTRKSVDDPGRPPGIVLSAATS 585
           ++KLA+RM +++  G+++S+ + W  +       ++  M RK+V++PG P GI+LSAATS
Sbjct: 462 VVKLAQRMTLNYYTGITSSSGNKWEKIQVENVVQNMSFMIRKNVNEPGEPTGILLSAATS 521

Query: 586 FWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSAN 645
            W PV  K +F FL + + R  WD L++   ++E   I   +  GN +SLL+        
Sbjct: 522 VWFPVKQKALFAFLSNPSFRHVWDTLTHNATMEETIRIQKAKRHGNIISLLKF------- 574

Query: 646 SSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH 705
            + + ML+LQE   D + + V+Y+PV+   +  V  GGD DYV LLPSGF+I+PDG    
Sbjct: 575 -AGNGMLVLQEIWNDASGAMVVYSPVETNPIEWVKRGGDSDYVQLLPSGFSIMPDGVPDR 633

Query: 706 GANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
                    GG LLT   Q+L  S PTA+L  G V  V  L+  T+ +IK++L
Sbjct: 634 KGKSKTGGGGGCLLTFGLQLLFSSNPTAELPQGYVKNVEVLMVHTIGKIKSAL 686


>gi|197116167|dbj|BAG68832.1| homeodomain-containing transcription factor FWA [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 262/703 (37%), Positives = 394/703 (56%), Gaps = 41/703 (5%)

Query: 64  EEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKEL 123
           ++FD+      N  GA   + +Q   + +R HRHT +Q QE+E F+ E P P + QR EL
Sbjct: 6   DDFDAV-GNIPNPSGAENGESDQDGGRMRRAHRHTAYQTQELENFYLENPLPTEDQRYEL 64

Query: 124 SRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNC 183
            + L +EP QVKFWFQNKR Q+K   +R EN  LR ++++L     + R A+ + SC  C
Sbjct: 65  GQRLNMEPKQVKFWFQNKRNQIKINSDRLENITLREDHDRLLLTQHQLRSAMLHCSCNIC 124

Query: 184 GGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELA 243
           G  T  G++ ++   L +EN  L  EI++   + +K   +P  N  L+S   PS+P   +
Sbjct: 125 GRATNCGDIDYEVQKLIVENTILEREINQ---LYSKIPSRP--NQMLVS---PSQPPHCS 176

Query: 244 VGNFG--AQP--GIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEP 299
             N G  A P  G+GGG            +  TE ++ M ++LA+ A++EL+ + +M  P
Sbjct: 177 SSNPGINATPELGLGGG------------TRTTEKERSMFLDLAIKALKELLELGEMDCP 224

Query: 300 LWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQ 359
                   + AV   +E  +     +  KP G   EASRE  +V M  ++LV+  MD  +
Sbjct: 225 FGKIDSRSSKAVSLINEKYKNASNNV-TKPPGHVVEASREIGLVPMTCLTLVKTFMDTEK 283

Query: 360 WSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGE 419
           W  VF+ IV  A T +V+ TG  G  +G+LQ++ AEFQV SPLVP R+  ++RYCK+   
Sbjct: 284 WVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQVISPLVPKRQVTFLRYCKELRH 343

Query: 420 GTWAVVDVSLDNLRP---SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLY 476
           G W VVDV+ D   P   S      R PSG  I++M NGYS+VTW+E  E ++  +H LY
Sbjct: 344 GLWVVVDVTPDQ-NPTLLSDGGSINRLPSGLFIEDMANGYSQVTWIEQAEYNESHIHPLY 402

Query: 477 KQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVI 536
           + L+ +G   GA RW+ATL R CE L+++ +TN+   E+    +  G   ++KLA+RM +
Sbjct: 403 QPLIGSGIGLGATRWLATLQRHCESLSTLSSTNL--AEISPGLSAKGASEVVKLAQRMTL 460

Query: 537 SFCAGVSASTAHTWTTLSGTG-ADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRV 595
           ++  G+++S+ + W  +       ++  M RK+V++PG P GI+LSAATS W PV  K +
Sbjct: 461 NYYTGITSSSGNKWEKIQVENVVQNMSFMIRKNVNEPGEPTGILLSAATSVWFPVKQKAL 520

Query: 596 FDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQ 655
           F FL + + R  WD L++   ++E   I   +  GN +SLL+         + + ML+LQ
Sbjct: 521 FAFLSNPSFRHVWDTLTHNATMEETIRIQKAKRHGNIISLLKF--------AGNGMLVLQ 572

Query: 656 ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASG 715
           E   D + + V+Y+PV+   +  V  GGD DYV LLPSGF+I+PDG             G
Sbjct: 573 EIWNDASGAMVVYSPVETNPIEWVKRGGDSDYVQLLPSGFSIMPDGVPDRKGKSKTGGGG 632

Query: 716 GSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           G LLT   Q+L  S PTA+L  G V  V  L+  T+ +IK++L
Sbjct: 633 GCLLTFGLQLLFSSNPTAELPQGYVKNVEVLMVHTIGKIKSAL 675


>gi|197116191|dbj|BAG68835.1| homeodomain-containing transcription factor FWA [Arabidopsis lyrata
           subsp. petraea]
          Length = 690

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 265/713 (37%), Positives = 397/713 (55%), Gaps = 50/713 (7%)

Query: 64  EEFDST-----KSGSENHEG-----ASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECP 113
           ++FD+       SG+EN E      A+  D +Q   + +R HRHT +Q QE+E F+ E  
Sbjct: 6   DDFDAVGNIPNPSGAENGESDHMIDATSGDNDQDGGRMRRAHRHTAYQTQELENFYLENT 65

Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYRE 173
            P + QR EL + L +EP QVKFWFQNKR QMK   +  EN  LR ++++L     + R 
Sbjct: 66  LPTEDQRYELGQRLNMEPKQVKFWFQNKRNQMKINSDHLENITLREDHDRLLLTQHQLRS 125

Query: 174 ALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSP 233
           A+ + SC  CG  T  G++ ++   L +EN  L  EI++   + +K   +P  N  L+S 
Sbjct: 126 AMLHCSCNICGRATNCGDIDYEVQKLIVENTILEREINQ---LYSKIPSRP--NQMLVS- 179

Query: 234 PVPSRPLELAVGNFG--AQP--GIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEE 289
             PS+P   +  N G  A P  G+GGG            +  TE ++ M ++LA+ A++E
Sbjct: 180 --PSQPPHCSSSNPGINATPELGLGGG------------TRTTEKERSMFLDLAIKALKE 225

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHIS 349
           L+ + +M  P        + AV   +E  +     +  KP G   EASRE  +V M  ++
Sbjct: 226 LLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNV-TKPPGHVVEASREIGLVPMTCLT 284

Query: 350 LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESY 409
           LV+  MD  +W  VF+ IV  A T +V+ TG  G  +G+LQ++ AEFQV SPLVP R+  
Sbjct: 285 LVKTFMDTEKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQVISPLVPKRQVT 344

Query: 410 YVRYCKQHGEGTWAVVDVSLDNLRP---SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVE 466
           ++RYCK+   G W VVDV+ D   P   S      R PSG  I++M NGYS+VTW+E  E
Sbjct: 345 FLRYCKELRHGLWVVVDVTPDQ-NPTLLSDGGSINRLPSGLFIEDMANGYSQVTWIEQAE 403

Query: 467 VDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS 526
            ++  +H LY+ L+ +G   GA RW+ATL R CE L+++ +TN+   E+    +  G   
Sbjct: 404 YNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNL--AEISPGLSAKGASE 461

Query: 527 MLKLAERMVISFCAGVSASTAHTWTTLSGTG-ADDVRVMTRKSVDDPGRPPGIVLSAATS 585
           ++KLA+RM +++  G+++S+ + W  +       ++  M RK+V++PG P GI+LSAATS
Sbjct: 462 VVKLAQRMTLNYYTGITSSSGNKWEKIQVENVVQNMSFMIRKNVNEPGEPTGILLSAATS 521

Query: 586 FWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSAN 645
            W PV  K +F FL + + R  WD L++   ++E   I   +  GN +SLL+        
Sbjct: 522 VWFPVKQKALFAFLSNPSFRHVWDTLTHNATMEETIRIQKAKRHGNIISLLKF------- 574

Query: 646 SSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH 705
            + + ML+LQE   D + + V+Y+PV+   +  V  GGD DYV LLPSGF+I+PDG    
Sbjct: 575 -AGNGMLVLQEIWNDASGAMVVYSPVETNPIEWVKRGGDSDYVQLLPSGFSIMPDGVPDR 633

Query: 706 GANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
                    GG LLT   Q+L  S PTA+L  G V  V  L+  T+ +IK++L
Sbjct: 634 KGKSKTGGGGGCLLTFGLQLLFSSNPTAELPQGYVKNVEVLMVHTIGKIKSAL 686


>gi|197116189|dbj|BAG68834.1| homeodomain-containing transcription factor FWA [Arabidopsis lyrata
           subsp. petraea]
          Length = 690

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 265/713 (37%), Positives = 397/713 (55%), Gaps = 50/713 (7%)

Query: 64  EEFDST-----KSGSENHEG-----ASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECP 113
           ++FD+       SG+EN E      A+  D +Q   + +R HRHT +Q QE+E F+ E  
Sbjct: 6   DDFDAVGNIPNPSGAENGESDHMIDATSGDNDQDGGRMRRAHRHTAYQTQELENFYLENT 65

Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYRE 173
            P + QR EL + L +EP QVKFWFQNKR QMK   +  EN  LR ++++L     + R 
Sbjct: 66  LPTEDQRYELGQRLNMEPKQVKFWFQNKRNQMKINSDHLENITLREDHDRLLLTQHQLRS 125

Query: 174 ALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSP 233
           A+ + SC  CG  T  G++ ++   L +EN  L  EI++   + +K   +P  N  L+S 
Sbjct: 126 AMLHCSCNICGRATNCGDIDYEVQKLIVENTILEREINQ---LYSKIPSRP--NQMLVS- 179

Query: 234 PVPSRPLELAVGNFG--AQP--GIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEE 289
             PS+P   +  N G  A P  G+GGG            +  TE ++ M ++LA+ A++E
Sbjct: 180 --PSQPPHCSSSNPGINATPELGLGGG------------TRTTEKERSMFLDLAIKALKE 225

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHIS 349
           L+ + +M  P        + AV   +E  +     +  KP G   EASRE  +V M  ++
Sbjct: 226 LLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNV-TKPPGHVVEASREIGLVPMTCLT 284

Query: 350 LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESY 409
           LV+  MD  +W  VF+ IV  A T +V+ TG  G  +G+LQ++ AEFQV SPLVP R+  
Sbjct: 285 LVKTFMDTEKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQVISPLVPKRQVT 344

Query: 410 YVRYCKQHGEGTWAVVDVSLDNLRP---SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVE 466
           ++RYCK+   G W VVDV+ D   P   S      R PSG  I++M NGYS+VTW+E  E
Sbjct: 345 FLRYCKELRHGLWVVVDVTPDQ-NPTLLSDGGSINRLPSGLFIEDMANGYSQVTWIEQAE 403

Query: 467 VDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS 526
            ++  +H LY+ L+ +G   GA RW+ATL R CE L+++ +TN+   E+    +  G   
Sbjct: 404 YNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNL--AEISPGLSAKGASE 461

Query: 527 MLKLAERMVISFCAGVSASTAHTWTTLSGTG-ADDVRVMTRKSVDDPGRPPGIVLSAATS 585
           ++KLA+RM +++  G+++S+ + W  +       ++  M RK+V++PG P GI+LSAATS
Sbjct: 462 VVKLAQRMTLNYYTGITSSSGNKWEKIQVENVVQNMSFMIRKNVNEPGEPNGILLSAATS 521

Query: 586 FWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSAN 645
            W PV  K +F FL + + R  WD L++   ++E   I   +  GN +SLL+        
Sbjct: 522 VWFPVKQKALFAFLSNPSFRHVWDTLTHNATMEETIRIQKAKRHGNIISLLKF------- 574

Query: 646 SSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH 705
            + + ML+LQE   D + + V+Y+PV+   +  V  GGD DYV LLPSGF+I+PDG    
Sbjct: 575 -AGNGMLVLQEIWNDASGAMVVYSPVETNPIEWVKRGGDSDYVQLLPSGFSIMPDGVPDR 633

Query: 706 GANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
                    GG LLT   Q+L  S PTA+L  G V  V  L+  T+ +IK++L
Sbjct: 634 KGKSKTGGGGGCLLTFGLQLLFSSNPTAELPQGYVKNVEVLMVHTIGKIKSAL 686


>gi|359494019|ref|XP_002278971.2| PREDICTED: homeobox-leucine zipper protein HDG2-like [Vitis
           vinifera]
          Length = 659

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/549 (44%), Positives = 341/549 (62%), Gaps = 48/549 (8%)

Query: 240 LELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEP 299
           L+  + +FG+  G    E+  A+DLL S+S  TE +K  I++L+ AA++EL++MA+  +P
Sbjct: 121 LDTEIEDFGSLSG-ARMELDRASDLLVSVSVGTEENKQKIVDLSSAALKELLKMAKEKQP 179

Query: 300 LWMTSLDGTAAVLNEDEYVRTF-------------------------PRGIGPKP----T 330
           LW   +DG   VLN  EY + F                         PR I   P     
Sbjct: 180 LWRDCIDG--EVLNHIEYTKQFGEIDKTAEKIMRKTEETLLSPNLGSPRHISALPEESRI 237

Query: 331 GFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQ 390
               EASR T  + ++ + +VE+LMD+NQ+STVFS IVSRA  L  LST   GNY+GALQ
Sbjct: 238 TLYTEASRHTQFLPVDPVHIVELLMDMNQYSTVFSSIVSRATILGNLSTDTPGNYDGALQ 297

Query: 391 VMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQ 450
           VM  EF  PSPL+PTRE +  R+ KQ   G W VVDVSL++L P+P +R RRR SGCL Q
Sbjct: 298 VMAVEFNAPSPLLPTRECHLARHSKQLATGIWGVVDVSLESLFPNPLIRYRRRSSGCLAQ 357

Query: 451 EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI 510
           ++PNG +K+ WVEH E DD  V  +++ LV++G+A+GAK W+  L RQCERL  +MA + 
Sbjct: 358 QLPNGVTKIIWVEHSEADDSSVPEMFQALVTSGHAYGAKHWLGNLVRQCERLGHIMARSD 417

Query: 511 PT-GEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSV 569
           P  GE+       GR+++L LAERM+  F A +S S+ +TW  +   GA++VR M R   
Sbjct: 418 PKPGEM----VSPGRENVLCLAERMMRKFWANLSDSSENTWRPVPLKGAENVRAMIRSGE 473

Query: 570 DDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDT 629
           D+ GRPPG  +  ATS W+P  P+RVFDFL D +TR+ WDIL+ G VV+E  HI NG D 
Sbjct: 474 DEEGRPPGTAIVIATSVWVPASPRRVFDFLHDVHTRNRWDILTCGHVVKETGHIDNGCDH 533

Query: 630 GNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVA 689
           GN VS+L V     +   Q  +++LQES T  T+S+V +APV+   ++++LNGG PD+V 
Sbjct: 534 GNRVSILEVK----SPEDQIVVILLQESYTTFTSSYVTFAPVEACTLDMILNGGSPDHVP 589

Query: 690 LLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIAC 749
           +LPSGF+ILPDG +  G +       GSL+T+AFQIL +S     +   SVAT+  L+  
Sbjct: 590 ILPSGFSILPDGPTRDGGS-------GSLVTMAFQILDNSSSATYIPPESVATIFKLVTE 642

Query: 750 TVERIKASL 758
           T E IKA++
Sbjct: 643 TAECIKAAM 651


>gi|356532433|ref|XP_003534777.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 675

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 259/711 (36%), Positives = 386/711 (54%), Gaps = 79/711 (11%)

Query: 78  GASGDDQE-QRPNKKKR---YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
           G SGDDQ  Q  NK K+   Y RH + Q   +E  F++CP+PD+ +R++++++LGLEP Q
Sbjct: 9   GGSGDDQHNQSLNKGKKTTTYRRHKEDQRTRLEELFRKCPNPDEIERRQIAKDLGLEPKQ 68

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGP-TAIGEM 192
           VKFWFQNKRTQ KT  ER +N  LR ENE++  +N+  REAL    CP+CGGP       
Sbjct: 69  VKFWFQNKRTQKKTISERVDNNVLRVENERMHNENLVLREALKTIICPSCGGPHNEEERR 128

Query: 193 SFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSP--------PVPSRPLELAV 244
                 LRLENARL+ + +++S    +++ KP++   L SP        P+    L L  
Sbjct: 129 ELCLEQLRLENARLKAQHEKLSKFLVQHMDKPILEQNLDSPIRGSSSHGPLLGSSLRLRA 188

Query: 245 G----NFGAQPGIGGGEMYGAADLLRSISAP---TEADKPMIIELAVAAMEELIRMAQMG 297
           G    N GA             D + S +     T+ +K M+  +AVAA +EL+++ +  
Sbjct: 189 GRSRMNLGA--STSHDSFQDEEDTMSSQAGSKIITQMEKTMMAHIAVAAKDELLKLLRTN 246

Query: 298 EPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDV 357
           EPLW+ S      VL+ + Y   FPR    K +  + E+S+++ +V +    LV++L++ 
Sbjct: 247 EPLWVKSSTDQRYVLHLECYETIFPRINHFKNSKARVESSKDSRIVRIKAKELVDMLLNS 306

Query: 358 NQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQH 417
             W  +FS IV++A T++VL  G   N +G L +M  E  V SPLVP+RE Y++RYC Q 
Sbjct: 307 EIWENLFSRIVTKARTIQVLENGSLENRSGVLLLMREEMHVLSPLVPSREFYFLRYCHQV 366

Query: 418 GEGTWAVVDVSLDNLRPSPAV-RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNL 475
               W + DVS+D ++ +     C R PSGC+IQ + NG  +V+WVEHVEVD++   H+L
Sbjct: 367 EANVWVIADVSVDCMKENNHDPNCWRFPSGCMIQGISNGMCQVSWVEHVEVDEKIQTHHL 426

Query: 476 YKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMV 535
           +K LV+   A+GA+RW+  L R CER  S+    IP  ++G                   
Sbjct: 427 FKDLVNRNIAYGAERWLLELQRMCERFTSLEVEYIPNYDIG------------------- 467

Query: 536 ISFCAGVSASTAHTWTTLSGTGADD---VRVMTRKSVDDPGRPPGIVLSAATSFWLPVPP 592
                                GAD+   +R+  RK  +     P I+++A TSF LP+P 
Sbjct: 468 ---------------------GADENTGIRICARKVTNSNQSNPNIIITATTSFRLPLPS 506

Query: 593 KRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNML 652
           + VFDF RD   R +WD +     + E+A I+ G    N +S+     +Q  + + +N++
Sbjct: 507 QNVFDFFRDPIRRVKWDAMCYKRPLHEIARISTGTHPNNYISI-----IQPIHPTANNVV 561

Query: 653 ILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEA 712
           I+QESCTDP  S+V+Y+  +I+ +   +NG D   +   PSG  I  +G S+  A    +
Sbjct: 562 IIQESCTDPLGSYVVYSSTNILDIKRTINGEDSSTMPFFPSGIVISEEGQSITNARASSS 621

Query: 713 ASG-----GSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
            +G     GSLLTVAFQIL++S PT  +    V  VN+LI  TVE I  +L
Sbjct: 622 GNGDVRTRGSLLTVAFQILMNSSPTMMMEF--VTVVNSLITSTVENINDAL 670


>gi|197116171|dbj|BAG68842.1| homeodomain-containing transcription factor FWA [Arabidopsis
           kamchatica]
          Length = 689

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/714 (37%), Positives = 398/714 (55%), Gaps = 53/714 (7%)

Query: 64  EEFDST-----KSGSENHEG-----ASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECP 113
           ++FD+       SG+EN E      A+  D +Q   + +R HRHT +Q QE+E F+ E P
Sbjct: 6   DDFDAVGNIPNPSGAENGESDHMIDATSGDNDQDGGRMRRAHRHTAYQTQELENFYLENP 65

Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYRE 173
            P + QR EL + L +EP QVKFWFQNKR QMK   +R EN  LR ++++L     + R 
Sbjct: 66  LPTEDQRYELGQRLNMEPKQVKFWFQNKRNQMKINSDRLENITLREDHDRLLLTQHQLRS 125

Query: 174 ALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSP 233
           A+ + SC  CG  T  G++ ++   L +EN  L  EI++   + +K   +P  N  L+S 
Sbjct: 126 AMLHCSCNICGRATNCGDIDYEVQKLIVENTILEREINQ---LYSKIPSRP--NQMLVS- 179

Query: 234 PVPSRPLELAVGNFG--AQP--GIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEE 289
             PS+P   +  N G  A P  G+GGG            +  TE ++ M ++LA+ A++E
Sbjct: 180 --PSQPPHCSSSNPGINATPELGLGGG------------TRTTEKERSMFLDLAIKALKE 225

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHIS 349
           L+ + +M  P        + AV   +E  +     +  KP G   EASRE  +V M  ++
Sbjct: 226 LLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNV-TKPPGHVVEASREIGLVPMTCLT 284

Query: 350 LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESY 409
           LV+  MD  +W  VF+ IV  A T +V+ TG  G  +G+LQ + AEFQV SPLVP R+  
Sbjct: 285 LVKTFMDTEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQAEFQVISPLVPRRQVT 344

Query: 410 YVRYCKQHGEGTWAVVDVSLDNLRPSPAVR----CRRRPSGCLIQEMPNGYSKVTWVEHV 465
           ++RYCK+   G W VVDV+ D    +P +       R PSG  I++M NGYS+VTW+E  
Sbjct: 345 FLRYCKELRHGLWVVVDVTPDQ---NPTLLSYGGSNRLPSGLFIEDMANGYSQVTWIEQA 401

Query: 466 EVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK 525
           E ++  +H LY+ L+ +G   GA RW+ATL R CE L+++ +TN+   E+    +  G  
Sbjct: 402 EYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNL--AEISPGLSAKGAA 459

Query: 526 SMLKLAERMVISFCAGVSASTAHTWTTLSGTG-ADDVRVMTRKSVDDPGRPPGIVLSAAT 584
            ++KLA+RM +++  G+++S+   W  +     A ++  M RK+V++PG   GI+LSAAT
Sbjct: 460 EVVKLAQRMTLNYYTGITSSSGDKWEKIQVENVAPNMSFMIRKNVNEPGEHSGILLSAAT 519

Query: 585 SFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSA 644
           S W PV  K +F FL + + R EWD L+N   ++E   I   +  GN +SLL++      
Sbjct: 520 SVWFPVNQKTLFAFLSNPSFRHEWDTLTNNTRMEETIRIQKAKRHGNIISLLKI------ 573

Query: 645 NSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSL 704
               ++ L+LQE   D + + V+YAPV+   M  V  GG+ D V LLPSGF+I+PDG   
Sbjct: 574 --VGNDTLVLQEIWNDASGAMVVYAPVETNPMEWVKRGGNSDSVQLLPSGFSIMPDGVPD 631

Query: 705 HGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
                     GGSL+T   QIL  S PTA +  G V  V  L+  T+ +IK++L
Sbjct: 632 RKGKSKNGGGGGSLVTFGLQILFSSNPTAVIPQGYVKNVEVLMVHTIGKIKSAL 685


>gi|6714433|gb|AAF26121.1|AC012328_24 hypothetical protein [Arabidopsis thaliana]
          Length = 695

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 267/675 (39%), Positives = 383/675 (56%), Gaps = 45/675 (6%)

Query: 109 FKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
           F ECPHPD++QR +L REL LEP Q+KFWFQNKRTQ KTQ +R  N  LR ENE L++DN
Sbjct: 40  FIECPHPDERQRNQLCRELKLEPDQIKFWFQNKRTQSKTQEDRSTNVLLRGENETLQSDN 99

Query: 169 MRYREALSNASCPNCGG-PTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYV-GKPVV 226
               +AL +  CP CGG P    E   +   LR ENARL++  DRIS    ++   +P V
Sbjct: 100 EAMLDALKSVLCPACGGPPFGREERGHNLQKLRFENARLKDHRDRISNFVDQHKPNEPTV 159

Query: 227 NYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLL----RSISAP---TEADKPMI 279
              L   P   R             GI GG MY  +         I  P    E D  ++
Sbjct: 160 EDSLAYVPSLDR----------ISYGINGGNMYEPSSSYGPPNFQIIQPRPLAETDMSLL 209

Query: 280 IELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP-KPTGFKCEASR 338
            E+A +A+EEL R+    E  W+ S      V++ + Y R F   +     T    E+S+
Sbjct: 210 SEIAASAVEELKRLFLAEEQFWVKSCIDETYVIDTESYER-FSHAVKHFSSTTAHVESSK 268

Query: 339 ETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTG--VAGNYNGALQVMTAEF 396
              VV +  I+L+++ +D  +W  +F  IV++A T+ VL +G  + GN N  LQVM  + 
Sbjct: 269 AVTVVHVEAINLIQMFLDPEKWKELFPTIVNKANTIHVLGSGLPIRGNCN-VLQVMWEQL 327

Query: 397 QVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGY 456
            + SPLVP RE   VR C++  +G W + DVS           C +RPSGCLIQ +P+ +
Sbjct: 328 HILSPLVPAREFMVVRCCQEIEKGIWIIADVSHRANFDFGNAACYKRPSGCLIQALPDAH 387

Query: 457 SKVTWVEHVEVDDR-GVHNLYKQLVSTGNAFGAKRWVATLDRQCERLA-SVMATNIPTGE 514
           SKV W+EHVEVD +   H +Y+ L+S G+ +GAKRW+ TL+R CER+A S + T  P+  
Sbjct: 388 SKVMWIEHVEVDHKLDTHKIYRDLLSGGSGYGAKRWIVTLERMCERMALSSIQTLPPSDR 447

Query: 515 VGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGR 574
             VIT  + R+S++KL ERMV +F   ++ S    +   S  G   VRV  R ++ + G+
Sbjct: 448 SEVITTGEARRSVMKLGERMVKNFNEMLTMSGKIDFPQQSKNG---VRVSIRMNI-EAGQ 503

Query: 575 PPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVS 634
           PPGIV+SA++S  +P+ P +VF FL++ +TR +WDILS G VV E+A I  G    NCV+
Sbjct: 504 PPGIVVSASSSLAIPLTPLQVFAFLQNLDTRQQWDILSYGTVVNEIARIVTGSSETNCVT 563

Query: 635 LLRV------NCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGG-DPDY 687
           +LR       + +   +S + +ML+LQ+   D     ++YAP+D+  M+  ++G  DP +
Sbjct: 564 ILRPTHEENNDKMVVQDSCKDDMLMLQDCYMDALGGMIVYAPMDMATMHFAVSGEVDPSH 623

Query: 688 VALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVP--TAKLSLGSVATVNN 745
           + +LPSGF I  DG             GG+LLTVAFQILV      + +++  SV TV+ 
Sbjct: 624 IPILPSGFVISSDGRR------STVEDGGTLLTVAFQILVSGKANRSREVNEKSVDTVSA 677

Query: 746 LIACTVERIKASLSC 760
           LI+ T++RIK  L+C
Sbjct: 678 LISSTIQRIKGLLNC 692


>gi|357448567|ref|XP_003594559.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355483607|gb|AES64810.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 699

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 259/717 (36%), Positives = 396/717 (55%), Gaps = 51/717 (7%)

Query: 68  STKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL 127
           S   GSE+ E  +G+ ++    +K  + R T  Q   ++ F KEC HPD+ +R +L+ E+
Sbjct: 4   SIGGGSESGEEVNGNFRDD--GEKSSHKRLTSAQTSILKNFMKECHHPDEAERHQLAVEV 61

Query: 128 GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPT 187
           GLEP Q+KFWFQNKRT +K QHER  N  LR EN+K+R +N++ +E L    C +CGGP 
Sbjct: 62  GLEPKQIKFWFQNKRTLLKHQHERETNGTLRRENDKIRNENLKIKEVLKAKICLDCGGPP 121

Query: 188 AIGEMSFDEHH-----LRLENARLREEIDRISAIAAKY----VGKPVVNYPLLSPPVPSR 238
                   +H      L+ ENA+L++E +++S++ A Y    + +P     L S    SR
Sbjct: 122 ----FPMKDHQNFVQDLKQENAQLKQECEKMSSLLASYMEKKISRPEFEQALKSIKSFSR 177

Query: 239 PLELAV---GNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQ 295
             E +    GN     G+ G          ++ +   +A K  + ++  AAM+EL+R+ +
Sbjct: 178 DYECSSHVHGNLATWGGVLG----------QTSTQNYDAQKITMSQVVDAAMDELVRLVR 227

Query: 296 MGEPLWMTSLDGT-AAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEIL 354
           + EP W+ S +       + + Y + FP+    K      E+S+ + +V ++ I LV + 
Sbjct: 228 VNEPFWVKSPNTQDGYTFHRESYEQVFPKNNHFKGANVCEESSKYSGLVKISGIDLVGMF 287

Query: 355 MDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYC 414
           +D  +W+ +F  IV++A T++V   G  G+ +GAL +M  E  + SPLV  RE   +RYC
Sbjct: 288 LDSVKWTNLFPTIVTKAETIKVFEIGSPGSRDGALLLMNEEMHILSPLVRPREFNIIRYC 347

Query: 415 KQHGEGTWAVVDVSLDNLRP--SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-G 471
           K+   G W + DVS D+ RP  +P  R  + PSGC+I+EMP+G   VTWVEHVEV+D+  
Sbjct: 348 KKFDAGVWVIADVSFDSSRPNTAPLSRGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKIH 407

Query: 472 VHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGE-VGVITNQDGRKSMLKL 530
            H +Y+ LV   N +GA+ W+  L R CER        IP  E +GVI   +GR S++KL
Sbjct: 408 THYVYRDLVGNYNLYGAESWIKELQRMCERSLGSYVEAIPVEETIGVIQTLEGRNSVIKL 467

Query: 531 AERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSV-DDPGRPPGIVLSAATSFWLP 589
           A+RMV  FC  ++         L+      +RV  R +  DD  +P G +++AAT+ WLP
Sbjct: 468 AQRMVKMFCESLTMPGQLELNHLTLASIGGIRVSFRSTTDDDTSQPNGTIVTAATTLWLP 527

Query: 590 VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQS 649
           +P  +VF+FL+D   RS+WD LS G  + E+AHI+NG   GNC+S+++         +Q 
Sbjct: 528 LPALKVFEFLKDPTKRSQWDGLSCGNPMHEIAHISNGPYHGNCISIIK-----PFIPTQR 582

Query: 650 NMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANI 709
            M+ILQES T    S++IYAP D   M+V L G D   + +LP GF +         A  
Sbjct: 583 QMMILQESFTSRVGSYIIYAPSDRQTMDVALRGEDSKELPILPYGFVVCSKSQPNLNAPF 642

Query: 710 GEAAS--GGSLLTVAFQIL------VDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           G + +   GSLLT+A QIL      +D V    L++  +  +N  +A T+  +K +L
Sbjct: 643 GASNNIEDGSLLTLAAQILSTSPHEIDQV----LNVEDITDINTHLATTILNVKDAL 695


>gi|197116203|dbj|BAG68841.1| homeodomain-containing transcription factor FWA [Arabidopsis
           kawasakiana]
          Length = 689

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 266/714 (37%), Positives = 397/714 (55%), Gaps = 53/714 (7%)

Query: 64  EEFDST-----KSGSENHEG-----ASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECP 113
           ++FD+       SG+EN E      A+  D +Q   + +R HRHT +Q QE+E  + E P
Sbjct: 6   DDFDAVGNIPNPSGAENGESDHMIDATSGDNDQDGGRMRRAHRHTAYQTQELENVYLENP 65

Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYRE 173
            P + QR EL + L +EP QVKFWFQNKR QMK   +R EN  LR ++++L     + R 
Sbjct: 66  LPTEDQRYELGQRLNMEPKQVKFWFQNKRNQMKINSDRLENIILREDHDRLLLTQHQLRS 125

Query: 174 ALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSP 233
           A+ + SC  CG  T  G++ ++   L +EN  L  EI++   + +K   +P  N  L+S 
Sbjct: 126 AMLHCSCNICGRATNCGDIDYEVQKLIVENTILEREINQ---LYSKIPSRP--NQMLVS- 179

Query: 234 PVPSRPLELAVGNFG--AQP--GIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEE 289
             PS+P   +  N G  A P  G+GGG            +  TE ++ M ++LA+ A++E
Sbjct: 180 --PSQPPHCSSSNPGINATPELGLGGG------------TRTTEKERSMFLDLAIKALKE 225

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHIS 349
           L+ + +M  P        + AV   +E  +     +  KP G   EASRE  +V M  ++
Sbjct: 226 LLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNV-TKPPGHVVEASREIGLVPMTCLT 284

Query: 350 LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESY 409
           LV+  MD+ +W  VF+ IV  A T +V+ TG  G  +G+LQ + AEFQV SPLVP R+  
Sbjct: 285 LVKTFMDMEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQAEFQVISPLVPKRQVT 344

Query: 410 YVRYCKQHGEGTWAVVDVSLDNLRPSPAVR----CRRRPSGCLIQEMPNGYSKVTWVEHV 465
           ++RYCK+   G W VVDV+ D    +P +       R PSG  I +M NGYS+VTW+E  
Sbjct: 345 FLRYCKELRHGLWVVVDVTPDQ---NPTLLSYGGSNRLPSGLFIADMANGYSQVTWIEQA 401

Query: 466 EVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK 525
           E ++  +H LY+ L+ +G   GA RW+ATL R CE L+++ +TN+   E+    +  G  
Sbjct: 402 EYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNL--AEISPGLSAKGAA 459

Query: 526 SMLKLAERMVISFCAGVSASTAHTWTTLSGTG-ADDVRVMTRKSVDDPGRPPGIVLSAAT 584
            ++KLA+RM +++  G+++S+   W  +     A ++  M RK+V++PG   GI+LSAAT
Sbjct: 460 EVVKLAQRMTLNYYTGITSSSGDKWEKIQVENVAPNMSFMIRKNVNEPGEHSGILLSAAT 519

Query: 585 SFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSA 644
           S W PV  K +F FL + + R EWD L+N   ++E   I   +  GN +SLL++      
Sbjct: 520 SVWFPVNQKTLFAFLSNPSFRHEWDTLTNNTRMEETIRIQKAKRHGNIISLLKI------ 573

Query: 645 NSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSL 704
               ++ L+LQE   D + + V+YAPV+   M  V  GG+ D V LLPSGF+I+PDG   
Sbjct: 574 --VGNDTLVLQEIWNDASGAMVVYAPVETNPMEWVKRGGNSDSVQLLPSGFSIMPDGVPD 631

Query: 705 HGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
                     GGSL+T   QIL  S PTA +  G V  V  L+  T+ +IK++L
Sbjct: 632 RKGKSKNGGGGGSLVTFGLQILFSSNPTAVIPQGYVKNVEVLMVHTIGKIKSAL 685


>gi|197116199|dbj|BAG68839.1| homeodomain-containing transcription factor FWA [Arabidopsis
           arenosa]
          Length = 689

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 259/701 (36%), Positives = 392/701 (55%), Gaps = 46/701 (6%)

Query: 71  SGSENHEG-----ASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
           SG+EN EG     A+  + +Q     +R HRHT +Q QE+E F+ E   P + QR EL +
Sbjct: 18  SGAENGEGDHMIDATSGNNDQDGGSMRRNHRHTAYQTQELENFYLENSLPTEDQRYELGQ 77

Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGG 185
            L +EP QVKFWFQNKR QMK   +R EN  LR ++++L     + R A+  +SC  CG 
Sbjct: 78  RLNMEPKQVKFWFQNKRCQMKINSDRLENITLREDHDRLLVTQHQLRSAMLQSSCNICGR 137

Query: 186 PTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVG 245
            T  G++ ++   L +ENA+L  EID+     +K    P  N  L+SP  P+     +  
Sbjct: 138 ATHCGDIDYEVQILMVENAKLEREIDQ---YYSKIRSHP--NQMLVSPSQPAPHCSSSNP 192

Query: 246 NFGAQP--GIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLW-M 302
              A P  G+GGG            +  TE ++ M + LA+ A++ELI +     P   +
Sbjct: 193 GINATPELGLGGG------------TRATEKERSMFLNLAITALKELIELEAKHRPFGKI 240

Query: 303 TSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWST 362
            S    A  L  ++Y       I  KP G   EASR+T +V M  ++LV+  MD  +W  
Sbjct: 241 DSRSSKAVSLIYEKYENASNNVI--KPPGHVVEASRDTGLVPMTCLTLVKTFMDTGKWVN 298

Query: 363 VFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTW 422
           VF+ IV  A T +V+ TG  G  +G+LQ++ AEFQ+ SPLVP R+  ++RYCK+  +G W
Sbjct: 299 VFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQIISPLVPKRQVTFLRYCKELRQGFW 358

Query: 423 AVVDVSLDNLRPSPAVR----CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQ 478
            VVDV+ D    +P +       R PSG  I++M NGYS+VTW+E  E ++  +H LY+ 
Sbjct: 359 VVVDVTPDQ---NPTLLSDGGSNRLPSGVFIEDMANGYSQVTWIEQAEYNESHIHPLYQP 415

Query: 479 LVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISF 538
           L+ +G   GA RW+ATL R C+ ++++ +TN+   E+    + +G   ++KLA+RM +++
Sbjct: 416 LIGSGIGLGATRWLATLQRHCDSISTLSSTNL--AEISPGLSAEGAAEVVKLAQRMTLNY 473

Query: 539 CAGVSASTAHTWTTLSGTG-ADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFD 597
            +G+ +S+ + W  +     A ++  M RK++++PG   GI+LSAATS W PV  K +F 
Sbjct: 474 YSGIMSSSGNKWEKIQVEDVAPNLSFMIRKNLNEPGEFSGILLSAATSVWFPVNQKALFA 533

Query: 598 FLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQES 657
           FL + + R EWD L +   ++E   I   +  GN +SLL+           + ML+LQE 
Sbjct: 534 FLSNPSFRHEWDTLIHNTTMEETIRIQKAKRHGNIISLLKAG---------NGMLVLQEI 584

Query: 658 CTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGS 717
             D + + ++YAPV+  ++  V  GG+ D+V LLPSGF+I+PDG             GG 
Sbjct: 585 WNDASGAMLVYAPVETNSIEWVKRGGESDHVQLLPSGFSIMPDGVPDRKGKSKTGGGGGC 644

Query: 718 LLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           LLT   Q+L    PTA+L  G V TV  L+  T+ +IK++L
Sbjct: 645 LLTFGVQLLFSRNPTAELPQGYVKTVEVLMVHTIGKIKSAL 685


>gi|197116195|dbj|BAG68837.1| homeodomain-containing transcription factor FWA [Arabidopsis
           halleri subsp. gemmifera]
          Length = 689

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 266/714 (37%), Positives = 396/714 (55%), Gaps = 53/714 (7%)

Query: 64  EEFDST-----KSGSENHEG-----ASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECP 113
           ++FD+       SG+EN E      A+  D +Q   + +R HRHT +Q QE+E  + E P
Sbjct: 6   DDFDAVGNIPNPSGAENGESDHMIDATSGDNDQDGGRMRRAHRHTAYQTQELENVYLENP 65

Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYRE 173
            P + QR EL + L +EP QVKFWFQNKR QMK   +R EN  LR ++++L     + R 
Sbjct: 66  LPTEDQRYELGQRLNMEPKQVKFWFQNKRNQMKINSDRLENIILREDHDRLLLTQHQLRS 125

Query: 174 ALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSP 233
           A+ + SC  CG  T  G++ ++   L +EN  L  EI++   + +K   +P  N  L+S 
Sbjct: 126 AMLHCSCNICGRATNCGDIDYEVQKLIVENTILEREINQ---LYSKIPSRP--NQMLVS- 179

Query: 234 PVPSRPLELAVGNFG--AQP--GIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEE 289
             PS+P   +  N G  A P  G+GGG            +  TE ++ M ++LA+ A++E
Sbjct: 180 --PSQPPHCSSSNPGINATPELGLGGG------------TRTTEKERSMFLDLAIKALKE 225

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHIS 349
           L+ + +M  P        + AV   +E  +     +  KP G   EASRE  +V M  ++
Sbjct: 226 LLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNV-TKPPGHVVEASREIGLVPMTCLT 284

Query: 350 LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESY 409
           LV+  MD  +W  VF+ IV  A T +V+ TG  G  +G+LQ + AEFQV SPLVP R+  
Sbjct: 285 LVKTFMDTEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQAEFQVISPLVPKRQVT 344

Query: 410 YVRYCKQHGEGTWAVVDVSLDNLRPSPAVR----CRRRPSGCLIQEMPNGYSKVTWVEHV 465
           ++RYCK+   G W VVDV+ D    +P +       R PSG  I +M NGYS+VTW+E  
Sbjct: 345 FLRYCKELRHGLWVVVDVTPDQ---NPTLLSYGGSNRLPSGLFIADMANGYSQVTWIEQA 401

Query: 466 EVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK 525
           E ++  +H LY+ L+ +G   GA RW+ATL R CE L+++ +TN+   E+    +  G  
Sbjct: 402 EYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNL--AEISPGLSAKGAA 459

Query: 526 SMLKLAERMVISFCAGVSASTAHTWTTLSGTG-ADDVRVMTRKSVDDPGRPPGIVLSAAT 584
            ++KLA+RM +++  G+++S+   W  +     A ++  M RK+V++PG   GI+LSAAT
Sbjct: 460 EVVKLAQRMTLNYYTGITSSSGDKWEKIQVENVAPNMSFMIRKNVNEPGEHSGILLSAAT 519

Query: 585 SFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSA 644
           S W PV  K +F FL + + R EWD L+N   ++E   I   +  GN +SLL++      
Sbjct: 520 SVWFPVNQKTLFAFLSNPSFRHEWDTLTNNTRMEETIRIQKAKRHGNIISLLKI------ 573

Query: 645 NSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSL 704
               ++ L+LQE   D + + V+YAPV+   M  V  GG+ D V LLPSGF+I+PDG   
Sbjct: 574 --VGNDTLVLQEIWNDASGAMVVYAPVETNPMEWVKRGGNSDSVQLLPSGFSIMPDGVPD 631

Query: 705 HGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
                     GGSL+T   QIL  S PTA +  G V  V  L+  T+ +IK++L
Sbjct: 632 RKGKSKNGGGGGSLVTFGLQILFSSNPTAVIPQGYVKNVEVLMVHTIGKIKSAL 685


>gi|197116193|dbj|BAG68836.1| homeodomain-containing transcription factor FWA [Arabidopsis
           halleri subsp. gemmifera]
          Length = 689

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 266/714 (37%), Positives = 396/714 (55%), Gaps = 53/714 (7%)

Query: 64  EEFDST-----KSGSENHEG-----ASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECP 113
           ++FD+       SG+EN E      A+  D +Q   + +R HRHT +Q QE+E  + E P
Sbjct: 6   DDFDAVGNIPNPSGAENGESDHMIDATSGDNDQDGGRMRRAHRHTAYQTQELENVYLENP 65

Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYRE 173
            P + QR EL + L +EP QVKFWFQNKR QMK   +R EN  LR ++++L     + R 
Sbjct: 66  LPTEDQRYELGQRLNMEPKQVKFWFQNKRNQMKINSDRLENIILREDHDRLLLTQHQLRS 125

Query: 174 ALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSP 233
           A+ + SC  CG  T  G++ ++   L +EN  L  EI++   + +K   +P  N  L+S 
Sbjct: 126 AMLHCSCNICGRATNCGDIDYEVQKLIVENTILEREINQ---LYSKIPSRP--NQMLVS- 179

Query: 234 PVPSRPLELAVGNFG--AQP--GIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEE 289
             PS+P   +  N G  A P  G+GGG            +  TE ++ M ++LA+ A++E
Sbjct: 180 --PSQPPHCSSSNPGINATPELGLGGG------------TRTTEKERSMFLDLAIKALKE 225

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHIS 349
           L+ + +M  P        + AV   +E  +     +  KP G   EASRE  +V M  ++
Sbjct: 226 LLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNV-TKPPGHVVEASREIGLVPMTCLT 284

Query: 350 LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESY 409
           LV+  MD  +W  VF+ IV  A T +V+ TG  G  +G+LQ + AEFQV SPLVP R+  
Sbjct: 285 LVKTFMDTEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQAEFQVISPLVPKRQVT 344

Query: 410 YVRYCKQHGEGTWAVVDVSLDNLRPSPAVR----CRRRPSGCLIQEMPNGYSKVTWVEHV 465
           ++RYCK+   G W VVDV+ D    +P +       R PSG  I +M NGYS+VTW+E  
Sbjct: 345 FLRYCKELRHGLWVVVDVTPDQ---NPTLLSYGGSNRLPSGLFIADMANGYSQVTWIEQA 401

Query: 466 EVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK 525
           E ++  +H LY+ L+ +G   GA RW+ATL R CE L+++ +TN+   E+    +  G  
Sbjct: 402 EYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNL--AEISPGLSAKGAA 459

Query: 526 SMLKLAERMVISFCAGVSASTAHTWTTLSGTG-ADDVRVMTRKSVDDPGRPPGIVLSAAT 584
            ++KLA+RM +++  G+++S+   W  +     A ++  M RK+V++PG   GI+LSAAT
Sbjct: 460 EVVKLAQRMTLNYYTGITSSSGDKWEKIQIENVAPNMSFMIRKNVNEPGEHSGILLSAAT 519

Query: 585 SFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSA 644
           S W PV  K +F FL + + R EWD L+N   ++E   I   +  GN +SLL++      
Sbjct: 520 SVWFPVNQKTLFAFLSNPSFRHEWDTLTNNTRMEETIRIQKAKRHGNIISLLKI------ 573

Query: 645 NSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSL 704
               ++ L+LQE   D + + V+YAPV+   M  V  GG+ D V LLPSGF+I+PDG   
Sbjct: 574 --VGNDTLVLQEIWNDASGAMVVYAPVETNPMEWVKRGGNSDSVQLLPSGFSIMPDGVPD 631

Query: 705 HGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
                     GGSL+T   QIL  S PTA +  G V  V  L+  T+ +IK++L
Sbjct: 632 RKGKSKNGGGGGSLVTFGLQILFSSNPTAVIPQGYVKNVEVLMVHTIGKIKSAL 685


>gi|413952729|gb|AFW85378.1| hypothetical protein ZEAMMB73_822854 [Zea mays]
          Length = 548

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/507 (48%), Positives = 339/507 (66%), Gaps = 29/507 (5%)

Query: 272 TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTA-AVLNEDEYVRTFPR-GIGPKP 329
           TE ++PM++++A  AM+ELIR+AQ GE +W+  + G A  VL+   Y   F + G   +P
Sbjct: 50  TEMERPMMVDMATRAMDELIRLAQAGEQIWVQGMPGDAREVLDVATYDSLFAKPGGAFRP 109

Query: 330 TGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGAL 389
                E SR++ +V M+ ++LV++ MD N+W   F GIVS+A T++VL  G+ G  + +L
Sbjct: 110 PEINVEGSRDSGLVFMSAVALVDVFMDTNKWMEFFPGIVSKAQTVDVLVNGLCGR-SESL 168

Query: 390 QVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR------PSPAVRCRRR 443
            +M  E  + +P+VPTRE  ++RYCKQ  +G WAV DVSLD  R      PS   R RR 
Sbjct: 169 IMMYEELHIMTPVVPTRELSFLRYCKQIEQGLWAVADVSLDGQRDAHYGVPS---RSRRM 225

Query: 444 PSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQLVSTGNAFGAKRWVATLDRQCERL 502
           PSGCLI +M NGYSKVTWVEH+E++    ++ LY+ LV +G AFGA RW+A L R CER 
Sbjct: 226 PSGCLIADMSNGYSKVTWVEHLEIEHMLPINVLYRNLVLSGAAFGAHRWLAALQRACERF 285

Query: 503 ASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVR 562
           AS+    +P  +V  +T  +G++SM++L++RMV SFCA +S+S    WT LSGT    V 
Sbjct: 286 ASLATLGVPHHDVAGVT-PEGKRSMMRLSQRMVSSFCASLSSSPLQRWTLLSGTTDVSVC 344

Query: 563 VMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAH 622
           V T +S D  G+P G+VLSAATS WLPVP   VF F+RDEN RS+WD+LS+G  VQE++ 
Sbjct: 345 VSTHRSTDS-GQPNGVVLSAATSIWLPVPGDHVFAFVRDENARSQWDVLSHGNQVQEVSR 403

Query: 623 IANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNG 682
           I NG + GNC+SLLR       N++Q++MLILQESC D + + V+Y+P+DI A NVV++G
Sbjct: 404 IPNGSNPGNCISLLR-----GLNANQNSMLILQESCADASGALVVYSPIDIPAANVVMSG 458

Query: 683 GDPDYVALLPSGFAILPDG---------TSLHGANIGEAASGGSLLTVAFQILVDSVPTA 733
            DP  + LLPSGFAILPDG         +S            G ++TVAFQILV ++P++
Sbjct: 459 EDPSGIPLLPSGFAILPDGRPGSSGAGASSSAVPLAAAPPPPGCVVTVAFQILVSNLPSS 518

Query: 734 KLSLGSVATVNNLIACTVERIKASLSC 760
           +L+  SVATVN+LI  TV++IKA+L+C
Sbjct: 519 RLNAESVATVNSLIGTTVQQIKAALNC 545


>gi|197116197|dbj|BAG68838.1| homeodomain-containing transcription factor FWA [Arabidopsis
           halleri subsp. halleri]
          Length = 671

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 259/689 (37%), Positives = 385/689 (55%), Gaps = 43/689 (6%)

Query: 79  ASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWF 138
           A+  D +Q   + +R HRHT +Q QE+E F+ E P P + QR EL + L +EP QVKFWF
Sbjct: 13  ATSGDNDQDGGRMRRAHRHTAYQTQELENFYLENPLPTEDQRYELGQRLNMEPKQVKFWF 72

Query: 139 QNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHH 198
           QNKR QMK   +R EN  LR ++++L     + R A+   SC  CG  T  G++ ++   
Sbjct: 73  QNKRNQMKINSDRLENITLREDHDRLLLTQHQLRSAMLYCSCNICGRATNCGDIDYEVQK 132

Query: 199 LRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFG--AQP--GIG 254
           L +EN  L  EI++   + +K   +P  N  L+S   PS+P   +  N G  A P  G+G
Sbjct: 133 LIVENTILEREINQ---LYSKIPSRP--NQMLVS---PSQPPHCSSSNPGINATPELGLG 184

Query: 255 GGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNE 314
           GG            +  TE ++ M ++LA+ A++EL+ + +M  P        + AV   
Sbjct: 185 GG------------TRTTEKERSMFLDLAIKALKELLELGEMDCPFGKIDSRSSKAVSLI 232

Query: 315 DEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTL 374
           +E  +     +  KP G   EASRE  +V M  ++LV+  MD  +W  VF+ IV  A T 
Sbjct: 233 NEKYKNASNNV-TKPPGHVVEASREIGLVPMTCLTLVKTFMDTEKWVDVFASIVPVASTR 291

Query: 375 EVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP 434
           +V+ TG  G  +G+LQ + AEFQV SPLVP R+  ++RYCK+   G W VVDV+ D    
Sbjct: 292 KVIPTGSGGTKSGSLQQIQAEFQVISPLVPKRQVTFLRYCKELRHGLWVVVDVTPDK--- 348

Query: 435 SPAVR----CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKR 490
           +P +       R PSG  I +M NGYS+VTW+E  E ++  +H LY+ L+ +G   GA R
Sbjct: 349 NPTLLSYGGSNRLPSGLFIADMANGYSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATR 408

Query: 491 WVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTW 550
           W+ATL R CE L+++ +TN+   E+    +  G   ++KLA+RM +++  G+++S+   W
Sbjct: 409 WLATLQRHCESLSTLSSTNL--AEISPGLSAKGAAEVVKLAQRMTLNYYTGITSSSGDKW 466

Query: 551 TTLSGTG-ADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWD 609
             +     A ++  M RK++++PG   GI+LSAATS W PV  K +F FL + + R EWD
Sbjct: 467 EKIQVENVAPNMGFMIRKNLNEPGEHSGILLSAATSVWFPVNQKTLFAFLSNPSFRHEWD 526

Query: 610 ILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYA 669
            L+N   ++E   I   +  GN +SLL++          ++ L+LQE   D + + V+YA
Sbjct: 527 TLTNNTRMEETIRIQKAKRHGNIISLLKI--------VGNDTLVLQEIWNDASGAMVVYA 578

Query: 670 PVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDS 729
           PV+   M  V  GG+ D V LLPSGF+I+PDG             GGSL+T   QIL  S
Sbjct: 579 PVETNPMEWVKRGGNSDSVQLLPSGFSIMPDGVPDRKGKSKNGGGGGSLVTFGLQILFSS 638

Query: 730 VPTAKLSLGSVATVNNLIACTVERIKASL 758
            PTA +  G V  V  L+  T+ +IK++L
Sbjct: 639 NPTAVIPQGYVKNVEVLMVHTIGKIKSAL 667


>gi|197116133|dbj|BAG68844.1| homeodomain-containing transcription factor FWA [Arabidopsis
           suecica]
          Length = 689

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 260/713 (36%), Positives = 398/713 (55%), Gaps = 51/713 (7%)

Query: 64  EEFDST-----KSGSENHEG-----ASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECP 113
           ++FD+       SG++N E      A+  + +Q   + +R HRHT +QIQE+E F+ E  
Sbjct: 6   DDFDAVGNIPNPSGADNGESDHMIDAASGNNDQDGGRMRRNHRHTAYQIQELENFYLENS 65

Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYRE 173
            P + QR EL + L +EP QVKFWFQNKR QMK   +R EN  LR ++++L     + R 
Sbjct: 66  LPTEDQRYELGQRLNMEPKQVKFWFQNKRCQMKINSDRLENITLREDHDRLLVTQHQLRS 125

Query: 174 ALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSP 233
           A+ ++ C  CG  T  G++ ++   L +ENA+L  EID+     +K    P  N  L+SP
Sbjct: 126 AMLHSLCNICGRATHCGDIDYEMQILMVENAKLEREIDQ---YYSKIRSHP--NQMLVSP 180

Query: 234 PVPSRPLELAVGNFGAQP--GIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELI 291
             P+     +     A P  G+GGG            +  TE ++ M + LA+ A++ELI
Sbjct: 181 SQPAPHCSSSNPGINATPELGLGGG------------TRATEKERSMFLNLAITALKELI 228

Query: 292 RMAQMGEPLWMTSLDGTAAV-LNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISL 350
            +     P        + AV L  ++Y       I  KP G   EASR+T +V M  ++L
Sbjct: 229 ELEAKHCPFGKIDSGSSKAVSLIYEKYENASNNVI--KPPGHVVEASRDTGLVPMTCLTL 286

Query: 351 VEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYY 410
           V+  MD  +W  VF+ IV  A T +V+ TG  G  +G+LQ++ AEFQ+ SPLVP R+  +
Sbjct: 287 VKTFMDTGKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQIISPLVPKRQVTF 346

Query: 411 VRYCKQHGEGTWAVVDVSLDNLRPSPAVR----CRRRPSGCLIQEMPNGYSKVTWVEHVE 466
           +RYCK+  +G W VVDV+ D    +P +       R PSG  I++M NGYSKVTW+E  E
Sbjct: 347 LRYCKELRQGFWVVVDVTPDQ---NPTLLSNGGSNRLPSGLFIEDMANGYSKVTWIEQAE 403

Query: 467 VDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS 526
            ++  +H LY+ L+ +G   GA RW+ATL R C+ ++++ +TN+   E+    + +G   
Sbjct: 404 YNESHIHPLYQPLIGSGIGLGATRWLATLQRHCDSISTLSSTNL--AEISPGLSAEGAAE 461

Query: 527 MLKLAERMVISFCAGVSASTAHTWTTLSGTG-ADDVRVMTRKSVDDPGRPPGIVLSAATS 585
           ++KLA+RM +++ +G+ +S+ + W  +     A ++  M RK++++PG   GI+LSAATS
Sbjct: 462 VVKLAQRMTLNYYSGIMSSSGNKWEKIQVEDVAPNLSFMIRKNLNEPGEFSGILLSAATS 521

Query: 586 FWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSAN 645
            W PV  K +F FL + + R EWD L +   ++E   I   +  GN +SLL+        
Sbjct: 522 VWFPVNQKALFAFLSNPSFRHEWDTLIHNTTMEETIRIQKAKRHGNIISLLKAG------ 575

Query: 646 SSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH 705
              + ML+LQE   D + + ++YAPV+  ++  V  GG+ D+V LLPSGF+I+PDG    
Sbjct: 576 ---NGMLVLQEIWNDASGAMLVYAPVETNSIEWVKRGGESDHVQLLPSGFSIMPDGVPDR 632

Query: 706 GANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
                    GG LLT   Q+L    PTA+L  G V TV  L+  T+ +IK++L
Sbjct: 633 KGKSKTGGGGGCLLTFGVQLLFSRNPTAELPQGYVKTVEVLMVHTIGKIKSAL 685


>gi|197116163|dbj|BAG68830.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
          Length = 686

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 254/683 (37%), Positives = 379/683 (55%), Gaps = 36/683 (5%)

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           +Q   + +R HR T +Q QE+E F+ E PHP ++QR EL + L +   QVK WFQNKR  
Sbjct: 35  DQDGGRMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNL 94

Query: 145 MKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            K  ++  EN  LR E+++L A   + R A+  + C  CG  T  G+  ++   L  ENA
Sbjct: 95  EKINNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEYEVQKLMAENA 154

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL 264
            L  EID+ +   ++Y+  P       S   PS           + PGI    +   +  
Sbjct: 155 NLEREIDQFN---SRYLSHPKQRMVSTSEQAPSS---------SSNPGINATPVLDFSGG 202

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTS-LDGTAAVLNEDEYVRTFPR 323
            R+    TE +  + + LA+ A+ ELI + ++  P WM   +  +  V    E  R+   
Sbjct: 203 TRT----TEKETSIFLNLAITALRELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFN 258

Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
            +  KP G   EASR   +V M  ++LV+ LMD  +W  VF+ IV  A T +VLSTG  G
Sbjct: 259 NV-TKPPGQIVEASRAKGLVPMTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVLSTGSGG 317

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS-LDNLRPSPAVRCRR 442
             +G+LQ + AEFQV SPLVP R+  ++RYCK+  +G W VVDV+   N    P    +R
Sbjct: 318 TKSGSLQQIQAEFQVISPLVPKRKVTFIRYCKEIRQGLWVVVDVTPTQNPTLLPYGCSKR 377

Query: 443 RPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERL 502
            PSG +I ++ NGYS+VTW+E  E ++  +H LY+ L+  G   GAKRW+ATL R CE L
Sbjct: 378 LPSGLIIDDLSNGYSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESL 437

Query: 503 ASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTG-ADDV 561
           +++ +TN+   E+    +  G   ++KLA+RM +++  G+++ +   W  +     A ++
Sbjct: 438 STLSSTNLT--EISPGLSAKGATEIVKLAQRMTLNYYRGITSPSVDKWQKIQVENVAQNM 495

Query: 562 RVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMA 621
             M RK+V++PG   GIVLSA+TS WLPV    +F F+   + R EWDIL+N   ++E  
Sbjct: 496 SFMIRKNVNEPGELTGIVLSASTSVWLPVNQHTLFAFISHLSFRHEWDILTNDTTMEETI 555

Query: 622 HIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLN 681
            I   +  GN +SLL++          + ML+LQE   D + + V+YAPV+  ++ +V  
Sbjct: 556 RIQKAKRHGNIISLLKI--------VNNGMLVLQEIWNDASGAMVVYAPVETNSIELVKR 607

Query: 682 GGDPDYVALLPSGFAILPDGT--SLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGS 739
           G + D V  LPSGF+I+PDG   S H  N G    GG LLT   QILV   PTA L  G+
Sbjct: 608 GENSDSVKFLPSGFSIVPDGVNGSYHRGNTG----GGCLLTFGLQILVGINPTAALIQGT 663

Query: 740 VATVNNLIACTVERIKASLSCES 762
           V +V  L+A T+ +IK++L  ++
Sbjct: 664 VKSVETLMAHTIVKIKSALDLQT 686


>gi|197116139|dbj|BAG68821.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
          Length = 686

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/683 (36%), Positives = 380/683 (55%), Gaps = 36/683 (5%)

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           +Q   + +R HR T +Q QE+E F+ E PHP ++QR EL + L +   QVK WFQNKR  
Sbjct: 35  DQDGGRMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNL 94

Query: 145 MKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            K  ++  EN  LR E+++L A   + R A+  + C  CG  T  G   ++   L  ENA
Sbjct: 95  EKINNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGNTEYEVQKLMAENA 154

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL 264
            L  EID+ +   ++Y+ +P       S   PS           + PGI    +   +  
Sbjct: 155 NLEREIDQFN---SRYLSRPKQRLVSTSEQAPSS---------SSNPGINATPVLDFSGG 202

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTS-LDGTAAVLNEDEYVRTFPR 323
            R+    +E +  + + LA+ A+ ELI + ++  P WM   +  +  V    E  R+   
Sbjct: 203 TRT----SEKETSIFLNLAITALRELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFN 258

Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
            +  KP G   EASR   +V M  ++LV+ LMD  +W  VF+ IV  A T +V+STG  G
Sbjct: 259 NV-TKPPGQIVEASRAKGLVPMTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVISTGSGG 317

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS-LDNLRPSPAVRCRR 442
             +G+LQ + AEFQV SPLVP R+  ++RYCK+  +G W VVDV+   N    P    +R
Sbjct: 318 TKSGSLQQIQAEFQVISPLVPKRKVTFIRYCKEIRQGLWVVVDVTPTQNPTLLPYGCSKR 377

Query: 443 RPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERL 502
            PSG +I ++ NGYS+VTW+E  E ++  +H LY+ L+  G   GAKRW+ATL R CE L
Sbjct: 378 LPSGLIIDDLSNGYSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESL 437

Query: 503 ASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTG-ADDV 561
           +++ +TN+   E+    +  G   ++KLA+RM +++  G+++ +   W  +     A ++
Sbjct: 438 STLSSTNLT--EISPGLSAKGATEIVKLAQRMTLNYYRGITSPSVDKWQKIQVENVAQNM 495

Query: 562 RVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMA 621
             M RK+V++PG   GIVLSA+TS WLPV    +F F+   + R EWDIL+N   ++E  
Sbjct: 496 SFMIRKNVNEPGELTGIVLSASTSVWLPVNQHTLFAFISHLSFRHEWDILTNDTTMEETI 555

Query: 622 HIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLN 681
            I   +  GN +SLL++          + ML+LQE   D + + V+YAPV+  ++ +V  
Sbjct: 556 RIQKAKRHGNIISLLKI--------VNNGMLVLQEIWNDASGAMVVYAPVETNSIELVKR 607

Query: 682 GGDPDYVALLPSGFAILPDGT--SLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGS 739
           G + D V  LPSGF+I+PDG   S H  N G    GG LLT   QILV + PTA L  G+
Sbjct: 608 GENSDSVKFLPSGFSIVPDGVNGSYHRGNXG----GGCLLTFGLQILVGTNPTAALIQGT 663

Query: 740 VATVNNLIACTVERIKASLSCES 762
           V +V  L+A T+ +IK++L  ++
Sbjct: 664 VKSVETLMAHTIVKIKSALDLQT 686


>gi|197116165|dbj|BAG68831.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
          Length = 686

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 253/686 (36%), Positives = 380/686 (55%), Gaps = 42/686 (6%)

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           +Q   + +R HR T +Q QE+E F+ E PHP ++QR EL + L +   QVK WFQNKR  
Sbjct: 35  DQDGGRMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNL 94

Query: 145 MKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            K  ++  EN  LR E+++L A   + R A+  + C  CG  T  G+  ++   L  ENA
Sbjct: 95  EKINNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEYEVQKLMAENA 154

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL 264
            L  EID+ +   ++Y+  P       S   PS           + PGI    +   +  
Sbjct: 155 NLEREIDQFN---SRYLSHPKQRMVSTSEQAPSS---------SSNPGINATPVLDFSGG 202

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTS----LDGTAAVLNEDEYVRT 320
            R+    +E +  + + LA+ A+ ELI + ++  P WM        G + +   ++Y  +
Sbjct: 203 TRT----SEKETSIFLNLAITALRELITLGEVDCPFWMIDPIVRSKGVSKIY--EKYRSS 256

Query: 321 FPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTG 380
           F      KP G   EASR   +V M  ++LV+ LMD  +W  VF+ IV  A T +VLSTG
Sbjct: 257 FNNVT--KPPGQIVEASRAKGLVPMTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVLSTG 314

Query: 381 VAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS-LDNLRPSPAVR 439
             G  +G+LQ + AEFQV SPLVP R+  ++RYCK+  +G W VVDV+   N    P   
Sbjct: 315 SGGTKSGSLQQIQAEFQVISPLVPKRKVTFIRYCKEIRQGLWVVVDVTPTQNPTLLPYGC 374

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
            +R PSG +I ++ NGYS+VTW+E  E ++  +H LY+ L+  G   GAKRW+ATL R C
Sbjct: 375 SKRLPSGLIIDDLSNGYSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHC 434

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTG-A 558
           E L+++ +TN+   E+    +  G   ++KLA+RM +++  G+++ +   W  +     A
Sbjct: 435 ESLSTLSSTNLT--EISPGLSAKGATEIVKLAQRMTLNYYRGITSPSVDKWQKIQVENVA 492

Query: 559 DDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQ 618
            ++  M RK+V++PG   GIVLSA+TS WLPV    +F F+   + R EWDIL+N   ++
Sbjct: 493 QNMSFMIRKNVNEPGELTGIVLSASTSVWLPVNQHTLFAFISHLSFRHEWDILTNDTTME 552

Query: 619 EMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNV 678
           E   I   +  GN +SLL++          + ML+LQE   D + + V+YAPV+  ++ +
Sbjct: 553 ETIQIQKAKRHGNIISLLKI--------VNNGMLVLQEIWNDASGAMVVYAPVETNSIEL 604

Query: 679 VLNGGDPDYVALLPSGFAILPDGT--SLHGANIGEAASGGSLLTVAFQILVDSVPTAKLS 736
           V  G + D V  LPSGF+I+PDG   S H  N G    GG LLT   QILV   PTA L 
Sbjct: 605 VKRGENSDSVKFLPSGFSIVPDGVNGSYHRGNTG----GGCLLTFGLQILVGINPTAALI 660

Query: 737 LGSVATVNNLIACTVERIKASLSCES 762
            G+V +V  L+A T+ +IK++L  ++
Sbjct: 661 QGTVKSVETLMAHTIVKIKSALDLQT 686


>gi|18416569|ref|NP_567722.1| homeobox-leucine zipper protein HDG6 [Arabidopsis thaliana]
 gi|187608874|sp|Q9FVI6.2|FWA_ARATH RecName: Full=Homeobox-leucine zipper protein HDG6; AltName:
           Full=HD-ZIP protein HDG6; AltName: Full=Homeobox protein
           FWA; AltName: Full=Homeodomain GLABRA 2-like protein 6;
           AltName: Full=Homeodomain transcription factor HDG6;
           AltName: Full=Protein HOMEODOMAIN GLABROUS 6
 gi|197116099|dbj|BAG68818.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116131|dbj|BAG68843.1| homeodomain-containing transcription factor FWA [Arabidopsis
           suecica]
 gi|197116137|dbj|BAG68820.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116145|dbj|BAG68824.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116153|dbj|BAG68828.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|332659674|gb|AEE85074.1| homeobox-leucine zipper protein HDG6 [Arabidopsis thaliana]
          Length = 686

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 253/683 (37%), Positives = 379/683 (55%), Gaps = 36/683 (5%)

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           +Q   + +R HR T +Q QE+E F+ E PHP ++QR EL + L +   QVK WFQNKR  
Sbjct: 35  DQDGGRMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNL 94

Query: 145 MKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            K  ++  EN  LR E+++L A   + R A+  + C  CG  T  G+  ++   L  ENA
Sbjct: 95  EKINNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEYEVQKLMAENA 154

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL 264
            L  EID+ +   ++Y+  P       S   PS           + PGI    +   +  
Sbjct: 155 NLEREIDQFN---SRYLSHPKQRMVSTSEQAPSS---------SSNPGINATPVLDFSGG 202

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTS-LDGTAAVLNEDEYVRTFPR 323
            R+    +E +  + + LA+ A+ ELI + ++  P WM   +  +  V    E  R+   
Sbjct: 203 TRT----SEKETSIFLNLAITALRELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFN 258

Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
            +  KP G   EASR   +V M  ++LV+ LMD  +W  VF+ IV  A T +VLSTG  G
Sbjct: 259 NV-TKPPGQIVEASRAKGLVPMTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVLSTGSGG 317

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS-LDNLRPSPAVRCRR 442
             +G+LQ + AEFQV SPLVP R+  ++RYCK+  +G W VVDV+   N    P    +R
Sbjct: 318 TKSGSLQQIQAEFQVISPLVPKRKVTFIRYCKEIRQGLWVVVDVTPTQNPTLLPYGCSKR 377

Query: 443 RPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERL 502
            PSG +I ++ NGYS+VTW+E  E ++  +H LY+ L+  G   GAKRW+ATL R CE L
Sbjct: 378 LPSGLIIDDLSNGYSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESL 437

Query: 503 ASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTG-ADDV 561
           +++ +TN+   E+    +  G   ++KLA+RM +++  G+++ +   W  +     A ++
Sbjct: 438 STLSSTNLT--EISPGLSAKGATEIVKLAQRMTLNYYRGITSPSVDKWQKIQVENVAQNM 495

Query: 562 RVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMA 621
             M RK+V++PG   GIVLSA+TS WLPV    +F F+   + R EWDIL+N   ++E  
Sbjct: 496 SFMIRKNVNEPGELTGIVLSASTSVWLPVNQHTLFAFISHLSFRHEWDILTNDTTMEETI 555

Query: 622 HIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLN 681
            I   +  GN +SLL++          + ML+LQE   D + + V+YAPV+  ++ +V  
Sbjct: 556 RIQKAKRHGNIISLLKI--------VNNGMLVLQEIWNDASGAMVVYAPVETNSIELVKR 607

Query: 682 GGDPDYVALLPSGFAILPDGT--SLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGS 739
           G + D V  LPSGF+I+PDG   S H  N G    GG LLT   QILV   PTA L  G+
Sbjct: 608 GENSDSVKFLPSGFSIVPDGVNGSYHRGNTG----GGCLLTFGLQILVGINPTAALIQGT 663

Query: 740 VATVNNLIACTVERIKASLSCES 762
           V +V  L+A T+ +IK++L  ++
Sbjct: 664 VKSVETLMAHTIVKIKSALDLQT 686


>gi|9957277|gb|AAG09302.1| homeobox protein [Arabidopsis thaliana]
 gi|13506820|gb|AAK28350.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116135|dbj|BAG68819.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116141|dbj|BAG68822.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116143|dbj|BAG68823.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116147|dbj|BAG68825.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116149|dbj|BAG68826.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116161|dbj|BAG68829.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
          Length = 686

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 252/683 (36%), Positives = 379/683 (55%), Gaps = 36/683 (5%)

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           +Q   + +R HR T +Q QE+E F+ E PHP ++QR EL + L +   QVK WFQNKR  
Sbjct: 35  DQDGGRMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNL 94

Query: 145 MKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            K  ++  EN  LR E+++L A   + R A+  + C  CG  T  G+  ++   L  ENA
Sbjct: 95  EKINNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEYEVQKLMAENA 154

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL 264
            L  EID+ +   ++Y+  P       S   PS           + PGI    +   +  
Sbjct: 155 NLEREIDQFN---SRYLSHPKQRMVSTSEQAPSS---------SSNPGINATPVLDFSGG 202

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTS-LDGTAAVLNEDEYVRTFPR 323
            R+    +E +  + + LA+ A+ ELI + ++  P WM   +  +  V    E  R+   
Sbjct: 203 TRT----SEKETSIFLNLAITALRELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFN 258

Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
            +  KP G   EASR   +V M  ++LV+ LMD  +W  VF+ IV  A T +V+STG  G
Sbjct: 259 NV-TKPPGQIVEASRAKGLVPMTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVISTGSGG 317

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS-LDNLRPSPAVRCRR 442
             +G+LQ + AEFQV SPLVP R+  ++RYCK+  +G W VVDV+   N    P    +R
Sbjct: 318 TKSGSLQQIQAEFQVISPLVPKRKVTFIRYCKEIRQGLWVVVDVTPTQNPTLLPYGCSKR 377

Query: 443 RPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERL 502
            PSG +I ++ NGYS+VTW+E  E ++  +H LY+ L+  G   GAKRW+ATL R CE L
Sbjct: 378 LPSGLIIDDLSNGYSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESL 437

Query: 503 ASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTG-ADDV 561
           +++ +TN+   E+    +  G   ++KLA+RM +++  G+++ +   W  +     A ++
Sbjct: 438 STLSSTNLT--EISPGLSAKGATEIVKLAQRMTLNYYRGITSPSVDKWQKIQVENVAQNM 495

Query: 562 RVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMA 621
             M RK+V++PG   GIVLSA+TS WLPV    +F F+   + R EWDIL+N   ++E  
Sbjct: 496 SFMIRKNVNEPGELTGIVLSASTSVWLPVNQHTLFAFISHLSFRHEWDILTNDTTMEETI 555

Query: 622 HIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLN 681
            I   +  GN +SLL++          + ML+LQE   D + + V+YAPV+  ++ +V  
Sbjct: 556 RIQKAKRHGNIISLLKI--------VNNGMLVLQEIWNDASGAMVVYAPVETNSIELVKR 607

Query: 682 GGDPDYVALLPSGFAILPDGT--SLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGS 739
           G + D V  LPSGF+I+PDG   S H  N G    GG LLT   QILV   PTA L  G+
Sbjct: 608 GENSDSVKFLPSGFSIVPDGVNGSYHRGNTG----GGCLLTFGLQILVGINPTAALIQGT 663

Query: 740 VATVNNLIACTVERIKASLSCES 762
           V +V  L+A T+ +IK++L  ++
Sbjct: 664 VKSVETLMAHTIVKIKSALDLQT 686


>gi|357448571|ref|XP_003594561.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355483609|gb|AES64812.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 694

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 258/711 (36%), Positives = 400/711 (56%), Gaps = 44/711 (6%)

Query: 68  STKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL 127
           S   GSE+ E  +G+ ++    KK  + R T  Q   ++ F KEC HPD+ QR +L+ ++
Sbjct: 4   SIGGGSESGEEVNGNFRDD--GKKPSHKRLTSAQTSILKNFMKECHHPDEAQRCQLAVKI 61

Query: 128 GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGG-P 186
           GLEP Q+K WFQNKR  +K QHER  N  LR EN+K+R +N++ +E L    C +CGG P
Sbjct: 62  GLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENLKIKEELKAKICLDCGGSP 121

Query: 187 TAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRP-LELAVG 245
             + +       ++ ENA+L++E +++S++ A Y+ K +           SRP  E A+ 
Sbjct: 122 FPMKDHQNFVQEMKQENAQLKQECEKVSSLLASYMEKKI-----------SRPEFEQALK 170

Query: 246 NFGAQPG--------IGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMG 297
           +  + P          G   M+G   L ++ +   +A K  + ++  AAM+EL+R+ ++ 
Sbjct: 171 SIKSFPRDYECSSHMQGNLVMWGGV-LGQTSTQNYDAQKITMSQVVDAAMDELVRLVRVD 229

Query: 298 EPLWM---TSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEIL 354
           EP W+    + DG    L+ + Y + FP+    K      E+S+ + +V ++ I LV + 
Sbjct: 230 EPFWVKPSNTQDGYT--LHRENYEQVFPKNNHFKGAYVCEESSKYSGLVKISGIELVGMF 287

Query: 355 MDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYC 414
           +D+ +W+ +F  IV++A T++V   G  G+ +GAL +M  E  + SPLV  RE   +RYC
Sbjct: 288 LDLVKWTNLFPTIVTKAETIKVFEIGSRGSRDGALLLMNEEMHILSPLVRPREFNIIRYC 347

Query: 415 KQHGEGTWAVVDVSLDNLRP--SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-G 471
           K+   G W + DVS D+ RP  +P  R  + PSGC+I+EMP+G   VTWVEHVEV+D+  
Sbjct: 348 KKVDPGVWVITDVSFDSSRPNTAPLSRGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKIH 407

Query: 472 VHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGE-VGVITNQDGRKSMLKL 530
            H +Y+ LV   N +GA+ W+  L R CER        IP  E +GVI   +GR S++KL
Sbjct: 408 THYVYRDLVGEYNLYGAESWIKELQRMCERSLGSNVEAIPVEETIGVIQTLEGRNSVIKL 467

Query: 531 AERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPG-RPPGIVLSAATSFWLP 589
           A+RMV  FC  ++         L+      VRV  R + DD   +P G V++AAT+ WLP
Sbjct: 468 ADRMVKMFCECLTMPGQVELNHLTLDSIGGVRVSIRATTDDDASQPNGTVVTAATTLWLP 527

Query: 590 VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQS 649
           +P ++VF+FL+D   RS+W+ LS G  + E+AHI+NG   GNC+S+++     S   +Q 
Sbjct: 528 LPAQKVFEFLKDPTKRSQWNGLSCGNPMHEIAHISNGPYHGNCISVIK-----SFIPTQR 582

Query: 650 NMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANI 709
            M+ILQES T    S+VIYAP+D   M+V L G D   + +LP G  +     +   A  
Sbjct: 583 QMVILQESFTSSVGSYVIYAPIDRKTMDVALRGEDSKELPILPYGLIVCSKNQANLNAPF 642

Query: 710 GEAAS--GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           G + S   GSL+T+A Q          L++ S+  +N+ +A T+  +K +L
Sbjct: 643 GASKSIEDGSLITLAAQTYAIG---QVLNVDSLNDINSQLASTILNVKDAL 690


>gi|197116151|dbj|BAG68827.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
          Length = 686

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 250/683 (36%), Positives = 378/683 (55%), Gaps = 36/683 (5%)

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           +Q   + +R HR T +Q QE+E F+ E PHP ++QR EL + L +   QVK WFQNKR  
Sbjct: 35  DQDGGRMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNL 94

Query: 145 MKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            K  ++  EN  LR E+++L A   + R A+  + C  CG  T  G+  ++   L  ENA
Sbjct: 95  EKINNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEYEVQKLMAENA 154

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL 264
            L  EID+ +   ++Y+ +P       S   PS           + PGI    +   +  
Sbjct: 155 NLEREIDQFN---SRYLSRPKQRMVSTSEQAPSS---------SSNPGINATPVLDFSGG 202

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTS-LDGTAAVLNEDEYVRTFPR 323
            R+    +E +  + + LA+ A+ ELI + ++  P WM   +  +  V    E  R+   
Sbjct: 203 TRT----SEKETSIFLNLAITALRELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFN 258

Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
            +  KP G   EASR   +V M  ++LV+ LMD  +W  VF+ IV  A T +V+ TG  G
Sbjct: 259 NV-TKPPGQIVEASRAKGLVPMTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVIPTGSGG 317

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS-LDNLRPSPAVRCRR 442
             +G+LQ + AEFQV SPLVP R+  ++RYCK+  +G W VVDV+   N    P    +R
Sbjct: 318 TKSGSLQQIQAEFQVISPLVPKRKVTFIRYCKEIRQGLWVVVDVTPTQNPTLLPYGCSKR 377

Query: 443 RPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERL 502
            PSG +I ++ NGYS+VTW+E  E ++  +H LY+ L+  G   GAKRW+ATL R CE L
Sbjct: 378 LPSGLIIDDLSNGYSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESL 437

Query: 503 ASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTG-ADDV 561
           +++ +TN+   E+    +  G   ++KLA+RM +++  G+++ +   W  +     A ++
Sbjct: 438 STLSSTNLT--EISPGLSAKGATEIVKLAQRMTLNYYRGITSPSVDKWQKIQVENVAQNM 495

Query: 562 RVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMA 621
             M RK+V++PG   GIVLSA+TS WLPV    +F F+   + R EWDIL+N   ++E  
Sbjct: 496 SFMIRKNVNEPGELTGIVLSASTSVWLPVNQHTLFAFISHLSFRHEWDILTNDTTMEETI 555

Query: 622 HIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLN 681
            I   +   N +SLL++          + ML+LQE   D + + V+YAPV+  ++ +V  
Sbjct: 556 RIQKAKRHVNIISLLKI--------VNNGMLVLQEIWNDASGAMVVYAPVETNSIELVKR 607

Query: 682 GGDPDYVALLPSGFAILPDGT--SLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGS 739
           G + D V  LPSGF+I+PDG   S H  N G    GG LLT   QILV   PTA L  G+
Sbjct: 608 GENSDSVKFLPSGFSIVPDGVNGSYHRGNTG----GGCLLTFGLQILVGINPTAALIQGT 663

Query: 740 VATVNNLIACTVERIKASLSCES 762
           V +V  L+A T+ +IK++L  ++
Sbjct: 664 VKSVETLMAHTIVKIKSALDLQT 686


>gi|317468124|gb|ADV30315.1| GLABRA2 [Mimulus guttatus]
          Length = 528

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 220/538 (40%), Positives = 319/538 (59%), Gaps = 34/538 (6%)

Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNM 169
           KE PHPD+ QR +LS++LGL P QVKFWFQN+RTQ+K   ERHEN+ L+TE +KLR +N 
Sbjct: 1   KESPHPDENQRLQLSKQLGLHPGQVKFWFQNRRTQIKAIQERHENSVLKTEMDKLRDENK 60

Query: 170 RYREALSNASCPNCGGPTAIGEMSF----DEHHLRLENARLREEIDRISAIAAKYVGKPV 225
             RE L + SCPNCG  T  G+ S     DE  LR+ENA L+ E++++ +I  K      
Sbjct: 61  VLRETLKSPSCPNCGFATTSGKESITAATDEQRLRIENATLKTEVEKLRSIIGKSSQGTS 120

Query: 226 VNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVA 285
            N    SPP      E    +F    G  G E     D ++S                  
Sbjct: 121 PNTSSCSPPGNINDQE-NRSSFDFNTGNIGLERLRVKDTVKS------------------ 161

Query: 286 AMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF-----PRGIGPKPTGFKCEASRET 340
           A+ ELI+MA   EPLW+ S +    +LN DEY + F        + P  +    EAS+++
Sbjct: 162 ALNELIKMATHREPLWVPSYETGREILNYDEYTKQFGNENYYNKMQPNKS---IEASKDS 218

Query: 341 AVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPS 400
           A++ ++ + LV    D N+W  +F  ++S A T++V+  G   N +GA+ +M AE Q+ +
Sbjct: 219 AIIFVDLLWLVRSFXDANRWQELFPCLISSASTVDVICNGEGENGDGAVHLMFAEIQMLT 278

Query: 401 PLVPTRESYYVRYCKQHGEGTWAVVDVSLD--NLRPSPAVRCRRRPSGCLIQEMPNGYSK 458
           P+V TRE Y+ R+CK+     WA+VDVS+D  N+  S + +CR+RPSGC+I++  NG+ K
Sbjct: 279 PMVATREMYFFRHCKKVSTYQWAIVDVSIDEDNIDAS-SQKCRKRPSGCIIEDKSNGHCK 337

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEH+E     +H+LY+ +V+ G AFGA+ W+ TL +QCERL   +ATN+P  +   +
Sbjct: 338 VTWVEHIECQKIPIHSLYRSIVNKGLAFGARHWICTLQQQCERLVFHVATNVPVKDSSGV 397

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
               GRKS+L L++RM  SFC  +  S    W  +     DD+RV  R ++++ G P G 
Sbjct: 398 DTLAGRKSILTLSQRMSWSFCRAIGGSRRILWKKIVSKTGDDIRVSLRNNLNEQGEPIGT 457

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLL 636
           +LSA +S WLP+    +FDFLRDEN R+EWDI+SNG  V    ++A G+D GN V+++
Sbjct: 458 ILSAVSSVWLPLSHHALFDFLRDENRRNEWDIMSNGSTVHSTVNLAKGQDRGNAVTVM 515


>gi|218189094|gb|EEC71521.1| hypothetical protein OsI_03822 [Oryza sativa Indica Group]
          Length = 759

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 272/712 (38%), Positives = 373/712 (52%), Gaps = 86/712 (12%)

Query: 89  NKKKR---YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           NKK+R   YHRHT  QI+ MEA FKE PHPD++QR++                       
Sbjct: 91  NKKRRRKNYHRHTAEQIRIMEALFKESPHPDERQRQQ----------------------- 127

Query: 146 KTQHERHENTQLRTENEKLRADNMRYREALSNAS-CPNCG-------GPTAIGEMSFDEH 197
               ERHEN+ L++E EKL+ ++   RE     S C NCG          A       E 
Sbjct: 128 -AVQERHENSLLKSELEKLQDEHRAMRELAKKPSRCLNCGVVATSSDAVAAATAADTREQ 186

Query: 198 HLRLENARLREEIDRISAIAAKYVGKPVVNYPL------LSPPVPSRPLELAVGNFGAQP 251
            LRLENA+L+ EI+R+     K     V + P       +     S PL    G F    
Sbjct: 187 RLRLENAKLKAEIERLRGTPGKSAADGVASPPCSASAGAMQTNSRSPPLHDHDGGF---- 242

Query: 252 GIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAV 311
                        LR      + DKP I+ELA  A++EL+ M   GEP+W+  ++    +
Sbjct: 243 -------------LRH-----DDDKPRILELATRALDELVGMCSSGEPVWVRGVETGRDI 284

Query: 312 LNEDEYVRTFPR---GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIV 368
           LN DEYVR F R   G G +  G+  EASRE  +V ++ + LV   MDV++W  +F  ++
Sbjct: 285 LNYDEYVRLFRRDHGGSGDQMAGWTVEASRECGLVYLDTMQLVHTFMDVDKWKDLFPTMI 344

Query: 369 SRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS 428
           S+A TLE++S       +G LQ+M AE Q  +P+VPTRE Y+ RYCK+     WA+VDVS
Sbjct: 345 SKAATLEMISNREDDGRDGVLQLMYAELQTLTPMVPTRELYFARYCKKLAAERWAIVDVS 404

Query: 429 LDN----LRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGN 484
            D     +  S AVRC + PSGCLI+E  NG  K+TWVEH       V  LY+ + ++G 
Sbjct: 405 FDESETGVHASSAVRCWKNPSGCLIEEQNNGRCKMTWVEHTRCRRCTVAPLYRAVTASGV 464

Query: 485 AFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSA 544
           AFGA+RWVA L  QCER+   +ATN+PT +   ++   GR+S+LKLA RM  S C     
Sbjct: 465 AFGARRWVAALQLQCERMVFAVATNVPTRDSTGVSTLAGRRSVLKLAHRMTSSLCRTTGG 524

Query: 545 STAHTW-----TTLSGTGADDVRVMTRKSV-DDPGRPPGIVLSAATSFWLPVPPKRVFDF 598
           S    W         G G DD+ + +R++  DDPG P G++  AA S WLPV P  + D 
Sbjct: 525 SRDMAWRRAPKGGSGGGGDDDIWLTSRENAGDDPGEPQGLIACAAASTWLPVNPTALLDL 584

Query: 599 LRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESC 658
           LRDE+ R EWD++  G  VQ   ++A G+D  NCV+             +    +LQ+ C
Sbjct: 585 LRDESRRPEWDVMLPGKSVQSRVNLAKGKDRTNCVTAYAAR--PEEEEERGGKWVLQDVC 642

Query: 659 TDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGF-AILPDGTSLHGANI------GE 711
           T+P  S + YA +D  A+  V+ G D   V LLP GF +++PDG     A I      GE
Sbjct: 643 TNPCESTIAYAAIDAAALQPVIAGHDSSGVHLLPCGFISVMPDGLESKPAVITASRRGGE 702

Query: 712 AASGGSLLTVAFQILVDSVPTAK-LSLGSVATVNNLIACTVERIKASLSCES 762
           A+  GSL+TVAFQ+       A  LS  SV  V  L++ T+  I+ +L C+S
Sbjct: 703 ASGAGSLVTVAFQVPASPSAAAATLSPDSVEAVTVLVSSTLRNIRKALGCDS 754


>gi|125572100|gb|EAZ13615.1| hypothetical protein OsJ_03531 [Oryza sativa Japonica Group]
          Length = 759

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 270/712 (37%), Positives = 372/712 (52%), Gaps = 86/712 (12%)

Query: 89  NKKKR---YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           NKK+R   YHRHT  QI+ MEA FKE PHPD++QR++                       
Sbjct: 91  NKKRRRKNYHRHTAEQIRIMEALFKESPHPDERQRQQ----------------------- 127

Query: 146 KTQHERHENTQLRTENEKLRADNMRYREALSNAS-CPNCG-------GPTAIGEMSFDEH 197
               ERHEN+ L++E EKL+ ++   RE     S C NCG          A       E 
Sbjct: 128 -AVQERHENSLLKSELEKLQDEHRAMRELAKKPSRCLNCGVVATSSDAAAAATAADTREQ 186

Query: 198 HLRLENARLREEIDRISAIAAKYVGKPVVNYPL------LSPPVPSRPLELAVGNFGAQP 251
            LRLE A+L+ EI+R+     K     + + P       +     S PL    G F    
Sbjct: 187 RLRLEKAKLKAEIERLRGTPGKSAADGIASPPCSASAGAMQTNSRSPPLHDHDGGF---- 242

Query: 252 GIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAV 311
                        LR      + DKP I+ELA  A++EL+ M   GEP+W+  ++    +
Sbjct: 243 -------------LRH-----DDDKPRILELATRALDELVGMCSSGEPVWVRGVETGRDI 284

Query: 312 LNEDEYVRTFPR---GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIV 368
           LN DEYVR F R   G G +  G+  EASRE  +V ++ + LV   MDV++W  +F  ++
Sbjct: 285 LNYDEYVRLFRRDHGGSGDQMAGWTVEASRECGLVYLDTMHLVHTFMDVDKWKDLFPTMI 344

Query: 369 SRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS 428
           S+A TLE++S       +G LQ+M AE Q  +P+VPTRE Y+ RYCK+     WA+VDVS
Sbjct: 345 SKAATLEMISNREDDGRDGVLQLMYAELQTLTPMVPTRELYFARYCKKLAAERWAIVDVS 404

Query: 429 LDN----LRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGN 484
            D     +  S AVRC + PSGCLI+E  NG  K+TWVEH       V  LY+ + ++G 
Sbjct: 405 FDESETGVHASSAVRCWKNPSGCLIEEQNNGRCKMTWVEHTRCRRCTVAPLYRAVTASGV 464

Query: 485 AFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSA 544
           AFGA+RWVA L  QCER+   +ATN+PT +   ++   GR+S+LKLA RM  S C     
Sbjct: 465 AFGARRWVAALQLQCERMVFAVATNVPTRDSTGVSTLAGRRSVLKLAHRMTSSLCRTTGG 524

Query: 545 STAHTW-----TTLSGTGADDVRVMTRKSV-DDPGRPPGIVLSAATSFWLPVPPKRVFDF 598
           S    W         G G DD+ + +R++  DDPG P G++  AA S WLPV P  + D 
Sbjct: 525 SCDMAWRRAPKGGSGGGGDDDIWLTSRENAGDDPGEPQGLIACAAASTWLPVNPTALLDL 584

Query: 599 LRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESC 658
           LRDE+ R EWD++  G  VQ   ++A G+D  NCV+             +    +LQ+ C
Sbjct: 585 LRDESRRPEWDVMLPGKSVQSRVNLAKGKDRTNCVTAYAAR--PEEEEERGGKWVLQDVC 642

Query: 659 TDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGF-AILPDGTSLHGANI------GE 711
           T+P  S + YA +D  A+  V+ G D   V LLP GF +++PDG     A I      GE
Sbjct: 643 TNPCESTIAYAAIDAAALQPVIAGHDSSGVHLLPCGFISVMPDGLESKPAVITASRRGGE 702

Query: 712 AASGGSLLTVAFQILVDSVPTAK-LSLGSVATVNNLIACTVERIKASLSCES 762
           A+  GSL+TVAFQ+       A  LS  SV  V  L++ T+  I+ +L C+S
Sbjct: 703 ASGAGSLVTVAFQVPASPSAAAATLSPDSVEAVTVLVSSTLRNIRKALGCDS 754


>gi|224124266|ref|XP_002319288.1| predicted protein [Populus trichocarpa]
 gi|222857664|gb|EEE95211.1| predicted protein [Populus trichocarpa]
          Length = 438

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/442 (49%), Positives = 291/442 (65%), Gaps = 10/442 (2%)

Query: 261 AADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRT 320
           A+DLL ++S  ++A+K  I E+AV+AM+EL+R    GEPLW    D    +LNE EY+R 
Sbjct: 1   ASDLLMAVSVGSDANKKKINEMAVSAMDELVRKCLAGEPLWQHRQDCGLEILNEGEYIRE 60

Query: 321 F-PRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           F P     +    + EASR    V M+  SLVE LMDV QWS+VFS IVSR   L VLS 
Sbjct: 61  FRPFDANAEKNFLQTEASRHIGFVRMDATSLVECLMDVKQWSSVFSNIVSRTTVLGVLSR 120

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVR 439
           GVAGNYN  LQVM AEF +P+PLV  RES + RYCKQ G GTW VVDVSLD+L P P V 
Sbjct: 121 GVAGNYNETLQVMKAEFHMPTPLVNIRESQFARYCKQIGPGTWGVVDVSLDSLFPYPLVI 180

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
            RRRPSGCLI EMP+GYSKV WVEHVEVD++ VH ++  +V  G AF A RWVA++ R C
Sbjct: 181 FRRRPSGCLIVEMPDGYSKVIWVEHVEVDNKFVHRMFWPIVLPGFAFSAMRWVASIVRHC 240

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD 559
           E + ++++T++ +  +     ++G+ S+L+LA RM+ SF    SAST + W  +     +
Sbjct: 241 EPVGNIISTSLDSATIP----RNGKTSVLRLARRMMRSFYHDNSASTDNFWVRIHLCDGE 296

Query: 560 DVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQE 619
           D R+MT K++      P   L   TS W+P PPKRVFDFLR  ++R++ D+L+ G  VQE
Sbjct: 297 DFRLMT-KTIYALNGSPSSTLVFTTSLWVPAPPKRVFDFLRHGDSRNKLDLLARGYAVQE 355

Query: 620 MAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVV 679
           + HI  G    N VS+++VN    +  +Q  +L LQES + PT S+V+YAP+DI+ M ++
Sbjct: 356 IMHIIKGESPENRVSIMQVN----SAPNQIEILYLQESYSHPTGSYVVYAPIDILTMGMM 411

Query: 680 LNGGDPDYVALLPSGFAILPDG 701
           L GG+ D V +LPSGF I PDG
Sbjct: 412 LGGGNSDLVNILPSGFVIHPDG 433


>gi|197116175|dbj|BAG68845.1| homeodomain-containing transcription factor FWA [Turritis glabra]
          Length = 683

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 258/684 (37%), Positives = 374/684 (54%), Gaps = 37/684 (5%)

Query: 83  DQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKR 142
           D  Q   + +R HRHT +QIQE+E F++   HP + QR EL + L +E  QVKFWFQNKR
Sbjct: 33  DNGQDGERMRRSHRHTAYQIQELENFYEHNSHPTEDQRYELGQRLNMEAKQVKFWFQNKR 92

Query: 143 TQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLE 202
           TQ+K   ER +N  L   ++++     + R A+  +SC  CG  T  G++ ++   L +E
Sbjct: 93  TQVKINRERLQNRALIENHDRMLGAQDKLRCAMLRSSCNICGRATNCGDVDYEVQKLMVE 152

Query: 203 NARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFG--AQPGIGGGEMYG 260
           N RL+ EID  S+             P      PS PL     N G  A P +  G    
Sbjct: 153 NNRLKREIDPYSSFLYD---------PSRVQVSPSEPLPSCSSNPGRNATPQLDLG---- 199

Query: 261 AADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRT 320
                 S SA  E  K   ++LA  AM+ELI + +   P W   L      L  ++Y   
Sbjct: 200 ----CGSTSAKKEISK--FLDLANTAMKELIVLGEPDCPFWTIDLRSKEVSLVYEKYRGV 253

Query: 321 FPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTG 380
           F   I  KP G   EASR+T +V M   +LV+ LMD  +W  VF+ IV  + T +V+ TG
Sbjct: 254 FNNII--KPPGCVVEASRDTGLVPMTSSTLVKTLMDTGKWVNVFASIVPVSSTHKVIRTG 311

Query: 381 VAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRC 440
             G  +G+LQ + AEFQV SPLVP R+  ++RYCK+   G W VVDV+        +   
Sbjct: 312 YGGVKSGSLQQIQAEFQVISPLVPKRQVTFLRYCKELKHGLWVVVDVTPAEYPTFLSYGA 371

Query: 441 RRR-PSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
             R PSG +I+++ NGYSKVTW+E  E ++  +H LY+ L+ +G   GAKRW  TL R C
Sbjct: 372 SNRLPSGLIIEDIANGYSKVTWIEQAEYNESHIHQLYQPLIGSGIGLGAKRWFKTLQRYC 431

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTG-A 558
             L+++ +TN+     G+  +  G   ++KLA+RM + +  G++ S+   W  +     A
Sbjct: 432 GSLSTLTSTNLDQISPGL--SAKGATELVKLAQRMTLKYYTGITGSSTDKWEIIQVENVA 489

Query: 559 DDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQ 618
            ++  MTRK++++ G   GIVLSAATS W PV  + +F FL   + R EWDIL++   ++
Sbjct: 490 QNMIFMTRKNLNETGEYTGIVLSAATSVWFPVNQQTLFAFLSHPSFRHEWDILTHNTSME 549

Query: 619 EMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNV 678
           E       +  GN +SLLR+         ++ ML+LQE   D + + V+YAPV+  ++  
Sbjct: 550 ETIRFQKAKGHGNIISLLRI--------IRNGMLVLQEVWNDASGAVVVYAPVETSSIEP 601

Query: 679 VLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLG 738
           V  G + D V LLPSGF+ILPDG + H         GG LLT+  QIL+ S PTA+L+  
Sbjct: 602 VKRGENSDSVQLLPSGFSILPDGVTDHKGK--SKTGGGCLLTLGLQILLSSNPTAELTQD 659

Query: 739 SVATVNNLIACTVERIKASLSCES 762
           SV  V  LI  T+ +IK++L  ++
Sbjct: 660 SVQKVEELIGHTIGKIKSALHIQT 683


>gi|255563731|ref|XP_002522867.1| Homeobox protein FWA, putative [Ricinus communis]
 gi|223537951|gb|EEF39565.1| Homeobox protein FWA, putative [Ricinus communis]
          Length = 581

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/533 (44%), Positives = 315/533 (59%), Gaps = 43/533 (8%)

Query: 261 AADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRT 320
           A+DLL ++S   E +K  I ELA +AMEEL+R A  G+PLW   +D     LNE EY+R 
Sbjct: 52  ASDLLMAVSLGAEENKIKINELANSAMEELLRKAFEGKPLWRRQIDSGIEFLNEAEYIRE 111

Query: 321 F------------------PRGI----------------GPKPTGFKCEASRETAVVIMN 346
           F                  P+ +                G +    + EASRE   +  N
Sbjct: 112 FRAFDATLREIMRMIEVEDPQCLSNLDIITTGSRHKHLRGFEQYVLQTEASREMGFIHAN 171

Query: 347 HISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTG-VAGNYNGALQVMTAEFQVPSPLVPT 405
             S+VE LMD+ QWS+ FS +VSRA  L  LS G + GNY+  LQV+ AEF VP+PLVP 
Sbjct: 172 ATSIVECLMDLKQWSSAFSKVVSRATLLGFLSVGSMVGNYDETLQVIRAEFHVPTPLVPI 231

Query: 406 RESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHV 465
           RE  + RYCK+    TW VVDVSL+NL P P VR +RRPSGCLIQE+PNGYSKVTWVEHV
Sbjct: 232 RECQFARYCKRLNSNTWGVVDVSLENLFPYPIVRFQRRPSGCLIQELPNGYSKVTWVEHV 291

Query: 466 EVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK 525
           EVD+     +++ LV +G AFGAKRW+A+L +  ER+A++M+   P    G    Q+G++
Sbjct: 292 EVDNIVGSTIFQPLVLSGFAFGAKRWIASLIQHFERIATLMSVE-PIFMDGGSICQNGKR 350

Query: 526 SMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATS 585
           +++ LAERM+  F   +S ST + W     TGA+D R+MT KS+ D        ++   S
Sbjct: 351 NLIMLAERMMTKFVLDLSGSTNNLWMPFPVTGAEDFRMMT-KSIGDNSGWSITTIAFTYS 409

Query: 586 FWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSAN 645
            WLP PP RVFDFLR E+ R++WD+LS+   VQE+ HI  G +  N +S+LR     S  
Sbjct: 410 LWLPAPPSRVFDFLRHEDCRNKWDLLSHELEVQELTHIIKGENQENRISVLRT---MSGY 466

Query: 646 SSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH 705
           S    +L LQES TDP AS+V+YAP D  +M  +L GG+ D + +LPSGF I PD     
Sbjct: 467 SDCKEILYLQESYTDPFASYVVYAPFDFDSMATILKGGNSDDMNILPSGFVIHPDK---Q 523

Query: 706 GANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
            +N G     G +LT+AF I+  S     +S  SV T+ N++  T   IKA++
Sbjct: 524 ASNYGGHEGDGCVLTLAFHIIDGSSIKDIISPQSVDTIYNILVRTACLIKAAV 576


>gi|2245130|emb|CAB10551.1| GLABRA2 like protein [Arabidopsis thaliana]
 gi|7268524|emb|CAB78774.1| GLABRA2 like protein [Arabidopsis thaliana]
          Length = 661

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 254/696 (36%), Positives = 371/696 (53%), Gaps = 125/696 (17%)

Query: 76  HEGASGDDQEQRP--NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
           H+       EQ P   KKKRYHRHT  QIQ+MEA FKE  HPD K R  LS++LGL P+Q
Sbjct: 72  HDPVENTAIEQEPPAAKKKRYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKLGLSPIQ 131

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMS 193
           VKFWFQNKRTQ+K Q  R +N +L+ ENE L+ ++   +       C  CG         
Sbjct: 132 VKFWFQNKRTQIKAQQSRSDNAKLKAENETLKTESQNIQSNFQCLFCSTCG--------- 182

Query: 194 FDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGI 253
              H+LRLENARLR+E+DR+ +I +            +  P PS+ +             
Sbjct: 183 ---HNLRLENARLRQELDRLRSIVS------------MRNPSPSQEITPETNKNN----- 222

Query: 254 GGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLW-MTSLDGTAAVL 312
               M  A           E +K + +ELAV+   EL +M  + EPLW    LD  +  L
Sbjct: 223 -NDNMLIA-----------EEEKAIDMELAVSCARELAKMCDINEPLWNKKRLDNESVCL 270

Query: 313 NEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAM 372
           NE+EY + F   +      F+ EASR  AV+++N I+LV+  +D ++WS +F  IVS A 
Sbjct: 271 NEEEYKKMFLWPLMNDDDRFRREASRANAVIMLNCITLVKAFLDADKWSEMFFPIVSSAK 330

Query: 373 TLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL 432
           T +++S+G +G  +G L +  AE                       EG W VVD  +D +
Sbjct: 331 TAQIISSGASGP-SGTLLLQNAE-----------------------EGKWMVVDFPIDRI 366

Query: 433 RPSPAV---RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHN-LYKQLVSTGNAFGA 488
           +P+ A    + RR+PSGC+IQ M NGYS+VTWVEHVEV+++ V + + ++ V +G AFGA
Sbjct: 367 KPASATTTDQYRRKPSGCIIQAMRNGYSQVTWVEHVEVEEKHVQDEVVREFVESGVAFGA 426

Query: 489 KRWVATLDRQCERLASVMATNIPT-GEVGV-----ITNQDGRKSMLKLAERMVISFCAGV 542
           +RW++ L RQCER+AS+MATNI   G + +     I + + RK+++KL++RMV +FC  +
Sbjct: 427 ERWLSVLKRQCERMASLMATNITDLGGIYITCFTMIPSVEARKNLMKLSQRMVKTFCLNI 486

Query: 543 SASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDE 602
             S     T       D V++++RK         G+V  A +   LP   ++VFD LRD 
Sbjct: 487 INSHGQAPT------KDTVKIVSRKVCG------GLVPCAVSVTLLPYSHQQVFDLLRDN 534

Query: 603 NTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPT 662
                          Q ++ +                    +NSS +  L+LQE+CTD +
Sbjct: 535 ---------------QRLSQV-------------------ESNSSHNVELMLQETCTDNS 560

Query: 663 ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVA 722
            S ++Y+ VD VA+ + +NG DP  + LLP GF+++P   S  G      +S   LLTVA
Sbjct: 561 GSLLVYSTVDPVAVQLAMNGEDPSEIPLLPVGFSVVPVNPS-DGVEGSSVSSPSCLLTVA 619

Query: 723 FQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
            Q+L  +V T +L L +V+ +N+ I  TV RI ++L
Sbjct: 620 IQVLGSNVTTERLDLSTVSVINHRICATVNRITSAL 655


>gi|194706036|gb|ACF87102.1| unknown [Zea mays]
          Length = 271

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/266 (78%), Positives = 229/266 (86%), Gaps = 16/266 (6%)

Query: 506 MATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMT 565
           MA+NIP G++GVIT+ +GRKSMLKLAERMV SFC GV+AS AH WTTLSG+GA+DVRVMT
Sbjct: 1   MASNIPNGDLGVITSIEGRKSMLKLAERMVASFCGGVTASAAHQWTTLSGSGAEDVRVMT 60

Query: 566 RKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIAN 625
           RKSVDDPGRPPGIVL+AATSFWLPVPPKRVFDFLRDE +RSEWDILSNGG VQEMAHIAN
Sbjct: 61  RKSVDDPGRPPGIVLNAATSFWLPVPPKRVFDFLRDETSRSEWDILSNGGAVQEMAHIAN 120

Query: 626 GRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDP 685
           GRD GNCVSLLRVN   SANS+QSNMLILQESCTD + S+V+YAPVD+VAMNVVLNGGDP
Sbjct: 121 GRDHGNCVSLLRVN---SANSNQSNMLILQESCTDASGSYVVYAPVDVVAMNVVLNGGDP 177

Query: 686 DYVALLPSGFAILPDGTSLHG-------------ANIGEAASGGSLLTVAFQILVDSVPT 732
           DYVALLPSGFAILPDG    G                   A+GGSLLTVAFQILVDSVPT
Sbjct: 178 DYVALLPSGFAILPDGPPAPGMAPHHGGEGAAGGGLEELEAAGGSLLTVAFQILVDSVPT 237

Query: 733 AKLSLGSVATVNNLIACTVERIKASL 758
           AKLSLGSVATVN+LIACTVERIKA++
Sbjct: 238 AKLSLGSVATVNSLIACTVERIKAAV 263


>gi|15237948|ref|NP_197234.1| homeobox-leucine zipper protein HDG9 [Arabidopsis thaliana]
 gi|75309030|sp|Q9FFI0.1|HDG9_ARATH RecName: Full=Homeobox-leucine zipper protein HDG9; AltName:
           Full=HD-ZIP protein HDG9; AltName: Full=Homeodomain
           GLABRA 2-like protein 9; AltName: Full=Homeodomain
           transcription factor HDG9; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 9
 gi|10177077|dbj|BAB10519.1| homeobox protein [Arabidopsis thaliana]
 gi|332005030|gb|AED92413.1| homeobox-leucine zipper protein HDG9 [Arabidopsis thaliana]
          Length = 718

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 259/737 (35%), Positives = 386/737 (52%), Gaps = 67/737 (9%)

Query: 67  DSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE 126
           D++    EN   A+ +++ +    KK YHRHT  QI  +E +FKECPHPD+ QR+ L  E
Sbjct: 7   DNSSDERENDVDANTNNRHE----KKGYHRHTNEQIHRLETYFKECPHPDEFQRRLLGEE 62

Query: 127 LGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGP 186
           L L+P Q+KFWFQNKRTQ K+ +E+ +N  LR EN K+R +N    +AL+N  CP CGG 
Sbjct: 63  LNLKPKQIKFWFQNKRTQAKSHNEKADNAALRAENIKIRRENESMEDALNNVVCPPCGGR 122

Query: 187 TAIGEMSFDE-HHLRLENARLREEIDRISAIAAKYVGKPVVNY---PLLSPPVPSRPLEL 242
               E        LR +NA L++E +R+S    +Y G  + N    P L  P        
Sbjct: 123 GPGREDQLRHLQKLRAQNAYLKDEYERVSNYLKQYGGHSMHNVEATPYLHGPSNHAS--- 179

Query: 243 AVGNFGAQPGIGGGEMYGAADLLR--------SISAPTEADKPM---------------I 279
              N  A  G     +   + + R        + +AP +  KP+               +
Sbjct: 180 TSKNRPALYGTSSNRLPEPSSIFRGPYTRGNMNTTAPPQPRKPLEMQNFQPLSQLEKIAM 239

Query: 280 IELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRE 339
           +E A  A+ E++ + QM + +W  S      V++   Y + F +      T  + E+S++
Sbjct: 240 LEAAEKAVSEVLSLIQMDDTMWKKSSIDDRLVIDPGLYEKYFTK----TNTNGRPESSKD 295

Query: 340 TAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVP 399
             VV M+  +L++I +   +W+ +F  IV+ A T+ VL + V        +V+  +  + 
Sbjct: 296 VVVVQMDAGNLIDIFLTAEKWARLFPTIVNEAKTIHVLDS-VDHRGKTFSRVIYEQLHIL 354

Query: 400 SPLVPTRESYYVRYCKQHGEGTWAVVDVS--LDNLRPSPAVR-CRRRPSGCLIQEMPNGY 456
           SPLVP RE   +R C+Q  +  W + DVS  L N+    +   C +RPSG LIQ +P+G+
Sbjct: 355 SPLVPPREFMILRTCQQIEDNVWMIADVSCHLPNIEFDLSFPICTKRPSGVLIQALPHGF 414

Query: 457 SKVTWVEHVEVDDRGV--HNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIP--- 511
           SKVTW+EHV V+D  V  H LY+ L+  G  +GA+RW  TL+R CERL  + +T++P   
Sbjct: 415 SKVTWIEHVVVNDNRVRPHKLYRDLLYGGFGYGARRWTVTLERTCERL--IFSTSVPALP 472

Query: 512 -TGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 570
                GV+    GR S++ L ERM+ +F   +       ++  S T    +R+  R + +
Sbjct: 473 NNDNPGVVQTIRGRNSVMHLGERMLRNFAWMMKMVNKLDFSPQSETNNSGIRIGVRIN-N 531

Query: 571 DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTG 630
           + G+PPG+++ A +S  LP+PP +V+DFL++   R +WD+L +G    E A    G +  
Sbjct: 532 EAGQPPGLIVCAGSSLSLPLPPVQVYDFLKNLEVRHQWDVLCHGNPATEAARFVTGSNPR 591

Query: 631 NCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGG-DPDYVA 689
           N VS L      S     + ++ILQ+S  D     V YAP+D+      ++G  DP  + 
Sbjct: 592 NTVSFLE----PSIRDINTKLMILQDSFKDALGGMVAYAPMDLNTACAAISGDIDPTTIP 647

Query: 690 LLPSGFAILPDGTSLHGANIGEAASGGS--LLTVAFQILVDS---VPTAKLSLGSVATVN 744
           +LPSGF I  DG    G      A GGS  LLTVAFQILV      P   L + S  TVN
Sbjct: 648 ILPSGFMISRDGRPSEG-----EAEGGSYTLLTVAFQILVSGPSYSPDTNLEV-SATTVN 701

Query: 745 NLIACTVERIKASLSCE 761
            LI+ TV+RIKA L CE
Sbjct: 702 TLISSTVQRIKAMLKCE 718


>gi|219887699|gb|ACL54224.1| unknown [Zea mays]
          Length = 298

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/296 (72%), Positives = 235/296 (79%), Gaps = 41/296 (13%)

Query: 506 MATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMT 565
           MA+NIPT ++GVIT+ +GRKSMLKLAERMV SFC GV+AS AH WTTLSG+GADDVRVMT
Sbjct: 1   MASNIPTSDIGVITSTEGRKSMLKLAERMVTSFCGGVTASAAHQWTTLSGSGADDVRVMT 60

Query: 566 RKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSE------------------ 607
           RKSVDDPGRPPGIVL+AATSFWLP+ PKRVFDFLRDE++RSE                  
Sbjct: 61  RKSVDDPGRPPGIVLNAATSFWLPITPKRVFDFLRDESSRSEARTRAPTHTQFFFNREHV 120

Query: 608 -----------------WDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSN 650
                            WDILSNGGVVQEMAHIANGRD GNCVSLLRVN  QS NS+QSN
Sbjct: 121 LPSYEPPFLFFFFLFLQWDILSNGGVVQEMAHIANGRDHGNCVSLLRVN--QSTNSTQSN 178

Query: 651 MLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG----TSLHG 706
           MLILQESCTD + S+VIYAPVD+VAMNVVLNGGDPDYVALLPSGFAILPDG    +++ G
Sbjct: 179 MLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPSGSSNMQG 238

Query: 707 ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
              G   SGGSLLTVAFQILVDSVPTAKLSLGSVATVN+LIA TVERIKA++S ES
Sbjct: 239 GGGGGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIARTVERIKAAVSGES 294


>gi|7269403|emb|CAB81363.1| putative homeodomain-protein [Arabidopsis thaliana]
          Length = 689

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 241/702 (34%), Positives = 368/702 (52%), Gaps = 70/702 (9%)

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           +Q   + +R HR T +Q QE+E F+ E PHP ++QR EL + L +   QVK WFQNKR  
Sbjct: 34  DQDGGRMRRTHRRTAYQTQELEKFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNL 93

Query: 145 MKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            K  ++  EN  LR E+++L A   + R A+  + C  CG  T  G+  ++   L  ENA
Sbjct: 94  EKVNNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEYEVQKLMAENA 153

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL 264
            L  EID+ +   ++Y+  P       S   PS           + PGI    +   +  
Sbjct: 154 NLEREIDQFN---SRYLSHPKQRMVSTSEQAPSS---------SSNPGINATPVLDFSGG 201

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTS-LDGTAAVLNEDEYVRTFPR 323
            R+    +E +  + + LA+ A+ ELI + ++  P WM   +  +  V    E  R+   
Sbjct: 202 TRT----SEKETSIFLNLAITALRELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFN 257

Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
            +  KP G   EASR   +V M  ++LV+ LMD  +W  VF+ IV  A T +VLSTG  G
Sbjct: 258 NV-TKPPGQIVEASRAKGLVPMTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVLSTGSGG 316

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS-LDNLRPSPAVRCRR 442
             +G+LQ + AEFQV SPLVP R+  ++RYCK+  +G W VVDV+   N    P    +R
Sbjct: 317 TKSGSLQQVQAEFQVISPLVPKRKVTFIRYCKEIRQGLWVVVDVTPTQNPTLLPYGCSKR 376

Query: 443 RPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERL 502
            PSG +I ++ NGYS+VTW+E  E ++  +H LY+ L+  G   GAKRW+ATL R CE L
Sbjct: 377 LPSGLIIDDLSNGYSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESL 436

Query: 503 ASVMATNI------------PTGEVGVIT-------NQDGRKSMLKLAERMVISFCAGVS 543
           +++ +TN+              G+  ++        +  G   ++KLA+RM +++  G++
Sbjct: 437 STLSSTNLTEISPGHFRFSTKFGQALIVIYVFDIGLSAKGATEIVKLAQRMTLNYYRGIT 496

Query: 544 ASTAHTWTTLSGTG-ADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDE 602
           + +   W  +     A ++  M RK+V++PG                     +F F+   
Sbjct: 497 SPSVDKWQKIQVENVAQNMSFMIRKNVNEPGN-----------------QHTLFAFISHL 539

Query: 603 NTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPT 662
           + R EWDIL+N   ++E   I   +  GN +SLL++          + ML+LQE   D +
Sbjct: 540 SFRHEWDILTNDTTMEETIRIQKAKRHGNIISLLKI--------VDNGMLVLQEIWNDAS 591

Query: 663 ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGT--SLHGANIGEAASGGSLLT 720
            + V+YAPV+  ++ +V  G + D V  LPSGF+I+PDG   S H  N G    GG LLT
Sbjct: 592 GAMVVYAPVETNSIELVKRGENSDSVKFLPSGFSIVPDGVNGSYHRGNTG----GGCLLT 647

Query: 721 VAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
              QILV   PTA L  G+V +V  L+A T+ +IK++L  ++
Sbjct: 648 FGLQILVGINPTAALIQGTVKSVETLMAHTIVKIKSALDLQT 689


>gi|7446302|pir||T05794 homeotic protein homolog M7J2.100 - Arabidopsis thaliana
 gi|2980797|emb|CAA18173.1| putative homeodomain-protein [Arabidopsis thaliana]
          Length = 690

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 241/702 (34%), Positives = 368/702 (52%), Gaps = 70/702 (9%)

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           +Q   + +R HR T +Q QE+E F+ E PHP ++QR EL + L +   QVK WFQNKR  
Sbjct: 35  DQDGGRMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNL 94

Query: 145 MKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            K  ++  EN  LR E+++L A   + R A+  + C  CG  T  G+  ++   L  ENA
Sbjct: 95  EKINNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEYEVQKLMAENA 154

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL 264
            L  EID+ +   ++Y+  P       S   PS           + PGI    +   +  
Sbjct: 155 NLEREIDQFN---SRYLSHPKQRMVSTSEQAPSS---------SSNPGINATPVLDFSGG 202

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTS-LDGTAAVLNEDEYVRTFPR 323
            R+    +E +  + + LA+ A+ ELI + ++  P WM   +  +  V    E  R+   
Sbjct: 203 TRT----SEKETSIFLNLAITALRELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFN 258

Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
            +  KP G   EASR   +V M  ++LV+ LMD  +W  VF+ IV  A T +VLSTG  G
Sbjct: 259 NV-TKPPGQIVEASRAKGLVPMTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVLSTGSGG 317

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS-LDNLRPSPAVRCRR 442
             +G+LQ + AEFQV SPLVP R+  ++RYCK+  +G W VVDV+   N    P    +R
Sbjct: 318 TKSGSLQQIQAEFQVISPLVPKRKVTFIRYCKEIRQGLWVVVDVTPTQNPTLLPYGCSKR 377

Query: 443 RPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERL 502
            PSG +I ++ NGYS+VTW+E  E ++  +H LY+ L+  G   GAKRW+ATL R CE L
Sbjct: 378 LPSGLIIDDLSNGYSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESL 437

Query: 503 ASVMATNI------------PTGEVGVIT-------NQDGRKSMLKLAERMVISFCAGVS 543
           +++ +TN+              G+  ++        +  G   ++KLA+RM +++  G++
Sbjct: 438 STLSSTNLTEISPGHFRFSTKFGQALIVIYVFDIGLSAKGATEIVKLAQRMTLNYYRGIT 497

Query: 544 ASTAHTWTTLSGTG-ADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDE 602
           + +   W  +     A ++  M RK+V++                 PV    +F F+   
Sbjct: 498 SPSVDKWQKIQVENVAQNMSFMIRKNVNE-----------------PVNQHTLFAFISHL 540

Query: 603 NTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPT 662
           + R EWDIL+N   ++E   I   +  GN +SLL++          + ML+LQE   D +
Sbjct: 541 SFRHEWDILTNDTTMEETIRIQKAKRHGNIISLLKI--------VNNGMLVLQEIWNDAS 592

Query: 663 ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGT--SLHGANIGEAASGGSLLT 720
            + V+YAPV+  ++ +V  G + D V  LPSGF+I+PDG   S H  N G    GG LLT
Sbjct: 593 GAMVVYAPVETNSIELVKRGENSDSVKFLPSGFSIVPDGVNGSYHRGNTG----GGCLLT 648

Query: 721 VAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
              QILV   PTA L  G+V +V  L+A T+ +IK++L  ++
Sbjct: 649 FGLQILVGINPTAALIQGTVKSVETLMAHTIVKIKSALDLQT 690


>gi|449449707|ref|XP_004142606.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Cucumis
           sativus]
 gi|449485422|ref|XP_004157163.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Cucumis
           sativus]
          Length = 589

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 232/548 (42%), Positives = 321/548 (58%), Gaps = 50/548 (9%)

Query: 255 GGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLW------------- 301
             +++ A+DLL ++S  TE ++  I EL  AAM+EL  +A  G+PLW             
Sbjct: 49  SNQLHRASDLLMAVSVCTEGNRLRITELVNAAMDELTNLALDGDPLWKPQEDDQDQADSY 108

Query: 302 MTSLDGTAAV---------LNEDEYVRTFPRGIGPKPTGF-------------KCEASRE 339
            T +D    V         L + E   T         T F             + E SR+
Sbjct: 109 YTLMDIMKMVEVGETQCSDLLDLEIDNTKSSSDYENKTNFGHDEDKQQERHHLRTEFSRQ 168

Query: 340 TAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST--GVAGNYNGALQVMTAEFQ 397
            A V M  + +V   MD+ QWS VFS IV+RA  L+  S+   V GNYNG L VM AEFQ
Sbjct: 169 IAYVRMEPLRIVGFFMDLEQWSFVFSDIVARATILKSWSSMEPVGGNYNGTLLVMRAEFQ 228

Query: 398 VPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-VRCRRRPSGCLIQEMPNGY 456
           +PSP+V TRES + R+CKQ    TW +VDVSL++L P P  V  RR+PSGCLIQ  PN  
Sbjct: 229 IPSPIVETRESCFGRFCKQLAPYTWGIVDVSLEDLFPYPLPVGFRRKPSGCLIQASPNDL 288

Query: 457 SKVTWVEHVEVDDRG--VHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGE 514
           SKV WVEH+EVD +   V  +Y+  +++G AFGAKRWV++L R C   A++MA +  T  
Sbjct: 289 SKVIWVEHMEVDQQTIMVDQMYEAYINSGLAFGAKRWVSSLVRHCTWEATLMAKSCSTLN 348

Query: 515 VGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSV-DDPG 573
            GV+  Q GR S+LKLAERM  SF   VS S  + W  +   G  D+RV+   ++ DDPG
Sbjct: 349 -GVLLLQAGRSSVLKLAERMTKSFYRNVSISKENPWIKIPFPGPQDIRVVVTPNLNDDPG 407

Query: 574 RPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCV 633
           RPP   +  +TS  +P  PK +F +LR E +R++WDILS G V+ E++ I NG D+ N V
Sbjct: 408 RPPCTSVVFSTSVHVPTNPKHLFHYLRHEKSRNKWDILSYGHVITELSCIINGTDSRNRV 467

Query: 634 SLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPS 693
           S+++VN    +   +  +  LQES  D + S+V++APVDI AM VVL GG+PDYVA+LPS
Sbjct: 468 SIIQVN----SAPRRIEIFYLQESFFDESGSYVVFAPVDIYAMAVVLRGGNPDYVAILPS 523

Query: 694 GFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVER 753
           GFAILPD   ++G    E  + GS+LTVA  I+  SV T ++   S+ +++ ++  TV  
Sbjct: 524 GFAILPDSPRMNGE---EDVADGSILTVALNIIDHSV-TQRVPFQSMVSMHRIMTETVAS 579

Query: 754 IKASLSCE 761
           IK + + +
Sbjct: 580 IKGAFNIQ 587


>gi|338797899|gb|AEI99593.1| HD-Zip IV transcription factor GL9H1 [Triticum durum]
          Length = 674

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 238/703 (33%), Positives = 363/703 (51%), Gaps = 68/703 (9%)

Query: 63  EEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE 122
           + + D ++S S+  +GA G  Q      K+R  R    Q Q +E FF  C HPD+ QR  
Sbjct: 18  DNDLDISQSNSDGQDGAEGSQQ-----PKRRLQRLNPQQTQVLEGFFGICAHPDENQRMG 72

Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPN 182
           +S   GL   QVKFWFQNKRT MK    + E  +++ +NE LR +N R   A   A CP 
Sbjct: 73  MSESTGLTMQQVKFWFQNKRTHMKHVTGKEETYRMKAQNEMLREENKRLASAAKTAFCPA 132

Query: 183 CGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLEL 242
           C     +   S +   LR EN  L++++ ++ A A                P  SRP +L
Sbjct: 133 CVALPGLNP-SVEVQRLRQENESLKQQLSQLRAEAH---------------PSSSRPFQL 176

Query: 243 AVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWM 302
              +   +  IG                  E D   I ELA +AM E + +++ G PLWM
Sbjct: 177 ---DPSTENIIG-----------------RENDMDAIAELAQSAMHEFVVLSESGGPLWM 216

Query: 303 TSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWST 362
               G+  VLN+  Y +TF  G      GF  EA+R   +V+M+   +V+ +MD   +++
Sbjct: 217 PVPGGSLDVLNKMAYAQTFGAGSSANAIGFMTEATRADGMVMMDAKQIVDYIMDSECYTS 276

Query: 363 VFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTW 422
              G+V+ A T +V     +  YNGA+ +MT E   PSPLVP+R+  +VR C+    GT 
Sbjct: 277 FCPGLVTSANTTKVYKWPTSAGYNGAMHLMTVETVFPSPLVPSRKCTFVRCCRDMQNGTV 336

Query: 423 AVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVST 482
            +VDVSLDN       +C + PSG LI+ + +  S+VT VEHV+V+D GVH LY+  +S 
Sbjct: 337 IIVDVSLDN--GDGTFKCHKMPSGILIRSLNSDASQVTVVEHVQVNDTGVHELYRPSLS- 393

Query: 483 GNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGV 542
           G  FGA+RWV+++ RQ  R+  +   +          N +GRK+++K+A+ ++  + +G+
Sbjct: 394 GLMFGARRWVSSIVRQSARMRDLFIVSKSASN----GNTNGRKTLMKIADGLLADYASGI 449

Query: 543 SASTAHTWTTLSGTGA-DDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRD 601
           +A     WT L G G  DD+R+  RK+ DD       V+S   SF LPVP K  FD L++
Sbjct: 450 AAVPGSGWTILRGAGTEDDIRITYRKNNDDSNNA---VVSVCASFHLPVPLKVTFDLLKN 506

Query: 602 ENTRSEWDILSNGGVVQEMAHIANGRDTG--NCVSLLRVNCLQSANSSQSNMLILQESCT 659
              R +WD+L NG  V+E   +  G   G  + VS+L +        ++ N++ILQ S  
Sbjct: 507 NLLRPKWDVLVNGNSVREEVAVCKGVGAGIDDVVSILHL-------KNRDNIMILQNSGY 559

Query: 660 DPTASFVIYAPVDIVAMNVVL---NGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGG 716
           D + +F++Y PV+I  MN ++   N  + + V+L P+GF +LP    +    +G    G 
Sbjct: 560 DVSGAFMVYCPVNIQVMNEIMSPSNTAESNNVSLYPTGFHLLP----VEDTALGLGEGGA 615

Query: 717 SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           +L+T  FQI++       L   S +T   L+   +  IK +L+
Sbjct: 616 TLVTAGFQIMLKLARGTGLYPRSASTAAGLMTENIATIKKTLT 658


>gi|242048284|ref|XP_002461888.1| hypothetical protein SORBIDRAFT_02g009860 [Sorghum bicolor]
 gi|241925265|gb|EER98409.1| hypothetical protein SORBIDRAFT_02g009860 [Sorghum bicolor]
          Length = 730

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 258/728 (35%), Positives = 385/728 (52%), Gaps = 74/728 (10%)

Query: 77  EGASGDD--QEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 134
           EG + +D  QE      KR  RHT  QI+E+ + +++  HPD+  R+ L  ++GLE  QV
Sbjct: 23  EGYNNEDYTQETETAASKRQKRHTPEQIRELISAYQQNHHPDEPTRRALGEKIGLEAKQV 82

Query: 135 KFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSF 194
           ++WFQN+R+QM+ +   H +   + +N  L A+N   R+A+   SC  CGG T   E+  
Sbjct: 83  QYWFQNQRSQMQAKAMEHNSKAAQRQNAALLAENASLRQAMLKRSCFTCGGATVPAELLA 142

Query: 195 DEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIG 254
           + H L +ENARLR +  R    A + + + V+ +     P   RP  +       +P   
Sbjct: 143 ENHRLLMENARLRGDYMR----ATELLNQIVLQHSAAPGPAVQRPPAVVF----RRP--- 191

Query: 255 GGEMYGAADLLRSISAPTEADKPMIIEL-AVAAMEELIRMAQMGEPLWMTSLDGTAAVLN 313
                GA  L     A  +AD+   +   A AAM++ + +A  GEPLW+ + DG A    
Sbjct: 192 -----GAVVLPVDEGASKQADRDTRLRRHAEAAMDQFVMLATSGEPLWLPTPDGEALSYL 246

Query: 314 EDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMT 373
             +   T P   G    G   EA+RET +V      L+  L D  +W  +F  +V+   T
Sbjct: 247 GYQKKATLPMHHG----GLIMEATRETGIVRAFVADLIVKLTDAKRWCEMFPDVVASVTT 302

Query: 374 LEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN-L 432
              ++   AG++   +Q+M AE  V SP +  R   ++RY K+  EG WAV+DVS+D  L
Sbjct: 303 NGAIT---AGDFGSCIQLMNAELWVQSPRLHNRRINFLRYNKRVAEGQWAVMDVSVDGIL 359

Query: 433 RPSPAVR-------------CRRRPSGCLIQEMPNG--YSKVTWVEHVEVDDRGVHNLYK 477
            PS   R             CR  PSGCLI++M  G  Y K+TWV H E D+  V  L++
Sbjct: 360 GPSAGRRTTDATAVANNTTGCRLLPSGCLIEDMGKGNDYCKITWVVHAEYDETMVPTLFR 419

Query: 478 QLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGE----VGVITNQDGRKSMLKLAER 533
            L+ +G AFGA RW+A+L  Q E L  + ++ +P G+    V  I++  G++ +L+LA+R
Sbjct: 420 PLLRSGKAFGAHRWLASLQSQYEYLTILHSSQVPRGDKDNTVAAISSM-GKRGILELAKR 478

Query: 534 MVISFCAGVSA-------STAHTWTTLSGTGA---DD--VRVMTRKSVDDPGRPPGIVLS 581
           M+  F + VS        S  + W   +GT A   DD  VR++T K    PG    +VLS
Sbjct: 479 MMAVFYSAVSGPVTQTSTSNLYEWPASAGTDARRTDDAAVRMVTWKK---PGSVADLVLS 535

Query: 582 AATSFWLP-VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           A+T+ WLP  PP+ VF +L D   R EWD+ +NG  V E+  +A G   GN VS+L  N 
Sbjct: 536 ASTTVWLPNTPPQLVFQYLCDGQRRGEWDVFANGTAVAELCSVATGPLHGNAVSVLYSNV 595

Query: 641 LQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPD 700
                 S+  +L+LQ++CTD + S V+YAPV+   M  V+NGGD   V L+PSGFA+LPD
Sbjct: 596 TTDGTDSK-KVLMLQQACTDASRSMVVYAPVEEDFMRAVMNGGDHASVFLMPSGFAVLPD 654

Query: 701 GT-------SLHGANIG-EAASGGSLLTVAFQILVDSVPTAKLSLGSVA--TVNNLIACT 750
           G        S   A IG +  + GS+LT+A Q L+  + ++       A   V NL+   
Sbjct: 655 GHGRVRDAPSSSSAPIGRDNHTAGSILTMACQALLPGLSSSDKHAADRAFDDVGNLLCHV 714

Query: 751 VERIKASL 758
           +++IKA++
Sbjct: 715 LKKIKAAV 722


>gi|449527811|ref|XP_004170903.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           GLABRA 2-like, partial [Cucumis sativus]
          Length = 416

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 187/417 (44%), Positives = 271/417 (64%), Gaps = 16/417 (3%)

Query: 358 NQWSTVFSGIVSRAMTLEVLSTGVAGNYN-GALQVMTAEFQVPSPLVPTRESYYVRYCKQ 416
           NQW  +F  ++S+A T++V+  G A  +N GA+Q+M AE Q+ +PLVPTRE Y++R+CKQ
Sbjct: 1   NQWKEMFPFMISKAATVDVICNGEAAKWNNGAVQLMFAEVQMLTPLVPTREMYFIRHCKQ 60

Query: 417 HGEGTWAVVDVSLDNLRPS----PAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV 472
                WA+VDVS++N+  +      V+ R+RPSGC+I++ PNG+ KVT VEH+E     V
Sbjct: 61  LDAEQWAIVDVSIENVEDNNIDVSLVKYRKRPSGCIIKDEPNGHCKVTMVEHLECVKNKV 120

Query: 473 HNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAE 532
           HNLY+ +V+ G AFGA+ W+ATL  QCER A  MATNIP  +   ++   GRKS LKLA+
Sbjct: 121 HNLYRSIVNNGTAFGARHWMATLQLQCERSAFFMATNIPMKDSTGVSTLAGRKSTLKLAQ 180

Query: 533 RMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPP 592
           RM  SF   V+AS+  TWT + G   +D+RV +RK++ DPG P G++L A +S WLP+ P
Sbjct: 181 RMSCSFSQAVAASSYQTWTKVVGKSGEDIRVCSRKNLSDPGEPIGVILCAVSSLWLPLSP 240

Query: 593 KRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNML 652
             +FDF RDE+ RS+WD +  G   + +A++A G+D GN V++  +    S  ++ +NM 
Sbjct: 241 HLLFDFFRDESRRSQWDAMFGGDKAKTIANLAKGQDRGNSVTIQTIG---SKENNNNNMW 297

Query: 653 ILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGT--------SL 704
           ILQ+S T+ + S V+Y+ VD+ +M  V++G D   V +LPSGF ILPDG         + 
Sbjct: 298 ILQDSSTNSSESMVVYSGVDVTSMQSVMSGCDSGSVTILPSGFXILPDGADSRPPLLITR 357

Query: 705 HGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
              +      GG+LLT A QIL D+ P AK +L SV  V ++I CT++ I+ S+ CE
Sbjct: 358 RKDDKTSDTHGGALLTAAVQILTDTSPAAKPTLESVEYVKSIICCTLKNIRTSMCCE 414


>gi|15218724|ref|NP_174724.1| homeobox-leucine zipper protein HDG10 [Arabidopsis thaliana]
 gi|75199883|sp|Q9S9Z0.1|HDG10_ARATH RecName: Full=Homeobox-leucine zipper protein HDG10; AltName:
           Full=HD-ZIP protein HDG10; AltName: Full=Homeodomain
           GLABRA 2-like protein 10; AltName: Full=Homeodomain
           transcription factor HDG10; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 10
 gi|5668786|gb|AAD46012.1|AC007894_10 Similar to gb|Z54356 HD-ZIP protein (Athb-10) from Arabidopsis
           thaliana and contains a PF|00046 homeobox domain
           [Arabidopsis thaliana]
 gi|332193611|gb|AEE31732.1| homeobox-leucine zipper protein HDG10 [Arabidopsis thaliana]
          Length = 708

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 243/704 (34%), Positives = 363/704 (51%), Gaps = 57/704 (8%)

Query: 97  HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQ 156
           H+ HQ+Q +EAFF ECPHPDD QR++L  EL L+  Q+KFWFQN+RTQ +  +E+ +N  
Sbjct: 23  HSNHQVQRLEAFFHECPHPDDSQRRQLGNELNLKHKQIKFWFQNRRTQARIHNEKADNIA 82

Query: 157 LRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAI 216
           LR EN K+R  N    +AL    CP CGGP    E   +   LR +N  L+ E +R+S+ 
Sbjct: 83  LRVENMKIRCVNEAMEKALETVLCPPCGGPHGKEEQLCNLQKLRTKNVILKTEYERLSSY 142

Query: 217 AAKYVGKPVVNYPLLSPPVPSRPLELAVGNFG-------AQPGIGGGEMYGAADLLR--- 266
             K+ G  +       P V + P       +G       A  G     +   + LLR   
Sbjct: 143 LTKHGGYSI-------PSVDALPDLHGPSTYGSTSNNRPASYGSSSNHLPQQSSLLRRPF 195

Query: 267 -----------------SISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTA 309
                                 ++ +K  + E+A  A+ E++ + QM   +W+ S     
Sbjct: 196 TRELINTTPLPKPVLLQHFQQLSQLEKNRMFEIAKNAVAEVMSLIQMEHSMWIKSTIDGR 255

Query: 310 AVLNEDEYVRTFPRGIGPKPTGF---KCEASRETAVVIMNHISLVEILMDVNQWSTVFSG 366
           A+++   Y R F +    K         E+S E  VV M+  +LV++ ++  +W+ +F  
Sbjct: 256 AIIDPGNYKRYFTKNSHLKSRSALQSHHESSMEVVVVQMDARNLVDMFLNTEKWARLFPT 315

Query: 367 IVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVD 426
           IV+ A T+ VL +        + +V+  +  + SPLV  RE   +R C+Q  E  W + D
Sbjct: 316 IVTEAKTIHVLDSMDHPRQTFS-RVVYEQLHILSPLVLPREFIILRTCQQMKEDLWLIAD 374

Query: 427 VS--LDNLR-PSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQLVST 482
           VS  L N+   S A  C +RPSG LIQ +P+G SKVTW+EHVEV D+   H LY+ L+  
Sbjct: 375 VSCYLQNVEFESTAPICTKRPSGVLIQALPHGRSKVTWIEHVEVTDKVWPHQLYRDLLYG 434

Query: 483 GNAFGAKRWVATLDRQCERLASVMATNI-PTGEVGVITNQDGRKSMLKLAERMVISFCAG 541
           G  +GA+RW ATL R CERL+    T+  PT   GV+   +GR+S++ L ERM+ +F   
Sbjct: 435 GFGYGARRWTATLQRMCERLSLYSMTDFPPTDYPGVVKTIEGRRSVMSLGERMLKNFAWI 494

Query: 542 VSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRD 601
           +  S        SG     VR+  R +  + G+PPG+++ A +S  LP+PP +V+DFLR+
Sbjct: 495 MKMSDKLDLPQQSGANNSGVRISVRTNT-EAGQPPGLIVCAGSSLSLPLPPLQVYDFLRN 553

Query: 602 ENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDP 661
              R +WD+   G  V E A    G D  N V+      LQ ++  +  ++ILQ+   D 
Sbjct: 554 LEVRHQWDVHCQGNPVTEAARFVTGPDQKNNVTF-----LQPSSVGEYKLMILQDGFIDA 608

Query: 662 TASFVIYAPVDI-VAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLT 720
               V+YAP+++  A + +    DP  + +LPSGF I  D    H ++        +LLT
Sbjct: 609 LGGMVVYAPMNLNTAYSAISGQVDPSTIPILPSGFIISRDS---HPSSSEVDGGSMTLLT 665

Query: 721 VAFQILVDSVPTAKLSLG---SVATVNNLIACTVERIKASLSCE 761
           +AFQI V   P+    L    S  TVN L++  V+RIKA L+CE
Sbjct: 666 LAFQIFVTG-PSYYTDLNLKDSATTVNTLVSSAVQRIKAMLNCE 708


>gi|302398865|gb|ADL36727.1| HD domain class transcription factor [Malus x domestica]
          Length = 393

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 194/374 (51%), Positives = 255/374 (68%), Gaps = 26/374 (6%)

Query: 231 LSPPVPSRPLELAVGN--FGAQPGI----------GGGEMYGAADLLRSISAPT------ 272
           + PP+PS  LEL VG+  FG    +          GGG   G+A  + S   P+      
Sbjct: 1   MGPPLPSSTLELGVGSNGFGGMSNVATSMSMGNDFGGG--IGSAMSVVSHGRPSVTGLDR 58

Query: 273 EADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGF 332
             ++ + +ELA+AAM+EL++MAQ  EPLW+ SL+G   VLN +EY+R F   IG KP GF
Sbjct: 59  SMERSIFLELALAAMDELVKMAQTDEPLWLRSLEGGREVLNHEEYMRNFTPCIGLKPNGF 118

Query: 333 KCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVM 392
             EASRE+  VI+N ++LVE LMD N+W  +F G+++R  T +V+S+G+ G  NGALQ+M
Sbjct: 119 VSEASRESGTVIINSLTLVETLMDSNRWLEMFPGVLARTSTTDVISSGMGGTRNGALQLM 178

Query: 393 TAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAV----RCRRRPSGCL 448
            AE QV SPLVP RE  ++R+CKQH EG WAVVDVS+D +R +  V     CRR PSGC+
Sbjct: 179 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSVDAIRDTTGVPTFMNCRRLPSGCV 238

Query: 449 IQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMAT 508
           +Q+MPNGYSKVTWVEH E D+  VH+LY+ L+S+G  FGA+RWVATL RQ E  A +M++
Sbjct: 239 VQDMPNGYSKVTWVEHAEYDESQVHHLYRPLLSSGMGFGAQRWVATLQRQSECQAILMSS 298

Query: 509 NIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRK 567
            + + +   IT   GR+SMLKLA+RM  +FCAGV AST H WT L+    D DVRVMTR+
Sbjct: 299 CVTSRDHTAIT-ASGRRSMLKLAQRMTDNFCAGVCASTVHKWTKLNAGNVDEDVRVMTRE 357

Query: 568 SVDDPGRPPGIVLS 581
           S+DDPG PPG+VLS
Sbjct: 358 SLDDPGEPPGVVLS 371


>gi|338797895|gb|AEI99591.1| HD-Zip IV transcription factor GL9H2 [Triticum durum]
          Length = 683

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 232/708 (32%), Positives = 371/708 (52%), Gaps = 70/708 (9%)

Query: 62  REEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK 121
           R+ + D ++  S+  +GA G         K+R  R T  Q Q +E FF  C HPD+ QR 
Sbjct: 20  RDNDLDISQGNSDGQDGAEGS------QPKRRLQRLTPQQTQVLEGFFGICAHPDENQRM 73

Query: 122 ELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCP 181
            +S   GL   QV+FWFQNKRT MK    + E  +++ +NE LR +N R   A   + CP
Sbjct: 74  GMSESTGLTMQQVRFWFQNKRTHMKHVTGKEETYRMKAQNEMLREENKRLASAAKTSFCP 133

Query: 182 NC---GGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSR 238
           +C    G +  GE+      LR EN +L++++ ++ A A                P  SR
Sbjct: 134 SCVALPGLSPSGEV----QRLRQENEQLKQQLSQLRAEAH---------------PSSSR 174

Query: 239 PLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGE 298
           P +L        P             + +I+   E D   I ELA +AM E + +A+ G 
Sbjct: 175 PFQL-------DPS------------MENITG-RENDMDAIAELAQSAMHEFVVLAEAGG 214

Query: 299 PLWMTSLDGTAAVLNEDEYVRTF-PRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDV 357
           PLWM    G+  VLN+  Y +TF  R       GF  EA+R   +V+M+   +V+ +MD 
Sbjct: 215 PLWMPVPGGSFDVLNKMAYAQTFGARSSANVILGFMTEATRADDMVMMDAKQIVDYIMDS 274

Query: 358 NQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQH 417
             +++   G+++ A T ++     +  YNGA+ ++T E   PSPLVP+R+  +VR C+  
Sbjct: 275 ECYTSFCPGLLTSANTTKIYKWPTSAGYNGAMHLVTVETVFPSPLVPSRKCTFVRCCRDM 334

Query: 418 GEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYK 477
             GT  +VDVSLDN      V+C + PSG L++ + +  S+VT +EHV+V+D G+H LY+
Sbjct: 335 QNGTVIIVDVSLDN--GDGTVKCHKMPSGVLVRSLNSDASQVTVIEHVQVNDTGLHELYR 392

Query: 478 QLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVIS 537
             +S G  FGA+RWV+++ RQ  R+  +   +          N +GRK+++K+A+ ++  
Sbjct: 393 PSLS-GLMFGARRWVSSIVRQSARMRDLFVVSKSASN----GNTNGRKTLMKIADGLLAG 447

Query: 538 FCAGVSASTAHTWTTLSGTGA-DDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVF 596
           + +G++A     WT L G G  DD+R+  R++ DD       ++S   SF LPVP +  F
Sbjct: 448 YASGIAAVPGGGWTILRGAGTEDDIRISYRRNNDDSNTA---IVSVCASFHLPVPHRVTF 504

Query: 597 DFLRDENTRSEWDILSNGGVVQEMAHIANGRDTG--NCVSLLRVNCLQSANSSQSNMLIL 654
           D L++   R +WD+L NG  V+E   +  G   G  + VS+L +    +   ++ N++IL
Sbjct: 505 DLLKNNLLRPKWDVLVNGNSVREEVAVCKGVGGGIDDVVSILHLKDPPTG-ENRDNIMIL 563

Query: 655 QESCTDPTASFVIYAPVDIVAMNVVLNGGD---PDYVALLPSGFAILPDGTSLHGANIGE 711
           Q S  D + +F++Y PV+I  MN +++  D    + V+L P+GF +LP    +    +G 
Sbjct: 564 QNSSYDVSGAFMVYCPVNIQLMNEIMSPSDTAESNKVSLYPTGFYLLP----VEDTALGL 619

Query: 712 AASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
              G +L+TV FQI++       L   S +T   L+   +  IK +L+
Sbjct: 620 GEGGATLVTVGFQIMLKLARGTGLYPRSASTAVGLMTENIATIKKTLT 667


>gi|338797897|gb|AEI99592.1| HD-Zip IV transcription factor GL9 [Triticum aestivum]
          Length = 670

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 234/701 (33%), Positives = 359/701 (51%), Gaps = 69/701 (9%)

Query: 63  EEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE 122
           + E D  +S S+ H+GA G         K+R  R    Q Q +E FF  C HPD+ QR  
Sbjct: 18  DNELDIPQSNSDGHDGAEGS------QPKRRLQRLNPQQTQVLEGFFSICAHPDENQRMG 71

Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPN 182
           LS   GL   QVKFWFQNKRT MK    + E+ +++ +NE LR +N R   A   + CP+
Sbjct: 72  LSESTGLSMQQVKFWFQNKRTYMKHLTGKEESYRMKAQNEMLREENKRLASAAKASFCPS 131

Query: 183 CGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLEL 242
           C         S +   L+ EN  LR+++ ++ A  A  +    VN               
Sbjct: 132 CVALPGQNP-SVEVQRLKEENESLRQQVSQLRA-EAHQLDPSTVNI-------------- 175

Query: 243 AVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWM 302
                     IG                  E D   I EL   AM E + +++ G PLWM
Sbjct: 176 ----------IG-----------------RENDIDAIAELVQNAMHEFVVLSESGGPLWM 208

Query: 303 TSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWST 362
               G+  +LN+  Y +TF         GF+ EA+R   +V+M    +V+ +MD   +++
Sbjct: 209 PVPGGSLDLLNKVAYAQTFGARSSANAIGFRVEATRADGMVMMEAKQIVDYIMDSECYTS 268

Query: 363 VFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTW 422
              G ++ A T ++        YNGA+ +MTAE   PSPLVP+R+  +VR C+    GT 
Sbjct: 269 FCPGTLTSAKTTKIYKWPTNAGYNGAMHLMTAETVFPSPLVPSRKCTFVRCCRGMQNGTV 328

Query: 423 AVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVST 482
            +VDVSLDN       +CR+ PSG LI+ + +  S+VT +EHV+V+D GVH LY+  +S 
Sbjct: 329 IIVDVSLDN-GDGTFFKCRKMPSGLLIRSLNSDASQVTVIEHVQVNDAGVHELYRPTLS- 386

Query: 483 GNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGV 542
           G  FGA+RW+++++RQ  R+  +      T       N +GRK+++K+A+ ++  +  G+
Sbjct: 387 GLMFGARRWLSSIERQSARMRDLFLLTQSTSAA----NMNGRKTLMKIADDLLAGYANGI 442

Query: 543 SASTAHTWTTLSGTGA-DDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRD 601
           +A     WT L G G  DD+RV  R+  DD       V+S   +F LP+P +  FD LR+
Sbjct: 443 AAVPGGRWTILRGAGTEDDIRVTYRRKDDDDDTA---VVSVCAAFHLPLPLRMAFDLLRN 499

Query: 602 ENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDP 661
              R +WD+L NG  V+E   +  G    + VS+L +   +    +  N++ILQ S  D 
Sbjct: 500 IQLRPKWDVLVNGNSVREEVAVCKGVGGFDDVSILHI---KHNAENNENIMILQNSGYDV 556

Query: 662 TASFVIYAPVDIVAMNVVL---NGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSL 718
           + +F+IY PVDI  MN ++   + G+ + V+L P+GF++LP   S  G  +GE   G +L
Sbjct: 557 SGAFMIYCPVDIQLMNEIMSPSDMGESNKVSLYPTGFSLLPVDDSALG--LGEG--GATL 612

Query: 719 LTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           +T  +QIL+       L   SV+T  +L+   +  I+ +L+
Sbjct: 613 VTAGYQILLKLARGTGLYPRSVSTAVSLMTENIATIRKTLT 653


>gi|242054643|ref|XP_002456467.1| hypothetical protein SORBIDRAFT_03g036820 [Sorghum bicolor]
 gi|241928442|gb|EES01587.1| hypothetical protein SORBIDRAFT_03g036820 [Sorghum bicolor]
          Length = 760

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 240/704 (34%), Positives = 371/704 (52%), Gaps = 48/704 (6%)

Query: 62  REEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK 121
           R  E  S+ +G    +   GD Q+     K+  HR T  Q++ +E FF  C HPDD QR+
Sbjct: 83  RITEIGSSTAGKNKKK--RGDRQDGPQPNKRSLHRVTSQQLETLEGFFSICAHPDDNQRR 140

Query: 122 ELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCP 181
           +LS   GL   QVKFWFQNKRTQ+K  + R EN +L+ ENE L+ +N R ++  +N   P
Sbjct: 141 QLSESTGLLLHQVKFWFQNKRTQVKHLNGREENYKLKVENETLKEENNRLKQLQNNIIAP 200

Query: 182 NCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLE 241
               P A  +   D   L LE     +E++R+  +      +  +    +   +P   ++
Sbjct: 201 ---APCA--KCIIDPGRLLLE-----KEVERLKELNQMLQQELQLLKS-MDDGIPPMAMD 249

Query: 242 LAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLW 301
            AVGNF   P            LL +I    + D+ M+  LA  A +EL+ +A     LW
Sbjct: 250 SAVGNFHLDP------------LLENIFV-VQHDEQMLANLAQNAAQELLILANPSSALW 296

Query: 302 MTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWS 361
           +    G+   LN   Y  TFP  +         EA+R +AVV+++  SLVE LMD   + 
Sbjct: 297 LNVPGGSFETLNMAAYTETFPGQMSADTITMNTEATRASAVVMLDPKSLVEFLMDAESYG 356

Query: 362 TVFSGIVSRAMTLEVLS--TGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGE 419
           T+F G+VS A T +V S  TG    Y+GA+Q+MT E   PSPLV  R+  +VR  K+  +
Sbjct: 357 TMFPGLVSAAATTKVYSCPTGREECYDGAMQMMTVELVFPSPLVAARKCTFVRCVKKLEQ 416

Query: 420 GTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQL 479
           G  AVVDVSLD+       RCR+ PSG +IQ +     KVT ++HV VD    H+L+   
Sbjct: 417 GAVAVVDVSLDD-----GARCRKMPSGLVIQPIRYNTCKVTAIDHVVVDGTITHDLFAPC 471

Query: 480 VSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFC 539
           +S G  FGA+RW+ ++ RQC R+  V      T  V       GRK+++KLA+ ++ SF 
Sbjct: 472 LS-GLLFGARRWLTSMARQCARIRDVFQVTNCTLNV----TSRGRKTIMKLADNLLASFT 526

Query: 540 AGVSASTAHTWTTLSGTGAD-DVRVM--TRKSVDDPGRPPGIVLSAATSFWLPVPPKRVF 596
           + V+A     W    G G + D+++M  T+      G P  +V ++A SF +P+   + F
Sbjct: 527 SSVTAYPEDAWNFQCGLGTEQDIKIMYKTQNESTSSGSPTAVVCASA-SFLVPLHMGKAF 585

Query: 597 DFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQE 656
           + L++   R++WD+L NGG V+E   +A+G  +G+ VS+L V     AN  +  ++ILQ 
Sbjct: 586 ELLKNNMLRAKWDVLVNGGTVKEEVRVADGVGSGDAVSILHVKHGHGAN--RDTVMILQN 643

Query: 657 SCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP--DGTSLHGANIGEAAS 714
           +  D + +F++Y+ +D   + ++ +      ++L P+GF+++P  D     GA I  A  
Sbjct: 644 TFYDASGAFMVYSSLDKQLLEIIGDNQAMSNISLFPAGFSLVPLTDPAGHDGAGI--AQP 701

Query: 715 GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           G +++T  FQIL+       L   SV +V N++   +  IK +L
Sbjct: 702 GATVMTAGFQILMKLARGTGLCSRSVTSVINIMTDNIANIKDAL 745


>gi|147780460|emb|CAN74911.1| hypothetical protein VITISV_007605 [Vitis vinifera]
          Length = 715

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 219/564 (38%), Positives = 315/564 (55%), Gaps = 70/564 (12%)

Query: 239 PLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGE 298
           P E  + +F ++ G+G  +     +LL S+S   EA K  I+ LA+ AM+EL +MA   +
Sbjct: 166 PQETEIKHFWSRTGVGM-DSERERNLLISVSVGIEAYKLKILGLAIEAMKELTKMATEKQ 224

Query: 299 PLWMTSLDGTAAVLNEDEYVRTFP----------RGIG----PKPTGFKC---------- 334
           PLW  S+DG   VL+  EY + F           R IG     +P    C          
Sbjct: 225 PLWQASIDG--KVLSHMEYTKQFGQVDATLEMVIRKIGMQQPVQPPNLSCPTHIPALPNV 282

Query: 335 ---------EASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                    EASRET  ++ + + +VE+LM+ +Q+S VFS IVS++  L VLST   G+Y
Sbjct: 283 EIHTQPLQTEASRETRFLLADPVHIVELLMNNDQYSPVFSNIVSKSKVLGVLSTQAQGDY 342

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPS 445
           NGALQVM  EF  PSPLVP RE Y  RY +      W VVDVSL++L P+P +R +RRPS
Sbjct: 343 NGALQVMAVEFHAPSPLVPNRECYLARYSRCLSNNVWGVVDVSLESLFPNPLIRYQRRPS 402

Query: 446 GCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASV 505
           GCLJ++      KV WVEH EVD+  V  + +  V++G+A+GAK+W++TL RQ ERL  +
Sbjct: 403 GCLJEQFQXRLCKVIWVEHSEVDNSSVPEVCQHFVTSGHAYGAKQWLSTLVRQHERLTYI 462

Query: 506 MATN-------IPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWT-TLSGTG 557
           M  N       +PTGE          +++L LA+RM+ SF   +SAS  + W      +G
Sbjct: 463 MVRNDRRPQQLVPTGE----------ENLLTLADRMMRSFWRNLSASRKNQWDGQYHWSG 512

Query: 558 ADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRS-----EWDILS 612
           A+++  + R   D  GR PG  L  AT+  +P   +R+FDFL+DEN+R+     +WDIL+
Sbjct: 513 AENIEAIIRFVKDKEGRXPGPALVMATTIXIPASSRRIFDFLQDENSRNKLLDLQWDILT 572

Query: 613 NGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVD 672
           +G +VQ+   I+NG   GN VS+L V   +  + +   +  LQES T   +S+V + PV+
Sbjct: 573 HGHIVQQTRSISNGCVPGNRVSVLEVKSAEDPDRTIKTL--LQESFTTSDSSYVTFTPVE 630

Query: 673 IVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPT 732
             + ++ LNGGDPD V ++PSGF+I PDG +            GSL+T+ FQIL  +   
Sbjct: 631 ASSFSMTLNGGDPDNVPVMPSGFSISPDGPT---------GDEGSLVTIVFQILDGTASP 681

Query: 733 AKLSLGSVATVNNLIACTVERIKA 756
                 SV T+  LI  T + I A
Sbjct: 682 MHXPSHSVGTMYKLITETAKSITA 705


>gi|22023157|gb|AAM88945.1|AF317882_1 transcription factor 1 [Oryza sativa]
          Length = 709

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 234/684 (34%), Positives = 358/684 (52%), Gaps = 64/684 (9%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +K+R  R T  Q + +E FF  C HPDD Q++ LS   GL   QVKFWFQNKRTQ+KT  
Sbjct: 66  RKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVKTMC 125

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREE 209
            + EN +L  ENE LR +N R + A   A C  C   +   +++ +   L  ++  L++E
Sbjct: 126 WKEENYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEWLQQE 185

Query: 210 IDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSIS 269
           I R +                 +PP  +   +L                  +AD + S  
Sbjct: 186 IARSNG----------------TPPAANLAFQLN----------------SSADYVFS-- 211

Query: 270 APTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKP 329
              + D+ MI ELA  AM  LI +A+    LW      +  VLN+  Y + +P       
Sbjct: 212 --GQHDQQMIAELAKNAMHALIILAESHVALWFPVPGCSYEVLNKMAYDQAYPGDNSANA 269

Query: 330 TGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGAL 389
            GFK EA+R  ++V+M++ S+V+ LMD   + T F  ++S A+T  + +   +  YNG +
Sbjct: 270 IGFKTEATRAVSMVMMDYKSVVDFLMDPYNYRTFFPEVISGAVTNRIYTWPTSDGYNGVI 329

Query: 390 QVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLI 449
           Q+MT E   PSPLVP R+  ++RYC    EG   V+DVSLD+   S   +CR+ PSG LI
Sbjct: 330 QLMTVEMMFPSPLVPARKCTFLRYCNVLNEGLVVVIDVSLDD--GSIFSKCRKMPSGFLI 387

Query: 450 QEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATN 509
           Q +     KVT +EHV  DD GVH LY+  V+ G  FGA+RWVAT+ RQ  R+      +
Sbjct: 388 QSIRPNSCKVTAIEHVLADDTGVHELYQPRVN-GLVFGARRWVATMARQSARM-----RD 441

Query: 510 IPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKS 568
           +   +     +  GRK+++KLA+ ++ SF  G++A+   TWT + G G + D+RV  R++
Sbjct: 442 VHHNKTAPQVSTKGRKNLMKLADDLLASFAGGIAATGGGTWTVVIGAGTEKDIRVAYRRT 501

Query: 569 VDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRD 628
            +       I LS   S  LP+P ++ FD LR+   R +WD+L +G VV+E   IA G  
Sbjct: 502 TEGSSSYNAI-LSVTASLRLPLPMRKTFDLLRNLTHRCKWDVLVHGSVVKEEVTIARGVG 560

Query: 629 TGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVL-------- 680
             + V++L  +C ++    +   +ILQ +  D + SF++Y+ +D   MN ++        
Sbjct: 561 NDDTVTVL--HCKRAGREDRGRTMILQNNGYDASGSFMVYSQIDSELMNTMVLSPSDLPP 618

Query: 681 NGGDPDYVALLPSGFAILPDGTSLH---GANIGEAASGGSLLTVAFQILVDSVPTAKLSL 737
             G P   +L P+GF++LPD  +     G  +GE   GG+L+T+ FQI V      ++  
Sbjct: 619 GRGGP---SLYPTGFSLLPDVEAAQDSSGIALGEV--GGTLMTMGFQIPVKLASGDRMYS 673

Query: 738 GSVATVNNLIACTVERIKASLSCE 761
            S A+   L+  T+  +K +L  E
Sbjct: 674 RSAASAIRLMTDTIALVKKTLMNE 697


>gi|115440407|ref|NP_001044483.1| Os01g0788800 [Oryza sativa Japonica Group]
 gi|75252913|sp|Q5ZAY0.1|TF1_ORYSJ RecName: Full=Homeobox-leucine zipper protein TF1; AltName:
           Full=HD-ZIP protein TF1; AltName: Full=Homeodomain
           transcription factor TF1; AltName: Full=Protein
           TRANSCRIPTION FACTOR 1; Short=OsTF1
 gi|53792430|dbj|BAD53268.1| transcription factor 1 [Oryza sativa Japonica Group]
 gi|56784272|dbj|BAD81954.1| transcription factor 1 [Oryza sativa Japonica Group]
 gi|113534014|dbj|BAF06397.1| Os01g0788800 [Oryza sativa Japonica Group]
          Length = 709

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 233/684 (34%), Positives = 358/684 (52%), Gaps = 64/684 (9%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +K+R  R T  Q + +E FF  C HPDD Q++ LS   GL   QVKFWFQNKRTQ+KT  
Sbjct: 66  RKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVKTMC 125

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREE 209
            + EN +L  ENE LR +N R + A   A C  C   +   +++ +   L  ++  L++E
Sbjct: 126 WKEENYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEWLQQE 185

Query: 210 IDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSIS 269
           I R +                 +PP  +   +L                  +AD + S  
Sbjct: 186 IARSNG----------------TPPAANLAFQLN----------------SSADYVFS-- 211

Query: 270 APTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKP 329
              + D+ MI ELA  AM  LI +A+    LW      +  VLN+  Y + +P       
Sbjct: 212 --GQHDQQMIAELAKNAMHALIILAESHVALWFPVPGCSYEVLNKMAYDQAYPGDNSANA 269

Query: 330 TGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGAL 389
            GFK EA+R  ++V+M++ S+V+ LMD   + T F  ++S A+T  + +   +  YNG +
Sbjct: 270 IGFKTEATRAVSMVMMDYKSVVDFLMDPYNYRTFFPEVISGAVTNRIYTWPTSDGYNGVI 329

Query: 390 QVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLI 449
           Q+MT E   PSPLVP R+  ++RYC    EG   V+DVSLD+   S   +CR+ PSG LI
Sbjct: 330 QLMTVEMMFPSPLVPARKCTFLRYCNVLNEGLVVVIDVSLDD--GSIFSKCRKMPSGFLI 387

Query: 450 QEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATN 509
           Q +     KVT +EHV  DD GVH LY+  ++ G  FGA+RWVAT+ RQ  R+      +
Sbjct: 388 QSIRPNSCKVTAIEHVLADDTGVHELYQPCMN-GLVFGARRWVATMARQSARM-----RD 441

Query: 510 IPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKS 568
           +   +     +  GRK+++KLA+ ++ SF  G++A+   TWT + G G + D+RV  R++
Sbjct: 442 VHHNKTAPQVSTKGRKNLMKLADDLLASFAGGIAATGGGTWTVVIGAGTEKDIRVAYRRT 501

Query: 569 VDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRD 628
            +       I LS   S  LP+P ++ FD LR+   R +WD+L +G VV+E   IA G  
Sbjct: 502 TEGSSSYNAI-LSVTASLRLPLPMRKTFDLLRNLTHRCKWDVLVHGSVVKEEVTIARGVG 560

Query: 629 TGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVL-------- 680
             + V++L  +C ++    +   +ILQ +  D + SF++Y+ +D   MN ++        
Sbjct: 561 NDDTVTVL--HCKRAGREDRGRTMILQNNGYDASGSFMVYSQIDSELMNTMVLSPSDLPP 618

Query: 681 NGGDPDYVALLPSGFAILPDGTSLH---GANIGEAASGGSLLTVAFQILVDSVPTAKLSL 737
             G P   +L P+GF++LPD  +     G  +GE   GG+L+T+ FQI V      ++  
Sbjct: 619 GRGGP---SLYPTGFSLLPDVEAAQDSSGIALGEV--GGTLMTMGFQIPVKLASGDRMYS 673

Query: 738 GSVATVNNLIACTVERIKASLSCE 761
            S A+   L+  T+  +K +L  E
Sbjct: 674 RSAASAIRLMTDTIALVKKTLMNE 697


>gi|357131135|ref|XP_003567196.1| PREDICTED: homeobox-leucine zipper protein TF1-like [Brachypodium
           distachyon]
          Length = 710

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 251/740 (33%), Positives = 384/740 (51%), Gaps = 82/740 (11%)

Query: 51  QNTSESEIARLREEEFDSTKSG---SENHEGASGD-DQEQRPNKKKRYHRHTQHQIQEME 106
           +  SESE   L  E ++   SG   S  + G S D D  +RP ++K+  R T  Q   +E
Sbjct: 2   RQVSESEQQALGNEYYEEQDSGILPSNGNGGPSADQDDPERPRRRKKLRRLTYQQNLILE 61

Query: 107 AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE---------------- 150
            FF  C HPDD QR+ LS   GL   QVKFWFQNKRT+ K   +                
Sbjct: 62  GFFGICAHPDDSQRRHLSGATGLSMQQVKFWFQNKRTKAKLTIKYAFINYSFPVISLLLQ 121

Query: 151 ----RHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARL 206
               + EN  L   N KL A+N + +EA  NA CPNC G  +  ++  +   LR  N  L
Sbjct: 122 NDLGKQENYDLIVYNNKLTAENRKLKEAHRNALCPNCIGSPSHHQVYAEMERLRETNVFL 181

Query: 207 REEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYG--AADL 264
           ++++ R+                                + G Q        +G  A D 
Sbjct: 182 KQQLSRL--------------------------------HVGIQRSSSSSFQFGMSAED- 208

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRG 324
             +I+A  E    +I  LA  AM E   +     PLW+    G+  +LNE  Y +     
Sbjct: 209 --AIAAQNET--LIIAVLAEIAMREFGSLINTNGPLWLPVHGGSLEILNEGAYAQECDIT 264

Query: 325 IGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLS-TGVAG 383
                 GF+ EA+R  AVV+M+  ++VE LMD   + +   GI+S A T++V S   ++G
Sbjct: 265 NMANLIGFRTEATRAEAVVLMDPQNVVEYLMDSECYGSFCPGILSSAKTIKVYSWPSISG 324

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRR 443
           NY+GA+ +MT E   PSPLVP+R+  ++R C++   G   +VD+SLD+   S + +C + 
Sbjct: 325 NYDGAMHLMTTETVFPSPLVPSRKCTFLRCCRELPGGAMVIVDMSLDDGGGS-SFKCCKM 383

Query: 444 PSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLA 503
           PSG LIQ +     KVT +EHV V D G+H LY+  + TG  FGA+RWV ++ RQ  R+ 
Sbjct: 384 PSGVLIQPIMANSCKVTAIEHVRVVDTGLHELYQPCL-TGLMFGARRWVESMARQSARMR 442

Query: 504 SVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD-DVR 562
           ++   N+      V     G+K+++KLA+ +V+S+   ++      WTTL G+G + D++
Sbjct: 443 ALFDVNVNYSGRNVCPK--GKKTLMKLADSLVVSYARSMANLPVGAWTTLCGSGTEQDIK 500

Query: 563 VMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAH 622
           V  ++  +D G    +V S + SF LP+P +  FD LR+   R++WD+L++GG V+E   
Sbjct: 501 VAHKR--NDDGSNTSVV-SVSASFHLPIPLRVTFDLLRNNVLRAKWDVLASGGAVREENL 557

Query: 623 IANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNG 682
           +  G  + + VS+L V   ++A   + N++ILQ S  D + SF++YAPVD + +N ++  
Sbjct: 558 VCKGTGSNDNVSILHV---KAATGDKGNLMILQNSWYDVSGSFIVYAPVDSMLINRIIGP 614

Query: 683 GD--PDYVALLPSGFAILP-DGTSLHG-ANIGEAASGGSLLTVAFQILVDSVPTAKLSLG 738
           GD     + L P+G A+LP  GT+L G A +G+   G +++TV FQILV        S  
Sbjct: 615 GDVAEGELPLFPTGLALLPVGGTALQGQAPLGD--DGETIVTVGFQILVRHAQDDVFS-K 671

Query: 739 SVATVNNLIACTVERIKASL 758
           ++ T   L+A  +  IK +L
Sbjct: 672 TLQTAVALMADNIATIKRTL 691


>gi|53792431|dbj|BAD53269.1| putative transcription factor 1 [Oryza sativa Japonica Group]
 gi|56784273|dbj|BAD81955.1| putative transcription factor 1 [Oryza sativa Japonica Group]
          Length = 629

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 228/669 (34%), Positives = 349/669 (52%), Gaps = 64/669 (9%)

Query: 105 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
           M  FF  C HPDD Q++ LS   GL   QVKFWFQNKRTQ+KT   + EN +L  ENE L
Sbjct: 1   MNRFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVKTMCWKEENYKLSVENEIL 60

Query: 165 RADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKP 224
           R +N R + A   A C  C   +   +++ +   L  ++  L++EI R +          
Sbjct: 61  RDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEWLQQEIARSNG--------- 111

Query: 225 VVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAV 284
                  +PP  +   +L                  +AD + S     + D+ MI ELA 
Sbjct: 112 -------TPPAANLAFQLN----------------SSADYVFS----GQHDQQMIAELAK 144

Query: 285 AAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVI 344
            AM  LI +A+    LW      +  VLN+  Y + +P        GFK EA+R  ++V+
Sbjct: 145 NAMHALIILAESHVALWFPVPGCSYEVLNKMAYDQAYPGDNSANAIGFKTEATRAVSMVM 204

Query: 345 MNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVP 404
           M++ S+V+ LMD   + T F  ++S A+T  + +   +  YNG +Q+MT E   PSPLVP
Sbjct: 205 MDYKSVVDFLMDPYNYRTFFPEVISGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVP 264

Query: 405 TRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEH 464
            R+  ++RYC    EG   V+DVSLD+   S   +CR+ PSG LIQ +     KVT +EH
Sbjct: 265 ARKCTFLRYCNVLNEGLVVVIDVSLDD--GSIFSKCRKMPSGFLIQSIRPNSCKVTAIEH 322

Query: 465 VEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGR 524
           V  DD GVH LY+  ++ G  FGA+RWVAT+ RQ  R+      ++   +     +  GR
Sbjct: 323 VLADDTGVHELYQPCMN-GLVFGARRWVATMARQSARM-----RDVHHNKTAPQVSTKGR 376

Query: 525 KSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGRPPGIVLSAA 583
           K+++KLA+ ++ SF  G++A+   TWT + G G + D+RV  R++ +       I LS  
Sbjct: 377 KNLMKLADDLLASFAGGIAATGGGTWTVVIGAGTEKDIRVAYRRTTEGSSSYNAI-LSVT 435

Query: 584 TSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQS 643
            S  LP+P ++ FD LR+   R +WD+L +G VV+E   IA G    + V++L  +C ++
Sbjct: 436 ASLRLPLPMRKTFDLLRNLTHRCKWDVLVHGSVVKEEVTIARGVGNDDTVTVL--HCKRA 493

Query: 644 ANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVL--------NGGDPDYVALLPSGF 695
               +   +ILQ +  D + SF++Y+ +D   MN ++          G P   +L P+GF
Sbjct: 494 GREDRGRTMILQNNGYDASGSFMVYSQIDSELMNTMVLSPSDLPPGRGGP---SLYPTGF 550

Query: 696 AILPDGTSLH---GANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVE 752
           ++LPD  +     G  +GE   GG+L+T+ FQI V      ++   S A+   L+  T+ 
Sbjct: 551 SLLPDVEAAQDSSGIALGEV--GGTLMTMGFQIPVKLASGDRMYSRSAASAIRLMTDTIA 608

Query: 753 RIKASLSCE 761
            +K +L  E
Sbjct: 609 LVKKTLMNE 617


>gi|125572285|gb|EAZ13800.1| hypothetical protein OsJ_03723 [Oryza sativa Japonica Group]
          Length = 679

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 227/666 (34%), Positives = 348/666 (52%), Gaps = 64/666 (9%)

Query: 108 FFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRAD 167
           FF  C HPDD Q++ LS   GL   QVKFWFQNKRTQ+KT   + EN +L  ENE LR +
Sbjct: 28  FFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVKTMCWKEENYKLSVENEILRDE 87

Query: 168 NMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVN 227
           N R + A   A C  C   +   +++ +   L  ++  L++EI R +             
Sbjct: 88  NRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEWLQQEIARSNG------------ 135

Query: 228 YPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAM 287
               +PP  +   +L                  +AD + S     + D+ MI ELA  AM
Sbjct: 136 ----TPPAANLAFQLN----------------SSADYVFS----GQHDQQMIAELAKNAM 171

Query: 288 EELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNH 347
             LI +A+    LW      +  VLN+  Y + +P        GFK EA+R  ++V+M++
Sbjct: 172 HALIILAESHVALWFPVPGCSYEVLNKMAYDQAYPGDNSANAIGFKTEATRAVSMVMMDY 231

Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
            S+V+ LMD   + T F  ++S A+T  + +   +  YNG +Q+MT E   PSPLVP R+
Sbjct: 232 KSVVDFLMDPYNYRTFFPEVISGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARK 291

Query: 408 SYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEV 467
             ++RYC    EG   V+DVSLD+   S   +CR+ PSG LIQ +     KVT +EHV  
Sbjct: 292 CTFLRYCNVLNEGLVVVIDVSLDD--GSIFSKCRKMPSGFLIQSIRPNSCKVTAIEHVLA 349

Query: 468 DDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSM 527
           DD GVH LY+  ++ G  FGA+RWVAT+ RQ  R+      ++   +     +  GRK++
Sbjct: 350 DDTGVHELYQPCMN-GLVFGARRWVATMARQSARM-----RDVHHNKTAPQVSTKGRKNL 403

Query: 528 LKLAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGRPPGIVLSAATSF 586
           +KLA+ ++ SF  G++A+   TWT + G G + D+RV  R++ +       I LS   S 
Sbjct: 404 MKLADDLLASFAGGIAATGGGTWTVVIGAGTEKDIRVAYRRTTEGSSSYNAI-LSVTASL 462

Query: 587 WLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANS 646
            LP+P ++ FD LR+   R +WD+L +G VV+E   IA G    + V++L  +C ++   
Sbjct: 463 RLPLPMRKTFDLLRNLTHRCKWDVLVHGSVVKEEVTIARGVGNDDTVTVL--HCKRAGRE 520

Query: 647 SQSNMLILQESCTDPTASFVIYAPVDIVAMNVVL--------NGGDPDYVALLPSGFAIL 698
            +   +ILQ +  D + SF++Y+ +D   MN ++          G P   +L P+GF++L
Sbjct: 521 DRGRTMILQNNGYDASGSFMVYSQIDSELMNTMVLSPSDLPPGRGGP---SLYPTGFSLL 577

Query: 699 PDGTSLH---GANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIK 755
           PD  +     G  +GE   GG+L+T+ FQI V      ++   S A+   L+  T+  +K
Sbjct: 578 PDVEAAQDSSGIALGEV--GGTLMTMGFQIPVKLASGDRMYSRSAASAIRLMTDTIALVK 635

Query: 756 ASLSCE 761
            +L  E
Sbjct: 636 KTLMNE 641


>gi|356528152|ref|XP_003532669.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 784

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 197/502 (39%), Positives = 296/502 (58%), Gaps = 18/502 (3%)

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF-PRGIG 326
           I+   + D  M+ ++A  A+EELI++  M +P W  S+     VL  D Y      R   
Sbjct: 290 INQRIDLDNAMMSQIANNAIEELIKLLDMNQPFW--SIHDWKLVLKRDNYQSILGRRHCL 347

Query: 327 PKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
           P P   + E+S+++ +V MN   LV++ M++ +W  +F  IV++A T++VL  G+ GN +
Sbjct: 348 PGPHA-RIESSKDSRIVDMNAEQLVQMFMNLEKWVDLFPTIVTKAQTIQVLENGLVGNRS 406

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAV-RCRRRPS 445
           GAL ++ AE  + S LVPTR+ Y++RYCKQ  EG W + DVS+D+L     V R  RRPS
Sbjct: 407 GALLLINAEMHILSHLVPTRQFYFLRYCKQIKEGVWVIGDVSIDSLEYKTIVPRIWRRPS 466

Query: 446 GCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQLVSTGNAFGAKRWVATLDRQCERLAS 504
           GCLIQEM +G  KV+WVEHVEVDD+   H L+  ++   NA+GA+RW++TL R CER A 
Sbjct: 467 GCLIQEMNHGLCKVSWVEHVEVDDKMQTHQLFTDVICCNNAYGAERWLSTLKRMCERFAC 526

Query: 505 VMATNIPT-GEVG-VITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD-DV 561
             A  IP+  E G  I + +G+KS++ LA RMV +FC  +  S    +  L+    + +V
Sbjct: 527 ASAETIPSCDESGEAILSLEGKKSVMHLAHRMVKTFCRTLDVSDCENFPYLTRMMNNGEV 586

Query: 562 RVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMA 621
            ++ RK+  +   P G++LSAATSF LP  P+ VFDFL D   R++W+    G    E+ 
Sbjct: 587 TIIVRKNNSEQDVPQGLILSAATSFLLPHSPENVFDFLIDNKKRAKWEPFWYGKPGHEIQ 646

Query: 622 HIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLN 681
            I+ G + GN +S+ +     +   S +NM++LQES  D   S ++Y+  D   MN  + 
Sbjct: 647 RISTGNNPGNFISITK-----ALGPSDNNMIVLQESYADGLGSMMVYSAFDTETMNFAMR 701

Query: 682 GGDPDYVALLPSGFAILPDGTS--LHGANIGEAASGGSLLTVAFQILVDSVPTAKL-SLG 738
           G D   + +LPSGF I  DG S    G +  +  S GSL+T+  Q+L  S P+  +  + 
Sbjct: 702 GEDTSQLLVLPSGFTISGDGHSNAFEGQS-RQVVSKGSLVTLMLQVLASSTPSMDMIDME 760

Query: 739 SVATVNNLIACTVERIKASLSC 760
            V +V  L++ TVE+IKA+L+C
Sbjct: 761 FVGSVTTLVSSTVEKIKAALNC 782



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 81/125 (64%), Gaps = 1/125 (0%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERH 152
           R +R     + ++EA F+ECP+P++ +R+++S EL L   QVKFWFQN++T++K   ER 
Sbjct: 11  RGNRLNHATVSKLEAIFRECPYPNENRRRQISEELELSLNQVKFWFQNRKTKLKAISERI 70

Query: 153 ENTQLRTENEKLRADNMRYREALSNASCPNCGG-PTAIGEMSFDEHHLRLENARLREEID 211
           +N  LR ENE ++++N+  RE+L NA C +CGG P    E       L+ +N +L +E +
Sbjct: 71  DNNALRRENENIQSENLLMRESLQNAFCLSCGGLPVGSVERKLQLQSLKAKNIQLAKEYE 130

Query: 212 RISAI 216
           R+ A+
Sbjct: 131 RVYAL 135


>gi|125527992|gb|EAY76106.1| hypothetical protein OsI_04032 [Oryza sativa Indica Group]
          Length = 736

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 233/685 (34%), Positives = 358/685 (52%), Gaps = 65/685 (9%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +K+R  R T  Q + +E FF  C HPDD Q++ LS   GL   QVKFWFQNKRTQ+KT  
Sbjct: 66  RKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVKTMC 125

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREE 209
            + EN +L  ENE LR +N R + A   A C  C   +   +++ +   L  ++  L++E
Sbjct: 126 WKEENYKLSVENEILRDENRRVKIAHCTAICLTCRNSSVQNQLAVEMERLMGQSEWLQQE 185

Query: 210 IDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSIS 269
           I R +                 +PP  +   +L                  +AD + S  
Sbjct: 186 IARSNG----------------TPPAANLAFQLN----------------SSADYVFS-- 211

Query: 270 APTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNED-EYVRTFPRGIGPK 328
              + D+ MI ELA  AM  LI +A+    LW         VLN+   Y + +P      
Sbjct: 212 --GQHDQQMIAELAKNAMHALIILAESHVALWFPVPGCAYEVLNKMMAYDQAYPGDNSAN 269

Query: 329 PTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGA 388
             GFK EA+R  ++V+M++ S+V+ LMD   + T F  ++S A+T  + +   +  YNG 
Sbjct: 270 AIGFKTEATRAVSMVMMDYKSVVDFLMDPYNYRTFFPEVISGAVTNRIYTWPTSDGYNGV 329

Query: 389 LQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCL 448
           +Q+MT E   PSPLVP R+  ++RYC    EG   V+DVSLD+   S   +CR+ PSG L
Sbjct: 330 IQLMTVEMMFPSPLVPARKCTFLRYCNVLNEGLVVVIDVSLDD--GSIFSKCRKMPSGFL 387

Query: 449 IQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMAT 508
           IQ +     KVT +EHV  DD GVH LY+  ++ G  FGA+RWVAT+ RQ  R+      
Sbjct: 388 IQSIRPNSCKVTAIEHVLADDTGVHELYQPCMN-GLVFGARRWVATMARQSARM-----R 441

Query: 509 NIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRK 567
           ++   +     +  GRK+++KLA+ ++ SF  G++A+   TWT + G G + D+RV  R+
Sbjct: 442 DVHHNKTAPQVSTKGRKNLMKLADDLLASFAGGITATGGGTWTVVIGAGTEKDIRVAYRR 501

Query: 568 SVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGR 627
           + +       I LS + S  LP+P ++ FD LR+   R +WD+L +G VV+E   IA G 
Sbjct: 502 TTEGSSSYNAI-LSVSASLRLPLPMRKTFDLLRNLTHRCKWDVLVHGSVVKEEVTIARGV 560

Query: 628 DTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVL------- 680
              + V++L  +C ++    +   +ILQ +  D + SF++Y+ +D   MN ++       
Sbjct: 561 GNDDTVTVL--HCKRAGREDRGRTMILQNNGYDASGSFMVYSQIDSELMNTMVLSPSDLP 618

Query: 681 -NGGDPDYVALLPSGFAILPDGTSLH---GANIGEAASGGSLLTVAFQILVDSVPTAKLS 736
              G P   +L P+GF++LPD  +     G  +GE   GG+L+T+ FQI V      ++ 
Sbjct: 619 PGRGGP---SLYPTGFSLLPDVEAAQDSSGIALGEV--GGTLMTMGFQIPVKLASGDRMY 673

Query: 737 LGSVATVNNLIACTVERIKASLSCE 761
             S A+   L+  T+  +K +L  E
Sbjct: 674 SRSAASAIRLMTDTIALVKKTLMNE 698


>gi|15983360|gb|AAL11548.1|AF424554_1 At1g17920/F2H15_22 [Arabidopsis thaliana]
 gi|24111361|gb|AAN46804.1| At1g17920/F2H15_22 [Arabidopsis thaliana]
          Length = 406

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 183/396 (46%), Positives = 254/396 (64%), Gaps = 17/396 (4%)

Query: 73  SENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPL 132
           S+NH+ +   + E++  KKKR+HRHT HQIQ +E+ F EC HPD+KQR +LSRELGL P 
Sbjct: 7   SQNHDSS---ETEKKNKKKKRFHRHTPHQIQRLESTFNECQHPDEKQRNQLSRELGLAPR 63

Query: 133 QVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEM 192
           Q+KFWFQN+RTQ K QHER +N  L+ EN+K+R +N+  REA+ +A CP+CG      + 
Sbjct: 64  QIKFWFQNRRTQKKAQHERADNCALKEENDKIRCENIAIREAIKHAICPSCGDSPVNEDS 123

Query: 193 SFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPG 252
            FDE  LR+ENA+LR+E++R+S+IAAK++G+P+ + P L  P+   PLEL    F   P 
Sbjct: 124 YFDEQKLRIENAQLRDELERVSSIAAKFLGRPISHLPPLLNPMHVSPLEL----FHTGPS 179

Query: 253 IGGGEMYGAADLLRSISAP-------TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSL 305
           +    + G+   +   S P       +E DK ++  +AV AMEEL+R+ Q  EPLW+ + 
Sbjct: 180 LDFDLLPGSCSSMSVPSLPSQPNLVLSEMDKSLMTNIAVTAMEELLRLLQTNEPLWIKT- 238

Query: 306 DGTAAVLNEDEYVRTFPRG--IGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTV 363
           DG   VLN + Y   F R    G K      EASR + VV  N I+LV++LM+  + + +
Sbjct: 239 DGCRDVLNLENYENMFTRSSTSGGKKNNLGMEASRSSGVVFTNAITLVDMLMNSVKLTEL 298

Query: 364 FSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWA 423
           F  IV+ + TL V+S+G+ GN+  AL +M  E QV SPLV TRE   +RYC+Q   GTWA
Sbjct: 299 FPSIVASSKTLAVISSGLRGNHGDALHLMIEELQVLSPLVTTREFCVLRYCQQIEHGTWA 358

Query: 424 VVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKV 459
           +V+VS +  +     R  R PSGCLIQ+M NGYSKV
Sbjct: 359 IVNVSYEFPQFISQSRSYRFPSGCLIQDMSNGYSKV 394


>gi|357448581|ref|XP_003594566.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355483614|gb|AES64817.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 660

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 230/691 (33%), Positives = 360/691 (52%), Gaps = 53/691 (7%)

Query: 80  SGDDQE-QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWF 138
           SGD+++    N+ KR  RH+  QI ++E  FK   HPDD Q+ E++++L LEP QVK+WF
Sbjct: 4   SGDEEDSDNSNESKRVCRHSADQILKLEEIFKTLTHPDDNQKYEIAQQLELEPQQVKWWF 63

Query: 139 QNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASC-PNCGGPTAIGEMSFDEH 197
           QNKR  +K ++ +  N  LR ENE++  +NM  +E L N  C  +C G  ++ +      
Sbjct: 64  QNKRAHIKNKNLKPANDALRAENERILKENMEMKERLKNLLCQSSCNGSNSLKQ------ 117

Query: 198 HLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGE 257
            L++ENARL+E   R   +  K V                  LEL +G          G 
Sbjct: 118 -LQVENARLKE---RYEMMQKKEVS-----------------LELKLG---LPKSSTRGS 153

Query: 258 MYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEY 317
                D   S  +  E   PM++   +AA EEL+++ +  E LW+ S      VL E  Y
Sbjct: 154 TSLNLDRGSSSKSSLEIQNPMMLVAGLAATEELLKLFR-DESLWVKSQLNRRLVL-EKNY 211

Query: 318 VRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVL 377
              FPR           E+S+++ ++ +    LVE+ +D  +W+ +F  IV++A T++VL
Sbjct: 212 EDVFPRVDHFNGAKTHVESSKDSQMLKIGATHLVEMFLDSEKWANLFPTIVNKAETIKVL 271

Query: 378 STGVAGNYNGALQV------MTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN 431
               + N +GAL +      M  E  V SPLV  R+ Y++RYC Q   G W + DVS D 
Sbjct: 272 ERDSSQNQSGALLLGLCYVQMHGEMHVLSPLVKPRQFYFLRYCVQVEAGIWVIADVSYDY 331

Query: 432 LRPS-PAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQLVSTGNAFGAK 489
           L+   P     R PSGC+IQ++ N  SKV+W+EHVEVD +   H++Y+ +V+   AFGA+
Sbjct: 332 LKEDGPHSSFWRFPSGCMIQQISNETSKVSWIEHVEVDLKIQTHSMYRDIVNNAIAFGAE 391

Query: 490 RWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHT 549
           RW+  L R  ER  S     +   + GVIT  +G++ ++KLA +++  F   ++ S+   
Sbjct: 392 RWLMELRRIGERCGSAALEYMHFYDNGVITLPEGKRCVMKLAHQVLKEFSKNLTMSSKSD 451

Query: 550 W-TTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
               ++ T    VR   RK+ +        ++  A+S  LP+P   VFDFLRD   R EW
Sbjct: 452 LPQYIADTDDSGVRFSIRKNRNLFLSNDPFIVIVASSVSLPLPSHTVFDFLRDPARRFEW 511

Query: 609 DILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIY 668
           D   +G    E+AHI+ G    + VS+++       +  +  + I+QE   DP  S+V+Y
Sbjct: 512 DKFCDGNPWHEIAHISTGTHPNHYVSIIQ----PLVSPPKDGVKIIQECFIDPLGSYVVY 567

Query: 669 APVDIVAMNVVLNGGDPDYVAL-LPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILV 727
           +P++   +N+ +NG D   V+L +PSGF I    +    +   ++ S GSLLTVAFQ+ +
Sbjct: 568 SPLNTQELNMAINGHDLSNVSLIIPSGFLI----SEDSKSLSKDSKSRGSLLTVAFQMHM 623

Query: 728 DSVPTAKLSLGSVATVNNLIACTVERIKASL 758
            +         + A+ N L+   V+ IK +L
Sbjct: 624 PAPLITNFESAADAS-NALMTTVVQSIKHAL 653


>gi|357452777|ref|XP_003596665.1| Homeodomain protein (HB2) [Medicago truncatula]
 gi|355485713|gb|AES66916.1| Homeodomain protein (HB2) [Medicago truncatula]
          Length = 554

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 212/549 (38%), Positives = 299/549 (54%), Gaps = 58/549 (10%)

Query: 258 MYGAADLLRSIS--APTEADKPMIIELAVAAMEELIRMAQM-GEPLWMTSLDGTAAVLNE 314
           M  A+DLL  +S  AP       II+ A +AM EL ++      P+W    +    +L+ 
Sbjct: 1   MQRASDLLSGVSMYAPNNIK---IIDCARSAMNELCKIGLAENNPVWHQHKEHRYEILDN 57

Query: 315 DEYVRTFP---------------------------RGIGPKPT------GFKCEASRETA 341
            EY++ F                            R   P  T      G + E SR+ A
Sbjct: 58  IEYLKQFSQVDASLMELVKMVEVGDLQTLPSFDSCRIQDPMSTKDVFGQGLQIEGSRDMA 117

Query: 342 VVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSP 401
           ++ ++   LVE+LMD+NQW T F  IVSRA  +   + GV G+YN  + VM+AEF +PSP
Sbjct: 118 LIKISPTKLVEVLMDLNQWCTAFHNIVSRAEIIGFFTDGVDGSYNEKMHVMSAEFYLPSP 177

Query: 402 LVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTW 461
            +PTRE  + RY KQ     WAVVDVSL+++ PS +    +RPSGCLI  MPNG SKV W
Sbjct: 178 FIPTRECVFARYSKQFTHNIWAVVDVSLEDILPSFSNNFHKRPSGCLIIGMPNGNSKVIW 237

Query: 462 VEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQ 521
           VEHV  D   ++ L+K  V++G AFGA RW+A++ +  E   ++ AT +   +  V+  Q
Sbjct: 238 VEHVVADHSQLNGLFKTFVTSGLAFGAPRWLASIVQHIEWSETLNATKL-IADARVLIPQ 296

Query: 522 DGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGT--GADDVRVMTRKSVDDPGRPPGIV 579
            GR S+LKLAERM   FCA +S++T + W  L     G++D+RVM   ++       GI 
Sbjct: 297 IGRTSLLKLAERMRRRFCANLSSTTNNPWMRLDPVPAGSEDIRVMIGNNM------AGIA 350

Query: 580 -LSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRV 638
            L   T+ WL V P R+F+FLR E +RS+WD LS    +QE A +  G+   N VSLL  
Sbjct: 351 SLVFCTTLWLNVSPNRLFNFLRHEKSRSKWDKLSENLAIQEFACMLTGKHPENRVSLLSA 410

Query: 639 NCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNG-GDPDYVALLPSGFAI 697
               S +  ++ +  LQES  D TAS+VIYAP+D  A+  +  G  +PD V   PSGFAI
Sbjct: 411 ----STSEDKTEIFYLQESYADITASYVIYAPLDEPALTSLATGSSNPDNVVAYPSGFAI 466

Query: 698 LPDGTSLHG----ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVER 753
           +P G    G     N    A+  SLLT++F I+ ++   A ++  SV T+ N+I  TV  
Sbjct: 467 IPGGLPRDGDKGKGNANSTANNESLLTMSFHIIDNASNVASIAPESVQTIYNIITETVAA 526

Query: 754 IKASLSCES 762
           IK ++S  S
Sbjct: 527 IKDAVSYHS 535


>gi|356528154|ref|XP_003532670.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 793

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 183/508 (36%), Positives = 289/508 (56%), Gaps = 23/508 (4%)

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
           S   + D   ++++A  AMEEL+++  + EP W  SL      L  D Y R F R     
Sbjct: 295 SLSKDMDSVQMLKIAEDAMEELMKLLSLNEPFWFRSLLDGKFNLRHDCYKRIFGRSNCLS 354

Query: 329 PTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGA 388
               + E+S+++ VV M+   LVE+ ++ ++W  +F  IV +A T++VL +G +GN NGA
Sbjct: 355 GPHVRMESSKDSRVVKMSGAQLVEMFLNSDKWVDLFPTIVKKAQTIQVLESGSSGNRNGA 414

Query: 389 LQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAV-RCRRRPSGC 447
           LQ++ AE  + S LVP+RE  ++RYCKQ   G WA+ DVS+D+      V   RR PSGC
Sbjct: 415 LQLVNAEMHILSHLVPSREFLFLRYCKQIEVGIWAIGDVSIDSSTYKTTVSHARRLPSGC 474

Query: 448 LIQEMPN-GYSKVTWVEHVEVDDR-GVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASV 505
           LIQE  + G   V+W+EHVEV+++   HNL++  +   NA+GA RWV TL+R CER AS 
Sbjct: 475 LIQEKSSEGLCMVSWMEHVEVNEKMQTHNLFRDTICGNNAYGADRWVMTLERMCERFASY 534

Query: 506 MATNIPTGEV-GVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVM 564
            A  IP+ E  GV+ + D +++++ L  RMV  FC  +       +  L+    + V++ 
Sbjct: 535 SAKTIPSCETGGVVRSPDVKRNIMHLTHRMVKMFCGNLDMQDNPNFPNLTRMNNNGVKLS 594

Query: 565 TRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIA 624
            R +   P  P G ++ AA  F +P+ P+ VFD L D N R++WD L +G    E+  I+
Sbjct: 595 IRVNHTGPNEPKGTIIGAAICFRVPLSPQIVFDNLIDNNKRAKWDTLCDGSAGHEIQRIS 654

Query: 625 NGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGD 684
            G + GNC+S++R          ++NM+ILQES  D   S +++AP  +  +++++ G D
Sbjct: 655 TGSNPGNCISIMR-----PFIPKENNMVILQESYVDALGSMLVFAPFYMEGLDLIMKGED 709

Query: 685 PDYVALLPSGFAI--------LPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTA-KL 735
                +LPSG  I        +P+G S     +G+  S GSL+T+ FQ+L  S      +
Sbjct: 710 SSLFPILPSGLTISWDYQSNKVPEGQS---GQVGQ--SRGSLVTLMFQLLASSTSKIDNV 764

Query: 736 SLGSVATVNNLIACTVERIKASLSCESA 763
            +  + ++N L+  TVE+IK +L+C ++
Sbjct: 765 DMKLIGSINTLVTSTVEKIKDALNCSNS 792



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 68/95 (71%), Gaps = 3/95 (3%)

Query: 94  YH---RHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           YH   RH + ++  +E  FKEC HP++ +R+++  ELGL+P QVKFWFQNK+T ++T +E
Sbjct: 18  YHWRNRHGRDKVARLEEIFKECTHPNEVRRRQIGEELGLDPEQVKFWFQNKKTHIRTINE 77

Query: 151 RHENTQLRTENEKLRADNMRYREALSNASCPNCGG 185
           R +   LR ENE+++++N + RE L N SC +CGG
Sbjct: 78  RLDTDALRLENERIQSENNKMRETLENLSCGSCGG 112


>gi|26450799|dbj|BAC42508.1| unknown protein [Arabidopsis thaliana]
          Length = 517

 Score =  331 bits (849), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 196/504 (38%), Positives = 294/504 (58%), Gaps = 28/504 (5%)

Query: 273 EADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP-KPTG 331
           E D  ++ E+A +A+EEL R+    E  W+ S      V++ + Y R F   +     T 
Sbjct: 23  ETDMSLLSEIAASAVEELKRLFLAEEQFWVKSCIDETYVIDTESYER-FSHAVKHFSSTT 81

Query: 332 FKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTG--VAGNYNGAL 389
              E+S+   VV +  I+L+++ +D  +W  +F  IV++A T+ VL +G  + GN N  L
Sbjct: 82  AHVESSKAVTVVHVEAINLIQMFLDPEKWKELFPTIVNKANTIHVLGSGLPIRGNCN-VL 140

Query: 390 QVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLI 449
           QVM  +  + SPLVP RE   VR C++  +G W + DVS           C +RPSGCLI
Sbjct: 141 QVMWEQLHILSPLVPAREFMVVRCCQEIEKGIWIIADVSHRANFDFGNAACYKRPSGCLI 200

Query: 450 QEMPNGYSKVTWVEHVEVDDR-GVHNLYKQLVSTGNAFGAKRWVATLDRQCERLA-SVMA 507
           Q +P+ +SKV W+EHVEVD +   H +Y+ L+S G+ +GAKRW+ TL+R CER+A S + 
Sbjct: 201 QALPDAHSKVMWIEHVEVDHKLDTHKIYRDLLSGGSGYGAKRWIVTLERMCERMALSSIQ 260

Query: 508 TNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRK 567
           T  P+    VIT  + R+S++KL ERMV +F   ++ S    +   S  G   VRV  R 
Sbjct: 261 TLPPSDRSEVITTGEARRSVMKLGERMVKNFNEMLTMSGKIDFPQQSKNG---VRVSIRM 317

Query: 568 SVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGR 627
           +++  G+PPGIV+SA++S  +P+ P +VF FL++ +TR +WDILS G VV E+A I  G 
Sbjct: 318 NIE-AGQPPGIVVSASSSLAIPLTPLQVFAFLQNLDTRQQWDILSYGTVVNEIARIVTGS 376

Query: 628 DTGNCVSLLRVNCLQSAN--------SSQSNMLILQESCTDPTASFVIYAPVDIVAMNVV 679
              NCV++LRV+     N        S + +ML+LQ+   D     ++YAP+D+  M+  
Sbjct: 377 SETNCVTILRVHPTHEENNDKMVVQDSCKDDMLMLQDCYMDALGGMIVYAPMDMATMHFA 436

Query: 680 LNGG-DPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVP--TAKLS 736
           ++G  DP ++ +LPSGF I  DG             GG+LLTVAFQILV      + +++
Sbjct: 437 VSGEVDPSHIPILPSGFVISSDGRR------STVEDGGTLLTVAFQILVSGKANRSREVN 490

Query: 737 LGSVATVNNLIACTVERIKASLSC 760
             SV TV+ LI+ T++RIK  L+C
Sbjct: 491 EKSVDTVSALISSTIQRIKGLLNC 514


>gi|147820899|emb|CAN60897.1| hypothetical protein VITISV_008020 [Vitis vinifera]
          Length = 461

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 178/443 (40%), Positives = 263/443 (59%), Gaps = 39/443 (8%)

Query: 78  GASGDDQEQRPNK-KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKF 136
           G+ GD     P + +K Y+RHT  QIQ +EAFFK+CPHPD+ QR++L RELGLE  Q+KF
Sbjct: 9   GSGGDQDGPNPRRGRKVYNRHTPQQIQRLEAFFKDCPHPDEAQRRQLGRELGLESRQIKF 68

Query: 137 WFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDE 196
           WFQNKRTQ KTQHER +NT LR ENE+++ +N+  REAL N  CP+CGGP   GE     
Sbjct: 69  WFQNKRTQTKTQHERADNTALRAENERIQCENLAIREALKNVICPSCGGP-PFGEXERQR 127

Query: 197 H--HLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQ---- 250
           +   L+LENA+L+EE +++S + AKY+GKP+    LL PP     L+ + G+F +Q    
Sbjct: 128 NIEKLQLENAQLKEEHEKVSNLLAKYIGKPITQMHLL-PPALGSSLDFSPGSFPSQETGG 186

Query: 251 ---PGIG---GGEMYGA----ADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPL 300
              P +G   G E+       A ++       + +K ++ E A  AM+ELIR+ ++ EPL
Sbjct: 187 LSIPTVGPALGLELAPVDVCNASVMYQFKGFPDMEKTLMTETAAGAMDELIRLVRINEPL 246

Query: 301 WMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQW 360
           W+ S      VL+ D Y R FP+    K +  + E+S+E+ VV MN + LV + +D N++
Sbjct: 247 WVKSATNEKYVLHHDSYERIFPKATHFKSSNARXESSKESVVVAMNGMQLVNMFLDPNKY 306

Query: 361 STVFSGIVSRAMTLEVLSTGVAGNYNGALQV---------------MTAEFQVPSPLVPT 405
             +F  IV++A T++VL  G+ G+ +G+LQ+               M  +  + SPLV  
Sbjct: 307 VDLFPTIVTKASTIQVLEAGIIGSRSGSLQLFCPGKKFSKSKVLMQMYEQMHILSPLVAP 366

Query: 406 RESYYVRYCKQHGEGTWAVVDVSLDNLRPSP--AVRCRRRPSGCLIQEMPNGYSKVTWVE 463
           RE Y++RYC+Q   G W +VDVS D  +     ++R  + PSGC+IQ++P+G SK   + 
Sbjct: 367 REFYFLRYCQQIELGVWVMVDVSYDYSKDGQPNSLRFWKLPSGCMIQDLPDGCSKNRKIT 426

Query: 464 HVEVDDRGVHNLYKQLVSTGNAF 486
            +E    GV +  K L +  + F
Sbjct: 427 ILEF---GVKSFSKMLWTISSIF 446


>gi|115475738|ref|NP_001061465.1| Os08g0292000 [Oryza sativa Japonica Group]
 gi|38175461|dbj|BAD01388.1| putative OCL3 protein [Oryza sativa Japonica Group]
 gi|113623434|dbj|BAF23379.1| Os08g0292000 [Oryza sativa Japonica Group]
          Length = 786

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 242/743 (32%), Positives = 357/743 (48%), Gaps = 113/743 (15%)

Query: 72  GSENHEGASGDDQ-EQRPN-----KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
           GS N +  +G  Q E R +     K +RY   T  Q + +   F+ CP+PD    K+L++
Sbjct: 37  GSSNQDKRNGLSQGENRMDTCTRKKPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAK 96

Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGG 185
           EL +   Q+K+WFQN RT+MK      E   L+ ENE+L+ +N   R  + N++C  C  
Sbjct: 97  ELNMTETQIKYWFQNCRTKMKKFKNNEERKLLQKENEELKKENAELRNRMKNSTCRACDL 156

Query: 186 PTAIGEMSFDEHHLRLENARLR------------EEIDRISAIAAKYV--GKPVVNYPLL 231
           P        D  H   EN  L             + +  +   ++ +V  G  + +  +L
Sbjct: 157 PL----FHIDCRHW--ENPMLNKGNHGVTSNLIPQAVSSLLPSSSGFVASGSNLSSNAVL 210

Query: 232 SP--PVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTE---ADKPMIIELAVAA 286
            P   +PS  L+ A       P + G        +L ++SA       +K ++++LA  A
Sbjct: 211 MPVSAMPSSVLQPA-------PAVSGANF----PILHNLSANANDGYTEKNVLLDLANRA 259

Query: 287 MEELIRMAQMGE----------PLWMTSLDGTAA-VLNEDEYVRTFPRGIGPKPTGFKCE 335
           MEE   + +  E          PLW+  +D      LN  EY+    R IG KP  FK  
Sbjct: 260 MEEFFSLMKENESLLVKKKENGPLWLPHMDILGVESLNYQEYLAK-SRTIGQKPVDFKVV 318

Query: 336 ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 395
            +R+TA+V  + + LV+ L+D N+W  +F GIV+ A T +++STG +  ++G LQ+M AE
Sbjct: 319 VTRDTAIVNGSCVDLVKSLLDANRWRELFPGIVASANTTKIISTGPSNLHDGLLQLMRAE 378

Query: 396 FQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP-------------SPAVR--- 439
            QV SP VP  +  ++R   Q G G W VVDVS+D + P             S A R   
Sbjct: 379 LQVMSPEVPVCDVTFLRQSVQFGSGLWCVVDVSIDTILPGESKTAQSSVQTSSTAARRME 438

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
            R  PSGC+I+EM NGYSKVTW+ H   D+R V  LY  L+ +  A GA RWVA+L R  
Sbjct: 439 VRLLPSGCVIEEMENGYSKVTWMVHAAYDERAVPVLYHSLLRSAKALGACRWVASLQRHS 498

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD 559
           + L+ +            +T    R+ +L L ++M  SF  G+ AS +    TL     D
Sbjct: 499 QFLSGLHKYIFCPD--STMTEVVMRRKVLYLVKQMTSSF-TGLFASMSK--ATLQ--DGD 551

Query: 560 DVRVMTRKSVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEWDIL------- 611
           D     +      G P G++LSA T+ WLP V P+ V+D LRDE    EW  L       
Sbjct: 552 DTHFAHQIVGGATGEPAGLLLSATTTIWLPGVNPRHVYDHLRDEQCHGEWRCLLGEQLHQ 611

Query: 612 ---------SNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPT 662
                     NG  V E   + NG   G+ +SL+     +    + SN L+LQE+ TD +
Sbjct: 612 GNALPYGAPLNGETVPEFYRMVNGLHEGHAISLISP---REMGGNISNTLLLQEARTDLS 668

Query: 663 ASFVIYAPVDIVAMNVVLNGG-DPDYVALLPSGFAILPD---GTSLHGANIGEAA----- 713
            S ++YA  D+  ++ ++N G +P  V L+ SG AILPD      LH A   + A     
Sbjct: 669 GSLIVYARTDVNTVHSIMNSGLNPATVFLVSSGCAILPDCLESFPLHPAATADQAGTSSA 728

Query: 714 -------SGGSLLTVAFQILVDS 729
                  +GGS +TV +Q+   S
Sbjct: 729 AIASRSETGGSFVTVTYQMFFSS 751


>gi|357452773|ref|XP_003596663.1| Homeodomain protein (HB2) [Medicago truncatula]
 gi|355485711|gb|AES66914.1| Homeodomain protein (HB2) [Medicago truncatula]
          Length = 545

 Score =  318 bits (815), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 186/485 (38%), Positives = 275/485 (56%), Gaps = 27/485 (5%)

Query: 285 AAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVI 344
           A + E++++ ++GE   + S D      N    +  F +G+       + EASR+ A++ 
Sbjct: 65  ATLLEIVKLVEVGELQTLPSFD-LCRNQNSMYTMEVFEQGL-------QIEASRDKALIK 116

Query: 345 MNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVP 404
           ++   LVE+LMDVNQWST F  IVS A  L      + G+Y+  + VM+AEF +PSP++P
Sbjct: 117 ISPTKLVELLMDVNQWSTAFYNIVSGARIL----GSIEGSYDEKMHVMSAEFHLPSPVIP 172

Query: 405 TRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEH 464
           TR+  + RY KQ     WAVVDVSL+++  SP+    +RPSGCLI+ MP+G SKV W+EH
Sbjct: 173 TRKCVFARYSKQFTHNIWAVVDVSLEDILQSPSNNFHKRPSGCLIEGMPDGNSKVIWLEH 232

Query: 465 VEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGR 524
           VE D   + +L++ LV++  AFGA RW+ ++ R  E   ++ A  +   + GV+  Q GR
Sbjct: 233 VEADYSKLSDLFRPLVTSALAFGATRWLTSIVRYIEWSETLKAPKL-IADAGVLIPQIGR 291

Query: 525 KSMLKLAERMVISFCAGVSASTAHTWTTLS--GTGADDVRVMTRKSV-DDPGRPPGIVLS 581
            S LKLA+RM+  FCA + ++T + W  L+    G+ D+RVM    +      P G  L 
Sbjct: 292 TSFLKLADRMMRRFCANLGSTTKNPWIRLAPLPAGSADIRVMIANDMAGSTNEPIGTSLF 351

Query: 582 AATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCL 641
             T+ WL V P R+F+FLR E +RS+WD  S    ++E A I  G+   N VSLLR    
Sbjct: 352 FCTTLWLNVSPNRLFNFLRHEKSRSKWDKHSQNLSIREFACILTGKHPENRVSLLRAR-- 409

Query: 642 QSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG 701
                 ++ +  LQES  D TAS+VIY P+D   +  +  G +PD V   PSGFAI+P G
Sbjct: 410 -----DKNEIFYLQESYKDTTASYVIYCPLDEQKLTHLATGSNPDDVVAFPSGFAIIPGG 464

Query: 702 TSLHG----ANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKAS 757
               G     N    A+  SLLT++F I+  +   A +   SV T+ N++  T+  IK +
Sbjct: 465 LPRDGDKGKGNANSTANDESLLTISFHIIGKANNAASIPPESVQTIYNMVTETMAAIKDA 524

Query: 758 LSCES 762
           +S  S
Sbjct: 525 VSYHS 529


>gi|218200868|gb|EEC83295.1| hypothetical protein OsI_28655 [Oryza sativa Indica Group]
          Length = 790

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 243/747 (32%), Positives = 358/747 (47%), Gaps = 117/747 (15%)

Query: 72  GSENHEGASGDDQ-EQRPN-----KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
           GS N +  +G  Q E R +     K +RY   T  Q + +   F+ CP+PD    K+L++
Sbjct: 37  GSSNQDKRNGLSQGENRMDTCTRKKPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAK 96

Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGG 185
           EL +   Q+K+WFQN RT+MK      E   L+ ENE+L+ +N   R  + N++C  C  
Sbjct: 97  ELNMTETQIKYWFQNCRTKMKKFKNNEERKLLQKENEELKKENAELRNRMKNSTCRACDL 156

Query: 186 PTAIGEMSFDEHHLRLENARLR------------EEIDRISAIAAKYV--GKPVVNYPLL 231
           P        D  H   EN  L             + +  +   ++ +V  G  + +  +L
Sbjct: 157 PL----FHIDCRHW--ENPMLNKGNHGVTSNLIPQAVSSLLPSSSGFVASGSNLSSNAVL 210

Query: 232 SP--PVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTE---ADKPMIIELAVAA 286
            P   +PS  L+ A       P + G        +L ++SA       +K ++++LA  A
Sbjct: 211 MPVSAMPSSVLQPA-------PAVSGANF----PILHNLSANANDGYTEKNVLLDLANRA 259

Query: 287 MEELIRMAQMGE----------PLWMTSLDGTAA-VLNEDEYVRTFPRGIGPKPTGFKCE 335
           MEE   + +  E          PLW+  +D      LN  EY+    R IG KP  FK  
Sbjct: 260 MEEFFSLMKENESLLVKKKENGPLWLPHMDILGVESLNYQEYLAK-SRTIGQKPVDFKVV 318

Query: 336 ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQV---- 391
            +R+TA+V  + + LV+ L+D N+W  +F GIV+ A T +++STG +  ++G LQ+    
Sbjct: 319 VTRDTAIVNGSCVDLVKSLLDANRWRELFPGIVASANTTKIISTGPSNLHDGLLQLKNLQ 378

Query: 392 MTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP-------------SPAV 438
           M AE QV SP VP  +  ++R   Q G G W VVDVS+D + P             S A 
Sbjct: 379 MRAELQVMSPEVPVCDVTFLRQSVQFGSGLWCVVDVSIDTILPGESKTAQSSVQTSSTAA 438

Query: 439 R---CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATL 495
           R    R  PSGC+I+EM NGYSKVTW+ H   D+R V  LY  L+ +  A GA RWVA+L
Sbjct: 439 RRMEVRLLPSGCVIEEMENGYSKVTWMVHAAYDERAVPVLYHSLLRSAKALGACRWVASL 498

Query: 496 DRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSG 555
            R  + L+ +            +T    R+ +L L ++M  SF  G+ AS +    TL  
Sbjct: 499 QRHSQFLSGLHKYIFCPD--STMTEVVMRRKVLYLVKQMTSSF-TGLFASMSK--ATLQ- 552

Query: 556 TGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEWDIL--- 611
              DD     +      G P G++LSA T+ WLP V P+RV+D LRDE    EW  L   
Sbjct: 553 -DGDDTHFAHQIVGGATGEPAGLLLSATTTIWLPGVNPRRVYDHLRDEQCHGEWRCLLGE 611

Query: 612 -------------SNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESC 658
                         NG  V E   + NG   G+ +SL+     +    + SN L+LQE+ 
Sbjct: 612 QLHQGNALPYGAPLNGETVPEFYRMVNGLHEGHAISLISP---REMGGNISNTLLLQEAR 668

Query: 659 TDPTASFVIYAPVDIVAMNVVLNGG-DPDYVALLPSGFAILPD---GTSLHGANIGEAA- 713
           TD + S ++YA  D+  ++ ++N G +P  V L+ SG AILPD      LH A   + A 
Sbjct: 669 TDLSGSLIVYARTDVNTVHSIMNSGLNPATVFLVSSGCAILPDCLESFPLHPAATADQAG 728

Query: 714 -----------SGGSLLTVAFQILVDS 729
                      +GGS +TV +Q+   S
Sbjct: 729 TSSAAIASRSETGGSFVTVTYQMFFSS 755


>gi|345195192|tpg|DAA34961.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414587883|tpg|DAA38454.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 707

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 237/695 (34%), Positives = 343/695 (49%), Gaps = 121/695 (17%)

Query: 73  SENHEGASGDDQEQRP-NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
           +++ E  S    EQ P N+ KR+   T  QIQ++EA F+ C HP+   R+EL+ + GLE 
Sbjct: 53  TDDDEDQSSHVSEQTPSNRTKRF---TMDQIQQLEAQFRVCRHPNLDARQELAAKTGLEE 109

Query: 132 LQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGE 191
            QVK                 EN  +R E  KL+A+N   ++ + N  C  C  PT   +
Sbjct: 110 RQVKACGD-------------ENKGIRQELGKLKAENEELKQRMLNPICFRCRNPTLATQ 156

Query: 192 MSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQP 251
            + ++  L  ENARLR+E  R  A   + + +            PS  L L         
Sbjct: 157 PTSEKRRLLNENARLRDEYVRAKAYLDRLIREGAERRA-----SPSAHLHLG-------- 203

Query: 252 GIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAV 311
                   G+A L               +  A  AMEEL+ +A  GEP+W+ ++DG    
Sbjct: 204 --------GSATL---------------VSHAERAMEELVMLATKGEPMWLPAMDG--ET 238

Query: 312 LNEDEYV-RTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSR 370
           LN  EYV +TFP  +G  P GF  EA+RE+  +    + LV +L D NQW  +F G V+ 
Sbjct: 239 LNHQEYVLQTFPGLLGLCPPGFVEEATRESDTIRGTAMYLVSVLTDANQWCEMFPGTVA- 297

Query: 371 AMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLD 430
                                M AE  V SP +  R   ++R+ K+     WA+ DVS+ 
Sbjct: 298 --------------------YMDAELWVQSPRLLNRSVKFLRFSKKLSNRRWAMADVSVV 337

Query: 431 N----LRPS-PAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNA 485
           +    + P   +  CR  PSGCL+++M  GY KVTWV H E D+  V +L++  + +G A
Sbjct: 338 DGVCGVEPGGSSTGCRLLPSGCLLEDMSGGYCKVTWVVHAEYDETSVPSLFRPFLQSGQA 397

Query: 486 FGAKRWVATLDRQCERLA----SVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAG 541
            GA RW+  L RQCE +     S++  +  +    + T   GR+S+++LA RM  SF A 
Sbjct: 398 LGAYRWLRCLQRQCEYITVLRSSLVLPSSSSSFSAISTLGVGRRSVMELARRMTASFYAA 457

Query: 542 VSA-------STAHTWTTLSGTGADDVRVMTRKSVDD-----PGRPPGIVLSAATSFWLP 589
           VS        S+   W   SG+GA+ V  + R +V +     PG P   VLSA T+ WLP
Sbjct: 458 VSGPVTVPATSSVDEWRVSSGSGAERVEAVVRLAVWNCADIMPGEPAVTVLSATTTVWLP 517

Query: 590 -VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIA-NGRDTGNCVSLLRVNCLQSANSS 647
             PP RV ++L D   R EWD  ++GG VQE+  +A + R  GN VS+L+       + +
Sbjct: 518 GTPPMRVREYLFDLQRRGEWDAHADGGEVQELGSVATSSRLHGNAVSVLQSTSSVDTDGT 577

Query: 648 QSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHG- 706
            S +LILQE+ TD + S V+Y+ V+   M  +++G +   V +LPSGFAILPDG   HG 
Sbjct: 578 DSKVLILQETTTDVSCSLVVYSLVEENLMRGIMDGRERSNVFVLPSGFAILPDG---HGR 634

Query: 707 ANIGEAA-----------------SGGSLLTVAFQ 724
           A+ G+ A                 + GSL+TVAFQ
Sbjct: 635 AHAGDTAATNSSASAAIDDDHSSNAAGSLVTVAFQ 669


>gi|242072358|ref|XP_002446115.1| hypothetical protein SORBIDRAFT_06g001940 [Sorghum bicolor]
 gi|241937298|gb|EES10443.1| hypothetical protein SORBIDRAFT_06g001940 [Sorghum bicolor]
          Length = 775

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 235/710 (33%), Positives = 352/710 (49%), Gaps = 100/710 (14%)

Query: 61  LREEEFD-STKSGSENH---EGASGDDQEQRPN--KKKRYHRHTQHQIQEMEAFFKECPH 114
           L  EE+D     G E+H   + A+G ++    N    KR  R    Q+Q++E+ F+EC H
Sbjct: 20  LDVEEYDMDALMGEEDHLNNDKATGGEEHNINNGSSSKRSKRFNVEQLQQLESSFQECTH 79

Query: 115 PDDKQRKELSRELGLEPLQVKFWFQNKRTQMK---------------------------- 146
           PDD  R+EL+  +G+E  QVKFWFQN+RTQ K                            
Sbjct: 80  PDDAMRRELAARVGIETRQVKFWFQNRRTQTKHSSAAGTAEDGSRALDAAAPALALTLAL 139

Query: 147 ------TQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLR 200
                  +    EN + R +N  L A+NM   + L+   C  C  PTA      ++  L 
Sbjct: 140 AAGAAAVKSYATENNKFRQQNADLLAENMELHKELT---CSRCRDPTA------EKWQLL 190

Query: 201 LENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYG 260
            ENA+L+E   R +A   K +     + P   P V    L L               M  
Sbjct: 191 DENAKLKEMCQRANADLTKLI--QAADRP---PSVTPEDLALVT------------SMNP 233

Query: 261 AADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRT 320
            +  + + S+ T   +  ++  A  A++E   +A+ G PLW+  + G   +LN  EY R 
Sbjct: 234 LSSNVGNSSSSTNNLQVTLLSYAECAIKEFDILARNGPPLWLPIIGGN--MLNIQEYTRL 291

Query: 321 -FPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
            FPR  G  P GF  EA+R+TA+V      L+ IL +V +W   F GIV+       +S+
Sbjct: 292 RFPRLHGICPQGFVVEATRDTALVRGTASDLLGILTNVPRWFETFPGIVAAVRDYHNVSS 351

Query: 380 GVAGNYNGALQVM---TAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP 436
           G+ G+ NG +Q +     +  V SP  P R   ++R   Q   G +AVVDVS++ +    
Sbjct: 352 GIFGSGNGLIQELLQINVDLSVESPCPPLRSMKFLRISMQTANGDFAVVDVSINGVHEQE 411

Query: 437 A------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKR 490
           A        CR  PSGCLIQ+M +G+ +VTW+ H E ++  V  +++Q   +G AFGA R
Sbjct: 412 AGSKNKHTSCRLLPSGCLIQDMGDGHCQVTWIVHAEYNETIVPPIFRQFFGSGQAFGASR 471

Query: 491 WVATLDRQCERLASVMATNIPT-GEVGVIT-NQDGRKSMLKLAERMVISFCAGVSA-STA 547
           W+A+L R CE  A + ++ +PT G +GV+T +  GR ++L LA+RM+  F    SA +T 
Sbjct: 472 WLASLKRHCEYKAVMHSSQVPTGGGLGVVTISALGRWNLLDLAQRMMAIFYKTTSAMATV 531

Query: 548 HTWTTLS------GTGADDVRVMTRKSVDD------PGRPPGI-VLSAATSFWLP-VPPK 593
              T ++      G+  + V    R  + +       G P  I VLSA T+ WLP  PP+
Sbjct: 532 EPGTIVTMFGGRRGSAGEMVEPAVRMVLGNYYLGAMNGEPTFIKVLSATTTVWLPGTPPE 591

Query: 594 RVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDT-GNCVSLLRVNCLQSANSSQSNML 652
            VF++L +   R EWD     G VQE++ IA   D  GN VS+L  N   +AN++    L
Sbjct: 592 HVFNYLCNGQRRGEWDTFVCAGAVQELSSIATCPDLHGNVVSILHPNVTNAANNTA---L 648

Query: 653 ILQESCTDPTASFVIYAPVDIVAMNVVLNGG-DPDYVALLPSGFAILPDG 701
           +LQ+   D + + V+++ V+   ++ ++ GG       LLPSGFAILPDG
Sbjct: 649 LLQQESIDVSCALVVFSLVEKTMIHSIMGGGHSTSSFVLLPSGFAILPDG 698


>gi|222640282|gb|EEE68414.1| hypothetical protein OsJ_26774 [Oryza sativa Japonica Group]
          Length = 922

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 242/747 (32%), Positives = 357/747 (47%), Gaps = 117/747 (15%)

Query: 72  GSENHEGASGDDQ-EQRPN-----KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
           GS N +  +G  Q E R +     K +RY   T  Q + +   F+ CP+PD    K+L++
Sbjct: 169 GSSNQDKRNGLSQGENRMDTCTRKKPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAK 228

Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGG 185
           EL +   Q+K+WFQN RT+MK      E   L+ ENE+L+ +N   R  + N++C  C  
Sbjct: 229 ELNMTETQIKYWFQNCRTKMKKFKNNEERKLLQKENEELKKENAELRNRMKNSTCRACDL 288

Query: 186 PTAIGEMSFDEHHLRLENARLR------------EEIDRISAIAAKYV--GKPVVNYPLL 231
           P        D  H   EN  L             + +  +   ++ +V  G  + +  +L
Sbjct: 289 PL----FHIDCRHW--ENPMLNKGNHGVTSNLIPQAVSSLLPSSSGFVASGSNLSSNAVL 342

Query: 232 SP--PVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTE---ADKPMIIELAVAA 286
            P   +PS  L+ A       P + G        +L ++SA       +K ++++LA  A
Sbjct: 343 MPVSAMPSSVLQPA-------PAVSGANF----PILHNLSANANDGYTEKNVLLDLANRA 391

Query: 287 MEELIRMAQMGE----------PLWMTSLDGTAA-VLNEDEYVRTFPRGIGPKPTGFKCE 335
           MEE   + +  E          PLW+  +D      LN  EY+    R IG KP  FK  
Sbjct: 392 MEEFFSLMKENESLLVKKKENGPLWLPHMDILGVESLNYQEYLAK-SRTIGQKPVDFKVV 450

Query: 336 ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQV---- 391
            +R+TA+V  + + LV+ L+D N+W  +F GIV+ A T +++STG +  ++G LQ+    
Sbjct: 451 VTRDTAIVNGSCVDLVKSLLDANRWRELFPGIVASANTTKIISTGPSNLHDGLLQLKNLQ 510

Query: 392 MTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP-------------SPAV 438
           M AE QV SP VP  +  ++R   Q G G W VVDVS+D + P             S A 
Sbjct: 511 MRAELQVMSPEVPVCDVTFLRQSVQFGSGLWCVVDVSIDTILPGESKTAQSSVQTSSTAA 570

Query: 439 R---CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATL 495
           R    R  PSGC+I+EM NGYSKVTW+ H   D+R V  LY  L+ +  A GA RWVA+L
Sbjct: 571 RRMEVRLLPSGCVIEEMENGYSKVTWMVHAAYDERAVPVLYHSLLRSAKALGACRWVASL 630

Query: 496 DRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSG 555
            R  + L+ +            +T    R+ +L L ++M  SF  G+ AS +    TL  
Sbjct: 631 QRHSQFLSGLHKYIFCPD--STMTEVVMRRKVLYLVKQMTSSF-TGLFASMSK--ATLQ- 684

Query: 556 TGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEWDIL--- 611
              DD     +      G P G++LSA T+ WLP V P+ V+D LRDE    EW  L   
Sbjct: 685 -DGDDTHFAHQIVGGATGEPAGLLLSATTTIWLPGVNPRHVYDHLRDEQCHGEWRCLLGE 743

Query: 612 -------------SNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESC 658
                         NG  V E   + NG   G+ +SL+     +    + SN L+LQE+ 
Sbjct: 744 QLHQGNALPYGAPLNGETVPEFYRMVNGLHEGHAISLISP---REMGGNISNTLLLQEAR 800

Query: 659 TDPTASFVIYAPVDIVAMNVVLNGG-DPDYVALLPSGFAILPD---GTSLHGANIGEAA- 713
           TD + S ++YA  D+  ++ ++N G +P  V L+ SG AILPD      LH A   + A 
Sbjct: 801 TDLSGSLIVYARTDVNTVHSIMNSGLNPATVFLVSSGCAILPDCLESFPLHPAATADQAG 860

Query: 714 -----------SGGSLLTVAFQILVDS 729
                      +GGS +TV +Q+   S
Sbjct: 861 TSSAAIASRSETGGSFVTVTYQMFFSS 887


>gi|345195190|tpg|DAA34960.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414587876|tpg|DAA38447.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 750

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 242/740 (32%), Positives = 368/740 (49%), Gaps = 86/740 (11%)

Query: 41  EGQLHPL--DMTQNTSESEIARLRE-EEFD-STKSGSENHEGASG-----DDQEQRPNKK 91
           EGQL     D+  N  + E+  L + EE+D     G E+           +    + +  
Sbjct: 4   EGQLKNTEPDIGVNMGDDELIYLPDIEEYDMDALMGDEDQLNTDQAIFCEEHNLDKVSSS 63

Query: 92  KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
           KR  R T  Q+Q++E+ F++C HPDD+ R+EL+ ++G+   QVKFWFQN+R+Q+K +   
Sbjct: 64  KRPKRFTVQQLQQLESSFQKCSHPDDEMRQELAAKVGISARQVKFWFQNRRSQIKVRSCG 123

Query: 152 HENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEID 211
            EN + R +N +L A NM  +E L   +C  C  PT +      +  L  ENA+LRE   
Sbjct: 124 TENNKYRRQNAELLATNMELKEQLKGMTCSRCDAPTIM-----QKWQLMDENAKLREMYS 178

Query: 212 RISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAP 271
             SA   K + +   N P   P V    + L               M   +    S  + 
Sbjct: 179 LASAELTKLMQE--ANLP---PSVILEDMALVTS------------MNPLSSNASSSRST 221

Query: 272 TEADKPM-IIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEY-VRTFPRGIGP-K 328
              D+ +  +E A+   E L+R    G PLW+ ++ G   VLN  EY  + FPR  G  +
Sbjct: 222 INQDELLSYVECAIKEFEMLVRD---GTPLWLPTIGGD--VLNSKEYACQRFPRLHGTIR 276

Query: 329 PTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGA 388
           P GF  EA+R+TA+V  +   +V+IL DV +W   F  IV+      V+ +G   + N  
Sbjct: 277 PEGFVVEATRDTAIVKGSAPDIVDILTDVPRWYKAFPCIVAALRAYHVIFSGPFASGNVL 336

Query: 389 LQVM---TAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRR-- 443
           +Q +     +  V SP  P R   ++R  KQ+  G + VVDVS+++++     +  +   
Sbjct: 337 IQELLQINVDLSVESPRPPLRNMKFLRITKQNANGDFVVVDVSINDVQGIHEQQGSQHKH 396

Query: 444 ---PSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCE 500
              PSGCLI++  +GY +VTW+ H E ++  V  L++Q   +G AFGA RW+A+L R CE
Sbjct: 397 TMLPSGCLIKDKGDGYCQVTWIVHAEYEEASVPPLFRQFYQSGLAFGASRWLASLQRHCE 456

Query: 501 RLASVMATNIPTGEV---GVIT-NQDGRKSMLKLAERMVISFCAGVS-------ASTAHT 549
            +    +  +PTG V   GV+T +  GR ++L+LA+RM+  F    S        +    
Sbjct: 457 YMVVKHSIQVPTGCVSGSGVLTLSALGRWNLLELAQRMMAIFYKTTSGLPTVEPGNIVTR 516

Query: 550 W-TTLSGTGADDVRVMTRKSVDD-----PGRP-PGIVLSAATSFWLP-VPPKRVFDFLRD 601
           W     GT  + +    R  + +      G+P P  VLSA T+ WLP  PP+ VF++L +
Sbjct: 517 WGRGCMGTTGEMLEPAVRMVLGNYFGAMDGQPSPLQVLSATTTVWLPGTPPESVFNYLCN 576

Query: 602 ENTRSEWDILSNGGVVQEMAHIANGRDT-GNCVSLLRVNCLQSANSSQSNMLILQESCTD 660
              R EWD     G VQE++ +A      GN VS+L   C    N++ + ML LQ++  D
Sbjct: 577 GQRRGEWDAFVCAGAVQELSSVATCPHLHGNAVSVL---CPNVTNAANNAMLFLQQTSID 633

Query: 661 PTASFVIYAPVDIVAMNVVLN-GGDPDYVALLPSGFAILPDGTSLHG------------A 707
            + + V+Y+ V+   +  VL+   D   + LLPSGFAILPDG   HG            A
Sbjct: 634 VSRALVVYSVVEETMLRSVLDVSDDTSNLVLLPSGFAILPDG---HGRAHHAAASNSSSA 690

Query: 708 NIGEAASGGSLLTVAFQILV 727
             G   + G LLT A+Q+ V
Sbjct: 691 LAGLNGTAGCLLTAAYQVPV 710


>gi|242072556|ref|XP_002446214.1| hypothetical protein SORBIDRAFT_06g004510 [Sorghum bicolor]
 gi|241937397|gb|EES10542.1| hypothetical protein SORBIDRAFT_06g004510 [Sorghum bicolor]
          Length = 735

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 237/760 (31%), Positives = 358/760 (47%), Gaps = 127/760 (16%)

Query: 72  GSENH--EGASGDDQEQRP----NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
           G+E+H     + DD + R        K   R   HQIQE+EA F+ C HP+   R+EL+ 
Sbjct: 22  GAEDHVNTNQTTDDVDHRSPVGETPSKGVKRFAMHQIQELEAQFRVCSHPNPDVRQELAT 81

Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHER-----------------------HENTQLRTENE 162
           ++GLE  QVKFWFQN+R+QMK   +                         +N  +R E  
Sbjct: 82  KIGLEERQVKFWFQNRRSQMKASLDLTTILILLCRLFWLLCLSLVKAYGDDNKGIRQELA 141

Query: 163 KLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVG 222
           KL+A+N   ++   N  C  C  P  I  +  +   L  +N RL++E  R  A   + + 
Sbjct: 142 KLKAENEELKQRRQNPICFMCTNP--IAAIQSENWRLLNDNTRLKDEYVRSKAHMDRLIR 199

Query: 223 KPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIEL 282
           +    +P     + S    LA  +    P    G      +L  ++++            
Sbjct: 200 EAAAEHP--PSAMRSSDHHLASAHMNMDPVALTGNCRTTTNLEATLTSH----------- 246

Query: 283 AVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYV-RTFPRGIGPKPTGFKCEASRETA 341
           A  AM+E + +A  GEP+W+ + DG    LN  EY+ +TFP  +G  P GF  EA+RET 
Sbjct: 247 AARAMKEFVMLATKGEPMWVLAKDGEK--LNHQEYILQTFPGLLGLCPQGFVEEATRETD 304

Query: 342 VVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSP 401
           ++    + LV IL DV                                  M  E  V SP
Sbjct: 305 MIKGTAMDLVSILTDV----------------------------------MNVELWVQSP 330

Query: 402 LVPTRESYYVRYCKQHGEGTWAVVDVSLDNL--------RPSPAVRCRRRPSGCLIQEMP 453
            +  R   ++R+ K    G WAVVDVS+D +          S    CR  PSGCL+++M 
Sbjct: 331 RLLNRSVKFLRFSKMMANGRWAVVDVSVDGIYGVEQEGSSTSYTTGCRLLPSGCLLEDMS 390

Query: 454 NGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCER---LASVMATNI 510
            GY KVTWV H E D+  V  L++ L+ +G A GA RW+ +L +QCE    L S      
Sbjct: 391 GGYCKVTWVVHAEYDETTVPFLFRPLLQSGQALGACRWLRSLQKQCEYITVLPSSHVLPS 450

Query: 511 PTGEVGVITNQDGRKSMLKLAERMVISFCAGVSA-------STAHTWTTLS-GTGADD-- 560
            +    + T   GR+S+++LA +M++SF A VS        S+ + W  +S G G +   
Sbjct: 451 SSSSSAISTLGVGRRSVMELAGQMMVSFYAAVSGPVIVPATSSVNEWRLVSNGNGTERVE 510

Query: 561 --VRVMTRKSVDD-PGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEWDILSNGGV 616
             VR++T    D  PG P   VLSA T+ WLP  PP  VF++L D   R EWD   + G 
Sbjct: 511 AFVRLVTWNCADIMPGEPSVTVLSATTTVWLPGTPPLCVFEYLCDLQRRGEWDTHVDAGE 570

Query: 617 VQEMAHIANGRDT--GNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIV 674
           V+E++ +A        N VS+L    + +  +  S +LILQE+ TD +   V+Y+ ++  
Sbjct: 571 VKELSSVATSPQLPGNNVVSVLEPTTVVTDETESSKVLILQETSTDVSCFLVVYSLIEES 630

Query: 675 AMNVVLNGGDPDYVALLPSGFAILPDGTSLHG--------ANIGEAA-------SGGSLL 719
            M  +++G +   + +LPSGFAILPDG   HG        AN   +A       + GS++
Sbjct: 631 LMRGIMDGRERSNIFVLPSGFAILPDG---HGKAHADHTAANSSNSAPIDSRNNNAGSIV 687

Query: 720 TVAFQILVDSVPTAKL-SLGSVATVNNLIACTVERIKASL 758
           +VAFQ L+    ++ L + G+       +   + +IKA++
Sbjct: 688 SVAFQTLLPGNLSSNLDNTGAFEDARLQVCHAITKIKAAV 727


>gi|317468130|gb|ADV30318.1| GLABRA2 [Mimulus guttatus]
          Length = 382

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 165/405 (40%), Positives = 240/405 (59%), Gaps = 36/405 (8%)

Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNM 169
           KE PHPD+ QR +LS++LGL P QVKFWFQN+RTQ+K   ERHEN+ L+TE +KLR +N 
Sbjct: 1   KESPHPDENQRLQLSKQLGLHPRQVKFWFQNRRTQIKAIQERHENSVLKTEMDKLRDENK 60

Query: 170 RYREALSNASCPNCGGPTAI--GEMSF----DEHHLRLENARLREEIDRISAIAAKYVGK 223
             RE L + SCPNCG  T    G+ S     +E  LR+ENA L+ E++++ +I  K    
Sbjct: 61  VLRETLKSPSCPNCGFATTTSGGKESVTXATEEQRLRIENANLKTEVEKLRSIIGKSPHG 120

Query: 224 PVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELA 283
              N    SPP          GN   Q      E   + D   S       +K  + +  
Sbjct: 121 TSPNTSSCSPP----------GNINDQ------ENRSSFDFNTSNFG---MEKSRVKDTV 161

Query: 284 VAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF-----PRGIGPKPTGFKCEASR 338
            +A+ ELI+MA   EPLW+ S +    +LN DEY + F        + P  +    EASR
Sbjct: 162 NSALNELIKMATHREPLWVPSYETGRVILNYDEYTKEFGNENYSNKMQPNKS---IEASR 218

Query: 339 ETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQV 398
           ++A++ ++ + LV   MD N+W  +F  ++S A T++V+  G   N +GA+ +M AE Q+
Sbjct: 219 DSAIIFVDLLWLVRSFMDANRWQELFPCLISDASTVDVICNGEXENGDGAIYLMFAEIQM 278

Query: 399 PSPLVPTRESYYVRYCKQHGEGTWAVVDVSL--DNLRPSPAVRCRRRPSGCLIQEMPNGY 456
            +P+V TRE Y+ R+CK+     WA+VDVS+  DN+  S + +CR+RPSGC+I++  NG+
Sbjct: 279 LTPMVATREMYFFRHCKKVSANQWAIVDVSIDEDNIDAS-SQKCRKRPSGCIIEDKSNGH 337

Query: 457 SKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCER 501
            KVTWVEH+E     +H+LY+ +V+TG AFGA+  + TL +QCER
Sbjct: 338 CKVTWVEHIECQKIPIHSLYRSIVNTGLAFGARHGICTLQQQCER 382


>gi|414884340|tpg|DAA60354.1| TPA: hypothetical protein ZEAMMB73_058304 [Zea mays]
          Length = 623

 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 199/533 (37%), Positives = 285/533 (53%), Gaps = 64/533 (12%)

Query: 283 AVAAMEELIRMAQMGEPLWM-TSLDGTAAVLNED---EYVRTFPRGIGPKPTGFKCEASR 338
           A AAM++ + +A  GEPLW+ T+ DG A  LN     ++ +  P   G  P  F  EASR
Sbjct: 96  AEAAMDQFLLLATKGEPLWLPTTPDGEA--LNYQLGYKHKKALPVHHGLCPDEFVMEASR 153

Query: 339 ETAVVIMNHISLVEILMDVNQWSTVFSGIVSR--AMTLEVLSTGVAGNYNGALQVMTAEF 396
            T VV  +   LV  L D  +WS +F  +V+   A     +S GV G++   +Q+M AE 
Sbjct: 154 ATGVVRASATYLVATLTDARRWSEMFPSVVASVTARRDAAISGGVFGSH---IQLMNAEL 210

Query: 397 QVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVR----------------- 439
           QV SP +  R   ++RY K+  EG WAV+DVS+D +   P  R                 
Sbjct: 211 QVHSPRLLNRSINFLRYTKRVAEGRWAVMDVSVDGILGPPGSRVADAAAAAAAANGVTLV 270

Query: 440 ------CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVA 493
                 CR  PSGCL+++M NGY KVTWV H E D+  V  +++ L  +G A GA RW+A
Sbjct: 271 PAWYTGCRLLPSGCLVEDMRNGYCKVTWVVHAEYDETTVPTMFRPLFRSGKALGAHRWLA 330

Query: 494 TLDRQCERLASVMATNIPTG--EVGVITNQDGRKSMLKLAERMVISFCAGVS------AS 545
           +L RQCE LA + ++ +  G        +  G++ +L+LA+RMV  F + VS      +S
Sbjct: 331 SLQRQCEFLAVLHSSQVSRGGDNTAAAISSMGKRGVLELAQRMVADFYSAVSGPVTQPSS 390

Query: 546 TAHTWTTLSGTGA----DDVRVMTRKSVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLR 600
           +   W   +G GA      VR++T K     G    +VLSA+T+ WLP  PP+ VF +LR
Sbjct: 391 SIDEWYGSAGAGARRTDTAVRMVTSKKA---GTVADLVLSASTTVWLPNTPPQLVFRYLR 447

Query: 601 DENTRSEWD-ILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCT 659
           D+  R EWD   ++   V E+  +  G   GN VS+L  N     +  ++  LILQE+CT
Sbjct: 448 DDQRRGEWDAFFASSAAVTELCSVPTGHLNGNAVSVLYSNVTDGTDRKKT--LILQEACT 505

Query: 660 DPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG--------TSLHGANIG- 710
           D + S V+YAPV+  +M  V+NGGD   V LLPSGFA+LPDG        +S     +G 
Sbjct: 506 DASCSMVVYAPVEEDSMRAVMNGGDHASVFLLPSGFAVLPDGHGRARHAPSSSSSTPVGC 565

Query: 711 EAASGGSLLTVAFQILV--DSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
           +  + GSLLTVA Q LV   S    + + G+   V  L+   +E+IKA++  +
Sbjct: 566 DDTTAGSLLTVACQALVPGSSPSDNRAAPGAFDDVGKLLCRALEKIKAAVKTD 618


>gi|345195186|tpg|DAA34958.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414880175|tpg|DAA57306.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 701

 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 208/619 (33%), Positives = 310/619 (50%), Gaps = 65/619 (10%)

Query: 13  PSTIGRNGNVGG------LGSSSGLTLSQPTNMMEG-------QLHPLDMTQNTSESEIA 59
           P+ +G  G + G       G   G T SQ +++ E        + H  +  + +     A
Sbjct: 23  PTLMGSLGGIDGPSLMEPFGRVGGGTSSQTSDIPENGSSNQSVEAHANNGKRESPGDGAA 82

Query: 60  RLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQ 119
           R+ E    ++ +  +  +  S   Q+  P  KK  HR T  Q++ +E FF  C HPDD Q
Sbjct: 83  RINEV---NSSTAVKKKKKRSDRQQQDGPQPKKLLHRVTSQQLEILEGFFSICAHPDDSQ 139

Query: 120 RKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRY-REALSN- 177
           RK+LS   GL   QVKFWFQNKRT +K    R EN +L+ ENE L+ +N R  R+A SN 
Sbjct: 140 RKQLSESTGLSVHQVKFWFQNKRTHVKHLSGREENYRLKVENEMLKEENNRLIRQAQSNA 199

Query: 178 -----ASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLS 232
                A CP C           D  HL LE     +E++R+ A+      +  +      
Sbjct: 200 PAPAPAPCPRCIN---------DAGHLLLE-----KEVERLKALNQMLQQELQLQGTEGE 245

Query: 233 PPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIR 292
            PV   P   A G F   P      ++ A           + D  M+ +LA  A +EL+ 
Sbjct: 246 TPVAVDP---ASGAFHPDPEPSLENVFAA-----------QHDGQMLAKLAENAAQELLV 291

Query: 293 MAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVE 352
           +A    PLW+    G+   LN   Y +TFP  +       K EA+R + VV+++  SLVE
Sbjct: 292 LADPESPLWLPVPGGSFETLNMIAYAQTFPGQMSVDAIALKTEATRASGVVMLDPKSLVE 351

Query: 353 ILMDVNQWSTVFSGIVSRAMTLEVLS--TGVAGNYNGALQVMTAEFQVPSPLVPTRESYY 410
            LMD   + T+F G+VS A T +V +  T    +Y+GA+Q+MT E   PSPLV  R+  +
Sbjct: 352 FLMDAESYGTMFPGLVSGAATDKVYNWPTSREESYDGAVQMMTVELAFPSPLVAARKCTF 411

Query: 411 VRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDR 470
           VR CK+  +G +AVVDVSLD+       RCR+ PSG LIQ +     KV+ ++HV VDD 
Sbjct: 412 VRCCKKLEQGAFAVVDVSLDD-----GARCRKMPSGMLIQPIRYNSCKVSAIDHVRVDDT 466

Query: 471 GVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKL 530
            +H+++   +S G  FGA+RWV ++ RQC R+  V      T  V       GRK+++KL
Sbjct: 467 SIHDIFHPCLS-GVLFGARRWVTSMARQCARIRDVFHVTNCTLNV----TSRGRKTIMKL 521

Query: 531 AERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVM-TRKSVDDPGRPPGIVLSAATSFWL 588
           A+ ++  + + V+A     WT   G G + D+++M  R+S          V+ A  SF L
Sbjct: 522 ADNLLADYTSSVAAFPDDAWTVQCGVGTEQDIKIMYKRQSEGSSSSSNTAVVCACASFLL 581

Query: 589 PVPPKRVFDFLRDENTRSE 607
           P+  ++ FD L++   R++
Sbjct: 582 PLRMRKAFDLLKNNLLRAK 600


>gi|317468128|gb|ADV30317.1| GLABRA2 [Mimulus guttatus]
          Length = 298

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 134/304 (44%), Positives = 197/304 (64%), Gaps = 9/304 (2%)

Query: 394 AEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLD--NLRPSPAVRCRRRPSGCLIQE 451
           AE Q+ +P+V TRE Y+ R+CK+     WA+VDVS+D  N+  S   +CR+RPSGC+I++
Sbjct: 2   AEIQMLTPMVATREMYFFRHCKKLNTNQWAIVDVSIDEDNIDASSQ-KCRKRPSGCIIED 60

Query: 452 MPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIP 511
             NG+ KVTW+EH+E     +H+LY+ +V+TG AFGA+ W+ TL +QCERL   +ATN+P
Sbjct: 61  KSNGHCKVTWMEHIECQKIPIHSLYRSIVNTGLAFGARHWICTLQQQCERLVFHVATNVP 120

Query: 512 TGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDD 571
             +   +    GRKS+L L++RM  SFC  +  S   +W  +     DD+RV  R ++++
Sbjct: 121 VKDSSGVDTLAGRKSILTLSQRMSWSFCRAIGGSRRISWKKIVSKTGDDIRVSLRNNLNE 180

Query: 572 PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGN 631
            G P G +LSA +S WLP+    +FDFLRDEN R+EWDI+SNG  V    ++A G+D GN
Sbjct: 181 QGEPLGTILSAVSSIWLPLSHHALFDFLRDENRRNEWDIMSNGSTVHSTVNLAKGQDRGN 240

Query: 632 CVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALL 691
            V+++ +         + ++L+LQ+SCT+   S V+YAPVDI  M  V+ G D   + +L
Sbjct: 241 AVTVMDM------KGEEQSVLVLQDSCTNAYESMVVYAPVDIKGMQSVMTGCDSSKIPVL 294

Query: 692 PSGF 695
           PSGF
Sbjct: 295 PSGF 298


>gi|345195200|tpg|DAA34965.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 611

 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 206/594 (34%), Positives = 293/594 (49%), Gaps = 80/594 (13%)

Query: 92  KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
           KR  RHT  QI+E+ A ++ C HPD   R+ L  ++GLE  QV++WFQN+R+Q + +   
Sbjct: 41  KRQKRHTLEQIRELRAAYQRCDHPDAPTRRALGAKIGLEGRQVQYWFQNQRSQTQAKALA 100

Query: 152 HENTQLRTENEKLRADNMRYREALSNASC---PNCGGPTAIGEMSFDEHHLRLENARLRE 208
             N  ++ EN  L A+N   R A+   SC          A  E+  +   L  ENARLR 
Sbjct: 101 QNNRVVQQENAALMAENASLRHAILTGSCLACGGATTAAAPAELPPESRRLVAENARLRG 160

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           E  R +A+         +N  LLS P P  P   AV    +            AD    +
Sbjct: 161 EYARATAL---------LNQILLSAPAPPGPAAAAVVVSSSS------VARPVADRAARL 205

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWM-TSLDGTAAVLNED---EYVRTFPRG 324
               EA           AM++ + +A  GEPLW+ T+ DG A  LN     ++ +  P  
Sbjct: 206 RGHAEA-----------AMDQFLLLATKGEPLWLPTTPDGEA--LNYQLGYKHKKALPVH 252

Query: 325 IGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSR--AMTLEVLSTGVA 382
            G  P  F  EASR T VV  +   LV  L D  +WS +F  +V+   A     +S GV 
Sbjct: 253 HGLCPDEFVMEASRATGVVRASATYLVATLTDARRWSEMFPSVVASVTARRDAAISGGVF 312

Query: 383 GNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVR--- 439
           G++   +Q+M AE QV SP +  R   ++RY K+  EG WAV+DVS+D +   P  R   
Sbjct: 313 GSH---IQLMNAELQVHSPRLLNRSINFLRYTKRVAEGRWAVMDVSVDGILGPPGSRVAD 369

Query: 440 --------------------CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQL 479
                               CR  PSGCL+++M NGY KVTWV H E D+  V  +++ L
Sbjct: 370 AAAAAAAANGVTLVPAWYTGCRLLPSGCLVEDMRNGYCKVTWVVHAEYDETTVPTMFRPL 429

Query: 480 VSTGNAFGAKRWVATLDRQCERLASVMATNIPTG--EVGVITNQDGRKSMLKLAERMVIS 537
             +G A GA RW+A+L RQCE LA + ++ +  G        +  G++ +L+LA+RMV  
Sbjct: 430 FRSGKALGAHRWLASLQRQCEFLAVLHSSQVSRGGDNTAAAISSMGKRGVLELAQRMVAD 489

Query: 538 FCAGVS------ASTAHTWTTLSGTGA----DDVRVMTRKSVDDPGRPPGIVLSAATSFW 587
           F + VS      +S+   W   +G GA      VR++T K     G    +VLSA+T+ W
Sbjct: 490 FYSAVSGPVTQPSSSIDEWYGSAGAGARRTDTAVRMVTSKKA---GTVADLVLSASTTVW 546

Query: 588 LP-VPPKRVFDFLRDENTRSEWD-ILSNGGVVQEMAHIANGRDTGNCVSLLRVN 639
           LP  PP+ VF +LRD+  R EWD   ++   V E+  +  G   GN VS+L  N
Sbjct: 547 LPNTPPQLVFRYLRDDQRRGEWDAFFASSAAVTELCSVPTGHLNGNAVSVLYSN 600


>gi|328688777|gb|AEB36000.1| ATML1 [Helianthus exilis]
 gi|328688819|gb|AEB36021.1| ATML1 [Helianthus argophyllus]
 gi|328688821|gb|AEB36022.1| ATML1 [Helianthus argophyllus]
          Length = 151

 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 130/151 (86%), Positives = 142/151 (94%)

Query: 457 SKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVG 516
           SKVTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VG
Sbjct: 1   SKVTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVG 60

Query: 517 VITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPP 576
           VIT  +GRKSMLKLAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDPGRPP
Sbjct: 61  VITTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPP 120

Query: 577 GIVLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           GIVLSAATSFW+PV PKRVFDFLRDEN+RSE
Sbjct: 121 GIVLSAATSFWIPVQPKRVFDFLRDENSRSE 151


>gi|328688991|gb|AEB36107.1| ATML1 [Helianthus annuus]
 gi|328688993|gb|AEB36108.1| ATML1 [Helianthus annuus]
 gi|328689055|gb|AEB36139.1| ATML1 [Helianthus annuus]
 gi|328689057|gb|AEB36140.1| ATML1 [Helianthus annuus]
          Length = 151

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 129/151 (85%), Positives = 142/151 (94%)

Query: 457 SKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVG 516
           SKVTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VG
Sbjct: 1   SKVTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVG 60

Query: 517 VITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPP 576
           VIT  +GRKSMLKLAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDPGRPP
Sbjct: 61  VITTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPP 120

Query: 577 GIVLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           GIVLSAATSFW+PV PKRVF+FLRDEN+RSE
Sbjct: 121 GIVLSAATSFWIPVQPKRVFEFLRDENSRSE 151


>gi|328688805|gb|AEB36014.1| ATML1 [Helianthus tuberosus]
 gi|328688807|gb|AEB36015.1| ATML1 [Helianthus tuberosus]
 gi|328688809|gb|AEB36016.1| ATML1 [Helianthus tuberosus]
 gi|328688811|gb|AEB36017.1| ATML1 [Helianthus tuberosus]
          Length = 151

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 129/151 (85%), Positives = 141/151 (93%)

Query: 457 SKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVG 516
           SKVTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP G+VG
Sbjct: 1   SKVTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPAGDVG 60

Query: 517 VITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPP 576
           VIT  +GRKSMLKLAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDPGRPP
Sbjct: 61  VITTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPP 120

Query: 577 GIVLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           GIVLSAATSFW+PV PKRVFDFLR+EN+RSE
Sbjct: 121 GIVLSAATSFWIPVQPKRVFDFLRNENSRSE 151


>gi|328688761|gb|AEB35992.1| ATML1 [Helianthus paradoxus]
 gi|328688763|gb|AEB35993.1| ATML1 [Helianthus paradoxus]
          Length = 151

 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 128/151 (84%), Positives = 142/151 (94%)

Query: 457 SKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVG 516
           SKVTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VG
Sbjct: 1   SKVTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVG 60

Query: 517 VITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPP 576
           VIT  +GRKSMLKLAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDPGRPP
Sbjct: 61  VITTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPP 120

Query: 577 GIVLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           GIVLSAATSFW+PV PKRVFDFLRDE++RS+
Sbjct: 121 GIVLSAATSFWIPVQPKRVFDFLRDESSRSK 151


>gi|328688725|gb|AEB35974.1| ATML1 [Helianthus petiolaris]
 gi|328688727|gb|AEB35975.1| ATML1 [Helianthus petiolaris]
 gi|328688729|gb|AEB35976.1| ATML1 [Helianthus petiolaris]
 gi|328688733|gb|AEB35978.1| ATML1 [Helianthus petiolaris]
 gi|328688737|gb|AEB35980.1| ATML1 [Helianthus petiolaris]
 gi|328688741|gb|AEB35982.1| ATML1 [Helianthus petiolaris]
 gi|328688743|gb|AEB35983.1| ATML1 [Helianthus petiolaris]
 gi|328688769|gb|AEB35996.1| ATML1 [Helianthus exilis]
 gi|328688771|gb|AEB35997.1| ATML1 [Helianthus exilis]
 gi|328688773|gb|AEB35998.1| ATML1 [Helianthus exilis]
 gi|328688775|gb|AEB35999.1| ATML1 [Helianthus exilis]
 gi|328688779|gb|AEB36001.1| ATML1 [Helianthus exilis]
 gi|328688781|gb|AEB36002.1| ATML1 [Helianthus exilis]
 gi|328688783|gb|AEB36003.1| ATML1 [Helianthus exilis]
 gi|328688787|gb|AEB36005.1| ATML1 [Helianthus exilis]
 gi|328688799|gb|AEB36011.1| ATML1 [Helianthus tuberosus]
 gi|328688815|gb|AEB36019.1| ATML1 [Helianthus argophyllus]
 gi|328688817|gb|AEB36020.1| ATML1 [Helianthus argophyllus]
 gi|328688823|gb|AEB36023.1| ATML1 [Helianthus argophyllus]
 gi|328688825|gb|AEB36024.1| ATML1 [Helianthus argophyllus]
 gi|328688827|gb|AEB36025.1| ATML1 [Helianthus argophyllus]
 gi|328688829|gb|AEB36026.1| ATML1 [Helianthus argophyllus]
 gi|328688831|gb|AEB36027.1| ATML1 [Helianthus argophyllus]
 gi|328688833|gb|AEB36028.1| ATML1 [Helianthus argophyllus]
 gi|328688835|gb|AEB36029.1| ATML1 [Helianthus argophyllus]
 gi|328688837|gb|AEB36030.1| ATML1 [Helianthus argophyllus]
          Length = 149

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 128/149 (85%), Positives = 140/149 (93%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VGVI
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T  +GRKSMLKLAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDPGRPPGI
Sbjct: 61  TTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPPGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           VLSAATSFW+PV PKRVFDFLRDEN+RSE
Sbjct: 121 VLSAATSFWIPVQPKRVFDFLRDENSRSE 149


>gi|449526020|ref|XP_004170013.1| PREDICTED: homeobox-leucine zipper protein HDG12-like, partial
           [Cucumis sativus]
          Length = 307

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 150/309 (48%), Positives = 200/309 (64%), Gaps = 13/309 (4%)

Query: 459 VTWVEHVEVDDRG-VHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVG- 516
           VTWVEHVEVDD+   H LY+ LV    A+GA RW+ TL R CERLA       P  E+G 
Sbjct: 1   VTWVEHVEVDDKTQTHRLYRDLVFNTLAYGADRWLFTLQRMCERLAYTFRDCAPNHELGG 60

Query: 517 VITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPP 576
           V+T+ +GR+S++KL+ RMV +FC  +S S    +  LS      VR+  R S  + G+P 
Sbjct: 61  VLTSPEGRRSIMKLSHRMVKNFCGILSMSGKIDFPQLSEVNNSGVRISVRIS-SELGQPS 119

Query: 577 GIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLL 636
           G V+SAATS WLP+ P+ +F+F RDE  R +WD+LS G  V E+AHI  G   GN +S++
Sbjct: 120 GTVVSAATSLWLPLQPETIFNFFRDEKARVQWDVLSYGNPVHEIAHILTGVHPGNLISII 179

Query: 637 RVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFA 696
           R         +++NMLILQESC DP  S VIYAP+D+ AMN+  +G DP  + +LPSGF 
Sbjct: 180 R-----PFVPTENNMLILQESCIDPLGSLVIYAPIDMPAMNIATSGQDPSEIPILPSGFV 234

Query: 697 ILPDGTSLHGANIGEAAS----GGSLLTVAFQILVDSVPTAK-LSLGSVATVNNLIACTV 751
           I  DG +  G     +A+     GSLLT+AFQILV SV ++K L++ SVATVN LI+ TV
Sbjct: 235 ITGDGRTHSGIGASTSATLGRPSGSLLTIAFQILVSSVSSSKQLNVESVATVNTLISATV 294

Query: 752 ERIKASLSC 760
           +RIK +L+C
Sbjct: 295 QRIKVALNC 303


>gi|328688803|gb|AEB36013.1| ATML1 [Helianthus tuberosus]
          Length = 151

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 128/151 (84%), Positives = 140/151 (92%)

Query: 457 SKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVG 516
           SKVTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VG
Sbjct: 1   SKVTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVG 60

Query: 517 VITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPP 576
           VIT  +GRKSMLKLAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDPGRPP
Sbjct: 61  VITTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPP 120

Query: 577 GIVLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           GI LSAATSFW+PV PKRVFDFLRDE +RSE
Sbjct: 121 GIXLSAATSFWIPVQPKRVFDFLRDEXSRSE 151


>gi|328688739|gb|AEB35981.1| ATML1 [Helianthus petiolaris]
          Length = 149

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 127/149 (85%), Positives = 140/149 (93%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VGVI
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T  +GRKSMLKLAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDPGRPPGI
Sbjct: 61  TTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPPGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           VLSAATSFW+PV PKRVFDF+RDEN+RSE
Sbjct: 121 VLSAATSFWIPVQPKRVFDFVRDENSRSE 149


>gi|328688839|gb|AEB36031.1| ATML1 [Helianthus annuus]
 gi|328688841|gb|AEB36032.1| ATML1 [Helianthus annuus]
 gi|328688843|gb|AEB36033.1| ATML1 [Helianthus annuus]
 gi|328688845|gb|AEB36034.1| ATML1 [Helianthus annuus]
 gi|328688847|gb|AEB36035.1| ATML1 [Helianthus annuus]
 gi|328688849|gb|AEB36036.1| ATML1 [Helianthus annuus]
 gi|328688851|gb|AEB36037.1| ATML1 [Helianthus annuus]
 gi|328688853|gb|AEB36038.1| ATML1 [Helianthus annuus]
 gi|328688855|gb|AEB36039.1| ATML1 [Helianthus annuus]
 gi|328688857|gb|AEB36040.1| ATML1 [Helianthus annuus]
 gi|328688859|gb|AEB36041.1| ATML1 [Helianthus annuus]
 gi|328688861|gb|AEB36042.1| ATML1 [Helianthus annuus]
 gi|328688863|gb|AEB36043.1| ATML1 [Helianthus annuus]
 gi|328688865|gb|AEB36044.1| ATML1 [Helianthus annuus]
 gi|328688867|gb|AEB36045.1| ATML1 [Helianthus annuus]
 gi|328688869|gb|AEB36046.1| ATML1 [Helianthus annuus]
 gi|328688871|gb|AEB36047.1| ATML1 [Helianthus annuus]
 gi|328688873|gb|AEB36048.1| ATML1 [Helianthus annuus]
 gi|328688875|gb|AEB36049.1| ATML1 [Helianthus annuus]
 gi|328688877|gb|AEB36050.1| ATML1 [Helianthus annuus]
 gi|328688879|gb|AEB36051.1| ATML1 [Helianthus annuus]
 gi|328688881|gb|AEB36052.1| ATML1 [Helianthus annuus]
 gi|328688883|gb|AEB36053.1| ATML1 [Helianthus annuus]
 gi|328688885|gb|AEB36054.1| ATML1 [Helianthus annuus]
 gi|328688887|gb|AEB36055.1| ATML1 [Helianthus annuus]
 gi|328688889|gb|AEB36056.1| ATML1 [Helianthus annuus]
 gi|328688895|gb|AEB36059.1| ATML1 [Helianthus annuus]
 gi|328688897|gb|AEB36060.1| ATML1 [Helianthus annuus]
 gi|328688903|gb|AEB36063.1| ATML1 [Helianthus annuus]
 gi|328688905|gb|AEB36064.1| ATML1 [Helianthus annuus]
 gi|328688909|gb|AEB36066.1| ATML1 [Helianthus annuus]
 gi|328688911|gb|AEB36067.1| ATML1 [Helianthus annuus]
 gi|328688913|gb|AEB36068.1| ATML1 [Helianthus annuus]
 gi|328688915|gb|AEB36069.1| ATML1 [Helianthus annuus]
 gi|328688917|gb|AEB36070.1| ATML1 [Helianthus annuus]
 gi|328688919|gb|AEB36071.1| ATML1 [Helianthus annuus]
 gi|328688921|gb|AEB36072.1| ATML1 [Helianthus annuus]
 gi|328688923|gb|AEB36073.1| ATML1 [Helianthus annuus]
 gi|328688925|gb|AEB36074.1| ATML1 [Helianthus annuus]
 gi|328688927|gb|AEB36075.1| ATML1 [Helianthus annuus]
 gi|328688929|gb|AEB36076.1| ATML1 [Helianthus annuus]
 gi|328688931|gb|AEB36077.1| ATML1 [Helianthus annuus]
 gi|328688933|gb|AEB36078.1| ATML1 [Helianthus annuus]
 gi|328688935|gb|AEB36079.1| ATML1 [Helianthus annuus]
 gi|328688937|gb|AEB36080.1| ATML1 [Helianthus annuus]
 gi|328688939|gb|AEB36081.1| ATML1 [Helianthus annuus]
 gi|328688941|gb|AEB36082.1| ATML1 [Helianthus annuus]
 gi|328688943|gb|AEB36083.1| ATML1 [Helianthus annuus]
 gi|328688945|gb|AEB36084.1| ATML1 [Helianthus annuus]
 gi|328688947|gb|AEB36085.1| ATML1 [Helianthus annuus]
 gi|328688949|gb|AEB36086.1| ATML1 [Helianthus annuus]
 gi|328688951|gb|AEB36087.1| ATML1 [Helianthus annuus]
 gi|328688953|gb|AEB36088.1| ATML1 [Helianthus annuus]
 gi|328688955|gb|AEB36089.1| ATML1 [Helianthus annuus]
 gi|328688957|gb|AEB36090.1| ATML1 [Helianthus annuus]
 gi|328688959|gb|AEB36091.1| ATML1 [Helianthus annuus]
 gi|328688961|gb|AEB36092.1| ATML1 [Helianthus annuus]
 gi|328688963|gb|AEB36093.1| ATML1 [Helianthus annuus]
 gi|328688965|gb|AEB36094.1| ATML1 [Helianthus annuus]
 gi|328688967|gb|AEB36095.1| ATML1 [Helianthus annuus]
 gi|328688969|gb|AEB36096.1| ATML1 [Helianthus annuus]
 gi|328688971|gb|AEB36097.1| ATML1 [Helianthus annuus]
 gi|328688973|gb|AEB36098.1| ATML1 [Helianthus annuus]
 gi|328688975|gb|AEB36099.1| ATML1 [Helianthus annuus]
 gi|328688977|gb|AEB36100.1| ATML1 [Helianthus annuus]
 gi|328688979|gb|AEB36101.1| ATML1 [Helianthus annuus]
 gi|328688981|gb|AEB36102.1| ATML1 [Helianthus annuus]
 gi|328688983|gb|AEB36103.1| ATML1 [Helianthus annuus]
 gi|328688985|gb|AEB36104.1| ATML1 [Helianthus annuus]
 gi|328688987|gb|AEB36105.1| ATML1 [Helianthus annuus]
 gi|328688989|gb|AEB36106.1| ATML1 [Helianthus annuus]
 gi|328688995|gb|AEB36109.1| ATML1 [Helianthus annuus]
 gi|328688997|gb|AEB36110.1| ATML1 [Helianthus annuus]
 gi|328688999|gb|AEB36111.1| ATML1 [Helianthus annuus]
 gi|328689007|gb|AEB36115.1| ATML1 [Helianthus annuus]
 gi|328689009|gb|AEB36116.1| ATML1 [Helianthus annuus]
 gi|328689011|gb|AEB36117.1| ATML1 [Helianthus annuus]
 gi|328689013|gb|AEB36118.1| ATML1 [Helianthus annuus]
 gi|328689015|gb|AEB36119.1| ATML1 [Helianthus annuus]
 gi|328689017|gb|AEB36120.1| ATML1 [Helianthus annuus]
 gi|328689019|gb|AEB36121.1| ATML1 [Helianthus annuus]
 gi|328689021|gb|AEB36122.1| ATML1 [Helianthus annuus]
 gi|328689027|gb|AEB36125.1| ATML1 [Helianthus annuus]
 gi|328689029|gb|AEB36126.1| ATML1 [Helianthus annuus]
 gi|328689031|gb|AEB36127.1| ATML1 [Helianthus annuus]
 gi|328689033|gb|AEB36128.1| ATML1 [Helianthus annuus]
 gi|328689035|gb|AEB36129.1| ATML1 [Helianthus annuus]
 gi|328689037|gb|AEB36130.1| ATML1 [Helianthus annuus]
 gi|328689039|gb|AEB36131.1| ATML1 [Helianthus annuus]
 gi|328689041|gb|AEB36132.1| ATML1 [Helianthus annuus]
 gi|328689043|gb|AEB36133.1| ATML1 [Helianthus annuus]
 gi|328689045|gb|AEB36134.1| ATML1 [Helianthus annuus]
 gi|328689047|gb|AEB36135.1| ATML1 [Helianthus annuus]
 gi|328689049|gb|AEB36136.1| ATML1 [Helianthus annuus]
 gi|328689051|gb|AEB36137.1| ATML1 [Helianthus annuus]
 gi|328689053|gb|AEB36138.1| ATML1 [Helianthus annuus]
 gi|328689059|gb|AEB36141.1| ATML1 [Helianthus annuus]
 gi|328689061|gb|AEB36142.1| ATML1 [Helianthus annuus]
 gi|328689063|gb|AEB36143.1| ATML1 [Helianthus annuus]
 gi|328689065|gb|AEB36144.1| ATML1 [Helianthus annuus]
 gi|328689067|gb|AEB36145.1| ATML1 [Helianthus annuus]
 gi|328689069|gb|AEB36146.1| ATML1 [Helianthus annuus]
          Length = 149

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 127/149 (85%), Positives = 140/149 (93%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VGVI
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T  +GRKSMLKLAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDPGRPPGI
Sbjct: 61  TTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPPGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           VLSAATSFW+PV PKRVF+FLRDEN+RSE
Sbjct: 121 VLSAATSFWIPVQPKRVFEFLRDENSRSE 149


>gi|328688813|gb|AEB36018.1| ATML1 [Helianthus tuberosus]
          Length = 151

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 128/151 (84%), Positives = 140/151 (92%)

Query: 457 SKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVG 516
           SKVTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASV A NIP+G+VG
Sbjct: 1   SKVTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVXANNIPSGDVG 60

Query: 517 VITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPP 576
           VIT  +GRKSMLKLAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDPGRPP
Sbjct: 61  VITTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPP 120

Query: 577 GIVLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           GIVLSAATSFW+PV PKRVF FLRDEN+RSE
Sbjct: 121 GIVLSAATSFWIPVQPKRVFXFLRDENSRSE 151


>gi|328688793|gb|AEB36008.1| ATML1 [Helianthus tuberosus]
          Length = 149

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 127/149 (85%), Positives = 140/149 (93%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VGVI
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T  +GRKSMLKLAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDPGRPPGI
Sbjct: 61  TTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPPGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           VLSAATSFW+PV PKRVFDFLRDE++RSE
Sbjct: 121 VLSAATSFWIPVQPKRVFDFLRDESSRSE 149


>gi|328688785|gb|AEB36004.1| ATML1 [Helianthus exilis]
          Length = 149

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 127/149 (85%), Positives = 139/149 (93%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVE DDR VHN+YK LV++G  FGAKRWVATLDRQCERLASVMA NIP+G+VGVI
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLVFGAKRWVATLDRQCERLASVMANNIPSGDVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T  +GRKSMLKLAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDPGRPPGI
Sbjct: 61  TTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPPGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           VLSAATSFW+PV PKRVFDFLRDEN+RSE
Sbjct: 121 VLSAATSFWIPVQPKRVFDFLRDENSRSE 149


>gi|328688735|gb|AEB35979.1| ATML1 [Helianthus petiolaris]
          Length = 149

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 127/149 (85%), Positives = 139/149 (93%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VGVI
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T  +GRKSML LAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDPGRPPGI
Sbjct: 61  TTPEGRKSMLNLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPPGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           VLSAATSFW+PV PKRVFDFLRDEN+RSE
Sbjct: 121 VLSAATSFWIPVQPKRVFDFLRDENSRSE 149


>gi|328688791|gb|AEB36007.1| ATML1 [Helianthus tuberosus]
 gi|328688797|gb|AEB36010.1| ATML1 [Helianthus tuberosus]
 gi|328688801|gb|AEB36012.1| ATML1 [Helianthus tuberosus]
          Length = 149

 Score =  272 bits (695), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 127/149 (85%), Positives = 139/149 (93%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP G+VGVI
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPAGDVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T  +GRKSMLKLAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDPGRPPGI
Sbjct: 61  TTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPPGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           VLSAATSFW+PV PKRVFDFLR+EN+RSE
Sbjct: 121 VLSAATSFWIPVQPKRVFDFLRNENSRSE 149


>gi|328688789|gb|AEB36006.1| ATML1 [Helianthus exilis]
          Length = 149

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 127/149 (85%), Positives = 139/149 (93%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VGVI
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T  +GRKSMLKLAERMV+SFC+GV ASTA TWTTLSG+GADDVRVMTRKS+DDPGRPPGI
Sbjct: 61  TTPEGRKSMLKLAERMVLSFCSGVGASTARTWTTLSGSGADDVRVMTRKSMDDPGRPPGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           VLSAATSFW+PV PKRVFDFLRDEN+RSE
Sbjct: 121 VLSAATSFWIPVQPKRVFDFLRDENSRSE 149


>gi|328688753|gb|AEB35988.1| ATML1 [Helianthus paradoxus]
 gi|328688757|gb|AEB35990.1| ATML1 [Helianthus paradoxus]
 gi|328688759|gb|AEB35991.1| ATML1 [Helianthus paradoxus]
 gi|328688765|gb|AEB35994.1| ATML1 [Helianthus paradoxus]
          Length = 149

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 126/149 (84%), Positives = 140/149 (93%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VGVI
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T  +GRKSMLKLAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDPGRPPGI
Sbjct: 61  TTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPPGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           VLSAATSFW+PV PKRVFDFLRDE++RS+
Sbjct: 121 VLSAATSFWIPVQPKRVFDFLRDESSRSK 149


>gi|328688721|gb|AEB35972.1| ATML1 [Helianthus petiolaris]
          Length = 149

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 127/149 (85%), Positives = 139/149 (93%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VGVI
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T  +GRKSMLKLAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDP RPPGI
Sbjct: 61  TTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPRRPPGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           VLSAATSFW+PV PKRVFDFLRDEN+RSE
Sbjct: 121 VLSAATSFWIPVQPKRVFDFLRDENSRSE 149


>gi|328688723|gb|AEB35973.1| ATML1 [Helianthus petiolaris]
          Length = 149

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 127/149 (85%), Positives = 139/149 (93%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VGVI
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T  +GRKSMLKLAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDPGRPPGI
Sbjct: 61  TTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPPGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           VLSAATSFW+PV  KRVFDFLRDEN+RSE
Sbjct: 121 VLSAATSFWIPVQLKRVFDFLRDENSRSE 149


>gi|328689001|gb|AEB36112.1| ATML1 [Helianthus annuus]
          Length = 149

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 126/149 (84%), Positives = 139/149 (93%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VGVI
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T  +GRKSMLKL ERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDPGRPPGI
Sbjct: 61  TTPEGRKSMLKLVERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPPGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           VLSAATSFW+PV PKRVF+FLRDEN+RSE
Sbjct: 121 VLSAATSFWIPVQPKRVFEFLRDENSRSE 149


>gi|328688795|gb|AEB36009.1| ATML1 [Helianthus tuberosus]
          Length = 149

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 126/149 (84%), Positives = 139/149 (93%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VGVI
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T  +GRKSMLKLAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTR S+DDPGRPPGI
Sbjct: 61  TTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRTSMDDPGRPPGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           VLSAATSFW+PV PKRVFDFLRDE++RSE
Sbjct: 121 VLSAATSFWIPVQPKRVFDFLRDEHSRSE 149


>gi|328688891|gb|AEB36057.1| ATML1 [Helianthus annuus]
 gi|328688893|gb|AEB36058.1| ATML1 [Helianthus annuus]
 gi|328688899|gb|AEB36061.1| ATML1 [Helianthus annuus]
 gi|328688901|gb|AEB36062.1| ATML1 [Helianthus annuus]
 gi|328689003|gb|AEB36113.1| ATML1 [Helianthus annuus]
 gi|328689005|gb|AEB36114.1| ATML1 [Helianthus annuus]
 gi|328689023|gb|AEB36123.1| ATML1 [Helianthus annuus]
 gi|328689025|gb|AEB36124.1| ATML1 [Helianthus annuus]
          Length = 149

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 126/149 (84%), Positives = 139/149 (93%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VGVI
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T  +GRKSMLKLAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDPGRPPGI
Sbjct: 61  TTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPPGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           VLSAATSFW+PV PKRVF+FLR EN+RSE
Sbjct: 121 VLSAATSFWIPVQPKRVFEFLRAENSRSE 149


>gi|328688749|gb|AEB35986.1| ATML1 [Helianthus paradoxus]
 gi|328688751|gb|AEB35987.1| ATML1 [Helianthus paradoxus]
 gi|328688755|gb|AEB35989.1| ATML1 [Helianthus paradoxus]
 gi|328688767|gb|AEB35995.1| ATML1 [Helianthus paradoxus]
          Length = 149

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 125/149 (83%), Positives = 139/149 (93%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VGVI
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T  +GRKSMLKLAERMV+SFC+GV ASTAHTWT LSG+GADDVRVMTRKS+DDPGRPPGI
Sbjct: 61  TTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTNLSGSGADDVRVMTRKSMDDPGRPPGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           VLSAATSFW+PV PKRVFDFLRDE++RS+
Sbjct: 121 VLSAATSFWIPVQPKRVFDFLRDESSRSK 149


>gi|328688731|gb|AEB35977.1| ATML1 [Helianthus petiolaris]
          Length = 149

 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 127/149 (85%), Positives = 138/149 (92%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G VGVI
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGGVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T  +GRKSMLKLAERMV+SFC+GV ASTAHTWTTLSG+GADDVRVMTRKS+DDPGRPPGI
Sbjct: 61  TTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPPGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           VLSAATSFW+PV PKRVFDFL DEN+RSE
Sbjct: 121 VLSAATSFWIPVQPKRVFDFLCDENSRSE 149


>gi|328688745|gb|AEB35984.1| ATML1 [Helianthus paradoxus]
          Length = 149

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 125/149 (83%), Positives = 139/149 (93%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VGVI
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T  +GRKSMLKLAERMV+SFC+GV ASTAHTWT LSG+GADDVRVMTRKS+DDPGRPPGI
Sbjct: 61  TTPEGRKSMLKLAERMVLSFCSGVGASTAHTWTDLSGSGADDVRVMTRKSMDDPGRPPGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           VLSAATSFW+PV PKRVFDFLRDE++RS+
Sbjct: 121 VLSAATSFWIPVQPKRVFDFLRDESSRSK 149


>gi|115474701|ref|NP_001060947.1| Os08g0136100 [Oryza sativa Japonica Group]
 gi|31339107|dbj|BAC77160.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
 gi|113622916|dbj|BAF22861.1| Os08g0136100, partial [Oryza sativa Japonica Group]
          Length = 130

 Score =  267 bits (682), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 120/130 (92%), Positives = 126/130 (96%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +KKRYHRHTQHQIQE+EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH
Sbjct: 1   RKKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 60

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREE 209
           ERHEN  LR ENEKLRA+NMRY+EAL+NASCPNCGGP AIGEMSFDEHHLRLENARLR+E
Sbjct: 61  ERHENNALRAENEKLRAENMRYKEALANASCPNCGGPAAIGEMSFDEHHLRLENARLRDE 120

Query: 210 IDRISAIAAK 219
           IDRISAIAAK
Sbjct: 121 IDRISAIAAK 130


>gi|328688907|gb|AEB36065.1| ATML1 [Helianthus annuus]
          Length = 149

 Score =  265 bits (677), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 124/149 (83%), Positives = 137/149 (91%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VTWVEHVE DDR VHN+YK LV++G AFGAKRWVATLDRQCERLASVMA NIP+G+VGVI
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGDVGVI 60

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 578
           T  +GRKSMLKLAERMV+SFC+GV AST HTWTTLSG+GADDVRVMTRKS+DDPGRPPGI
Sbjct: 61  TTPEGRKSMLKLAERMVLSFCSGVGASTTHTWTTLSGSGADDVRVMTRKSMDDPGRPPGI 120

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSE 607
           VLSAATSFW+PV PKRVF+FLR  N+RSE
Sbjct: 121 VLSAATSFWIPVQPKRVFEFLRAGNSRSE 149


>gi|147766576|emb|CAN76225.1| hypothetical protein VITISV_017234 [Vitis vinifera]
          Length = 257

 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 125/261 (47%), Positives = 177/261 (67%), Gaps = 11/261 (4%)

Query: 506 MATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMT 565
           MATN+PT +   +    GRKS+LKLA+RM  SFC  + AS+ ++WT +S    DD+RV +
Sbjct: 1   MATNVPTKDSSGVATLAGRKSILKLAQRMTWSFCRALGASSFNSWTKVSSKTGDDIRVAS 60

Query: 566 RKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIAN 625
           RK+++DPG P G++L A +S WLPV P  +FDFLRDE  RSEWDI+ +GG VQ +A++A 
Sbjct: 61  RKNLNDPGEPQGVILCAVSSVWLPVAPHVIFDFLRDEARRSEWDIMLSGGPVQSIANLAK 120

Query: 626 GRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDP 685
           G+D GN V+      +Q+  S   +M ++Q++CT+   S V+YAPVDI  M  V+ G D 
Sbjct: 121 GQDRGNAVT------IQTMKSKDDSMWVVQDTCTNAYESMVVYAPVDIAGMQSVMTGCDS 174

Query: 686 DYVALLPSGFAILPDGTSLHGANIG-----EAASGGSLLTVAFQILVDSVPTAKLSLGSV 740
             +A+LPSGF+ILPDG       I      ++  GGSLLT+AFQ+L ++ PTAKL++ SV
Sbjct: 175 SSIAILPSGFSILPDGVESRPLVITSRPEEKSTEGGSLLTIAFQVLTNTSPTAKLTMESV 234

Query: 741 ATVNNLIACTVERIKASLSCE 761
            +VN L++CT++ IK SL CE
Sbjct: 235 ESVNTLVSCTLQNIKTSLQCE 255


>gi|449534134|ref|XP_004174022.1| PREDICTED: homeobox-leucine zipper protein ROC2-like, partial
           [Cucumis sativus]
          Length = 169

 Score =  249 bits (636), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 115/164 (70%), Positives = 138/164 (84%), Gaps = 2/164 (1%)

Query: 47  LDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEME 106
            D T +    E+  +RE++FD+ KSG+E  E A G DQ+Q+ +KKKRY+RHTQHQIQEME
Sbjct: 7   FDTTHHHMLEELENMREDDFDN-KSGAEILESACGTDQQQQRSKKKRYNRHTQHQIQEME 65

Query: 107 AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRA 166
           AFFKECPHPDDKQR ELSRELGLEPLQVKFWFQNKRTQMK QHERHEN  L+ ENEKLRA
Sbjct: 66  AFFKECPHPDDKQRMELSRELGLEPLQVKFWFQNKRTQMKAQHERHENAILKAENEKLRA 125

Query: 167 DNMRYREALSNASCPNCG-GPTAIGEMSFDEHHLRLENARLREE 209
           +N+RYREA ++++CPNCG   TA+GEMSFD+ HLR+EN+RLR+E
Sbjct: 126 ENIRYREAFAHSTCPNCGSSSTALGEMSFDDQHLRIENSRLRDE 169


>gi|293332723|ref|NP_001170002.1| uncharacterized protein LOC100383907 [Zea mays]
 gi|224032821|gb|ACN35486.1| unknown [Zea mays]
          Length = 418

 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 158/418 (37%), Positives = 225/418 (53%), Gaps = 53/418 (12%)

Query: 392 MTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVR------------ 439
           M AE QV SP +  R   ++RY K+  EG WAV+DVS+D +   P  R            
Sbjct: 1   MNAELQVHSPRLLNRSINFLRYTKRVAEGRWAVMDVSVDGILGPPGSRVADAAAAAAAAN 60

Query: 440 -----------CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGA 488
                      CR  PSGCL+++M NGY KVTWV H E D+  V  +++ L  +G A GA
Sbjct: 61  GVTLVPAWYTGCRLLPSGCLVEDMRNGYCKVTWVVHAEYDETTVPTMFRPLFRSGKALGA 120

Query: 489 KRWVATLDRQCERLASVMATNIPTG--EVGVITNQDGRKSMLKLAERMVISFCAGVS--- 543
            RW+A+L RQCE LA + ++ +  G        +  G++ +L+LA+RMV  F + VS   
Sbjct: 121 HRWLASLQRQCEFLAVLHSSQVSRGGDNTAAAISSMGKRGVLELAQRMVADFYSAVSGPV 180

Query: 544 ---ASTAHTWTTLSGTGA----DDVRVMTRKSVDDPGRPPGIVLSAATSFWLP-VPPKRV 595
              +S+   W   +G GA      VR++T K     G    +VLSA+T+ WLP  PP+ V
Sbjct: 181 TQPSSSIDEWYGSAGAGARRTDTAVRMVTSKKA---GTVADLVLSASTTVWLPNTPPQLV 237

Query: 596 FDFLRDENTRSEWD-ILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLIL 654
           F +LRD+  R EWD   ++   V E+  +  G   GN VS+L  N     +  ++  LIL
Sbjct: 238 FRYLRDDQRRGEWDAFFASSAAVTELCSVPTGHLNGNAVSVLYSNVTDGTDRKKT--LIL 295

Query: 655 QESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG--------TSLHG 706
           QE+CTD + S V+YAPV+  +M  V+NGGD   V LLPSGFA+LPDG        +S   
Sbjct: 296 QEACTDASCSMVVYAPVEEDSMRAVMNGGDHASVFLLPSGFAVLPDGHGRARHAPSSSSS 355

Query: 707 ANIG-EAASGGSLLTVAFQILV--DSVPTAKLSLGSVATVNNLIACTVERIKASLSCE 761
             +G +  + GSLLTVA Q LV   S    + + G+   V  L+   +E+IKA++  +
Sbjct: 356 TPVGCDDTTAGSLLTVACQALVPGSSPSDNRAAPGAFDDVGKLLCRALEKIKAAVKTD 413


>gi|357503647|ref|XP_003622112.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355497127|gb|AES78330.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 396

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 141/351 (40%), Positives = 193/351 (54%), Gaps = 56/351 (15%)

Query: 109 FKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
           FK C +PD+KQR +L REL ++P ++KFWFQN+RTQ+KTQ+ER +N  L  EN+K+R+ N
Sbjct: 91  FKTCSYPDEKQRLQLGRELAMDPTKIKFWFQNRRTQLKTQNERDDNCTLIQENDKIRSQN 150

Query: 169 MRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNY 228
              REAL N  C  C G             LR+ENARL+EE+ R+S+IAA Y G      
Sbjct: 151 KAMREALQNVICSTCDG-----------QKLRIENARLKEELVRVSSIAAGYTGSSST-- 197

Query: 229 PLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAME 288
               P VP +P  L+                               +K ++ ++A  AM+
Sbjct: 198 ---LPNVPYQPAGLS-----------------------------HKEKSLMFDIATNAMQ 225

Query: 289 ELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP-KPTGFKCEASRETAVVIMNH 347
           ELI + +  EPLWM S +     LN + Y   FPR     K    + EASR++  VIMN 
Sbjct: 226 ELIFLMETNEPLWMKSNNNGRDTLNLETYETMFPRTNNQLKNPNIRIEASRKSGDVIMNA 285

Query: 348 ISLVEILMD------VNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSP 401
           ++LVE+ MD       ++W  +F  IV+ A T+EV+S+      +G+LQ+M  E QV SP
Sbjct: 286 LTLVEMFMDPIDFVEQHKWMELFPTIVTIAKTIEVISSRTKDGLDGSLQLMYEELQVLSP 345

Query: 402 LVPTRESYYVRYCKQHGEGTWAVVDVSLD---NLRPSPAVRCRRRPSGCLI 449
           LVP RE Y++RYCKQ  EG WA+VDVS +   N   +   R  R PSGC I
Sbjct: 346 LVPIREFYFLRYCKQFEEG-WAIVDVSYEFPHNKHFASKFRGHRLPSGCFI 395


>gi|224032921|gb|ACN35536.1| unknown [Zea mays]
          Length = 266

 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 139/262 (53%), Positives = 177/262 (67%), Gaps = 33/262 (12%)

Query: 527 MLKLAERMVISFCAGVSASTAHTWTTLS-------------------GTGADDVRVMTRK 567
           MLKLA+RM  +FCAGV AS A  W  L                    G G + VR+M R 
Sbjct: 1   MLKLAQRMTDNFCAGVCASAAQKWRRLDEWRSGEGGDAAGNGGSAAAGEGEEKVRMMARH 60

Query: 568 SVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANG 626
           SV  PG PPG+VLSA TS  LP   P+RVFD+LRDE  R EWDIL+NG  +QEM HIA G
Sbjct: 61  SVGAPGDPPGVVLSATTSVRLPATSPQRVFDYLRDEQRRGEWDILANGEAMQEMDHIAKG 120

Query: 627 RDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPD 686
           +  GN VSLLR N   + + +Q+NMLILQE+CTDP+ S V+YAPVD+ +M+VV+NGGD  
Sbjct: 121 QHHGNAVSLLRPN---ATSGNQNNMLILQETCTDPSGSLVVYAPVDVQSMHVVMNGGDSA 177

Query: 687 YVALLPSGFAILPDG----------TSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLS 736
           YV+LLPSGFAILPDG           S        ++S GSL+TVAFQILV+++PTAKL+
Sbjct: 178 YVSLLPSGFAILPDGHCQSPNTAHQGSPSCGGSSSSSSTGSLVTVAFQILVNNLPTAKLT 237

Query: 737 LGSVATVNNLIACTVERIKASL 758
           + SV TV+NL++CT+++IK++L
Sbjct: 238 VESVETVSNLLSCTIQKIKSAL 259


>gi|115480261|ref|NP_001063724.1| Os09g0526200 [Oryza sativa Japonica Group]
 gi|113631957|dbj|BAF25638.1| Os09g0526200, partial [Oryza sativa Japonica Group]
          Length = 302

 Score =  245 bits (625), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 141/264 (53%), Positives = 178/264 (67%), Gaps = 35/264 (13%)

Query: 527 MLKLAERMVISFCAGVSASTAHTWTTLS--------------GTGADDVRVMTRKSVDDP 572
           MLKLA+RM  +FCAGV AS A  W  L               G G D VR+M R SV  P
Sbjct: 35  MLKLAQRMTDNFCAGVCASAAQKWRRLDEWRGEGGGGGGGGGGDGEDKVRMMARHSVGAP 94

Query: 573 GRPPGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGN 631
           G PPG+VLSA TS  LP   P+RVFD+LRDE  R +WDIL+NG  +QEM HIA G+  GN
Sbjct: 95  GEPPGVVLSATTSVRLPGTLPQRVFDYLRDEQRRGDWDILANGEAMQEMDHIAKGQHHGN 154

Query: 632 CVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALL 691
            VSLLR N   + + +Q+NMLILQE+CTD + S V+YAPVD+ +M+VV+NGGD  YV+LL
Sbjct: 155 AVSLLRPN---ATSGNQNNMLILQETCTDSSGSLVVYAPVDVQSMHVVMNGGDSAYVSLL 211

Query: 692 PSGFAILPD----GTSLHGANIGEAAS-------------GGSLLTVAFQILVDSVPTAK 734
           PSGFAILPD    G S   A +G  AS              GSL+TVAFQILV+++PTAK
Sbjct: 212 PSGFAILPDGHNNGASPSPAEVGSGASPNSAAGGGGGSNNTGSLVTVAFQILVNNLPTAK 271

Query: 735 LSLGSVATVNNLIACTVERIKASL 758
           L++ SV TV+NL++CT+++IK++L
Sbjct: 272 LTVESVDTVSNLLSCTIQKIKSAL 295


>gi|449523245|ref|XP_004168634.1| PREDICTED: homeobox-leucine zipper protein HDG11-like, partial
           [Cucumis sativus]
          Length = 324

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 132/325 (40%), Positives = 200/325 (61%), Gaps = 24/325 (7%)

Query: 80  SGDDQEQRPNKK--KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFW 137
           S D+QE   ++K  K YHRH  +QIQ++E+FF++CPHPD+ QR++LSRELGLE  Q+KFW
Sbjct: 11  SPDEQEASNDRKGKKTYHRHNPYQIQQLESFFRQCPHPDENQRRQLSRELGLETKQIKFW 70

Query: 138 FQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPT-AIGEMSFDE 196
           FQNKRTQ K Q+ER +N+ LRTENEK++ +N+  REAL N  CP+CGGP     E   + 
Sbjct: 71  FQNKRTQTKAQNERADNSSLRTENEKIQCENLAIREALRNVICPSCGGPPFGEEERQRNL 130

Query: 197 HHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQ----PG 252
             LRLEN+ L+EE +++S + AKY+GKP+     L P + S  L+L+  +   Q    P 
Sbjct: 131 QKLRLENSHLKEEHEKVSNLLAKYIGKPISQLESLLPVLGSS-LDLSPRSSLTQIVPSPA 189

Query: 253 IGGGEMYGAADLLRSISAPTEA------DKPMIIELAVAAMEELIRMAQMGEPLWMTSLD 306
           +   ++     +L   + P ++      +  +++E A   +EELIR+ ++ EPLWM SL+
Sbjct: 190 V---DLISDPVILDGAATPYQSRGINDLENALMLETAATGLEELIRLLRIDEPLWMKSLN 246

Query: 307 GTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSG 366
               VL+ D Y + FPR    K +  + E+S+   VV M+ I L       ++W+ +F  
Sbjct: 247 DGRYVLHRDSYEKIFPRPNHFKTSSARTESSKALGVVTMSAIQL-------DKWADLFPT 299

Query: 367 IVSRAMTLEVLSTGVAGNYNGALQV 391
           I++ A T  ++  G+ GN +GALQ+
Sbjct: 300 IITNAETFHIIDPGMPGNRSGALQL 324


>gi|328688747|gb|AEB35985.1| ATML1 [Helianthus paradoxus]
          Length = 123

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 105/123 (85%), Positives = 117/123 (95%)

Query: 485 AFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSA 544
           AFGAKRWVATLDRQCERLASVMA NIP+G+VGVIT  +GRKSMLKLAERMV+SFC+GV A
Sbjct: 1   AFGAKRWVATLDRQCERLASVMANNIPSGDVGVITTPEGRKSMLKLAERMVLSFCSGVGA 60

Query: 545 STAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENT 604
           STAHTWT +SG+GADDVRVMTRKS+DDPGRPPGIVLSAATSFW+PV PKRVFDFLRDE++
Sbjct: 61  STAHTWTNMSGSGADDVRVMTRKSMDDPGRPPGIVLSAATSFWIPVQPKRVFDFLRDESS 120

Query: 605 RSE 607
           RS+
Sbjct: 121 RSK 123


>gi|297608080|ref|NP_001061150.2| Os08g0187500 [Oryza sativa Japonica Group]
 gi|255678202|dbj|BAF23064.2| Os08g0187500 [Oryza sativa Japonica Group]
          Length = 326

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/205 (61%), Positives = 142/205 (69%), Gaps = 29/205 (14%)

Query: 6   MIPARNMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEG-------------QLHPLDMTQN 52
           M PAR MP  IGRNG V     S+ L L+Q  +M++              Q+        
Sbjct: 1   MTPARRMPPVIGRNG-VAYESPSAQLPLTQ-ADMLDSHHLQQALQQQYFDQIPVTTTAAA 58

Query: 53  TSESEIARLREE------EFDSTKSGSENHEGA----SGDDQE--QRPNKKKRYHRHTQH 100
            S   +   R +      EF+S KS SEN +GA    SGDDQ+  QRP +KKRYHRHTQH
Sbjct: 59  DSGDNMLHGRADAGGLVDEFES-KSCSENVDGAGDGLSGDDQDPNQRP-RKKRYHRHTQH 116

Query: 101 QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTE 160
           QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK QHERHEN QLR E
Sbjct: 117 QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENAQLRAE 176

Query: 161 NEKLRADNMRYREALSNASCPNCGG 185
           N+KLRA+NMRY+EALS+ASCPNCGG
Sbjct: 177 NDKLRAENMRYKEALSSASCPNCGG 201


>gi|356542201|ref|XP_003539558.1| PREDICTED: uncharacterized protein LOC100788105 [Glycine max]
          Length = 1096

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 118/295 (40%), Positives = 158/295 (53%), Gaps = 33/295 (11%)

Query: 254 GGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLN 313
            G  M  A+DL+   S   E  K  IIE A  AM+EL+++   G PLW         +LN
Sbjct: 63  AGFNMQRASDLIFGFSIFAEPMKTEIIEHARLAMDELVKLGTAGHPLWQPQPKDRFDILN 122

Query: 314 EDEYVRTF------------------PRGI-------------GPKPT-GFKCEASRETA 341
           + EY+R F                  P+ +                PT   + EASR+ A
Sbjct: 123 QIEYLRQFGEVDTALREIVKLIEVGEPQNLPSFDTYQTEQPASKETPTVALQTEASRDMA 182

Query: 342 VVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSP 401
            + M+ IS+VE+LMDVN+WS+ F  IVS+A  +  L  G  G Y+  L VM+AE  +P+ 
Sbjct: 183 FINMSPISIVELLMDVNEWSSAFYNIVSKATLVGTLLGGERG-YDDKLHVMSAEIHLPTT 241

Query: 402 LVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTW 461
            VPTRE Y+ R+ KQ     W VVD+SL+   PSP     +RPSGCLI  MPNG+SKV W
Sbjct: 242 TVPTRECYFGRFSKQLSHNVWGVVDISLEKFIPSPTSNFLKRPSGCLISGMPNGHSKVAW 301

Query: 462 VEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVG 516
           VEHVE D   + N +K LV++  AFGA RW+ +L+R  E L ++ AT     E G
Sbjct: 302 VEHVEADHSHLDNYFKPLVTSTLAFGASRWLNSLNRYGEWLQTLKATTFVADEGG 356



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 98/245 (40%), Positives = 146/245 (59%), Gaps = 12/245 (4%)

Query: 513  GEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSG-TGADDVRVMTRKSVDD 571
              +  +  Q GR + LKLA+RM+ +FCA VSA+  + W  ++   G  DV+VM + ++ D
Sbjct: 840  ASLAFLIPQTGRTNFLKLADRMIKTFCANVSATAGNPWMKITTFLGDTDVKVMVKNNIKD 899

Query: 572  PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGN 631
               PPG  +   TS WL V P R+F+FLR EN+R++WD+LS   V++E+A +  G + GN
Sbjct: 900  TAMPPGTSVVFTTSLWLEVSPNRLFNFLRHENSRTKWDMLSRTLVIREIASLLKGENPGN 959

Query: 632  CVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALL 691
            CVSL+R N     +  +  +  LQES TD T S+V+YAP+D  A+  ++ G +PD V +L
Sbjct: 960  CVSLMRAN----TSKGKLEIFYLQESYTDSTGSYVVYAPLDESALTAIVKGSNPDKVMIL 1015

Query: 692  PSGFAILPDGTSLHGANIGEAASG-GSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACT 750
            PSGF+ILP      G   G+   G GSLLTVAF ++  +     +   S+  ++ +I  T
Sbjct: 1016 PSGFSILP------GRLQGDEDRGTGSLLTVAFHVVESATNKPYIPPESIQIIHKVITDT 1069

Query: 751  VERIK 755
            V  IK
Sbjct: 1070 VTSIK 1074


>gi|60099371|dbj|BAD89976.1| mutant protein of GL2 [Arabidopsis thaliana]
          Length = 397

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/290 (40%), Positives = 163/290 (56%), Gaps = 39/290 (13%)

Query: 78  GASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFW 137
           GA+G+    +  K+K+YHRHT  QI+ MEA FKE PHPD+KQR++LS++LGL P QVKFW
Sbjct: 88  GAAGNKGTNK-RKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVKFW 146

Query: 138 FQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALS--NASCPNCGGPTAIGEMSFD 195
           FQN+RTQ+K   ERHEN+ L+ E EKLR +N   RE+ S  N+SCPNCGG         D
Sbjct: 147 FQNRRTQIKAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGP-------D 199

Query: 196 EHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGG 255
           + H  LEN++L+ E+D++ A   +        YPL +     +   L             
Sbjct: 200 DLH--LENSKLKAELDKLRAALGR------TPYPLQASCSDDQEHRL------------- 238

Query: 256 GEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNED 315
               G+ D    + A    +K  I E++  A  EL +MA  GEP+W+ S++    +LN D
Sbjct: 239 ----GSLDFYTGVFA---LEKSRIAEISNRATLELQKMATSGEPMWLRSVETGREILNYD 291

Query: 316 EYVRTFPRGIGPKPTGFKC-EASRETAVVIMNHISLVEILMDVNQWSTVF 364
           EY++ FP+       G K  EASR+  +V M+   L +  MDV QW   F
Sbjct: 292 EYLKEFPQAQASSFPGRKTIEASRDAGIVFMDAHKLAQSFMDVGQWKETF 341


>gi|218189190|gb|EEC71617.1| hypothetical protein OsI_04034 [Oryza sativa Indica Group]
          Length = 400

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/375 (35%), Positives = 209/375 (55%), Gaps = 28/375 (7%)

Query: 399 PSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSK 458
           PSPLVP R+  ++RYC    EG   V+DVSLD+   S   +CR+ PSG LIQ +     K
Sbjct: 4   PSPLVPARKCTFLRYCNVLNEGLVVVIDVSLDD--GSIFSKCRKMPSGFLIQSIRPNSCK 61

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVI 518
           VT +EHV VDD GVH LY+  ++ G  FGA+RWVAT+ RQ  R+      ++   +    
Sbjct: 62  VTAIEHVLVDDTGVHELYQPCMN-GLVFGARRWVATMARQSARM-----RDVHHNKTAPQ 115

Query: 519 TNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGRPPG 577
            +  GRK+++KLA+ ++ SF  G++A+   TWT + G G + D+RV  R++ +       
Sbjct: 116 VSTKGRKNLMKLADDLLASFAGGITATGGGTWTVVIGAGTEKDIRVAYRRTTEGSSSYNA 175

Query: 578 IVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLR 637
           I LS + S  LP+P ++ FD LR+   R +WD+L +G VV+E   IA G    + V++L 
Sbjct: 176 I-LSVSASLRLPLPMRKTFDLLRNLTHRCKWDVLVHGSVVKEEVTIARGVGNDDTVTVL- 233

Query: 638 VNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVL--------NGGDPDYVA 689
            +C ++    +   +ILQ +  D + SF++Y+ +D   MN ++          G P   +
Sbjct: 234 -HCKRAGREDRGRTMILQNNGYDASGSFMVYSQIDSELMNTMVLSPSDLPPGRGGP---S 289

Query: 690 LLPSGFAILPDGTSLH---GANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNL 746
           L P+GF++LPD  +     G  +GE   GG+L+T+ FQI V      ++   S A+   L
Sbjct: 290 LYPTGFSLLPDVEAAQDSSGIALGEV--GGTLMTMGFQIPVKLASGDRMYSRSAASAIRL 347

Query: 747 IACTVERIKASLSCE 761
           +  T+  +K +L  E
Sbjct: 348 MTDTIALVKKTLMNE 362


>gi|357129501|ref|XP_003566400.1| PREDICTED: homeobox-leucine zipper protein ROC6-like [Brachypodium
           distachyon]
          Length = 403

 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 206/400 (51%), Gaps = 44/400 (11%)

Query: 392 MTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL-----------------RP 434
           M+AE +V +P  P     ++R C +     WAVVDVS+D                    P
Sbjct: 1   MSAELKVLAPRAPVVRVRFMRQCMRLQPRLWAVVDVSVDGFIGHNDEKTLDLYQTAAALP 60

Query: 435 SPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVAT 494
           +     R  PSGC+I+EM +G+ KVT + H E D+  +  L+  L+ +G AFGA+RW+A+
Sbjct: 61  TMYTAYRLLPSGCIIEEMDDGHCKVTCIVHAEYDESNIQPLFHPLLRSGQAFGARRWLAS 120

Query: 495 LDRQCERLA---SVMATNIPTGEVGVITNQDGRKSMLKLAERMVISF----CAGVSASTA 547
           L RQ E  A   S +  N+     G      G+K +L+LA+RM ++F    C   +    
Sbjct: 121 LQRQSEYFAVLRSDLVLNL--NNTGAAMKPAGKKGILELAQRMTMNFYVAMCGLPAGQPW 178

Query: 548 HTWTTLSGTGADDVRVMTR-KSVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENTR 605
           + W    G G++   +     ++D  G     VLSA T+ WLP VP  RVF +L D + R
Sbjct: 179 NDWNGGIGVGSERFELAVHFVTLDHQG-----VLSATTTVWLPGVPAGRVFHYLCDGSRR 233

Query: 606 SEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASF 665
            EWD L++ G ++E+A +A G+  GN VS+LR + + +  +++++ LILQE+  D +  F
Sbjct: 234 GEWDSLASSGPMKEVACVATGQLYGNSVSVLRPS-VYNGTTNKNDKLILQEAYADASCMF 292

Query: 666 VIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANI----------GEAASG 715
           + YAP+D  +M+ V+NGG     +L P GF +LPDG                    A   
Sbjct: 293 MAYAPIDKQSMHQVMNGGGHTSFSLSPCGFIVLPDGQGQQSVQTISAGSSSSAGVSATCA 352

Query: 716 GSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIK 755
           GS+++  +Q  + +     +++G +  + NL    +++IK
Sbjct: 353 GSIVSALYQTELSAPLQQSVAIGLMDDIGNLFCHAIKKIK 392


>gi|124359623|gb|ABN06007.1| Homeodomain-related [Medicago truncatula]
          Length = 365

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/231 (44%), Positives = 138/231 (59%), Gaps = 27/231 (11%)

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           YHRHT  QI+ MEA FKE PHPD+KQR++LS++LGL P QVKFWFQN+RTQ+K   ERHE
Sbjct: 143 YHRHTSEQIRVMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 202

Query: 154 NTQLRTENEKLRADNMRYREALSNASCPNCGGPTA--IGEMSFDEHHLRLENARLREEID 211
           N+ L++E EKLR  N   RE ++ A CPNCG PT    G M+ +E  LR+ENA+L+ E++
Sbjct: 203 NSLLKSEIEKLREKNKTLRETINKACCPNCGVPTTNRDGTMATEEQQLRIENAKLKAEVE 262

Query: 212 RISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGG-EMYGAADLLRSISA 270
           R+ A   KY          +SP         +      Q  I    + Y     L     
Sbjct: 263 RLRAALGKYASG------TMSP---------SCSTSHDQENIKSSLDFYTGIFCL----- 302

Query: 271 PTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF 321
               D+  I+++   AMEELI+MA MGEP+W+ SL+    +LN DEY++ F
Sbjct: 303 ----DESRIMDVVNQAMEELIKMATMGEPMWLRSLETGREILNYDEYMKEF 349


>gi|115480263|ref|NP_001063725.1| Os09g0526300 [Oryza sativa Japonica Group]
 gi|113631958|dbj|BAF25639.1| Os09g0526300, partial [Oryza sativa Japonica Group]
          Length = 131

 Score =  192 bits (489), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 89/131 (67%), Positives = 105/131 (80%), Gaps = 1/131 (0%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK-TQ 148
           KKKRYHRHT  QIQE+EA FKECPHPD+KQR ELSR L LE  QVKFWFQN+RTQMK TQ
Sbjct: 1   KKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQVKFWFQNRRTQMKQTQ 60

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            ERHEN  LR EN+KLRA+NM  REA+ N  C +CGG   +GE+S +E HLR+ENARL++
Sbjct: 61  IERHENALLRQENDKLRAENMTIREAMRNPMCASCGGAAVLGEVSLEEQHLRIENARLKD 120

Query: 209 EIDRISAIAAK 219
           E+DR+ A+A K
Sbjct: 121 ELDRVCALAGK 131


>gi|115467006|ref|NP_001057102.1| Os06g0208100 [Oryza sativa Japonica Group]
 gi|31339109|dbj|BAC77161.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
 gi|113595142|dbj|BAF19016.1| Os06g0208100, partial [Oryza sativa Japonica Group]
          Length = 129

 Score =  191 bits (486), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 84/130 (64%), Positives = 104/130 (80%), Gaps = 1/130 (0%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           ++KRYHRHT  QIQ++EA FKECPHPD+ QR +LSRELGLEP Q+KFWFQN+RTQMK QH
Sbjct: 1   RRKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIKFWFQNRRTQMKAQH 60

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREE 209
           ER +N  LR EN+K+R +N+  REAL N  CP CGGP  +GE  FDE  LR+ENARL+EE
Sbjct: 61  ERADNCFLRAENDKIRCENIAIREALKNVICPTCGGP-PVGEDYFDEQKLRMENARLKEE 119

Query: 210 IDRISAIAAK 219
           +DR+S + +K
Sbjct: 120 LDRVSNLTSK 129


>gi|31339105|dbj|BAC77159.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 131

 Score =  189 bits (480), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 88/131 (67%), Positives = 104/131 (79%), Gaps = 1/131 (0%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK-TQ 148
           KKKRYHR T  QIQE+EA FKECPHPD+KQR ELSR L LE  QVKFWFQN+RTQMK TQ
Sbjct: 1   KKKRYHRXTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQVKFWFQNRRTQMKQTQ 60

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            ERHEN  LR EN+KLRA+NM  REA+ N  C +CGG   +GE+S +E HLR+ENARL++
Sbjct: 61  IERHENALLRQENDKLRAENMTIREAMRNPMCASCGGAAVLGEVSLEEQHLRIENARLKD 120

Query: 209 EIDRISAIAAK 219
           E+DR+ A+A K
Sbjct: 121 ELDRVCALAGK 131


>gi|147820900|emb|CAN60898.1| hypothetical protein VITISV_008021 [Vitis vinifera]
          Length = 267

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/196 (50%), Positives = 129/196 (65%), Gaps = 9/196 (4%)

Query: 444 PSGCLIQEMPNGYSKVTWVEHVEVDDRGV-HNLYKQLVSTGNAFGAKRWVATLDRQCERL 502
           P   L QEM      VTWVEHVEVDD+ + H LY+ LVS   AFGA+R V TL R CERL
Sbjct: 65  PDSVLSQEM------VTWVEHVEVDDKSLTHRLYRDLVSGSLAFGAERMVGTLQRMCERL 118

Query: 503 ASVMATNIPTGEV-GVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV 561
           A +   N PT ++ GVI+  +GR+S++KL  RMV  FC  +S S    +  LS      V
Sbjct: 119 AYLADENTPTRDLAGVISLPEGRRSIMKLGHRMVKDFCGVLSMSGKLDFPQLSEVDTSGV 178

Query: 562 RVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMA 621
           RV  RKS + PG+P G+++SAATS WLP+  + +FDF+RDE  R +WD+LS+G  V E+A
Sbjct: 179 RVSVRKSTE-PGQPGGLIVSAATSLWLPMQCQTIFDFIRDEKMRPQWDVLSSGNPVHEIA 237

Query: 622 HIANGRDTGNCVSLLR 637
           HIANG + GNC S++R
Sbjct: 238 HIANGVNPGNCTSIIR 253


>gi|449533164|ref|XP_004173547.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like, partial
           [Cucumis sativus]
          Length = 365

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/274 (40%), Positives = 149/274 (54%), Gaps = 28/274 (10%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           ++K+YHRHT  QI+EMEA FKE PHPD+KQR++LS+ LGL P QVKFWFQN+RTQ+K   
Sbjct: 112 RRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQ 171

Query: 150 ERHENTQLRTENEKLRADNMRYRE-ALSNASCPNCGGPTAI-GEMSF-DEHHLRLENARL 206
           ERHENT L+ E EKLR +N   RE +     CPNCG   A   ++ F     LR++NA+L
Sbjct: 172 ERHENTLLKAEMEKLREENKAMREISKKKIGCPNCGTADATQDDLVFTTTEQLRIKNAKL 231

Query: 207 REEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLR 266
           + E++++ A   KY            P   + P   + GN          + Y     L 
Sbjct: 232 KAEVEKLRAALGKY------------PQAAASPSTYSSGNEQETSNRICLDFYTGIFGL- 278

Query: 267 SISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIG 326
                   +   I+E    A+EEL  MA  G+PLW+ S++    +LN DEY++TF     
Sbjct: 279 --------ENSRIMEKVDEAVEELKTMAAAGDPLWVRSVETGREILNYDEYLKTFQFSNN 330

Query: 327 PKPT----GFKCEASRETAVVIMNHISLVEILMD 356
              T        EASRETA+V M    LV+  MD
Sbjct: 331 NSNTRNCLKTHIEASRETALVFMEPSRLVQSFMD 364


>gi|357503631|ref|XP_003622104.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
 gi|355497119|gb|AES78322.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
          Length = 201

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 90/188 (47%), Positives = 123/188 (65%), Gaps = 17/188 (9%)

Query: 452 MPNGYSKVTWVEHVEVDDRG-VHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI 510
           MPNG SKVTW+EHVEV+DR  VH LY+ ++ +G AFGA++W+ TL   CER+AS +    
Sbjct: 1   MPNGKSKVTWIEHVEVEDRNPVHMLYRNVIYSGVAFGAEKWLTTLQIMCERIASYLMD-- 58

Query: 511 PTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 570
                 VI + DG+++M+KL +RMV +FC  ++ S +H WTTLS      VR        
Sbjct: 59  -----SVIPSPDGKRTMMKLTQRMVTNFCESINGSASHRWTTLSTLNEITVR-------- 105

Query: 571 DPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTG 630
              +P G VLSA+T  WLP+PP+ VF+FL DE  RS+ ++LSNG  VQE+ HIAN    G
Sbjct: 106 -KSQPNGGVLSASTIIWLPLPPQTVFNFLNDERKRSQSNVLSNGNDVQEVVHIANVSRPG 164

Query: 631 NCVSLLRV 638
           NC+S+ +V
Sbjct: 165 NCISVFKV 172


>gi|297803406|ref|XP_002869587.1| hypothetical protein ARALYDRAFT_492107 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315423|gb|EFH45846.1| hypothetical protein ARALYDRAFT_492107 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 530

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 230/475 (48%), Gaps = 50/475 (10%)

Query: 287 MEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMN 346
           + E+I +A    PLW  S      +LN +EY   F          F  EASR +AV+ ++
Sbjct: 66  VNEIIALATPESPLWSRSQCENIEMLNLNEYYSQFFPWYAKNVPRFFHEASRASAVIRVD 125

Query: 347 HISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEF-QVPSPLVPT 405
              LV  L +  +W ++F  +V   +++E        + N  ++++  EF  + +P++PT
Sbjct: 126 ASWLVRKLENPVRWVSIFPSLVGN-VSIE--------SSNDDVKMIDMEFLTLITPVIPT 176

Query: 406 RESYYVRYCKQHGEGTWAVVDVSL------DNLRPSPAVRCRRRPSGCLIQEMPNGYSKV 459
           R+   +RYC + G  TW + D+S+      D+LRP       R PSG +IQ +PNGYSKV
Sbjct: 177 RKIKVLRYCHRIGNDTWIIADISMYLSSYSDDLRP----EFLRFPSGFIIQHLPNGYSKV 232

Query: 460 TWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVG--- 516
           T +EH    +  + N  +  +S G  FGAK+W+  L R C +   V   +I    V    
Sbjct: 233 TILEHWVYKEDAILNRLRPYLSYGIGFGAKKWLVALQRYCSKTTYVPLMDITNQLVSSSK 292

Query: 517 -------VITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSV 569
                  +I N  GR ++L+++  MV  FC+G      + W  L      DVRV TR+S 
Sbjct: 293 SFSVLFLIIVNSTGRDNLLEVSRHMVHLFCSGTCGVIGYQWRRLGAGRTFDVRVFTRESP 352

Query: 570 DDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDI--LSNGGVVQEMAHIANGR 627
           D    P GI+ SA+    +   P+ +F F+     R  ++   LS  G+ Q +    +  
Sbjct: 353 DMIRHPCGII-SASGLAKIHAKPEMLFPFIYGVKKREIFNHLRLSGNGLKQVLRITRDDT 411

Query: 628 DTGNCVSL--LRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDP 685
              N VSL   R+N     NS++  + +LQE+  + ++S VI++ +D  ++  ++N GD 
Sbjct: 412 TPRNDVSLFSFRLN-----NSTE--VFLLQEAYNEASSSMVIHSILDESSLRKIIN-GDS 463

Query: 686 DYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSV 740
            +    P GF I+P      G N G+    G +++V FQ +V     A   + +V
Sbjct: 464 SFSITYPCGFTIMP------GQNSGD-EEAGCVVSVGFQAIVTEAIVANTMMSNV 511


>gi|60099377|dbj|BAD89978.1| mutant protein of GL2 [Arabidopsis thaliana]
          Length = 339

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/278 (38%), Positives = 155/278 (55%), Gaps = 41/278 (14%)

Query: 78  GASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFW 137
           GA+G+    +  K+K+YHRHT  QI+ MEA FKE PHPD+KQR++LS++LGL P QVKFW
Sbjct: 88  GAAGNKGTNK-RKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVKFW 146

Query: 138 FQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALS--NASCPNCGGPTAIGEMSFD 195
           FQN+RTQ+K   ERHEN+ L+ E EKLR +N   RE+ S  N+SCPNCGG         D
Sbjct: 147 FQNRRTQIKAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGP-------D 199

Query: 196 EHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGG 255
           + H  LEN++L+ E+D++ A   +        YPL +     +   L             
Sbjct: 200 DLH--LENSKLKAELDKLRAALGR------TPYPLQASCSDDQEHRL------------- 238

Query: 256 GEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNED 315
               G+ D    + A    +K  I E++  A  EL +MA  GEP+W+ S++    +LN D
Sbjct: 239 ----GSLDFYTGVFA---LEKSRIAEISNRATLELQKMATSGEPMWLRSVETGREILNYD 291

Query: 316 EYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEI 353
           EY++ FP+    + + F  +      + +  HI+L  +
Sbjct: 292 EYLKEFPQA---QASSFPSKHLEMRGLCLWTHINLPRV 326


>gi|326524876|dbj|BAK04374.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 235

 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 96/220 (43%), Positives = 139/220 (63%), Gaps = 17/220 (7%)

Query: 553 LSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILS 612
           LS +  D VR+ TRK+ + PG+P G++L+A ++ WLP   ++VF+ L DE  R + +I+S
Sbjct: 2   LSDSTEDTVRITTRKNTE-PGQPSGVILTAVSTSWLPFSHQQVFELLADEQQRCQLEIMS 60

Query: 613 NGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPT-ASFVIYAPV 671
           NGG + E+AHIANG    NC+SLLR+N   ++NSSQ+  L+LQES   P   S V++A V
Sbjct: 61  NGGSLHEVAHIANGSHPRNCISLLRIN--SASNSSQNVELLLQESSIHPDGGSLVVFATV 118

Query: 672 DIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANI------GEAASG-------GSL 718
           D+ A+ V ++G DP Y+ LLP GFAI P  +   GA        GE++ G       G L
Sbjct: 119 DVDAIQVTMSGEDPSYIPLLPMGFAIFPATSPSPGATSSDTTGNGESSPGNADEPATGCL 178

Query: 719 LTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           LTV  Q+L  +VP+AKL+L SV  +N+ I  T+ +I  +L
Sbjct: 179 LTVGMQVLASAVPSAKLNLSSVTAINSHICNTIHQITTAL 218


>gi|297735972|emb|CBI23946.3| unnamed protein product [Vitis vinifera]
          Length = 192

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/195 (47%), Positives = 126/195 (64%), Gaps = 11/195 (5%)

Query: 564 MTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHI 623
           M R   D+ GRPPG  +  ATS W+P  P+RVFDFL D +TR+ WDIL+ G VV+E  HI
Sbjct: 1   MIRSGEDEEGRPPGTAIVIATSVWVPASPRRVFDFLHDVHTRNRWDILTCGHVVKETGHI 60

Query: 624 ANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGG 683
            NG D GN VS+L V     +   Q  +++LQES T  T+S+V +APV+   ++++LNGG
Sbjct: 61  DNGCDHGNRVSILEVK----SPEDQIVVILLQESYTTFTSSYVTFAPVEACTLDMILNGG 116

Query: 684 DPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATV 743
            PD+V +LPSGF+ILPDG +  G +       GSL+T+AFQIL +S     +   SVAT+
Sbjct: 117 SPDHVPILPSGFSILPDGPTRDGGS-------GSLVTMAFQILDNSSSATYIPPESVATI 169

Query: 744 NNLIACTVERIKASL 758
             L+  T E IKA++
Sbjct: 170 FKLVTETAECIKAAM 184


>gi|334847850|gb|AEH04620.1| homeodomain leucine zipper family IV protein [Zea mays]
          Length = 165

 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 93/164 (56%), Positives = 115/164 (70%), Gaps = 10/164 (6%)

Query: 239 PLELAVGNFGAQP------GIGGGEMYGAA--DLLRSISA-PTEADKPMIIELAVAAMEE 289
           P +LA G +G QP            ++G A  DLLRS+SA    ADK MI+ELAVAAM+E
Sbjct: 3   PFDLA-GAYGVQPPGGGGGLGAADHLFGGAAGDLLRSVSAGQLSADKSMIVELAVAAMDE 61

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHIS 349
           L+RMA++  PLW   + G    L+E+EY RTFP G+GP+  G + EASR+ AVVIM   S
Sbjct: 62  LLRMARVDAPLWNGGVAGVPQQLDEEEYGRTFPGGLGPRQYGLRPEASRDDAVVIMTRDS 121

Query: 350 LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMT 393
           LVEILMD N+++ VFS IVSRA T EVLSTGVAG+YNGALQV+T
Sbjct: 122 LVEILMDANRFAAVFSSIVSRASTHEVLSTGVAGSYNGALQVLT 165


>gi|326505944|dbj|BAJ91211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 444

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 74/154 (48%), Positives = 109/154 (70%)

Query: 275 DKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKC 334
           D+  ++EL +AAMEEL+++ Q+ +PLW  SL+     LN DEY R F R +GP P G+  
Sbjct: 164 DRDALLELGLAAMEELVKVTQVDDPLWQPSLEIGIETLNYDEYRRAFARVLGPSPAGYVS 223

Query: 335 EASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTA 394
           EA+RE  + I+N + LV  LM+  +WS +F  +V+RA T+E++S+G+ G  +G++Q+M A
Sbjct: 224 EATREVGIAIINSVDLVNSLMNEARWSEMFPCVVARASTMEIISSGMGGTRSGSIQLMRA 283

Query: 395 EFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS 428
           E QV SPLVP RE  ++R+CKQH +G WA+VDVS
Sbjct: 284 ELQVLSPLVPIREVTFLRFCKQHADGLWAIVDVS 317


>gi|42567715|ref|NP_196343.2| START lipid-binding domain-containing protein [Arabidopsis
           thaliana]
 gi|28393170|gb|AAO42017.1| unknown protein [Arabidopsis thaliana]
 gi|28827640|gb|AAO50664.1| unknown protein [Arabidopsis thaliana]
 gi|332003746|gb|AED91129.1| START lipid-binding domain-containing protein [Arabidopsis
           thaliana]
          Length = 541

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 156/564 (27%), Positives = 259/564 (45%), Gaps = 88/564 (15%)

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNAS-CPNCGGPTAIGEMSFDEHHLRLENARLR 207
           H       L  +N+ LRA+N     A+++ S C +C  P     +S +E  L LENARLR
Sbjct: 3   HHLQTRIFLHQQNDLLRAENRARIHAMTSPSICRSCEEPI----ISTEERELWLENARLR 58

Query: 208 EEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
            EID ++    +     + ++  L P   +   E+                YG A ++ S
Sbjct: 59  SEIDTLTCFIWR-----LNSFRNLYPAFATSLTEVG---------------YGVA-VMTS 97

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYV-RTFPRGIG 326
           +S                 ++E++ +A+   P+W ++       LN DEY  + FP    
Sbjct: 98  LS-----------------LKEVVFLARQRTPMWTSN-----GRLNLDEYYSKLFPWYAR 135

Query: 327 PKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG-NY 385
             P GF  E SR +A V  +  SLV  LM+   W  +F  I++  +++E    G+   N 
Sbjct: 136 NAP-GFVHEVSRASAFVPCDASSLVANLMNHVSWQKIFPSIIAD-VSVESQQRGLQKINV 193

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL------DNLRPSPAVR 439
           N   Q+        SPL+ TR    +R  +   + TWA+ ++S+       +LRP     
Sbjct: 194 NFMPQI--------SPLIQTRNVKLLRRSRHIEDDTWAIAEISMYFSSYAQHLRPEYM-- 243

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEH-VEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
             R PSG LIQ + NG SKVT ++H V  ++ G++       ++ + FGA+RW+  L + 
Sbjct: 244 --RFPSGYLIQHIANGISKVTILDHWVYKEEEGMNTF-----NSNSEFGAQRWLTALQKH 296

Query: 499 CERLASVMATNIPT-GEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLS--G 555
                 V   +IP+ G    I +Q  RK++L L+  MV  FC+GV   T   W  L+  G
Sbjct: 297 YYNTCPV---SIPSIGHNIQIFDQICRKNLLNLSSFMVNVFCSGVCGITGQRWNRLNTVG 353

Query: 556 TGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGG 615
             A+++R+ T++S    G  P +++SA     +   P+ +F  +     +  W  L +  
Sbjct: 354 VSANNIRMFTQESRGMSG-IPCVLVSATGLARMHTKPEVMFGLINGAEKQEIWSYLESAK 412

Query: 616 VVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVA 675
            ++E+  I    ++ N VS+  +    S         ++QE+  D + + +I+  V+   
Sbjct: 413 DMKELIRIGRHPNSWNEVSVFSIEWKGS-----KEWYLIQETYYDESGAMIIHTCVEAPY 467

Query: 676 MNVVLNGGDPDYVALLPSGFAILP 699
               +NGGD   V LLPSGF I+P
Sbjct: 468 FAAAINGGDLSGVELLPSGFTIIP 491


>gi|334187482|ref|NP_001190248.1| START lipid-binding domain-containing protein [Arabidopsis
           thaliana]
 gi|332003747|gb|AED91130.1| START lipid-binding domain-containing protein [Arabidopsis
           thaliana]
          Length = 536

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 154/563 (27%), Positives = 259/563 (46%), Gaps = 91/563 (16%)

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNAS-CPNCGGPTAIGEMSFDEHHLRLENARLR 207
           H       L  +N+ LRA+N     A+++ S C +C  P     +S +E  L LENARLR
Sbjct: 3   HHLQTRIFLHQQNDLLRAENRARIHAMTSPSICRSCEEPI----ISTEERELWLENARLR 58

Query: 208 EEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
            EID ++    +     + ++  L P   +   E+                YG A ++ S
Sbjct: 59  SEIDTLTCFIWR-----LNSFRNLYPAFATSLTEVG---------------YGVA-VMTS 97

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYV-RTFPRGIG 326
           +S                 ++E++ +A+   P+W ++       LN DEY  + FP    
Sbjct: 98  LS-----------------LKEVVFLARQRTPMWTSN-----GRLNLDEYYSKLFPWYAR 135

Query: 327 PKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG-NY 385
             P GF  E SR +A V  +  SLV  LM+   W  +F  I++  +++E    G+   N 
Sbjct: 136 NAP-GFVHEVSRASAFVPCDASSLVANLMNHVSWQKIFPSIIAD-VSVESQQRGLQKINV 193

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL------DNLRPSPAVR 439
           N   Q+        SPL+ TR    +R  +   + TWA+ ++S+       +LRP     
Sbjct: 194 NFMPQI--------SPLIQTRNVKLLRRSRHIEDDTWAIAEISMYFSSYAQHLRPEYM-- 243

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEH-VEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
             R PSG LIQ + NG SKVT ++H V  ++ G++       ++ + FGA+RW+  L + 
Sbjct: 244 --RFPSGYLIQHIANGISKVTILDHWVYKEEEGMNTF-----NSNSEFGAQRWLTALQKH 296

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLS--GT 556
                 V   +IP+    ++ +Q  RK++L L+  MV  FC+GV   T   W  L+  G 
Sbjct: 297 YYNTCPV---SIPS----IVFDQICRKNLLNLSSFMVNVFCSGVCGITGQRWNRLNTVGV 349

Query: 557 GADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGV 616
            A+++R+ T++S    G  P +++SA     +   P+ +F  +     +  W  L +   
Sbjct: 350 SANNIRMFTQESRGMSG-IPCVLVSATGLARMHTKPEVMFGLINGAEKQEIWSYLESAKD 408

Query: 617 VQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAM 676
           ++E+  I    ++ N VS+  +    S         ++QE+  D + + +I+  V+    
Sbjct: 409 MKELIRIGRHPNSWNEVSVFSIEWKGS-----KEWYLIQETYYDESGAMIIHTCVEAPYF 463

Query: 677 NVVLNGGDPDYVALLPSGFAILP 699
              +NGGD   V LLPSGF I+P
Sbjct: 464 AAAINGGDLSGVELLPSGFTIIP 486


>gi|357448587|ref|XP_003594569.1| Homeodomain protein (HB2) [Medicago truncatula]
 gi|355483617|gb|AES64820.1| Homeodomain protein (HB2) [Medicago truncatula]
          Length = 335

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/321 (33%), Positives = 174/321 (54%), Gaps = 12/321 (3%)

Query: 441 RRRPSGCLIQEMPNGYSKVTWVEHVEVDDR-GVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
           ++ PSGCLIQ++    SKV+W+EHVEVD +   H++Y+ +V+   AFGA+RW+  L R  
Sbjct: 17  KKFPSGCLIQQISTETSKVSWIEHVEVDLKIQTHSMYRDIVNNAIAFGAERWLMELRRIG 76

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTW-TTLSGTGA 558
           ER  S     +   + GVIT  +GR+ ++KLA +++  F   ++ S+       ++ T  
Sbjct: 77  ERCGSAALEYMHFYDNGVITLPEGRRCVMKLAHQVLKEFSKNLTMSSKSDLPQYIADTDD 136

Query: 559 DDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQ 618
             VR    K+ +        ++  A+S  LP+P   VFDFLRD   R EWD   +G    
Sbjct: 137 SGVRFSIPKNRNLFLSNDPFIVIVASSVSLPLPSHTVFDFLRDPARRFEWDKFCDGNPWH 196

Query: 619 EMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNV 678
           E+AHI+ G    + VS+++       +  +  + I+QE   DP  S+V+Y+P++   +N+
Sbjct: 197 EIAHISTGTHPNHYVSIIQ----PLVSPPKDGVKIIQECFIDPLGSYVVYSPLNTQELNM 252

Query: 679 VLNGGDPDYVAL-LPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSL 737
            +NG D   V+L +PSGF I    +    +   ++ S GSLLTVAFQ+ + +        
Sbjct: 253 AINGHDLSNVSLIIPSGFLI----SEDSKSLSKDSKSRGSLLTVAFQMHMPAPLITNFES 308

Query: 738 GSVATVNNLIACTVERIKASL 758
            + A+ N L+   V+ IK +L
Sbjct: 309 AADAS-NALMTTVVQSIKHAL 328


>gi|197309412|gb|ACH61057.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
          Length = 118

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 77/116 (66%), Positives = 93/116 (80%), Gaps = 2/116 (1%)

Query: 441 RRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCE 500
           RR PSGCLIQ+MPNGYSKVTWVEH E DDRGVH LY+ L+++G AFGA+RW+ATL RQCE
Sbjct: 1   RRLPSGCLIQDMPNGYSKVTWVEHAEYDDRGVHRLYRSLLNSGMAFGAQRWLATLQRQCE 60

Query: 501 RLASVMAT-NIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSG 555
            LA ++AT N+P     + T  +GR+SML+LA+RM  +FCAGVSAST HTW  LSG
Sbjct: 61  CLAILIATANVPRDRTAIPT-PNGRRSMLRLAQRMTDNFCAGVSASTVHTWNKLSG 115


>gi|197309382|gb|ACH61042.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309384|gb|ACH61043.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309386|gb|ACH61044.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309388|gb|ACH61045.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309390|gb|ACH61046.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309392|gb|ACH61047.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309394|gb|ACH61048.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309396|gb|ACH61049.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309400|gb|ACH61051.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309402|gb|ACH61052.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309404|gb|ACH61053.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309406|gb|ACH61054.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309408|gb|ACH61055.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309410|gb|ACH61056.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309414|gb|ACH61058.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309416|gb|ACH61059.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309418|gb|ACH61060.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309420|gb|ACH61061.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309422|gb|ACH61062.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309424|gb|ACH61063.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309426|gb|ACH61064.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309428|gb|ACH61065.1| homeodomain protein (HB2) [Pseudotsuga macrocarpa]
          Length = 118

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/116 (66%), Positives = 93/116 (80%), Gaps = 2/116 (1%)

Query: 441 RRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCE 500
           RR PSGCLIQ+MPNGYSKVTWVEH E DDRGVH LY+ L+++G AFGA+RW+ATL RQCE
Sbjct: 1   RRLPSGCLIQDMPNGYSKVTWVEHAEYDDRGVHRLYRSLLNSGMAFGAQRWLATLQRQCE 60

Query: 501 RLASVMAT-NIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSG 555
            LA ++AT N+P     + T  +GR+SML+LA+RM  +FCAGVSAST HTW  LSG
Sbjct: 61  CLAILIATANVPRDPTAIPT-PNGRRSMLRLAQRMTDNFCAGVSASTVHTWNKLSG 115


>gi|357129503|ref|XP_003566401.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Brachypodium distachyon]
          Length = 375

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/283 (33%), Positives = 148/283 (52%), Gaps = 7/283 (2%)

Query: 96  RHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENT 155
           RH + QIQ++EA F++CPHPD++ R +LS+ LG+  LQVKFWFQN+R+  K + E+ E  
Sbjct: 70  RHRREQIQQLEAVFQQCPHPDEQLRLDLSKRLGMGLLQVKFWFQNRRSAKKNKMEQQEGK 129

Query: 156 QLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFD---EHHLRLENARLREEIDR 212
           +LR ENE L A+N   +  + + +C  CGGP        D   +  LR+ENA L++++ R
Sbjct: 130 KLREENEMLLAENKAMKAEIQSRTCIGCGGPRMHIHDCRDTPEKQRLRMENAMLKDQLMR 189

Query: 213 ISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVG-NFGAQPGIGGGEMYGAADLLRSISAP 271
                +   GK V +    +            G N G +P +        A  + S +  
Sbjct: 190 TKVFVSVLTGKDVDDAAAAAEEGALPAAYSPYGLNNGGRPLVINPAAAVPAPSMSSAARS 249

Query: 272 TEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVR-TFPRGIGPKPT 330
             A +  +++  + A EE   +A M EP+W+ + DG   VLN   Y   T+P  +G  P 
Sbjct: 250 IAASQITLLDHLIGACEEFKMIASMNEPMWLRTSDGD--VLNNQAYKNATYPGILGICPK 307

Query: 331 GFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMT 373
           GF  + +R T +V+ N   L  I MD  +WS +F GI+   +T
Sbjct: 308 GFAVDGTRTTGIVLGNAADLTSIFMDPARWSEMFPGIIVAGVT 350


>gi|197309398|gb|ACH61050.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
          Length = 113

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/111 (65%), Positives = 89/111 (80%), Gaps = 2/111 (1%)

Query: 446 GCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASV 505
           GCLIQ+MPNGYSKVTWVEH E DDRGVH LY+ L+++G AFGA+RW+ATL RQCE LA +
Sbjct: 1   GCLIQDMPNGYSKVTWVEHAEYDDRGVHRLYRSLLNSGMAFGAQRWLATLQRQCECLAIL 60

Query: 506 MAT-NIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSG 555
           +AT N+P     + T  +GR+SML+LA+RM  +FCAGVSAST HTW  LSG
Sbjct: 61  IATANVPRDPTAIPT-PNGRRSMLRLAQRMTDNFCAGVSASTVHTWNKLSG 110


>gi|7546704|emb|CAB87282.1| putative protein [Arabidopsis thaliana]
          Length = 526

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 239/520 (45%), Gaps = 85/520 (16%)

Query: 192 MSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQP 251
           +S +E  L LENARLR EID ++    +     + ++  L P   +   E+         
Sbjct: 30  ISTEERELWLENARLRSEIDTLTCFIWR-----LNSFRNLYPAFATSLTEVG-------- 76

Query: 252 GIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAV 311
                  YG A ++ S+S                 ++E++ +A+   P+W ++       
Sbjct: 77  -------YGVA-VMTSLS-----------------LKEVVFLARQRTPMWTSN-----GR 106

Query: 312 LNEDEYV-RTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSR 370
           LN DEY  + FP      P GF  E SR +A V  +  SLV  LM+   W  +F  I++ 
Sbjct: 107 LNLDEYYSKLFPWYARNAP-GFVHEVSRASAFVPCDASSLVANLMNHVSWQKIFPSIIAD 165

Query: 371 AMTLEVLSTGVAG-NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL 429
            +++E    G+   N N   Q+        SPL+ TR    +R  +   + TWA+ ++S+
Sbjct: 166 -VSVESQQRGLQKINVNFMPQI--------SPLIQTRNVKLLRRSRHIEDDTWAIAEISM 216

Query: 430 ------DNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEH-VEVDDRGVHNLYKQLVST 482
                  +LRP       R PSG LIQ + NG SKVT ++H V  ++ G++       ++
Sbjct: 217 YFSSYAQHLRPEYM----RFPSGYLIQHIANGISKVTILDHWVYKEEEGMNTF-----NS 267

Query: 483 GNAFGAKRWVATLDRQCERLASVMATNIPT-GEVGVITNQDGRKSMLKLAERMVISFCAG 541
            + FGA+RW+  L +       V   +IP+ G    I +Q  RK++L L+  MV  FC+G
Sbjct: 268 NSEFGAQRWLTALQKHYYNTCPV---SIPSIGHNIQIFDQICRKNLLNLSSFMVNVFCSG 324

Query: 542 VSASTAHTWTTLS--GTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFL 599
           V   T   W  L+  G  A+++R+ T++S    G  P +++SA     +   P+ +F  +
Sbjct: 325 VCGITGQRWNRLNTVGVSANNIRMFTQESRGMSG-IPCVLVSATGLARMHTKPEVMFGLI 383

Query: 600 RDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCT 659
                +  W  L +   ++E+  I    ++ N VS+  +              ++QE+  
Sbjct: 384 NGAEKQEIWSYLESAKDMKELIRIGRHPNSWNEVSVFSI-------EGSKEWYLIQETYY 436

Query: 660 DPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 699
           D + + +I+  V+       +NGGD   V LLPSGF I+P
Sbjct: 437 DESGAMIIHTCVEAPYFAAAINGGDLSGVELLPSGFTIIP 476


>gi|125549829|gb|EAY95651.1| hypothetical protein OsI_17516 [Oryza sativa Indica Group]
          Length = 162

 Score =  149 bits (376), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 73/87 (83%), Positives = 79/87 (90%), Gaps = 4/87 (4%)

Query: 64  EEFDSTKSGSENHEGASGDDQE--QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK 121
           +EF+S KSGSEN +G S DDQ+  QRP +KKRYHRHTQHQIQEMEAFFKECPHPDDKQRK
Sbjct: 75  DEFES-KSGSENVDGVSVDDQDPNQRP-RKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK 132

Query: 122 ELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           ELSRELGLEPLQVKFWFQNKRTQMK +
Sbjct: 133 ELSRELGLEPLQVKFWFQNKRTQMKVK 159


>gi|357487803|ref|XP_003614189.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
 gi|355515524|gb|AES97147.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
          Length = 373

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/190 (42%), Positives = 121/190 (63%), Gaps = 5/190 (2%)

Query: 66  FDSTKSGSENHEGASGDDQEQRPNKKKRYHR-HTQHQIQEMEAFFKECPHPDDKQRKELS 124
           FDS +S  + H      D+ Q  +KKKRY R HT +Q++ +E  FKECP P++KQ+ +LS
Sbjct: 12  FDS-QSKKKLHRRPRTPDEIQ--SKKKRYRRPHTPNQLERLEEVFKECPKPNEKQKLQLS 68

Query: 125 RELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCG 184
           +EL L   Q++FWFQNKRTQ K + ER++N  LR EN+K+R +N+  +EAL N+ C + G
Sbjct: 69  KELALSYGQIRFWFQNKRTQTKAKLERNDNRLLRAENDKIRCENISMKEALENSICSSGG 128

Query: 185 GPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAV 244
            P   G+  FD   LR EN  L++E+ + S+I ++Y G+ V  +P + PP+    L+  +
Sbjct: 129 CPPINGDCYFDRKRLRFENILLKDELYKESSIISEYTGRSVSWFPPV-PPIHISSLDSTM 187

Query: 245 GNFGAQPGIG 254
           G+F  Q  +G
Sbjct: 188 GSFSGQGLVG 197


>gi|147790308|emb|CAN61201.1| hypothetical protein VITISV_009744 [Vitis vinifera]
          Length = 839

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 168/756 (22%), Positives = 297/756 (39%), Gaps = 176/756 (23%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 7   KYVRYTPEQVEALERLYHDCPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 64

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A N    E                            EN RL++
Sbjct: 65  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 95

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++    + +  +             ++   LA  +   +  +  G+ +     L   
Sbjct: 96  QVSQLVYENSFFRQQ-------------TQNATLATTDTSCESVVTSGQHH-----LTPQ 137

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 138 HPPRDASPAGLLSIAEETLTEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGIV 186

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W      +      L VLSTG      
Sbjct: 187 AISHGCTGVAARACGLVSLEPTRVAEILKDWPSWYRECRNVD----VLNVLSTG----NG 238

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  V + SL+N +  P+       VR
Sbjct: 239 GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQYFVR 298

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
             + PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L RQ 
Sbjct: 299 AEKLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAAL-RQL 357

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            +++  ++    TG         GR+  ++  L +R+   F   V+  T   W+ +   G
Sbjct: 358 RQISQEVSQPTNTGW--------GRRPAALRALGQRLTKGFNEAVNGFTDEGWSMMESDG 409

Query: 558 ADDVRVMTRKSVDDPGRPPGIVLSAATSF---------------WLPVPPKRVFDFLRDE 602
            DDV ++   S   P +  G+ LS A+ F                  VPP  +  FLR+ 
Sbjct: 410 IDDVTLLVNSS---PAKMMGVNLSYASGFPSMSNAVLCAKASMLLQNVPPAILLRFLREH 466

Query: 603 NTRSEW-----DILS-------------------NGGVVQEMAHIANGRDTGNCVSLLRV 638
             RSEW     D  S                    G V+  +AH     +     +L+R 
Sbjct: 467 --RSEWADSSIDAYSAAAVKAGPCTLPVSRAGGYGGQVILPLAHTIEHEEA----NLIRF 520

Query: 639 NCLQS--------------ANSSQSNMLILQESCTDP------TASFVIYAPVD------ 672
           NCLQ                +   S  + L + C+        T S +I+AP+D      
Sbjct: 521 NCLQQFMEVIKLENVDHYREDLMMSGDVFLLQLCSGVDDNAVGTCSELIFAPIDASFSDD 580

Query: 673 ---------IVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAF 723
                    I+ ++  ++G  P+    L S   + P G      N G   S  S++T++F
Sbjct: 581 APLLPSGFRIIPLDSGVDGSSPNRTLDLASSLEVGPAGNKASSDNSGHTGSAKSVMTISF 640

Query: 724 QILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           Q   +      ++  +   V ++I+ +V+R+  +LS
Sbjct: 641 QFAFEMHLQENVASMARQYVRSIIS-SVQRVALALS 675


>gi|359476025|ref|XP_002283717.2| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Vitis
           vinifera]
 gi|296081833|emb|CBI20838.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 163/741 (21%), Positives = 293/741 (39%), Gaps = 157/741 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYVRYTPEQVEALERLYHDCPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A N    E                            EN RL++
Sbjct: 76  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 106

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++    + +  +             ++   LA  +   +  +  G+ +     L   
Sbjct: 107 QVSQLVYENSFFRQQ-------------TQNATLATTDTSCESVVTSGQHH-----LTPQ 148

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 149 HPPRDASPAGLLSIAEETLTEFLSKAT-----------GTAVEWVQMPGMKPGPDSIGIV 197

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W      +      L VLSTG      
Sbjct: 198 AISHGCTGVAARACGLVSLEPTRVAEILKDWPSWYRECRNVD----VLNVLSTG----NG 249

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  V + SL+N +  P+       VR
Sbjct: 250 GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQYFVR 309

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
             + PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L RQ 
Sbjct: 310 AEKLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAAL-RQL 368

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            +++  ++    TG         GR+  ++  L +R+   F   V+  T   W+ +   G
Sbjct: 369 RQISQEVSQPTNTGW--------GRRPAALRALGQRLTKGFNEAVNGFTDEGWSMMESDG 420

Query: 558 ADDVRVMTRKSVDDPGRPPGIVLSAATSF---------------WLPVPPKRVFDFLRDE 602
            DDV ++   S   P +  G+ LS A+ F                  VPP  +  FLR+ 
Sbjct: 421 IDDVTLLVNSS---PAKMMGVNLSYASGFPSMSNAVLCAKASMLLQNVPPAILLRFLREH 477

Query: 603 NTRSEW-----DILS-------------------NGGVVQEMAHIANGRDTGNCVSLLRV 638
             RSEW     D  S                    G V+  +AH     +    + L  V
Sbjct: 478 --RSEWADSSIDAYSAAAVKAGPCTLPVSRAGGYGGQVILPLAHTIEHEEFMEVIKLENV 535

Query: 639 NCLQSANSSQSNMLILQ-----ESCTDPTASFVIYAPVD---------------IVAMNV 678
           +  +       ++ +LQ     +     T S +I+AP+D               I+ ++ 
Sbjct: 536 DHYREDLMMSGDVFLLQLCSGVDDNAVGTCSELIFAPIDASFSDDAPLLPSGFRIIPLDS 595

Query: 679 VLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLG 738
            ++G  P+    L S   + P G      N G   S  S++T++FQ   +      ++  
Sbjct: 596 GVDGSSPNRTLDLASSLEVGPAGNKASSDNSGHTGSAKSVMTISFQFAFEMHLQENVASM 655

Query: 739 SVATVNNLIACTVERIKASLS 759
           +   V ++I+ +V+R+  +LS
Sbjct: 656 ARQYVRSIIS-SVQRVALALS 675


>gi|383930759|gb|AFH56718.1| class III HD-Zip protein 8 [Prunus persica]
          Length = 840

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 168/741 (22%), Positives = 293/741 (39%), Gaps = 157/741 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 21  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 78

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                            EN RL++
Sbjct: 79  -QRKEASRLQTVNRKLTAMNKLLME----------------------------ENDRLQK 109

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y  +   N              LA  +   +  +  G+ +     L   
Sbjct: 110 QVSQL-VYENSYFRQQTQN------------TNLATTDTSCESVVTSGQHH-----LTPQ 151

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 152 HPPRDASPAGLLSIAEETLAEFLSKAT-----------GTAVEWVQMPGMKPGPDSIGIV 200

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W   F    S    L VLSTG      
Sbjct: 201 AISHGCTGVAARACGLVGLEPTRVAEILKDRPSW---FRNCRS-VDVLNVLSTG----NG 252

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  V + SL+N +  P+       VR
Sbjct: 253 GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQNFVR 312

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L R  
Sbjct: 313 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAAL-RNL 371

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            +++  ++     G         GR+  ++  L++R+   F   V+  T   W+ L   G
Sbjct: 372 RQISQEVSQPNAAGW--------GRRPAALRALSQRLSKGFNEAVNGFTDEGWSILESDG 423

Query: 558 ADDVRVMTRKSVDDPGRPPG-------------IVLSAATSFWLP-VPPKRVFDFLRDEN 603
            DDV ++   S   PG+  G              VL A  S  L  VPP  +  FLR+  
Sbjct: 424 VDDVTLLVNSS---PGKMMGANLYANGVPSMSNAVLCAKASMLLQNVPPAILLRFLREH- 479

Query: 604 TRSEW-----DILS---------------NGG----VVQEMAHIANGRDTGNCVSLLRVN 639
            RSEW     D  S                GG    V+  +AH     +    + +  + 
Sbjct: 480 -RSEWADRSIDAYSAAAIKPGPCGLLGSRAGGFGDQVIHPLAHTIEHEEFMEVIKIENMG 538

Query: 640 CLQSANSSQSNMLILQESCTD------PTASFVIYAPVD---------------IVAMNV 678
             +      +  + L + C+        T + +++AP+D               I+ ++ 
Sbjct: 539 HYREDMIMPAADIFLLQLCSGVDENSVGTCAELVFAPIDASFSDDGPILPSGFRIIPLDS 598

Query: 679 VLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLG 738
            ++   P+    L S   + P G+   G N G + +  S++T+AFQ   +      ++  
Sbjct: 599 RMDAPSPNRTLDLASALEVGPAGSRASGDNAGHSGNTKSVMTIAFQFAFEIHLQDNVASM 658

Query: 739 SVATVNNLIACTVERIKASLS 759
           +   V ++IA +V+R+  +LS
Sbjct: 659 ARQYVRSIIA-SVQRVALALS 678


>gi|89514857|gb|ABD75303.1| class III homeodomain-leucine zipper protein C3HDZ2 [Psilotum
           nudum]
          Length = 819

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 170/736 (23%), Positives = 287/736 (38%), Gaps = 169/736 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q+  +E+ + ECP P   +R++L +E      +EP Q+K WFQN+R + K +
Sbjct: 18  KYVRYTTEQVDALESLYNECPKPSSLRRQQLIKECPILSNIEPKQIKVWFQNRRCREKQR 77

Query: 149 HE----RHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            E    ++ N +L   N+ L  +N R ++ ++                      L  EN 
Sbjct: 78  KEASRLQNVNAKLTAMNKLLMEENDRLQKQVA---------------------QLLYENG 116

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL 264
            +R+++     I        VV   L     P  P                         
Sbjct: 117 YIRQQLQH-GGITTDTSCDSVVTSGLQHLSTPQHP------------------------- 150

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRG 324
                  T+A    I+ LA   + E +  A            GTA      ++++     
Sbjct: 151 ------QTDAAHSGILSLAEETLTEFLGKA-----------TGTAI-----DWIQMPGMK 188

Query: 325 IGPKPTGF-----KCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVL 377
            GP  TG       C   A+R   +V +    +VE+L D   W         +  TL   
Sbjct: 189 PGPDMTGMVNISHGCPGVAARACGLVGLEPARVVEVLKDRPSWHR----DCRQLATLYAT 244

Query: 378 STGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA 437
           +T    N NG ++V+  +   P+ L P R+   +RY     +G++ + + SL+     P 
Sbjct: 245 NT----NNNGKMEVLYMQMYAPTTLAPARDFCTLRYTSLLEDGSYVICERSLNGTLGVPT 300

Query: 438 -------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKR 490
                  VR    PSG LI+      S +  V+H++++   V  + + L  +      K 
Sbjct: 301 APPMQSFVRAEMHPSGYLIRPCEGSGSVIIIVDHMDLEPWTVPEVLRPLYESSAILAHKI 360

Query: 491 WVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTW 550
            +  + R  ++LA   A  +P G            ++  L++R+   F   V+      W
Sbjct: 361 TIEAM-RHLQQLAQQAAIEVPGG-------VQQPPAVWSLSQRLARGFNDAVNGFADDGW 412

Query: 551 TTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDI 610
           T++S  G DDV V+ +   +  GR   ++ + A+     VPP  +  FLR+   RSEW  
Sbjct: 413 TSVSNEGMDDVTVIVKS--NPKGRELSVLCAKASMLLQNVPPGLLVRFLREH--RSEWAD 468

Query: 611 ---------LSNGGVVQEMAHIANGR---------DTGNCVSLLRVNCLQSANSSQSNML 652
                     SN G+      + N +              + LL+    Q    S  +M 
Sbjct: 469 NNSETNALRFSNLGISGPCGDVYNSQILQPQFPADQRDEFLELLKFEGPQHGTLSSMDMF 528

Query: 653 ILQ------ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-DGTSLH 705
           +LQ      ES    +A  +++AP+D             D V LLPSGF ++P + +SL 
Sbjct: 529 LLQLCSGIEESAAGASAQ-IVFAPID---------SSISDDVLLLPSGFRVIPLENSSLG 578

Query: 706 G---------ANIGEAASGG-------------SLLTVAFQILVDSVPTAKLSLGSVATV 743
           G         A+  E   GG             S+LT+AFQ   +S    K++  +   V
Sbjct: 579 GGTPTRTLDLASTLEIGLGGCKHANDNPMLNLRSVLTIAFQFTFESHIQEKVATMARQYV 638

Query: 744 NNLIACTVERIKASLS 759
            + +A +V++I  +LS
Sbjct: 639 RS-VASSVQQIAMALS 653


>gi|24417147|dbj|BAC22512.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 836

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 162/750 (21%), Positives = 286/750 (38%), Gaps = 178/750 (23%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 19  KYVRYTPEQVEALERLYHDCPKPSSHRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 76

Query: 149 HERHENTQLRTENEKLRA-------DNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRL 201
            +R E ++L+  N KL A       +N R ++ +SN                     L  
Sbjct: 77  -QRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSN---------------------LVY 114

Query: 202 ENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGA 261
           EN+  R++   ++ +      + VV                             G+ + +
Sbjct: 115 ENSHFRQQTQNMALVTTDTSCESVVT---------------------------SGQHHSS 147

Query: 262 ADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF 321
                    P +A    ++ +A   + E +  A            GTA    +   ++  
Sbjct: 148 PQ-----HPPRDASPAGLLSIAEETLTEFLSKAT-----------GTAVEWVQMPGMKPG 191

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C   ASR   +V +    + EIL D   W      +      L VL+T
Sbjct: 192 PDSIGIIAISHGCTGVASRACGLVGLEPTRVAEILKDRPSWYRDCRAVD----VLNVLTT 247

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-- 437
           G     N  ++++  +   P+ L P R+ + +RY     +G+  V + SL+N +  P   
Sbjct: 248 GT----NRTIELLYMQLYAPTTLAPARDFWLLRYTSALEDGSLVVCERSLNNTQNGPTMP 303

Query: 438 -----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                VR +  PSG LI+    G S +  V+HV+ +   V  + + L  +      +  +
Sbjct: 304 PVPHFVRAKILPSGYLIRPCDGGGSIIHIVDHVDFEAGSVPEVLRPLYESSTLLAQRTTL 363

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWT 551
           A   RQ  +++  ++          +T+   R + L+ LA+RM   F   ++      WT
Sbjct: 364 AAF-RQLRQISQEISQP-------AVTSWGRRPAALRALAQRMSRGFNEAINGLNDEGWT 415

Query: 552 TLSGTGADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFL 599
            + G G DDV V+   S D             P     ++ + A+     VPP  +  FL
Sbjct: 416 MMEGDGVDDVTVLVNSSPDKVMGATPMFADGFPSISHAVLCAKASMLLQNVPPAILTRFL 475

Query: 600 RDENTRSEWDILS------------------------NGGVVQEMAHIANGRDTGNCVSL 635
           R+   RSEW   S                         G V+  +AH     +    + L
Sbjct: 476 REH--RSEWADSSIDCYAATSVKGGACGIPLARSGGFGGQVILPLAHTIEHEEFMEVIKL 533

Query: 636 LRVNCLQSANSSQSNMLILQESCTDP------TASFVIYAPVDIVAMNVVLNGGDPDYVA 689
             ++  ++ +      +   + C         T++ +I+AP+D             D   
Sbjct: 534 ENMSPYRAEDMLIPGDIFFLQLCNGVDENAIGTSAELIFAPID---------ASFTDDAP 584

Query: 690 LLPSGFAILP--------------------DGTSLHGANIGEAASGGSLLTVAFQILVDS 729
           LLPSGF I+P                     G       +G++ S  S++T+AFQ   + 
Sbjct: 585 LLPSGFRIIPLNNNSQNPTRDLASTLEVGPPGKRSPADYLGQSGSTKSVMTIAFQFAFEI 644

Query: 730 VPTAKLSLGSVATVNNLIACTVERIKASLS 759
                ++  +   V ++IA +V+R+  +LS
Sbjct: 645 HLQESIAAMARQYVRSIIA-SVQRVALALS 673


>gi|8778268|gb|AAF79277.1|AC023279_26 F12K21.1 [Arabidopsis thaliana]
          Length = 164

 Score =  126 bits (317), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 57/126 (45%), Positives = 77/126 (61%), Gaps = 1/126 (0%)

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           E+  +   R H H+ HQ+Q +EAFF ECPHPDD QR++L  EL L+  Q+KFWFQN+RTQ
Sbjct: 12  EEGIDSNNRRH-HSNHQVQRLEAFFHECPHPDDSQRRQLGNELNLKHKQIKFWFQNRRTQ 70

Query: 145 MKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            +  +E+ +N  LR EN K+R  N    +AL    CP CGGP    E   +   LR +N 
Sbjct: 71  ARIHNEKADNIALRVENMKIRCVNEAMEKALETVLCPPCGGPHGKEEQLCNLQKLRTKNV 130

Query: 205 RLREEI 210
            L+ E+
Sbjct: 131 ILKTEV 136


>gi|449436888|ref|XP_004136224.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like [Cucumis
           sativus]
          Length = 842

 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 166/739 (22%), Positives = 288/739 (38%), Gaps = 152/739 (20%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 22  KYVRYTPEQVEALERLYYECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 79

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                            EN RL++
Sbjct: 80  -QRKEASRLQTVNRKLTAMNRLLME----------------------------ENDRLQK 110

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y  +   N              LA  +   +  +  G+       L   
Sbjct: 111 QVSQL-VYENSYFRQQTQNA------------TLATTDTSCESVVTSGQQN-----LTPP 152

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 153 HPPKDASPAGLLSIAEETLAEFLSKAT-----------GTAVEWVQMPGMKPGPDSIGIV 201

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAM-TLEVLSTGVAGNY 385
                C   A+R   +V +    + EIL D   W + F     RA+  L VLSTG     
Sbjct: 202 AISHGCTGVAARACGLVGLEPTRVAEILKD---WPSWFRD--CRAVDVLNVLSTG----N 252

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------V 438
            G ++++  +   P+ L P R+ + +RY     +G+  V + SL+N +  P+       V
Sbjct: 253 GGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQNFV 312

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R    PSG LI+    G S +  V+H+++D   V  + + L  +      K  +A L   
Sbjct: 313 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLDPWSVPEVLRPLYKSSTLLAQKNTMAAL--- 369

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTG 557
             RL   ++  +    V   T    R + L+ L++++   F   V+  T   W+ L   G
Sbjct: 370 --RLLRQISQEVSQPNV---TGWGRRPAALRALSQKLSRGFNEAVNGFTDEGWSLLENDG 424

Query: 558 ADDVRVMTRKSVDD-------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENT 604
            DDV ++   S                P     ++ + A+     V P  +  FLR+   
Sbjct: 425 VDDVTLLVNMSHGKTMMGANISYSNGFPSMSNAVLCAKASMLLQNVTPAMLIRFLREH-- 482

Query: 605 RSEW-----DILS-------------------NGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           RSEW     D  S                    G V+  +A      +    V    V  
Sbjct: 483 RSEWADSSIDAYSAAAIKTGQCGLPGSHAGTFGGQVILPLAQTVEHEEFMEVVKFENVGH 542

Query: 641 LQSANSSQSNMLILQ-----ESCTDPTASFVIYAPVD---------------IVAMNVVL 680
            +       ++ +LQ     +  T  T++ +I+AP+D               I+ ++  +
Sbjct: 543 YRDDMLMPGDIFLLQLCNGVDENTVGTSAELIFAPIDASFSDDAPILPSGFRIIPLDSGM 602

Query: 681 NGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSV 740
           +   P+    L S   + P G    G   G++    S++T+AFQ + D      ++  + 
Sbjct: 603 DASSPNRTLDLASALDVGPAGNRASGDCAGQSGKSKSVMTIAFQFVFDVHLQDNVAAMAR 662

Query: 741 ATVNNLIACTVERIKASLS 759
             V ++IA +V+R+  +LS
Sbjct: 663 QYVRSIIA-SVQRVALALS 680


>gi|89514855|gb|ABD75302.1| class III homeodomain-leucine zipper protein C3HDZ1 [Psilotum
           nudum]
          Length = 827

 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 171/735 (23%), Positives = 279/735 (37%), Gaps = 155/735 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R++  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYSNEQVEALERLYNECPKPSALRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E  +L+T N KL A N    E                  +      L  EN  LR+
Sbjct: 75  -QRKEAARLQTVNGKLTAMNKLLMEEND--------------RLQKQVAQLLCENGYLRQ 119

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ +            VV   L   P P  P   A  + G                    
Sbjct: 120 QLPQGGLTTTDTSCDSVVTSGLQHLPTPQHPPHDAATHSG-------------------- 159

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
                     I+ LA  A+ E ++ A            GTA    +   ++  P   G  
Sbjct: 160 ----------ILSLAEEALAEFLQKAT-----------GTAIDWIQMPGMKPGPDSTGMI 198

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R  ++V +    +VEIL D   W             L  L +   GN N
Sbjct: 199 NISHGCTGVAARACSLVGLEPAKVVEILKDRPSWHW-------DCRQLTKLYSSNVGN-N 250

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++V+  +   P+ L P R+   +RY     +G++ + + SL+N    P        VR
Sbjct: 251 GTIEVLYMQMYAPTTLAPARDFCTLRYTSPLEDGSYVICERSLNNTHGPPTAPHMQSFVR 310

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               P G LI+      S +  V+H++++   V  + + L  +  A   K  +  L R  
Sbjct: 311 AEMLPCGYLIRPCEGSGSILIIVDHMDLESWTVPEVLRPLYESSAALAHKITIPAL-RYL 369

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD 559
             LA      IP    GV      R     L++R+   F   V+      WTT+   G D
Sbjct: 370 RHLAQAAGVEIP----GVRRPAAVR----SLSQRLARGFNDAVNGFGDDGWTTVPSDGTD 421

Query: 560 DVRVMTRKSVDD-------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW---- 608
           DV V  + + +             G++ + A+     VPP  +  FLR+   RSEW    
Sbjct: 422 DVTVAIKSNYNARELGDQFTSGTAGVLCAKASMLLQNVPPALLVRFLREH--RSEWADYG 479

Query: 609 --------------DILSNGG---VVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNM 651
                          IL   G   + Q +    +  +    + L+++   +  ++   ++
Sbjct: 480 AAANSTSALQINNFGILDTHGDVCISQVLQQPIHAVEDDEFLELIKLEGREEGSTLPRDI 539

Query: 652 LILQ-----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH- 705
            +LQ     E  T   ++ +++AP+DI           PD V LLPSGF  +P    L  
Sbjct: 540 FLLQLCSGLEENTAGASAQMVFAPIDISI---------PDDVPLLPSGFRAIPLDNCLLD 590

Query: 706 ----------------GANIGEAASGG-----SLLTVAFQILVDSVPTAKLSLGSVATVN 744
                           G+  G+ A+       S+LT+AFQ    S      +  S   V 
Sbjct: 591 AGSPSRTLDLASTLDVGSTNGKYANNAVFHLRSVLTLAFQFSFHSHMQESATTMSRQYVR 650

Query: 745 NLIACTVERIKASLS 759
           N+++ TV+R+  +L+
Sbjct: 651 NVVS-TVQRLAMALA 664


>gi|168004063|ref|XP_001754731.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693835|gb|EDQ80185.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 821

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 175/742 (23%), Positives = 288/742 (38%), Gaps = 159/742 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R +L +E      +EP Q+K WFQN+R + K  
Sbjct: 6   KYVRYTNEQVEALERVYHECPKPSSIRRHQLIKECPILANIEPKQIKVWFQNRRCREK-- 63

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E T+L + N KL A N    E                            EN RL  
Sbjct: 64  -QRKEATRLVSVNAKLTALNKLLME----------------------------ENERL-- 92

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
                    AK+  +  ++   L   +P+ P  +A  +      + GG       L    
Sbjct: 93  ---------AKHASQLTLDNHALRQQLPNLPAGVASTDTSCDSAVTGGL---PQHLTSQH 140

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
           S+P             A+   L+ MA+     ++    GTA    +   ++  P  IG  
Sbjct: 141 SSPD------------ASPAGLLSMAEETLTDFLAKATGTAVDWIQLPGMKPGPDAIGII 188

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +  ++   + EIL D   WS            +EVL T   GN  
Sbjct: 189 AISHGCVGIAARACGLAALDFSKVAEILKDRPGWS-------QDCRRMEVLGTLPTGN-G 240

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+   +RY     +G   + + SL      P        +R
Sbjct: 241 GTIELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLVICERSLTGKHNGPTMPPVQSFIR 300

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G   +  V+HVE +   V  + + L  +      K  +A L R  
Sbjct: 301 AEMFPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVLRPLYESPAVLAHKSTIAAL-RYL 359

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD 559
            R+A+       +GE+ +I N      +  L++R+   F   V+      W  +   G D
Sbjct: 360 RRIAAE-----ESGEI-IIRNGQHPAVIRTLSQRLTKGFNDAVNGFGDDGWVPMESDGMD 413

Query: 560 DVRVM---TRKSVDDP--------GRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
           DV VM   T KS++              GI+ + A+     VPP  +  FLR+   RSEW
Sbjct: 414 DVSVMLNATPKSMEGQIATDKLLFSLGGGILCAKASMLLQNVPPALLIRFLREH--RSEW 471

Query: 609 ---DILSNGGVVQEMA---HIANGR-----------DTGNCVSLLRVNCLQSANSSQSNM 651
              +I +N       A   H++ GR             G     L V  L+  ++ Q ++
Sbjct: 472 ADHEIDANAATAFRGASNGHVSRGRMSHVQLPLPLAQFGEQGEFLEVVKLEGHSAVQHSV 531

Query: 652 L----ILQESCTDPTASFV------IYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG 701
           L     L + C+      V      ++AP+D             + + LLPSGF ++P  
Sbjct: 532 LSRDSFLLQLCSGIEEGAVGAGAQLVFAPIDAAV---------SEDIPLLPSGFRVIPVD 582

Query: 702 TSLHGANI------------------GEAASGG------SLLTVAFQILVDSVPTAKLSL 737
           +S+ G  +                  GE+ S G      S+LT+AFQ   +       ++
Sbjct: 583 SSVDGIGLNRTLDLASTLEDHEAGLNGESKSNGSSSQVRSVLTIAFQFAYEVHTRETCAV 642

Query: 738 GSVATVNNLIACTVERIKASLS 759
            +   V  ++A +V+R+  +L+
Sbjct: 643 MARQYVRTVVA-SVQRVAMALA 663


>gi|357514651|ref|XP_003627614.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355521636|gb|AET02090.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 221

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 98/166 (59%), Gaps = 22/166 (13%)

Query: 517 VITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD-DPGRP 575
           +I   +GR S++KLA+RMV  FC  +                   RV  R + D D  +P
Sbjct: 67  LIQTLEGRNSVIKLADRMVKMFCESLVG----------------FRVSLRDTTDNDTSQP 110

Query: 576 PGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSL 635
            G V++AAT+ WLP+P ++VF+ L+D   RS+WD LS G  + E+AHI+NG   GNC+S+
Sbjct: 111 NGTVVTAATTLWLPLPAQKVFELLKDPTKRSQWDGLSCGNPMHEIAHISNGPYHGNCISI 170

Query: 636 LRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLN 681
           ++     S   +Q  M+ILQES T P  S++IYAP+D   ++V L+
Sbjct: 171 IK-----SFIPTQRQMVILQESFTSPVGSYIIYAPIDRKTVDVALS 211


>gi|302398629|gb|ADL36609.1| BZIP domain class transcription factor [Malus x domestica]
          Length = 841

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 156/738 (21%), Positives = 289/738 (39%), Gaps = 149/738 (20%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 20  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 77

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                            EN RL++
Sbjct: 78  -QRKEASRLQTVNRKLTAMNKLLME----------------------------ENDRLQK 108

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y  +   N              LA  +   +  +  G+ +  A   +  
Sbjct: 109 QVSQL-VYENTYFRQHTQNA------------TLATTDTSCESVVTSGQHHLTA---QQH 152

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 153 PPPRDASPAGLLSIAQETLAEFLSKA-----------TGTAVEWVQLPGMKPGPDSIGIV 201

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V ++   + EIL D   W            +++V +    GN  
Sbjct: 202 AISHGCTGVAARACGLVGLDPTRVAEILKDRPSW-------FRNCRSVDVANVMSTGN-G 253

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  V + SL+N +  P+       VR
Sbjct: 254 GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQNFVR 313

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L R  
Sbjct: 314 AEMLPSGYLIRPCEGGGSILHIVDHMDLEPWSVPEVLRPLYESSTILAQKTTMAAL-RNL 372

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            +++  ++     G         GR+  ++  L++R+   F   V+  T   W+ L   G
Sbjct: 373 RQISQEVSQPNSAGW--------GRRPAALRALSQRLSKGFNEAVNGFTDEGWSVLESDG 424

Query: 558 ADDVRVMTRKSVDD-----------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRS 606
            DDV ++   S              P     ++ + A+     VPP  +  FLR+   RS
Sbjct: 425 VDDVTLLVNSSPGKMMSANLYTDGVPSMSTAVLCAKASMLLQNVPPAILLRFLREH--RS 482

Query: 607 EW-----DILSNGG-------------------VVQEMAHIANGRDTGNCVSLLRVNCLQ 642
           EW     D  S                      V+  +AH     +    + +  +   +
Sbjct: 483 EWADRSIDAYSAAAVKAGPCNMLGPRVGSFGDNVILPLAHTIEHEEFMEVIKIENLGHYR 542

Query: 643 SANSSQSNMLILQESCTDP------TASFVIYAPVD---------------IVAMNVVLN 681
                 +  + L + C+        T S +++AP+D               I+ ++  ++
Sbjct: 543 EDMIMPAADIFLLQLCSGVDENAVGTCSELVFAPIDASFSDDAPILPSGFRIIPLDSRMD 602

Query: 682 GGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVA 741
              P+    L S   + P G+   G N G + +  S++T+AFQ   +      ++  +  
Sbjct: 603 TPSPNRTLDLASALEVGPAGSRASGDNAGHSGNTKSVMTIAFQFAFEIHLQENVASMARQ 662

Query: 742 TVNNLIACTVERIKASLS 759
            V ++IA +V+R+  +LS
Sbjct: 663 YVRSIIA-SVQRVALALS 679


>gi|110349524|gb|ABG73237.1| class III HD-Zip protein HB12 [Physcomitrella patens]
          Length = 844

 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 177/760 (23%), Positives = 293/760 (38%), Gaps = 163/760 (21%)

Query: 83  DQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWF 138
           D+ +  +   +Y R+T  Q++ +E  + ECP P   +R +L +E      +EP Q+K WF
Sbjct: 7   DKYKGMDSSGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKECPILANIEPKQIKVWF 66

Query: 139 QNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHH 198
           QN+R + K   +R E T+L + N KL A N    E                         
Sbjct: 67  QNRRCREK---QRKEATRLVSVNAKLTALNKLLME------------------------- 98

Query: 199 LRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEM 258
              EN RL           AK+  +  ++   L   +P+ P+         Q G+   + 
Sbjct: 99  ---ENERL-----------AKHASQLTLDNHALRQQLPNLPVPDGKCRLSGQAGVASTDT 144

Query: 259 Y-------GAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAV 311
                   G    L S  +  +A    ++ +A   + + +  A            GTA  
Sbjct: 145 SCDSAVTGGLPQHLTSQHSSPDASPAGLLSMAEETLTDFLAKAT-----------GTAVD 193

Query: 312 LNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVS 369
             +   ++  P  IG       C   A+R   +  ++   + EIL D   WS        
Sbjct: 194 WIQLPGMKPGPDAIGIIAISHGCVGIAARACGLAALDFSKVAEILKDRPGWS-------Q 246

Query: 370 RAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL 429
               +EVL T   GN  G ++++  +   P+ L P R+   +RY     +G   + + SL
Sbjct: 247 DCRRMEVLGTLPTGN-GGTIELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLVICERSL 305

Query: 430 DNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVST 482
                 P        +R    PSG LI+    G   +  V+HVE +   V  + + L  +
Sbjct: 306 TGKHNGPTMPPVQSFIRAEMFPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVLRPLYES 365

Query: 483 GNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGV 542
                 K  +A L R   R+A+       +GE+ +I N      +  L++R+   F   V
Sbjct: 366 PAVLAHKSTIAAL-RYLRRIAAE-----ESGEI-IIRNGQHPAVIRTLSQRLTKGFNDAV 418

Query: 543 SASTAHTWTTLSGTGADDVRVM---TRKSVDDP--------GRPPGIVLSAATSFWLPVP 591
           +      W  +   G DDV VM   T KS++              GI+ + A+     VP
Sbjct: 419 NGFGDDGWVPMESDGMDDVSVMLNATPKSMEGQIATDKLLFSLGGGILCAKASMLLQNVP 478

Query: 592 PKRVFDFLRDENTRSEW---DILSNGGVVQEMA---HIANGR-----------DTGNCVS 634
           P  +  FLR+   RSEW   +I +N       A   H++ GR             G    
Sbjct: 479 PALLIRFLREH--RSEWADHEIDANAATAFRGASNGHVSRGRMSHVQLPLPLAQFGEQGE 536

Query: 635 LLRVNCLQSANSSQSNML----ILQESCTDPTASFV------IYAPVDIVAMNVVLNGGD 684
            L V  L+  ++ Q ++L     L + C+      V      ++AP+D            
Sbjct: 537 FLEVVKLEGHSAVQHSVLSRDSFLLQLCSGIEEGAVGAGAQLVFAPIDAAV--------- 587

Query: 685 PDYVALLPSGFAILP------DGTSL------------HGANI-GEAASGG------SLL 719
            + + LLPSGF ++P      DG  L            H A + GE+ S G      S+L
Sbjct: 588 SEDIPLLPSGFRVIPVDSSVVDGIGLNRTLDLASTLEDHEAGLNGESKSNGSSSQVRSVL 647

Query: 720 TVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           T+AFQ   +       ++ +   V  ++A +V+R+  +L+
Sbjct: 648 TIAFQFAYEVHTRETCAVMARQYVRTVVA-SVQRVAMALA 686


>gi|90110438|gb|ABD90521.1| class III homeodomain-leucine zipper [Physcomitrella patens]
          Length = 737

 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 176/750 (23%), Positives = 289/750 (38%), Gaps = 163/750 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R +L +E      +EP Q+K WFQN+R + K  
Sbjct: 6   KYVRYTNEQVEALERVYHECPKPSSIRRHQLIKECPILANIEPKQIKVWFQNRRCREK-- 63

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E T+L + N KL A N    E                            EN RL  
Sbjct: 64  -QRKEATRLVSVNAKLTALNKLLME----------------------------ENERL-- 92

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMY-------GA 261
                    AK+  +  ++   L   +P+ P+         Q G+   +         G 
Sbjct: 93  ---------AKHASQLTLDNHALRQQLPNLPVPDGKCRLSGQAGVASTDTSCDSAVTGGL 143

Query: 262 ADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF 321
              L S  +  +A    ++ +A   + + +  A            GTA    +   ++  
Sbjct: 144 PQHLTSQHSSPDASPAGLLSMAEETLTDFLAKAT-----------GTAVDWIQLPGMKPG 192

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C   A+R   +  ++   + EIL D   WS            +EVL T
Sbjct: 193 PDAIGIIAISHGCVGIAARACGLAALDFSKVAEILKDRPGWS-------QDCRRMEVLGT 245

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-- 437
              GN  G ++++  +   P+ L P R+   +RY     +G   + + SL      P   
Sbjct: 246 LPTGN-GGTIELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLVICERSLTGKHNGPTMP 304

Query: 438 -----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                +R    PSG LI+    G   +  V+HVE +   V  + + L  +      K  +
Sbjct: 305 PVQSFIRAEMFPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVLRPLYESPAVLAHKSTI 364

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTT 552
           A L R   R+A+       +GE+ +I N      +  L++R+   F   V+      W  
Sbjct: 365 AAL-RYLRRIAAE-----ESGEI-IIRNGQHPAVIRTLSQRLTKGFNDAVNGFGDDGWVP 417

Query: 553 LSGTGADDVRVM---TRKSVDDP--------GRPPGIVLSAATSFWLPVPPKRVFDFLRD 601
           +   G DDV VM   T KS++              GI+ + A+     VPP  +  FLR+
Sbjct: 418 MESDGMDDVSVMLNATPKSMEGQIATDKLLFSLGGGILCAKASMLLQNVPPALLIRFLRE 477

Query: 602 ENTRSEW---DILSNGGVVQEMA---HIANGR-----------DTGNCVSLLRVNCLQSA 644
              RSEW   +I +N       A   H++ GR             G     L V  L+  
Sbjct: 478 H--RSEWADHEIDANAATAFRGASNGHVSRGRMSHVQLPLPLAQFGEQGEFLEVVKLEGH 535

Query: 645 NSSQSNML----ILQESCTDPTASFV------IYAPVDIVAMNVVLNGGDPDYVALLPSG 694
           ++ Q ++L     L + C+      V      ++AP+D             + + LLPSG
Sbjct: 536 SAVQHSVLSRDSFLLQLCSGIEEGAVGAGAQLVFAPIDAAV---------SEDIPLLPSG 586

Query: 695 FAILP------DGTSL------------HGANI-GEAASGG------SLLTVAFQILVDS 729
           F ++P      DG  L            H A + GE+ S G      S+LT+AFQ   + 
Sbjct: 587 FRVIPVDSSVVDGIGLNRTLDLASTLEDHEAGLNGESKSNGSSSQVRSVLTIAFQFAYEV 646

Query: 730 VPTAKLSLGSVATVNNLIACTVERIKASLS 759
                 ++ +   V  ++A +V+R+  +L+
Sbjct: 647 HTRETCAVMARQYVRTVVA-SVQRVAMALA 675


>gi|89514865|gb|ABD75307.1| class III homeodomain-leucine zipper protein C3HDZ2 [Ginkgo biloba]
          Length = 843

 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 159/740 (21%), Positives = 295/740 (39%), Gaps = 150/740 (20%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTAEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                            EN RL++
Sbjct: 75  -QRKEASRLQTVNRKLTAMNKLLME----------------------------ENDRLQK 105

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y  + + N              +A  +   +  +  G+ +   + L + 
Sbjct: 106 QVSQL-VYENGYFRQQLQNA------------SIATTDTSCESVVTSGQ-HQQQNHLTAR 151

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 152 HPPRDASPAGLLSIAEETLTEFLSKAT-----------GTAVEWIQMPGMKPGPDSIGIV 200

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W             ++VL+    GN  
Sbjct: 201 AISHGCTGVAARACGLVGIEPTKVAEILKDRPSW-------FRDCRCVDVLTAFSTGN-G 252

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L   R+ + +RY     +G+  V + SL   +  P+       VR
Sbjct: 253 GTVELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLVVCERSLSGTQGGPSMPPVQHFVR 312

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L R  
Sbjct: 313 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTMAAL-RHL 371

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            ++A  ++ ++  G         GR+  ++   ++R+   F   V+  T   W+ +   G
Sbjct: 372 RQIAQEVSCDVVLGW--------GRQPAALRTFSQRLGKGFNEAVNGFTDDGWSLMGNDG 423

Query: 558 ADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            DDV ++   S +             P    GI+ + A+     VPP  +  FLR+   R
Sbjct: 424 TDDVTILINSSPNKILGSQLASSEGFPALGGGILCAKASMLLQNVPPALLVRFLREH--R 481

Query: 606 SEW-----DILS--------------------NGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           SEW     D  S                     G V+  +AH     +    + L   N 
Sbjct: 482 SEWADSNIDAYSAAALKASPCSVPSSRIGGFGGGQVILPLAHTVEHEEFLEVIKL-EGNG 540

Query: 641 LQSANSSQSNMLILQESCT--DPTA----SFVIYAPVD---------------IVAMNVV 679
           L    +  S  + L + C+  D  A    + +++AP+D               ++ ++  
Sbjct: 541 LTQEEALLSREMFLLQLCSGVDENAVGACAELVFAPIDASFADNAPLLPSGFRVIPLDSG 600

Query: 680 LNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGS 739
           ++G  P+    L S   I P GT + G   G + +  S+LT+AFQ   ++     ++  +
Sbjct: 601 VDGSSPNRTLDLASALEIGPAGTRVSGDYGGNSGNLRSVLTIAFQFTYENHLRENVASMA 660

Query: 740 VATVNNLIACTVERIKASLS 759
              V +++A +V+R+  +L+
Sbjct: 661 RQYVRSVVA-SVQRVAMALA 679


>gi|89953822|gb|ABD75297.1| class III homeodomain-leucine zipper protein C3HDZ1 [Physcomitrella
           patens]
          Length = 833

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 176/750 (23%), Positives = 289/750 (38%), Gaps = 163/750 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R +L +E      +EP Q+K WFQN+R + K  
Sbjct: 6   KYVRYTNEQVEALERVYHECPKPSSIRRHQLIKECPILANIEPKQIKVWFQNRRCREK-- 63

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E T+L + N KL A N    E                            EN RL  
Sbjct: 64  -QRKEATRLVSVNAKLTALNKLLME----------------------------ENERL-- 92

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMY-------GA 261
                    AK+  +  ++   L   +P+ P+         Q G+   +         G 
Sbjct: 93  ---------AKHASQLTLDNHALRQQLPNLPVPDGKCRLSGQAGVASTDTSCDSAVTGGL 143

Query: 262 ADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF 321
              L S  +  +A    ++ +A   + + +  A            GTA    +   ++  
Sbjct: 144 PQHLTSQHSSPDASPAGLLSMAEETLTDFLAKAT-----------GTAVDWIQLPGMKPG 192

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C   A+R   +  ++   + EIL D   WS            +EVL T
Sbjct: 193 PDAIGIIAISHGCVGIAARACGLAALDFSKVAEILKDRPGWS-------QDCRRMEVLGT 245

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-- 437
              GN  G ++++  +   P+ L P R+   +RY     +G   + + SL      P   
Sbjct: 246 LPTGN-GGTIELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLVICERSLTGKHNGPTMP 304

Query: 438 -----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                +R    PSG LI+    G   +  V+HVE +   V  + + L  +      K  +
Sbjct: 305 PVQSFIRAEMFPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVLRPLYESPAVLAHKSTI 364

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTT 552
           A L R   R+A+       +GE+ +I N      +  L++R+   F   V+      W  
Sbjct: 365 AAL-RYLRRIAAE-----ESGEI-IIRNGQHPAVIRTLSQRLTKGFNDAVNGFGDDGWVP 417

Query: 553 LSGTGADDVRVM---TRKSVDDP--------GRPPGIVLSAATSFWLPVPPKRVFDFLRD 601
           +   G DDV VM   T KS++              GI+ + A+     VPP  +  FLR+
Sbjct: 418 MESDGMDDVSVMLNATPKSMEGQIATDKLLFSLGGGILCAKASMLLQNVPPALLIRFLRE 477

Query: 602 ENTRSEW---DILSNGGVVQEMA---HIANGR-----------DTGNCVSLLRVNCLQSA 644
              RSEW   +I +N       A   H++ GR             G     L V  L+  
Sbjct: 478 H--RSEWADHEIDANAATAFRGASNGHVSRGRMSHVQLPLPLAQFGEQGEFLEVVKLEGH 535

Query: 645 NSSQSNML----ILQESCTDPTASFV------IYAPVDIVAMNVVLNGGDPDYVALLPSG 694
           ++ Q ++L     L + C+      V      ++AP+D             + + LLPSG
Sbjct: 536 SAVQHSVLSRDSFLLQLCSGIEEGAVGAGAQLVFAPIDAAV---------SEDIPLLPSG 586

Query: 695 FAILP------DGTSL------------HGANI-GEAASGG------SLLTVAFQILVDS 729
           F ++P      DG  L            H A + GE+ S G      S+LT+AFQ   + 
Sbjct: 587 FRVIPVDSSVVDGIGLNRTLDLASTLEDHEAGLNGESKSNGSSSQVRSVLTIAFQFAYEV 646

Query: 730 VPTAKLSLGSVATVNNLIACTVERIKASLS 759
                 ++ +   V  ++A +V+R+  +L+
Sbjct: 647 HTRETCAVMARQYVRTVVA-SVQRVAMALA 675


>gi|7209912|dbj|BAA92366.1| homeobox protein PpHB10 [Physcomitrella patens]
          Length = 880

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 189/774 (24%), Positives = 312/774 (40%), Gaps = 161/774 (20%)

Query: 84  QEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQVKFWFQ 139
           ++Q  +   +Y R+TQ Q++ +E  + ECP P   +R +L +E      +EP Q+K WFQ
Sbjct: 6   KDQTMDASGKYVRYTQEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQ 65

Query: 140 NKRTQMKTQHERHENTQLRTENEKLRADN---MRYREALSNASCPNCGGPTAIGEMSFDE 196
           N+R + K   +R E T+L + N KL A N   M   E L+  +                 
Sbjct: 66  NRRCREK---QRKEATRLVSVNAKLTALNKLLMEENERLAKHT----------------- 105

Query: 197 HHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPG---- 252
             L LEN  LR++I             P + +P     +PS+ L+  +   GA  G    
Sbjct: 106 SQLTLENHALRQQI-------------PNLPFPDGRHRLPSQILQSPLKKEGAVNGGDES 152

Query: 253 -IGGG---EMYGAADLLRSISAPTEADKPMIIELAVAAMEE----------LIRMAQMGE 298
              GG   +++G A +    S  T  D  +   L      +          L+  A+   
Sbjct: 153 STQGGICVKVHGQAGI---ASTDTSCDSAVTGGLPHRLTPQHSPRDSSPAGLLATAEETL 209

Query: 299 PLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMD 356
             ++    GTA    +   ++  P  IG       C   A+R   +V ++   + E+L D
Sbjct: 210 TEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACGLVALDISKVTEVLKD 269

Query: 357 VNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQ 416
             +W       +     +E+L     GN  G ++++  +   P+ L P R+   +RY   
Sbjct: 270 RPRW-------LQDCRRMEILGALPTGN-GGTIELLYTQMYAPTTLAPARDYCTLRYTTI 321

Query: 417 HGEGTWAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 469
             +G   + + SL  ++  P        VR    PSG LI+    G   +  V+H   + 
Sbjct: 322 LEDGNVVICERSLSGVQGGPTMPPVQSFVRGEMYPSGYLIRPCDGGGCIIHVVDHYNNEP 381

Query: 470 RGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK 529
           R V  + + L  +      K  +A L R   RLA+       +GE GV  N      +  
Sbjct: 382 RSVPEVLRPLYESPAVLSQKSTLAAL-RHLRRLAAE-----ESGE-GVPRNGQHPAVLRT 434

Query: 530 LAERMVISFCAGVSASTAHTWTTLSGTGADDVRVM---TRKSVDDP--------GRPPGI 578
           L +R+   F   V+      W      G DDV VM   T KS++              GI
Sbjct: 435 LCQRLTKGFNNAVNGFPDDGWEATISDGLDDVSVMLNATPKSMEGQIASDKLLYSLGGGI 494

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSEW---DILSN---------------GGV--VQ 618
           + + A+     VPP  +  FLR+   RSEW   DI +N               GGV  VQ
Sbjct: 495 LCAKASMLLQNVPPSLLIRFLREH--RSEWADYDIDANVASFRSNGNGYVPRCGGVSHVQ 552

Query: 619 EMAHIANGRDTGNCVSLLRV---NCLQSANSSQSNMLILQESCTDPTA----SFVIYAPV 671
               +A   ++G  + +++V   + +Q    S+   L+   S  D +A    + +++APV
Sbjct: 553 LPLPLAYSGESGEILEVVKVEGHSSVQHMVLSRDTFLLQLCSGVDESAVGACAQLVFAPV 612

Query: 672 DIVAMNVVLNGGDPDYVALLPSGFAILP------DG----------TSLHGANI----GE 711
           D+            D + LLP GF + P      DG          ++L G N     G+
Sbjct: 613 DVALA---------DDIPLLPPGFCVSPIDTNVVDGFGLDRTLDLASTLEGGNDLRSNGD 663

Query: 712 AASGG------SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           A S        S+LT+AFQ   +      ++  +   V N++A +V+++  +L+
Sbjct: 664 AKSSNSPGQMRSVLTIAFQFAYEVHTRETVAAMARQYVRNVVA-SVQQVAMALA 716


>gi|90110446|gb|ABD90525.1| class III homeodomain-leucine zipper [Psilotum nudum]
          Length = 829

 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 170/735 (23%), Positives = 278/735 (37%), Gaps = 155/735 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R++  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYSNEQVEALERLYNECPKPSALRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E  +L+T N KL A N    E                  +      L  EN  LR+
Sbjct: 75  -QRKEAARLQTVNGKLTAMNKLLMEEND--------------RLQKQVAQLLRENGYLRQ 119

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ +            VV   L   P P  P   A  + G                    
Sbjct: 120 QLPQGGLTTTDTSCDSVVTSGLQHLPTPQHPPHDAATHSG-------------------- 159

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
                     I+ LA  A+ E ++ A            GTA    +   ++  P   G  
Sbjct: 160 ----------ILSLAEEALAEFLQKAT-----------GTAIDWIQMPGMKPGPDSTGMI 198

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R  ++V +    +VEIL     W             L  L +   GN N
Sbjct: 199 NISHGCTGVAARACSLVGLEPAKVVEILKGRPSWHW-------DCRQLTKLYSSNVGN-N 250

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++V+  +   P+ L P R+   +RY     +G++ + + SL+N    P        VR
Sbjct: 251 GTIEVLYMQMYAPTTLAPARDFCTLRYTSPLEDGSYVICERSLNNTHGPPTAPHMQSFVR 310

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               P G LI+      S +  V+H++++   V  + + L  +  A   K  +  L R  
Sbjct: 311 AEMLPCGYLIRPCEGSGSILIIVDHMDLESWTVPEVLRPLYESSAALAHKITIPAL-RYL 369

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD 559
             LA      IP    GV      R     L++R+   F   V+      WTT+   G D
Sbjct: 370 RHLAQAAGVEIP----GVRRPAAVR----SLSQRLARGFNDAVNGFGDDGWTTVPSDGTD 421

Query: 560 DVRVMTRKSVDD-------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW---- 608
           DV V  + + +             G++ + A+     VPP  +  FLR+   RSEW    
Sbjct: 422 DVTVAIKSNYNARELGDQFTSGTAGVLCAKASMLLQNVPPALLVRFLREH--RSEWADYG 479

Query: 609 --------------DILSNGG---VVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNM 651
                          IL   G   + Q +    +  +    + L+++   +  ++   ++
Sbjct: 480 AAANSTSALQINNFGILDTHGDVCISQVLQQPIHAVEDDEFLELIKLEGREEGSTLPRDI 539

Query: 652 LILQ-----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH- 705
            +LQ     E  T   ++ +++AP+DI           PD V LLPSGF  +P    L  
Sbjct: 540 FLLQLCSGLEENTAGASAQMVFAPIDISI---------PDDVPLLPSGFRAIPLDNCLLD 590

Query: 706 ----------------GANIGEAASGG-----SLLTVAFQILVDSVPTAKLSLGSVATVN 744
                           G+  G+ A+       S+LT+AFQ    S      +  S   V 
Sbjct: 591 AGSPSRTLDLASTLDVGSTNGKYANNAVFHLRSVLTLAFQFSFHSHMQESATTMSRQYVR 650

Query: 745 NLIACTVERIKASLS 759
           N+++ TV+R+  +L+
Sbjct: 651 NVVS-TVQRLAMALA 664


>gi|89514875|gb|ABD75312.1| class III homeodomain-leucine zipper protein C3HDZ2 [Taxus globosa]
          Length = 843

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 157/739 (21%), Positives = 296/739 (40%), Gaps = 148/739 (20%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  +++CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTAEQVEALERLYRDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                            EN RL++
Sbjct: 75  -QRKEASRLQTVNRKLTAMNKLLME----------------------------ENDRLQK 105

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y  + + N  + +             N   +  +  G+ +   + L   
Sbjct: 106 QVSQL-VYENGYFRQQLQNASIAT-----------TDNNSCESVVTSGQ-HQQQNHLTPR 152

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 153 QPPRDASPAGLLSIAEETLTEFLSKAT-----------GTAVEWIQMPGMKPGPDAIGIV 201

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W            +++VL+    GN  
Sbjct: 202 AISHGCTGVAARACGLVGLEPTKVAEILKDRPSW-------FRDCRSVDVLTAFSTGN-G 253

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN-----LRPSP-AVRC 440
           G ++++  +   P+ L P R+   +RY     +G+  V + SL +     + P P  VR 
Sbjct: 254 GTVEILYMQMYAPTTLAPARDFCTLRYTSVMEDGSLVVCERSLSDKGSPSMPPVPHFVRA 313

Query: 441 RRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCE 500
              PSG LI+    G S +  V+H++++   V  + + L  +      +  +A L R+  
Sbjct: 314 EMFPSGYLIRPCEGGSSIIHIVDHMDLEPWSVPEVLRPLYESSAVLAQRTTMAAL-RRLR 372

Query: 501 RLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTGA 558
           ++A  +++++  G         GR+  ++   ++R+   F   ++  T   W+ +   G 
Sbjct: 373 QVAQEVSSDMVLGW--------GRQPAALRMFSQRLCKGFNEAINGFTDDGWSLMGSDGM 424

Query: 559 DDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRS 606
           DDV ++   S               P    GI+ + A+     VPP  +  FLR+   RS
Sbjct: 425 DDVTILINSSPSKLLGSQLASTDGLPAFGGGILCAKASMLLQNVPPSLLVRFLREH--RS 482

Query: 607 EW-----DILS--------------------NGGVVQEMAHIANGRDTGNCVSLLRVNCL 641
           EW     D  S                     G V+  +AH     +    +  L  N L
Sbjct: 483 EWADSNIDAYSAAALKASPCAVPTSRIGGFGGGQVILPLAHTVEHEEFLEVIK-LECNGL 541

Query: 642 QSANSSQSNMLILQESCT--DPTA----SFVIYAPVD---------------IVAMNVVL 680
               +  S  + L + C+  D  A    + +++AP+D               ++ ++  +
Sbjct: 542 TQEEALLSRDMFLLQLCSGIDENAVGACAELVFAPIDASLTDSAPLLPSGFRVIPLDSGI 601

Query: 681 NGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSV 740
           +   P+    L S   + P G    G   G +++  S+LT+AFQ   ++     ++  + 
Sbjct: 602 DSSSPNRTLDLASALDVGPTGNRPAGDYGGNSSNIRSVLTIAFQFTYENHLRENVASMAR 661

Query: 741 ATVNNLIACTVERIKASLS 759
             V N++A +V+R+  +L+
Sbjct: 662 QYVRNVVA-SVQRVAMALA 679


>gi|15233969|ref|NP_195014.1| homeobox-leucine zipper protein ATHB-8 [Arabidopsis thaliana]
 gi|75220729|sp|Q39123.1|ATHB8_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-8; AltName:
           Full=HD-ZIP protein ATHB-8; AltName: Full=Homeodomain
           transcription factor ATHB-8
 gi|1149569|emb|CAA90703.1| HD-zip [Arabidopsis thaliana]
 gi|7270235|emb|CAB80005.1| HD-zip transcription factor (athb-8) [Arabidopsis thaliana]
 gi|20152536|emb|CAD29660.1| homeodomain-leucine zipper protein 8 [Arabidopsis thaliana]
 gi|20466330|gb|AAM20482.1| HD-zip transcription factor (athb-8) [Arabidopsis thaliana]
 gi|31711762|gb|AAP68237.1| At4g32880 [Arabidopsis thaliana]
 gi|332660738|gb|AEE86138.1| homeobox-leucine zipper protein ATHB-8 [Arabidopsis thaliana]
          Length = 833

 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 163/750 (21%), Positives = 289/750 (38%), Gaps = 176/750 (23%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 15  KYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 72

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A N    E                            EN RL++
Sbjct: 73  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 103

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++  +    + +   P                 LA  +   +  +  G+ +     L   
Sbjct: 104 QVSHLVYENSYFRQHP------------QNQGNLATTDTSCESVVTSGQHH-----LTPQ 146

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E I  A            GTA    +   ++  P  IG  
Sbjct: 147 HQPRDASPAGLLSIADETLTEFISKAT-----------GTAVEWVQMPGMKPGPDSIGIV 195

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V ++   + EIL D   W       +    +L++++     N  
Sbjct: 196 AISHGCTGIAARACGLVGLDPTRVAEILKDKPCW-------LRDCRSLDIVNVLSTAN-G 247

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN------LRPSPA-VR 439
           G L+++  +   P+ L P R+ + +RY     +G+  + + SL+N      + PSP  VR
Sbjct: 248 GTLELIYMQLYAPTTLAPARDFWMLRYTSVMEDGSLVICERSLNNTQNGPSMPPSPHFVR 307

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H +++   V  + + L  +      +  +A L R  
Sbjct: 308 AEILPSGYLIRPCEGGGSILHIVDHFDLEPWSVPEVLRSLYESSTLLAQRTTMAAL-RYL 366

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            +++  ++    TG         GR+  ++  L++R+   F   V+  +   W+ L   G
Sbjct: 367 RQISQEISQPNVTGW--------GRRPAALRALSQRLSKGFNEAVNGFSDEGWSILESDG 418

Query: 558 ADDVRVMTRKS------------VDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENT 604
            DDV ++   S             +     P  VL A  S  L  VPP  +  FLR+   
Sbjct: 419 IDDVTLLVNSSPTKMMMTSSLPFANGYTSMPSAVLCAKASMLLQNVPPSILLRFLREH-- 476

Query: 605 RSEW-----DILS-------------------NGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           R EW     D  S                    G V+  +AH     +    + L  +  
Sbjct: 477 RQEWADNSIDAYSAAAIKAGPCSLPIPRPGSFGGQVILPLAHTIENEEFMEVIKLESLGH 536

Query: 641 LQSANSSQSNMLILQ----------ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVAL 690
            Q      +++ +LQ          ESC +     +I+AP+D             D   +
Sbjct: 537 YQEDMMMPADIFLLQMCSGVDENAVESCAE-----LIFAPID---------ASFSDDAPI 582

Query: 691 LPSGFAILP---------------------DGTSLHGANIGEAASGGSLLTVAFQILVDS 729
           +PSGF I+P                      G+   G + G   +  S++T+AFQ+  + 
Sbjct: 583 IPSGFRIIPLDSKSEGLSPNRTLDLASALDVGSRTAGDSCGSRGNSKSVMTIAFQLAFEM 642

Query: 730 VPTAKLSLGSVATVNNLIACTVERIKASLS 759
                ++  +   V ++IA +V+R+  +LS
Sbjct: 643 HMQENVASMARQYVRSVIA-SVQRVALALS 671


>gi|297798676|ref|XP_002867222.1| ATHB-8 [Arabidopsis lyrata subsp. lyrata]
 gi|297313058|gb|EFH43481.1| ATHB-8 [Arabidopsis lyrata subsp. lyrata]
          Length = 832

 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 163/750 (21%), Positives = 289/750 (38%), Gaps = 176/750 (23%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 14  KYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 71

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A N    E                            EN RL++
Sbjct: 72  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 102

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++  +    + +   P                 LA  +   +  +  G+ +     L   
Sbjct: 103 QVSHLVYENSYFRQHP------------QNQGNLATTDNSCESVVTSGQHH-----LTPQ 145

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E I  A            GTA    +   ++  P  IG  
Sbjct: 146 HQPRDASPAGLLSIADETLTEFISKAT-----------GTAVEWVQMPGMKPGPDSIGIV 194

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V ++   + EIL D   W       +    +L++++     N  
Sbjct: 195 AISHGCTGIAARACGLVGLDPTRVAEILKDKPCW-------LRDCRSLDIVNVLSTAN-G 246

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN------LRPSPA-VR 439
           G L+++  +   P+ L P R+ + +RY     +G+  + + SL+N      + PSP  VR
Sbjct: 247 GTLELIYMQLYAPTTLAPARDFWMLRYTSVMEDGSLVICERSLNNTQNGPSMPPSPHFVR 306

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H +++   V  + + L  +      +  +A L R  
Sbjct: 307 AEILPSGYLIRPCEGGGSILHIVDHFDLEPWSVPEVLRSLYESSTLLAQRTTMAAL-RYL 365

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            +++  ++    TG         GR+  ++  L++R+   F   V+  +   W+ L   G
Sbjct: 366 RQISQEISQPNVTGW--------GRRPAALRALSQRLSKGFNEAVNGFSDEGWSILESDG 417

Query: 558 ADDVRVMTRKS------------VDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENT 604
            DDV ++   S             +     P  VL A  S  L  VPP  +  FLR+   
Sbjct: 418 IDDVTLLVNSSPTKMMMTSSLPFANGFTSMPSAVLCAKASMLLQNVPPSILLRFLREH-- 475

Query: 605 RSEW-----DILS-------------------NGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           R EW     D  S                    G V+  +AH     +    + L  +  
Sbjct: 476 RQEWADNSIDAYSAAAIKAGPCSLPIPRPGSFGGQVILPLAHTIENEEFMEVIKLESLGH 535

Query: 641 LQSANSSQSNMLILQ----------ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVAL 690
            Q      +++ +LQ          ESC +     +I+AP+D             D   +
Sbjct: 536 YQEDMMMPADIFLLQMCSGVDENAVESCAE-----LIFAPID---------ASFSDDAPI 581

Query: 691 LPSGFAILP---------------------DGTSLHGANIGEAASGGSLLTVAFQILVDS 729
           +PSGF I+P                      G+   G + G   +  S++T+AFQ+  + 
Sbjct: 582 IPSGFRIIPLDSKSEGLSPNRTLDLASALDVGSRTAGDSCGSRGNSKSVMTIAFQLAFEM 641

Query: 730 VPTAKLSLGSVATVNNLIACTVERIKASLS 759
                ++  +   V ++IA +V+R+  +LS
Sbjct: 642 HMQENVASMARQYVRSVIA-SVQRVALALS 670


>gi|225442505|ref|XP_002284009.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like isoform 2
           [Vitis vinifera]
          Length = 832

 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 166/753 (22%), Positives = 291/753 (38%), Gaps = 175/753 (23%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 5   KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 62

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A N    E                            EN RL++
Sbjct: 63  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 93

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y  +   N              LA  +   +  +  G+ +     L   
Sbjct: 94  QVSQL-VYENGYFRQHTQNT------------TLATKDTSCESVVTSGQHH-----LTPQ 135

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 136 HPPRDASPAGLLSIAEETLTEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGIV 184

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W             ++VL+     N  
Sbjct: 185 AISHGCTGVAARACGLVGLEPTRVAEILKDRPSW-------FRDCRAVDVLNVLPTAN-G 236

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  V + SL N +  P+       VR
Sbjct: 237 GTIELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSMPPVQHFVR 296

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L RQ 
Sbjct: 297 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQL 355

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            ++A  ++ +  TG         GR+  ++  L++R+   F   ++  T   W+ +   G
Sbjct: 356 RQIAQEVSQSNVTGW--------GRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDG 407

Query: 558 ADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            DDV ++   S +             P     ++ + A+     VPP  +  FLR+   R
Sbjct: 408 IDDVTILVNSSPEKLTGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--R 465

Query: 606 SEW-----DILSNGG-------------------VVQEMAHIANGRDTGNCVSLLRV--- 638
           SEW     D  S                      V+  +AH     +  N    L V   
Sbjct: 466 SEWADNNIDAYSAAAVKVGPCSLPGSRVGSFGSQVILPLAHTIEHEEASNLFIFLEVIKL 525

Query: 639 ----NCLQSANSSQSNMLILQESCTDP----TASFVIYAPVDIVAMNVVLNGGDPDYVAL 690
               +C + A   +   L+   S  D     T + +I+AP+D             D   L
Sbjct: 526 EGVGHCPEDAMMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPL 576

Query: 691 LPSGFAILPDGTSLHGAN------------IGEA---------ASGG---SLLTVAFQIL 726
           LPSGF I+P  +    ++            IG A          +GG   S++T+AF+  
Sbjct: 577 LPSGFRIIPLDSGKEASSPNRTLDLASALEIGPAGNRSSNDYSVNGGNTRSVMTIAFEFA 636

Query: 727 VDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
            +S     ++  +   V ++I+ +V+R+  +LS
Sbjct: 637 FESHLQENVASMARQYVRSIIS-SVQRVALALS 668


>gi|110349542|gb|ABG73246.1| class III HD-Zip protein HDZ32 [Pinus taeda]
          Length = 844

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 160/762 (20%), Positives = 298/762 (39%), Gaps = 168/762 (22%)

Query: 80  SGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVK 135
           SG + +     + +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K
Sbjct: 5   SGKEGKSSSMDQGKYVRYTAEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIK 64

Query: 136 FWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFD 195
            WFQN+R + K   +R E ++L+  N KL A N    E                      
Sbjct: 65  VWFQNRRCREK---QRKEASRLQAVNRKLSAMNKLLME---------------------- 99

Query: 196 EHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGG 255
                 EN RL++++ ++      Y  + + N  + +       +  +V           
Sbjct: 100 ------ENDRLQKQVSQL-VYENGYFRQQLQNASIATTDTSCESVVTSVK---------- 142

Query: 256 GEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNED 315
              +   + L     P +A    ++ +A   + E +  A+     W+  + G        
Sbjct: 143 ---HQQQNHLTPRDPPRDASPAGLLSIAEETLTEFLSKAKGNAVEWI-QMPG-------- 190

Query: 316 EYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMT 373
             ++  P  IG       C   A+R  ++V ++   + EIL D   W       +    +
Sbjct: 191 --MKPGPDAIGIVTISHGCTGVAARACSLVGIDPTKVAEILKDRTSW-------LRDCRS 241

Query: 374 LEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR 433
           ++VL+    GN  G ++++  +   P+ L   R+ + +RY     +G+  V + SL   +
Sbjct: 242 VDVLTAFSTGN-GGTIELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLVVCERSLSGTQ 300

Query: 434 PSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAF 486
             P+       VR   +PSG LI+    G S +  V+H++++   V  + + L  +    
Sbjct: 301 GGPSMPAVQQFVRAEMQPSGYLIRPCEGGGSLIHIVDHMDLEPWSVPEVLRPLYESSTVL 360

Query: 487 GAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSA 544
             K  ++ L R   ++A  +++++  G         GR+  ++   ++R+   F   V+ 
Sbjct: 361 AQKVTMSAL-RHLRQIAQEVSSDVVLGW--------GRQPAALRTFSQRLCKGFNEAVNG 411

Query: 545 STAHTWTTLSGTGADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPP 592
            T   W+ +   G +DV ++   S               P    GI+ + A+     VPP
Sbjct: 412 FTDDGWSLMGNDGMEDVTILVNSSPSKLFGQQFASSDGLPALGGGILCAKASMLLQNVPP 471

Query: 593 KRVFDFLRDENTRSEW-----DILS--------------------NGGVVQEMAHIANGR 627
             +  FLR+   RSEW     D  S                     G V+  +AH     
Sbjct: 472 ALLVRFLREH--RSEWADSNIDAYSAASWKASPCTVPSSRVGGFGGGQVILPLAHTVEHE 529

Query: 628 DTGNCVSLLRVNCLQSANSSQSNMLILQ------ESCTDPTASFVIYAPVDIVAMNVVLN 681
           +    + L      Q       +M +LQ      E+     A  V +AP+D         
Sbjct: 530 EFLEVIKLENHGLTQEEALLSRDMFLLQLCSGLDENAVGACAELV-FAPID--------- 579

Query: 682 GGDPDYVALLPSGFAILPDGTSLHGAN------------IGEAAS------GG------S 717
               D   LLPSGF ++P  + + G++            IG A +      GG      S
Sbjct: 580 ASLADSSPLLPSGFRVIPLDSGMDGSSPNRTLDLASSLEIGSAGARTSVDYGGNSGNLRS 639

Query: 718 LLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           +LT+AFQ   ++     ++  +   V  ++A +V+R+  +L+
Sbjct: 640 VLTIAFQFTFENHLRENVASMARQYVRGVVA-SVQRVAMALA 680


>gi|317160484|gb|ADV04324.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 845

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 160/750 (21%), Positives = 292/750 (38%), Gaps = 169/750 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYVRYTAEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A N    E                            EN RL++
Sbjct: 76  -QRKEASRLQAVNRKLSAMNKLLME----------------------------ENDRLQK 106

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y  + + N  + +       +  +V              +   + L   
Sbjct: 107 QVSQL-VYENGYFRQQLQNASIATTDTSCESVVTSVK-------------HQQQNHLTPR 152

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A+     W+  + G          ++  P  IG  
Sbjct: 153 DPPRDASPAGLLSIAEETLTEFLSKAKGNAVEWI-QMPG----------MKPGPDAIGIV 201

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R  ++V ++   + EIL D   W       +    +++VL+    GN  
Sbjct: 202 TISHGCTGVAARACSLVGIDPTKVAEILKDRTSW-------LRDCRSVDVLTAFSTGN-G 253

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L   R+ + +RY     +G+  V + SL   +  P+       VR
Sbjct: 254 GTVELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLVVCERSLSGTQGGPSMPAVQHFVR 313

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
              +PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L R  
Sbjct: 314 AEMQPSGYLIRPCEGGGSLIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKVTMAAL-RHL 372

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            ++A  +++++  G         GR+  ++   ++R+   F   V+  T   W+ +   G
Sbjct: 373 RQIAQEVSSDVVLGW--------GRQPAALRTFSQRLCKGFNEAVNGFTDDGWSLMGNDG 424

Query: 558 ADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            DDV ++   S               P    GI+ + A+     VPP  +  FLR+   R
Sbjct: 425 MDDVTILINSSPSKLLGQQFASSDGLPALGGGILCAKASMLLQNVPPALLVRFLREH--R 482

Query: 606 SEW-----DILSNGG---------------------VVQEMAHIANGRDTGNCVSLLRVN 639
           SEW     D  S                        V+  +AH     +    + L    
Sbjct: 483 SEWADSNIDAYSAASWKASPCTVPSSRIGGFGGGGQVILPLAHTVEHEEFLEVIKLENNG 542

Query: 640 CLQSANSSQSNMLILQ------ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPS 693
             Q       +M +LQ      E+     A  V +AP+D             D   LLPS
Sbjct: 543 LTQEEALLSRDMFLLQLCSGIDENAVGACAELV-FAPID---------ASLADSSPLLPS 592

Query: 694 GFAILPDGTSLHGAN------------IGEAAS------GG------SLLTVAFQILVDS 729
           GF ++P  + + G++            IG A +      GG      S+LT+AFQ   ++
Sbjct: 593 GFRVIPLDSGMDGSSPNRTLDLASALEIGSAGTRTSVDYGGNSSNLRSVLTIAFQFTFEN 652

Query: 730 VPTAKLSLGSVATVNNLIACTVERIKASLS 759
                ++  +   V  ++A +V+R+  +L+
Sbjct: 653 HLRENVATMARQYVRGVVA-SVQRVAMALA 681


>gi|356515619|ref|XP_003526496.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like [Glycine
           max]
          Length = 845

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 168/751 (22%), Positives = 292/751 (38%), Gaps = 171/751 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 20  KYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 77

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A N    E                            EN RL++
Sbjct: 78  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 108

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++  +    + +  +   N   L+    +   E  V +             G  +L    
Sbjct: 109 QVSHLVYENSFFRQQTHNNNATLATTDTNTSCESVVTS-------------GQRNLTPQQ 155

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 156 HPPRDASPAGLLSIAEETLAEFLSKAT-----------GTAVEWVQMPGMKPGPDSIGIV 204

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W            T++VL+    GN  
Sbjct: 205 AISHGCPGVAARACGLVGLEPTRVAEILKDRLSW-------FRDCRTVDVLNVMSTGN-G 256

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G++ V + SL+N +  PA       VR
Sbjct: 257 GTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSFVVCERSLNNTQNGPAMPPVQHFVR 316

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H+ ++   V  + + L  +      +  +A L R  
Sbjct: 317 ADMLPSGYLIRPCEGGGSIIHIVDHMVLEPWSVPEVLRPLYESSMLLAQRTTMAAL-RHL 375

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            +++  ++    TG         GR+  ++  L++R+   F   V+      W+ L   G
Sbjct: 376 RQISQEVSQPSVTGW--------GRRPAALRALSQRLSKGFNEAVNGFADDGWSMLESDG 427

Query: 558 ADDVRVMTRKSVDDPGRPPGI---------------VLSAATSFWLP-VPPKRVFDFLRD 601
            DDV ++   S   P +  G+               VL A  S  L  VPP  +  FLR+
Sbjct: 428 IDDVTLLVNSS---PSKMMGVSLVYNNNGFPSVSSSVLCAKASMLLQNVPPAILLRFLRE 484

Query: 602 ENTRSEW-----DILS-------------------NGGVVQEMAHIANGRDTGNCVSLLR 637
              RSEW     D  S                    G V+  +AH     +    + L  
Sbjct: 485 H--RSEWADSSIDAYSAAAIKAGPCSLPGARSGGFGGQVILPLAHTIEHEEFMEVIKLEN 542

Query: 638 VNCLQSANSSQSNMLILQ-----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLP 692
           +   +   S   ++ +LQ     +     T++ +++AP+D             D   +LP
Sbjct: 543 MGYYRDDMSIPGDVFLLQLCSGVDEHAVGTSAELVFAPID---------ASFSDDAPILP 593

Query: 693 SGFAILP---------------------DGTSLHGA---NIGEAASGGSLLTVAFQILVD 728
           SGF I+P                      GT+ + A   N   + S  S++T+AFQ   +
Sbjct: 594 SGFRIIPLDSGTDAASPNRTLDLASALEVGTTANKAASDNSAHSGSTKSVMTIAFQFAFE 653

Query: 729 SVPTAKLSLGSVATVNNLIACTVERIKASLS 759
                 ++  +   V ++IA +V+R+  +LS
Sbjct: 654 VHLQENIATMARQYVRSIIA-SVQRVSLALS 683


>gi|297743212|emb|CBI36079.3| unnamed protein product [Vitis vinifera]
          Length = 835

 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 165/747 (22%), Positives = 291/747 (38%), Gaps = 169/747 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 14  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 71

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A N    E                            EN RL++
Sbjct: 72  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 102

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y  +   N              LA  +   +  +  G+ +     L   
Sbjct: 103 QVSQL-VYENGYFRQHTQN------------TTLATKDTSCESVVTSGQHH-----LTPQ 144

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 145 HPPRDASPAGLLSIAEETLTEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGIV 193

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W             ++VL+     N  
Sbjct: 194 AISHGCTGVAARACGLVGLEPTRVAEILKDRPSW-------FRDCRAVDVLNVLPTAN-G 245

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  V + SL N +  P+       VR
Sbjct: 246 GTIELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSMPPVQHFVR 305

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L RQ 
Sbjct: 306 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQL 364

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            ++A  ++ +  TG         GR+  ++  L++R+   F   ++  T   W+ +   G
Sbjct: 365 RQIAQEVSQSNVTGW--------GRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDG 416

Query: 558 ADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            DDV ++   S +             P     ++ + A+     VPP  +  FLR+   R
Sbjct: 417 IDDVTILVNSSPEKLTGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--R 474

Query: 606 SEW-----DILSNGG-------------------VVQEMAHIANGRDTGNCVSLLRV-NC 640
           SEW     D  S                      V+  +AH     +    + L  V +C
Sbjct: 475 SEWADNNIDAYSAAAVKVGPCSLPGSRVGSFGSQVILPLAHTIEHEEFLEVIKLEGVGHC 534

Query: 641 LQSANSSQSNMLILQESCTDP----TASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFA 696
            + A   +   L+   S  D     T + +I+AP+D             D   LLPSGF 
Sbjct: 535 PEDAMMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFR 585

Query: 697 ILPDGTSLHGAN------------IGEAA---------SGG---SLLTVAFQILVDSVPT 732
           I+P  +    ++            IG A          +GG   S++T+AF+   +S   
Sbjct: 586 IIPLDSGKEASSPNRTLDLASALEIGPAGNRSSNDYSVNGGNTRSVMTIAFEFAFESHLQ 645

Query: 733 AKLSLGSVATVNNLIACTVERIKASLS 759
             ++  +   V ++I+ +V+R+  +LS
Sbjct: 646 ENVASMARQYVRSIIS-SVQRVALALS 671


>gi|225442501|ref|XP_002284003.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like isoform 1
           [Vitis vinifera]
          Length = 837

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 165/747 (22%), Positives = 291/747 (38%), Gaps = 169/747 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 16  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 73

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A N    E                            EN RL++
Sbjct: 74  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 104

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y  +   N              LA  +   +  +  G+ +     L   
Sbjct: 105 QVSQL-VYENGYFRQHTQN------------TTLATKDTSCESVVTSGQHH-----LTPQ 146

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 147 HPPRDASPAGLLSIAEETLTEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGIV 195

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W             ++VL+     N  
Sbjct: 196 AISHGCTGVAARACGLVGLEPTRVAEILKDRPSW-------FRDCRAVDVLNVLPTAN-G 247

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  V + SL N +  P+       VR
Sbjct: 248 GTIELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSMPPVQHFVR 307

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L RQ 
Sbjct: 308 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQL 366

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            ++A  ++ +  TG         GR+  ++  L++R+   F   ++  T   W+ +   G
Sbjct: 367 RQIAQEVSQSNVTGW--------GRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDG 418

Query: 558 ADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            DDV ++   S +             P     ++ + A+     VPP  +  FLR+   R
Sbjct: 419 IDDVTILVNSSPEKLTGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--R 476

Query: 606 SEW-----DILSNGG-------------------VVQEMAHIANGRDTGNCVSLLRV-NC 640
           SEW     D  S                      V+  +AH     +    + L  V +C
Sbjct: 477 SEWADNNIDAYSAAAVKVGPCSLPGSRVGSFGSQVILPLAHTIEHEEFLEVIKLEGVGHC 536

Query: 641 LQSANSSQSNMLILQESCTDP----TASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFA 696
            + A   +   L+   S  D     T + +I+AP+D             D   LLPSGF 
Sbjct: 537 PEDAMMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFR 587

Query: 697 ILPDGTSLHGAN------------IGEAA---------SGG---SLLTVAFQILVDSVPT 732
           I+P  +    ++            IG A          +GG   S++T+AF+   +S   
Sbjct: 588 IIPLDSGKEASSPNRTLDLASALEIGPAGNRSSNDYSVNGGNTRSVMTIAFEFAFESHLQ 647

Query: 733 AKLSLGSVATVNNLIACTVERIKASLS 759
             ++  +   V ++I+ +V+R+  +LS
Sbjct: 648 ENVASMARQYVRSIIS-SVQRVALALS 673


>gi|89514849|gb|ABD75299.1| class III homeodomain-leucine zipper protein HB10 [Physcomitrella
           patens]
 gi|110349520|gb|ABG73235.1| class III HD-Zip protein HB10 [Physcomitrella patens]
          Length = 880

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 188/774 (24%), Positives = 311/774 (40%), Gaps = 161/774 (20%)

Query: 84  QEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQVKFWFQ 139
           ++Q  +   +Y R+TQ Q++ +E  + ECP P   +R +L +E      +EP Q+K WFQ
Sbjct: 6   KDQTMDASGKYVRYTQEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQ 65

Query: 140 NKRTQMKTQHERHENTQLRTENEKLRADN---MRYREALSNASCPNCGGPTAIGEMSFDE 196
           N+R + K   +R E T+L + N KL A N   M   E L+  +                 
Sbjct: 66  NRRCREK---QRKEATRLVSVNAKLTALNKLLMEENERLAKHT----------------- 105

Query: 197 HHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPG---- 252
             L LEN  LR++I             P + +P     +PS+ L+  +   GA  G    
Sbjct: 106 SQLTLENHALRQQI-------------PNLPFPDGRHRLPSQILQSPLKKEGAVNGGDES 152

Query: 253 -IGGG---EMYGAADLLRSISAPTEADKPMIIELAVAAMEE----------LIRMAQMGE 298
              GG   +++G A +    S  T  D  +   L      +          L+  A+   
Sbjct: 153 STQGGICVKVHGQAGI---ASTDTSCDSAVTGGLPHRLTPQHSPRDSSPAGLLATAEETL 209

Query: 299 PLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMD 356
             ++    GTA    +   ++  P  IG       C   A+R   +V ++   + E+L D
Sbjct: 210 TEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACGLVALDISKVTEVLKD 269

Query: 357 VNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQ 416
             +W       +     +E+L     GN  G ++++  +   P+ L P R+   +RY   
Sbjct: 270 RPRW-------LQDCRRMEILGALPTGN-GGTIELLYTQMYAPTTLAPARDYCTLRYTTI 321

Query: 417 HGEGTWAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDD 469
             +G   + + SL  ++  P        VR    PSG LI+    G   +  V+H   + 
Sbjct: 322 LEDGNVVICERSLSGVQGGPTMPPVQSFVRGEMYPSGYLIRPCDGGGCIIHVVDHYNNEP 381

Query: 470 RGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK 529
             V  + + L  +      K  +A L R   RLA+       +GE GV  N      +  
Sbjct: 382 WSVPEVLRPLYESPAVLSQKSTLAAL-RHLRRLAAE-----ESGE-GVPRNGQHPAVLRT 434

Query: 530 LAERMVISFCAGVSASTAHTWTTLSGTGADDVRVM---TRKSVDDP--------GRPPGI 578
           L +R+   F   V+      W      G DDV VM   T KS++              GI
Sbjct: 435 LCQRLTKGFNNAVNGFPDDGWEATISDGLDDVSVMLNATPKSMEGQIASDKLLYSLGGGI 494

Query: 579 VLSAATSFWLPVPPKRVFDFLRDENTRSEW---DILSN---------------GGV--VQ 618
           + + A+     VP   +  FLR+   RSEW   DI +N               GGV  VQ
Sbjct: 495 LCAKASMLLQNVPSSLLIRFLREH--RSEWADYDIDANVASFRSNGNGYVPRCGGVSHVQ 552

Query: 619 EMAHIANGRDTGNCVSLLRV---NCLQSANSSQSNMLILQESCTDPTA----SFVIYAPV 671
               +A   ++G  + +++V   + +Q    S+   L+   S  D +A    + +++APV
Sbjct: 553 LPLPLAYSGESGEILEVVKVEGHSSVQHMVLSRDTFLLQLCSGVDESAVGACAQLVFAPV 612

Query: 672 DIVAMNVVLNGGDPDYVALLPSGFAILP------DG----------TSLHGANI----GE 711
           D+            D + LLPSGF + P      DG          ++L G N     G+
Sbjct: 613 DVALA---------DDIPLLPSGFCVSPIDTNVVDGFGLDRTLDLASTLEGGNDLRLNGD 663

Query: 712 AASGG------SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           A S        S+LT+AFQ   +      ++  +   V N++A +V+++  +L+
Sbjct: 664 AKSSNSPGQMRSVLTIAFQFAYEVHTRETVAAMARQYVRNVVA-SVQQVAMALA 716


>gi|356539327|ref|XP_003538150.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Glycine
           max]
          Length = 842

 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 176/756 (23%), Positives = 296/756 (39%), Gaps = 192/756 (25%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 25  KYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 82

Query: 149 HERHENTQLRTENEKLRA-------DNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRL 201
            +R E ++L+T N KL A       +N R ++ +S   C                     
Sbjct: 83  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC--------------------- 120

Query: 202 ENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGA 261
           EN  +R+++   SA         VV  P                                
Sbjct: 121 ENGFMRQQLHTPSATTTDASCDSVVTTP-------------------------------- 148

Query: 262 ADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF 321
              LR  S P       ++ +A   + E +  A            GTA    +   ++  
Sbjct: 149 QHTLRDASNPAG-----LLSIAEETLTEFLSKAT-----------GTAVDWVQMPGMKPG 192

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  +G       C   A+R   +V +    + EIL D   W            +LEV + 
Sbjct: 193 PDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTM 245

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN--LRPSPA 437
             AGN  G ++++  +   P+ L P R+ + +RY      G+  V + SL      P+PA
Sbjct: 246 FPAGN-GGTIELVYTQTYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGSGTGPNPA 304

Query: 438 -----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                VR    PSG LI+    G S +  V+H+ ++   V  + + L  +      K  +
Sbjct: 305 AAAQFVRAETLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTI 364

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTW 550
           A L R   ++A   +  +  G         GR+   +   ++R+   F   V+      W
Sbjct: 365 AAL-RYIRQIAQETSGEVVYGL--------GRQPAVLRTFSQRLSRGFNDAVNGFNDDGW 415

Query: 551 TTLSGTGADDV--RVMTRKSVDDPGRPP-------GIVLSAATSFWLPVPPKRVFDFLRD 601
           T L+  GA+DV   V + K++     P        GI+ + A+     VPP  +  FLR+
Sbjct: 416 TVLNCDGAEDVIIAVNSTKNLSGTSNPASSLTFLGGILCAKASMLLQNVPPAVLVRFLRE 475

Query: 602 ENTRSEWDILS----NGGVVQEMAHIANG----RDTGNCV-----------SLLRVNCLQ 642
              RSEW   +    +   ++   +   G    R TG+ +            +L V  L+
Sbjct: 476 H--RSEWADFNVDAYSAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRLE 533

Query: 643 SANSSQSNMLI-----LQESCT--DPTA----SFVIYAPVDIVAMNVVLNGGDPDYVALL 691
             + +Q +  +     L + C+  D  A    S +++AP+D +          PD   L+
Sbjct: 534 GHSLAQEDAFVSRDIHLLQICSGIDENAVGACSELVFAPIDEMF---------PDDAPLV 584

Query: 692 PSGFAILP------------------DGTSLHGANIGEAASGG----------SLLTVAF 723
           PSGF I+P                  D TS  G  +G A + G          S+LT+AF
Sbjct: 585 PSGFRIIPLDSKPGDKKDAVATNRTLDLTS--GFEVGPATTAGADASSSQNTRSVLTIAF 642

Query: 724 QILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           Q   DS     +++ +   V ++I+ +V+R+  ++S
Sbjct: 643 QFPFDSSLQDNVAVMARQYVRSVIS-SVQRVAMAIS 677


>gi|449522211|ref|XP_004168121.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Cucumis
           sativus]
          Length = 841

 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 177/772 (22%), Positives = 302/772 (39%), Gaps = 189/772 (24%)

Query: 75  NHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLE 130
           +H  +S     +  +   +Y R+T  Q++ +E  + ECP P   +R++L R+      +E
Sbjct: 7   HHRESSTGSITRHLDSSGKYVRYTSEQVEALERVYAECPKPSSLRRQQLVRDCPILSNIE 66

Query: 131 PLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRA-------DNMRYREALSNASCPNC 183
           P Q+K WFQN+R + K   +R E ++L+T N KL A       +N R ++ +S   C   
Sbjct: 67  PKQIKVWFQNRRCREK---QRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVSQLVC--- 120

Query: 184 GGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELA 243
                             EN  +R+++  + A A        V    ++ P PSR     
Sbjct: 121 ------------------ENGFMRQQLHTVPAAATADASCDSV----VTTPQPSR----- 153

Query: 244 VGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPM-IIELAVAAMEELIRMAQMGEPLWM 302
                                        +A+ P  ++ +A   + E +  A        
Sbjct: 154 ----------------------------RDANNPAGLLSIAEETLAEFLSKAT------- 178

Query: 303 TSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQW 360
               GTA    +   ++  P  +G       C   A+R   +V +    + EIL D   W
Sbjct: 179 ----GTAVDWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPSKIAEILKDRPSW 234

Query: 361 STVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEG 420
                       +LEV +   AGN  G ++++  +   P+ L P R+ + +RY      G
Sbjct: 235 -------FRDCRSLEVFTMFPAGN-GGTIELVYTQVYAPTTLAPARDFWTLRYTITLENG 286

Query: 421 TWAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVH 473
           +  V + SL      P+       VR    PSG LI+    G S +  V+H+ ++   V 
Sbjct: 287 SLVVCERSLSGSGAGPSEAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWHVP 346

Query: 474 NLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLA 531
            + + L  +      K  +A L R   ++A   +  +  G         GR+   +   +
Sbjct: 347 EVLRPLYESSKVVAQKMTIAAL-RYVRQIAQETSGEVVYGL--------GRQPAVLRTFS 397

Query: 532 ERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRP---------PGIVLSA 582
           +R+   F   V+    + W+ ++  GA+DV V+T  S  + G           PG VL A
Sbjct: 398 QRLSRGFNDAVNGFNDNGWSLINCEGAEDV-VLTVNSTKNFGTTSNPANSLTYPGGVLCA 456

Query: 583 ATSFWLP-VPPKRVFDFLRDENTRSEWDILS----NGGVVQEMAHIANG----RDTGNCV 633
             S  L  VPP  +  FLR+   RSEW   +    +   ++  ++   G    R TG+ +
Sbjct: 457 KASMLLQNVPPAVLVRFLREH--RSEWADFNIDAYSAATLKANSYTYPGMRPTRFTGSQI 514

Query: 634 -----------SLLRVNCLQSANSSQSNMLI-----LQESCT--DPTA----SFVIYAPV 671
                       LL V  L+     Q +  +     L + C+  D  A    S +I+AP+
Sbjct: 515 IMPLGHTIEHEELLEVIRLEGHPMVQEDAFVSRDIHLLQICSGIDENAVGACSELIFAPI 574

Query: 672 DIVAMNVVLNGGDPDYVALLPSGFAILP------------------------DGTSLHGA 707
           D +          PD   LLPSGF I+P                         GTS    
Sbjct: 575 DEMF---------PDDAPLLPSGFRIIPLDSRTSDAKGSQRTLDLTSSLEVGSGTSNTAG 625

Query: 708 NIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           +   + S  S+LT+AFQ   +S     ++  +   V ++I+ +V+R+  ++S
Sbjct: 626 DASSSQSARSVLTIAFQFPFESSMQDNVANMAHQYVRSVIS-SVQRVAMAIS 676


>gi|168024520|ref|XP_001764784.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|90110442|gb|ABD90523.1| class III homeodomain-leucine zipper [Physcomitrella patens]
 gi|162684078|gb|EDQ70483.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 187/765 (24%), Positives = 307/765 (40%), Gaps = 161/765 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+TQ Q++ +E  + ECP P   +R +L +E      +EP Q+K WFQN+R + K  
Sbjct: 6   KYVRYTQEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK-- 63

Query: 149 HERHENTQLRTENEKLRADN---MRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENAR 205
            +R E T+L + N KL A N   M   E L+  +                   L LEN  
Sbjct: 64  -QRKEATRLVSVNAKLTALNKLLMEENERLAKHT-----------------SQLTLENHA 105

Query: 206 LREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPG-----IGGG---E 257
           LR++I             P + +P     +PS+ L+  +   GA  G       GG   +
Sbjct: 106 LRQQI-------------PNLPFPDGRHRLPSQILQSPLKKEGAVNGGDESSTQGGICVK 152

Query: 258 MYGAADLLRSISAPTEADKPMIIELAVAAMEE----------LIRMAQMGEPLWMTSLDG 307
           ++G A +    S  T  D  +   L      +          L+  A+     ++    G
Sbjct: 153 VHGQAGI---ASTDTSCDSAVTGGLPHRLTPQHSPRDSSPAGLLATAEETLTEFLAKATG 209

Query: 308 TAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFS 365
           TA    +   ++  P  IG       C   A+R   +V ++   + E+L D  +W     
Sbjct: 210 TAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACGLVALDISKVTEVLKDRPRW----- 264

Query: 366 GIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVV 425
             +     +E+L     GN  G ++++  +   P+ L P R+   +RY     +G   + 
Sbjct: 265 --LQDCRRMEILGALPTGN-GGTIELLYTQMYAPTTLAPARDYCTLRYTTILEDGNVVIC 321

Query: 426 DVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQ 478
           + SL  ++  P        VR    PSG LI+    G   +  V+H   +   V  + + 
Sbjct: 322 ERSLSGVQGGPTMPPVQSFVRGEMYPSGYLIRPCDGGGCIIHVVDHYNNEPWSVPEVLRP 381

Query: 479 LVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISF 538
           L  +      K  +A L R   RLA+       +GE GV  N      +  L +R+   F
Sbjct: 382 LYESPAVLSQKSTLAAL-RHLRRLAAE-----ESGE-GVPRNGQHPAVLRTLCQRLTKGF 434

Query: 539 CAGVSASTAHTWTTLSGTGADDVRVM---TRKSVDDP--------GRPPGIVLSAATSFW 587
              V+      W      G DDV VM   T KS++              GI+ + A+   
Sbjct: 435 NNAVNGFPDDGWEATISDGLDDVSVMLNATPKSMEGQIASDKLLYSLGGGILCAKASMLL 494

Query: 588 LPVPPKRVFDFLRDENTRSEW---DILSN---------------GGV--VQEMAHIANGR 627
             VP   +  FLR+   RSEW   DI +N               GGV  VQ    +A   
Sbjct: 495 QNVPSSLLIRFLREH--RSEWADYDIDANVASFRSNGNGYVPRCGGVSHVQLPLPLAYSG 552

Query: 628 DTGNCVSLLRV---NCLQSANSSQSNMLILQESCTDPTA----SFVIYAPVDIVAMNVVL 680
           ++G  + +++V   + +Q    S+   L+   S  D +A    + +++APVD+       
Sbjct: 553 ESGEILEVVKVEGHSSVQHMVLSRDTFLLQLCSGVDESAVGACAQLVFAPVDVALA---- 608

Query: 681 NGGDPDYVALLPSGFAILP------DG----------TSLHGANI----GEAASGG---- 716
                D + LLPSGF + P      DG          ++L G N     G+A S      
Sbjct: 609 -----DDIPLLPSGFCVSPIDTNVVDGFGLDRTLDLASTLEGGNDLRLNGDAKSSNSPGQ 663

Query: 717 --SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
             S+LT+AFQ   +      ++  +   V N++A +V+++  +L+
Sbjct: 664 MRSVLTIAFQFAYEVHTRETVAAMARQYVRNVVA-SVQQVAMALA 707


>gi|224092274|ref|XP_002309538.1| predicted protein [Populus trichocarpa]
 gi|60327635|gb|AAX19057.1| class III HD-Zip protein 8 [Populus trichocarpa]
 gi|222855514|gb|EEE93061.1| predicted protein [Populus trichocarpa]
          Length = 828

 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 166/746 (22%), Positives = 288/746 (38%), Gaps = 163/746 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 5   KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSHIEPKQIKVWFQNRRCREK-- 62

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A N    E                            EN RL++
Sbjct: 63  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 93

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y  +   N              LA  +   +  +  G+ +     L   
Sbjct: 94  QVSQL-VYENSYFRQQTQN-----------ATNLATTDTSCESVVTSGQHH-----LTPQ 136

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + + +  A            GTA    +   ++  P  IG  
Sbjct: 137 HPPRDASPAGLLSIAEETLAQFLSKA-----------TGTAVEWVQMPGMKPGPDSIGIV 185

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAM-TLEVLSTGVAGNY 385
                C   A+R   +V +    + EIL D   W   F     RA+  +  LSTG  G  
Sbjct: 186 AISHGCTGVAARACGLVGLEPTRVAEILKDRPSW---FRD--CRAVDVVNALSTGSGGT- 239

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------V 438
              ++++  +   P+ L P R+ + +RY     +G+  V + SL+N +  P+       V
Sbjct: 240 ---IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPTQHFV 296

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R    PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L   
Sbjct: 297 RAEMLPSGYLIRPCEGGGSIIHVVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAALRHL 356

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTG 557
            +    V   N        +T    R + L+ L++R+   F   V+      W+ L   G
Sbjct: 357 RQVSQEVSQPN--------VTGWGRRPAALRALSQRLSKGFNEAVNGFADEGWSMLESDG 408

Query: 558 ADDVRVMTRKSVDDPGRPPGI--------------VLSAATSFWLP-VPPKRVFDFLRDE 602
            DDV V+   S   P +  G+              VL A  S  L  VPP  +  FLR+ 
Sbjct: 409 IDDVTVLVNSS---PAKMMGVNFSYANGFPSMSNAVLCAKASMLLQNVPPAILLRFLREH 465

Query: 603 NTRSEW-----DILS-------------------NGGVVQEMAHIANGRDTGNCVSLLRV 638
             RSEW     D  +                    G V+  +AH     +     S + V
Sbjct: 466 --RSEWADSGIDAYAAAAVKAGPCSLPMSRAGNFGGQVILPLAHTIEHEEAST--SFMEV 521

Query: 639 NCLQSANSSQSNML----ILQESCTDP------TASFVIYAPVD---------------I 673
             L++    +  ++     L + C+        T + +I+AP+D               I
Sbjct: 522 IKLENMGYREDMLMPGDVFLLQLCSGVDENAVGTCAELIFAPIDASFSDDAPIIPSGFRI 581

Query: 674 VAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTA 733
           + ++  ++   P+    L S   + P G    G   G +    S++T+AFQ   +     
Sbjct: 582 IPLDSGMDASSPNRTLDLASALEVGPAGNRASGDLSGRSGCTKSVMTIAFQFAFEMHLQE 641

Query: 734 KLSLGSVATVNNLIACTVERIKASLS 759
            ++  +   V ++IA +V+R+  +LS
Sbjct: 642 NVASMARQYVRSIIA-SVQRVALALS 666


>gi|115440077|ref|NP_001044318.1| Os01g0760800 [Oryza sativa Japonica Group]
 gi|31339111|dbj|BAC77162.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
 gi|113533849|dbj|BAF06232.1| Os01g0760800, partial [Oryza sativa Japonica Group]
          Length = 134

 Score =  115 bits (288), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 62/128 (48%), Positives = 82/128 (64%), Gaps = 11/128 (8%)

Query: 91  KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           +K YHRHT  QI+ MEA FKE PHPD++QR+++S++LGL   QVKFWFQN+RTQ+K   E
Sbjct: 1   RKNYHRHTAEQIRIMEALFKESPHPDERQRQQVSKQLGLSARQVKFWFQNRRTQIK---E 57

Query: 151 RHENTQLRTENEKLRADNMRYREALSNAS-CPNCG-------GPTAIGEMSFDEHHLRLE 202
           RHEN+ L++E EKL+ ++   RE     S C NCG          A       E  LRLE
Sbjct: 58  RHENSLLKSELEKLQDEHRAMRELAKKPSRCLNCGVVATSSDAAAAATAADTREQRLRLE 117

Query: 203 NARLREEI 210
            A+L+ E+
Sbjct: 118 KAKLKAEV 125


>gi|206572103|gb|ACI13684.1| putative REV HD-ZipIII [Malus x domestica]
          Length = 845

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 158/690 (22%), Positives = 265/690 (38%), Gaps = 164/690 (23%)

Query: 73  SENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGL--- 129
           + + E +SG    +  +  K Y R+T  Q++ +E  + ECP P   +R++L RE  +   
Sbjct: 6   AHHRESSSGSSINKHLDAGK-YVRYTSEQVEALERVYAECPKPSSLRRQQLIRECSILSN 64

Query: 130 -EPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRA-------DNMRYREALSNASCP 181
            EP Q+K WFQN+R + K   +R E+++L+T N KL A       +N R ++ +S   C 
Sbjct: 65  IEPRQIKVWFQNRRCREK---QRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVC- 120

Query: 182 NCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLE 241
                               EN  +R+++   SA      G  VV  P  S         
Sbjct: 121 --------------------ENGYMRQQLHSASAATTDASGDSVVTTPQHS--------- 151

Query: 242 LAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLW 301
                                  LR  + P       ++ +A   + E +  A       
Sbjct: 152 -----------------------LRDANNPAG-----LLSVAEETLAEFLSKAT------ 177

Query: 302 MTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQ 359
                GTA    +   ++  P  +G       C   A+R   +V +    + EIL D   
Sbjct: 178 -----GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPS 232

Query: 360 WSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGE 419
           W            +LEV +   AGN  G ++++  +   P+ L P R+ + +RY      
Sbjct: 233 W-------FRDCRSLEVFTMFPAGN-GGTIELIYTQTYAPTTLAPARDFWTLRYTATLDN 284

Query: 420 GTWAVVDVSLDN--LRPSPA-----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV 472
           G++ V + SL      P+PA     VR    PSG LI+    G S V  V+H+ ++   V
Sbjct: 285 GSFVVCERSLSGSGAGPNPASASQFVRGAMLPSGYLIRPCEGGGSIVHIVDHLNLEAWSV 344

Query: 473 HNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKL 530
             + + L  +      +  +A L R   ++A   +        G +    GR+   +   
Sbjct: 345 PEVLRPLYESSKVVAQRMTIAAL-RYIRQIAEETS--------GEVVYSLGRQPAVLRTF 395

Query: 531 AERMVISFCAGVSASTAHTWTTLS--GTGADDVRVM---------TRKSVDDPGRPPGIV 579
           ++R++  F   V+      W+ ++  G GADDV +          T    +      G++
Sbjct: 396 SQRLIRGFNDAVNGFNDDGWSLVNCDGDGADDVIIAVNSTKNLTSTSNHANSLALLGGVL 455

Query: 580 LSAATSFWLPVPPKRVFDFLRDENTRSEW-DI------------------------LSNG 614
            + A+     VPP  +  FLR+   RSEW D                          + G
Sbjct: 456 CAKASMLLQNVPPAVLVRFLREH--RSEWADFNVDAYSATSMKAGAYAYPGMRPTRFTGG 513

Query: 615 GVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQE-SCTDPTA----SFVIYA 669
            ++  + H     +    V L   +  Q    +  ++ +LQ  S  D  A    S +++A
Sbjct: 514 QIIMPLGHTIEQEELLEVVRLEGHSLTQEDAFASRDIHLLQICSGVDENAVGACSELVFA 573

Query: 670 PVDIVAMNVVLNGGDPDYVALLPSGFAILP 699
           P+D +          PD   LLPSGF I+P
Sbjct: 574 PIDEMF---------PDDAPLLPSGFRIIP 594


>gi|297746262|emb|CBI16318.3| unnamed protein product [Vitis vinifera]
          Length = 844

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 161/701 (22%), Positives = 266/701 (37%), Gaps = 174/701 (24%)

Query: 61  LREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQR 120
           + ++  +S+ SGS N    SG           +Y R+T  Q++ +E  + ECP P   +R
Sbjct: 5   IAQQHRESSSSGSINKHLDSG-----------KYVRYTAEQVEALERVYLECPKPSSLRR 53

Query: 121 KELSREL----GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRA-------DNM 169
           ++L RE      +EP Q+K WFQN+R + K   +R E ++L+T N KL A       +N 
Sbjct: 54  QQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEEND 110

Query: 170 RYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYP 229
           R ++ +S   C                     EN  +R+++   SA       + VV  P
Sbjct: 111 RLQKQVSQLVC---------------------ENGYMRQQLQTASAATTDASCESVVTTP 149

Query: 230 LLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEE 289
             S                                LR  + P       ++ +A   + E
Sbjct: 150 QHS--------------------------------LRDANNPAG-----LLSIAEETLAE 172

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNH 347
            +  A            GTA    +   ++  P  +G       C   A+R   +V +  
Sbjct: 173 FLSKAT-----------GTAVDWVQMPGMKPGPDSVGIFAISHSCSGVAARACGLVSLEP 221

Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
             + EIL D   W            +LEV +   AGN  G ++++  +   P+ L P R+
Sbjct: 222 SKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-GGTVELLYTQIYAPTTLAPARD 273

Query: 408 SYYVRYCKQHGEGTWAVVDVSLDNLRPSP-------AVRCRRRPSGCLIQEMPNGYSKVT 460
            + +RY      G+  V + SL      P        VR    PSG LI+    G S + 
Sbjct: 274 FWTLRYTTSLDNGSLVVCERSLSGSGAGPNTAAAAQFVRAEMLPSGYLIRPCEGGGSIIH 333

Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITN 520
            V+H+ ++   V  + + L  +      K  +A L R   ++A   +  +  G       
Sbjct: 334 IVDHLNLEAWSVPEVLRPLYESSRVVAQKMTIAAL-RYIRQIAQETSGEVVYGL------ 386

Query: 521 QDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV--RVMTRKSVDDPGRP- 575
             GR+   +   ++R+   F   ++      W+ +S  GA+DV   V + K+++    P 
Sbjct: 387 --GRQPAVLRTFSQRLSRGFNDAINGFNDDGWSLMSCDGAEDVIIAVNSTKNLNTTSNPA 444

Query: 576 -----PGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEWDILS----------------- 612
                PG VL A  S  L  VPP  +  FLR+   RSEW   S                 
Sbjct: 445 NSLSLPGGVLCAKASMLLQNVPPAVLVRFLREH--RSEWADFSVDAYSAASLKASPYSYP 502

Query: 613 --------NGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCT--DPT 662
                      ++  + H     +    +  L  + L   ++  S  + L + C+  D  
Sbjct: 503 GMRPTRFTGSQIIMPLGHTIEHEELLEVIR-LEGHSLAHEDAFMSRDIHLLQICSGVDEN 561

Query: 663 A----SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 699
           A    S +++AP+D +          PD   LLPSGF I+P
Sbjct: 562 AVGACSELVFAPIDEMF---------PDDAPLLPSGFRIIP 593


>gi|449456008|ref|XP_004145742.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           REVOLUTA-like [Cucumis sativus]
          Length = 840

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 175/771 (22%), Positives = 299/771 (38%), Gaps = 188/771 (24%)

Query: 75  NHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLE 130
           +H  +S     +  +   +Y R+T  Q++ +E  + ECP P   +R++L R+      +E
Sbjct: 7   HHRESSTGSITRHLDSSGKYVRYTSEQVEALERVYAECPKPSSLRRQQLVRDCPILSNIE 66

Query: 131 PLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRA-------DNMRYREALSNASCPNC 183
           P Q+K WFQN+R + K   +R E ++L+T N KL A       +N R ++ +S   C   
Sbjct: 67  PKQIKVWFQNRRCREK---QRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVSQLVC--- 120

Query: 184 GGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELA 243
                             EN  +R+++  + A A        V    ++ P PSR     
Sbjct: 121 ------------------ENGFMRQQLHTVPAAATADASCDSV----VTTPQPSR----- 153

Query: 244 VGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMT 303
                                 R  + P       II+L                  ++ 
Sbjct: 154 ----------------------RDANNPAGXFSKPIIDL-----------------FFLL 174

Query: 304 SLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWS 361
           +   T+    +   ++  P  +G       C   A+R   +V +    + EIL D   W 
Sbjct: 175 TYKXTSCXWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPSKIAEILKDRPSW- 233

Query: 362 TVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGT 421
                      +LEV +   AGN  G ++++  +   P+ L P R+ + +RY      G+
Sbjct: 234 ------FRDCRSLEVFTMFPAGN-GGTIELVYTQVYAPTTLAPARDFWTLRYTITLENGS 286

Query: 422 WAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHN 474
             V + SL      P+       VR    PSG LI+    G S +  V+H+ ++   V  
Sbjct: 287 LVVCERSLSGSGAGPSEAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWHVPE 346

Query: 475 LYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAE 532
           + + L  +      K  +A L R   ++A   +  +  G         GR+   +   ++
Sbjct: 347 VLRPLYESSKVVAQKMTIAAL-RYVRQIAQETSGEVVYGL--------GRQPAVLRTFSQ 397

Query: 533 RMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRP---------PGIVLSAA 583
           R+   F   V+    + W+ ++  GA+DV V+T  S  + G           PG VL A 
Sbjct: 398 RLSRGFNDAVNGFNDNGWSLINCEGAEDV-VLTVNSTKNFGTTSNPANSLTYPGGVLCAK 456

Query: 584 TSFWLP-VPPKRVFDFLRDENTRSEWDILS----NGGVVQEMAHIANG----RDTGNCV- 633
            S  L  VPP  +  FLR+   RSEW   +    +   ++  ++   G    R TG+ + 
Sbjct: 457 ASMLLQNVPPAVLVRFLREH--RSEWADFNIDAYSAATLKANSYTYPGMRPTRFTGSQII 514

Query: 634 ----------SLLRVNCLQSANSSQSNMLI-----LQESCT--DPTA----SFVIYAPVD 672
                      LL V  L+     Q +  +     L + C+  D  A    S +I+AP+D
Sbjct: 515 MPLGHTIEHEELLEVIRLEGHPMVQEDAFVSRDIHLLQICSGIDENAVGACSELIFAPID 574

Query: 673 IVAMNVVLNGGDPDYVALLPSGFAILP------------------------DGTSLHGAN 708
            +          PD   LLPSGF I+P                         GTS    +
Sbjct: 575 EMF---------PDDAPLLPSGFRIIPLDSRTSDAKGSQRTLDLTSSLEVGSGTSNTAGD 625

Query: 709 IGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
              + S  S+LT+AFQ   +S     ++  +   V ++I+ +V+R+  ++S
Sbjct: 626 ASSSQSARSVLTIAFQFPFESSMQDNVANMAHQYVRSVIS-SVQRVAMAIS 675


>gi|356507931|ref|XP_003522716.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like [Glycine
           max]
          Length = 844

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 163/748 (21%), Positives = 290/748 (38%), Gaps = 166/748 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 20  KYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 77

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A N    E                            EN RL++
Sbjct: 78  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 108

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++  +      +  +   N   L+    +   E  V +             G  +L    
Sbjct: 109 QVSHL-VYENSFFRQQTHNNATLATTDTNTSCESVVTS-------------GQRNLTPQQ 154

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 155 HPPRDASPAGLLSIAEETLAEFLSKAT-----------GTAVEWVQMPGMKPGPDSIGIV 203

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W            T++VL+    GN  
Sbjct: 204 AISHGCPGVAARACGLVGLEPARVAEILKDRLSW-------FRDCRTVDVLNVMSTGN-G 255

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  V + SL+N +  PA       VR
Sbjct: 256 GTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNTQNGPAMPPVQHFVR 315

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
                SG LI+    G S +  V+H+ ++   V  + + L  +      +  +A L R  
Sbjct: 316 ADMLASGYLIRPCEGGGSIIHIVDHMVLEPWSVPEVLRPLYESSMLLAQRTTMAAL-RHL 374

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            +++  ++    TG         GR+  ++  L++R+   F   V+      W+ L   G
Sbjct: 375 RQISQEVSQPSVTGW--------GRRPAALRALSQRLSKGFNEAVNGFADDGWSMLESDG 426

Query: 558 ADDVRVMTRKS----------VDDPGRP---PGIVLSAATSFWLPVPPKRVFDFLRDENT 604
            DDV ++   S           ++ G P     ++ + A+     VPP  +  FLR+   
Sbjct: 427 IDDVTLLVNSSPSKMMGVNLGYNNNGFPSVSSSLLCAKASMLLQNVPPAILLRFLREH-- 484

Query: 605 RSEW-----DILS-------------------NGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           RSEW     D  S                    G V+  +AH     +    + L  +  
Sbjct: 485 RSEWADSSIDAYSAAAIKAGPCSLPGARPGGFGGQVILPLAHTIEHEEFMEVIKLENMGY 544

Query: 641 LQSANSSQSNMLILQ-----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGF 695
            +   +   ++ +LQ     +     T++ +++AP+D             D   +LPSGF
Sbjct: 545 YRDDMNIPGDVFLLQLCSGVDEHAVGTSAELVFAPID---------ASFSDDAPILPSGF 595

Query: 696 AILP---------------------DGTSLH---GANIGEAASGGSLLTVAFQILVDSVP 731
            I+P                      GT+ +   G N G + S  S++T+AFQ   +   
Sbjct: 596 RIIPLDSGTDAASPNRTLDLASALEVGTTANKAAGDNSGHSGSTKSVMTIAFQFAFEVHL 655

Query: 732 TAKLSLGSVATVNNLIACTVERIKASLS 759
              ++  +   V ++IA +V+R+  +LS
Sbjct: 656 QENIATMARQYVRSIIA-SVQRVSLALS 682


>gi|255549852|ref|XP_002515977.1| DNA binding protein, putative [Ricinus communis]
 gi|223544882|gb|EEF46397.1| DNA binding protein, putative [Ricinus communis]
          Length = 839

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 150/668 (22%), Positives = 255/668 (38%), Gaps = 154/668 (23%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++  RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYVRYTPEQVEALERLYHECPKPSSIRRQQFIRECPILSNIEPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A N    E                            EN RL++
Sbjct: 76  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 106

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y  +   N              LA  +      +  G+ +     L   
Sbjct: 107 QVSQL-VYENGYFRQHTQN------------TTLATKDTSCDSVVTSGQHH-----LTPQ 148

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 149 HQPRDASPAGLLSIAEETLTEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGII 197

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W             ++VL+     N  
Sbjct: 198 AISHGCTGVAARACGLVGLEPTRVAEILKDRPSW-------FRDCRAVDVLNVLPTAN-G 249

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  + + SL N +  P+       VR
Sbjct: 250 GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPSMPPVQHFVR 309

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L RQ 
Sbjct: 310 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQL 368

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTGA 558
            ++A   + +        +TN   R + L+ L++R+   F   ++  T   W+ +   G 
Sbjct: 369 RQIAQEASQS-------NVTNWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGM 421

Query: 559 DDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRS 606
           DDV ++   S +             P     ++ + A+     VPP  +  FLR+   RS
Sbjct: 422 DDVTILVNSSPEKLMGLNLSFSNGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RS 479

Query: 607 EW-----------------------DILSNGG-VVQEMAHIANGRDTGNCVSLLRVNCLQ 642
           EW                        I S GG V+  +AH     +       L V  L+
Sbjct: 480 EWADNNIDAYSAAAIKVGPCTLPGTRIGSFGGQVILPLAHTIEHEE------FLEVIKLE 533

Query: 643 SANSSQS------NMLILQ-----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALL 691
            A  S        +M +LQ     +     T + +I+AP+D             D   LL
Sbjct: 534 GAGHSPEDPIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLL 584

Query: 692 PSGFAILP 699
           PSGF I+P
Sbjct: 585 PSGFRIIP 592


>gi|444436435|gb|AGE09585.1| HB1-like protein [Eucalyptus cladocalyx]
          Length = 844

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 154/685 (22%), Positives = 261/685 (38%), Gaps = 156/685 (22%)

Query: 77  EGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPL 132
           +G  G           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP 
Sbjct: 7   DGKLGHSNSSNSLDNGKYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECPILSNIEPK 66

Query: 133 QVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEM 192
           Q+K WFQN+R + K   +R E ++L+  N KL A N    E                   
Sbjct: 67  QIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME------------------- 104

Query: 193 SFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPG 252
                    EN RL++++ ++      Y  +   N              LA  +   +  
Sbjct: 105 ---------ENDRLQKQVSQL-VYENGYFRQHTQNT------------TLATKDTSCESV 142

Query: 253 IGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVL 312
           +  G+       L S   P +A    ++ +A   + E +  A            GTA   
Sbjct: 143 VTSGQHQ-----LTSQHPPRDASPAGLLSIAEETLAEFLSKAT-----------GTAVEW 186

Query: 313 NEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSR 370
            +   ++  P  IG       C   A+R   +V +    + EIL D   W          
Sbjct: 187 VQMPGMKPGPDSIGIVAISHGCAGVAARACGLVGLEPTRVAEILKDRPSW-------FRD 239

Query: 371 AMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLD 430
              ++VL+     N  G ++++  +   P+ L P R+ + +RY     +G+  V + SL 
Sbjct: 240 CRAVDVLNVLPTAN-GGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLK 298

Query: 431 NLR--PS-----PAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTG 483
           N +  PS     P VR    PSG L++    G S +  V+H++++   V  + + L  + 
Sbjct: 299 NTQNGPSMPPVQPFVRAEMLPSGYLVRPCEGGGSIIRIVDHLDLEPWSVPEVLRPLYESS 358

Query: 484 NAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAG 541
                K  +A L RQ  ++A  ++    +G         GR+  ++  L++R+   F   
Sbjct: 359 TMLAQKTTMAAL-RQLRQIAQEVSQPNVSGW--------GRRPAALRALSQRLSRGFNEA 409

Query: 542 VSASTAHTWTTLSGTGADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLP 589
           ++  T   W+ +   G DDV ++   S D             P     ++ + A+     
Sbjct: 410 LNGFTDEGWSIMGNDGIDDVTILVNSSPDKLMGLNLSFSNGFPAVSNAVLCARASMLLQN 469

Query: 590 VPPKRVFDFLRDENTRSEW-----------------------DILSNGG-VVQEMAHIAN 625
           VPP  +  FLR+   RSEW                        I S GG V+  +AH   
Sbjct: 470 VPPAVLLRFLREH--RSEWADNSIDAYSAAAVKVGSCALPGSRIGSFGGQVILPLAHTIE 527

Query: 626 GRDTGNCVSLLRVNCLQSANSSQSNMLI-----LQESCT----DPTASF--VIYAPVDIV 674
             +       L V  L+    S  + L+       + C+    +   +F  +I+AP+D  
Sbjct: 528 HEE------FLEVIKLEGMGHSPEDALMPRDIFFLQMCSGVDENAVGTFAELIFAPID-- 579

Query: 675 AMNVVLNGGDPDYVALLPSGFAILP 699
                      D   LLPSGF I+P
Sbjct: 580 -------ASFADDAPLLPSGFRIIP 597


>gi|224074019|ref|XP_002304217.1| predicted protein [Populus trichocarpa]
 gi|60327631|gb|AAX19055.1| class III HD-Zip protein 6 [Populus trichocarpa]
 gi|222841649|gb|EEE79196.1| predicted protein [Populus trichocarpa]
          Length = 837

 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 165/767 (21%), Positives = 291/767 (37%), Gaps = 183/767 (23%)

Query: 80  SGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVK 135
           S  D +Q      +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K
Sbjct: 4   SCKDGKQPIMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIK 63

Query: 136 FWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFD 195
            WFQN+R + K   +R E ++L+  N KL A N    E                      
Sbjct: 64  VWFQNRRCREK---QRKEASRLQAVNRKLSAMNKLLME---------------------- 98

Query: 196 EHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGG 255
                 EN RL++++ ++      Y  +   N PL            A  +   +  +  
Sbjct: 99  ------ENDRLQKQVSQL-VYENGYFRQHTHNTPL------------ATKDTSCESVVTS 139

Query: 256 GEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNED 315
           G+ +     L     P +A    ++ +A   + E +  A            GTA      
Sbjct: 140 GQHH-----LTPQHPPRDASPAGLLSIAEETLTEFLSKA-----------TGTAV----- 178

Query: 316 EYVRTFPRGIGPKPTGF-----KCEA--SRETAVVIMNHISLVEILMDVNQWSTVFSGIV 368
           E+V+      GP  +G       C    +R   +V +    + EIL D   W        
Sbjct: 179 EWVQMPGMKPGPDSSGIVAISHGCAGVGARACGLVGLEPTRVAEILKDRPSW-------F 231

Query: 369 SRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS 428
                ++VL+     N  G ++++  +   P+ L P R+ + +RY     +G+  V + S
Sbjct: 232 RDCRAVDVLNVLPTAN-GGTIELLYMQLYAPTTLAPGRDFWLLRYTSVLEDGSLVVCERS 290

Query: 429 LDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVS 481
           L N +  P+       VR    PSG L++    G S +  V+H++++   V  + + L  
Sbjct: 291 LKNTQNGPSMPPVQHFVRAEMLPSGYLVRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYE 350

Query: 482 TGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCA 540
           +      K  +  L RQ  ++A   + +        +TN   R + L+ L++R+   F  
Sbjct: 351 SSTVLAQKTTMVAL-RQLRQIAQEASQS-------NVTNWGRRPAALRALSQRLSRGFNE 402

Query: 541 GVSASTAHTWTTLSGTGADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWL 588
            ++  +   W+ +   G DDV ++   S D             P     ++ + A+    
Sbjct: 403 ALNGFSDEGWSMIGNDGMDDVTILVNSSPDKLMGSNLSFTNGFPAVSSAVLCAKASMLLQ 462

Query: 589 PVPPKRVFDFLRDENTRSEW-----------------------DILSNGG-VVQEMAHIA 624
            VPP  +  FLR+   RSEW                        + S GG V+  +AH  
Sbjct: 463 NVPPAILLRFLREH--RSEWADNNIDAYAAAAVKVGPFSLQGSRVGSFGGQVILPLAHTI 520

Query: 625 NGRDTGNCVSLLRVNCLQSANSSQSNMLILQESC-----TDPTASFVIYAPVDIVAMNVV 679
              +    + L  V           ++ +LQ  C        T + +I+AP+D       
Sbjct: 521 EHEEFLEVIKLEGVGHSPEDPIMPRDVFLLQLCCGMDENAVGTCAELIFAPIDATFA--- 577

Query: 680 LNGGDPDYVALLPSGFAILP---------------------------DGTSLHGANIGEA 712
                 D   LLPSGF I+P                             +S H AN G  
Sbjct: 578 ------DDAPLLPSGFRIIPLDSGKEASSPNRTLDLAAALEVGPAGNRASSDHSANSG-- 629

Query: 713 ASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
               S++T+AF+   +S     ++  +   + ++I+ +V+R+  +LS
Sbjct: 630 -CTRSVMTIAFEFAFESHMQEHVASMTRQYIRSIIS-SVQRVALALS 674


>gi|357466691|ref|XP_003603630.1| Class III HD-Zip protein [Medicago truncatula]
 gi|355492678|gb|AES73881.1| Class III HD-Zip protein [Medicago truncatula]
          Length = 834

 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 162/754 (21%), Positives = 285/754 (37%), Gaps = 187/754 (24%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 19  KYVRYTPEQVEALERLYHECPKPTSLRRQQLIRECPILSHIEPKQIKVWFQNRRCREKQR 78

Query: 149 HE----RHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            E    +  N +L   N+ L  +N R ++ +S                     HL  EN 
Sbjct: 79  KEAGRLQAVNRKLTAMNKLLMEENDRLQKQVS---------------------HLVYENT 117

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL 264
             R+     +                           LA  +   +  +  G+ +     
Sbjct: 118 FFRQHTQNTT---------------------------LATTDTSCESVVTSGQQH----- 145

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRG 324
                 P +A    ++ +A   + E +  A            GTA    +   ++  P  
Sbjct: 146 ----PQPRDASPAGLLSIAEETLAEFLSKAT-----------GTAVEWVQMPGMKPGPDS 190

Query: 325 IG--PKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVA 382
           IG      G    A+R   +V +    + EIL D   W            T++VL+    
Sbjct: 191 IGIVAISHGSPGVAARACGLVGLEPARVAEILKDRLSW-------YRDCRTVDVLNVMST 243

Query: 383 GNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA----- 437
           GN  G ++++  +   P+ L P R+ + +RY     +G+  V + SL+N +  P+     
Sbjct: 244 GN-GGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNTQNGPSMPPVP 302

Query: 438 --VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATL 495
             VR    PSG LI+    G S +  V+H+ ++   V  + + L  +      +  +A L
Sbjct: 303 HFVRAEVLPSGYLIRPCEGGGSIIHIVDHMLLEPWSVPEVLRPLYESSMLLAQRTTMAAL 362

Query: 496 DRQCERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTL 553
            R   +++  ++    TG         GR+  ++  L++R+   F   V+  T   W+ L
Sbjct: 363 -RHLRQISQEVSQPSVTGW--------GRRPAALRALSQRLSKGFNEAVNGFTDDGWSML 413

Query: 554 SGTGADDVRVMTRKSVDDPGRPPGI--------------VLSAATSFWLP-VPPKRVFDF 598
              G DDV ++   S   P +  G+              VL A  S  L  VPP  +  F
Sbjct: 414 DSDGIDDVTLLVNSS---PSKMMGLNLGYNNGFPSVTSSVLCAKASMLLQNVPPAILLRF 470

Query: 599 LRDENTRSEWDILS------------------------NGGVVQEMAHIANGRDTGNCVS 634
           LR+   RSEW   S                         G V+  +AH     +    + 
Sbjct: 471 LREH--RSEWADTSIDAYSAAAIKAGPCSLPGARTGAFGGQVILPLAHTIEHEEFMEVIK 528

Query: 635 LLRVNCLQSANSSQSNMLILQ-----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVA 689
           L  +   +   +   ++ +LQ     +     T++ +I+AP+D             D   
Sbjct: 529 LENMGYYRDDMTMPGDIFLLQLCSGVDEHAVGTSAELIFAPID---------ASFSDDAP 579

Query: 690 LLPSGFAILP------------------------DGTSLHGANIGEAASGGSLLTVAFQI 725
           +LPSGF I+P                         G    G N G +    S++T+AFQ 
Sbjct: 580 ILPSGFRIIPLESGTDAASPNRTLDLASALEVGTTGNKAGGDNSGHSGITKSVMTIAFQF 639

Query: 726 LVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
             ++     ++  +   V +++A +V+R+  +LS
Sbjct: 640 AFEAHLQDNIAAMARQYVRSIVA-SVQRVSLALS 672


>gi|356522964|ref|XP_003530112.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 841

 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 119/543 (21%), Positives = 218/543 (40%), Gaps = 103/543 (18%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E+++L+  N KL A N    E                            EN RL++
Sbjct: 75  -QRKESSRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 105

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      +      N    +   P++       +   +  +  G+ +     L + 
Sbjct: 106 QVSQLVYENGYFRQHTTQN----TKQQPTK-------DTSCESAVTSGQQHN----LTTQ 150

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 151 HPPRDASPAGLLSIAEETLAEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGIV 199

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W             ++VL+     N  
Sbjct: 200 AISHSCTGVAARACGLVGLEPTRVAEILKDRPLW-------FQDCRAVDVLNVLPTAN-G 251

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  + + SL N +  P+       VR
Sbjct: 252 GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPSMPPVQHFVR 311

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H+ ++   V  + + L  +      K  +  L R  
Sbjct: 312 AEMLPSGYLIRPCEGGGSIIHIVDHMNLEPWSVPEVLRPLYESSTVLAQKTSIVAL-RHL 370

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            +++  ++ +  TG         GR+  ++  L++R+   F   ++  T   WTT+   G
Sbjct: 371 RQISHEVSQSNVTGW--------GRRPAALRALSQRLSRGFNEALNGFTDEGWTTIGNDG 422

Query: 558 ADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            DDV ++   S D             P     ++ + A+     VPP  +  FLR+   R
Sbjct: 423 VDDVTILVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREH--R 480

Query: 606 SEW 608
           SEW
Sbjct: 481 SEW 483


>gi|89514841|gb|ABD75295.1| class III homeodomain-leucine zipper protein C3HDZ1 [Marchantia
           polymorpha]
          Length = 860

 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 176/761 (23%), Positives = 291/761 (38%), Gaps = 181/761 (23%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L ++      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTNEQVEALERVYNECPKPSSIRRQQLIKDCPILANIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADN---MRYREALSNASCPNCGGPTAIGEMSFDEHHLRLE--- 202
            +R E T+L + N KL A N   M   E LS  +           +++ +  +LR     
Sbjct: 75  -QRKEATRLLSVNAKLTALNKLLMEENERLSKHT----------SQLAIENQYLRQHTSS 123

Query: 203 ------NARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGG 256
                 N RL E+    +   +    + VV   L   P P  P                 
Sbjct: 124 DRNLKPNRRLHEQAGMATPDTSS---ESVVTGGLQRHPTPQHP----------------- 163

Query: 257 EMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDE 316
                         P +A    ++ +A   + E +  A            GTA    +  
Sbjct: 164 --------------PRDASPAGLLAIAEETLTEFLAKAT-----------GTAIDWIQMP 198

Query: 317 YVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTL 374
            ++  P  IG       C   A+R   +V +    + ++L D   W       +     L
Sbjct: 199 GMKPGPDSIGIVAISHGCAGVAARACGLVGLEPTKVADVLKDRPAW-------LRDCRRL 251

Query: 375 EVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP 434
           +VL     GN  G ++++  +   P+ L P R+   +RY     +G   + + SL     
Sbjct: 252 DVLGAFPTGN-GGTVELIYTQMYAPTTLAPARDFCTLRYTSFLEDGNLVICERSLSGAHG 310

Query: 435 SPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFG 487
           +P        VR    PSG LI+    G   +  V+H++++   V  + + L  +     
Sbjct: 311 APTMPPVQFFVRAEMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVLRPLYESSAVLA 370

Query: 488 AKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSAST 546
            K  +  L R   RLA      IP GEV  +   D + ++L+ L++R+   F   V+   
Sbjct: 371 QKMTIGAL-RHLRRLAQ----EIP-GEV--VLGSDQQPAVLRALSQRLARGFNEAVNGFA 422

Query: 547 AHTWTTLSGTGADDVRVMTRKSVDDP---GRP----------PGIVLSAATSFWLPVPPK 593
              WTTL   G DDV V+   + +     G P           GI+ + A+     VPP 
Sbjct: 423 DDGWTTLPSDGMDDVSVVVNPNPNSKQFGGGPNATDRLCSIGGGILCAKASMLLQNVPPA 482

Query: 594 RVFDFLRDENTRSEW------------------------DILSNGGVVQEMAHIANGRDT 629
            +  FLR+   RSEW                          L  G +   +AH     + 
Sbjct: 483 LLIRFLREH--RSEWADCEIDADAAAALRSTNYVGSESRGSLCGGQLPLPLAHAVEQEEF 540

Query: 630 GNCVSLLRVNCLQSA---NSSQSNMLIL----QESCTDPTASFVIYAPVDIVAMNVVLNG 682
              V L   +  Q     N S S +L L     E+     A  V +APVD+         
Sbjct: 541 LEVVKLEGHSPTQDGGVLNRSDSFLLQLCSGVDENAVGACAQLV-FAPVDVAVT------ 593

Query: 683 GDPDYVALLPSGFAILP------DG----------TSLHGAN----IGEAASGG----SL 718
              D V LL SGF ++P      DG          ++L G +    +G++ +      S+
Sbjct: 594 ---DDVPLLASGFRVIPLDSGIVDGYGLSRTLDLTSTLEGGSEARLVGDSGASACHLRSV 650

Query: 719 LTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           LT+AFQ   +      ++  +   V  ++A +V+R+  +L+
Sbjct: 651 LTIAFQFAFEVHTRDSVAAMARQYVRTVVA-SVQRVAMALA 690


>gi|449447807|ref|XP_004141659.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Cucumis
           sativus]
 gi|449480641|ref|XP_004155954.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Cucumis
           sativus]
          Length = 837

 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 146/666 (21%), Positives = 250/666 (37%), Gaps = 150/666 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A N    E                            EN RL++
Sbjct: 75  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 105

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      +                ++   L   +   +P +  G+       L S 
Sbjct: 106 QVSQLVYENGYFRQH-------------TQSTTLGAKDTSCEPVVTSGQHN-----LTSQ 147

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 148 HPPRDASPAGLLSIAEETLTEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGIV 196

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W             ++VL+     N  
Sbjct: 197 AISHGCPGVAARACGLVGLEPTRVAEILKDQPSW-------FRDCRAVDVLNVLPTAN-G 248

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  + + SL N +  P        VR
Sbjct: 249 GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPTMPPVQHFVR 308

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L RQ 
Sbjct: 309 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTMAAL-RQL 367

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            ++A  ++ +  TG         GR+  ++  L +R+   F   ++      W+ +   G
Sbjct: 368 RQIAHEVSQSNVTGW--------GRRPAALRSLGQRLTRGFNEALNGFNDEGWSVMGNDG 419

Query: 558 ADDVRVMTRKSVDDPGRPPGIVLSAATSF---------------WLPVPPKRVFDFLRDE 602
            DDV ++   S   P +  G+ +S A  F                  VPP  +  FLR+ 
Sbjct: 420 MDDVTILVNSS---PDKLMGLNISFANGFSAISNAVLCARASMLLQNVPPAILLRFLREH 476

Query: 603 NTRSEW-----DILSNGG-------------------VVQEMAHIANGRDTGNCVSLLRV 638
             RSEW     D  S                      V+  +AH     +    + L  +
Sbjct: 477 --RSEWADNNIDAYSAAAVKVGPWSLPGSRVGSFGNQVILPLAHTIEHEEFLEVIKLEGI 534

Query: 639 NCLQSANSSQSNMLILQ-----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPS 693
                       M +LQ     +     T + +I+AP+D             D   LLPS
Sbjct: 535 GHTPEDAMMPREMFLLQLCSGMDENAIGTCAELIFAPID---------ASFADDAPLLPS 585

Query: 694 GFAILP 699
           GF I+P
Sbjct: 586 GFRIIP 591


>gi|356522958|ref|XP_003530109.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 838

 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 158/746 (21%), Positives = 285/746 (38%), Gaps = 167/746 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E+++L+  N KL A N    E                            EN RL++
Sbjct: 75  -QRKESSRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 105

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      +     +                A  +   +  +  G+ +     L + 
Sbjct: 106 QVSQLVYENGYFRQHTQITTQ-------------ATKDTNCESVVTSGQQHN----LITQ 148

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 149 HPPRDASPAGLLSIAEETLAEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGIV 197

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W             ++VL+     N  
Sbjct: 198 AISHGCTGVAARACGLVGLEPTRVAEILKDQPLW-------FRDCRAVDVLNVLPTAN-G 249

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  + + SL N +  P+       VR
Sbjct: 250 GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPSMPPVQHFVR 309

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L R  
Sbjct: 310 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RHL 368

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            +++  ++ +  TG         GR+  ++  L++R+   F   ++  T   WTT+   G
Sbjct: 369 RQISHEVSQSNVTGW--------GRRPAALRALSQRLSRGFNEALNGFTDEGWTTIGNDG 420

Query: 558 ADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            DDV ++   S D             P     ++ + A+     VPP  +  FLR+   R
Sbjct: 421 VDDVTILVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREH--R 478

Query: 606 SEW-----DILS-------------------NGGVVQEMAHIANGRDTGNCVSLLRVNCL 641
           SEW     D  +                    G V+  +AH     +    + L  +   
Sbjct: 479 SEWADNNMDAYTAAAIKVGPCSLSGSRVGNYGGQVILPLAHTIEHEEFLEVIKLEGIAHS 538

Query: 642 QSANSSQSNMLILQ-----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFA 696
                    M +LQ     +     T + +I AP+D             D   LLPSGF 
Sbjct: 539 PEDTIMPREMFLLQLCSGMDENAVGTCAELISAPID---------ASFADDAPLLPSGFR 589

Query: 697 ILP---------------DGTSLHGANIGEAASGG--------SLLTVAFQILVDSVPTA 733
           I+P                 ++L     G  AS G        S++T+AF+   +S    
Sbjct: 590 IIPLESGKEASSPNRTLDLASALDVGPSGNRASNGCANSSCMRSVMTIAFEFAFESHMQE 649

Query: 734 KLSLGSVATVNNLIACTVERIKASLS 759
            ++  +   V ++I+ +V+R+  +LS
Sbjct: 650 HVASMARQYVRSIIS-SVQRVALALS 674


>gi|18076736|emb|CAC84906.1| HD-Zip protein [Zinnia violacea]
          Length = 835

 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 158/669 (23%), Positives = 266/669 (39%), Gaps = 163/669 (24%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 16  KYVRYTTEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 73

Query: 149 HERHENTQLRTENEKLRA-------DNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRL 201
            +R E+++L+T N+KL A       +N R ++ +S   C                     
Sbjct: 74  -QRKESSRLQTVNKKLSAMNKLLMEENDRLQKQVSQLVC--------------------- 111

Query: 202 ENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGA 261
           EN  +R+++   SA A     + VVN P  S                             
Sbjct: 112 ENGYMRQQMHTGSA-ATDASCESVVNTPQHS----------------------------- 141

Query: 262 ADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF 321
              LR  + P       ++ +A   + E +  A            GTA    +   ++  
Sbjct: 142 ---LRDATNPAG-----LLSIAEETLAEFLSKAT-----------GTAVDWVQMPGMKPG 182

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  +G       C   A+R   +V +    +VEIL D   W            +LEV + 
Sbjct: 183 PDSVGIFAISQSCSGVAARACGLVSLEPTKIVEILKDRPSW-------FRDCRSLEVFTM 235

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN--LRPSPA 437
             AGN  G ++++  +   P+ L P R+ + +RY      G+  V + SL      P+PA
Sbjct: 236 FPAGN-GGTIELVYMQTFAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSGSGAGPNPA 294

Query: 438 -----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                VR    PSG LI+    G S +  V+H+ ++   V  + + L  +      K  +
Sbjct: 295 AVAQFVRGEMLPSGYLIRPCEGGGSVIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTI 354

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTW 550
           A L R   ++A   +  +  G         GR+   +  L++R+   F   ++  +   W
Sbjct: 355 AAL-RYIRQIAQESSGEVVYGL--------GRQPAVLRTLSQRLSRGFNDAINGFSDDGW 405

Query: 551 TTLSGTGADDV--RVMTRKSVDDPGRPP-------GIVLSAATSFWLPVPPKRVFDFLRD 601
           + ++  G +DV   V + K++++   P        GI+ + A+  +  VPP  +  FLR+
Sbjct: 406 SLMNCDGVEDVIIAVNSTKNLNNSMNPSNSISYLGGILCAKASMLFQDVPPAVLVRFLRE 465

Query: 602 ENTRSEW-----DILSNGGVVQEMAHIANG----RDTGNCVSL----------------L 636
              RSEW     D  S   V     +   G    R TG+ + +                L
Sbjct: 466 H--RSEWADFNVDAYSAASVKANSCNTYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRL 523

Query: 637 RVNCLQSANSSQSNMLILQESCT--DPTA----SFVIYAPVDIVAMNVVLNGGDPDYVAL 690
             + L   +   S  + L + C   D  A    S +++AP+D +          PD   L
Sbjct: 524 EGHALGQEDPFTSRDIHLLQLCNGIDENAVGACSELVFAPIDEMF---------PDDAPL 574

Query: 691 LPSGFAILP 699
           +PSGF I+P
Sbjct: 575 VPSGFRIIP 583


>gi|89514873|gb|ABD75311.1| class III homeodomain-leucine zipper protein C3HDZ1 [Taxus globosa]
          Length = 837

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 171/769 (22%), Positives = 291/769 (37%), Gaps = 182/769 (23%)

Query: 75  NHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLE 130
           N EG +  D         +Y R+T  Q++ +E  + ECP P   +R++L RE      +E
Sbjct: 3   NKEGKNSMD-------TSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 55

Query: 131 PLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIG 190
           P Q+K WFQN+R + K   +R E ++L+T N KL A N    E                 
Sbjct: 56  PKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEEND-------------- 98

Query: 191 EMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNY-PLLSPPVPSRPLELAVGNFGA 249
            +      L  EN  +R+++   S        + VV        P P  PL         
Sbjct: 99  RLQKQVSQLVYENGYMRQQLQNASVATTDTSCESVVTSGQHQHNPTPQHPLR-------- 150

Query: 250 QPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTA 309
                                  +A    ++ +A   + E +  A            GTA
Sbjct: 151 -----------------------DASPAGLLSIAEETLAEFLLKAT-----------GTA 176

Query: 310 AVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGI 367
               +   ++  P  IG       C   A+R   +V +    + EIL D   W       
Sbjct: 177 VDWVQMPGMKPGPDSIGIVAISHSCTGVAARACGLVGLEPTKVAEILKDRPSW------- 229

Query: 368 VSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDV 427
           +     L+VL+    GN  G ++++  +   P+ L   R+ + +RY     +G+  V + 
Sbjct: 230 LRDCRCLDVLTAFPTGN-GGTIELLYMQTYAPTTLASARDFWTLRYTTVLEDGSLVVCER 288

Query: 428 SLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLV 480
           SL++ +  P+       VR    PSG LI+    G S +  V+H++++   V  + + L 
Sbjct: 289 SLNSTQGGPSMPPVPHFVRAEMLPSGYLIRPCEGGGSIIRIVDHMDLEPWSVPEVLRPLY 348

Query: 481 STGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFC 539
            +      K  +A L R+  ++A  +     TGEV  +     + ++L+  ++R+   F 
Sbjct: 349 ESSTILAQKMTIAAL-RRLRQIAQEV-----TGEV--VFGWGRQPAVLRTFSQRLSRGFN 400

Query: 540 AGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGR---------------PPGIVLSAAT 584
             V+  T   W+++   G +DV ++   S   P +                 GI+ + A+
Sbjct: 401 EAVNGFTDDGWSSMGSDGVEDVTIVINSS---PSKLVGSQVNSSNGLTTLGGGILCAKAS 457

Query: 585 SFWLPVPPKRVFDFLRDENTRSEWDILS--------------------NGG-----VVQE 619
                VPP  +  FLR+   RSEW   S                     GG     V+  
Sbjct: 458 MLLQNVPPALLVRFLREH--RSEWADCSMDAYSAAALKASPYCLPGSRAGGFSGSQVILP 515

Query: 620 MAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQ------ESCTDPTASFVIYAPVDI 673
           +AH     +    + L      Q       +M +LQ      ES     A  V +AP+D 
Sbjct: 516 LAHTVEHEEFLEVIKLEGHGLTQEEAVLSRDMFLLQLCSGIDESAAGACAQLV-FAPID- 573

Query: 674 VAMNVVLNGGDPDYVALLPSGFAILP---------------DGTSLHGANIGEAASGG-- 716
                       D   LLPSGF ++P                 ++L   + G  ASG   
Sbjct: 574 --------ESFADDAPLLPSGFRVIPLESRTVSAGANRTLDLASALEVGSTGSRASGDSG 625

Query: 717 ------SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
                 S+LT+AFQ   ++     ++  +   V +++A +V+R+  +L+
Sbjct: 626 ANSNLRSVLTIAFQFTYENHLRENVAAMARQYVRSVVA-SVQRVAMALA 673


>gi|110349528|gb|ABG73239.1| class III HD-Zip protein HB14 [Physcomitrella patens]
          Length = 875

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 187/767 (24%), Positives = 301/767 (39%), Gaps = 151/767 (19%)

Query: 84  QEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQVKFWFQ 139
           +EQ  +   +Y R+T  Q++ +E  + ECP P   +R +L +E      +EP Q+K WFQ
Sbjct: 6   KEQTMDASGKYVRYTNEQVEALERVYHECPKPSSVRRHQLIKESPILANIEPKQIKVWFQ 65

Query: 140 NKRTQMKTQHERHENTQLRTENEKLRADN---MRYREALSNASCPNCGGPTAIGEMSFDE 196
           N+R + K   +R E T+L + N KL A N   M   E L+  +                 
Sbjct: 66  NRRCREK---QRKEATRLVSVNAKLTALNKLLMEENERLAKHT----------------- 105

Query: 197 HHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSR-PLEL-AVGNFGAQPGIG 254
             L LEN  LR++I             P + +P     +PS  PL++    N G +    
Sbjct: 106 SQLTLENHALRQQI-------------PNLPFPDGRHRLPSHSPLKIEGAVNGGDESSTQ 152

Query: 255 GGEMYGAADLLRSISAPTEADKPMIIELAVAAMEE----------LIRMAQMGEPLWMTS 304
           GG            S  T  D  +   L      +          L+  A+     ++  
Sbjct: 153 GGICVKLPGQAGVASTDTSCDSAVTGGLPHRVTPQHSPRDTSPAGLLATAEETLTEFLAK 212

Query: 305 LDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWST 362
             GTA    +   ++  P  IG       C   A+R   +V ++   + E+L D   W  
Sbjct: 213 ATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACGLVALDASKVTEVLKDRPAW-- 270

Query: 363 VFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTW 422
                +     +EVL      N  G ++++  +   P+ L P R+   +RY     +G  
Sbjct: 271 -----LQDCRRMEVLGALSTAN-GGTIELLYTQMYAPTTLAPARDYCTLRYTTILEDGNL 324

Query: 423 AVVDVSL------DNLRPSPA-VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNL 475
            + + SL        + P  + VR     SG LI+    G   +  V+H + +   V  +
Sbjct: 325 VICERSLTGGQGGHTMPPVQSFVRGEMYSSGYLIRPCEGGGCIIHVVDHYDKEPWRVPEV 384

Query: 476 YKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMV 535
            + L  +      K  +  L R   RLA+       +GE GV  N      +  L +R+ 
Sbjct: 385 LRPLYESPAVLAQKSTIGAL-RHLRRLAAE-----ESGE-GVPRNGHHPAVLRILGQRLT 437

Query: 536 ISFCAGVSASTAHTWTTLSGTGADDVRVM---TRKSVDDP--------GRPPGIVLSAAT 584
             F   V+      W T    G DDV VM   T KS++              GI+ + A+
Sbjct: 438 KGFNDAVNGFGDDGWETTVTDGLDDVSVMVNATPKSMEGQIASDKLLYSLGGGILCAKAS 497

Query: 585 SFWLPVPPKRVFDFLRDENTRSEW---------DILSNG-GVVQEMAHIANGR------D 628
                VPP  +  FLR+   RSEW            SNG G V     +++ +       
Sbjct: 498 MLLQNVPPSLLIRFLREH--RSEWADYDMDDMASFRSNGNGYVPRGGGVSHVQLPLPLAQ 555

Query: 629 TGNCVSLLRVNCLQSANSSQSNML----ILQESCT--DPTA----SFVIYAPVDIVAMNV 678
           +G C  +L V  L+  +S Q  +L     L + C+  D +A    S +I+APVD+     
Sbjct: 556 SGECGEILEVVKLEGHSSVQHMVLSRDIFLLQLCSGIDESALGACSQLIFAPVDVALA-- 613

Query: 679 VLNGGDPDYVALLPSGFAILP------DG----------TSLHGAN-------IGEAASG 715
                  D + LLPSGF + P      DG          ++L G N       +   +S 
Sbjct: 614 -------DGIPLLPSGFCVSPIDTNVVDGFGLDRTLDLASTLEGGNDLRLNGDVKSNSSS 666

Query: 716 G---SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           G   S+LT+AFQ   +      ++  +   V  ++A +V+R+  +L+
Sbjct: 667 GQMRSVLTIAFQFAYEVHTRETVAAMARQYVRTVVA-SVQRVAMALA 712


>gi|82908746|gb|ABB93543.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908758|gb|ABB93549.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908766|gb|ABB93553.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908776|gb|ABB93558.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908792|gb|ABB93566.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908814|gb|ABB93577.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908824|gb|ABB93582.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908842|gb|ABB93591.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
          Length = 842

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 167/749 (22%), Positives = 282/749 (37%), Gaps = 170/749 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                  +      L  EN  +R+
Sbjct: 76  -QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSQLVYENGYMRQ 120

Query: 209 EIDRISAIAAKYVGKPVVNY-PLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
           ++   S  A     + VV        P P  P                            
Sbjct: 121 QLQNASVAATDTSCESVVTSGQHQHNPTPQHP---------------------------- 152

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
              P +A    ++ +A   + E +  A+     W+  + G          ++  P  IG 
Sbjct: 153 ---PRDASPAGLLSIAEETLAEFLSKAKGAAVDWV-QMPG----------MKPGPDSIGI 198

Query: 328 KPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                 C   A+R   +V ++   + EIL D   W       +     L+VL+    GN 
Sbjct: 199 VAISNTCNGVAARACGLVGLDPTKVAEILKDRPSW-------LRDCRCLDVLTAFPTGN- 250

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------V 438
            G ++++  +    + L   R+ + +RY     +G+  V + SL   +  P+       V
Sbjct: 251 GGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHFV 310

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R    PSG LIQ    G S +  V+H++++   V  + + L  +      K  +A L R+
Sbjct: 311 RAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAAL-RR 369

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTG 557
             ++A        TGEV  +     + ++L+  ++R+   F   V+  T   W+ L   G
Sbjct: 370 LRQIAQEA-----TGEV--VFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLLGSDG 422

Query: 558 ADDVRVMTRKSVDDPGRPP------------GIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            +DV +    S +                  GI+ + A+     VPP  +  FLR+   R
Sbjct: 423 VEDVTIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREH--R 480

Query: 606 SEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           SEW                            S   V+  +AH     +    + L     
Sbjct: 481 SEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGL 540

Query: 641 LQSANSSQSNMLILQ------ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
            Q       +M +LQ      E+     A  V +AP+D             D   LLPSG
Sbjct: 541 TQEEAVLSRDMFLLQLCSGIDENAAGACAELV-FAPID---------ESFADDAPLLPSG 590

Query: 695 FAILP-----DGT-----SLHGANIGEAASGG--------------SLLTVAFQILVDSV 730
           F ++P     DG+     +L  A+  E  S G              S+LT+AFQ   +S 
Sbjct: 591 FRVIPLESRTDGSGGPNRTLDLASALEVGSAGTRTSGDSGTNSNLRSVLTIAFQFTYESH 650

Query: 731 PTAKLSLGSVATVNNLIACTVERIKASLS 759
               ++  +   V +++A +V+R+  +L+
Sbjct: 651 LRENVAAMARQYVRSVVA-SVQRVAMALA 678


>gi|317160480|gb|ADV04322.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 842

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 167/749 (22%), Positives = 282/749 (37%), Gaps = 170/749 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                  +      L  EN  +R+
Sbjct: 76  -QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSQLVYENGYMRQ 120

Query: 209 EIDRISAIAAKYVGKPVVNY-PLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
           ++   S  A     + VV        P P  P                            
Sbjct: 121 QLQNASVAATDTSCESVVTSGQHQHNPTPQHP---------------------------- 152

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
              P +A    ++ +A   + E +  A+     W+  + G          ++  P  IG 
Sbjct: 153 ---PRDASPAGLLSIAEETLAEFLSKAKGAAVDWV-QMPG----------MKPGPDSIGI 198

Query: 328 KPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                 C   A+R   +V ++   + EIL D   W       +     L+VL+    GN 
Sbjct: 199 VAISNTCNGVAARACGLVGLDPTKVAEILKDRPSW-------LRDCRCLDVLTAFPTGN- 250

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------V 438
            G ++++  +    + L   R+ + +RY     +G+  V + SL   +  P+       V
Sbjct: 251 GGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHFV 310

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R    PSG LIQ    G S +  V+H++++   V  + + L  +      K  +A L R+
Sbjct: 311 RAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAAL-RR 369

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTG 557
             ++A        TGEV  +     + ++L+  ++R+   F   V+  T   W+ L   G
Sbjct: 370 LRQIAQEA-----TGEV--VFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLLGSDG 422

Query: 558 ADDVRVMTRKSVDDPGRPP------------GIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            +DV +    S +                  GI+ + A+     VPP  +  FLR+   R
Sbjct: 423 VEDVTIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREH--R 480

Query: 606 SEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           SEW                            S   V+  +AH     +    + L     
Sbjct: 481 SEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGL 540

Query: 641 LQSANSSQSNMLILQ------ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
            Q       +M +LQ      E+     A  V +AP+D             D   LLPSG
Sbjct: 541 TQEEAVLSRDMFLLQLCSGIDENAAGACAELV-FAPID---------ESFADDAPLLPSG 590

Query: 695 FAILP-----DGT-----SLHGANIGEAASGG--------------SLLTVAFQILVDSV 730
           F ++P     DG+     +L  A+  E  S G              S+LT+AFQ   +S 
Sbjct: 591 FRVIPLESRTDGSGGPNRTLDLASALEVGSAGARTSGDSGANSNLRSVLTIAFQFTYESH 650

Query: 731 PTAKLSLGSVATVNNLIACTVERIKASLS 759
               ++  +   V +++A +V+R+  +L+
Sbjct: 651 LRENVAAMARQYVRSVVA-SVQRVAMALA 678


>gi|225442503|ref|XP_002284014.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like isoform 3
           [Vitis vinifera]
          Length = 854

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 169/767 (22%), Positives = 293/767 (38%), Gaps = 192/767 (25%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 16  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 73

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A N    E                            EN RL++
Sbjct: 74  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 104

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y  +   N              LA  +   +  +  G+ +     L   
Sbjct: 105 QVSQL-VYENGYFRQHTQN------------TTLATKDTSCESVVTSGQHH-----LTPQ 146

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 147 HPPRDASPAGLLSIAEETLTEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGIV 195

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W             ++VL+     N  
Sbjct: 196 AISHGCTGVAARACGLVGLEPTRVAEILKDRPSW-------FRDCRAVDVLNVLPTAN-G 247

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  V + SL N +  P+       VR
Sbjct: 248 GTIELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSMPPVQHFVR 307

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L RQ 
Sbjct: 308 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQL 366

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            ++A  ++ +  TG         GR+  ++  L++R+   F   ++  T   W+ +   G
Sbjct: 367 RQIAQEVSQSNVTGW--------GRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDG 418

Query: 558 ADDVRVMTRKSVDDPGRPPGIVLSAATSF------------------------------- 586
            DDV ++   S   P +  G+ LS A  F                               
Sbjct: 419 IDDVTILVNSS---PEKLTGLNLSFANGFPAVSNAVLCAKASMLLQVSFISCSDVLFTIY 475

Query: 587 -WLPVPPKRVFDFLRDENTRSEW-----DILSNGG-------------------VVQEMA 621
            +  VPP  +  FLR+   RSEW     D  S                      V+  +A
Sbjct: 476 HFQNVPPAILLRFLREH--RSEWADNNIDAYSAAAVKVGPCSLPGSRVGSFGSQVILPLA 533

Query: 622 HIANGRDTGNCVSLLRV-NCLQSANSSQSNMLILQESCTDP----TASFVIYAPVDIVAM 676
           H     +    + L  V +C + A   +   L+   S  D     T + +I+AP+D    
Sbjct: 534 HTIEHEEFLEVIKLEGVGHCPEDAMMPRDMFLLQLCSGMDENAVGTCAELIFAPID---- 589

Query: 677 NVVLNGGDPDYVALLPSGFAILPDGTSLHGAN------------IGEAA---------SG 715
                    D   LLPSGF I+P  +    ++            IG A          +G
Sbjct: 590 -----ASFADDAPLLPSGFRIIPLDSGKEASSPNRTLDLASALEIGPAGNRSSNDYSVNG 644

Query: 716 G---SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           G   S++T+AF+   +S     ++  +   V ++I+ +V+R+  +LS
Sbjct: 645 GNTRSVMTIAFEFAFESHLQENVASMARQYVRSIIS-SVQRVALALS 690


>gi|82908650|gb|ABB93495.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908654|gb|ABB93497.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908656|gb|ABB93498.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908658|gb|ABB93499.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908660|gb|ABB93500.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908662|gb|ABB93501.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908664|gb|ABB93502.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908666|gb|ABB93503.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908668|gb|ABB93504.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908670|gb|ABB93505.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908672|gb|ABB93506.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908674|gb|ABB93507.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908676|gb|ABB93508.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908678|gb|ABB93509.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908680|gb|ABB93510.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908682|gb|ABB93511.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908684|gb|ABB93512.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908686|gb|ABB93513.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908688|gb|ABB93514.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908690|gb|ABB93515.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908692|gb|ABB93516.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908694|gb|ABB93517.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908696|gb|ABB93518.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908698|gb|ABB93519.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908700|gb|ABB93520.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908702|gb|ABB93521.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908704|gb|ABB93522.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908706|gb|ABB93523.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908708|gb|ABB93524.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908710|gb|ABB93525.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908712|gb|ABB93526.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908714|gb|ABB93527.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908716|gb|ABB93528.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908718|gb|ABB93529.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908720|gb|ABB93530.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908722|gb|ABB93531.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908724|gb|ABB93532.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908726|gb|ABB93533.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908728|gb|ABB93534.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908730|gb|ABB93535.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908732|gb|ABB93536.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908734|gb|ABB93537.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908736|gb|ABB93538.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908738|gb|ABB93539.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908740|gb|ABB93540.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908742|gb|ABB93541.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908744|gb|ABB93542.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908748|gb|ABB93544.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908750|gb|ABB93545.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908752|gb|ABB93546.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908754|gb|ABB93547.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908756|gb|ABB93548.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908760|gb|ABB93550.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908762|gb|ABB93551.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908764|gb|ABB93552.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908768|gb|ABB93554.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908770|gb|ABB93555.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908772|gb|ABB93556.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908774|gb|ABB93557.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908778|gb|ABB93559.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908780|gb|ABB93560.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908782|gb|ABB93561.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908784|gb|ABB93562.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908786|gb|ABB93563.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908788|gb|ABB93564.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908790|gb|ABB93565.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908794|gb|ABB93567.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908796|gb|ABB93568.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908798|gb|ABB93569.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908800|gb|ABB93570.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908802|gb|ABB93571.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908804|gb|ABB93572.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908806|gb|ABB93573.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908808|gb|ABB93574.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908810|gb|ABB93575.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908812|gb|ABB93576.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908816|gb|ABB93578.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908818|gb|ABB93579.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908820|gb|ABB93580.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908822|gb|ABB93581.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908826|gb|ABB93583.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908828|gb|ABB93584.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908830|gb|ABB93585.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908832|gb|ABB93586.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908834|gb|ABB93587.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908836|gb|ABB93588.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908838|gb|ABB93589.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908840|gb|ABB93590.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908844|gb|ABB93592.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82909691|gb|ABB94009.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909693|gb|ABB94010.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909695|gb|ABB94011.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909697|gb|ABB94012.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909699|gb|ABB94013.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909701|gb|ABB94014.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909703|gb|ABB94015.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909705|gb|ABB94016.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909707|gb|ABB94017.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909709|gb|ABB94018.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909711|gb|ABB94019.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909713|gb|ABB94020.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909715|gb|ABB94021.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909717|gb|ABB94022.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909719|gb|ABB94023.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909721|gb|ABB94024.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909723|gb|ABB94025.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909725|gb|ABB94026.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909727|gb|ABB94027.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909729|gb|ABB94028.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909731|gb|ABB94029.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909733|gb|ABB94030.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909737|gb|ABB94032.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909739|gb|ABB94033.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909741|gb|ABB94034.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909743|gb|ABB94035.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909745|gb|ABB94036.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909747|gb|ABB94037.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909749|gb|ABB94038.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909751|gb|ABB94039.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909753|gb|ABB94040.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909755|gb|ABB94041.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909757|gb|ABB94042.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909759|gb|ABB94043.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909761|gb|ABB94044.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909763|gb|ABB94045.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909765|gb|ABB94046.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909767|gb|ABB94047.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909769|gb|ABB94048.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909771|gb|ABB94049.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909773|gb|ABB94050.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909775|gb|ABB94051.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909777|gb|ABB94052.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909779|gb|ABB94053.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909781|gb|ABB94054.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909783|gb|ABB94055.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909785|gb|ABB94056.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909787|gb|ABB94057.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909789|gb|ABB94058.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909791|gb|ABB94059.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909793|gb|ABB94060.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909795|gb|ABB94061.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909797|gb|ABB94062.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909799|gb|ABB94063.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909801|gb|ABB94064.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909803|gb|ABB94065.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909805|gb|ABB94066.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909807|gb|ABB94067.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909809|gb|ABB94068.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909811|gb|ABB94069.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909813|gb|ABB94070.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909815|gb|ABB94071.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909817|gb|ABB94072.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909819|gb|ABB94073.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909821|gb|ABB94074.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909823|gb|ABB94075.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909825|gb|ABB94076.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909827|gb|ABB94077.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909829|gb|ABB94078.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909831|gb|ABB94079.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909833|gb|ABB94080.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909835|gb|ABB94081.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909837|gb|ABB94082.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909839|gb|ABB94083.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909841|gb|ABB94084.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909843|gb|ABB94085.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909845|gb|ABB94086.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909847|gb|ABB94087.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909849|gb|ABB94088.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909851|gb|ABB94089.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909853|gb|ABB94090.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909855|gb|ABB94091.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909857|gb|ABB94092.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909859|gb|ABB94093.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909861|gb|ABB94094.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909863|gb|ABB94095.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909865|gb|ABB94096.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909867|gb|ABB94097.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909869|gb|ABB94098.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909873|gb|ABB94100.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909875|gb|ABB94101.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909877|gb|ABB94102.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909879|gb|ABB94103.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909881|gb|ABB94104.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909883|gb|ABB94105.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909885|gb|ABB94106.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909887|gb|ABB94107.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909889|gb|ABB94108.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909891|gb|ABB94109.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909893|gb|ABB94110.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909895|gb|ABB94111.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909897|gb|ABB94112.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909899|gb|ABB94113.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909901|gb|ABB94114.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909903|gb|ABB94115.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909905|gb|ABB94116.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909907|gb|ABB94117.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909909|gb|ABB94118.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909911|gb|ABB94119.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909913|gb|ABB94120.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909915|gb|ABB94121.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909917|gb|ABB94122.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909919|gb|ABB94123.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909921|gb|ABB94124.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909923|gb|ABB94125.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909925|gb|ABB94126.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909927|gb|ABB94127.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909929|gb|ABB94128.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
          Length = 842

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 167/749 (22%), Positives = 282/749 (37%), Gaps = 170/749 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                  +      L  EN  +R+
Sbjct: 76  -QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSQLVYENGYMRQ 120

Query: 209 EIDRISAIAAKYVGKPVVNY-PLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
           ++   S  A     + VV        P P  P                            
Sbjct: 121 QLQNASVAATDTSCESVVTSGQHQHNPTPQHP---------------------------- 152

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
              P +A    ++ +A   + E +  A+     W+  + G          ++  P  IG 
Sbjct: 153 ---PRDASPAGLLSIAEETLAEFLSKAKGAAVDWV-QMPG----------MKPGPDSIGI 198

Query: 328 KPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                 C   A+R   +V ++   + EIL D   W       +     L+VL+    GN 
Sbjct: 199 VAISNTCNGVAARACGLVGLDPTKVAEILKDRPSW-------LRDCRCLDVLTAFPTGN- 250

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------V 438
            G ++++  +    + L   R+ + +RY     +G+  V + SL   +  P+       V
Sbjct: 251 GGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHFV 310

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R    PSG LIQ    G S +  V+H++++   V  + + L  +      K  +A L R+
Sbjct: 311 RAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAAL-RR 369

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTG 557
             ++A        TGEV  +     + ++L+  ++R+   F   V+  T   W+ L   G
Sbjct: 370 LRQIAQEA-----TGEV--VFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLLGSDG 422

Query: 558 ADDVRVMTRKSVDDPGRPP------------GIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            +DV +    S +                  GI+ + A+     VPP  +  FLR+   R
Sbjct: 423 VEDVTIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREH--R 480

Query: 606 SEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           SEW                            S   V+  +AH     +    + L     
Sbjct: 481 SEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGL 540

Query: 641 LQSANSSQSNMLILQ------ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
            Q       +M +LQ      E+     A  V +AP+D             D   LLPSG
Sbjct: 541 TQEEAVLSRDMFLLQLCSGIDENAAGACAELV-FAPID---------ESFADDAPLLPSG 590

Query: 695 FAILP-----DGT-----SLHGANIGEAASGG--------------SLLTVAFQILVDSV 730
           F ++P     DG+     +L  A+  E  S G              S+LT+AFQ   +S 
Sbjct: 591 FRVIPLESRTDGSGGPNRTLDLASALEVGSAGTRTSGDSGANSNLRSVLTIAFQFTYESH 650

Query: 731 PTAKLSLGSVATVNNLIACTVERIKASLS 759
               ++  +   V +++A +V+R+  +L+
Sbjct: 651 LRENVAAMARQYVRSVVA-SVQRVAMALA 678


>gi|90110436|gb|ABD90520.1| class III homeodomain-leucine zipper [Marchantia polymorpha]
          Length = 860

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 178/756 (23%), Positives = 299/756 (39%), Gaps = 171/756 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L ++      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTNEQVEALERVYNECPKPSSIRRQQLIKDCPILANIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E T+L + N K                      PTA+ ++      L  EN RL +
Sbjct: 75  -QRKEATRLLSVNAK----------------------PTALNKL------LMEENERLSK 105

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLE----LAVGNFGAQPGIGGGEMYGAADL 264
              ++ AI  +Y+ +   +   L P   SR L     +A  +  ++  + GG       L
Sbjct: 106 HTSQL-AIENQYLRQHTSSERNLKP---SRRLHEQAGMATPDTSSESVVTGG-------L 154

Query: 265 LRSISA---PTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF 321
            R  +    P +A    ++ +A   + E +  A            GTA    +   ++  
Sbjct: 155 QRHPTPQHPPRDASPAGLLAIAEETLTEFLAKAT-----------GTAIDWIQMPGMKPG 203

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C   A+R   +V +    + ++L D   W       +     L+VL  
Sbjct: 204 PDSIGIVAISHGCAGVAARACGLVGLEPTKVADVLKDRPAW-------LRDCRRLDVLGA 256

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-- 437
              GN  G ++++  +   P+ L P R+   +RY     +G   + + SL     +P   
Sbjct: 257 FPTGN-GGTVELIYTQMYAPTTLAPARDFCALRYTSFLEDGNLVICERSLSGAHGAPTMP 315

Query: 438 -----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                VR    PSG LI+    G   +  V+H++++   V  + + L  +      K  +
Sbjct: 316 PVQFFVRAEMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVLRPLYESSAVLAQKMTM 375

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWT 551
             L R   RLA      IP GEV  +   D + ++L+ L++R+   F   V+      WT
Sbjct: 376 GAL-RHLRRLAQ----EIP-GEV--VLGSDQQPAVLRALSQRLARGFNEAVNGFADDGWT 427

Query: 552 TLSGTGADDVRVMTRKSVDDP---GRP----------PGIVLSAATSFWLPVPPKRVFDF 598
           TL   G DDV V+   + +     G P           GI+ + A+     VPP  +  F
Sbjct: 428 TLPSDGMDDVSVVVNPNPNSKQFGGGPNATDRLCSIGGGILCAKASMLLQNVPPALLIRF 487

Query: 599 LRDENTRSEW------------------------DILSNGGVVQEMAHIANGRDTGNCVS 634
           LR+   RSEW                          L  G +   +AH     +    V 
Sbjct: 488 LREH--RSEWADCEIDADAAAALRSTNYVGSESRGSLCGGQLPLPLAHAVEQEEFLEVVK 545

Query: 635 LLRVNCLQSA---NSSQSNMLIL----QESCTDPTASFVIYAPVDIVAMNVVLNGGDPDY 687
           L   +  Q     N S S +L L     E+     A  V +APVD+            D 
Sbjct: 546 LEGHSPTQDGGVLNRSDSFLLQLCSGVDENAVGACAQLV-FAPVDVAVT---------DD 595

Query: 688 VALLPSGFAILP------DG----------TSLHGAN----IGEAASGG----SLLTVAF 723
           V LL SGF ++P      DG          ++L G +    +G++ +      S+LT+AF
Sbjct: 596 VPLLASGFRVIPLDSGIVDGYGLSRTLDLTSTLEGGSEARLVGDSGASACHLRSVLTIAF 655

Query: 724 QILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           Q   +      ++  +   V  ++A +V+R+  +L+
Sbjct: 656 QFAFEVYTGDSVAAMARQYVRTVVA-SVQRVAMALA 690


>gi|82909871|gb|ABB94099.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
          Length = 842

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 167/749 (22%), Positives = 282/749 (37%), Gaps = 170/749 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                  +      L  EN  +R+
Sbjct: 76  -QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSQLVYENGYMRQ 120

Query: 209 EIDRISAIAAKYVGKPVVNY-PLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
           ++   S  A     + VV        P P  P                            
Sbjct: 121 QLQNASVAATDTSCESVVTSGQHQHNPTPQHP---------------------------- 152

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
              P +A    ++ +A   + E +  A+     W+  + G          ++  P  IG 
Sbjct: 153 ---PRDASPAGLLSIAEETLAEFLSKAKGAAVDWV-QMPG----------MKPGPDSIGI 198

Query: 328 KPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                 C   A+R   +V ++   + EIL D   W       +     L+VL+    GN 
Sbjct: 199 VAISNTCNGVAARACGLVGLDPTKVAEILKDRPSW-------LRDCRCLDVLTAFPTGN- 250

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------V 438
            G ++++  +    + L   R+ + +RY     +G+  V + SL   +  P+       V
Sbjct: 251 GGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHFV 310

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R    PSG LIQ    G S +  V+H++++   V  + + L  +      K  +A L R+
Sbjct: 311 RAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAAL-RR 369

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTG 557
             ++A        TGEV  +     + ++L+  ++R+   F   V+  T   W+ L   G
Sbjct: 370 LRQIAQEA-----TGEV--VFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLLGSDG 422

Query: 558 ADDVRVMTRKSVDDPGRPP------------GIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            +DV +    S +                  GI+ + A+     VPP  +  FLR+   R
Sbjct: 423 VEDVTIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREH--R 480

Query: 606 SEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           SEW                            S   V+  +AH     +    + L     
Sbjct: 481 SEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGL 540

Query: 641 LQSANSSQSNMLILQ------ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
            Q       +M +LQ      E+     A  V +AP+D             D   LLPSG
Sbjct: 541 TQEEAVLSRDMFLLQLCSGIDENAAGACAELV-FAPID---------ESFADDAPLLPSG 590

Query: 695 FAILP-----DGT-----SLHGANIGEAASGG--------------SLLTVAFQILVDSV 730
           F ++P     DG+     +L  A+  E  S G              S+LT+AFQ   +S 
Sbjct: 591 FRVIPLESRTDGSGGPNRTLDLASALEVGSAGTRTSGDSGANSNLRSVLTIAFQFTYESH 650

Query: 731 PTAKLSLGSVATVNNLIACTVERIKASLS 759
               ++  +   V +++A +V+R+  +L+
Sbjct: 651 LRENVAAMARQYVRSVVA-SVQRVAMALA 678


>gi|356526091|ref|XP_003531653.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 843

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 152/687 (22%), Positives = 253/687 (36%), Gaps = 147/687 (21%)

Query: 68  STKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL 127
           S K GS N  G   D+         +Y R+T  Q++ +E  + +CP P   +R +L RE 
Sbjct: 2   SCKDGSRNGIGIGMDN--------GKYVRYTPEQVEALERLYHDCPKPSSIRRLQLIREC 53

Query: 128 ----GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNC 183
                ++P Q+K WFQN+R + K   +R E+++L+  N KL A                 
Sbjct: 54  PTLSHIDPKQIKVWFQNRRCREK---QRKESSRLQAVNRKLTA----------------- 93

Query: 184 GGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELA 243
                              N  L EEIDR+     K V + V               + A
Sbjct: 94  ------------------MNKLLMEEIDRLQ----KQVSQLVYENGYFRQHTTQNTKQQA 131

Query: 244 VGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMT 303
           + +   +  +  G+ +     L +   P +A    ++ +A   +EE +  A         
Sbjct: 132 IKDTSCESAVRSGQQHN----LITQHPPRDASPAGLLSIAEETLEEFLSKAT-------- 179

Query: 304 SLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWS 361
              GTA    +   ++  P  IG       C   A+R   +V +    + EIL D   W 
Sbjct: 180 ---GTAVEWVQMPGMKPGPDSIGIVAISHGCNGVAARACGLVGLEPTRVAEILKDRPLW- 235

Query: 362 TVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGT 421
                       ++VL+     N  G ++++  +   P+ L P R+ + +RY     + +
Sbjct: 236 ------FRDCRAVDVLNVLPTAN-GGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDSS 288

Query: 422 WAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHN 474
             + + SL N +  P+       VR    PSG LI+    G S +  V+H+ ++   V  
Sbjct: 289 LVICERSLKNTQNGPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMNLEPWSVPE 348

Query: 475 LYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK-LAER 533
           + + L  +      K  +A L    +    V  +N+        +    R S L+ L++R
Sbjct: 349 VLRPLYESSKVLSQKTTMAALRHLRQISHEVSPSNV--------SGWGRRPSALRALSQR 400

Query: 534 MVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDD------------PGRPPGIVLS 581
           +   F   ++  T   WTT+   G DDV ++   S D             P     ++ +
Sbjct: 401 LSRGFNEALNGFTDEGWTTIGNDGVDDVTILVNSSPDKLMGLNLSFANGFPSVSNAVLCA 460

Query: 582 AATSFWLPVPPKRVFDFLRDENTRSEW-----DILS-------------------NGGVV 617
            A+     V P  +  FLR+   RSEW     D  +                    G V+
Sbjct: 461 KASMLLQNVHPAILLRFLREH--RSEWADNNMDAYTAAAIKVGPCSFSGSRVGNYGGQVI 518

Query: 618 QEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQ-----ESCTDPTASFVIYAPVD 672
             +AH     +    + L  V            M +LQ     +     T + +I AP+D
Sbjct: 519 LPLAHTIEHEEFLEVIKLEGVAHSPDDTIMPREMFLLQLCSGMDENAVGTCAELISAPID 578

Query: 673 IVAMNVVLNGGDPDYVALLPSGFAILP 699
                        D   LLPSGF I+P
Sbjct: 579 ---------ASFADDAPLLPSGFRIIP 596


>gi|82909735|gb|ABB94031.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
          Length = 842

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 167/749 (22%), Positives = 282/749 (37%), Gaps = 170/749 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                  +      L  EN  +R+
Sbjct: 76  -QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSQLVYENGYMRQ 120

Query: 209 EIDRISAIAAKYVGKPVVNY-PLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
           ++   S  A     + VV        P P  P                            
Sbjct: 121 QLQNASVAATDTSCESVVTSGQHQHNPTPQHP---------------------------- 152

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
              P +A    ++ +A   + E +  A+     W+  + G          ++  P  IG 
Sbjct: 153 ---PRDASPAGLLSIAEETLAEFLSKAKGAAVDWV-QMPG----------MKPGPDSIGI 198

Query: 328 KPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                 C   A+R   +V ++   + EIL D   W       +     L+VL+    GN 
Sbjct: 199 VAISNTCNGVAARACGLVGLDPTKVAEILKDRPSW-------LRDCRCLDVLTAFPTGN- 250

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------V 438
            G ++++  +    + L   R+ + +RY     +G+  V + SL   +  P+       V
Sbjct: 251 GGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHFV 310

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R    PSG LIQ    G S +  V+H++++   V  + + L  +      K  +A L R+
Sbjct: 311 RAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAAL-RR 369

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTG 557
             ++A        TGEV  +     + ++L+  ++R+   F   V+  T   W+ L   G
Sbjct: 370 LRQIAQEA-----TGEV--VFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLLGSDG 422

Query: 558 ADDVRVMTRKSVDDPGRPP------------GIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            +DV +    S +                  GI+ + A+     VPP  +  FLR+   R
Sbjct: 423 VEDVTIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREH--R 480

Query: 606 SEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           SEW                            S   V+  +AH     +    + L     
Sbjct: 481 SEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGL 540

Query: 641 LQSANSSQSNMLILQ------ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
            Q       +M +LQ      E+     A  V +AP+D             D   LLPSG
Sbjct: 541 TQEEAVLSRDMFLLQLCSGIDENAAGACAELV-FAPID---------ESFADDAPLLPSG 590

Query: 695 FAILP-----DGT-----SLHGANIGEAASGG--------------SLLTVAFQILVDSV 730
           F ++P     DG+     +L  A+  E  S G              S+LT+AFQ   +S 
Sbjct: 591 FRVIPLESRTDGSGGPNRTLDLASALEVGSAGTRTSGDSGANSNLRSVLTIAFQFTYESH 650

Query: 731 PTAKLSLGSVATVNNLIACTVERIKASLS 759
               ++  +   V +++A +V+R+  +L+
Sbjct: 651 LRENVAAMARQYVRSVVA-SVQRVAMALA 678


>gi|82908652|gb|ABB93496.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
          Length = 842

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 166/749 (22%), Positives = 282/749 (37%), Gaps = 170/749 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                  +      L  EN  +R+
Sbjct: 76  -QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSQLVYENGYMRQ 120

Query: 209 EIDRISAIAAKYVGKPVVNY-PLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
           ++   S  A     + VV        P P  P                            
Sbjct: 121 QLQNASVAATDTSCESVVTSGQHQHNPTPQHP---------------------------- 152

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
              P +A    ++ +A   + E +  A+     W+  + G          ++  P  IG 
Sbjct: 153 ---PRDASPAGLLSIAEETLAEFLSKAKGAAVDWV-QMPG----------MKPGPDSIGI 198

Query: 328 KPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                 C   A+R   +V ++   + E+L D   W       +     L+VL+    GN 
Sbjct: 199 VAISNTCNGVAARACGLVGLDPTKVAEVLKDRPSW-------LRDCRCLDVLTAFPTGN- 250

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------V 438
            G ++++  +    + L   R+ + +RY     +G+  V + SL   +  P+       V
Sbjct: 251 GGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHFV 310

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R    PSG LIQ    G S +  V+H++++   V  + + L  +      K  +A L R+
Sbjct: 311 RAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAAL-RR 369

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTG 557
             ++A        TGEV  +     + ++L+  ++R+   F   V+  T   W+ L   G
Sbjct: 370 LRQIAQEA-----TGEV--VFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLLGSDG 422

Query: 558 ADDVRVMTRKSVDDPGRPP------------GIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            +DV +    S +                  GI+ + A+     VPP  +  FLR+   R
Sbjct: 423 VEDVTIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREH--R 480

Query: 606 SEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           SEW                            S   V+  +AH     +    + L     
Sbjct: 481 SEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGL 540

Query: 641 LQSANSSQSNMLILQ------ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
            Q       +M +LQ      E+     A  V +AP+D             D   LLPSG
Sbjct: 541 TQEEAVLSRDMFLLQLCSGIDENAAGACAELV-FAPID---------ESFADDAPLLPSG 590

Query: 695 FAILP-----DGT-----SLHGANIGEAASGG--------------SLLTVAFQILVDSV 730
           F ++P     DG+     +L  A+  E  S G              S+LT+AFQ   +S 
Sbjct: 591 FRVIPLESRTDGSGGPNRTLDLASALEVGSAGTRTSGDSGANSNLRSVLTIAFQFTYESH 650

Query: 731 PTAKLSLGSVATVNNLIACTVERIKASLS 759
               ++  +   V +++A +V+R+  +L+
Sbjct: 651 LRENVAAMARQYVRSVVA-SVQRVAMALA 678


>gi|89514863|gb|ABD75306.1| class III homeodomain-leucine zipper protein C3HDZ1 [Ginkgo biloba]
          Length = 842

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 167/750 (22%), Positives = 280/750 (37%), Gaps = 171/750 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                  +      L  EN  +R+
Sbjct: 75  -QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSQLVYENGYMRQ 119

Query: 209 EIDRISAIAAKYVGKPVVNY-PLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
           ++   S        + VV        P P  P                            
Sbjct: 120 QLQNASVATTDTSCESVVTSGQHQHNPTPQHP---------------------------- 151

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
              P +A    ++ +A   + E +  A            GTA    +   ++  P  IG 
Sbjct: 152 ---PRDASPAGLLSIAEETLAEFLSKAT-----------GTAVDWVQMPGMKPGPDSIGI 197

Query: 328 KPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                 C   A+R   +V +    + EIL D   W       +     L+VL+    GN 
Sbjct: 198 VAISHSCSGVAARACGLVGLEPTKIAEILKDRPSW-------LRDCRCLDVLTPFPTGN- 249

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------V 438
            G ++++  +   P+ L   R+ + +RY     +G+  V + SL   +  P+       V
Sbjct: 250 GGTIELLYMQTYAPTTLASARDFWTLRYTTVLEDGSLVVCERSLSGAQGGPSIAPAQHFV 309

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R    PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L R+
Sbjct: 310 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAAL-RR 368

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTG 557
             ++A  +     TGEV  +     + ++L+  ++R+   F   V+  T   W+ +   G
Sbjct: 369 IRQIAQEV-----TGEV--VFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGNDG 421

Query: 558 ADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            +DV +    S                    GI+ + A+     VPP  +  FLR+   R
Sbjct: 422 MEDVTIAINSSPSKLLGSQVNSSNGLTAVGGGILCAKASMLLQNVPPALLVRFLREH--R 479

Query: 606 SEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           SEW                            S   V+  +AH     +    + L     
Sbjct: 480 SEWADCNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGL 539

Query: 641 LQSANSSQSNMLILQ------ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
            Q       +M +LQ      E+     A  V +AP+D             D   LLPSG
Sbjct: 540 TQEEAVLSRDMFLLQLCSGIDENAAGACAQLV-FAPID---------ESFADDAPLLPSG 589

Query: 695 FAILP-----DGTS-----LHGANIGEAASGG---------------SLLTVAFQILVDS 729
           F ++P     DGTS     L  A+  E  S G               S+LT+AFQ   ++
Sbjct: 590 FRVIPLDSRTDGTSGPNRTLDLASALEVGSAGTRTSGDSGANSFNLRSVLTIAFQFTYEN 649

Query: 730 VPTAKLSLGSVATVNNLIACTVERIKASLS 759
                ++  +   V +++A +V+R+  +L+
Sbjct: 650 HLRENVASMARQYVRSVVA-SVQRVAMALA 678


>gi|357454819|ref|XP_003597690.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
 gi|109729907|tpg|DAA05767.1| TPA_inf: class III HD-Zip protein CNA1 [Medicago truncatula]
 gi|355486738|gb|AES67941.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
          Length = 836

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 161/756 (21%), Positives = 289/756 (38%), Gaps = 186/756 (24%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 14  KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSHIEPKQIKVWFQNRRCREK-- 71

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A N    E                            EN RL++
Sbjct: 72  -QRKEASRLQAVNRKLSAMNKLLME----------------------------ENDRLQK 102

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++  +      Y  +   N              LA  +      +  G+        RS+
Sbjct: 103 QVSHL-VYENGYFRQHTQNT------------NLATKDTSCDSAVTSGQ--------RSL 141

Query: 269 SA---PTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGI 325
           +A   P +A    ++ +A   + E +  A            GTA    +   ++  P  I
Sbjct: 142 TAQHPPRDASPAGLLSIAEETLAEFLSKAT-----------GTAVEWVQMPGMKPGPESI 190

Query: 326 GPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
           G       C   A+R   +V +    + EIL D   W             +++L+     
Sbjct: 191 GIIAISHGCHGVAARACGLVGLEPTRVAEILKDRPSW-------YRDCRAVDILNVLPTA 243

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA------ 437
           N  G ++++  +   P+ L P R+ + +RY     +G+  + + SL N +  P+      
Sbjct: 244 N-GGTIELLYMQLYAPTTLAPARDLWLLRYTSVLEDGSLVICERSLKNTQNGPSMPPVQH 302

Query: 438 -VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD 496
            VR    PSG LI+    G S +  V+H++++   V  + + L  +      K  +  L 
Sbjct: 303 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTMLAQKTTMVAL- 361

Query: 497 RQCERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLS 554
           R   +++  ++ +  TG         GR+  ++  L +R+   F   ++  T   W+ + 
Sbjct: 362 RHLRQISHEVSQSNVTGW--------GRRPAALRALGQRLSRGFNEALNGFTDEGWSMIG 413

Query: 555 GTGADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDE 602
             G DDV ++   S D             P     ++ + A+     VPP  +  FLR+ 
Sbjct: 414 NDGVDDVTILVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREH 473

Query: 603 NTRSEW-----DILS-------------------NGGVVQEMAHIANGRDTGNCVSLLRV 638
             RSEW     D  S                    G V+  +AH     +    + L  +
Sbjct: 474 --RSEWADNNMDAYSAAAIKAGPCSFSGSRVGNYGGQVILPLAHTIEHEEFLEVIKLEGI 531

Query: 639 NCLQSANSSQSNML----ILQESCTD------PTASFVIYAPVDIVAMNVVLNGGDPDYV 688
                A+S +  ++     L + C+        T + +I+AP+D             D  
Sbjct: 532 -----AHSPEDAIMPREVFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDA 577

Query: 689 ALLPSGFAILPDGTSLHGAN-------------IGEAASGG------------SLLTVAF 723
            LLPSGF I+P  +    AN             IG A +              S++T+AF
Sbjct: 578 PLLPSGFRIIPLDSGKEVANNPNRTLDLTSALDIGPAGNKASNDYSGNSGCMRSVMTIAF 637

Query: 724 QILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           +   +S     ++  +   V ++I+ +V+R+  +LS
Sbjct: 638 EFAFESHMQDHVASMARQYVRSIIS-SVQRVALALS 672


>gi|302190096|dbj|BAJ14107.1| PHABULOSA [Juncus prismatocarpus subsp. leschenaultii]
          Length = 857

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 164/753 (21%), Positives = 294/753 (39%), Gaps = 162/753 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE    + +EP Q+K WFQN+R + K  
Sbjct: 12  KYVRYTPEQVEALERVYNECPKPSSLKRQQLIRENPLLVNIEPKQIKVWFQNRRCREK-- 69

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                            EN RL++
Sbjct: 70  -QRKEASRLQTVNRKLTAMNKLLME----------------------------ENDRLQK 100

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y+ + + N P ++    S    ++ G    Q    G +      +  + 
Sbjct: 101 QVSQL-VYENGYMRQQLHNQPSVATTDNSCDSVVSHG----QKSQHGQQSQRGQQIALTQ 155

Query: 269 SAPTEADKPM-IIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
           + P + + P  ++ +A   + E +  A      W+  +            ++  P  +G 
Sbjct: 156 NPPRDLNNPAGLLAIAEETLAEFLSKATGTSVEWVPLVG-----------MKPGPDSMGI 204

Query: 328 KPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                 C   A+R   +V +    + EIL D   W         R   L ++ TG  GN 
Sbjct: 205 IAVSNNCTGVAARACGLVSLEPTKVAEILKDKMSWYR----DCRRLDVLTIIPTGNGGN- 259

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN------LRPSPA-- 437
              ++++  +   P+ + P R+ + VRY     +G+  + + SL        + P+ A  
Sbjct: 260 ---IELIYMQTYAPTTIAPARDFWTVRYTTALDDGSLVICERSLTPTTTGGPVGPTTAGF 316

Query: 438 VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDR 497
           VR    PSG LI+    G S +  V+HV++D   V  + + L  +      K  +A + R
Sbjct: 317 VRAEMLPSGYLIRPCDGGGSMIHIVDHVDLDAWNVPEVIRPLYESPKVLAQKTTIAAM-R 375

Query: 498 QCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSG 555
              ++A  ++        G ++   GR+   +   ++R+   F   V+      W+ L  
Sbjct: 376 YIRQIAHELS--------GEVSFTGGRQPAVLRTFSQRLSRGFNDAVNGFVDDGWSLLGS 427

Query: 556 TGADDVRVMTRKSVDDPGRPP----------GIVLSAATSFWLP-VPPKRVFDFLRDENT 604
            G+DDV V    S D    P           G +L A +S  L  VPP  +  FLR+   
Sbjct: 428 DGSDDVSVAVNSSPDKLLGPHASLALFSSLGGGILCAKSSMLLQNVPPALLVQFLREH-- 485

Query: 605 RSEW----------------------DILSNGG-----VVQEMAHIANGRDTGNCVSLLR 637
           R+EW                       + SN G     V+  +AH     +    V L  
Sbjct: 486 RAEWADCSVDTYSAASLRSNNPFAVPGLRSNNGLWANQVILPLAHTVENEELLEVVRLEG 545

Query: 638 VNCLQSANSSQSNMLILQESCT--DPTA----SFVIYAPVDIVAMNVVLNGGDPDYVALL 691
            +         S  + L + C   D  A    + +++AP+D             D   LL
Sbjct: 546 HHGFNQDELVLSRDMYLLQLCNGIDENAPGACAQLVFAPID---------ESLADDAPLL 596

Query: 692 PSGFAILP-------------------------DGTSLHGANIGEAASGGSLLTVAFQIL 726
            SGF + P                         +G++ H ++   A+   S+LT+AFQ  
Sbjct: 597 ASGFRLTPLEPKNDGAAQTRTLDLASTLEIKPCNGSTRHASDSTSASHSRSVLTLAFQFA 656

Query: 727 VDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
            +      +++ +   V  ++A +V+R+  ++S
Sbjct: 657 YEHHLRDNVAIMARQYVRTVVA-SVQRVAMAIS 688


>gi|53792432|dbj|BAD53270.1| transcription factor 1-like protein [Oryza sativa Japonica Group]
 gi|56784274|dbj|BAD81956.1| transcription factor 1-like protein [Oryza sativa Japonica Group]
          Length = 250

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 131/246 (53%), Gaps = 20/246 (8%)

Query: 528 LKLAERMVISFCAGVSASTAHTWTTLSGTGAD-DVRVMTRKSVDDPGRPPGIVLSAATSF 586
           +KLA+ ++ SF  G++A+   TWT + G G + D+RV  R++ +       I LS   S 
Sbjct: 1   MKLADDLLASFAGGIAATGGGTWTVVIGAGTEKDIRVAYRRTTEGSSSYNAI-LSVTASL 59

Query: 587 WLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANS 646
            LP+P ++ FD LR+   R +WD+L +G VV+E   IA G    + V++L  +C ++   
Sbjct: 60  RLPLPMRKTFDLLRNLTHRCKWDVLVHGSVVKEEVTIARGVGNDDTVTVL--HCKRAGRE 117

Query: 647 SQSNMLILQESCTDPTASFVIYAPVDIVAMNVVL--------NGGDPDYVALLPSGFAIL 698
            +   +ILQ +  D + SF++Y+ +D   MN ++          G P   +L P+GF++L
Sbjct: 118 DRGRTMILQNNGYDASGSFMVYSQIDSELMNTMVLSPSDLPPGRGGP---SLYPTGFSLL 174

Query: 699 PDGTSLH---GANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIK 755
           PD  +     G  +GE   GG+L+T+ FQI V      ++   S A+   L+  T+  +K
Sbjct: 175 PDVEAAQDSSGIALGEV--GGTLMTMGFQIPVKLASGDRMYSRSAASAIRLMTDTIALVK 232

Query: 756 ASLSCE 761
            +L  E
Sbjct: 233 KTLMNE 238


>gi|90110448|gb|ABD90526.1| class III homeodomain-leucine zipper [Ginkgo biloba]
          Length = 842

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 167/750 (22%), Positives = 280/750 (37%), Gaps = 171/750 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                  +      L  EN  +R+
Sbjct: 75  -QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSQLVYENGYMRQ 119

Query: 209 EIDRISAIAAKYVGKPVVNY-PLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
           ++   S        + VV        P P  P                            
Sbjct: 120 QLQNASVATTDTSCESVVTSGQHQHNPTPQHP---------------------------- 151

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
              P +A    ++ +A   + E +  A            GTA    +   ++  P  IG 
Sbjct: 152 ---PRDASPAGLLSIAEETLAEFLSKAT-----------GTAVDWVQMPGMKPGPDSIGI 197

Query: 328 KPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                 C   A+R   +V +    + EIL D   W       +     L+VL+    GN 
Sbjct: 198 VAISHSCSGVAARACGLVGLEPTKIAEILKDRPSW-------LRDCRCLDVLTPFPTGN- 249

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------V 438
            G ++++  +   P+ L   R+ + +RY     +G+  V + SL   +  P+       V
Sbjct: 250 GGTIELLYMQTYAPTTLASARDFWTLRYTTVLEDGSLVVCERSLSGAQGGPSIAPAQHFV 309

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R    PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L R+
Sbjct: 310 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAAL-RR 368

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTG 557
             ++A  +     TGEV  +     + ++L+  ++R+   F   V+  T   W+ +   G
Sbjct: 369 IRQIAQEV-----TGEV--VFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGNDG 421

Query: 558 ADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            +DV +    S                    GI+ + A+     VPP  +  FLR+   R
Sbjct: 422 MEDVTIAINSSPSKLLGSQVNSSNGLTAVGGGILCAKASMLLQNVPPALLVRFLREH--R 479

Query: 606 SEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           SEW                            S   V+  +AH     +    + L     
Sbjct: 480 SEWADCNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGL 539

Query: 641 LQSANSSQSNMLILQ------ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
            Q       +M +LQ      E+     A  V +AP+D             D   LLPSG
Sbjct: 540 TQEEAVLSRDMFLLQLCSGIDENAAGACAQLV-FAPID---------ESFADDAPLLPSG 589

Query: 695 FAILP-----DGTS-----LHGANIGEAASGG---------------SLLTVAFQILVDS 729
           F ++P     DGTS     L  A+  E  S G               S+LT+AFQ   ++
Sbjct: 590 FRVIPLDSRTDGTSGPNRTLDLASALEVGSAGTRTSGDSGANSFNLRSVLTIAFQFTYEN 649

Query: 730 VPTAKLSLGSVATVNNLIACTVERIKASLS 759
                ++  +   V +++A +V+R+  +L+
Sbjct: 650 HLRENVASMARQYVRSVVA-SVQRVAMALA 678


>gi|326504574|dbj|BAJ91119.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 880

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 168/716 (23%), Positives = 280/716 (39%), Gaps = 169/716 (23%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R+++ R+      +EP Q+K WFQN+R + K  
Sbjct: 52  KYVRYTPEQVEALERVYNECPKPSSLRRQQIIRDCPILCNIEPKQIKVWFQNRRCREK-- 109

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E+++++T N KL A N    E                            EN RL++
Sbjct: 110 -QRKESSRMQTVNRKLTAMNKLLME----------------------------ENDRLQK 140

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ R                 L+   V ++ L+  + N  A       E    +   +++
Sbjct: 141 QVSR-----------------LVYENVSAKSLKTKIHNASAATTDTSCESVVTSGQQQAL 183

Query: 269 SAPT---EADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGI 325
           +AP    +A+ P  + LA+A  EE +         +M+   GTA    +   ++  P  I
Sbjct: 184 AAPRPQRDANNPAGL-LAIA--EETLTA-------FMSKATGTAVEWVQMMGMKPGPDSI 233

Query: 326 GPKPTGFKC--EASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
           G       C   A+R   +V +    + EIL D   W             +++L     G
Sbjct: 234 GIIAVSHNCIGVAARACGLVSLEPTKVAEILKDRPSW-------YRDCRCVDILHVFPTG 286

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA------ 437
           N  G ++++  +   P+ L   R+ + +RY     +G+  + + SL      P+      
Sbjct: 287 N-GGTIELIYMQTYAPTTLAAPRDFWTLRYTCGLEDGSLVICERSLTQSTGGPSGPNTPG 345

Query: 438 -VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD 496
            +R    PSG LI+    G S +  V+HV++D   V  + + L  +      K  +A L 
Sbjct: 346 FIRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKIVAQKMTIAAL- 404

Query: 497 RQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLS 554
           R   ++A   +  IP G         GR+   +   ++R+   F   VS      W+ L+
Sbjct: 405 RHIRQIAHESSGEIPYGA--------GRQPAVLRTFSQRLSRGFNDAVSGFPDDGWSLLT 456

Query: 555 GTGADDVRVMTRKS----VDDPGRPP--------GIVLSAATSFWLPVPPKRVFDFLRDE 602
             GA+D+ +    S    V     P         GI+ + A+     VPP  +  FLR+ 
Sbjct: 457 SDGAEDITITVNSSPNKLVGSHISPSPLFSAIGGGILCAKASMLVQDVPPALLVRFLREH 516

Query: 603 NTRSEW-----DILSNGGVVQE---MAHIANGRDTGNCVSL-----------LRVNCLQS 643
             RSEW     D  S   +      +  +  G   GN V L           L V  L+ 
Sbjct: 517 --RSEWADPGVDAYSAASLRASPYAVPGLRAGGFMGNQVILPLAHTLEHEEFLEVLRLEG 574

Query: 644 ANSSQSNMLILQE-------SCTDPTASF----VIYAPVDIVAMNVVLNGGDPDYVALLP 692
              S   +L+ ++       S  D  AS     +++AP+D             D   LLP
Sbjct: 575 HGFSHDEVLLARDMYLLQLCSGVDENASGACAQLVFAPID---------ESFADDAPLLP 625

Query: 693 SGFAILPDGT---------SLHGANIGEAASGGSL--------------LTVAFQI 725
           SGF ++P  T         +L  A+  E  SGG+L              LT+AFQ 
Sbjct: 626 SGFRVIPLDTKTDVPSATRTLDLASALEVGSGGALRGSGDSPGGCTRSVLTIAFQF 681


>gi|206572105|gb|ACI13685.1| putative HB15 HD-ZipIII [Malus x domestica]
          Length = 838

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 150/676 (22%), Positives = 251/676 (37%), Gaps = 144/676 (21%)

Query: 80  SGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVK 135
           S  D  +      +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K
Sbjct: 4   SCKDGNKHALDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIK 63

Query: 136 FWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFD 195
            WFQN+R + K   +R E ++L+  N KL A N    E                  +   
Sbjct: 64  VWFQNRRCREK---QRKEASRLQAVNRKLSAMNKLLMEEND--------------RLQKQ 106

Query: 196 EHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGG 255
             HL  EN   R+     +                           LA  +   +  +  
Sbjct: 107 VSHLVYENGYFRQHTQGTT---------------------------LATKDTSCESVVTS 139

Query: 256 GEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNED 315
           G+ +     L     P +A    ++ +A   + E +  A            GTA    + 
Sbjct: 140 GQHH-----LTPQHPPRDASPAGLLSIAEETLAEFLSKAT-----------GTAVEWVQM 183

Query: 316 EYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMT 373
             ++  P  IG       C   A+R   +V +    + EIL D+  W       +     
Sbjct: 184 PGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDLPSW-------LRDCRA 236

Query: 374 LEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR 433
           ++VL+     N  G ++++  +   P+ L P  + + +RY     +G+  V   SL N +
Sbjct: 237 VDVLNVLPTAN-GGTIELLYMQLYAPTTLAPACDFWLLRYTSVLEDGSLVVCARSLKNTQ 295

Query: 434 PSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAF 486
             P        VR    PSG LI+    G S +  V+H++++   V  + + L  +    
Sbjct: 296 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPCSVPEVLRPLYESSAVL 355

Query: 487 GAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSA 544
             K  +A L RQ  ++A  ++ +  TG         GR+  ++  L++R+   F   ++ 
Sbjct: 356 AQKMTMAAL-RQLRQIAHEVSQSNVTGW--------GRRPAALRALSQRLSRGFNDALNG 406

Query: 545 STAHTWTTLSGTGADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPP 592
            T   W+ +   G DDV ++   S D             P     ++ + A+     VPP
Sbjct: 407 FTDEGWSMMGNDGMDDVTILINSSPDKLMGLNLSFGNGFPAVSNSVLCAKASMLLQNVPP 466

Query: 593 KRVFDFLRDENTRSEW-----DILS-------------------NGGVVQEMAHIANGRD 628
             +  FLR+   RSEW     D  S                    G V+  +AH     +
Sbjct: 467 AILLRFLREH--RSEWADNNIDAYSAAAVKVGPCSLAGSRVGSFGGQVILPLAHTLEHEE 524

Query: 629 TGNCVSLLRVNCLQSANSSQSNMLILQE-SCTDPTA----SFVIYAPVDIVAMNVVLNGG 683
               + L  V            M +LQ  S  D  A    + +I+AP+D           
Sbjct: 525 FLEVIKLEGVGHSPEDAMMPREMFLLQLCSGMDENAVGSCAELIFAPID---------AS 575

Query: 684 DPDYVALLPSGFAILP 699
             D   LLPSGF I+P
Sbjct: 576 FADDAPLLPSGFRIIP 591


>gi|89514867|gb|ABD75308.1| class III homeodomain-leucine zipper protein C3HDZ3 [Ginkgo biloba]
          Length = 837

 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 169/747 (22%), Positives = 282/747 (37%), Gaps = 168/747 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 15  KYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 72

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                  +      L  EN  LR+
Sbjct: 73  -QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSQLVYENGYLRQ 117

Query: 209 EIDRISAIAAKYVGKPVVNY-PLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
           +I   S        + VV   P      P  P                            
Sbjct: 118 QIQTASIATTDTSCESVVTSGPHQHHLTPQHP---------------------------- 149

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
              P +A    ++ +A   + + +  A            GTA    +   ++  P  IG 
Sbjct: 150 ---PRDASPAGLLSIAEETLTQFLSKAT-----------GTAVDWIQMPGMKPGPDSIGI 195

Query: 328 KPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                 C   ASR   +V +    + EIL D   W       +     L+VL+    GN 
Sbjct: 196 VAISHSCTGVASRACGLVGLESSKVAEILKDRPSW-------LRDCRCLDVLTAFPTGN- 247

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP-------AV 438
            G ++++  +   P+ L   R+ + +RY     +G+  V + SL   +  P        V
Sbjct: 248 GGTIELLYTQMYAPTTLASARDIWTLRYTSVLEDGSLVVCERSLTGTQGGPNMPSVQHFV 307

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R    PSG LI+    G S +  V+H++++   V  + + L  +      K  ++ L R 
Sbjct: 308 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVIRPLYESSTVLAQKMTISAL-RH 366

Query: 499 CERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGT 556
             ++A  ++  +  G         GR+  ++   ++R+   F   V+  T   W+ L   
Sbjct: 367 LRQVAQEVSGEVVLGW--------GRQPAALRAFSQRLGRGFNEAVNGFTDDGWSLLGND 418

Query: 557 GADDVRVMTRKS-----------VDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENT 604
           G DDV +    S            D      G +L A  S  L  VPP  +  FLR+   
Sbjct: 419 GMDDVTIAINSSPSKLLASQLAASDGLAALGGGILCAKASMLLQNVPPALLVRFLREH-- 476

Query: 605 RSEW-----DILSN--------------GGV-----VQEMAHIANGRDTGNCVSLLRVNC 640
           RSEW     D  S+              GGV     +  +AH     +    + L     
Sbjct: 477 RSEWADCNIDAYSSAAMKANPYSIPSSRGGVFGSQVILPLAHTMEHEEFLEVIKLEGHGL 536

Query: 641 LQSANSSQSNMLILQE-SCTDPTA----SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGF 695
                    +M +LQ  S  D  A    + +++AP+D             D   LLPSGF
Sbjct: 537 THEETVLSRDMFLLQLCSGIDENAVGCCAQLVFAPID---------ASFADDAPLLPSGF 587

Query: 696 AILP-----DGT----SLHGANIGEAASGG--------------SLLTVAFQILVDSVPT 732
            ++P     DG+    +L  A+  +  S G              S+LT+AFQ   ++   
Sbjct: 588 RVIPLDSGTDGSTPNRTLDLASALDVGSAGTRTSGDYGSSTNMRSVLTIAFQFTYETHLR 647

Query: 733 AKLSLGSVATVNNLIACTVERIKASLS 759
             ++  +   V +++A +V+R+  +L+
Sbjct: 648 DNVAAMARQYVRSVVA-SVQRVAMALA 673


>gi|297826941|ref|XP_002881353.1| hypothetical protein ARALYDRAFT_902559 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327192|gb|EFH57612.1| hypothetical protein ARALYDRAFT_902559 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 859

 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 164/721 (22%), Positives = 274/721 (38%), Gaps = 172/721 (23%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 32  KYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 91

Query: 149 HE----RHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            E    +  N +L   N+ L  +N R ++ +S                     HL  EN 
Sbjct: 92  KEAARLQTVNRKLNAMNKLLMEENDRLQKQVS---------------------HLVYENG 130

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL 264
            +++++   S        + VV                          + G +       
Sbjct: 131 HMKQQLHTSSGTTTDNSCESVV--------------------------VSGQQHQQQNPN 164

Query: 265 LRSISAPTEADKPM-IIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPR 323
            + +    +A+ P  ++ +A  A+ E +  A            GTA    +   ++  P 
Sbjct: 165 PQHLQ--RDANNPAGLLSIAEEALAEFLSKAT-----------GTAVDWVQMIGMKPGPD 211

Query: 324 GIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGV 381
            IG       C   A+R   +V +  + + EIL D   W       +     ++ LS   
Sbjct: 212 SIGIVAISRNCSGIAARACGLVSLEPMKVAEILKDRPSW-------LRDCRCVDTLSVIP 264

Query: 382 AGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA---- 437
           AGN  G ++++  +   P+ L   R+ + +RY     +G++ V + S+ +    P     
Sbjct: 265 AGN-GGTIELIYTQMYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSITSATGGPTGPPS 323

Query: 438 ---VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVAT 494
              VR   RPSG LI+    G S +  V+HV++D   V  + + L  +      K  VA 
Sbjct: 324 SSFVRAEMRPSGFLIRPCEGGGSILHIVDHVDLDAWSVPEVMRPLYESSKILAQKMTVAA 383

Query: 495 LDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTT 552
           L R   ++A   +  +  G         GR+   +   ++R+   F   V+      W+ 
Sbjct: 384 L-RHVRQIAQETSGEVQYG--------GGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSP 434

Query: 553 LSGTGADDVRVMTRKSVDD-----------PGRPPGIVLSAATSFWLPVPPKRVFDFLRD 601
           +   GA+D+ VM   S              P    G++ + A+     VPP  +  FLR+
Sbjct: 435 MGSDGAEDITVMINLSPGKLCGSQYGNSFLPSFGSGVLCAKASMLLQNVPPAVLVRFLRE 494

Query: 602 ENTRSEW-----DILSNGGVVQEMAHIANGRDTG---NCVSL-----------LRVNCLQ 642
              RSEW     D  +   +      +   R  G   N V L           L V  L+
Sbjct: 495 H--RSEWADYGVDAYAAASLRASPFAVPCARAGGFPSNQVILPLAQTVEHEESLEVVRLE 552

Query: 643 SANSSQSNM-----LILQESCTDPTASFV------IYAPVDIVAMNVVLNGGDPDYVALL 691
               S  +M     + L + C+    + V      ++AP+D             D   LL
Sbjct: 553 GHAYSPEDMGLARDMYLLQLCSGVDENVVGGCAQLVFAPID---------ESFADDAPLL 603

Query: 692 PSGFAIL-------PDGTS----------LHGA--NIGEAASGG----SLLTVAFQILVD 728
           PSGF I+       P+G S          L G+    GEA   G    S+LT+AFQ   D
Sbjct: 604 PSGFRIIPLEQKSTPNGASTNRTLDLASALEGSTRQAGEADPNGCNFRSVLTIAFQFTFD 663

Query: 729 S 729
           +
Sbjct: 664 N 664


>gi|356526089|ref|XP_003531652.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 838

 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 160/747 (21%), Positives = 290/747 (38%), Gaps = 169/747 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 75

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E+ +L+A N +                TA+ ++      L  EN RL++
Sbjct: 76  ---------RKESSRLQAVNRKL---------------TAMNKL------LMEENDRLQK 105

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      +     +                A  +   +  +  G+       L + 
Sbjct: 106 QVSQLVYENGYFRQHTQITTQ-------------ATKDTNCESVVTSGQHN-----LTTQ 147

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 148 HPPRDASPAGLLSIAEETLAEFLSKAT-----------GTAVEWVQMPGMKPGPDSIGIV 196

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W             ++VL+     N  
Sbjct: 197 AISHGCTGVAARACGLVGLEPTRVAEILKDRPLW-------FRDCRAVDVLNVLPTAN-G 248

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  + + SL N +  P+       VR
Sbjct: 249 GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPSMPPVQHFVR 308

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L R  
Sbjct: 309 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RHL 367

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            +++  ++ +  TG         GR+  ++  L++R+   F   ++  T   WTT+S  G
Sbjct: 368 RQISHEVSQSNVTGW--------GRRPAALRALSQRLSRGFNEALNGFTDEGWTTISNDG 419

Query: 558 ADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            DDV ++   S D             P     ++ + A+     VPP  +  FLR+   R
Sbjct: 420 VDDVTILVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREH--R 477

Query: 606 SEWDILSNGGVVQEMAHIANGRDTGNCV------------------SLLRVNCLQS-ANS 646
           SEW   +          +     +G+CV                    L V  L+  A+S
Sbjct: 478 SEWADNNMDAYTAAAIKVGPCSLSGSCVGNFGGQVILPLAHTIEHEEFLEVIKLEGIAHS 537

Query: 647 SQSNM----LILQESCTD------PTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFA 696
            +  +    + L + C+        T + +I AP+D             D   LLPSGF 
Sbjct: 538 PEDTIMPREMFLLQLCSGMDENAVGTCAELISAPID---------ASFADDAPLLPSGFR 588

Query: 697 ILP---------------DGTSLHGANIGEAASGG---------SLLTVAFQILVDSVPT 732
           I+P                 +SL     G  AS G         S++T+AF+   +S   
Sbjct: 589 IIPLESGKEASSPNRTLDLASSLDVGPSGNRASNGSAGNSSCMRSVMTIAFEFAFESHMQ 648

Query: 733 AKLSLGSVATVNNLIACTVERIKASLS 759
             ++  +   V ++I+ +V+R+  +LS
Sbjct: 649 EHVTSMARQYVRSIIS-SVQRVALALS 674


>gi|89514843|gb|ABD75296.1| class III homeodomain-leucine zipper protein C3HDZ1 [Phaeoceros
           carolinianus]
          Length = 861

 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 163/715 (22%), Positives = 266/715 (37%), Gaps = 153/715 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L ++      +E  Q+K WFQN+R + K  
Sbjct: 19  KYVRYTNEQVEALERVYNECPKPSSIRRQQLIKDCPILANIEAKQIKVWFQNRRCREK-- 76

Query: 149 HERHENTQLRTENEKLRADN---MRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENAR 205
            +R E T+L + N KL A N   M   E LS  +                   L +EN  
Sbjct: 77  -QRKEATRLLSVNAKLTALNKLLMEENERLSKHT-----------------SQLAIENQY 118

Query: 206 LREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLL 265
           LR++  ++  + +  +GKP               L +   +  ++  + GG         
Sbjct: 119 LRQQQQQL--VKSDCIGKPSRR--------SQEQLAMTTTDTSSESAVTGGLQQHPTPQ- 167

Query: 266 RSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGI 325
                P +A    ++ +A   + E +  A            GTA    +   ++  P  I
Sbjct: 168 ---HPPRDASPAGLLSIAEETLTEFLAKAT-----------GTAVDWIQMPGMKPGPESI 213

Query: 326 GPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
           G       C   A+R   +V +    + EIL D   W       +     L++L     G
Sbjct: 214 GIVAISHGCAGIAARACGLVGLEPTKVAEILKDRPSW-------LRDCRRLDILGAFPTG 266

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA------ 437
           N  G ++++  +   P+ L P R+   +RY     +G   + + SL      P       
Sbjct: 267 N-GGTVELIYTQMYAPTTLAPPRDFCTLRYTTFLEDGNLVICERSLSGAHGGPTMPPVQY 325

Query: 438 -VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD 496
            VR    PSG LI+    G S +  V+HV+++   V  + + L  +      K  +  L 
Sbjct: 326 FVRAEMLPSGYLIRPCDGGGSIIHIVDHVDLEPWSVPEVLRPLYESSAVLAQKTTIGAL- 384

Query: 497 RQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGT 556
           R   ++A   A  +P G      N      +  L++R+   F   V+  +   W T+   
Sbjct: 385 RHLRQMAVESAIELPIG------NGQQPAVLRALSQRIARGFNEAVNGFSDDGWNTIVTD 438

Query: 557 GADDVRVMTRKS------------VDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDEN 603
           G DDV V    S             D      G +L A  S  L  VPP  +  FLR+  
Sbjct: 439 GMDDVSVAFNSSPHCKQLGAQATSTDRLCSLGGGILCAKASMLLQNVPPALLIRFLREH- 497

Query: 604 TRSEWDI-----------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVNC 640
            RSEW                         L +G +   +AH     +    V L     
Sbjct: 498 -RSEWADCDIDADAAAALKTSTYGASGRGSLCSGQLPMPLAHAVEQEEFLEVVKLEGHGA 556

Query: 641 LQSANSSQSNMLILQESCTDPTA----SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFA 696
                  +   L+   S  D  A    + +++APVD             D V LLPSGF 
Sbjct: 557 HDGTVLPRETFLLQLCSGIDENAVGACAQLVFAPVDAAV---------SDDVPLLPSGFR 607

Query: 697 ILP------DG-----------TSLHGAN-----IGEAASGG----SLLTVAFQI 725
           ++P      DG           ++L G +     +G++ +      S+LT+AFQ 
Sbjct: 608 VIPLDSGLIDGYGGLSRTLDLASTLEGGSESSRFVGDSGTSSCHLRSVLTIAFQF 662


>gi|89514869|gb|ABD75309.1| class III homeodomain-leucine zipper protein C3HDZ1 [Pseudotsuga
           menziesii]
          Length = 842

 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 166/749 (22%), Positives = 282/749 (37%), Gaps = 170/749 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPMLSNIEPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                  +      L  EN  +R+
Sbjct: 76  -QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSQLVYENGYMRQ 120

Query: 209 EIDRISAIAAKYVGKPVVNY-PLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
           ++   S  A     + VV+       P P  P                            
Sbjct: 121 QLQNASVAATDTSCESVVSSGQHQHNPTPQHP---------------------------- 152

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
              P +A    ++ +A   + E +  A+     W+  + G          ++  P  IG 
Sbjct: 153 ---PRDASPAGLLSIAEETLAEFLSKAKGAAVDWV-QMPG----------MKPGPDSIGI 198

Query: 328 KPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                 C   A+R   +V ++   + EIL +   W       +     L+VL+    GN 
Sbjct: 199 VAISNTCNGVAARACGLVGLDPTKVAEILKERPSW-------LRDCRCLDVLTAFPTGN- 250

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------V 438
            G ++++  +    + L   R+ + +RY     +G+  V + SL   +  P+       V
Sbjct: 251 GGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHFV 310

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R    PSG LIQ    G S +  V+H++++   V  + + L  +      K  +A L R+
Sbjct: 311 RAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAAL-RR 369

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTG 557
             ++A        TGEV  +     + ++L+  ++R+   F   V+  T   W+ +   G
Sbjct: 370 LRQIAQEA-----TGEV--VFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGSDG 422

Query: 558 ADDVRVMTRKSVDDPGRPP------------GIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            +DV +    S +                  GI+ + A+     VPP  +  FLR+   R
Sbjct: 423 VEDVTIAINSSPNKHFGSQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREH--R 480

Query: 606 SEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           SEW                            S   V+  +AH     +    + L     
Sbjct: 481 SEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGL 540

Query: 641 LQSANSSQSNMLILQ------ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
            Q       +M +LQ      E+     A  V +AP+D             D   LLPSG
Sbjct: 541 TQEEAVLSRDMFLLQLCSGIDENAAGACAELV-FAPID---------ESFADDAPLLPSG 590

Query: 695 FAILP-----DGT-----SLHGANIGEAASGG--------------SLLTVAFQILVDSV 730
           F I+P     DG+     +L  A+  E  S G              S+LT+AFQ   +S 
Sbjct: 591 FRIIPLESRTDGSGGPNRTLDLASALEVGSAGTRTSGDSGANSNLRSVLTIAFQFTYESH 650

Query: 731 PTAKLSLGSVATVNNLIACTVERIKASLS 759
               ++  +   V  ++A +V+R+  +L+
Sbjct: 651 LRENVAAMARQYVRTVVA-SVQRVAMALA 678


>gi|168045580|ref|XP_001775255.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673468|gb|EDQ59991.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 870

 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 186/756 (24%), Positives = 298/756 (39%), Gaps = 143/756 (18%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R +L +E      +EP Q+K WFQN+R + K  
Sbjct: 6   KYVRYTNEQVEALERVYHECPKPSSVRRHQLIKESPILANIEPKQIKVWFQNRRCREK-- 63

Query: 149 HERHENTQLRTENEKLRADN---MRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENAR 205
            +R E T+L + N KL A N   M   E L+  +                   L LEN  
Sbjct: 64  -QRKEATRLVSVNAKLTALNKLLMEENERLAKHT-----------------SQLTLENHA 105

Query: 206 LREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLL 265
           LR++I  +     ++     VN   L  P+    +E AV N G +    GG         
Sbjct: 106 LRQQIPNLPFPDGRHRLPSHVN---LQSPLK---IEGAV-NGGDESSTQGGICVKLPGQA 158

Query: 266 RSISAPTEADKPMIIELAVAAMEE----------LIRMAQMGEPLWMTSLDGTAAVLNED 315
              S  T  D  +   L      +          L+  A+     ++    GTA    + 
Sbjct: 159 GVASTDTSCDSAVTGGLPHRVTPQHSPRDTSPAGLLATAEETLTEFLAKATGTAVDWIQL 218

Query: 316 EYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMT 373
             ++  P  IG       C   A+R   +V ++   + E+L D   W       +     
Sbjct: 219 PGMKPGPDAIGIIAISHGCVGIAARACGLVALDASKVTEVLKDRPAW-------LQDCRR 271

Query: 374 LEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL---- 429
           +EVL      N  G ++++  +   P+ L P R+   +RY     +G   + + SL    
Sbjct: 272 MEVLGALSTAN-GGTIELLYTQMYAPTTLAPARDYCTLRYTTILEDGNLVICERSLTGGQ 330

Query: 430 --DNLRPSPA-VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAF 486
               + P  + VR     SG LI+    G   +  V+H + +   V  + + L  +    
Sbjct: 331 GGHTMPPVQSFVRGEMYSSGYLIRPCEGGGCIIHVVDHYDKEPWRVPEVLRPLYESPAVL 390

Query: 487 GAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSAST 546
             K  +  L R   RLA+       +GE GV  N      +  L +R+   F   V+   
Sbjct: 391 AQKSTIGAL-RHLRRLAAE-----ESGE-GVPRNGHHPAVLRILGQRLTKGFNDAVNGFG 443

Query: 547 AHTWTTLSGTGADDVRVM---TRKSVDDP--------GRPPGIVLSAATSFWLPVPPKRV 595
              W T    G DDV VM   T KS++              GI+ + A+     VPP  +
Sbjct: 444 DDGWETTVTDGLDDVSVMVNATPKSMEGQIASDKLLYSLGGGILCAKASMLLQNVPPSLL 503

Query: 596 FDFLRDENTRSEW---------DILSNG-GVVQEMAHIANGR------DTGNCVSLLRVN 639
             FLR+   RSEW            SNG G V     +++ +       +G C  +L V 
Sbjct: 504 IRFLREH--RSEWADYDMDDMASFRSNGNGYVPRGGGVSHVQLPLPLAQSGECGEILEVV 561

Query: 640 CLQSANSSQSNML----ILQESCT--DPTA----SFVIYAPVDIVAMNVVLNGGDPDYVA 689
            L+  +S Q  +L     L + C+  D +A    S +I+APVD+            D + 
Sbjct: 562 KLEGHSSVQHMVLSRDIFLLQLCSGIDESALGACSQLIFAPVDVALA---------DGIP 612

Query: 690 LLPSGFAILP------DG----------TSLHGAN-------IGEAASGG---SLLTVAF 723
           LLPSGF + P      DG          ++L G N       +   +S G   S+LT+AF
Sbjct: 613 LLPSGFCVSPIDTNVVDGFGLDRTLDLASTLEGGNDLRLNGDVKSNSSSGQMRSVLTIAF 672

Query: 724 QILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           Q   +      ++  +   V  ++A +V+R+  +L+
Sbjct: 673 QFAYEVHTRETVAAMARQYVRTVVA-SVQRVAMALA 707


>gi|297789842|ref|XP_002862848.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308596|gb|EFH39106.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 126

 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 51/84 (60%), Positives = 64/84 (76%), Gaps = 1/84 (1%)

Query: 63  EEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE 122
           ++E +S  + S NH G    + +  P KKKRYHRH+Q QIQE+E+FF+ECPHPDD QR  
Sbjct: 41  DQELESGNTSSGNH-GEGLRNNQAPPPKKKRYHRHSQIQIQELESFFRECPHPDDNQRNA 99

Query: 123 LSRELGLEPLQVKFWFQNKRTQMK 146
           LS +LGL+P+QVKFWFQNKRTQ K
Sbjct: 100 LSVQLGLDPVQVKFWFQNKRTQSK 123


>gi|110349540|gb|ABG73245.1| class III HD-Zip protein HDZ31 [Pinus taeda]
          Length = 842

 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 165/749 (22%), Positives = 282/749 (37%), Gaps = 170/749 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                  +      L  EN  +R+
Sbjct: 76  -QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSQLVYENGYMRQ 120

Query: 209 EIDRISAIAAKYVGKPVVNY-PLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
           ++   S  A     + VV        P P  P                            
Sbjct: 121 QLQNASVAATDTSCESVVTSGQHQHNPTPQHP---------------------------- 152

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
              P +A    ++ +A   + E +  A+     W+  + G          ++  P  IG 
Sbjct: 153 ---PRDASPAGLLSIAEETLTEFLSKAKGAAVDWV-QMPG----------MKPGPDSIGI 198

Query: 328 KPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                 C   A+R   +V ++   + EIL D   W       +     L+VL+    GN 
Sbjct: 199 VAISNTCNGVAARACGLVGLDPTKVAEILKDRPSW-------LRDCRCLDVLTAFPTGN- 250

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------V 438
            G ++++  +    + L   R+ + +RY     +G+  V + SL   +  P+       V
Sbjct: 251 GGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHFV 310

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R    PSG LIQ    G S +  V+H++++   V  + + L  +      K  +A L R+
Sbjct: 311 RAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAAL-RR 369

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTG 557
             ++A        TGEV  +     + ++L+  ++R+   F   V+  T   W+ +   G
Sbjct: 370 LRQIAQEA-----TGEV--VFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGSDG 422

Query: 558 ADDVRVMTRKSVDDPGRPP------------GIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            +DV +    S +                  GI+ + A+     VPP  +  FLR+   R
Sbjct: 423 VEDVTIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREH--R 480

Query: 606 SEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           SEW                            S   V+  +AH     +    + L     
Sbjct: 481 SEWADSNIDAYSAAALKSSPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGL 540

Query: 641 LQSANSSQSNMLILQ------ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
            Q       +M +LQ      E+     A  V +AP+D             D   LLPSG
Sbjct: 541 TQEEAVLSRDMFLLQLCSGIDENAAGACAELV-FAPID---------ESFADDAPLLPSG 590

Query: 695 FAILP-----DGT-----SLHGANIGEAASGG--------------SLLTVAFQILVDSV 730
           F ++P     DG+     +L  A+  E  S G              S+LT+AFQ   +S 
Sbjct: 591 FRVIPLESRTDGSGGPNRTLDLASALEVGSTGTRTSGDSGTSSNLRSVLTIAFQFTYESH 650

Query: 731 PTAKLSLGSVATVNNLIACTVERIKASLS 759
               ++  +   V +++A +V+R+  +++
Sbjct: 651 LRENVAAMARQYVRSVVA-SVQRVAMAIA 678


>gi|242042549|ref|XP_002468669.1| hypothetical protein SORBIDRAFT_01g050000 [Sorghum bicolor]
 gi|241922523|gb|EER95667.1| hypothetical protein SORBIDRAFT_01g050000 [Sorghum bicolor]
          Length = 840

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 165/728 (22%), Positives = 272/728 (37%), Gaps = 187/728 (25%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 27  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQNRRCRDKQR 86

Query: 149 HERHE----NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            E       N +L   N+ L  +N R ++ +S                      L  ENA
Sbjct: 87  KESSRLQAVNRKLTAMNKLLMEENERLQKQVS---------------------QLVHENA 125

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL 264
            +R+++   S          V      +PP P                            
Sbjct: 126 HMRQQLQNTSLANDTSCESNVT-----TPPNP---------------------------- 152

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRG 324
           +R  S P+                 L+ +A+     +++   GTA    +   ++  P  
Sbjct: 153 IRDASNPSG----------------LLAIAEETFTEFLSKATGTAIDWVQMPGMKPGPDS 196

Query: 325 IGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVA 382
           +G       C   A+R   +V +    ++EIL D   W            +LEV +   A
Sbjct: 197 VGIVAISHGCRGVAARACGLVNLEPTKVIEILKDRPSW-------FRDCRSLEVFTMFPA 249

Query: 383 GNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP------ 436
           GN  G ++++  +   P+ LVP R+ + +RY     +G+  V + SL      P      
Sbjct: 250 GN-GGTVELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNAASAQ 308

Query: 437 -AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATL 495
             VR    PSG L++    G S V  V+H++++   V  + + L  +      K     L
Sbjct: 309 QFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVAL 368

Query: 496 DRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTL 553
            R   ++A   +        G +    GR+   +   ++R+   F   +S      W+ +
Sbjct: 369 -RHLRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVM 419

Query: 554 SGTGADDVRVM---TRKSVDDP------GRPPGIVLSAATSFWLPVPPKRVFDFLRDENT 604
            G G +DV V    T+K  ++       G P GI+ + A+     VPP  +  FLR+   
Sbjct: 420 GGDGIEDVVVACNSTKKIRNNSNAGITFGAPGGIICAKASMLLQSVPPAVLVRFLREH-- 477

Query: 605 RSEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVN 639
           RSEW                            S G ++  +AH     +    V L    
Sbjct: 478 RSEWADYNMDAYLASSLKTSACSLPGLRPMRFSGGQMIMPLAHTVENEEILEVVRL-EGQ 536

Query: 640 CLQSANSSQSNMLILQESCT-----DPTASF-VIYAPVDIVAMNVVLNGGDPDYVALLPS 693
            L    +  S  + L + CT        +SF +++AP+D            PD   L+ S
Sbjct: 537 PLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID---------EHFPDDAPLISS 587

Query: 694 GFAILP-----DG----------TSLHGANIGEAASGG---------SLLTVAFQI---- 725
           GF ++P     DG          +SL   +    ASG          S+LT+AFQ     
Sbjct: 588 GFRVIPLDMKTDGVASGRTLDLASSLDVGSAAPQASGDASPDDCNLRSVLTIAFQFPYEM 647

Query: 726 -LVDSVPT 732
            L DSV T
Sbjct: 648 HLQDSVAT 655


>gi|242070525|ref|XP_002450539.1| hypothetical protein SORBIDRAFT_05g006700 [Sorghum bicolor]
 gi|241936382|gb|EES09527.1| hypothetical protein SORBIDRAFT_05g006700 [Sorghum bicolor]
          Length = 158

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 89/158 (56%), Gaps = 19/158 (12%)

Query: 392 MTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------------- 437
           M A+  V SP +  R+  ++RY K+  EG WAVVDVS+D +   PA              
Sbjct: 1   MNAKLWVQSPRLLNRKINFLRYNKRVAEGQWAVVDVSVDGILGPPAGSRTTDAAAVANNT 60

Query: 438 VRCRRRPSGCLIQEMP--NGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATL 495
             CR   SGCLI++M   NGY K+T V H E D+  V  L++ LV +GNAFGA+RW+A+L
Sbjct: 61  TGCRLLLSGCLIEDMGKGNGYCKITRVVHAEYDETMVPTLFRPLVRSGNAFGAQRWLASL 120

Query: 496 DRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAER 533
            RQ E LA + ++ +P G+     N  G + + +L  R
Sbjct: 121 QRQYEYLAVLHSSQVPRGDN---DNNTGTREVFRLGPR 155


>gi|206572107|gb|ACI13686.1| putative HB8 HD-ZipIII [Malus x domestica]
          Length = 844

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 155/738 (21%), Positives = 284/738 (38%), Gaps = 147/738 (19%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN        
Sbjct: 21  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQN-------- 72

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
             R    + R E  +L+  N +                TA+ ++      L  EN RL++
Sbjct: 73  --RRCREKQRKEASRLQTVNRKL---------------TAMNKL------LMEENDRLQK 109

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y  +   N              LA  +      +  G+ +         
Sbjct: 110 QVSQL-VYENSYFRQQTQNA------------TLATTDTSCDSVVTSGQHH-LTPQQHPP 155

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 156 PPPRDASPAGLLSIAEETLAEFLSKAT-----------GTAVEWVQLPGMKPGPDSIGIV 204

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V ++   + EIL D   W   F    S    L VLSTG      
Sbjct: 205 AISHGCTGVAARACGLVGLDPTRVAEILKDRPSW---FRNCRS-VDVLNVLSTG----NG 256

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  V + SL+N +  P+       VR
Sbjct: 257 GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQNFVR 316

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L R  
Sbjct: 317 AEMLPSGYLIRPCEGGGSILHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAAL-RNL 375

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            +++  ++     G         GR+  ++  L++R+   F   V+  T   W+ L   G
Sbjct: 376 RQISQEVSQPNSAGW--------GRRPAALRALSQRLSKGFNEAVNGFTDEGWSVLESDG 427

Query: 558 ADDVRVMTRKSVDD-----------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRS 606
            DDV ++   S              P     ++ + A+     VPP  +  FLR+   RS
Sbjct: 428 VDDVTLLVNSSPGKMMSANLYTNGVPSMSTAVLCAKASMLLQNVPPAILLRFLREH--RS 485

Query: 607 EW-----DILSNGG-------------------VVQEMAHIANGRDTGNCVSLLRVNCLQ 642
           EW     D  S                      V+  +AH     +    + +  +   +
Sbjct: 486 EWADRSIDAYSAAAIKAGPCNMLGPRAGSFGDQVILPLAHTIEHEEFMEVIKIENMGHYR 545

Query: 643 SANSSQSNMLILQESCTDP------TASFVIYAPVD---------------IVAMNVVLN 681
                 +  + L + C+        T + +++AP+D               I+ ++  ++
Sbjct: 546 EDMMMPAADIFLLQLCSGVDENAVGTCAELVFAPIDASFSDDAPILPSGFRIIPLDSRMD 605

Query: 682 GGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVA 741
              P+    L S   + P G+   G N G + +  S++T+AFQ   +      ++  +  
Sbjct: 606 TPSPNRTLDLASALEVGPAGSRASGDNAGHSGNTKSVMTIAFQFAFEIHLQENIAAMARQ 665

Query: 742 TVNNLIACTVERIKASLS 759
            V ++IA +V+R+  +LS
Sbjct: 666 YVRSIIA-SVQRVALALS 682


>gi|242070527|ref|XP_002450540.1| hypothetical protein SORBIDRAFT_05g006710 [Sorghum bicolor]
 gi|242070529|ref|XP_002450541.1| hypothetical protein SORBIDRAFT_05g006720 [Sorghum bicolor]
 gi|241936383|gb|EES09528.1| hypothetical protein SORBIDRAFT_05g006710 [Sorghum bicolor]
 gi|241936384|gb|EES09529.1| hypothetical protein SORBIDRAFT_05g006720 [Sorghum bicolor]
          Length = 158

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 89/158 (56%), Gaps = 19/158 (12%)

Query: 392 MTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------------- 437
           M A+  V SP +  R+  ++RY K+  EG WAVVDVS+D +   PA              
Sbjct: 1   MNAKLWVQSPRLLNRKINFLRYNKRVAEGQWAVVDVSVDGILGPPAGSRTTDAAAVANNT 60

Query: 438 VRCRRRPSGCLIQEMP--NGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATL 495
             CR   SGCLI++M   NGY K+T V H E D+  V  L++ L+ +GNAFGA+RW+A+L
Sbjct: 61  TGCRLLLSGCLIEDMGKGNGYCKITRVVHAEYDETMVPTLFRPLLRSGNAFGAQRWLASL 120

Query: 496 DRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAER 533
            RQ E LA + ++ +P G+     N  G + + +L  R
Sbjct: 121 QRQYEYLAVLHSSQVPRGDN---DNNTGTREVFRLGPR 155


>gi|224059140|ref|XP_002299735.1| predicted protein [Populus trichocarpa]
 gi|60327629|gb|AAX19054.1| class III HD-Zip protein 5 [Populus trichocarpa]
 gi|222846993|gb|EEE84540.1| predicted protein [Populus trichocarpa]
          Length = 851

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 147/678 (21%), Positives = 254/678 (37%), Gaps = 161/678 (23%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A N    E                            EN RL++
Sbjct: 76  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 106

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y  +   N              LA  +   +  +  G+ +     L   
Sbjct: 107 QVSQL-VYENGYFRQHTQNT------------TLASKDTSCESVVTSGQHH-----LTPQ 148

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 149 HPPRDASPAGLLSIAEETLTEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGIV 197

Query: 329 PTGFKCEA--SRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C    +R   +V +    + EIL D   W             ++VL+     N  
Sbjct: 198 AISHGCSGVGARACGLVGLEPTRVAEILKDRPSW-------FRDCRAVDVLNVLPTAN-G 249

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  V + SL N +  P+       VR
Sbjct: 250 GTIELLYMQLYAPTTLAPGRDFWLLRYTSVLEDGSLVVCERSLKNTQNGPSMPPVQHFVR 309

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG L++    G S +  V+H++++   V  + + L  +      K  +A L RQ 
Sbjct: 310 AEMLPSGYLVRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQL 368

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTGA 558
            ++A   + +        +TN   R + L+ L++R+   F   ++  +   W+ +   G 
Sbjct: 369 RQIAQEASQS-------SVTNWGRRPAALRALSQRLSRGFNEALNGFSDEGWSMIGNDGM 421

Query: 559 DDVRVMTRKSVDDPGRPPGIVLSAATSF----------------------------WLPV 590
           DDV ++   S   P +  G+ LS +  F                             L V
Sbjct: 422 DDVTILVNSS---PDKLMGLNLSFSNGFPAVSSAVLCAKASMLLQAGIQNCFLSLQHLNV 478

Query: 591 PPKRVFDFLRDENTRSEW-----DILS-------------------NGGVVQEMAHIANG 626
           PP  +  FLR+   RSEW     D  +                    G V+  +AH    
Sbjct: 479 PPAILLRFLREH--RSEWADNNIDAYAAAAVKVGPCSLQGSRVGNFGGQVILPLAHTVEH 536

Query: 627 RDTGNCVSLLRVNCLQSANSSQSNMLILQESC-----TDPTASFVIYAPVDIVAMNVVLN 681
            +    + L  V           ++ +LQ  C        T + +I+AP+D         
Sbjct: 537 EEFLEVIKLEGVCHSPEDAIMPRDVFLLQLCCGMDENAVGTCAELIFAPIDATF------ 590

Query: 682 GGDPDYVALLPSGFAILP 699
               D   LLPSGF I+P
Sbjct: 591 ---ADDAPLLPSGFRIIP 605


>gi|90110450|gb|ABD90527.1| class III homeodomain-leucine zipper [Pseudotsuga menziesii]
          Length = 842

 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 165/749 (22%), Positives = 280/749 (37%), Gaps = 170/749 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                  +      L  EN  +R+
Sbjct: 76  -QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSQLVYENGYMRQ 120

Query: 209 EIDRISAIAAKYVGKPVVNY-PLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
           ++   S  A     + VV        P P  P                            
Sbjct: 121 QLQNASVAATDTSCESVVTSGQHQHNPTPQHP---------------------------- 152

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
              P +A    ++ +A   + E +  A+     W+  + G          ++  P  IG 
Sbjct: 153 ---PRDASPAGLLSIAEETLAEFLSKAKGAAVDWV-QMPG----------MKPGPDSIGI 198

Query: 328 KPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                 C   A+R   +V ++   + EIL +   W       +     L+VL+    GN 
Sbjct: 199 VAISNTCNGVAARACGLVGLDPTKVAEILKERPSW-------LRDCRCLDVLTAFPTGN- 250

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------V 438
            G ++++  +    + L   R+ + +RY     +G+  V + SL   +  P+       V
Sbjct: 251 GGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHFV 310

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R    PSG LIQ    G S +  V+H++++   V  + + L  +      K  +A L R+
Sbjct: 311 RAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAAL-RR 369

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTG 557
             ++A        TGEV  +     + ++L+  ++R+   F   V+  T   W+ +   G
Sbjct: 370 LRQIAQEA-----TGEV--VFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGSDG 422

Query: 558 ADDVRVMTRKSVDDPGRPP------------GIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            +DV +    S +                  GI  + A+     VPP  +  FLR+   R
Sbjct: 423 VEDVTIAINSSPNKHFGSQVNASNGLTTLGGGIPCAKASMLLQNVPPALLVRFLREH--R 480

Query: 606 SEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           SEW                            S   V+  +AH     +    + L     
Sbjct: 481 SEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGL 540

Query: 641 LQSANSSQSNMLILQ------ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
            Q       +M +LQ      E+     A  V +AP+D             D   LLPSG
Sbjct: 541 TQEEAVLSRDMFLLQLCSGIDENAAGACAELV-FAPID---------ESFADDAPLLPSG 590

Query: 695 FAILP-----DGT-----SLHGANIGEAASGG--------------SLLTVAFQILVDSV 730
           F ++P     DG+     +L  A+  E  S G              S+LT+AFQ   +S 
Sbjct: 591 FRVIPLESRTDGSGGPNRTLDLASALEVGSAGTRTSGDSGANSNLRSVLTIAFQFTYESH 650

Query: 731 PTAKLSLGSVATVNNLIACTVERIKASLS 759
               ++  +   V  ++A +V+R+  +L+
Sbjct: 651 LRENVAAMARQYVRTVVA-SVQRVAMALA 678


>gi|242070523|ref|XP_002450538.1| hypothetical protein SORBIDRAFT_05g006695 [Sorghum bicolor]
 gi|241936381|gb|EES09526.1| hypothetical protein SORBIDRAFT_05g006695 [Sorghum bicolor]
          Length = 144

 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/139 (42%), Positives = 82/139 (58%), Gaps = 16/139 (11%)

Query: 392 MTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------------- 437
           M A+  V SP +  R+  ++RY K+  EG WAVVDVS+D +   PA              
Sbjct: 1   MNAKLWVQSPRLLNRKINFLRYNKRVAEGQWAVVDVSVDGILGPPAGSRTTDAAAVANNT 60

Query: 438 VRCRRRPSGCLIQEMP--NGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATL 495
             CR   SGCLI++M   NGY K+T V H E D+  V  L++ L+ +GNAFGA+RW+A+L
Sbjct: 61  TGCRLLLSGCLIEDMGKGNGYCKITRVVHAEYDETMVPTLFRPLLRSGNAFGAQRWLASL 120

Query: 496 DRQCERLASVMATNIPTGE 514
            RQ E LA + ++ IP G+
Sbjct: 121 QRQYEYLAVLHSSQIPRGD 139


>gi|224142954|ref|XP_002324794.1| predicted protein [Populus trichocarpa]
 gi|60327633|gb|AAX19056.1| class III HD-Zip protein 7 [Populus trichocarpa]
 gi|222866228|gb|EEF03359.1| predicted protein [Populus trichocarpa]
          Length = 823

 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 162/742 (21%), Positives = 291/742 (39%), Gaps = 160/742 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 5   KYVRYTPEQVEALERLYHECPKPTSTRRQQLIRECPILSHIEPKQIKVWFQNRRCREKQ- 63

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E  +L+A N +                TA+ ++      L  EN RL++
Sbjct: 64  ---------RKEASRLQAVNRKL---------------TAMNKL------LMEENDRLQK 93

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y  +   N              LA  +   +  +  G+       L   
Sbjct: 94  QVSQL-VYENSYFRQQTQN-----------ATTLATTDTSCESVVTSGQ-----HRLTPQ 136

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + + +  A            GTA    +   ++  P  IG  
Sbjct: 137 HPPRDASPAGLLSIAEENLAQFLSKAT-----------GTAVEWVQMPGMKPGPDSIGIV 185

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W             ++V++     N  
Sbjct: 186 AISHGCTGVAARACGLVGLEPTRVAEILKDRPSW-------FRDCRAVDVINAMSTAN-G 237

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+   +RY     +G+  V + SL+N +  P+       VR
Sbjct: 238 GTIELLYMQLYAPTTLAPARDFLLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPTQHFVR 297

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L R  
Sbjct: 298 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAAL-RHL 356

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            +++  ++    TG         GR+  ++  L++R+   F   V+      W+ L   G
Sbjct: 357 RQISQEISQPNVTGW--------GRRPAALRALSQRLSKGFNEAVNGFADEGWSLLESDG 408

Query: 558 ADDVRVMTRKSVD---------DPGRPP--GIVLSAATSFWLP-VPPKRVFDFLRDENTR 605
            DDV V+   S           D G P     VL A  S  L  VPP  +  FLR+   R
Sbjct: 409 IDDVTVLVNSSPTKTMGVNFSYDNGFPSMNNAVLCAKASMLLQNVPPAILLRFLREH--R 466

Query: 606 SEWDILSNGGVVQEMAHIANGRDTGNC-------------VSLLRVNCLQSANSS----- 647
           SEW   ++ G+    A+ A+    G C             V L   + +++  +      
Sbjct: 467 SEW---ADNGID---AYAASAIKAGPCSLPVSRAGNFGGQVILPLAHTIENEEAKVIKLE 520

Query: 648 ----QSNMLI-----LQESCTDP------TASFVIYAPVD---------------IVAMN 677
               + +ML+     L + C+        T + +I+AP+D               I+ ++
Sbjct: 521 NMGYREDMLMPGDVFLLQLCSGVDENAVGTCAELIFAPIDASFSDDAPIIPSGFRIIPLD 580

Query: 678 VVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSL 737
             ++   P+    L S   + P G    G   G +    S++T+AFQ   +      ++ 
Sbjct: 581 SGMDASSPNRTLDLASALEVGPAGNRASGDLSGRSGCTKSVMTIAFQFAFEMHLQENVAS 640

Query: 738 GSVATVNNLIACTVERIKASLS 759
            +   V ++IA +V+R+  +LS
Sbjct: 641 MARQYVRSIIA-SVQRVALALS 661


>gi|219879370|gb|ACL51017.1| class III HD-Zip protein 8 [Citrus trifoliata]
          Length = 829

 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 156/738 (21%), Positives = 285/738 (38%), Gaps = 146/738 (19%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQ++R + K  
Sbjct: 5   KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQDRRCREKQ- 63

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E  +L+A N +                TA+ ++      L  EN RL++
Sbjct: 64  ---------RKEASRLQAVNRKL---------------TAMNKL------LMEENDRLQK 93

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      +  +   N              LA  +   +     G+ +         
Sbjct: 94  QVSQL-VYENTFFRQQTQNAA-----------TLATTDTSCESVATSGQHHLTPQQQHQ- 140

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 141 HPPRDASPAGLLSIAEETLTEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGIV 189

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V ++   + EIL D   W      +      + VL TG +G   
Sbjct: 190 AISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT-- 243

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
             ++++  +   P+ L P R+ + +RY     +G+  V + SL+N +  P+       VR
Sbjct: 244 --IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVR 301

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L R  
Sbjct: 302 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHL 360

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            +++  ++    TG         GR+  ++  L++R+   F   ++  T   W+ L   G
Sbjct: 361 RQISQEVSQPSVTGW--------GRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDG 412

Query: 558 ADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            DDV V    S               P     ++ + A+     VPP  +  FLR+   R
Sbjct: 413 IDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--R 470

Query: 606 SEW-----DILS-------------------NGGVVQEMAHIANGRDTGNCVSLLRVNCL 641
           SEW     D  S                    G V+  +AH     +    + L  +   
Sbjct: 471 SEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHY 530

Query: 642 QSANSSQSNMLILQE-SCTDPTA----SFVIYAPVD---------------IVAMNVVLN 681
           +      S++ +LQ  S  D  A    + +++AP+D               I+ ++   +
Sbjct: 531 REDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKD 590

Query: 682 GGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVA 741
              P+    L S   + P G    G +  +  S  S++T+AFQ   +      ++  +  
Sbjct: 591 TPSPNRTLDLASALEVGPTGNKASGDSSTQCGSKKSVITIAFQFAFEMHLQENVASMARQ 650

Query: 742 TVNNLIACTVERIKASLS 759
            V  +IA +V+R+  +LS
Sbjct: 651 YVRGIIA-SVQRVALALS 667


>gi|297852954|ref|XP_002894358.1| ATHB-15 [Arabidopsis lyrata subsp. lyrata]
 gi|297340200|gb|EFH70617.1| ATHB-15 [Arabidopsis lyrata subsp. lyrata]
          Length = 837

 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 167/746 (22%), Positives = 287/746 (38%), Gaps = 168/746 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A                                    N  L E
Sbjct: 75  -QRKEASRLQAVNRKLTA-----------------------------------MNKLLME 98

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           E DR+    ++ V +   +Y     P PS P +    +   +  +  G+       L S 
Sbjct: 99  ENDRLQKQVSQLVHEN--SYFRQHTPNPSLPAK----DTSCESVVTSGQHQ-----LASQ 147

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
           +   +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 148 NPQRDASPAGLLSIAEETLAEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGII 196

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EI+ D   W             ++V++     N  
Sbjct: 197 AISHGCTGVAARACGLVGLEPTRVAEIVKDRPSW-------FRECRAVDVMNVLPTAN-G 248

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  V + SL + +  P+       VR
Sbjct: 249 GTIELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVR 308

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L RQ 
Sbjct: 309 AEMLPSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAAL-RQL 367

Query: 500 ERLAS-VMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGT 556
           +++A  V  TN          N  GR+  ++  L++R+   F   V+  T   W+ + G 
Sbjct: 368 KQIAQEVTQTNSS-------VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVI-GD 419

Query: 557 GADDVRVMTRKSVD---------DPGRPP--GIVLSAATSFWLP-VPPKRVFDFLRDENT 604
             DDV +    S D           G  P   +VL A  S  L  VPP  +  FLR+   
Sbjct: 420 SMDDVTITVNSSPDKLMGINLTFSNGFAPVSNVVLCAKASMLLQNVPPAILLRFLREH-- 477

Query: 605 RSEW---DILS------------------NGGVVQEMAHIANGRDTGNCVSLLRVNCLQS 643
           RSEW   +I +                   G V+  +AH     +    + L  +     
Sbjct: 478 RSEWADNNIDAYLAAAVKVGPCSARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPE 537

Query: 644 ANSSQSNMLILQ-----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL 698
                 ++ +LQ     +     T + +I+AP+D             D   LLPSGF I+
Sbjct: 538 DAIVPRDIFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRII 588

Query: 699 P-------------------------DGTSLHGANIGEAASGGSLLTVAFQILVDSVPTA 733
           P                          GT       G +    S++T+AF+  ++S    
Sbjct: 589 PLDSAKQEVSSPNRTLDLASALEIGSAGTKASADQSGNSTCARSVMTIAFEFGIESHMQE 648

Query: 734 KLSLGSVATVNNLIACTVERIKASLS 759
            ++  +   V  +I+ +V+R+  +LS
Sbjct: 649 HVASMARQYVRGIIS-SVQRVALALS 673


>gi|253759534|ref|XP_002488929.1| hypothetical protein SORBIDRAFT_1592s002010 [Sorghum bicolor]
 gi|241947171|gb|EES20316.1| hypothetical protein SORBIDRAFT_1592s002010 [Sorghum bicolor]
          Length = 144

 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 58/139 (41%), Positives = 82/139 (58%), Gaps = 16/139 (11%)

Query: 392 MTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------------- 437
           M AE  V SP +  R+  ++RY K+  EG WAVVDVS+D +   P+              
Sbjct: 1   MNAELWVQSPRLLNRKINFLRYNKRVAEGQWAVVDVSVDGILGPPSGSRTTDAAAVANNT 60

Query: 438 VRCRRRPSGCLIQEMP--NGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATL 495
             CR   SGCLI++M   NGY K+T V H E D+  V  L++ L+ +GNAFGA+RW+A+L
Sbjct: 61  TGCRLLLSGCLIEDMGKGNGYCKITRVVHAEYDETMVPTLFRPLLRSGNAFGAQRWLASL 120

Query: 496 DRQCERLASVMATNIPTGE 514
            RQ E LA + ++ +P G+
Sbjct: 121 QRQYEYLAVLHSSQVPRGD 139


>gi|383127045|gb|AFG44152.1| Pinus taeda anonymous locus 0_11087_01 genomic sequence
 gi|383127047|gb|AFG44153.1| Pinus taeda anonymous locus 0_11087_01 genomic sequence
 gi|383127051|gb|AFG44155.1| Pinus taeda anonymous locus 0_11087_01 genomic sequence
 gi|383127053|gb|AFG44156.1| Pinus taeda anonymous locus 0_11087_01 genomic sequence
 gi|383127055|gb|AFG44157.1| Pinus taeda anonymous locus 0_11087_01 genomic sequence
 gi|383127057|gb|AFG44158.1| Pinus taeda anonymous locus 0_11087_01 genomic sequence
 gi|383127059|gb|AFG44159.1| Pinus taeda anonymous locus 0_11087_01 genomic sequence
 gi|383127061|gb|AFG44160.1| Pinus taeda anonymous locus 0_11087_01 genomic sequence
 gi|383127063|gb|AFG44161.1| Pinus taeda anonymous locus 0_11087_01 genomic sequence
 gi|383127065|gb|AFG44162.1| Pinus taeda anonymous locus 0_11087_01 genomic sequence
 gi|383127067|gb|AFG44163.1| Pinus taeda anonymous locus 0_11087_01 genomic sequence
 gi|383127069|gb|AFG44164.1| Pinus taeda anonymous locus 0_11087_01 genomic sequence
          Length = 100

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/94 (58%), Positives = 70/94 (74%)

Query: 665 FVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQ 724
            VIYAPV+I A++ V+NG D   VALLPSGF ILP+G     + I      GS+LT+AFQ
Sbjct: 1   MVIYAPVEISAIHQVMNGNDSINVALLPSGFVILPEGPPESRSVIDNRQVEGSILTIAFQ 60

Query: 725 ILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           ILV+ +P+AKL+L SV TVNNLI+CT +RIKA+L
Sbjct: 61  ILVNDLPSAKLTLESVETVNNLISCTAQRIKAAL 94


>gi|222640034|gb|EEE68166.1| hypothetical protein OsJ_26284 [Oryza sativa Japonica Group]
          Length = 133

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/89 (67%), Positives = 63/89 (70%), Gaps = 22/89 (24%)

Query: 64  EEFDSTKSGSENHEGA----SGDDQ--EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           +EF+S KS SEN +GA    SGDDQ   QRP K               EAFFKECPHPDD
Sbjct: 45  DEFES-KSCSENVDGAGDGFSGDDQGPNQRPRK---------------EAFFKECPHPDD 88

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           KQRKELSRELGLEPLQVKFWFQNKRTQMK
Sbjct: 89  KQRKELSRELGLEPLQVKFWFQNKRTQMK 117


>gi|242067919|ref|XP_002449236.1| hypothetical protein SORBIDRAFT_05g006665 [Sorghum bicolor]
 gi|241935079|gb|EES08224.1| hypothetical protein SORBIDRAFT_05g006665 [Sorghum bicolor]
          Length = 139

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/139 (41%), Positives = 81/139 (58%), Gaps = 17/139 (12%)

Query: 392 MTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------------- 437
           M AE  V SP +  R+  ++RY K+  EG WAV+DVS+D +   PA              
Sbjct: 1   MNAELWVQSPRLLKRKINFLRYNKRVAEGQWAVMDVSVDGILGPPAGSRTTDAAVVANNT 60

Query: 438 VRCRRRPSGCLIQEM--PNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATL 495
             CR  PSGCLI++M   NGY K+TWV H E D+  V   ++ L+ +G AFGA RW+A+L
Sbjct: 61  TGCRLLPSGCLIEDMGKGNGYCKITWVVHAEYDETMVPT-FRPLLRSGKAFGAHRWLASL 119

Query: 496 DRQCERLASVMATNIPTGE 514
            RQ E LA + ++ +P G+
Sbjct: 120 QRQYEYLAVLHSSQVPRGD 138


>gi|449468708|ref|XP_004152063.1| PREDICTED: homeobox-leucine zipper protein ROC7-like [Cucumis
           sativus]
 gi|449509074|ref|XP_004163485.1| PREDICTED: homeobox-leucine zipper protein ROC7-like [Cucumis
           sativus]
          Length = 562

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 180/410 (43%), Gaps = 40/410 (9%)

Query: 327 PKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAM-------TLEVLST 379
           P P G+  E S ETA++ ++  SL+ I+MD  QW+++FS I+  A          + L T
Sbjct: 129 PPPHGYTVERSVETAILSISSQSLMSIMMDGAQWASMFSSIICSASDEVVFYPLKKFLLT 188

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR-----P 434
           G  G       +M AEF++P+  +P   + ++R+ K     T+A+ DVS D        P
Sbjct: 189 GPCG---WEFVLMNAEFRLPAGFLPRWNTRFMRFKKLIVGETYAIFDVSTDYFENMTADP 245

Query: 435 SPAVRCRRRPSGCLIQEMPNGY-SKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVA 493
           +  V  +RRPSG +I+  P G+ S+V W+E+ EV    + N      +      A++W++
Sbjct: 246 TQKVVYKRRPSGVIIR--PCGFLSEVIWIENAEVQKIDIPNHLHSTFTPNFHLTARQWIS 303

Query: 494 TLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVS-ASTAHTWTT 552
            + +  +R        I T E+  +   D    +L +   +   F   V+   T   W  
Sbjct: 304 MISQNLKRRNG----EIVTEEMFAVRRMDV-PDLLTMGNNLRKYFLQAVNPFPTERKWDL 358

Query: 553 LSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILS 612
            S    D +R++        GR    +  A  +  L   P  +  +L   N   +    S
Sbjct: 359 FSD---DKIRILRDIKASYIGRRDDFI--AIRTVCLAETPSTLLTYLDTNNYILQTSKKS 413

Query: 613 NGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVD 672
              +   +A +A   D  +C ++L V        ++ N   LQES  +   SF++ + + 
Sbjct: 414 QAQLSMTVALLAT--DESSC-TVLSVKKETGDEDTKDNYFFLQESTENEYCSFILSSQMT 470

Query: 673 IVAMNV-VLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTV 721
              ++V +L     + + L PSGFAI+P       A  G   S  S +T+
Sbjct: 471 KADVHVSLLPMFCRNCLFLRPSGFAIMP-------AEPGGLQSKASFVTI 513


>gi|413957206|gb|AFW89855.1| rolled leaf1 [Zea mays]
          Length = 713

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 163/725 (22%), Positives = 269/725 (37%), Gaps = 186/725 (25%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 30  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQNRRCRDKQR 89

Query: 149 HERHE----NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            E       N +L   N+ L  +N R ++ +S                      L  ENA
Sbjct: 90  KESSRLQAVNRKLTAMNKLLMEENERLQKQVS---------------------QLVHENA 128

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL 264
            +R+++   S          V      +PP P                            
Sbjct: 129 HMRQQLQNTSLANDTSCESNVT-----TPPNP---------------------------- 155

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRG 324
           +R  S P+                 L+ +A+     +++   GTA    +   ++  P  
Sbjct: 156 IRDASNPSG----------------LLAIAEETFTEFLSKATGTAIDWVQMPGMKPGPDS 199

Query: 325 IGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVA 382
           +G       C   A+R   +V +     +EIL D   W            +LEV +   A
Sbjct: 200 VGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSW-------FRDCRSLEVFTRFPA 252

Query: 383 GNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP------ 436
           GN  G ++++  +   P+ LVP R+ + +RY     +G+  V + SL      P      
Sbjct: 253 GN-GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNAASTQ 311

Query: 437 -AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATL 495
             VR    PSG L++    G S V  V+H++++   V  + + L  +      K     L
Sbjct: 312 QFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVAL 371

Query: 496 DRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTL 553
            R   ++A   +        G +    GR+   +   ++R+   F   +S      W+ +
Sbjct: 372 -RHLRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVM 422

Query: 554 SGTGADDVRVM---TRKSVDDP------GRPPGIVLSAATSFWLPVPPKRVFDFLRDENT 604
            G G +DV +    T+K  +        G P GI+ + A+     VPP  +  FLR+   
Sbjct: 423 GGDGIEDVVIACNSTKKIRNTSNAGITFGAPGGIICAKASMLLQSVPPAVLVRFLREH-- 480

Query: 605 RSEWD-------------------------ILSNGGVVQEMAHIANGRDTGNCVSLLRVN 639
           RSEW                            S G ++  +AH     +    V L    
Sbjct: 481 RSEWADYNIDAYLASSLKTSACSLPGLRPMRFSEGQMIMPLAHTVENEEILEVVRL-EGQ 539

Query: 640 CLQSANSSQSNMLILQESCT-----DPTASF-VIYAPVDIVAMNVVLNGGDPDYVALLPS 693
            L    +  S  + L + CT        +SF +++AP+D            PD   L+ S
Sbjct: 540 PLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID---------EHFPDDAPLISS 590

Query: 694 GFAILP-----DGTS-------LHGANIGEAA-----------SGGSLLTVAFQI----- 725
           GF ++P     DG S           ++G AA           S  S+LT+AFQ      
Sbjct: 591 GFRVIPLDVKTDGVSSGRTLDLASSLDVGSAAPQASGESPDDCSLRSVLTIAFQFPYEMH 650

Query: 726 LVDSV 730
           L DSV
Sbjct: 651 LQDSV 655


>gi|18076738|emb|CAC84276.1| HD-Zip protein [Zinnia violacea]
          Length = 838

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 159/672 (23%), Positives = 249/672 (37%), Gaps = 160/672 (23%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRA-------DNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRL 201
            +R E ++L++ N KL A       +N R ++ +S                     HL  
Sbjct: 76  -QRKEASRLQSVNRKLTAMNKLLMEENDRLQKQVS---------------------HLVY 113

Query: 202 ENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGA 261
           EN   R+     +                           LA  +   +  +  G+ +  
Sbjct: 114 ENGCFRQHTQNGA---------------------------LATKDTSCESVVTSGQRH-- 144

Query: 262 ADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF 321
              L     P +A    ++ +A   + E +  A            GTA    +   ++  
Sbjct: 145 ---LTPQHPPGDASPAGLLSIAEETLTEFLSKAT-----------GTAVEWVQMPGMKPG 190

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C   A+R   +V +    + EIL D   W      +      L+VL T
Sbjct: 191 PDSIGIVSISHGCTGVAARACGLVSLEPTRVAEILKDRTSWYRDCRAVD----VLDVLPT 246

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL---RPSP 436
                  G ++++  +   P+ L   R+   +RY     +G+  V + SL N    +  P
Sbjct: 247 A----NGGTIELLYMQLYAPTTLATGRDFLLLRYTSVIEDGSLVVCERSLANTPNGQSIP 302

Query: 437 AV----RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
           +V    R    PSG LI+    G S +  V+H+ ++   V  + + L  +      K  +
Sbjct: 303 SVPNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMNLEAWSVPEVLRPLYESSTVIAQKTTM 362

Query: 493 ATLDRQCERLAS-VMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTW 550
             L RQ  ++A  V  TN P        N   R + L+ L++R+   F   V+  T   W
Sbjct: 363 MAL-RQLRQIAQEVSQTNTP--------NWGRRPAALRALSQRLSRGFNEAVNGFTDEGW 413

Query: 551 TTLSGTGADDVRVMTRKSVD---------DPGRPP--GIVLSAATSFWLP--VPPKRVFD 597
           +  S  G DDV +    S +           G P     VL A  S  LP  VPP  +  
Sbjct: 414 SLTSNDGMDDVTIHVNSSPEKLMGLNLSFSNGYPSLNTAVLCAKASMLLPPNVPPALLLR 473

Query: 598 FLRDENTRSEWDILSN-------------------------GGVVQEMAHIANGRDTGNC 632
           FLR+   RSEW   +N                         G V+  +A      +    
Sbjct: 474 FLREH--RSEWADNNNVDAYSAAAVKLGPCSLLGTRAGNFGGQVILPLAQTIEHEELLEV 531

Query: 633 VSLLRVNCLQSANSSQSNMLILQE-SCTDPTA----SFVIYAPVDIVAMNVVLNGGDPDY 687
           + L  V           +M  LQ  S  D  A    S +I+AP+D             D 
Sbjct: 532 IKLEGVGLCPEDALMGRDMFFLQLCSGIDENAVGMCSELIFAPID---------ASFADD 582

Query: 688 VALLPSGFAILP 699
             LLPSGF I+P
Sbjct: 583 APLLPSGFRIMP 594


>gi|357156427|ref|XP_003577453.1| PREDICTED: homeobox-leucine zipper protein HOX33-like [Brachypodium
           distachyon]
          Length = 875

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 162/726 (22%), Positives = 279/726 (38%), Gaps = 185/726 (25%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R+++ R+      +EP Q+K WFQN+R + K  
Sbjct: 43  KYVRYTPEQVEALERVYTECPKPSSLRRQQIIRDCPILCNIEPKQIKVWFQNRRCREK-- 100

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E+++++T N KL A N    E                            EN RL++
Sbjct: 101 -QRKESSRMQTVNRKLTAMNKLLME----------------------------ENDRLQK 131

Query: 209 EIDRI--SAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLR 266
           ++ R+    ++AK +   + N               A  +   +  +  G+ +      +
Sbjct: 132 QVSRLVYENMSAKSLKTQLRN------------ASAATTDTSCESVVTSGQHHQQ----Q 175

Query: 267 SISAPT---EADKPM-IIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFP 322
           + +AP    +A+ P  ++ +A   + E +  A            GTA    +   ++  P
Sbjct: 176 NPAAPRPQRDANNPAGLLAIAEETLAEFLSKAT-----------GTAVEWVQMVGMKPGP 224

Query: 323 RGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTG 380
             IG       C   A+R   +V +    + EIL D   W             +++L   
Sbjct: 225 DSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSW-------YRDCRCVDILHVI 277

Query: 381 VAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA--- 437
             GN  G ++++  +   P+ LV  R+ + +RY     +G+  + + SL      P+   
Sbjct: 278 PTGN-GGTIELIYMQTYAPTTLVAPRDFWTLRYTSGLEDGSLVICERSLTQSTGGPSGPN 336

Query: 438 ----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVA 493
               +R    PSG LI+    G S +  V+HV++D   V  + + L  +      K  +A
Sbjct: 337 TPNFIRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKTTIA 396

Query: 494 TLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWT 551
            L R   ++A   +  IP G         GR+   +   ++R+   F   VS      W+
Sbjct: 397 AL-RHIRQIAHESSGEIPYGA--------GRQPAVLRTFSQRLSRGFNDAVSGFPDDGWS 447

Query: 552 TLSGTGADDVRVMTRKSVDDPG----RPP--------GIVLSAATSFWLPVPPKRVFDFL 599
            LS  G++D+ +    S +        P         GI+ + A+     VPP  +  FL
Sbjct: 448 LLSSDGSEDITITVNSSPNKLAGSHVSPSPLFSAIGGGILCAKASMLLQNVPPALLVRFL 507

Query: 600 RDENTRSEWDI--------------------LSNGG-----VVQEMAHIANGRDTGNCVS 634
           R+   RSEW                      L  GG     V+  +AH     +      
Sbjct: 508 REH--RSEWADPGVDAYSAASLRASPYAVPGLRAGGFMGSQVILPLAHTLEHEE------ 559

Query: 635 LLRVNCLQSANSSQSNMLILQE-------SCTDPTASF----VIYAPVDIVAMNVVLNGG 683
            L V  L+    S   +L+ ++       S  D  A+     +++AP+D           
Sbjct: 560 FLEVLRLEGHGFSHDEVLLARDMYLLQLCSGVDENAAGACAQLVFAPID---------ES 610

Query: 684 DPDYVALLPSGFAILPDGT---------SLHGANIGEAASGGSL---------------L 719
             D   LLPSGF ++P  T         +L  A+  E  SGG+L               L
Sbjct: 611 FADDAPLLPSGFRVIPLDTKTDVPSATRTLDLASALEVGSGGALRGSSDASGTCNMRSVL 670

Query: 720 TVAFQI 725
           T+AFQ 
Sbjct: 671 TIAFQF 676


>gi|115454289|ref|NP_001050745.1| Os03g0640800 [Oryza sativa Japonica Group]
 gi|75119691|sp|Q6AST1.1|HOX32_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX32; AltName:
           Full=HD-ZIP protein HOX32; AltName: Full=Homeodomain
           transcription factor HOX32; AltName: Full=OsHox32
 gi|50881435|gb|AAT85280.1| homeobox leucine-zipper protein, putative [Oryza sativa Japonica
           Group]
 gi|108710033|gb|ABF97828.1| class III HD-Zip protein 4, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113549216|dbj|BAF12659.1| Os03g0640800 [Oryza sativa Japonica Group]
 gi|215737063|dbj|BAG95992.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 859

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 167/749 (22%), Positives = 290/749 (38%), Gaps = 167/749 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 32  KYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 89

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                            EN RL++
Sbjct: 90  -QRKEASRLQTVNRKLTAMNKLLME----------------------------ENDRLQK 120

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ R+      Y+ + + N        PS    +A  +   +  +  G+ +   +   + 
Sbjct: 121 QVSRL-VYENGYMRQQLHN--------PS----VATTDTSCESVVTSGQHHQQQNPA-AT 166

Query: 269 SAPTEADKPM-IIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
               +A+ P  ++ +A   + E +  A            GTA    +   ++  P  IG 
Sbjct: 167 RPQRDANNPAGLLAIAEETLAEFLSKAT-----------GTAVDWVQMVGMKPGPDSIGI 215

Query: 328 KPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                 C   A+R   +V +    + EIL D   W             ++VL     GN 
Sbjct: 216 IAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSW-------YRDCRCVDVLHVIPTGN- 267

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------V 438
            G ++++  +   P+ L   R+ + +RY     +G+  + + SL      P+       V
Sbjct: 268 GGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQSTGGPSGPNTPNFV 327

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R    PSG LI+    G S +  V+HV++D   V  + + L  +      K  +A L R 
Sbjct: 328 RAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAAL-RH 386

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGT 556
             ++A   +  +P G         GR+   +   ++R+   F   V+      W+ +S  
Sbjct: 387 IRQIAHESSGEMPYG--------GGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSD 438

Query: 557 GADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENT 604
           GA+DV +    S +                  GI+ + A+     VPP  +  FLR+   
Sbjct: 439 GAEDVTIAFNSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALLVRFLREH-- 496

Query: 605 RSEWDI--------------------LSNGG-----VVQEMAHIANGRDTGNCVSLLRVN 639
           RSEW                      L  GG     V+  +AH     +    + L   +
Sbjct: 497 RSEWADPGVDAYSAAALRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEVIRLEGHS 556

Query: 640 CLQSANSSQSNMLILQE-SCTDPTASF----VIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
                     +M +LQ  S  D  A+     +++AP+D             D   LLPSG
Sbjct: 557 LCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPID---------ESFADDAPLLPSG 607

Query: 695 FAILP-DGT--------SLHGANIGEAASGG---------------SLLTVAFQILVDSV 730
           F ++P DG         +L  A+  E  SGG               S+LT+AFQ   ++ 
Sbjct: 608 FRVIPLDGKTDAPSATRTLDLASTLEVGSGGTTRASSDTSSTCNTRSVLTIAFQFSYENH 667

Query: 731 PTAKLSLGSVATVNNLIACTVERIKASLS 759
               ++  +   V  ++A +V+R+  +++
Sbjct: 668 LRESVAAMARQYVRTVVA-SVQRVAMAIA 695


>gi|187609448|sp|A2XK30.1|HOX32_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX32; AltName:
           Full=HD-ZIP protein HOX32; AltName: Full=Homeodomain
           transcription factor HOX32; AltName: Full=OsHox32
 gi|125545051|gb|EAY91190.1| hypothetical protein OsI_12798 [Oryza sativa Indica Group]
          Length = 859

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 167/749 (22%), Positives = 290/749 (38%), Gaps = 167/749 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 32  KYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 89

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                            EN RL++
Sbjct: 90  -QRKEASRLQTVNRKLTAMNKLLME----------------------------ENDRLQK 120

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ R+      Y+ + + N        PS    +A  +   +  +  G+ +   +   + 
Sbjct: 121 QVSRL-VYENGYMRQQLHN--------PS----VATTDTSCESVVTSGQHHQQQNPA-AT 166

Query: 269 SAPTEADKPM-IIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
               +A+ P  ++ +A   + E +  A            GTA    +   ++  P  IG 
Sbjct: 167 RPQRDANNPAGLLAIAEETLAEFLSKAT-----------GTAVDWVQMVGMKPGPDSIGI 215

Query: 328 KPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                 C   A+R   +V +    + EIL D   W             ++VL     GN 
Sbjct: 216 IAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSW-------YRDCRCVDVLHVIPTGN- 267

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------V 438
            G ++++  +   P+ L   R+ + +RY     +G+  + + SL      P+       V
Sbjct: 268 GGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQSTGGPSGPNTPNFV 327

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R    PSG LI+    G S +  V+HV++D   V  + + L  +      K  +A L R 
Sbjct: 328 RAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAAL-RH 386

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGT 556
             ++A   +  +P G         GR+   +   ++R+   F   V+      W+ +S  
Sbjct: 387 IRQIAHESSGEMPYG--------GGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSD 438

Query: 557 GADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENT 604
           GA+DV +    S +                  GI+ + A+     VPP  +  FLR+   
Sbjct: 439 GAEDVTIAFNSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALLVRFLREH-- 496

Query: 605 RSEWDI--------------------LSNGG-----VVQEMAHIANGRDTGNCVSLLRVN 639
           RSEW                      L  GG     V+  +AH     +    + L   +
Sbjct: 497 RSEWADPGVDAYSAAALRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEVIRLEGHS 556

Query: 640 CLQSANSSQSNMLILQE-SCTDPTASF----VIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
                     +M +LQ  S  D  A+     +++AP+D             D   LLPSG
Sbjct: 557 LCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPID---------ESFADDAPLLPSG 607

Query: 695 FAILP-DGT--------SLHGANIGEAASGG---------------SLLTVAFQILVDSV 730
           F ++P DG         +L  A+  E  SGG               S+LT+AFQ   ++ 
Sbjct: 608 FRVIPLDGKTDAPSATRTLDLASTLEVGSGGTTRASSDTSSTCNTRSVLTIAFQFSYENH 667

Query: 731 PTAKLSLGSVATVNNLIACTVERIKASLS 759
               ++  +   V  ++A +V+R+  +++
Sbjct: 668 LRESVAAMARQYVRTVVA-SVQRVAMAIA 695


>gi|162462024|ref|NP_001105533.1| rolled leaf1 [Zea mays]
 gi|40950648|gb|AAR97952.1| rolled leaf1 [Zea mays]
          Length = 840

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 160/713 (22%), Positives = 265/713 (37%), Gaps = 162/713 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 27  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQNRRCRDKQR 86

Query: 149 HERHE----NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            E       N +L   N+ L  +N R ++ +S                      L  ENA
Sbjct: 87  KESSRLQAVNRKLTAMNKLLMEENERLQKQVS---------------------QLVHENA 125

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL 264
            +R+++   S          V      +PP P                            
Sbjct: 126 HMRQQLQNTSLANDTSCESNVT-----TPPNP---------------------------- 152

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRG 324
           +R  S P+                 L+ +A+     +++   GTA    +   ++  P  
Sbjct: 153 IRDASNPSG----------------LLAIAEETFTEFLSKATGTAIDWVQMPGMKPGPDS 196

Query: 325 IGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVA 382
           +G       C   A+R   +V +     +EIL D   W            +LEV +   A
Sbjct: 197 VGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSW-------FRDCRSLEVFTRFPA 249

Query: 383 GNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP------ 436
           GN  G ++++  +   P+ LVP R+ + +RY     +G+  V + SL      P      
Sbjct: 250 GN-GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNAASTQ 308

Query: 437 -AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATL 495
             VR    PSG L++    G S V  V+H++++   V  + + L  +      K     L
Sbjct: 309 QFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVAL 368

Query: 496 DRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTL 553
            R   ++A   +        G +    GR+   +   ++R+   F   +S      W+ +
Sbjct: 369 -RHLRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVM 419

Query: 554 SGTGADDVRVM---TRKSVDDP------GRPPGIVLSAATSFWLPVPPKRVFDFLRDENT 604
            G G +DV +    T+K  +        G P GI+ + A+     VPP  +  FLR+   
Sbjct: 420 GGDGIEDVVIACNSTKKIRNTSNAGITFGAPGGIICAKASMLLQSVPPAVLVRFLREH-- 477

Query: 605 RSEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVN 639
           RSEW                            S G ++  +AH     +    V L    
Sbjct: 478 RSEWADYNIDAYLASSLKTSACSLPGLRPMRFSEGQMIMPLAHTVENEEILEVVRL-EGQ 536

Query: 640 CLQSANSSQSNMLILQESCT-----DPTASF-VIYAPVDIVAMNVVLNGGDPDYVALLPS 693
            L    +  S  + L + CT        +SF +++AP+D            PD   L+ S
Sbjct: 537 PLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID---------EHFPDDAPLISS 587

Query: 694 GFAILPDGTSLHGANIGEAASGGSLLTV---AFQILVDSVPTAKLSLGSVATV 743
           GF ++P      G + G      S L V   A Q   D+ P    SL SV T+
Sbjct: 588 GFRVIPLDVKTDGVSSGRTLDLASSLDVGSAAPQASGDASPD-DCSLRSVLTI 639


>gi|383127049|gb|AFG44154.1| Pinus taeda anonymous locus 0_11087_01 genomic sequence
          Length = 100

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/94 (57%), Positives = 70/94 (74%)

Query: 665 FVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQ 724
            VIYAPV+I A++ V+NG D   VALLPSGF ILP+G     + I      G++LT+AFQ
Sbjct: 1   MVIYAPVEISAIHQVMNGNDSINVALLPSGFVILPEGPPESRSVIDNRQVEGTILTIAFQ 60

Query: 725 ILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           ILV+ +P+AKL+L SV TVNNLI+CT +RIKA+L
Sbjct: 61  ILVNDLPSAKLTLESVETVNNLISCTAQRIKAAL 94


>gi|242070537|ref|XP_002450545.1| hypothetical protein SORBIDRAFT_05g006728 [Sorghum bicolor]
 gi|241936388|gb|EES09533.1| hypothetical protein SORBIDRAFT_05g006728 [Sorghum bicolor]
          Length = 224

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 81/139 (58%), Gaps = 16/139 (11%)

Query: 392 MTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------------- 437
           M AE  V SP +  R+  ++RY K+  EG WAVVDVS+D +   PA              
Sbjct: 1   MNAELWVQSPRLLNRKINFLRYNKRVAEGQWAVVDVSVDGILGPPAGSRTTDAAAVANNT 60

Query: 438 VRCRRRPSGCLIQEMP--NGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATL 495
              R   SGCLI++M   NGY K+TWV H E D+  V +L++ L+ +G AFGA RW+A+L
Sbjct: 61  TGYRLLLSGCLIEDMGKGNGYCKITWVVHAEYDETMVPSLFRPLLCSGKAFGAHRWLASL 120

Query: 496 DRQCERLASVMATNIPTGE 514
            RQ + LA + ++ +P G+
Sbjct: 121 QRQYQYLAVLHSSQVPRGD 139



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 16/80 (20%)

Query: 395 EFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA--------------VRC 440
           E  V SP +  R+  ++RY K+  EG WAVVDVS+D +   PA                C
Sbjct: 145 ELWVQSPRLLNRKINFLRYNKRVAEGQWAVVDVSVDGILGPPAGSRTTDAAAVANNTTGC 204

Query: 441 RRRPSGCLIQEM--PNGYSK 458
           R   SGCLI++M   NGY K
Sbjct: 205 RLLLSGCLIEDMGKGNGYCK 224


>gi|223975951|gb|ACN32163.1| unknown [Zea mays]
 gi|413957207|gb|AFW89856.1| rolled leaf1 isoform 1 [Zea mays]
 gi|413957208|gb|AFW89857.1| rolled leaf1 isoform 2 [Zea mays]
          Length = 842

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 159/715 (22%), Positives = 265/715 (37%), Gaps = 181/715 (25%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 30  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQNRRCRDKQR 89

Query: 149 HERHE----NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            E       N +L   N+ L  +N R ++ +S                      L  ENA
Sbjct: 90  KESSRLQAVNRKLTAMNKLLMEENERLQKQVS---------------------QLVHENA 128

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL 264
            +R+++   S          V      +PP P                            
Sbjct: 129 HMRQQLQNTSLANDTSCESNVT-----TPPNP---------------------------- 155

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRG 324
           +R  S P+                 L+ +A+     +++   GTA    +   ++  P  
Sbjct: 156 IRDASNPSG----------------LLAIAEETFTEFLSKATGTAIDWVQMPGMKPGPDS 199

Query: 325 IGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVA 382
           +G       C   A+R   +V +     +EIL D   W            +LEV +   A
Sbjct: 200 VGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSW-------FRDCRSLEVFTRFPA 252

Query: 383 GNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP------ 436
           GN  G ++++  +   P+ LVP R+ + +RY     +G+  V + SL      P      
Sbjct: 253 GN-GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNAASTQ 311

Query: 437 -AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATL 495
             VR    PSG L++    G S V  V+H++++   V  + + L  +      K     L
Sbjct: 312 QFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVAL 371

Query: 496 DRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTL 553
            R   ++A   +        G +    GR+   +   ++R+   F   +S      W+ +
Sbjct: 372 -RHLRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVM 422

Query: 554 SGTGADDVRVM---TRKSVDDP------GRPPGIVLSAATSFWLPVPPKRVFDFLRDENT 604
            G G +DV +    T+K  +        G P GI+ + A+     VPP  +  FLR+   
Sbjct: 423 GGDGIEDVVIACNSTKKIRNTSNAGITFGAPGGIICAKASMLLQSVPPAVLVRFLREH-- 480

Query: 605 RSEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVN 639
           RSEW                            S G ++  +AH     +    V L    
Sbjct: 481 RSEWADYNIDAYLASSLKTSACSLPGLRPMRFSEGQMIMPLAHTVENEEILEVVRL-EGQ 539

Query: 640 CLQSANSSQSNMLILQESCT-----DPTASF-VIYAPVDIVAMNVVLNGGDPDYVALLPS 693
            L    +  S  + L + CT        +SF +++AP+D            PD   L+ S
Sbjct: 540 PLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID---------EHFPDDAPLISS 590

Query: 694 GFAILP-----DGTS-------LHGANIGEAA-----------SGGSLLTVAFQI 725
           GF ++P     DG S           ++G AA           S  S+LT+AFQ 
Sbjct: 591 GFRVIPLDVKTDGVSSGRTLDLASSLDVGSAAPQASGESPDDCSLRSVLTIAFQF 645


>gi|357513433|ref|XP_003627005.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
 gi|355521027|gb|AET01481.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
          Length = 832

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 153/739 (20%), Positives = 280/739 (37%), Gaps = 157/739 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 15  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPRQIKVWFQNRRCREKQ- 73

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E+ +L+  N +                TA+ ++      L  EN RL++
Sbjct: 74  ---------RKESFRLQGVNRKL---------------TAMNKL------LMEENDRLQK 103

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++  +      Y  +   N               A  +      +  G+       + S 
Sbjct: 104 QVSHL-VYENGYFRQNTQN---------------ATKDTSCDSVVTSGQHN-----MTSQ 142

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 143 HPPRDASPAGLLSIAEETLAEFLSKAT-----------GTAVEWVQMPGMKPGPDSIGIV 191

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W             +++++     N  
Sbjct: 192 AISHGCTGVAARACGLVGLEPTRVAEILKDRPLW-------FRDCRAVDIVNVLPTAN-G 243

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  + + SL N +  P+       VR
Sbjct: 244 GTIELLYMQLYAPTTLAPARDFWLLRYTSVVEDGSLVICERSLKNTQNGPSMPPVPHFVR 303

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L R  
Sbjct: 304 ADMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESPMVLAQKTTMAAL-RHL 362

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            +++  ++    TG         GR+  ++  L++R+   F   ++  T   WT +   G
Sbjct: 363 RQISHEVSQPNVTGW--------GRRPAALRALSQRLSRGFNEALNGFTDEGWTMMGNDG 414

Query: 558 ADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            DDV ++   S D             P     ++ + A+     VPP  +  FLR+   R
Sbjct: 415 VDDVTILVNSSPDKLMGLNLSFGNGFPSVSNAVLCAKASMLLQNVPPAILLRFLREH--R 472

Query: 606 SEW-----DILS-------------------NGGVVQEMAHIANGRDTGNCVSLLRVNCL 641
           SEW     D  +                    G V+  +AH     +    + L  V   
Sbjct: 473 SEWADHNMDAYTAAAIKVGPCSLTGSRVGNYGGQVILPLAHTIEHEEFLEVIKLDGVA-- 530

Query: 642 QSANSSQSNMLILQESCTD------PTASFVIYAPVD---------------IVAMNVVL 680
            S     +  L L + C+        T + +I+AP+D               I+ +    
Sbjct: 531 HSPEEMMARELFLLQLCSGMDENAIGTCAELIFAPIDASFADDAPLLPSGFRIIPLESGK 590

Query: 681 NGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSV 740
               P+    L S   I P G      N G +    S++T+AF+   +S     ++  + 
Sbjct: 591 ESSSPNRTLDLASALDIGPTGNRASSDNAGNSGCVRSVMTIAFEFAYESHMQENVACMAR 650

Query: 741 ATVNNLIACTVERIKASLS 759
             V ++I+ +V+R+  +LS
Sbjct: 651 QYVRSIIS-SVQRVALALS 668


>gi|38198211|dbj|BAD01502.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 838

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 158/673 (23%), Positives = 249/673 (36%), Gaps = 162/673 (24%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEH--------HLR 200
            +R E ++L++ N KL                      TA+ ++  +E+        HL 
Sbjct: 76  -QRKEASRLQSVNRKL----------------------TAMNKLLMEENDRLQKQVSHLV 112

Query: 201 LENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYG 260
            EN   R+     +                           LA  +   +  +  G+ + 
Sbjct: 113 YENGCFRQHTQNGA---------------------------LATKDTSCESVVTSGQRH- 144

Query: 261 AADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRT 320
               L     P +A    ++ +A   + E +  A            GTA    +   ++ 
Sbjct: 145 ----LTPQHPPGDASPAGLLSIAEETLTEFLSKAT-----------GTAVEWVQMPGMKP 189

Query: 321 FPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLS 378
            P  IG       C   A+R   +V +    + EIL D   W      +      L+VL 
Sbjct: 190 GPDSIGIVSISHGCTGVAARACGLVSLEPTRVAEILKDRTSWYRDCRAVD----VLDVLP 245

Query: 379 TGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL---RPS 435
           T       G ++++  +   P+ L   R+   +RY     +G+  V + SL N    +  
Sbjct: 246 TA----NGGTIELLYMQLYAPTTLATGRDFLLLRYTSVIEDGSLVVCERSLANTPNGQSI 301

Query: 436 PAV----RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRW 491
           P+V    R    PSG LI+    G S +  V+H+ ++   V  + + L  +      K  
Sbjct: 302 PSVPNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMNLEAWSVPEVLRPLYESSTVIAQKTT 361

Query: 492 VATLDRQCERLAS-VMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHT 549
           +  L RQ  ++A  V  TN P        N   R + L+ L++R+   F   V+  T   
Sbjct: 362 MMAL-RQLRQIAQEVSQTNTP--------NWGRRPAALRALSQRLSRGFNEAVNGFTDEG 412

Query: 550 WTTLSGTGADDVRVMTRKSVD---------DPGRPP--GIVLSAATSFWLP--VPPKRVF 596
           W+  S  G DDV +    S +           G P     VL A  S  LP  VPP  + 
Sbjct: 413 WSLTSNDGMDDVTIHVNSSPEKLMGLNLSFSNGYPSLNTAVLCAKASMLLPPNVPPALLL 472

Query: 597 DFLRDENTRSEWDILSN-------------------------GGVVQEMAHIANGRDTGN 631
            FLR+   RSEW   +N                         G V+  +A      +   
Sbjct: 473 RFLREH--RSEWADNNNVDAYSAAAVKLGPCSLLGTRAGNFGGQVILPLAQTIEHEELLE 530

Query: 632 CVSLLRVNCLQSANSSQSNMLILQE-SCTDPTA----SFVIYAPVDIVAMNVVLNGGDPD 686
            + L  V           +M  LQ  S  D  A    S +I+AP+D             D
Sbjct: 531 VIKLEGVGLCPEDALMGRDMFFLQLCSGIDENAVGMCSELIFAPID---------ASFAD 581

Query: 687 YVALLPSGFAILP 699
              LLPSGF I+P
Sbjct: 582 DAPLLPSGFRIMP 594


>gi|242033571|ref|XP_002464180.1| hypothetical protein SORBIDRAFT_01g013710 [Sorghum bicolor]
 gi|241918034|gb|EER91178.1| hypothetical protein SORBIDRAFT_01g013710 [Sorghum bicolor]
          Length = 854

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 164/718 (22%), Positives = 278/718 (38%), Gaps = 172/718 (23%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 27  KYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 84

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL                      TA+ ++      L  EN RL++
Sbjct: 85  -QRKEASRLQTVNRKL----------------------TAMNKL------LMEENDRLQK 115

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ R+      Y+ + + N        PS     A  +   +  +  G+ +      ++ 
Sbjct: 116 QVSRL-VYENGYMRQQLHN--------PS----AATTDTSCESVVTSGQHHQQ----QNP 158

Query: 269 SAPT---EADKPM-IIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRG 324
           +AP    +A+ P  ++ +A   + E +  A            GTA    +   ++  P  
Sbjct: 159 AAPRPQRDANNPAGLLAIAEETLAEFLSKAT-----------GTAVDWVQMVGMKPGPDS 207

Query: 325 IGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVA 382
           IG       C   A+R   +V +    + EIL D   W             +++L     
Sbjct: 208 IGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSW-------YRDCRCVDILHVIPT 260

Query: 383 GNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA----- 437
           GN  G ++++  +   P+ L   R+ + +RY     +G+  + + SL      P+     
Sbjct: 261 GN-GGTIELIYMQTYAPTTLAAPRDFWTLRYTSGLEDGSLVICERSLTQSTGGPSGPNTP 319

Query: 438 --VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATL 495
             VR    PSG LI+    G S +  V+HV++D   V  + + L  +      K  +A L
Sbjct: 320 NFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKTTIAAL 379

Query: 496 DRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTL 553
            R   ++A   +  +P G         GR+   +   ++R+   F   V+      W+ +
Sbjct: 380 -RHIRQIAHESSGEMPYG--------GGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWSLM 430

Query: 554 SGTGADDVRVMTRKSVDDPGRPP------------GIVLSAATSFWLPVPPKRVFDFLRD 601
           S  GA+DV +    S +    P             GI+ + A+     VPP  +  FLR+
Sbjct: 431 SSDGAEDVTIAINSSPNKLIGPHVNSSQLFTTIGGGILCAKASMLLQNVPPALLVRFLRE 490

Query: 602 ENTRSEW-----DILSNGG--------------------VVQEMAHIANGRDTGNCVSLL 636
              RSEW     D  S                       V+  +AH     +    + L 
Sbjct: 491 H--RSEWADPGVDAYSAAALRASPYAVPGLRASGFMGSQVILPLAHTLEHEEFLEVIRLE 548

Query: 637 RVNCLQSANSSQSNMLILQE-SCTDPTASF----VIYAPVDIVAMNVVLNGGDPDYVALL 691
             +          +M +LQ  S  D  A+     +++AP+D             D   LL
Sbjct: 549 GHSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPID---------ESFADDAPLL 599

Query: 692 PSGFAIL--------PDGT-SLHGANIGEAASGG---------------SLLTVAFQI 725
           PSGF ++        P GT +L  A+  E  SGG               S+LT+AFQ 
Sbjct: 600 PSGFRVIPLDAKTDPPSGTRTLDLASTLEVGSGGTTRASSDASSTCNTRSVLTIAFQF 657


>gi|242070533|ref|XP_002450543.1| hypothetical protein SORBIDRAFT_05g006724 [Sorghum bicolor]
 gi|241936386|gb|EES09531.1| hypothetical protein SORBIDRAFT_05g006724 [Sorghum bicolor]
          Length = 282

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/136 (41%), Positives = 80/136 (58%), Gaps = 16/136 (11%)

Query: 395 EFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA--------------VRC 440
           E  V SP +  R+  ++RY K+  EG WAVVDVS+D +   PA                C
Sbjct: 62  ELWVQSPRLLNRKINFLRYNKRVAEGQWAVVDVSVDGILGPPAGSRTTDAAAVANNTTGC 121

Query: 441 RRRPSGCLIQEMP--NGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R   SGCLI++M   NGY K+T V H E D+  V  L++ L+ +GNAFGA+RW+A+L RQ
Sbjct: 122 RLLLSGCLIEDMGKGNGYCKITRVVHAEYDETMVPTLFRPLLRSGNAFGAQRWLASLQRQ 181

Query: 499 CERLASVMATNIPTGE 514
            E LA + ++ +P G+
Sbjct: 182 YEYLAVLHSSQVPRGD 197



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 38/56 (67%)

Query: 459 VTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGE 514
           +T V H E D+  V  L++ L+ +GNAFGA+RW+A+L RQ E LA + ++ +  G+
Sbjct: 1   ITRVVHAEYDETMVPTLFRPLLRSGNAFGAQRWLASLQRQYEYLAVLHSSQVARGD 56



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 16/80 (20%)

Query: 395 EFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR--------------PSPAVRC 440
           E  V SP +  R+  ++RY K+  EG WAV+DVS+D +                +    C
Sbjct: 203 ELWVQSPRLLNRKINFLRYNKRVAEGQWAVMDVSVDGILGLLAGSRTIDAAAVANNTTGC 262

Query: 441 RRRPSGCLIQEM--PNGYSK 458
           R   SGCLI++M   NGY K
Sbjct: 263 RLLLSGCLIEDMGKGNGYCK 282


>gi|23495870|dbj|BAC20079.1| homeobox 1-like protein [Oryza sativa Japonica Group]
          Length = 252

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 50/112 (44%), Positives = 75/112 (66%), Gaps = 5/112 (4%)

Query: 405 TRESYYVRYCKQHGEGTWAVVDVSLDNLRPS----PAVRCRRRPSGCLIQEMPNGYSKVT 460
            +E  +VRYC+Q  +G WA+ D+ ++  R +    P +R RR PSGCLI  M N YS+VT
Sbjct: 71  AQEVNFVRYCRQIEQGLWAITDIFVNLQRDAYFGVPPLRSRRLPSGCLIANMANSYSEVT 130

Query: 461 WVEHVEVDDRG-VHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIP 511
            VEH+EV+++  ++ LY+ LV +G+ FGA  W+A L R C+R AS++A  +P
Sbjct: 131 RVEHMEVEEKNPINVLYRDLVLSGDVFGAHCWLAALQRACDRYASLVALGVP 182


>gi|356533332|ref|XP_003535219.1| PREDICTED: uncharacterized protein LOC100788238 [Glycine max]
          Length = 483

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/146 (45%), Positives = 77/146 (52%), Gaps = 20/146 (13%)

Query: 466 EVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK 525
           EV    +  LY  LV+ G        +  L   C  L    A  +P G + V   +D  K
Sbjct: 357 EVVKGAIFMLYALLVAFG-------LIKALPLTCIFLC---ALTLPMGNLVVRFVEDNYK 406

Query: 526 SMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATS 585
              K+   M   FC  + A        L G       V+ RKSVDDPGRPPGIVLSAATS
Sbjct: 407 DKNKIF--MAKYFCVRLHA--------LFGVALALGLVLARKSVDDPGRPPGIVLSAATS 456

Query: 586 FWLPVPPKRVFDFLRDENTRSEWDIL 611
           FWLPVPPKRVFDFLRDEN+R+E  IL
Sbjct: 457 FWLPVPPKRVFDFLRDENSRNEVFIL 482


>gi|187471155|sp|A2XBL9.2|HOX10_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX10; AltName:
           Full=HD-ZIP protein HOX10; AltName: Full=Homeodomain
           transcription factor HOX10; AltName: Full=OsHB1;
           AltName: Full=OsHox10
          Length = 839

 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 154/684 (22%), Positives = 262/684 (38%), Gaps = 151/684 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 27  KYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCRDKQ- 85

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E+ +L+A N +                TA+ ++      L  EN RL++
Sbjct: 86  ---------RKESSRLQAVNRKL---------------TAMNKL------LMEENERLQK 115

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++    A ++ + + N PL                  A        +    + LR  
Sbjct: 116 QVSQLVHENA-HMRQQLQNTPL------------------ANDTSCESNVTTPQNPLRDA 156

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
           S P+      ++ +A   + E +  A            GTA    +   ++  P  +G  
Sbjct: 157 SNPSG-----LLSIAEETLTEFLSKAT-----------GTAIDWVQMPGMKPGPDSVGIV 200

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    +VEIL D   W             LEV +   AGN  
Sbjct: 201 AISHGCRGVAARACGLVNLEPTKVVEILKDRPSW-------FRDCRNLEVFTMIPAGN-G 252

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ LVP R+ + +RY     +G+  V + SL      P+       VR
Sbjct: 253 GTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQYVR 312

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG L++    G S V  V+H++++   V  + + L  +      K   A L R  
Sbjct: 313 AEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAAL-RHI 371

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            ++A   +        G +    GR+   +   ++R+   F   +S      W+ + G G
Sbjct: 372 RQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMGGDG 423

Query: 558 ADDVRVM---TRKSVDDP------GRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
            +DV +    T+K   +       G P GI+ + A+     VPP  +  FLR+   RSEW
Sbjct: 424 VEDVVIACNSTKKIRSNSNAGIAFGAPGGIICAKASMLLQSVPPAVLVRFLREH--RSEW 481

Query: 609 DI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQS 643
                                       S   ++  +AH     +    V  L    L  
Sbjct: 482 ADYNIDAYLASTLKTSACSLPGLRPMRFSGSQIIIPLAHTVENEEILEVVR-LEGQPLTH 540

Query: 644 ANSSQSNMLILQESCT-----DPTASF-VIYAPVDIVAMNVVLNGGDPDYVALLPSGFAI 697
             +  S  + L + CT        +SF +++AP+D            PD   L+ SGF +
Sbjct: 541 DEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPIDDF----------PDETPLISSGFRV 590

Query: 698 LPDGTSLHGANIGEAASGGSLLTV 721
           +P      GA+ G      S L V
Sbjct: 591 IPLDMKTDGASSGRTLDLASSLEV 614


>gi|115450213|ref|NP_001048707.1| Os03g0109400 [Oryza sativa Japonica Group]
 gi|75128608|sp|Q6TAQ6.1|HOX10_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX10; AltName:
           Full=HD-ZIP protein HOX10; AltName: Full=Homeodomain
           transcription factor HOX10; AltName: Full=OsHB1;
           AltName: Full=OsHox10
 gi|37813100|gb|AAR04340.1| homeodomain leucine-zipper protein Hox10 [Oryza sativa Japonica
           Group]
 gi|108705779|gb|ABF93574.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
 gi|113547178|dbj|BAF10621.1| Os03g0109400 [Oryza sativa Japonica Group]
 gi|215717163|dbj|BAG95526.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 839

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 154/684 (22%), Positives = 262/684 (38%), Gaps = 151/684 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 27  KYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCRDKQ- 85

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E+ +L+A N +                TA+ ++      L  EN RL++
Sbjct: 86  ---------RKESSRLQAVNRKL---------------TAMNKL------LMEENERLQK 115

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++    A ++ + + N PL                  A        +    + LR  
Sbjct: 116 QVSQLVHENA-HMRQQLQNTPL------------------ANDTSCESNVTTPQNPLRDA 156

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
           S P+      ++ +A   + E +  A            GTA    +   ++  P  +G  
Sbjct: 157 SNPSG-----LLSIAEETLTEFLSKAT-----------GTAIDWVQMPGMKPGPDSVGIV 200

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    +VEIL D   W             LEV +   AGN  
Sbjct: 201 AISHGCRGVAARACGLVNLEPTKVVEILKDRPSW-------FRDCRNLEVFTMIPAGN-G 252

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ LVP R+ + +RY     +G+  V + SL      P+       VR
Sbjct: 253 GTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQYVR 312

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG L++    G S V  V+H++++   V  + + L  +      K   A L R  
Sbjct: 313 AEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAAL-RHI 371

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            ++A   +        G +    GR+   +   ++R+   F   +S      W+ + G G
Sbjct: 372 RQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMGGDG 423

Query: 558 ADDVRVM---TRKSVDDP------GRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
            +DV +    T+K   +       G P GI+ + A+     VPP  +  FLR+   RSEW
Sbjct: 424 VEDVVIACNSTKKIRSNSNAGIAFGAPGGIICAKASMLLQSVPPAVLVRFLREH--RSEW 481

Query: 609 DI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQS 643
                                       S   ++  +AH     +    V  L    L  
Sbjct: 482 ADYNIDAYLASTLKTSACSLTGLRPMRFSGSQIIIPLAHTVENEEILEVVR-LEGQPLTH 540

Query: 644 ANSSQSNMLILQESCT-----DPTASF-VIYAPVDIVAMNVVLNGGDPDYVALLPSGFAI 697
             +  S  + L + CT        +SF +++AP+D            PD   L+ SGF +
Sbjct: 541 DEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPIDDF----------PDETPLISSGFRV 590

Query: 698 LPDGTSLHGANIGEAASGGSLLTV 721
           +P      GA+ G      S L V
Sbjct: 591 IPLDMKTDGASSGRTLDLASSLEV 614


>gi|383212091|dbj|BAM08932.1| class III homeobox-leucine zipper protein [Asparagus asparagoides]
          Length = 839

 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 168/760 (22%), Positives = 301/760 (39%), Gaps = 174/760 (22%)

Query: 78  GASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQ 133
           G+SG   E+  +   +Y R+T  Q++ +E  +  CP P   +R++L RE      +EP Q
Sbjct: 12  GSSGG-LEKHMDSTGKYVRYTAEQVEALEKVYAVCPKPSSMRRQQLIRENPILSNIEPKQ 70

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMS 193
           +K WFQN+R + K           R E+ +L+A N +                TA+ ++ 
Sbjct: 71  IKVWFQNRRCREKQ----------RKESSRLQAVNRKL---------------TALNKL- 104

Query: 194 FDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGI 253
                L  EN RL++++ ++      Y+ + + N              +++GN  +   +
Sbjct: 105 -----LMEENERLQKQVAQL-VHENTYMKQQLQN--------------VSLGNDTSCESV 144

Query: 254 GGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLN 313
               +    + LR  S P       ++ +A   + E +  A            GTA    
Sbjct: 145 ----VTTPQNPLRDASNPAG-----LLSVAEETLTEFLSKAT-----------GTAVDWV 184

Query: 314 EDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRA 371
           +   ++  P  IG       C   A+R   +V +    + EIL D   W           
Sbjct: 185 QMPGMKPGPDSIGIVAISQTCSGVAARACGLVSLEPTKVAEILKDRPSW-------FRDC 237

Query: 372 MTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN 431
            +LEV +   AGN  G ++++  +   P+ L P R+ + +RY     +G+  V + SL  
Sbjct: 238 RSLEVFTMFPAGN-GGTIELVYMQMYAPTTLAPARDLWTLRYTTNLEDGSLVVCERSLRG 296

Query: 432 LRPSPAV-------RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGN 484
               P+        R    PSG LI+    G S V  V+H+ ++   V  + + L  +  
Sbjct: 297 SGGGPSAASAHQFARAEMFPSGFLIRPCDGGGSIVHIVDHLNLEPWSVPEVLRPLYESSR 356

Query: 485 AFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGV 542
               K   A L R   ++A  M+        G +    GR+   +   ++++   F   +
Sbjct: 357 VLAQKMTAAAL-RHIRQIAQEMS--------GEMVYPLGRQPAVLRTFSQKLSRGFNDAI 407

Query: 543 SASTAHTWTTLSGTGADDVRVMT---RKSVDDPG------RPPGIVLSAATSFWLPVPPK 593
           ++     W+ +   G +DV V T   +K+  D         P G+V + A+     VPP 
Sbjct: 408 NSFVDDGWSVMGCDGVEDVVVTTNSMKKTNSDANPVNAVTVPDGVVCAKASMLLQNVPPA 467

Query: 594 RVFDFLRDENTRSEW-----DILSNGGV-----------------VQEMAHIANGRDTGN 631
            +  FLR+   RSEW     D  S   +                  Q + H+A+  +   
Sbjct: 468 LLVRFLREH--RSEWADYNIDAYSASSLKAGSAFFPGLRSTRFSGSQTIMHLAHTVENEE 525

Query: 632 CVSLLRV--NCLQSANSSQSNMLILQESCT--DPTAS----FVIYAPVDIVAMNVVLNGG 683
            + ++R+    L    +  S  + L + C+  D  A+     +++AP+D +         
Sbjct: 526 LLEVVRLEGQALTQDEAILSRDIHLLQLCSGIDENAAGSCVQLVFAPIDELF-------- 577

Query: 684 DPDYVALLPSGFAILPDGTSLHGAN------------IGEAA--SGG----------SLL 719
            PD   LLPSGF ++P      G N            +G A   +GG          S+L
Sbjct: 578 -PDDAPLLPSGFRVIPLDCRPDGLNSNRTLDLASSLEVGSAVNRTGGEAAPSDYSLRSVL 636

Query: 720 TVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           T+AFQ   +      ++  +   V N+++  V+R+  +L+
Sbjct: 637 TIAFQFPYEFHLQESVAAMARQYVRNIVS-AVQRVSMALA 675


>gi|145324911|ref|NP_001077702.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
 gi|332194641|gb|AEE32762.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
          Length = 794

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 166/745 (22%), Positives = 286/745 (38%), Gaps = 167/745 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A                                    N  L E
Sbjct: 75  -QRKEASRLQAVNRKLTA-----------------------------------MNKLLME 98

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           E DR+    ++ V +   +Y     P PS P +    +   +  +  G+       L S 
Sbjct: 99  ENDRLQKQVSQLVHEN--SYFRQHTPNPSLPAK----DTSCESVVTSGQHQ-----LASQ 147

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
           +   +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 148 NPQRDASPAGLLSIAEETLAEFLSKAT-----------GTAVEWVQMPGMKPGPDSIGII 196

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EI+ D   W             +EV++     N  
Sbjct: 197 AISHGCTGVAARACGLVGLEPTRVAEIVKDRPSW-------FRECRAVEVMNVLPTAN-G 248

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  V + SL + +  P+       VR
Sbjct: 249 GTVELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVR 308

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
                SG LI+    G S +  V+H++++   V  + + L  +      K  +A L RQ 
Sbjct: 309 AEMLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAAL-RQL 367

Query: 500 ERLAS-VMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGT 556
           +++A  V  TN          N  GR+  ++  L++R+   F   V+  T   W+ + G 
Sbjct: 368 KQIAQEVTQTNSS-------VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVI-GD 419

Query: 557 GADDVRVMTRKSVDD---------PGRPP--GIVLSAATSFWLP-VPPKRVFDFLRDENT 604
             DDV +    S D           G  P   +VL A  S  L  VPP  +  FLR+   
Sbjct: 420 SMDDVTITVNSSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREH-- 477

Query: 605 RSEW---DILS------------------NGGVVQEMAHIANGRDTGNCVSLLRVNCLQS 643
           RSEW   +I +                   G V+  +AH     +    + L  +     
Sbjct: 478 RSEWADNNIDAYLAAAVKVGPCSARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPE 537

Query: 644 ANSSQSNMLILQ-----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL 698
                 ++ +LQ     +     T + +I+AP+D             D   LLPSGF I+
Sbjct: 538 DAIVPRDIFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRII 588

Query: 699 P------------------------DGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAK 734
           P                         GT       G +    S++T+AF+  ++S     
Sbjct: 589 PLDSAKEVSSPNRTLDLASALEIGSAGTKASTDQSGNSTCARSVMTIAFEFGIESHMQEH 648

Query: 735 LSLGSVATVNNLIACTVERIKASLS 759
           ++  +   V  +I+ +V+R+  +LS
Sbjct: 649 VASMARQYVRGIIS-SVQRVALALS 672


>gi|147810805|emb|CAN76162.1| hypothetical protein VITISV_016297 [Vitis vinifera]
          Length = 120

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/116 (49%), Positives = 77/116 (66%), Gaps = 6/116 (5%)

Query: 651 MLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIG 710
           ML+LQESC +P    V+YAP+DI A+NV + G +   + +LPSGF +  DG S  GA   
Sbjct: 1   MLMLQESCVEPLGGLVVYAPIDIPAINVAIRGEESGNIPILPSGFIVSGDGRSDSGAGCT 60

Query: 711 E----AASGGSLLTVAFQILV--DSVPTAKLSLGSVATVNNLIACTVERIKASLSC 760
                  SGGSLLTVAFQ+LV   + P  +L++ SVATVN LI+ TV++IK +L+C
Sbjct: 61  SDGNIMGSGGSLLTVAFQVLVCGPAAPQQQLNMESVATVNTLISSTVQKIKIALNC 116


>gi|108705780|gb|ABF93575.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
          Length = 626

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 125/540 (23%), Positives = 218/540 (40%), Gaps = 109/540 (20%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 27  KYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCRDKQ- 85

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E+ +L+A N +                TA+ ++  +E      N RL++
Sbjct: 86  ---------RKESSRLQAVNRKL---------------TAMNKLLMEE------NERLQK 115

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++    A ++ + + N PL                  A        +    + LR  
Sbjct: 116 QVSQLVHENA-HMRQQLQNTPL------------------ANDTSCESNVTTPQNPLRDA 156

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
           S P+      ++ +A   + E +  A            GTA    +   ++  P  +G  
Sbjct: 157 SNPSG-----LLSIAEETLTEFLSKAT-----------GTAIDWVQMPGMKPGPDSVGIV 200

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    +VEIL D   W             LEV +   AGN  
Sbjct: 201 AISHGCRGVAARACGLVNLEPTKVVEILKDRPSW-------FRDCRNLEVFTMIPAGN-G 252

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ LVP R+ + +RY     +G+  V + SL      P+       VR
Sbjct: 253 GTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQYVR 312

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG L++    G S V  V+H++++   V  + + L  +      K   A L R  
Sbjct: 313 AEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAAL-RHI 371

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            ++A   +        G +    GR+   +   ++R+   F   +S      W+ + G G
Sbjct: 372 RQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMGGDG 423

Query: 558 ADDVRVM---TRKSVDDP------GRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
            +DV +    T+K   +       G P GI+ + A+     VPP  +  FLR+   RSEW
Sbjct: 424 VEDVVIACNSTKKIRSNSNAGIAFGAPGGIICAKASMLLQSVPPAVLVRFLREH--RSEW 481


>gi|15218158|ref|NP_175627.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
 gi|75216693|sp|Q9ZU11.1|ATB15_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-15; AltName:
           Full=HD-ZIP protein ATHB-15; AltName: Full=Homeodomain
           transcription factor ATHB-15; AltName: Full=Protein
           CORONA; AltName: Full=Protein INCURVATA 4
 gi|4220462|gb|AAD12689.1| Strong similarity to gb|Z50851 HD-zip (athb-8) gene from
           Arabidopsis thaliana containing Homeobox PF|00046 and
           bZIP PF|00170 domains [Arabidopsis thaliana]
 gi|16974581|gb|AAL31186.1| At1g52150/F5F19_21 [Arabidopsis thaliana]
 gi|19578319|emb|CAD28400.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|332194639|gb|AEE32760.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
          Length = 836

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 166/745 (22%), Positives = 286/745 (38%), Gaps = 167/745 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A                                    N  L E
Sbjct: 75  -QRKEASRLQAVNRKLTA-----------------------------------MNKLLME 98

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           E DR+    ++ V +   +Y     P PS P +    +   +  +  G+       L S 
Sbjct: 99  ENDRLQKQVSQLVHEN--SYFRQHTPNPSLPAK----DTSCESVVTSGQHQ-----LASQ 147

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
           +   +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 148 NPQRDASPAGLLSIAEETLAEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGII 196

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EI+ D   W             +EV++     N  
Sbjct: 197 AISHGCTGVAARACGLVGLEPTRVAEIVKDRPSW-------FRECRAVEVMNVLPTAN-G 248

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  V + SL + +  P+       VR
Sbjct: 249 GTVELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVR 308

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
                SG LI+    G S +  V+H++++   V  + + L  +      K  +A L RQ 
Sbjct: 309 AEMLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAAL-RQL 367

Query: 500 ERLAS-VMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGT 556
           +++A  V  TN          N  GR+  ++  L++R+   F   V+  T   W+ + G 
Sbjct: 368 KQIAQEVTQTNSS-------VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVI-GD 419

Query: 557 GADDVRVMTRKSVDD---------PGRPP--GIVLSAATSFWLP-VPPKRVFDFLRDENT 604
             DDV +    S D           G  P   +VL A  S  L  VPP  +  FLR+   
Sbjct: 420 SMDDVTITVNSSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREH-- 477

Query: 605 RSEW---DILS------------------NGGVVQEMAHIANGRDTGNCVSLLRVNCLQS 643
           RSEW   +I +                   G V+  +AH     +    + L  +     
Sbjct: 478 RSEWADNNIDAYLAAAVKVGPCSARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPE 537

Query: 644 ANSSQSNMLILQ-----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL 698
                 ++ +LQ     +     T + +I+AP+D             D   LLPSGF I+
Sbjct: 538 DAIVPRDIFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRII 588

Query: 699 P------------------------DGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAK 734
           P                         GT       G +    S++T+AF+  ++S     
Sbjct: 589 PLDSAKEVSSPNRTLDLASALEIGSAGTKASTDQSGNSTCARSVMTIAFEFGIESHMQEH 648

Query: 735 LSLGSVATVNNLIACTVERIKASLS 759
           ++  +   V  +I+ +V+R+  +LS
Sbjct: 649 VASMARQYVRGIIS-SVQRVALALS 672


>gi|296086017|emb|CBI31458.3| unnamed protein product [Vitis vinifera]
          Length = 840

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 121/544 (22%), Positives = 211/544 (38%), Gaps = 116/544 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +E  Q+K WFQN+R + K +
Sbjct: 27  KYVRYTAEQVEALERVYAECPKPSSTRRQQLIRECPILSNIESKQIKVWFQNRRCREKQK 86

Query: 149 HE----RHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            E    +  N +L + N+ L  +N R ++ +S                      L  EN 
Sbjct: 87  KEAVQLQSVNKKLNSMNKLLMEENERLQKQVS---------------------QLVYENG 125

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL 264
            +++++  ++A         +V  P  S    + P+ L                      
Sbjct: 126 YMKQQLQNVTATTTDTRCDSLVATPQHSSRTGNNPIGL---------------------- 163

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRG 324
                          + +A  AM E +  A+           GTA    +   ++  P  
Sbjct: 164 ---------------LSIAEEAMGEFLSKAK-----------GTAVDWVQIPGMKPGPDS 197

Query: 325 IGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVA 382
           +G       C   A+R  ++V +    ++EIL D   W             LEV +   A
Sbjct: 198 VGTVAISHSCNGVAARACSLVSLEPTEIMEILKDRQSW-------FRDCRKLEVFAKFPA 250

Query: 383 GNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN--LRPSPA--- 437
           GN  G L+++  +   P+ L P R+ + +RY     +G+  V + S+      P+P+   
Sbjct: 251 GN-GGILELIYMQVYAPTTLAPARDFWTLRYTSSLEDGSLVVCERSMSGSGAGPNPSTAS 309

Query: 438 --VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATL 495
             VR +  PSG LI+    G S +  V+H++++   V  + + L  +      K  VA L
Sbjct: 310 QFVRAKMLPSGYLIRPCEGGGSIIHIVDHLDLEAWSVPEVLQPLYKSSKLVAQKMTVAAL 369

Query: 496 DRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVIS--FCAGVSASTAHTWTTL 553
                         I     G +T+  G++  +  A R  +S  F   ++      W+ +
Sbjct: 370 HH---------IRQIAQETSGDVTHTLGKQPAVLRAFRQKLSRGFNDAINGFNDDGWSLM 420

Query: 554 SGTGADD--VRVMTRKSVDDPGR-------PPGIVLSAATSFWLPVPPKRVFDFLRDENT 604
              GA+D  + V + K++            P GI+   A      V P  +  FLR+   
Sbjct: 421 QIDGAEDLIISVNSAKNLSTISNSTAALSLPGGILCVKAAMLLQNVSPSLMVRFLREH-- 478

Query: 605 RSEW 608
           RSEW
Sbjct: 479 RSEW 482


>gi|225449048|ref|XP_002274194.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Vitis
           vinifera]
          Length = 841

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 121/544 (22%), Positives = 211/544 (38%), Gaps = 116/544 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +E  Q+K WFQN+R + K +
Sbjct: 28  KYVRYTAEQVEALERVYAECPKPSSTRRQQLIRECPILSNIESKQIKVWFQNRRCREKQK 87

Query: 149 HE----RHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            E    +  N +L + N+ L  +N R ++ +S                      L  EN 
Sbjct: 88  KEAVQLQSVNKKLNSMNKLLMEENERLQKQVS---------------------QLVYENG 126

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL 264
            +++++  ++A         +V  P  S    + P+ L                      
Sbjct: 127 YMKQQLQNVTATTTDTRCDSLVATPQHSSRTGNNPIGL---------------------- 164

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRG 324
                          + +A  AM E +  A+           GTA    +   ++  P  
Sbjct: 165 ---------------LSIAEEAMGEFLSKAK-----------GTAVDWVQIPGMKPGPDS 198

Query: 325 IGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVA 382
           +G       C   A+R  ++V +    ++EIL D   W             LEV +   A
Sbjct: 199 VGTVAISHSCNGVAARACSLVSLEPTEIMEILKDRQSW-------FRDCRKLEVFAKFPA 251

Query: 383 GNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN--LRPSPA--- 437
           GN  G L+++  +   P+ L P R+ + +RY     +G+  V + S+      P+P+   
Sbjct: 252 GN-GGILELIYMQVYAPTTLAPARDFWTLRYTSSLEDGSLVVCERSMSGSGAGPNPSTAS 310

Query: 438 --VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATL 495
             VR +  PSG LI+    G S +  V+H++++   V  + + L  +      K  VA L
Sbjct: 311 QFVRAKMLPSGYLIRPCEGGGSIIHIVDHLDLEAWSVPEVLQPLYKSSKLVAQKMTVAAL 370

Query: 496 DRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVIS--FCAGVSASTAHTWTTL 553
                         I     G +T+  G++  +  A R  +S  F   ++      W+ +
Sbjct: 371 HH---------IRQIAQETSGDVTHTLGKQPAVLRAFRQKLSRGFNDAINGFNDDGWSLM 421

Query: 554 SGTGADD--VRVMTRKSVDDPGR-------PPGIVLSAATSFWLPVPPKRVFDFLRDENT 604
              GA+D  + V + K++            P GI+   A      V P  +  FLR+   
Sbjct: 422 QIDGAEDLIISVNSAKNLSTISNSTAALSLPGGILCVKAAMLLQNVSPSLMVRFLREH-- 479

Query: 605 RSEW 608
           RSEW
Sbjct: 480 RSEW 483


>gi|359483944|ref|XP_003633041.1| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 3
           [Vitis vinifera]
          Length = 862

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 125/552 (22%), Positives = 209/552 (37%), Gaps = 120/552 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTPEQVEALERVYSECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEK-------LRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRL 201
            +R E ++L+T N K       L  +N R ++ +S                      L  
Sbjct: 75  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS---------------------QLVY 112

Query: 202 ENARLREEIDRISAIAAKYVGKPVV---NYPLLSPPVPSRPLELAVGNFGAQPGIGGGEM 258
           EN  +R+++   S        + VV    +     P P  P   A    G          
Sbjct: 113 ENGYMRQQLQSASTATTDTSCESVVMSGQHQQQQNPTPQHPQRDASNPAG---------- 162

Query: 259 YGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYV 318
                 L +I+  T A+                         +++   GTA    +   +
Sbjct: 163 ------LLAIAEETLAE-------------------------FLSKATGTAVDWVQMIGM 191

Query: 319 RTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEV 376
           +  P  IG       C   A+R   +V +    + EIL D   W             L+V
Sbjct: 192 KPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSW-------FRDCRCLDV 244

Query: 377 LSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP 436
           LS    GN  G ++++  +   P+ L   R+ + +RY     +G+  + + SL +    P
Sbjct: 245 LSVIPTGN-GGTIELIYMQTYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTSSTGGP 303

Query: 437 A-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAK 489
                   +R    PSG LI+    G S +  V+HV++D   V  + + L  +      K
Sbjct: 304 TGPPASSYIRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQK 363

Query: 490 RWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTA 547
             VA L R   ++A   +  I  G         GR+   +   ++R+   F   V+    
Sbjct: 364 TTVAAL-RHIRQIAQETSGEIQYG--------GGRQPAVLRTFSQRLCRGFNDAVNGFAD 414

Query: 548 HTWTTLSGTGADDVRVMTRKSVDD-----------PGRPPGIVLSAATSFWLPVPPKRVF 596
             W+ +   G +DV ++   S              P    G++ + A+     VPP  + 
Sbjct: 415 DGWSLMGSDGVEDVTIVINSSPSKFLGPQYNSTMFPTFGGGVLCAKASMLLQNVPPALLV 474

Query: 597 DFLRDENTRSEW 608
            FLR+   RSEW
Sbjct: 475 RFLREH--RSEW 484


>gi|125542090|gb|EAY88229.1| hypothetical protein OsI_09681 [Oryza sativa Indica Group]
          Length = 857

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 126/540 (23%), Positives = 218/540 (40%), Gaps = 109/540 (20%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 27  KYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCRDKQ- 85

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E+ +L+A N +                TA+ ++      L  EN RL++
Sbjct: 86  ---------RKESSRLQAVNRKL---------------TAMNKL------LMEENERLQK 115

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++    A ++ + + N PL                  A        +    + LR  
Sbjct: 116 QVSQLVHENA-HMRQQLQNTPL------------------ANDTSCESNVTTPQNPLRDA 156

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
           S P+      ++ +A   + E +  A            GTA    +   ++  P  +G  
Sbjct: 157 SNPSG-----LLSIAEETLTEFLSKAT-----------GTAIDWVQMPGMKPGPDSVGIV 200

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    +VEIL D   W             LEV +   AGN  
Sbjct: 201 AISHGCRGVAARACGLVNLEPTKVVEILKDRPSW-------FRDCRNLEVFTMIPAGN-G 252

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ LVP R+ + +RY     +G+  V + SL      P+       VR
Sbjct: 253 GTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQYVR 312

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG L++    G S V  V+H++++   V  + + L  +      K   A L R  
Sbjct: 313 AEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAAL-RHI 371

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            ++A   +        G +    GR+   +   ++R+   F   +S      W+ + G G
Sbjct: 372 RQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMGGDG 423

Query: 558 ADDVRVM---TRKSVDDP------GRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
            +DV +    T+K   +       G P GI+ + A+     VPP  +  FLR+   RSEW
Sbjct: 424 VEDVVIACNSTKKIRSNSNAGIAFGAPGGIICAKASMLLQSVPPAVLVRFLREH--RSEW 481


>gi|359483940|ref|XP_002281868.2| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 1
           [Vitis vinifera]
 gi|147820218|emb|CAN73584.1| hypothetical protein VITISV_033098 [Vitis vinifera]
 gi|297740817|emb|CBI30999.3| unnamed protein product [Vitis vinifera]
          Length = 845

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 166/758 (21%), Positives = 286/758 (37%), Gaps = 186/758 (24%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTPEQVEALERVYSECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEK-------LRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRL 201
            +R E ++L+T N K       L  +N R ++ +S                      L  
Sbjct: 75  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS---------------------QLVY 112

Query: 202 ENARLREEIDRISAIAAKYVGKPVV---NYPLLSPPVPSRPLELAVGNFGAQPGIGGGEM 258
           EN  +R+++   S        + VV    +     P P  P   A    G          
Sbjct: 113 ENGYMRQQLQSASTATTDTSCESVVMSGQHQQQQNPTPQHPQRDASNPAG---------- 162

Query: 259 YGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYV 318
                 L +I+  T A+                         +++   GTA    +   +
Sbjct: 163 ------LLAIAEETLAE-------------------------FLSKATGTAVDWVQMIGM 191

Query: 319 RTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEV 376
           +  P  IG       C   A+R   +V +    + EIL D   W             L+V
Sbjct: 192 KPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSW-------FRDCRCLDV 244

Query: 377 LSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP 436
           LS    GN  G ++++  +   P+ L   R+ + +RY     +G+  + + SL +    P
Sbjct: 245 LSVIPTGN-GGTIELIYMQTYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTSSTGGP 303

Query: 437 A-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAK 489
                   +R    PSG LI+    G S +  V+HV++D   V  + + L  +      K
Sbjct: 304 TGPPASSYIRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQK 363

Query: 490 RWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTA 547
             VA L R   ++A   +  I  G         GR+   +   ++R+   F   V+    
Sbjct: 364 TTVAAL-RHIRQIAQETSGEIQYG--------GGRQPAVLRTFSQRLCRGFNDAVNGFAD 414

Query: 548 HTWTTLSGTGADDVRVMTRKSVDD-----------PGRPPGIVLSAATSFWLPVPPKRVF 596
             W+ +   G +DV ++   S              P    G++ + A+     VPP  + 
Sbjct: 415 DGWSLMGSDGVEDVTIVINSSPSKFLGPQYNSTMFPTFGGGVLCAKASMLLQNVPPALLV 474

Query: 597 DFLRDENTRSEW-----DILSN---------------GG-----VVQEMAHIANGRDTGN 631
            FLR+   RSEW     D  S                GG     V+  +AH     +   
Sbjct: 475 RFLREH--RSEWADYGVDAYSAACLKASPYEVPCARPGGFPSSQVILPLAHTVEHEEFLE 532

Query: 632 CVSLLRVNCLQSANSSQSNMLILQESCT--DPTA----SFVIYAPVDIVAMNVVLNGGDP 685
            V  L  +     + + +  + L + C+  D  A    + +++AP+D             
Sbjct: 533 VVR-LEGHAFSPEDVALTRDMYLLQLCSGVDENAAGACAQLVFAPID---------ESFA 582

Query: 686 DYVALLPSGFAILP-----DG----TSLHGANIGEAASGG---------------SLLTV 721
           D   LLPSGF ++P     DG     +L  A+  E  +GG               S+LT+
Sbjct: 583 DDAPLLPSGFRVIPLDPKTDGPAATRTLDLASTLEVGAGGARPANESDLNNYNLRSVLTI 642

Query: 722 AFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           AFQ   ++     ++  +   V +++A +V+R+  +++
Sbjct: 643 AFQFTFENHVRDNVAAMARQYVRSVMA-SVQRVAMAIA 679


>gi|89514847|gb|ABD75298.1| class III homeodomain-leucine zipper protein C3HDZ2 [Physcomitrella
           patens]
          Length = 876

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 176/738 (23%), Positives = 288/738 (39%), Gaps = 158/738 (21%)

Query: 84  QEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQVKFWFQ 139
           +EQ  +   +Y R+T  Q++ +E  + ECP P   +R +L +E      +EP Q+K WFQ
Sbjct: 5   KEQTMDSSGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQ 64

Query: 140 NKRTQMKTQHERHENTQLRTENEKLRADN---MRYREALSNASCPNCGGPTAIGEMSFDE 196
           N+R + K   +R E T+L + N KL A N   M   E L+  +                 
Sbjct: 65  NRRCREK---QRKEATRLVSVNAKLTALNKLLMEENERLAKHAS---------------- 105

Query: 197 HHLRLENARLREEIDRISAIAAKYVGKPVVN--YPLLSPPVPSRPLELAVGNFGAQPGIG 254
             L LEN  LR+++  +          P+ N  + L S  +  +  E AV N G +    
Sbjct: 106 -QLTLENHSLRQQLPSL----------PLTNGTHRLSSQNLLKK--ERAV-NGGDESSTQ 151

Query: 255 GG---EMYGAADLLRSISAPTEADKPMIIELA----------VAAMEELIRMAQMGEPLW 301
           GG   +++G A +    S  T  D  +   L             +   L+  A+     +
Sbjct: 152 GGICVKLHGQAGV---ASTDTSCDSAVTGGLPHHLTPRHSPRYTSPAGLLATAEETLTEF 208

Query: 302 MTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQ 359
           +    GTA    +   ++  P  IG       C   A+R   +V ++   + E+L D   
Sbjct: 209 LAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACGLVALDAGKVTEVLKDRPA 268

Query: 360 WSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGE 419
           W       +     +EVL     GN  G ++++  +    + L P R+   +RY     +
Sbjct: 269 W-------LEDCRRMEVLGALPTGN-RGTIELLYTQMYASTTLAPARDYCTLRYTTILED 320

Query: 420 GTWAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV 472
           G   + + SL   +  P+       VR    PSG LI+    G   +  V+H +     V
Sbjct: 321 GNLVICERSLTGGQNGPSMPPVQSFVRGEMFPSGYLIRPCDGGGCIIHVVDHYDNGPWSV 380

Query: 473 HNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAE 532
             + + L  +      +  +A L R   RLA+       +GE G   N      +  L +
Sbjct: 381 PEVLRPLYESPAVLAQRSTIAAL-RHLRRLAAE-----ESGE-GNPRNGQHPAVLRTLGQ 433

Query: 533 RMVISFCAGVSASTAHTWTTLSGTGADDVRVM---TRKSVDDP--------GRPPGIVLS 581
           R+   F   V+      W +    G DDV V+   T +S++              GI+ +
Sbjct: 434 RLAKGFKNAVNGFADDGWVSTVSDGLDDVSVILNATSQSMEGQIASDKLLYSLGGGILCA 493

Query: 582 AATSFWLPVPPKRVFDFLRDENTRSEW---DILSN----------------GGV--VQEM 620
            A+     VPP  +  FLR+   RSEW   D+ +N                GGV  VQ  
Sbjct: 494 KASMLLQNVPPSILIKFLREH--RSEWADYDMDANLATSFRSNGNGYAPQGGGVSHVQLP 551

Query: 621 AHIANGRDTGNCVSLLRV---NCLQSANSSQSNMLILQESCTDPTA----SFVIYAPVDI 673
             + N  + G  + ++++   + +Q    S+ + L+   S  D  A    + +I+APVD+
Sbjct: 552 LPLPNSGEHGEILEVVKLEDHSSVQHMVISRDSFLLQLCSGIDENAVGASAQLIFAPVDV 611

Query: 674 VAMNVVLNGGDPDYVALLPSGFAILP-DGTSL------HGANIGEAASGG---------- 716
                       + + LLPSGF I P D   L      H  ++     GG          
Sbjct: 612 ALT---------EDIPLLPSGFCISPVDANVLDEFDLDHTLDLASTLEGGSDLRLNGDSK 662

Query: 717 ---------SLLTVAFQI 725
                    S+LT+AFQ 
Sbjct: 663 SNGTSSHMRSVLTIAFQF 680


>gi|30695149|ref|NP_849795.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
 gi|332194640|gb|AEE32761.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
          Length = 837

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 166/746 (22%), Positives = 286/746 (38%), Gaps = 168/746 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A                                    N  L E
Sbjct: 75  -QRKEASRLQAVNRKLTA-----------------------------------MNKLLME 98

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           E DR+    ++ V +   +Y     P PS P +    +   +  +  G+       L S 
Sbjct: 99  ENDRLQKQVSQLVHEN--SYFRQHTPNPSLPAK----DTSCESVVTSGQHQ-----LASQ 147

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
           +   +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 148 NPQRDASPAGLLSIAEETLAEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGII 196

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EI+ D   W             +EV++     N  
Sbjct: 197 AISHGCTGVAARACGLVGLEPTRVAEIVKDRPSW-------FRECRAVEVMNVLPTAN-G 248

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  V + SL + +  P+       VR
Sbjct: 249 GTVELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVR 308

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
                SG LI+    G S +  V+H++++   V  + + L  +      K  +A L RQ 
Sbjct: 309 AEMLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAAL-RQL 367

Query: 500 ERLAS-VMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGT 556
           +++A  V  TN          N  GR+  ++  L++R+   F   V+  T   W+ + G 
Sbjct: 368 KQIAQEVTQTNSS-------VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVI-GD 419

Query: 557 GADDVRVMTRKSVDD---------PGRPP--GIVLSAATSFWLP-VPPKRVFDFLRDENT 604
             DDV +    S D           G  P   +VL A  S  L  VPP  +  FLR+   
Sbjct: 420 SMDDVTITVNSSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREH-- 477

Query: 605 RSEW---DILS------------------NGGVVQEMAHIANGRDTGNCVSLLRVNCLQS 643
           RSEW   +I +                   G V+  +AH     +    + L  +     
Sbjct: 478 RSEWADNNIDAYLAAAVKVGPCSARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPE 537

Query: 644 ANSSQSNMLILQ-----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL 698
                 ++ +LQ     +     T + +I+AP+D             D   LLPSGF I+
Sbjct: 538 DAIVPRDIFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRII 588

Query: 699 P-------------------------DGTSLHGANIGEAASGGSLLTVAFQILVDSVPTA 733
           P                          GT       G +    S++T+AF+  ++S    
Sbjct: 589 PLDSAKQEVSSPNRTLDLASALEIGSAGTKASTDQSGNSTCARSVMTIAFEFGIESHMQE 648

Query: 734 KLSLGSVATVNNLIACTVERIKASLS 759
            ++  +   V  +I+ +V+R+  +LS
Sbjct: 649 HVASMARQYVRGIIS-SVQRVALALS 673


>gi|413957205|gb|AFW89854.1| rolled leaf1 [Zea mays]
          Length = 709

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 163/729 (22%), Positives = 271/729 (37%), Gaps = 194/729 (26%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 30  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQNRRCRDKQ- 88

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEH--------HLR 200
                    R E+ +L+A N +                TA+ ++  +E+         L 
Sbjct: 89  ---------RKESSRLQAVNRKL---------------TAMNKLLMEENERLQKQVSQLV 124

Query: 201 LENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYG 260
            ENA +R+++   S          V      +PP P                        
Sbjct: 125 HENAHMRQQLQNTSLANDTSCESNVT-----TPPNP------------------------ 155

Query: 261 AADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRT 320
               +R  S P+                 L+ +A+     +++   GTA    +   ++ 
Sbjct: 156 ----IRDASNPSG----------------LLAIAEETFTEFLSKATGTAIDWVQMPGMKP 195

Query: 321 FPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLS 378
            P  +G       C   A+R   +V +     +EIL D   W            +LEV +
Sbjct: 196 GPDSVGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSW-------FRDCRSLEVFT 248

Query: 379 TGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP-- 436
              AGN  G ++++  +   P+ LVP R+ + +RY     +G+  V + SL      P  
Sbjct: 249 RFPAGN-GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNA 307

Query: 437 -----AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRW 491
                 VR    PSG L++    G S V  V+H++++   V  + + L  +      K  
Sbjct: 308 ASTQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMT 367

Query: 492 VATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHT 549
              L R   ++A   +        G +    GR+   +   ++R+   F   +S      
Sbjct: 368 TVAL-RHLRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDG 418

Query: 550 WTTLSGTGADDVRVM---TRKSVDDP------GRPPGIVLSAATSFWLPVPPKRVFDFLR 600
           W+ + G G +DV +    T+K  +        G P GI+ + A+     VPP  +  FLR
Sbjct: 419 WSVMGGDGIEDVVIACNSTKKIRNTSNAGITFGAPGGIICAKASMLLQSVPPAVLVRFLR 478

Query: 601 DENTRSEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVSL 635
           +   RSEW                            S G ++  +AH     +    V L
Sbjct: 479 EH--RSEWADYNIDAYLASSLKTSACSLPGLRPMRFSEGQMIMPLAHTVENEEILEVVRL 536

Query: 636 LRVNCLQSANSSQSNMLILQESCT-----DPTASF-VIYAPVDIVAMNVVLNGGDPDYVA 689
                L    +  S  + L + CT        +SF +++AP+D            PD   
Sbjct: 537 -EGQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID---------EHFPDDAP 586

Query: 690 LLPSGFAILP-----DGTS-------LHGANIGEAA-----------SGGSLLTVAFQI- 725
           L+ SGF ++P     DG S           ++G AA           S  S+LT+AFQ  
Sbjct: 587 LISSGFRVIPLDVKTDGVSSGRTLDLASSLDVGSAAPQASGESPDDCSLRSVLTIAFQFP 646

Query: 726 ----LVDSV 730
               L DSV
Sbjct: 647 YEMHLQDSV 655


>gi|24431605|gb|AAN61485.1| Putative homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|125584645|gb|EAZ25309.1| hypothetical protein OsJ_09120 [Oryza sativa Japonica Group]
          Length = 857

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 126/540 (23%), Positives = 218/540 (40%), Gaps = 109/540 (20%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 27  KYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCRDKQ- 85

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E+ +L+A N +                TA+ ++      L  EN RL++
Sbjct: 86  ---------RKESSRLQAVNRKL---------------TAMNKL------LMEENERLQK 115

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++    A ++ + + N PL                  A        +    + LR  
Sbjct: 116 QVSQLVHENA-HMRQQLQNTPL------------------ANDTSCESNVTTPQNPLRDA 156

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
           S P+      ++ +A   + E +  A            GTA    +   ++  P  +G  
Sbjct: 157 SNPSG-----LLSIAEETLTEFLSKAT-----------GTAIDWVQMPGMKPGPDSVGIV 200

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    +VEIL D   W             LEV +   AGN  
Sbjct: 201 AISHGCRGVAARACGLVNLEPTKVVEILKDRPSW-------FRDCRNLEVFTMIPAGN-G 252

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ LVP R+ + +RY     +G+  V + SL      P+       VR
Sbjct: 253 GTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQYVR 312

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG L++    G S V  V+H++++   V  + + L  +      K   A L R  
Sbjct: 313 AEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAAL-RHI 371

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            ++A   +        G +    GR+   +   ++R+   F   +S      W+ + G G
Sbjct: 372 RQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMGGDG 423

Query: 558 ADDVRVM---TRKSVDDP------GRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
            +DV +    T+K   +       G P GI+ + A+     VPP  +  FLR+   RSEW
Sbjct: 424 VEDVVIACNSTKKIRSNSNAGIAFGAPGGIICAKASMLLQSVPPAVLVRFLREH--RSEW 481


>gi|110349526|gb|ABG73238.1| class III HD-Zip protein HB13 [Physcomitrella patens]
          Length = 877

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 176/738 (23%), Positives = 288/738 (39%), Gaps = 158/738 (21%)

Query: 84  QEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQVKFWFQ 139
           +EQ  +   +Y R+T  Q++ +E  + ECP P   +R +L +E      +EP Q+K WFQ
Sbjct: 6   KEQTMDSSGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQ 65

Query: 140 NKRTQMKTQHERHENTQLRTENEKLRADN---MRYREALSNASCPNCGGPTAIGEMSFDE 196
           N+R + K   +R E T+L + N KL A N   M   E L+  +                 
Sbjct: 66  NRRCREK---QRKEATRLVSVNAKLTALNKLLMEENERLAKHAS---------------- 106

Query: 197 HHLRLENARLREEIDRISAIAAKYVGKPVVN--YPLLSPPVPSRPLELAVGNFGAQPGIG 254
             L LEN  LR+++  +          P+ N  + L S  +  +  E AV N G +    
Sbjct: 107 -QLTLENHSLRQQLPSL----------PLTNGTHRLSSQNLLKK--ERAV-NGGDESSTQ 152

Query: 255 GG---EMYGAADLLRSISAPTEADKPMIIELA----------VAAMEELIRMAQMGEPLW 301
           GG   +++G A +    S  T  D  +   L             +   L+  A+     +
Sbjct: 153 GGICVKLHGQAGV---ASTDTSCDSAVTGGLPHHLTPRHSPRYTSPAGLLATAEETLTEF 209

Query: 302 MTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQ 359
           +    GTA    +   ++  P  IG       C   A+R   +V ++   + E+L D   
Sbjct: 210 LAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACGLVALDAGKVTEVLKDRPA 269

Query: 360 WSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGE 419
           W       +     +EVL     GN  G ++++  +    + L P R+   +RY     +
Sbjct: 270 W-------LEDCRRMEVLGALPTGN-RGTIELLYTQMYASTTLAPARDYCTLRYTTILED 321

Query: 420 GTWAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV 472
           G   + + SL   +  P+       VR    PSG LI+    G   +  V+H +     V
Sbjct: 322 GNLVICERSLTGGQNGPSMPPVQSFVRGEMFPSGYLIRPCDGGGCIIHVVDHYDNGPWSV 381

Query: 473 HNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAE 532
             + + L  +      +  +A L R   RLA+       +GE G   N      +  L +
Sbjct: 382 PEVLRPLYESPAVLAQRSTIAAL-RHLRRLAAE-----ESGE-GNPRNGQHPAVLRTLGQ 434

Query: 533 RMVISFCAGVSASTAHTWTTLSGTGADDVRVM---TRKSVDDP--------GRPPGIVLS 581
           R+   F   V+      W +    G DDV V+   T +S++              GI+ +
Sbjct: 435 RLAKGFKNAVNGFADDGWVSTVSDGLDDVSVILNATSQSMEGQIASDKLLYSLGGGILCA 494

Query: 582 AATSFWLPVPPKRVFDFLRDENTRSEW---DILSN----------------GGV--VQEM 620
            A+     VPP  +  FLR+   RSEW   D+ +N                GGV  VQ  
Sbjct: 495 KASMLLQNVPPSILIKFLREH--RSEWADYDMDANLATSFRSNGNGYAPQGGGVSHVQLP 552

Query: 621 AHIANGRDTGNCVSLLRV---NCLQSANSSQSNMLILQESCTDPTA----SFVIYAPVDI 673
             + N  + G  + ++++   + +Q    S+ + L+   S  D  A    + +I+APVD+
Sbjct: 553 LPLPNSGEHGEILEVVKLEDHSSVQHMVISRDSFLLQLCSGIDENAVGASAQLIFAPVDV 612

Query: 674 VAMNVVLNGGDPDYVALLPSGFAILP-DGTSL------HGANIGEAASGG---------- 716
                       + + LLPSGF I P D   L      H  ++     GG          
Sbjct: 613 ALT---------EDIPLLPSGFCISPVDANVLDEFDLDHTLDLASTLEGGSDLRLNGDSK 663

Query: 717 ---------SLLTVAFQI 725
                    S+LT+AFQ 
Sbjct: 664 SNGTSSHMRSVLTIAFQF 681


>gi|356577827|ref|XP_003557023.1| PREDICTED: uncharacterized protein LOC100813101, partial [Glycine
           max]
          Length = 416

 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/142 (45%), Positives = 75/142 (52%), Gaps = 20/142 (14%)

Query: 466 EVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK 525
           EV    +  LY  LV+ G        +  L   C  L    A  +P G + V   +D  K
Sbjct: 295 EVVKGAIFMLYALLVAFG-------LIKALPLTCIFLC---ALTLPMGNLVVRFVEDNYK 344

Query: 526 SMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATS 585
              K+   M   FC  + A        L G       V+ RKSVDDPGRPPGIVLSAATS
Sbjct: 345 DKNKIF--MAKYFCVRLHA--------LFGVTLALGLVLARKSVDDPGRPPGIVLSAATS 394

Query: 586 FWLPVPPKRVFDFLRDENTRSE 607
           FWLPVPPKRVFDFLRDEN+R+E
Sbjct: 395 FWLPVPPKRVFDFLRDENSRNE 416


>gi|255550932|ref|XP_002516514.1| DNA binding protein, putative [Ricinus communis]
 gi|223544334|gb|EEF45855.1| DNA binding protein, putative [Ricinus communis]
          Length = 782

 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 158/725 (21%), Positives = 269/725 (37%), Gaps = 163/725 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 22  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 79

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A N    E                            EN RL++
Sbjct: 80  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 110

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y  +   N         +  L     N   +  +  G+ +     L   
Sbjct: 111 QVSQL-VYENSYFRQQTQN---------ATNLATTDTNTSCESVVTSGQHH-----LTPQ 155

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 156 HPPRDASPAGLLSIAEETLAEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGIV 204

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W             ++VL+    GN  
Sbjct: 205 AISHGCPGVAARACGLVGLEPTRVAEILKDRPSW-------FRDCRAVDVLNALSTGN-G 256

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  + + SL+N +  P+       VR
Sbjct: 257 GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLNNTQNGPSMPPTQHFVR 316

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+HV+++         Q VS  N  G  R  A L    
Sbjct: 317 AEMLPSGYLIRPCEGGGSIIHIVDHVDLEALRHLRQISQEVSQPNVSGWGRRPAALRALS 376

Query: 500 ERLASVM--ATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
           +RL+     A N  T E GV+    G K M      + IS+ +G                
Sbjct: 377 QRLSKGFNEAINGFTDE-GVV--HAGNKMM-----GLNISYASGF--------------- 413

Query: 558 ADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILS----- 612
                         P    G++ + A+     VPP  +  FLR+   RSEW         
Sbjct: 414 --------------PAMSNGVLCAKASMLLQNVPPAILLRFLREH--RSEWADTGIDAYA 457

Query: 613 -------------------NGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLI 653
                               G V+  +AH     +    + L  +   +         L+
Sbjct: 458 AAAVKAGPCTLPVARAGNFGGQVILPLAHTIEHEEFMEVIKLENMGYREDMIMPGDIFLL 517

Query: 654 LQESCTDP----TASFVIYAPVD---------------IVAMNVVLNGGDPDYVALLPSG 694
              S  D     T + +++AP+D               I+ ++  ++   P+    L S 
Sbjct: 518 QLCSGVDENAVGTCAELVFAPIDASFSDDAPIIPSGFRIIPLDSKMDVTSPNRTLDLASA 577

Query: 695 FAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERI 754
             + P G    G   G   S  S++T+AFQ   +      ++  +   V ++IA +V+R+
Sbjct: 578 LEVGPAGNKASGDLPGHCGSTKSVMTIAFQFAFEIHLQENVASMARQYVRSVIA-SVQRV 636

Query: 755 KASLS 759
             +LS
Sbjct: 637 ALALS 641


>gi|168023519|ref|XP_001764285.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684437|gb|EDQ70839.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 173/727 (23%), Positives = 280/727 (38%), Gaps = 151/727 (20%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R +L +E      +EP Q+K WFQN+R + K  
Sbjct: 6   KYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK-- 63

Query: 149 HERHENTQLRTENEKLRADN---MRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENAR 205
            +R E T+L + N KL A N   M   E L+  +                   L LEN  
Sbjct: 64  -QRKEATRLVSVNAKLTALNKLLMEENERLAKHAS-----------------QLTLENHS 105

Query: 206 LREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGG---EMYGAA 262
           LR+++  +      +     V   LL         E AV N G +    GG   +++G A
Sbjct: 106 LRQQLPSLPLTNGTHRLSSQVLQNLLKK-------ERAV-NGGDESSTQGGICVKLHGQA 157

Query: 263 DLLRSISAPTEADKPMIIELA----------VAAMEELIRMAQMGEPLWMTSLDGTAAVL 312
            +    S  T  D  +   L             +   L+  A+     ++    GTA   
Sbjct: 158 GV---ASTDTSCDSAVTGGLPHHLTPRHSPRYTSPAGLLATAEETLTEFLAKATGTAVDW 214

Query: 313 NEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSR 370
            +   ++  P  IG       C   A+R   +V ++   + E+L D   W       +  
Sbjct: 215 IQLPGMKPGPDAIGIIAISHGCVGIAARACGLVALDAGKVTEVLKDRPAW-------LED 267

Query: 371 AMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLD 430
              +EVL     GN  G ++++  +    + L P R+   +RY     +G   + + SL 
Sbjct: 268 CRRMEVLGALPTGN-RGTIELLYTQMYASTTLAPARDYCTLRYTTILEDGNLVICERSLT 326

Query: 431 NLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTG 483
             +  P+       VR    PSG LI+    G   +  V+H +     V  + + L  + 
Sbjct: 327 GGQNGPSMPPVQSFVRGEMFPSGYLIRPCDGGGCIIHVVDHYDNGPWSVPEVLRPLYESP 386

Query: 484 NAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVS 543
                +  +A L R   RLA+       +GE G   N      +  L +R+   F   V+
Sbjct: 387 AVLAQRSTIAAL-RHLRRLAAE-----ESGE-GNPRNGQHPAVLRTLGQRLAKGFKNAVN 439

Query: 544 ASTAHTWTTLSGTGADDVRVM---TRKSVDDP--------GRPPGIVLSAATSFWLPVPP 592
                 W +    G DDV V+   T +S++              GI+ + A+     VPP
Sbjct: 440 GFADDGWVSTVSDGLDDVSVILNATSQSMEGQIASDKLLYSLGGGILCAKASMLLQNVPP 499

Query: 593 KRVFDFLRDENTRSEW---DILSN----------------GGV--VQEMAHIANGRDTGN 631
             +  FLR+   RSEW   D+ +N                GGV  VQ    + N  + G 
Sbjct: 500 SILIKFLREH--RSEWADYDMDANLATSFRSNGNGYAPQGGGVSHVQLPLPLPNSGEHGE 557

Query: 632 CVSLLRV---NCLQSANSSQSNMLILQESCTDPTA----SFVIYAPVDIVAMNVVLNGGD 684
            + ++++   + +Q    S+ + L+   S  D  A    + +I+APVD+           
Sbjct: 558 ILEVVKLEDHSSVQHMVISRDSFLLQLCSGIDENAVGASAQLIFAPVDVALT-------- 609

Query: 685 PDYVALLPSGFAILP-DGTSL------HGANIGEAASGG-------------------SL 718
            + + LLPSGF I P D   L      H  ++     GG                   S+
Sbjct: 610 -EDIPLLPSGFCISPVDANVLDEFDLDHTLDLASTLEGGSDLRLNGDSKSNGTSSHMRSV 668

Query: 719 LTVAFQI 725
           LT+AFQ 
Sbjct: 669 LTIAFQF 675


>gi|356542621|ref|XP_003539765.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like isoform 2
           [Glycine max]
          Length = 844

 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 170/755 (22%), Positives = 290/755 (38%), Gaps = 192/755 (25%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WF         Q
Sbjct: 25  KYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWF---------Q 75

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEH--------HLR 200
           + R    Q R E  +L+  N +                TA+ ++  +E+         L 
Sbjct: 76  NRRCREKQ-RKEASRLQTVNRKL---------------TAMNKLLMEENDRLQKQVSQLV 119

Query: 201 LENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYG 260
            EN  +R+++   SA         VV  P                               
Sbjct: 120 CENGFMRQQLHTPSAATTDASCDSVVTTP------------------------------- 148

Query: 261 AADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRT 320
               +R  + P       ++ +A   + E +  A            GTA    +   ++ 
Sbjct: 149 -QHTMRDANNPAG-----LLSIAEETLTEFLSKAT-----------GTAVDWVQMPGMKP 191

Query: 321 FPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLS 378
            P  +G       C   A+R   +V +    + EIL D   W            +LEV +
Sbjct: 192 GPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFT 244

Query: 379 TGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN--LRPSP 436
              AGN  G ++++  +   P+ L P R+ + +RY      G+  V + SL      P+P
Sbjct: 245 MFPAGN-GGTIELVYTQTYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGSGTGPNP 303

Query: 437 A-----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRW 491
           A     VR    PSG LI+    G S +  V+H+ ++   V  + + L  +      K  
Sbjct: 304 AAAAQFVRAETLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMT 363

Query: 492 VATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHT 549
           +A L R   ++A   +  +  G         GR+   +   ++R+   F   V+      
Sbjct: 364 IAAL-RYIRQIAQETSGEVVYGL--------GRQPAVLRTFSQRLSRGFNDAVNGFNDDG 414

Query: 550 WTTLSGTGADDV--RVMTRKSVDDPGRPP-------GIVLSAATSFWLPVPPKRVFDFLR 600
           WT L+  GA+DV   V + K++     P        GI+ + A+     VPP  +  FLR
Sbjct: 415 WTVLNCDGAEDVFIAVNSTKNLSGTSNPASSLTFLGGILCAKASMLLQNVPPAVLVRFLR 474

Query: 601 DENTRSEWDILS----NGGVVQEMAHIANG----RDTGNCV-----------SLLRVNCL 641
           +   RSEW   S    +   ++   +   G    R TG+ +            +L V  L
Sbjct: 475 EH--RSEWADFSVDAYSAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRL 532

Query: 642 QSANSSQSNMLI-----LQESCT--DPTA----SFVIYAPVDIVAMNVVLNGGDPDYVAL 690
           +  + +Q +  +     L + C+  D  A    S +++AP+D +          PD   L
Sbjct: 533 EGHSLAQEDAFVSRDIHLLQICSGIDENAVGACSELVFAPIDEMF---------PDDAPL 583

Query: 691 LPSGFAILP----------------DGTSLHGANIGEAASGG----------SLLTVAFQ 724
           +PSGF I+P                D TS  G  +G A + G          S+LT+AFQ
Sbjct: 584 IPSGFRIIPLDSKPVKFCSSVNRTLDLTS--GFEVGPATTAGTDASSSQNTRSVLTIAFQ 641

Query: 725 ILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
              DS     +++ +   V ++I+ +V+R+  ++S
Sbjct: 642 FPFDSSLQDNVAVMARQYVRSVIS-SVQRVAMAIS 675


>gi|356542619|ref|XP_003539764.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like isoform 1
           [Glycine max]
          Length = 845

 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 170/756 (22%), Positives = 290/756 (38%), Gaps = 193/756 (25%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WF         Q
Sbjct: 25  KYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWF---------Q 75

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEH--------HLR 200
           + R    Q R E  +L+  N +                TA+ ++  +E+         L 
Sbjct: 76  NRRCREKQ-RKEASRLQTVNRKL---------------TAMNKLLMEENDRLQKQVSQLV 119

Query: 201 LENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYG 260
            EN  +R+++   SA         VV  P                               
Sbjct: 120 CENGFMRQQLHTPSAATTDASCDSVVTTP------------------------------- 148

Query: 261 AADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRT 320
               +R  + P       ++ +A   + E +  A            GTA    +   ++ 
Sbjct: 149 -QHTMRDANNPAG-----LLSIAEETLTEFLSKAT-----------GTAVDWVQMPGMKP 191

Query: 321 FPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLS 378
            P  +G       C   A+R   +V +    + EIL D   W            +LEV +
Sbjct: 192 GPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFT 244

Query: 379 TGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN--LRPSP 436
              AGN  G ++++  +   P+ L P R+ + +RY      G+  V + SL      P+P
Sbjct: 245 MFPAGN-GGTIELVYTQTYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGSGTGPNP 303

Query: 437 A-----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRW 491
           A     VR    PSG LI+    G S +  V+H+ ++   V  + + L  +      K  
Sbjct: 304 AAAAQFVRAETLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMT 363

Query: 492 VATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHT 549
           +A L R   ++A   +  +  G         GR+   +   ++R+   F   V+      
Sbjct: 364 IAAL-RYIRQIAQETSGEVVYGL--------GRQPAVLRTFSQRLSRGFNDAVNGFNDDG 414

Query: 550 WTTLSGTGADDV--RVMTRKSVDDPGRPP-------GIVLSAATSFWLPVPPKRVFDFLR 600
           WT L+  GA+DV   V + K++     P        GI+ + A+     VPP  +  FLR
Sbjct: 415 WTVLNCDGAEDVFIAVNSTKNLSGTSNPASSLTFLGGILCAKASMLLQNVPPAVLVRFLR 474

Query: 601 DENTRSEWDILS----NGGVVQEMAHIANG----RDTGNCV-----------SLLRVNCL 641
           +   RSEW   S    +   ++   +   G    R TG+ +            +L V  L
Sbjct: 475 EH--RSEWADFSVDAYSAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRL 532

Query: 642 QSANSSQSNMLI-----LQESCT--DPTA----SFVIYAPVDIVAMNVVLNGGDPDYVAL 690
           +  + +Q +  +     L + C+  D  A    S +++AP+D +          PD   L
Sbjct: 533 EGHSLAQEDAFVSRDIHLLQICSGIDENAVGACSELVFAPIDEMF---------PDDAPL 583

Query: 691 LPSGFAILP-----------------DGTSLHGANIGEAASGG----------SLLTVAF 723
           +PSGF I+P                 D TS  G  +G A + G          S+LT+AF
Sbjct: 584 IPSGFRIIPLDSKPGDKKEVATNRTLDLTS--GFEVGPATTAGTDASSSQNTRSVLTIAF 641

Query: 724 QILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           Q   DS     +++ +   V ++I+ +V+R+  ++S
Sbjct: 642 QFPFDSSLQDNVAVMARQYVRSVIS-SVQRVAMAIS 676


>gi|110349544|gb|ABG73247.1| class III HD-Zip protein HDZ33 [Pinus taeda]
          Length = 840

 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 160/747 (21%), Positives = 275/747 (36%), Gaps = 167/747 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                  +      L  EN   R+
Sbjct: 75  -QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSQLVYENGYFRQ 119

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           +I  +S        + VV     S P P                            L   
Sbjct: 120 QIQTVSITTTDTSCESVVT----SGPHPHH--------------------------LTPQ 149

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A     + +A   + + +  A      W+  + G          ++  P  IG  
Sbjct: 150 HPPRDASPAGFLSIAEETLTQFLSKATETAVDWI-QMPG----------MKPGPDSIGIV 198

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R      +    + +IL D   W       +     L+VL+    G   
Sbjct: 199 TISNSCTGVAARACGFAGLEPSKVADILKDRPAW-------LHDCRRLDVLTAFPTGK-G 250

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP-------AVR 439
           GA +++  +   P+ L P R+   +RY     +G+  V + SL   +  P        VR
Sbjct: 251 GAFELLYTQMYAPTTLAPARDLLTLRYTSLLEDGSLVVCERSLTGTQSGPNMPPVQHFVR 310

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
            +  PSG LI+    G   +  V+H++++   V  + + L  +      K  +  L R  
Sbjct: 311 TQMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVIRPLYESSAVLAQKMTITAL-RHL 369

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            ++A  ++  +  G         GR+  ++   ++R+   F   V+      W+ L   G
Sbjct: 370 RQVAQEVSGEVVLGW--------GRQPAALRAFSQRLCRGFNDAVNGFADDGWSLLGSDG 421

Query: 558 ADDV---------RVMTRKSVDDPGRPP---GIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            +DV         + ++ +     G      GI+ + A+     VPP  +  FLR+   R
Sbjct: 422 VEDVIIAINSSPSKFLSSQIASSDGLSALNGGIMCAKASMLLQNVPPALLVRFLREH--R 479

Query: 606 SEW-----DILSN--------------GG-----VVQEMAHIANGRDTGNCVSLLRVNCL 641
           SEW     D  S+              GG     V+  +AH     +    + L      
Sbjct: 480 SEWADCNIDAYSSATMKANAYNVPGSLGGITGSQVILPLAHTVEHEEFLEVIKLEGHGLT 539

Query: 642 QSANSSQSNMLILQ--ESCTDPTASF---VIYAPVDIVAMNVVLNGGDPDYVALLPSGFA 696
                   +M +LQ      +  A F   +++AP+D             D   LLPSGF 
Sbjct: 540 HEEALLSKDMFLLQLCSGIDEHAAGFCSQLVFAPID---------ASFADDAPLLPSGFR 590

Query: 697 ILP---------------DGTSLHGANIGEAASGG---------SLLTVAFQILVDSVPT 732
           ++P                 ++L   + G  ASG          S+LT+AFQ    +   
Sbjct: 591 VIPLESGSDVSPPNRTLDLASALEIGSAGTRASGDCGDSPCNLRSVLTIAFQFTYQNNVR 650

Query: 733 AKLSLGSVATVNNLIACTVERIKASLS 759
             ++  +   V N+IA +V+R+  +L+
Sbjct: 651 DSVAAMTRQYVRNVIA-SVQRVAIALA 676


>gi|59709573|gb|AAW88440.1| CORONA [Arabidopsis thaliana]
          Length = 836

 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 167/745 (22%), Positives = 290/745 (38%), Gaps = 167/745 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A                                    N  L E
Sbjct: 75  -QRKEASRLQAVNRKLTA-----------------------------------MNKLLME 98

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           E DR+    ++ V +   +Y     P PS P +    +   +  +  G+       L S 
Sbjct: 99  ENDRLQKQVSQLVHEN--SYFRQHTPNPSLPAK----DTSCESVVTSGQHQ-----LASQ 147

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
           +   +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 148 NPQRDASPAGLLSIAEETLAEFLSKAT-----------GTAVEWIQMPGMKPGPDSIGII 196

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EI+ D   W             ++V++     N  
Sbjct: 197 AISHGCTGVAARACGLVGLEPTRVAEIVKDRPSW-------FRECRAVDVMNVLPTAN-G 248

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  V + SL + +  P+       VR
Sbjct: 249 GTVELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVR 308

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
                SG LI+    G S +  V+H++++   V  + + L  +      K  +A L RQ 
Sbjct: 309 AEMLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAAL-RQL 367

Query: 500 ERLAS-VMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGT 556
           +++A  V  TN          N  GR+  ++  L++R+   F   V+  T   W+ + G 
Sbjct: 368 KQIAQEVTQTNSS-------VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVI-GD 419

Query: 557 GADDVRVMTRKSVDD---------PGRPP--GIVLSAATSFWLP-VPPKRVFDFLRDENT 604
             DDV +    S D           G  P   +VL A  S  L  VPP  +  FLR+   
Sbjct: 420 SMDDVTITVNSSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREH-- 477

Query: 605 RSEW---DILS------------------NGGVVQEMAHIANGRDTGNCVSLLRVNCLQS 643
           RSEW   +I +                   G V+  +AH     +    + L  +     
Sbjct: 478 RSEWADNNIDAYLAAAVKVGPCSARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPE 537

Query: 644 ANSSQSNMLILQ-----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL 698
                 ++ +LQ     +     T + +I+AP+D             D   LLPSGF I+
Sbjct: 538 DAIVPRDIFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRII 588

Query: 699 PDGT---------SLHGANIGEAASGG---------------SLLTVAFQILVDSVPTAK 734
           P  +         +L  A+  E  S G               S++T+AF+  ++S     
Sbjct: 589 PLDSAKEVSSPNRTLDLASALEIGSAGTKASTDLSGNSTCTRSVMTIAFEFGIESHMQEH 648

Query: 735 LSLGSVATVNNLIACTVERIKASLS 759
           ++  +   V  +I+ +V+R+  +LS
Sbjct: 649 VASMARQYVRGIIS-SVQRVALALS 672


>gi|414871038|tpg|DAA49595.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 835

 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 127/548 (23%), Positives = 222/548 (40%), Gaps = 125/548 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +E  Q+K WFQN+R + K  
Sbjct: 21  KYVRYTPEQVEALERVYAECPKPSSARRQQLLRECPILSNIEAKQIKVWFQNRRCRDKQ- 79

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E+ +L++ N +                TA+ ++      L  EN RL++
Sbjct: 80  ---------RNESSRLQSVNRKL---------------TAMNKL------LMEENERLQK 109

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++    A Y+ + + N        PS   + +  +    P             LR  
Sbjct: 110 QVSQLVHENA-YMKQQLQN--------PSLATDASCESNATTPAN-----------LRDA 149

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
           S P+      ++ +A   + E +  A            GTA      ++V+  P G+ P 
Sbjct: 150 SNPSG-----LLAIAEETLTEFLSKAT-----------GTAI-----DWVQ-MP-GMKPG 186

Query: 329 PTGF---------KCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  F         +  A+R   +V +    +VEIL D   W            +LEV + 
Sbjct: 187 PDSFGIVTISHGGRGVAARACGLVNLEPTKIVEILKDRPSW-------FRDCRSLEVYTM 239

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN-------L 432
             AGN  G ++++  +   P+ LVP R+ + +RY     +G+  V + SL          
Sbjct: 240 LPAGN-GGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGDGQSAA 298

Query: 433 RPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                VR    PSG L+++   G S V  V+H+++D   V  + + L  +     A++  
Sbjct: 299 TTQQFVRAEMLPSGYLVRQCEGGGSIVRIVDHLDLDAWSVPEVLRPLYESSRVV-AQKMT 357

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTW 550
            T  R   ++A   +        G +    GR+   +   ++R+   F   +S      W
Sbjct: 358 TTALRHLRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGW 409

Query: 551 TTLSGTGADDVRVMTR----KSVDDPGR------PPGIVLSAATSFWLPVPPKRVFDFLR 600
           + + G G +DV +       +S  +P        P GI+ + A+     VPP  +  FLR
Sbjct: 410 SVMCGDGMEDVIIACNSKKIRSSSNPATGFGAPGPGGIICAKASMLLQSVPPAVLVRFLR 469

Query: 601 DENTRSEW 608
           +   RSEW
Sbjct: 470 EH--RSEW 475


>gi|302805045|ref|XP_002984274.1| hypothetical protein SELMODRAFT_180804 [Selaginella moellendorffii]
 gi|300148123|gb|EFJ14784.1| hypothetical protein SELMODRAFT_180804 [Selaginella moellendorffii]
          Length = 836

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 171/730 (23%), Positives = 293/730 (40%), Gaps = 127/730 (17%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE---LG-LEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R+++ R+   LG +EP Q+K WFQN+R + K  
Sbjct: 13  KYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLGNIEPRQIKVWFQNRRCREK-- 70

Query: 149 HERHENTQLRTENEKLRADN---MRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENAR 205
            +R E ++L++ N  L A N   M   E L+  S                   L LEN  
Sbjct: 71  -QRKETSRLQSVNSSLTAMNKIIMEENERLTKHSS-----------------QLALENQC 112

Query: 206 LREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLL 265
           LR+++ +I +        P       +     +   LA+ +      + GG       L 
Sbjct: 113 LRQQLQQIRSGGG--AADPDKKSAAAADRFNDQQSALALADRSPDSEVTGGV---PQHLA 167

Query: 266 RSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGI 325
            +  +P ++    ++ +A   +   +  A      W+  + G  A    D        G 
Sbjct: 168 ITPQSPRDSSPAGLLSIAEETLNSFLAKATGTAVDWI-QIPGMKACPGPDSI------GT 220

Query: 326 GPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                     A+R   +V +  I + EIL D   W       +     LEV+ +    N 
Sbjct: 221 AAISHAGAGIAARAWGLVELEPIRVAEILKDRPSW-------LWDCRRLEVVGSFPTPN- 272

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAV------R 439
            G L+++  +   P+ L P R+ + +RY     + + AV + SL  +   PA+      R
Sbjct: 273 GGTLELVYTQMYAPTTLAPARDFWTLRYTIFLEDRSLAVCERSLTGIHNKPAIKNGDFER 332

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H +++   V  + + L  +      +  +  L    
Sbjct: 333 AEMLPSGFLIRPYEGGVSSIHVVDHWDLESWKVLEVLRPLYESSVILAQRVTLGAL-HHL 391

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD 559
           +R+     +   +GEV +   Q    ++   + R+   F   V+A     WT+    G D
Sbjct: 392 KRI-----SQESSGEVLMRGGQQP-AALRAFSHRIARGFNDAVNAFAEDGWTS---DGGD 442

Query: 560 DVRV---------MTRKSVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEW- 608
           DV +                D     G +L A +S  L  VP   +  FLR+   RSEW 
Sbjct: 443 DVTISINTALGAKAAGAQGGDRFCAFGGILCAKSSMLLQNVPAATLIRFLREH--RSEWA 500

Query: 609 --DILSNGGVVQEMAHIANGRDTGN----CV--SLLRVNCLQSANSSQ--SNMLILQ--- 655
             +I S+   V  +     G   GN    C+   LL V  ++   +     + ++LQ   
Sbjct: 501 GVNIASDS--VSTLKIGGYGTSKGNADEECLFPELLEVIKMEGYGNGMLPKDTVLLQLCT 558

Query: 656 --ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-------------- 699
             E     T + +++APVD    N          + LLPSGF ++P              
Sbjct: 559 GYEDTASGTCAQLVFAPVDPAVSND---------IPLLPSGFRVIPLDNGLDASALSRTL 609

Query: 700 DGTS-LHGANIGE------AASGG---SLLTVAFQILVDSVPTAKLSLGSVATVNNLIAC 749
           D TS L G+  G       + SGG   S+LT+AFQ + ++    ++   +   V N++  
Sbjct: 610 DLTSTLEGSADGGKFPDDFSGSGGNMRSVLTMAFQFVFEAHNREEIIASARQYVRNVMV- 668

Query: 750 TVERIKASLS 759
           +V+ I  +L+
Sbjct: 669 SVQSIAMALA 678


>gi|90110440|gb|ABD90522.1| class III homeodomain-leucine zipper [Physcomitrella patens]
          Length = 868

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 174/729 (23%), Positives = 284/729 (38%), Gaps = 158/729 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R +L +E      +EP Q+K WFQN+R + K  
Sbjct: 6   KYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK-- 63

Query: 149 HERHENTQLRTENEKLRADN---MRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENAR 205
            +R E T+L + N KL A N   M   E L+  +                   L LEN  
Sbjct: 64  -QRKEATRLVSVNAKLTALNKLLMEENERLAKHAS-----------------QLTLENHS 105

Query: 206 LREEIDRISAIAAKYVGKPVVN--YPLLSPPVPSRPLELAVGNFGAQPGIGGG---EMYG 260
           LR+++  +          P+ N  + L S  +  +  E AV N G +    GG   +++G
Sbjct: 106 LRQQLPSL----------PLTNGTHRLSSQNLLKK--ERAV-NGGDESSTQGGICVKLHG 152

Query: 261 AADLLRSISAPTEADKPMIIELA----------VAAMEELIRMAQMGEPLWMTSLDGTAA 310
            A +    S  T  D  +   L             +   L+  A+     ++    GTA 
Sbjct: 153 QAGV---ASTDTSCDSAVTGGLPHHLTPRHSPRYTSPAGLLATAEETLTEFLAKATGTAV 209

Query: 311 VLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIV 368
              +   ++  P  IG       C   A+R   +V ++   + E+L D   W       +
Sbjct: 210 DWIQLPGMKPGPDAIGIIAISHGCVGIAARACGLVALDAGKVTEVLKDRPAW-------L 262

Query: 369 SRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS 428
                +EVL     GN  G ++++  +    + L P R+   +RY     +G   + + S
Sbjct: 263 EDCRRMEVLGALPTGN-RGTIELLYTQMYASTTLAPARDYCTLRYTTILEDGNLVICERS 321

Query: 429 LDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVS 481
           L   +  P+       VR    PSG LI+    G   +  V+H +     V  + + L  
Sbjct: 322 LTGGQNGPSMPPVQSFVRGEMFPSGYLIRPCDGGGCIIHVVDHYDNGPWSVPEVLRPLYE 381

Query: 482 TGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAG 541
           +      +  +A L R   RLA+       +GE G   N      +  L +R+   F   
Sbjct: 382 SPAVLAQRSTIAAL-RHLRRLAAE-----ESGE-GNPRNGQHPAVLRTLGQRLAKGFKNA 434

Query: 542 VSASTAHTWTTLSGTGADDVRVM---TRKSVDDP--------GRPPGIVLSAATSFWLPV 590
           V+      W +    G DDV V+   T +S++              GI+ + A+     V
Sbjct: 435 VNGFADDGWVSTVSDGLDDVSVILNATSQSMEGQIASDKLLYSLGGGILCAKASMLLQNV 494

Query: 591 PPKRVFDFLRDENTRSEW---DILSN----------------GGV--VQEMAHIANGRDT 629
           PP  +  FLR+   RSEW   D+ +N                GGV  VQ    + N  + 
Sbjct: 495 PPSILIKFLREH--RSEWADYDMDANLATSFRSNGNGYAPQGGGVSHVQLPLPLPNSGEH 552

Query: 630 GNCVSLLRV---NCLQSANSSQSNMLILQESCTDPTA----SFVIYAPVDIVAMNVVLNG 682
           G  + ++++   + +Q    S+ + L+   S  D  A    + +I+APVD+         
Sbjct: 553 GEILEVVKLEDHSSVQHMVISRDSFLLQLCSGIDENAVGASAQLIFAPVDVALT------ 606

Query: 683 GDPDYVALLPSGFAILP-DGTSL------HGANIGEAASGG------------------- 716
              + + LLPSGF I P D   L      H  ++     GG                   
Sbjct: 607 ---EDIPLLPSGFCISPVDANVLDEFDLDHTLDLASTLEGGSDLRLNGDSKSNGTSSHMR 663

Query: 717 SLLTVAFQI 725
           S+LT+AFQ 
Sbjct: 664 SVLTIAFQF 672


>gi|63115354|gb|AAY33856.1| class III HD-zip protein [Gossypium barbadense]
          Length = 836

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 164/722 (22%), Positives = 270/722 (37%), Gaps = 187/722 (25%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q K  FQN+R + K  
Sbjct: 23  KYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQFKALFQNRRCREK-- 80

Query: 149 HERHENTQLRTENEKLRA-------DNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRL 201
            +R E ++L+T N KL A       +N R ++ +S   C                     
Sbjct: 81  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC--------------------- 118

Query: 202 ENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGA 261
           EN  +R+++  ++A A        V  P  S                             
Sbjct: 119 ENGYMRQQLHTVNASATDASCDSAVTTPQHS----------------------------- 149

Query: 262 ADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTF 321
              LR+ + P       ++ +A   + E +  A            GTA    +   ++  
Sbjct: 150 ---LRNANNPAG-----LLSIAEETLAEFLSKAT-----------GTAVNWVQMPGMKPG 190

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  +G   T   C   A+R   +V +    + EIL D   W             LEV + 
Sbjct: 191 PDSVGIFATSQSCSGMAARACGLVSLEPTKIAEILKDRPSW-------FRDCRKLEVFTM 243

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-- 437
             AGN  G ++++  +   P+ L P R+ + +RY      G+  V + SL      P+  
Sbjct: 244 FPAGN-GGTIELVYTQMFAPTTLAPARDFWTLRYTTTLENGSLVVCERSLSGSGAGPSVA 302

Query: 438 -----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                VR    PSG LI+    G S +  V+H+ ++   V  + + L  +      K  +
Sbjct: 303 SAAQFVRAEVLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSRVIAQKMTI 362

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTW 550
             L R   ++A   +        G +    GR+   +   ++R+   F   ++      W
Sbjct: 363 PAL-RYVRQIAQETS--------GEVVYSLGRQPAVLRTFSQRLSRGFNEAINGFNEDGW 413

Query: 551 TTLSGTGADDVRVMTR--KSVDDPGRPP-------GIVLSAATSFWLPVPPKRVFDFLRD 601
           + ++  G +DV +     KS+ +            G++ + A+     VPP  +  FLR+
Sbjct: 414 SIMNCDGTEDVIIAINSGKSLSNSSNLTTGLSFLGGVLCAKASMLLQNVPPAVLVRFLRE 473

Query: 602 ENTRSEW-----DILSNGGVVQEMAHIANGRDT-----------GNCV---SLLRVNCLQ 642
              R EW     D  S   +          R T           G  V    LL V  L+
Sbjct: 474 H--RLEWADFNVDAYSAASLKAGTYTYPGMRPTSFTGSQIIMPLGQTVEHEELLEVIRLE 531

Query: 643 SANSSQSNMLI-----LQESCT--DPTA----SFVIYAPVDIVAMNVVLNGGDPDYVALL 691
             + +Q + L+     L + C+  D  A    S +++AP+D +          PD  ALL
Sbjct: 532 GQSLTQEDALLSRDIHLLQICSGIDDNAVGACSELVFAPIDEMF---------PDDAALL 582

Query: 692 PSGFAILP--------------DGTSLHGANIGEAASGG----------SLLTVAFQILV 727
           PSGF I+P              D TS     +G A S            S+LT+AFQ   
Sbjct: 583 PSGFRIIPLESKPDSLATNRTLDLTS--SLEVGPATSQAAGDSPSQNARSVLTIAFQFPF 640

Query: 728 DS 729
           D+
Sbjct: 641 DT 642


>gi|255578153|ref|XP_002529946.1| DNA binding protein, putative [Ricinus communis]
 gi|223530576|gb|EEF32454.1| DNA binding protein, putative [Ricinus communis]
          Length = 842

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 154/688 (22%), Positives = 263/688 (38%), Gaps = 165/688 (23%)

Query: 74  ENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GL 129
           ++ E +SG   +   +  K Y R+T  Q++ +E  + ECP P   +R++L RE      +
Sbjct: 7   QHRETSSGSINKHLTDSGK-YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNI 65

Query: 130 EPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAI 189
           EP Q+K WFQN+R + K           R E+ +L+  N +                TA+
Sbjct: 66  EPKQIKVWFQNRRCREKQ----------RKESSRLQTVNRKL---------------TAM 100

Query: 190 GEMSFDEH--------HLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLE 241
            ++  +E+         L  EN  +R+++   SA A       VV  P  S         
Sbjct: 101 NKLLMEENDRLQKQVSQLVCENGYMRQQLQTASA-ATDASCDSVVTTPQHS--------- 150

Query: 242 LAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLW 301
                                  LR  + P       ++ +A   + E +  A       
Sbjct: 151 -----------------------LRDANNPAG-----LLSIAEETLAEFLSKAT------ 176

Query: 302 MTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQ 359
                GTA    +   ++  P  +G       C   A+R   +V +    + EIL D   
Sbjct: 177 -----GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPS 231

Query: 360 WSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGE 419
           W            +LEV +   AGN  G ++++ ++   P+ L P R+ + +RY      
Sbjct: 232 W-------FRDCRSLEVFTMFPAGN-GGTIELVYSQVYAPTTLAPARDFWTLRYTSSLDN 283

Query: 420 GTWAVVDVSLDNLRPSP-------AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV 472
           G+  V + SL      P        VR    PSG LI+    G S +  V+H+ ++   V
Sbjct: 284 GSLVVCERSLSGSGAGPNAAAAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEAWSV 343

Query: 473 HNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKL 530
             + + L  +      K  +A L R   ++A   +  +  G         GR+   +   
Sbjct: 344 PEVLRPLYESSKVVAQKMTIAAL-RFIRQIAQETSGEVVYGL--------GRQPAVLRTF 394

Query: 531 AERMVISFCAGVSASTAHTWTTLSGTGADDVRVM---------TRKSVDDPGRPPGIVLS 581
           ++R+   F   ++      W+ +S  GA+DV V          T  + +      GI+ +
Sbjct: 395 SQRLSRGFNDAINGFNDDGWSLMSCDGAEDVIVTINSTKNLSSTSNAANSFAFLGGILCA 454

Query: 582 AATSFWLPVPPKRVFDFLRDENTRSEWDILS----NGGVVQEMAHIANG----RDTGNCV 633
            A+     VPP  +  FLR+   RSEW   +    +   ++  ++   G    R TG+ +
Sbjct: 455 KASMLLQNVPPAVLVRFLREH--RSEWADFNVDAYSAASLKAGSYAFPGMRPTRFTGSQI 512

Query: 634 -----------SLLRVNCLQSANSSQSNMLI-----LQESCT--DPTA----SFVIYAPV 671
                       LL V  L+  +  Q +  +     L + C+  D  A    S +++AP+
Sbjct: 513 IMPLGHTIEHEELLEVIRLEGHSLVQEDAFVSRDIHLLQICSGIDENAVGACSELVFAPI 572

Query: 672 DIVAMNVVLNGGDPDYVALLPSGFAILP 699
           D +          PD   LLPSGF I+P
Sbjct: 573 DEMF---------PDDAPLLPSGFRIIP 591


>gi|187609452|sp|A2WLR5.2|HOX29_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX29; AltName:
           Full=HD-ZIP protein HOX29; AltName: Full=Homeodomain
           transcription factor HOX29; AltName: Full=OsHox29
          Length = 861

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 170/764 (22%), Positives = 306/764 (40%), Gaps = 175/764 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      ++P Q+K WFQN+R + K  
Sbjct: 5   KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCREKQ- 63

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E+ +L+A N +                TA+ ++      L  EN RL++
Sbjct: 64  ---------RKESSRLQALNRKL---------------TAMNKL------LMEENDRLQK 93

Query: 209 EIDRI------SAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAA 262
           ++ ++        +AA  + + V  +P  +       L  A  +   +  +  G  +   
Sbjct: 94  QVSQLVYDHGRHGVAAAGMMRRVPAFPPQAAAAAGHQLATAT-DTSCESVVTSGHHHQQQ 152

Query: 263 DLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFP 322
                   P +A    ++ +A   + E +  A            GTA    +   ++  P
Sbjct: 153 QHNVVQPPPRDASPAGLMSIAEETLTEFLSKAT-----------GTAVEWLQMPGMKPGP 201

Query: 323 RGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTG 380
             IG       C   A+R   +V M    + EIL D   W       +    +++V++  
Sbjct: 202 DSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRPLW-------LRDCRSMDVVNVL 254

Query: 381 VAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR--PS--- 435
            AG  NG ++++  +   P+ L P R+ + +RY     +G+  V + SL + +  PS   
Sbjct: 255 PAGA-NGTIELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLVVCERSLSSKQGGPSMPL 313

Query: 436 --PAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVA 493
             P +R    PSG LI+    G S +  V+H++++   V  + + L  +      K  +A
Sbjct: 314 VQPFIRGEMLPSGFLIRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKISMA 373

Query: 494 TLDRQCERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWT 551
            L R   ++A     ++ TG         GR+  ++  L++++   F   ++      W+
Sbjct: 374 AL-RYLRQVAHEDTRSVITGW--------GRQPAALRALSQKLTRGFNEALNGLADDGWS 424

Query: 552 TLSGTGADDV-------RVMTRKSVDDPGRP---PGIVLSAATSFWLPVPPKRVFDFLRD 601
            +   G DDV       +V+   +    G P    G++ + A+     V P  +  FLR+
Sbjct: 425 VIESDGVDDVCISVNSSKVIGCNATFSSGLPIVSTGVLCAKASMLLQDVSPPSLLQFLRE 484

Query: 602 ENTRSEW-----DIL-------------------SNGGVVQEMAHIANGRDTGNCVSLLR 637
              RS+W     D                      +G V+  +AH     +       L 
Sbjct: 485 H--RSQWADSNLDAFFASAMKPNFCNLPMSRLGGFSGQVILPLAHTFEPEE------FLE 536

Query: 638 VNCLQSANSSQS-----NMLILQ-----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDY 687
           V  L +A++ Q      ++ +LQ     E  +  T S +I+AP+D             D 
Sbjct: 537 VIKLGNASNYQDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPID---------ASFSDD 587

Query: 688 VALLPSGFAILP-----DGTS----LHGANIGEAAS-----------GGS---------- 717
             LLPSGF I+P     D +S    L  A+  EAA+           GG+          
Sbjct: 588 SPLLPSGFRIIPIDSPLDTSSPNCTLDLASTLEAATPRSRISGVNGGGGTCAAAAASSSS 647

Query: 718 --LLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
             ++T+AFQ   D      ++  +   + N+I+ +V+RI  +LS
Sbjct: 648 KAVMTIAFQFAFDGHLQDSVAAMARQYMRNIIS-SVQRIAVALS 690


>gi|414871037|tpg|DAA49594.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 648

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 126/548 (22%), Positives = 221/548 (40%), Gaps = 125/548 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +E  Q+K WFQN+R + K  
Sbjct: 21  KYVRYTPEQVEALERVYAECPKPSSARRQQLLRECPILSNIEAKQIKVWFQNRRCRDKQ- 79

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E+ +L++ N +                TA+ ++      L  EN RL++
Sbjct: 80  ---------RNESSRLQSVNRKL---------------TAMNKL------LMEENERLQK 109

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++    A Y+ + + N        PS   + +  +    P             LR  
Sbjct: 110 QVSQLVHENA-YMKQQLQN--------PSLATDASCESNATTPAN-----------LRDA 149

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
           S P+      ++ +A   + E +  A            GTA      ++V+    G+ P 
Sbjct: 150 SNPSG-----LLAIAEETLTEFLSKA-----------TGTAI-----DWVQM--PGMKPG 186

Query: 329 PTGF---------KCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  F         +  A+R   +V +    +VEIL D   W            +LEV + 
Sbjct: 187 PDSFGIVTISHGGRGVAARACGLVNLEPTKIVEILKDRPSW-------FRDCRSLEVYTM 239

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN-------L 432
             AGN  G ++++  +   P+ LVP R+ + +RY     +G+  V + SL          
Sbjct: 240 LPAGN-GGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGDGQSAA 298

Query: 433 RPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                VR    PSG L+++   G S V  V+H+++D   V  + + L  +     A++  
Sbjct: 299 TTQQFVRAEMLPSGYLVRQCEGGGSIVRIVDHLDLDAWSVPEVLRPLYESSRVV-AQKMT 357

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTW 550
            T  R   ++A   +        G +    GR+   +   ++R+   F   +S      W
Sbjct: 358 TTALRHLRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGW 409

Query: 551 TTLSGTGADDVRVMTR----KSVDDPGR------PPGIVLSAATSFWLPVPPKRVFDFLR 600
           + + G G +DV +       +S  +P        P GI+ + A+     VPP  +  FLR
Sbjct: 410 SVMCGDGMEDVIIACNSKKIRSSSNPATGFGAPGPGGIICAKASMLLQSVPPAVLVRFLR 469

Query: 601 DENTRSEW 608
           +   RSEW
Sbjct: 470 EH--RSEW 475


>gi|302781336|ref|XP_002972442.1| hypothetical protein SELMODRAFT_270954 [Selaginella moellendorffii]
 gi|110349518|gb|ABG73234.1| class III HD-Zip protein HDZ32 [Selaginella moellendorffii]
 gi|300159909|gb|EFJ26528.1| hypothetical protein SELMODRAFT_270954 [Selaginella moellendorffii]
          Length = 840

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 174/740 (23%), Positives = 297/740 (40%), Gaps = 150/740 (20%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE---LG-LEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R+++ R+   LG +EP Q+K WFQN+R + K  
Sbjct: 13  KYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLGNIEPRQIKVWFQNRRCREK-- 70

Query: 149 HERHENTQLRTENEKLRADN---MRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENAR 205
            +R E ++L++ N  L A N   M   E L+  S                   L LEN  
Sbjct: 71  -QRKETSRLQSVNSSLTAMNKIIMEENERLTKHSS-----------------QLALENQC 112

Query: 206 LREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIG------GGEMY 259
           LR+++ +I +      G    +        P +    A   F  Q  +         E+ 
Sbjct: 113 LRQQLQQIRS------GGGAAD--------PDKKSAAAADRFNDQSALALADRSPDSEVT 158

Query: 260 GAADLLRSIS--APTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEY 317
           G      +I+  +P ++    ++ +A   +   +  A            GTA    +   
Sbjct: 159 GGVPQHLAITPQSPRDSSPAGLLSIAEETLNSFLAKAT-----------GTAVDWIQIPG 207

Query: 318 VRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLE 375
           ++  P  IG           A+R   +V +  I + EIL D   W       +     LE
Sbjct: 208 MKPGPDSIGTAAISHAGAGIAARAWGLVELEPIRVAEILKDRPSW-------LWDCRRLE 260

Query: 376 VLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPS 435
           V+ +    N  G L+++  +   P+ L P R+ + +RY     + + AV + SL  +   
Sbjct: 261 VVGSFPTPN-GGTLELVYTQMYAPTTLAPARDFWTLRYTIFLEDRSLAVCERSLTGIHNK 319

Query: 436 PAV------RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAK 489
           PA+      R    PSG LI+    G S +  V+H +++   V  + + L  +      +
Sbjct: 320 PAIKNGDFERAEMLPSGFLIRPYEGGVSSIHVVDHWDLESWKVLEVLRPLYESSVILAQR 379

Query: 490 RWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHT 549
             +  L    +R+     +   +GEV +   Q    ++   + R+   F   V+A     
Sbjct: 380 VTLGAL-HHLKRI-----SQESSGEVLMRGGQQP-AALRAFSHRIARGFNDAVNAFAEDG 432

Query: 550 WTTLSGTGADDVRV---------MTRKSVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFL 599
           WT+    G DDV +                D     G +L A +S  L  VP   +  FL
Sbjct: 433 WTS---DGGDDVTISINTALGAKAAGAQGGDRFCAFGGILCAKSSMLLQNVPAATLIRFL 489

Query: 600 RDENTRSEW---DILSNGGVVQEMAHIANGRDTGN----CV--SLLRVNCLQSANSSQ-- 648
           R+   RSEW   +I S+   V  +     G   GN    C+   LL V  ++   +    
Sbjct: 490 REH--RSEWAGVNIASDS--VSTLKIGGYGTSKGNADEECLFPELLEVIKMEGYGNGMLP 545

Query: 649 SNMLILQ-----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP---- 699
            + ++LQ     E     T + +++APVD    N          + LLPSGF ++P    
Sbjct: 546 KDTVLLQLCTGYEDTASGTCAQLVFAPVDPAVSND---------IPLLPSGFRVIPLDNG 596

Query: 700 ----------DGTS-LHGANIGE------AASGG---SLLTVAFQILVDSVPTAKLSLGS 739
                     D TS L G+  G       + SGG   S+LT+AFQ + ++    ++   +
Sbjct: 597 LDASALSRTLDLTSTLEGSADGGKFPDDFSGSGGNMRSVLTMAFQFVFEAHNREEIIASA 656

Query: 740 VATVNNLIACTVERIKASLS 759
              V N++  +V+ I  +L+
Sbjct: 657 RQYVRNVMV-SVQSIAMALA 675


>gi|402575788|gb|AFQ69084.1| HB8, partial [Pisum sativum]
          Length = 550

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 129/547 (23%), Positives = 215/547 (39%), Gaps = 118/547 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 19  KYVRYTPEQVEALERLYHECPKPTSLRRQQLIRECPILSHIEPKQIKVWFQNRRCREKQ- 77

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E  +L+A N +                            L   N  L E
Sbjct: 78  ---------RKEAGRLQAVNRK----------------------------LTAMNKLLME 100

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           E DR+     K V   V    +     P+    +A  +   +  +  G+ +         
Sbjct: 101 ENDRLQ----KQVSHLVYENSVFRQHTPNG--AIATTDTSCESVVTSGQQH--------- 145

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIG-- 326
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 146 -PPRDASPAGLLSIAEETLAEFLSKAT-----------GTAVEWVQMPGMKPGPDSIGIV 193

Query: 327 PKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
               G    A+R   +V +    + EIL D   W            T++VL+    GN  
Sbjct: 194 AISHGSPGVAARACGLVGLEPARVAEILKDRLAW-------YRDCRTVDVLNVMSTGN-G 245

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  V + SL+N++  P+       VR
Sbjct: 246 GTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNIQNGPSMPPVPHFVR 305

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H+ ++   V  + + L  +      +  +A L R  
Sbjct: 306 ADVLPSGYLIRPCEGGGSIIHIVDHMLLEPWSVPEVLRPLYESSMLLAQRTTMAAL-RHL 364

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            +++  ++    TG         GR+  ++  L++R+   F   V+  T   W+ L   G
Sbjct: 365 RQISQEVSQPSVTGW--------GRRPAALRTLSQRLSKGFNEAVNGFTDDGWSMLESDG 416

Query: 558 ADDVRVMTRKSVDDPGRPPGI---------------VLSAATSFWLP-VPPKRVFDFLRD 601
            DDV ++   S   P +  GI               VL A  S  L  VPP  +  FLR+
Sbjct: 417 IDDVTLIVNSS---PSKMMGINNGYNNSGFPSVTSSVLCAKASMLLQNVPPAILLRFLRE 473

Query: 602 ENTRSEW 608
              RSEW
Sbjct: 474 H--RSEW 478


>gi|317160482|gb|ADV04323.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 836

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 166/747 (22%), Positives = 277/747 (37%), Gaps = 167/747 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                  +      L  EN   R+
Sbjct: 75  -QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSQLVYENGYFRQ 119

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           +I  +S        + VV     S P P                            L   
Sbjct: 120 QIQTVSIATTDTSCESVVT----SGPHPHH--------------------------LTPQ 149

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A     + +A   + +L+  A      W+  + G          ++  P  IG  
Sbjct: 150 HPPRDASPAGFLSIAEETLTQLLSKATETAVDWI-QMPG----------MKPGPDSIGIV 198

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R      +    + +IL D   W       +     L VL+    G   
Sbjct: 199 TISNSCTGVAARACGFAGLEPSKVADILKDRPAW-------LHDCRCLNVLTAFPTGK-G 250

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP-------AVR 439
           G ++V+  +   P+ L P R+   +RY     +G+  V + SL  ++  P        VR
Sbjct: 251 GTVEVLYTQMYAPTTLAPARDLLTLRYTSLLEDGSLVVCERSLTGIQSGPNMPSVQHFVR 310

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
            +  PSG LI+    G   +  V+H++++   V  + + L  + +A  A R   T  R  
Sbjct: 311 AQMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVIRPLYES-SAVLATRVTITALRHL 369

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            ++A  ++  +  G         GR+  ++   ++R+   F   V+      W+ L   G
Sbjct: 370 RQVAQEVSGEVVLGW--------GRQPAALRAFSQRLCRGFNDAVNGFVDDGWSLLGSDG 421

Query: 558 ADDVRVMTRK-----------SVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENTR 605
            +DV +               S D      G +L A  S  L  VPP  +  FLR+   R
Sbjct: 422 VEDVIIAINSSPSKFLGSQLASSDGISALNGGILCAKASMLLQNVPPALLVRFLREH--R 479

Query: 606 SEW-----DILSN--------------GG-----VVQEMAHIANGRDTGNCVSLLRVNCL 641
           SEW     D  S+              GG     V+  +AH     +    + L      
Sbjct: 480 SEWADCNVDAYSSATMKANAYNVPGSLGGITGSQVILPLAHTVEHEEFLEVIKLEGQGLT 539

Query: 642 QSANSSQSNMLILQE-SCTDPTA----SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFA 696
                   +M +LQ  S  D  A    + +++AP+D             D   LLPSGF 
Sbjct: 540 HEEALLSKDMFLLQLCSGIDEHAVGFCAQLVFAPID---------ASFADDAPLLPSGFR 590

Query: 697 ILP---------------DGTSLHGANIGEAASGG---------SLLTVAFQILVDSVPT 732
           ++P                 ++L   + G  ASG          S+LT+AFQ    +   
Sbjct: 591 VIPLESGSDASPPNRTLDLASALEVGSAGTRASGDCGDSPYNLRSVLTIAFQFTYQNHVR 650

Query: 733 AKLSLGSVATVNNLIACTVERIKASLS 759
             ++  +   V ++IA +V+R+  +L+
Sbjct: 651 DSVAAMARQYVRHVIA-SVQRVAIALA 676


>gi|357126818|ref|XP_003565084.1| PREDICTED: homeobox-leucine zipper protein HOX29-like isoform 1
           [Brachypodium distachyon]
          Length = 839

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 159/752 (21%), Positives = 294/752 (39%), Gaps = 178/752 (23%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGL----EPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE  +    +P Q+K WFQN+R + K  
Sbjct: 15  KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECAVLAAVDPKQIKVWFQNRRCREKQ- 73

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E+ +L++ N +                TA+ ++      L  EN RL++
Sbjct: 74  ---------RRESGRLQSLNRKL---------------TAMNKL------LMEENDRLQK 103

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++  +      Y  +             +    LA  +   +  +  G+           
Sbjct: 104 QVSSLVYENGYYRQQH------------THSAGLATTDTSCESVVTSGQQQNVV----VP 147

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 148 PPPRDASPAGLMSIAEETLTEFLSKAT-----------GTAVEWVQMPGMKPGPDSIGII 196

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V M    + EIL D   W       +    ++EV++   AG+ N
Sbjct: 197 AISHGCAGVAARACGLVGMEPAKVAEILKDRPLW-------LRDCRSMEVVNVLPAGS-N 248

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR--PS-----PAVR 439
           G ++++  +    + L P R+ + +RY     +G+  V + SL + +  PS     P +R
Sbjct: 249 GTIELLYMQLYAQTTLAPARDFWLLRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFIR 308

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H++++ R V  + + L  +      K  +A L R  
Sbjct: 309 GEMLPSGFLIRPSDGGGSVIHIVDHLDLEPRSVPEVVRPLYESSAIVAQKMSMAAL-RYL 367

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            +LA     +I TG         GR+  ++  L++++   F   +   T   W+ +   G
Sbjct: 368 RQLAHEDTHSIITGW--------GRQPAALRALSQKLTRGFNEALCGLTDDGWSAIESDG 419

Query: 558 ADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            DDV +    S++             P    G++ + A+     V P  +  FL +   R
Sbjct: 420 VDDVCISVNSSLNKVISCNATFGDGLPIVSAGVLCAKASMLLQDVSPPSLLQFLHEH--R 477

Query: 606 SEWDILS------------------------NGGVVQEMAHIANGRDTGNCVSLLRVNCL 641
           S+W   +                        +G V+  +AH  +  +       L V  +
Sbjct: 478 SQWADSTLDAFFASALKPNFCNLPMSRLGGFSGQVILPLAHTFDPEE------FLEVIKI 531

Query: 642 QSANSSQS-----NMLILQ-----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALL 691
            +A++ Q      ++ +LQ     +  T  + S +I+AP+D             D   LL
Sbjct: 532 GNASNYQDTLMHRDLFLLQMYNGVDENTVGSCSELIFAPID---------ASFSDDSPLL 582

Query: 692 PSGFAILPDGTSL--------------------HGANIGEAASGG----SLLTVAFQILV 727
           PSGF I+P  + L                     G   G  +  G    +++T+AFQ   
Sbjct: 583 PSGFRIIPIDSPLDTSSPNCTLDLASTLEVGTPRGRMTGSGSVNGAGMKAVMTIAFQFAF 642

Query: 728 DSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           +S     ++  +   + ++I+ +V+RI  +LS
Sbjct: 643 ESHLQDSVAAMAQQYMRSIIS-SVQRIALALS 673


>gi|187609456|sp|Q5QMZ9.2|HOX29_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX29; AltName:
           Full=HD-ZIP protein HOX29; AltName: Full=Homeodomain
           transcription factor HOX29; AltName: Full=OSHB5;
           AltName: Full=OsHox29
 gi|187369569|dbj|BAG31403.1| class III homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
          Length = 868

 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 169/764 (22%), Positives = 304/764 (39%), Gaps = 175/764 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      ++P Q+K WFQN+R + K  
Sbjct: 12  KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCREKQ- 70

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E+ +L+A N +                TA+ ++      L  EN RL++
Sbjct: 71  ---------RKESSRLQALNRKL---------------TAMNKL------LMEENDRLQK 100

Query: 209 EIDRI------SAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAA 262
           ++ ++        +AA  + + V  +P  +       L  A  +   +  +  G  +   
Sbjct: 101 QVSQLVYDHGRHGVAAAGMMRRVPAFPPQAAAAAGHQLATAT-DTSCESVVTSGHHHQQQ 159

Query: 263 DLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFP 322
                   P +A    ++ +A   + E +  A            GTA    +   ++  P
Sbjct: 160 QHNVVQPPPRDASPAGLMSIAEETLTEFLSKAT-----------GTAVEWLQMPGMKPGP 208

Query: 323 RGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTG 380
             IG       C   A+R   +V M    + EIL D   W       +    +++V++  
Sbjct: 209 DSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRPLW-------LRDCRSMDVVNVL 261

Query: 381 VAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR--PS--- 435
            AG  NG ++++  +   P+ L P R+ + +RY     +G+  V + SL + +  PS   
Sbjct: 262 PAGA-NGTIELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLVVCERSLSSKQGGPSMPL 320

Query: 436 --PAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVA 493
             P +R    PSG LI+    G S +  V+H++++   V  + + L  +      K  +A
Sbjct: 321 VQPFIRGEMLPSGFLIRPSDVGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKISMA 380

Query: 494 TLDRQCERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWT 551
            L R   ++A     ++ TG         GR+  ++  L++++   F   ++      W+
Sbjct: 381 AL-RYLRQVAHEDTRSVITGW--------GRQPAALRALSQKLTRGFNEALNGLADDGWS 431

Query: 552 TLSGTGADDV-------RVMTRKSVDDPGRP---PGIVLSAATSFWLPVPPKRVFDFLRD 601
            +   G DDV       +V+   +    G P    G++ + A+     V P  +  FLR+
Sbjct: 432 VIESDGVDDVCISVNSSKVIGCNATFSSGLPIVSTGVLCAKASMLLQDVSPPSLLQFLRE 491

Query: 602 ENTRSEW-----DIL-------------------SNGGVVQEMAHIANGRDTGNCVSLLR 637
              RS+W     D                      +G V+  +AH     +       L 
Sbjct: 492 H--RSQWADSNLDAFFASTMKPNFCNLPMSRLGGFSGQVILPLAHTFEPEE------FLE 543

Query: 638 VNCLQSANSSQS-----NMLILQ-----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDY 687
           V  L +A++ Q      ++ +LQ     E  +  T S +I+AP+D             D 
Sbjct: 544 VIKLGNASNYQDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPID---------ASFSDD 594

Query: 688 VALLPSGFAILP-----DGTS----LHGANIGEAASGGS--------------------- 717
             LLPSGF I+P     D +S    L  A+  EAA+  S                     
Sbjct: 595 SPLLPSGFRIIPIDSPLDTSSPNCTLDLASTLEAATPRSRISGVNGGGGGCAAAAASSSS 654

Query: 718 --LLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
             ++T+AFQ   D      ++  +   + N+I+ +V+RI  +LS
Sbjct: 655 KAVMTIAFQFAFDGHLQDSVAAMARQYMRNIIS-SVQRIAVALS 697


>gi|110349522|gb|ABG73236.1| class III HD-Zip protein HB11 [Physcomitrella patens]
          Length = 880

 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 179/770 (23%), Positives = 305/770 (39%), Gaps = 158/770 (20%)

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQVKFWFQN 140
           EQ  +   +Y R+T  Q++ +E  + ECP P   +R +L +E      +EP Q+K WFQN
Sbjct: 11  EQTMDSSGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQN 70

Query: 141 KRTQMKTQHERHENTQLRTENEKLRADN---MRYREALSNASCPNCGGPTAIGEMSFDEH 197
           +R + K   +R E ++L + N KL A N   M   E L+  +                  
Sbjct: 71  RRCREK---QRKEASRLVSVNAKLTALNKLLMEENERLAKHTS----------------- 110

Query: 198 HLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGG- 256
            L LEN  LR+++           G P+ +         +   E AV N G +    GG 
Sbjct: 111 QLTLENHALRQQLP----------GLPLTDGRHRLSSQNALKKEGAV-NGGDESSTQGGI 159

Query: 257 --EMYGAADLLRSISAPTEADKPMIIELAVAAMEE----------LIRMAQMGEPLWMTS 304
              ++G A +    S  T  D  +   L      +          L+ +A+     ++  
Sbjct: 160 CVRIHGQAGV---ASTDTSCDSAVTGGLPHRLTPQHSPRDTSPAGLLAIAEETLTDFLAK 216

Query: 305 LDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWST 362
             GTA    +   ++  P  IG       C   A+R   +V ++   + E+L D   W  
Sbjct: 217 ATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACGLVALDASKVTEVLKDRPAWQ- 275

Query: 363 VFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTW 422
                      +EVL      N  G ++++  +   P+ L   R+   +RY     +G  
Sbjct: 276 ------QDCRRMEVLGVLPTAN-GGTIELLYTQMYAPTTLASARDYCTLRYTTILEDGNL 328

Query: 423 AVVDVSL---DNLRPSPAVRCRRR----PSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNL 475
            + + SL    N  P P V+   R    PSG LI+    G   +  V+H + +   V  +
Sbjct: 329 VICERSLIGGQNGPPMPPVQSFVRGEMFPSGYLIRPSDGGGCIIHVVDHYDNERWSVPEV 388

Query: 476 YKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSML--KLAER 533
            + L  +      +  +A L R   RLAS         E G    ++G+  ++   L++R
Sbjct: 389 LRPLYESPAVLAQRSTIAAL-RHLRRLAS--------EESGEGNPRNGQHPVVLRTLSQR 439

Query: 534 MVISFCAGVSASTAHTWTTLSGTGADDVRVM---TRKSVDDP--------GRPPGIVLSA 582
           +   F   V+      W +    G +DV VM   T KS++              GI+ + 
Sbjct: 440 LAKGFKNAVNGFGDDGWVSTVSDGLEDVSVMLNATPKSMEGQIASDKLLYSLGGGILCAK 499

Query: 583 ATSFWLPVPPKRVFDFLRDENTRSEW---DILSN---------------GGV--VQEMAH 622
           A+     V P  +  FLR+   RSEW   DI +N               GGV  VQ    
Sbjct: 500 ASMLLQNVSPSLLIGFLREH--RSEWADFDIDANVATSFRSNGNSYARGGGVSHVQLPLP 557

Query: 623 IANGRDTGNCVSLLRV---NCLQSANSSQSNMLILQESCTDPTA----SFVIYAPVDIVA 675
           +A+  + G  + ++++   + +Q    S+ + L+   S  D  A    + +I+APVD+  
Sbjct: 558 LAHSGEHGEILEVVKLEGHSSVQHMVLSRDSFLLQLCSGIDENAVGASAQLIFAPVDVAL 617

Query: 676 MNVVLNGGDPDYVALLPSGFAILP-DGTSLHGANI-------------------GEAASG 715
                     + + LLPSGF + P D + + G ++                   G+  S 
Sbjct: 618 A---------EDIPLLPSGFCVSPIDASVVGGFDLDRTLDLASTLEGGSDLRLNGDTKSN 668

Query: 716 G------SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           G      S+LT+AFQ   +       ++ +   V  ++A +V+R+  +L+
Sbjct: 669 GTSGQMRSVLTIAFQFAYEVHTRETCAVMARQYVRTVVA-SVQRVAMALA 717


>gi|226531570|ref|NP_001146215.1| uncharacterized protein LOC100279785 [Zea mays]
 gi|219886211|gb|ACL53480.1| unknown [Zea mays]
 gi|414868944|tpg|DAA47501.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 854

 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 164/719 (22%), Positives = 273/719 (37%), Gaps = 171/719 (23%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELG----LEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q+  +E  + ECP P   +R++L R+      +EP Q+K WFQN+R + K  
Sbjct: 23  KYVRYTAEQVDALELAYGECPKPSSLRRQQLIRDCAVLTNVEPRQIKVWFQNRRCREK-- 80

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E+++L+T N KL A N    E                            EN RL++
Sbjct: 81  -QRRESSRLQTVNRKLGAMNKLLME----------------------------ENDRLQK 111

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ R+            +   L SP V       A  +   +  +  G+     +   ++
Sbjct: 112 QVSRL------VFDNGYMKNRLHSPSV-------ATTDTSCESVVTSGQHKQQQN--PAV 156

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P + D      L   A E L          +M+   GTA    +   ++  P  +G  
Sbjct: 157 LHPPQRDANNPAGLLAIAEETLAE--------FMSKATGTAVNWVQMVGMKPGPDSVGII 208

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W         R   L V+ TG      
Sbjct: 209 AVSHNCSGVAARACGLVSLEPTKVAEILKDRASWYR----DCRRVDILHVIPTG----NG 260

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +    + L   R+ + +RY     +G+  + + SL +    P+       +R
Sbjct: 261 GTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSLVICERSLTHSTGGPSGPKTPDFIR 320

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+HV+++   V  + + L  +      K   A L R  
Sbjct: 321 AEVLPSGYLIRPCDGGGSMIYIVDHVDLNACSVPEVLRPLYESPKILAQKMTAAAL-RHI 379

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTT-LSGT 556
            ++A   +   P G         GR+   +   ++R+   F   VS      W++ LS  
Sbjct: 380 RQIAHESSGETPYGA--------GRQPAVLRTFSQRLSRGFNDAVSGFPDDGWSSLLSSD 431

Query: 557 GADDVRVMTRKSVD-----DPGRPP-------GIVLSAATSFWLPVPPKRVFDFLRDENT 604
           GA+D+ +    S +     D    P       GI+ + A+     VPP  +  FLR+   
Sbjct: 432 GAEDISITINSSPNKLIGSDVSPSPFFSAMGGGIMCAKASMLLQNVPPALLVRFLREH-- 489

Query: 605 RSEWDI--------------------LSNGGVV--QEMAHIANGRDTGNCVSLLRVNCLQ 642
           RSEW                      L  GG +  Q +  +A   +   C+ ++R   LQ
Sbjct: 490 RSEWADPGVDAYSAASLRANPYNVPGLRAGGFMGNQVILPLARTVEHEECLEVIR---LQ 546

Query: 643 SANSSQSNMLI-----LQESCTD-----PTA-SFVIYAPVDIVAMNVVLNGGDPDYVALL 691
               S   +L+     L + C+      P A + +++AP+D             D   LL
Sbjct: 547 GHGFSHDEVLMSPDMFLLQLCSGIDEDAPGACAQLVFAPID---------ESFADDAPLL 597

Query: 692 PSGFAILPDGT---------SLHGANIGEAASGG----------------SLLTVAFQI 725
           PSGF ++P            +L  A+  E  SGG                S+LT+AFQ 
Sbjct: 598 PSGFRVIPLDAKTDVPSATRTLDLASALEVGSGGGLCALSDSGSGTRSTRSVLTIAFQF 656


>gi|109729905|tpg|DAA05766.1| TPA_inf: class III HD-Zip protein REV1 [Lotus japonicus]
          Length = 841

 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 148/661 (22%), Positives = 253/661 (38%), Gaps = 146/661 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 22  KYVRYTAGQVEALERVYTECPKPSSLRRQQLIRECPVLANVEPKQIKVWFQNRRCREK-- 79

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A                                    N  L E
Sbjct: 80  -QRKEASRLQAVNRKLNA-----------------------------------MNKLLME 103

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           E DR+    ++ V +       L  P  +          G   G G      + + +R  
Sbjct: 104 ENDRLQKQVSQLVCENGFMRQQLQAPSAA----------GTTDGNGDSVATTSRNSMRDA 153

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
           ++P        + +A   + E +  A            GTA    +   ++  P  +G  
Sbjct: 154 NSPAG-----FLSIAEETLAEFLSKAT-----------GTAVDWVQLPGMKPGPDSVGIF 197

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W            +LEV +   AGN  
Sbjct: 198 TISQSCSGVAARACGLVSLEPNKVAEILKDRLSW-------FRDCRSLEVFTMFPAGN-G 249

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP-------AVR 439
           G ++++  +   P  L P R+ + +RY      G+  V + SL      P        VR
Sbjct: 250 GTIELVYTQTYAPMTLSPARDFWTLRYTTTLENGSLVVCERSLSGSGAGPNAAAAHQFVR 309

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H+ +    V  + + L  +      +  +A L R  
Sbjct: 310 AEMLPSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVLRPLYESSKVVAQRMTIAAL-RYV 368

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK-SMLK-LAERMVISFCAGVSASTAHTWTTLSGTG 557
            ++A   +  +  G         GR+ ++L+  ++R+   F   V+      W+ L+  G
Sbjct: 369 RQIAQETSGEVVYGL--------GRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSVLNCDG 420

Query: 558 ADDV--RVMTRKSVDDPGRPP-------GIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
           A+DV   V + K++     P        G++ + A+     +PP  +  FLR+   RSEW
Sbjct: 421 AEDVIISVNSTKNLSGTSNPASSLTFAGGVLCAKASMLLQNIPPAVLVRFLREH--RSEW 478

Query: 609 DILS----NGGVVQEMAHIANG----RDTGNCV-----------SLLRVNCLQSANSSQS 649
              +    +   ++  ++   G    R TGN +            +L V  L+  + +Q 
Sbjct: 479 ADFNVDAYSAASLKAGSYAYPGMRPMRFTGNQIIMPLGHTIEHEEMLEVIRLEGHSLAQE 538

Query: 650 NMLI-----LQESCTDPTASFV------IYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL 698
           +        L + C+      V      I+AP+D +          PD   L+PSGF I+
Sbjct: 539 DAFASRDVHLLQLCSGIDEDAVGACCELIFAPIDEMF---------PDDAPLVPSGFRII 589

Query: 699 P 699
           P
Sbjct: 590 P 590


>gi|359478353|ref|XP_002285176.2| PREDICTED: homeobox-leucine zipper protein REVOLUTA [Vitis
           vinifera]
          Length = 843

 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 154/700 (22%), Positives = 261/700 (37%), Gaps = 173/700 (24%)

Query: 61  LREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQR 120
           + ++  +S+ SGS N    SG           +Y R+T  Q++ +E  + ECP P   +R
Sbjct: 5   IAQQHRESSSSGSINKHLDSG-----------KYVRYTAEQVEALERVYLECPKPSSLRR 53

Query: 121 KELSREL----GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALS 176
           ++L RE      +EP Q+K WF         Q+ R    Q R E  +L+  N +      
Sbjct: 54  QQLIRECPILSNIEPKQIKVWF---------QNRRCREKQ-RKEASRLQTVNRK------ 97

Query: 177 NASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVP 236
                                 L   N  L EE DR+    ++ V +             
Sbjct: 98  ----------------------LTAMNKLLMEENDRLQKQVSQLVCE------------- 122

Query: 237 SRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEE------L 290
                              G M      L+++SA T+A    ++     ++ +      L
Sbjct: 123 ------------------NGYMR---QQLQTVSATTDASCESVVTTPQHSLRDANNPAGL 161

Query: 291 IRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHI 348
           + +A+     +++   GTA    +   ++  P  +G       C   A+R   +V +   
Sbjct: 162 LSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISHSCSGVAARACGLVSLEPS 221

Query: 349 SLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRES 408
            + EIL D   W            +LEV +   AGN  G ++++  +   P+ L P R+ 
Sbjct: 222 KIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-GGTVELLYTQIYAPTTLAPARDF 273

Query: 409 YYVRYCKQHGEGTWAVVDVSLDNLRPSP-------AVRCRRRPSGCLIQEMPNGYSKVTW 461
           + +RY      G+  V + SL      P        VR    PSG LI+    G S +  
Sbjct: 274 WTLRYTTSLDNGSLVVCERSLSGSGAGPNTAAAAQFVRAEMLPSGYLIRPCEGGGSIIHI 333

Query: 462 VEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQ 521
           V+H+ ++   V  + + L  +      K  +A L R   ++A   +  +  G        
Sbjct: 334 VDHLNLEAWSVPEVLRPLYESSRVVAQKMTIAAL-RYIRQIAQETSGEVVYGL------- 385

Query: 522 DGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV--RVMTRKSVDDPGRP-- 575
            GR+   +   ++R+   F   ++      W+ +S  GA+DV   V + K+++    P  
Sbjct: 386 -GRQPAVLRTFSQRLSRGFNDAINGFNDDGWSLMSCDGAEDVIIAVNSTKNLNTTSNPAN 444

Query: 576 ----PGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEWDILS------------------ 612
               PG VL A  S  L  VPP  +  FLR+   RSEW   S                  
Sbjct: 445 SLSLPGGVLCAKASMLLQNVPPAVLVRFLREH--RSEWADFSVDAYSAASLKASPYSYPG 502

Query: 613 -------NGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCT--DPTA 663
                     ++  + H     +    +  L  + L   ++  S  + L + C+  D  A
Sbjct: 503 MRPTRFTGSQIIMPLGHTIEHEELLEVIR-LEGHSLAHEDAFMSRDIHLLQICSGVDENA 561

Query: 664 ----SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 699
               S +++AP+D +          PD   LLPSGF I+P
Sbjct: 562 VGACSELVFAPIDEMF---------PDDAPLLPSGFRIIP 592


>gi|357503629|ref|XP_003622103.1| Homeobox-leucine zipper protein ROC8 [Medicago truncatula]
 gi|355497118|gb|AES78321.1| Homeobox-leucine zipper protein ROC8 [Medicago truncatula]
          Length = 118

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/123 (49%), Positives = 77/123 (62%), Gaps = 20/123 (16%)

Query: 651 MLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDG----TSLHG 706
           MLILQESC D + S V+  PVD   M+ V    DP Y+ LLPSGF I  DG     ++ G
Sbjct: 1   MLILQESCVDSSGSLVVSCPVDSSIMSEV----DPSYIQLLPSGFIITSDGKQNENNIQG 56

Query: 707 ANIG--EAAS-------GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKAS 757
            N G  + AS       GGSLLTVAFQI+V+S+P+   ++ SV  VN LI  TVE+IKA+
Sbjct: 57  GNSGNDDVASTSSNTNIGGSLLTVAFQIMVNSLPS---NMESVPVVNGLICKTVEQIKAA 113

Query: 758 LSC 760
           L+C
Sbjct: 114 LNC 116


>gi|168020051|ref|XP_001762557.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686290|gb|EDQ72680.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 873

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 177/764 (23%), Positives = 305/764 (39%), Gaps = 156/764 (20%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R +L +E      +EP Q+K WFQN+R + K  
Sbjct: 6   KYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK-- 63

Query: 149 HERHENTQLRTENEKLRADN---MRYREALSNASCPNCGGPTAIGEMSFDEHHLR--LEN 203
            +R E ++L + N KL A N   M   E L+  +           +++ + H LR  L  
Sbjct: 64  -QRKEASRLVSVNAKLTALNKLLMEENERLAKHT----------SQLTLENHALRQQLPG 112

Query: 204 ARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGG---EMYG 260
             L +   R+S+ A   +   +               E AV N G +    GG    ++G
Sbjct: 113 LPLTDGRHRLSSQATSVLQNALKK-------------EGAV-NGGDESSTQGGICVRIHG 158

Query: 261 AADLLRSISAPTEADKPMIIELAVAAMEE----------LIRMAQMGEPLWMTSLDGTAA 310
            A +    S  T  D  +   L      +          L+ +A+     ++    GTA 
Sbjct: 159 QAGV---ASTDTSCDSAVTGGLPHRLTPQHSPRDTSPAGLLAIAEETLTDFLAKATGTAV 215

Query: 311 VLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIV 368
              +   ++  P  IG       C   A+R   +V ++   + E+L D   W        
Sbjct: 216 DWIQLPGMKPGPDAIGIIAISHGCVGIAARACGLVALDASKVTEVLKDRPAWQ------- 268

Query: 369 SRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS 428
                +EVL      N  G ++++  +   P+ L   R+   +RY     +G   + + S
Sbjct: 269 QDCRRMEVLGVLPTAN-GGTIELLYTQMYAPTTLASARDYCTLRYTTILEDGNLVICERS 327

Query: 429 L---DNLRPSPAVRCRRR----PSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVS 481
           L    N  P P V+   R    PSG LI+    G   +  V+H + +   V  + + L  
Sbjct: 328 LIGGQNGPPMPPVQSFVRGEMFPSGYLIRPSDGGGCIIHVVDHYDNERWSVPEVLRPLYE 387

Query: 482 TGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSML--KLAERMVISFC 539
           +      +  +A L R   RLAS         E G    ++G+  ++   L++R+   F 
Sbjct: 388 SPAVLAQRSTIAAL-RHLRRLAS--------EESGEGNPRNGQHPVVLRTLSQRLAKGFK 438

Query: 540 AGVSASTAHTWTTLSGTGADDVRVM---TRKSVDDP--------GRPPGIVLSAATSFWL 588
             V+      W +    G +DV VM   T KS++              GI+ + A+    
Sbjct: 439 NAVNGFGDDGWVSTVSDGLEDVSVMLNATPKSMEGQIASDKLLYSLGGGILCAKASMLLQ 498

Query: 589 PVPPKRVFDFLRDENTRSEW---DILSN---------------GGV--VQEMAHIANGRD 628
            V P  +  FLR+   RSEW   DI +N               GGV  VQ    +A+  +
Sbjct: 499 NVSPSLLIGFLREH--RSEWADFDIDANVATSFRSNGNSYARGGGVSHVQLPLPLAHSGE 556

Query: 629 TGNCVSLLRV---NCLQSANSSQSNMLILQESCTDPTA----SFVIYAPVDIVAMNVVLN 681
            G  + ++++   + +Q    S+ + L+   S  D  A    + +I+APVD+        
Sbjct: 557 HGEILEVVKLEGHSSVQHMVLSRDSFLLQLCSGIDENAVGASAQLIFAPVDVALA----- 611

Query: 682 GGDPDYVALLPSGFAILP-DGTSLHGANI-------------------GEAASGG----- 716
               + + LLPSGF + P D + + G ++                   G+  S G     
Sbjct: 612 ----EDIPLLPSGFCVSPIDASVVGGFDLDRTLDLASTLEGGSDLRLNGDTKSNGTSGQM 667

Query: 717 -SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
            S+LT+AFQ   +       ++ +   V  ++A +V+R+  +L+
Sbjct: 668 RSVLTIAFQFAYEVHTRETCAVMARQYVRTVVA-SVQRVAMALA 710


>gi|359483942|ref|XP_003633040.1| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 2
           [Vitis vinifera]
          Length = 859

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 170/772 (22%), Positives = 286/772 (37%), Gaps = 200/772 (25%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTPEQVEALERVYSECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEK-------LRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRL 201
            +R E ++L+T N K       L  +N R ++ +S                      L  
Sbjct: 75  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS---------------------QLVY 112

Query: 202 ENARLREEIDRISAIAAKYVGKPVV---NYPLLSPPVPSRPLELAVGNFGAQPGIGGGEM 258
           EN  +R+++   S        + VV    +     P P  P   A    G          
Sbjct: 113 ENGYMRQQLQSASTATTDTSCESVVMSGQHQQQQNPTPQHPQRDASNPAG---------- 162

Query: 259 YGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYV 318
                 L +I+  T A+                         +++   GTA    +   +
Sbjct: 163 ------LLAIAEETLAE-------------------------FLSKATGTAVDWVQMIGM 191

Query: 319 RTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEV 376
           +  P  IG       C   A+R   +V +    + EIL D   W             L+V
Sbjct: 192 KPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSW-------FRDCRCLDV 244

Query: 377 LSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP 436
           LS    GN  G ++++  +   P+ L   R+ + +RY     +G+  + + SL +    P
Sbjct: 245 LSVIPTGN-GGTIELIYMQTYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTSSTGGP 303

Query: 437 A-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAK 489
                   +R    PSG LI+    G S +  V+HV++D   V  + + L  +      K
Sbjct: 304 TGPPASSYIRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQK 363

Query: 490 RWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTA 547
             VA L R   ++A   +  I  G         GR+   +   ++R+   F   V+    
Sbjct: 364 TTVAAL-RHIRQIAQETSGEIQYG--------GGRQPAVLRTFSQRLCRGFNDAVNGFAD 414

Query: 548 HTWTTLSGTGADDVRVMTRKSVDDPGRPP----------GIVLSAATSFWLP-------- 589
             W+ +   G +DV ++   S      P           G VL A  S  L         
Sbjct: 415 DGWSLMGSDGVEDVTIVINSSPSKFLGPQYNSTMFPTFGGGVLCAKASMLLQVHRKSRQP 474

Query: 590 -------VPPKRVFDFLRDENTRSEW-----DILSN---------------GG-----VV 617
                  VPP  +  FLR+   RSEW     D  S                GG     V+
Sbjct: 475 CYLNLQNVPPALLVRFLREH--RSEWADYGVDAYSAACLKASPYEVPCARPGGFPSSQVI 532

Query: 618 QEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCT--DPTA----SFVIYAPV 671
             +AH     +    V  L  +     + + +  + L + C+  D  A    + +++AP+
Sbjct: 533 LPLAHTVEHEEFLEVVR-LEGHAFSPEDVALTRDMYLLQLCSGVDENAAGACAQLVFAPI 591

Query: 672 DIVAMNVVLNGGDPDYVALLPSGFAILP-----DG----TSLHGANIGEAASGG------ 716
           D             D   LLPSGF ++P     DG     +L  A+  E  +GG      
Sbjct: 592 D---------ESFADDAPLLPSGFRVIPLDPKTDGPAATRTLDLASTLEVGAGGARPANE 642

Query: 717 ---------SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
                    S+LT+AFQ   ++     ++  +   V +++A +V+R+  +++
Sbjct: 643 SDLNNYNLRSVLTIAFQFTFENHVRDNVAAMARQYVRSVMA-SVQRVAMAIA 693


>gi|89514871|gb|ABD75310.1| class III homeodomain-leucine zipper protein C3HDZ2 [Pseudotsuga
           menziesii]
          Length = 839

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 160/747 (21%), Positives = 272/747 (36%), Gaps = 168/747 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                  +      L  EN   R+
Sbjct: 75  -QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSQLVYENGYFRQ 119

Query: 209 EIDRISAIAAKYVGKPVVNY-PLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
           +I  +S        + VV   P      P  P                            
Sbjct: 120 QIQTVSIATTDTSCESVVTSGPHQHHLTPQHP---------------------------- 151

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
              P +A+    + +A   + + +  A      W+  + G          ++  P  IG 
Sbjct: 152 ---PRDANPAGFLSIAEETLTQFLSKATETAVDWI-QMPG----------MKPGPDSIGI 197

Query: 328 KPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                 C   A+R      +    + +IL D   W       +     L+VL+    G  
Sbjct: 198 VTISNSCTGIAARACGFAGLEPSKVADILKDRPAW-------LHDCRCLDVLTAFPTGK- 249

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP-------AV 438
            G ++++  +   P+ L P R+ + +RY     +G+  V + SL   +  P        V
Sbjct: 250 GGTIELLYTQMYAPTTLAPARDLWTLRYTSLLEDGSLVVCERSLTGTQSGPNMPSVQHFV 309

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R +  PSG LI+    G   +  V+H++++   V  + + L  +      K  +  L R 
Sbjct: 310 RAQMLPSGYLIRPCEGGGCIIHIVDHMDLEPWTVPEVIRPLYESSAVLAQKMTITAL-RH 368

Query: 499 CERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGT 556
             ++A  ++  +  G         GR+  ++   ++R+   F   V+      W+ L   
Sbjct: 369 LRQVAQEVSGEVVLGW--------GRQPAALRAFSQRLCRGFNDAVNGFVDDGWSLLGSD 420

Query: 557 GADDVRVMTRK-----------SVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENT 604
           G +DV +               S D      G +L A  S  L  VPP     FLR+   
Sbjct: 421 GVEDVIIAINSTPNKLLGSQLASSDGLSALNGGILCAKASMLLQNVPPALPVRFLREH-- 478

Query: 605 RSEW-----DILSN--------------GG-----VVQEMAHIANGRDTGNCVSLLRVNC 640
           RSEW     D  S+              GG     V+  +AH     +    + L     
Sbjct: 479 RSEWADCNIDAYSSATMKANAFNVPGSLGGITGSQVILPLAHTVEHEEFLEVIKLEGHGL 538

Query: 641 LQSANSSQSNMLILQ--ESCTDPTASF---VIYAPVDIVAMNVVLNGGDPDYVALLPSGF 695
                    +M +LQ      +  A F   + +AP+D             D   LLPSGF
Sbjct: 539 THEEALLSKDMFLLQLCSGIDEQAAGFCAQLAFAPID---------ASFADDAPLLPSGF 589

Query: 696 AILP---------------DGTSLHGANIGEAASGG--------SLLTVAFQILVDSVPT 732
            ++P                 ++L   + G  ASG         S+LT+AFQ    +   
Sbjct: 590 RVIPLESGSDTSPPNRTLDLASALEVGSAGARASGDCGDSPNLRSVLTIAFQFTYQNHVR 649

Query: 733 AKLSLGSVATVNNLIACTVERIKASLS 759
             ++  +   V ++IA +V+R+  +L+
Sbjct: 650 DNVASMARQYVRHVIA-SVQRVSVALA 675


>gi|90110452|gb|ABD90528.1| class III homeodomain-leucine zipper [Pseudotsuga menziesii]
          Length = 840

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 156/748 (20%), Positives = 272/748 (36%), Gaps = 169/748 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R   ++L+T N KL A N    E                  +      L  EN   R+
Sbjct: 75  -QRKGASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSQLVYENGYFRQ 119

Query: 209 EIDRISAIAAKYVGKPVVNY-PLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRS 267
           +I  +S        + VV   P      P  P                            
Sbjct: 120 QIQTVSIATTDTSCESVVTSGPHQHHLTPQHP---------------------------- 151

Query: 268 ISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
              P +A+    + +A   + + +  A      W+  + G          ++  P  IG 
Sbjct: 152 ---PRDANPAGFLSIAEETLTQFLSKATETAVDWI-QMPG----------MKPGPDSIGI 197

Query: 328 KPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                 C   A+R      +    + +IL D   W       +     L+VL+    G  
Sbjct: 198 VTISNSCTGIAARACGFAGLEPSKVADILKDRPAW-------LHDCRCLDVLTAFPTGK- 249

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP-------AV 438
            G ++++  +   P+ L P R+ + +RY     +G+  V + SL   +  P        V
Sbjct: 250 GGTIELLYTQMYAPTTLAPARDLWTLRYTSLLEDGSLVVCERSLTGTQSGPNMPSVQHFV 309

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R +  PSG LI+    G   +  V+H++++   V  + + L  +      K  +  L R 
Sbjct: 310 RAQMLPSGYLIRPCEGGGCIIHIVDHMDLEPWTVPEVIRPLYESSAVLAQKMTITAL-RH 368

Query: 499 CERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGT 556
             ++A  ++  +  G         GR+  ++   ++R+   F   V+      W+ L   
Sbjct: 369 LRQVAQEVSGEVVLGW--------GRQPAALRAFSQRLCRGFNDAVNGFVDDGWSLLGSD 420

Query: 557 GADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENT 604
           G +DV +    S +                  GI+ + A+     VPP  +  FLR+   
Sbjct: 421 GVEDVIIAINSSPNKLLGSQLASSDGLSALNGGILCAKASMLLQNVPPALLVRFLREH-- 478

Query: 605 RSEW-----DILSN--------------GG-----VVQEMAHIANGRDTGNCVSLLRVNC 640
           RSEW     D  S+              GG     V+  +AH     +    + L     
Sbjct: 479 RSEWADCNIDAYSSATMKANAFNVPGSLGGITGSQVILPLAHTVEHEEFLEVIKLEGHGL 538

Query: 641 LQSANSSQSNMLILQ--ESCTDPTASF---VIYAPVDIVAMNVVLNGGDPDYVALLPSGF 695
                    +M +LQ      +  A F   + +AP+D             D   LLPSGF
Sbjct: 539 THEEALLSKDMFLLQLCSGIDEQAAGFCAQLAFAPID---------ASFADDAPLLPSGF 589

Query: 696 AILP---------------DGTSLHGANIGEAASGG---------SLLTVAFQILVDSVP 731
            ++P                 ++L   + G  ASG          S+LT+AFQ    +  
Sbjct: 590 RVIPLESGSDTSPPNRTLDLASALEVGSAGARASGDCGDSPYNLRSVLTIAFQFTYQNHV 649

Query: 732 TAKLSLGSVATVNNLIACTVERIKASLS 759
              ++  +   V ++IA +V+R+  +L+
Sbjct: 650 RDNVASMARQYVRHVIA-SVQRVSVALA 676


>gi|414877305|tpg|DAA54436.1| TPA: hypothetical protein ZEAMMB73_882214 [Zea mays]
          Length = 685

 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 89/162 (54%), Gaps = 7/162 (4%)

Query: 264 LLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAV----LNEDEYVR 319
           +L ++      DK  I + A++AM EL++MAQ   PLW++++    ++    LN  E++ 
Sbjct: 468 MLTTLLQMVRIDKFQIAQFALSAMNELVQMAQRNRPLWVSTVPSLGSLIMETLNYKEHLV 527

Query: 320 TFPRGIGPKPTGFKCEASRETAVV-IMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLS 378
            F   +G KPTGF  E SRE  +V I +  +LV+  MD  +W  +F   V+    +E + 
Sbjct: 528 AFSPCVGVKPTGFMSEVSRELGIVTIGSSAALVKTFMDQRRWLDIFCCRVATTAAVEKI- 586

Query: 379 TGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEG 420
             VAG+ NGAL +M AE QV SPLV     ++ R  K H E 
Sbjct: 587 LPVAGSRNGALLLMHAELQVFSPLVKLLTDFFWRELK-HTEA 627


>gi|297793627|ref|XP_002864698.1| hypothetical protein ARALYDRAFT_496218 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310533|gb|EFH40957.1| hypothetical protein ARALYDRAFT_496218 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 844

 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 153/677 (22%), Positives = 254/677 (37%), Gaps = 148/677 (21%)

Query: 75  NHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGL----E 130
           NH   S D   +  +   +Y R+T  Q++ +E  + ECP P   +R++L RE  +    E
Sbjct: 7   NHRERSSDSMNRHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIE 66

Query: 131 PLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIG 190
           P Q+K WF         Q+ R  + Q R E  +L++ N +                    
Sbjct: 67  PKQIKVWF---------QNRRCRDKQ-RKEASRLQSVNRK-------------------- 96

Query: 191 EMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQ 250
                   L   N  L EE DR+    ++ V +       L+  V + P   +V      
Sbjct: 97  --------LSAMNKLLMEENDRLQKQVSQLVCENGYMKQQLTTVVCNDPSCESV------ 142

Query: 251 PGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAA 310
                  +      LR  S+P       +I +A   + E +  A            GTA 
Sbjct: 143 -------VTTPQHSLRDASSPAG-----LISIAEETLAEFLSKAT-----------GTAV 179

Query: 311 VLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIV 368
              +   ++  P  +G      +C   A+R   +V +  + + EIL D   W        
Sbjct: 180 DWVQMPGMKPGPDSVGIFAISQRCSGVAARACGLVSLEPMKIAEILKDRPSW-------F 232

Query: 369 SRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS 428
               +LEV +   AGN  G ++++  +   P+ L P R+ + +RY      G++ V + S
Sbjct: 233 RDCRSLEVFTLFPAGN-GGTIELVYMQTYAPTTLAPARDFWTLRYTTSLDNGSFVVCERS 291

Query: 429 LDNLRPSP-------AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVS 481
           L      P        VR     SG LI+    G S +  V+H+ ++   V ++ + L  
Sbjct: 292 LSGSGAGPNAASASQFVRAEMLSSGYLIRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYE 351

Query: 482 TGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFC 539
           +      K  ++ L R   +LA    TN      G +    GR+   +   ++R+   F 
Sbjct: 352 SSKVVAQKMTISAL-RYIRQLAQ--ETN------GEVVYGLGRQPAVLRTFSQRLSRGFN 402

Query: 540 AGVSASTAHTWTTLSGTGADDVRVMTRKS-----VDDPGRPPGIVLSAATSFWLP-VPPK 593
             V+      W+T+   GA+D+ V    +     + +     G VL A  S  L  VPP 
Sbjct: 403 DAVNGFGDDGWSTMHCDGAEDIIVAINSTKHLNNISNSLSFLGGVLCAKASMLLQNVPPA 462

Query: 594 RVFDFLRDENTRSEW-DI------------------------LSNGGVVQEMAHIANGRD 628
            +  FLR+   RSEW D                          +   ++  + H     +
Sbjct: 463 VLIRFLREH--RSEWADFNVDAYSAATLKAGTFAYPGMRPTRFTGSQIIMPLGHTIEHEE 520

Query: 629 TGNCVSLLRVNCLQSANSSQSNMLILQESCT--DPTA----SFVIYAPVDIVAMNVVLNG 682
               V  L  + L   ++  S  + L + CT  D  A    S +I+AP+         N 
Sbjct: 521 MLEVVR-LEGHSLAQEDAFMSRDVHLLQICTGIDENAVGACSELIFAPI---------NE 570

Query: 683 GDPDYVALLPSGFAILP 699
             PD   L+PSGF ++P
Sbjct: 571 MFPDDAPLVPSGFRVIP 587


>gi|326505494|dbj|BAJ95418.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 867

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 122/545 (22%), Positives = 211/545 (38%), Gaps = 105/545 (19%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q+  +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 41  KYVRYTPEQVDALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 99

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E  +L+  N +                            L   N  L E
Sbjct: 100 ---------RKEASRLQTVNRK----------------------------LSAMNKLLME 122

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           E DR+    ++ V +       LS P       +A  +   +  +  G+     + +  +
Sbjct: 123 ENDRLQKQVSRLVYENGYMRTHLSNP------SVATTDTSCESVVTSGQHQQQQNAV--V 174

Query: 269 SAPT-EADKPM-IIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIG 326
             P  +A+ P  ++ +A   + E +  A            GTA    +   ++  P  IG
Sbjct: 175 PRPQRDANNPAGLLAIAEETLAEFLSKAT-----------GTAVDWVQMVGMKPGPDSIG 223

Query: 327 PKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGN 384
                  C   A+R   +V +    + EIL D   W             ++VL     GN
Sbjct: 224 IIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSW-------YRDCRCVDVLQIIPTGN 276

Query: 385 YNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA------- 437
             G ++++  +   P+ L   R+ + +RY     +G+  + + SL      P+       
Sbjct: 277 -GGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQATGGPSGPNTPNF 335

Query: 438 VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDR 497
           VR    PSG LI+    G S +  V+HV++D   V  + + L  +      K  +A L R
Sbjct: 336 VRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAAL-R 394

Query: 498 QCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSG 555
              ++A   +  +P G         GR+   +   ++R+   F   V+      W+ +S 
Sbjct: 395 HIRQIAHESSGEMPYG--------GGRQPAVLRTFSQRLSRGFNDAVNGFLDDGWSLMSS 446

Query: 556 TGADDVRVMTRKSVD-------DPGR-----PPGIVLSAATSFWLPVPPKRVFDFLRDEN 603
            GA+DV +    S +       +P +       G++ + A+     VPP  +  FLR+  
Sbjct: 447 DGAEDVTIAINSSPNKLAGTHVNPSQMFSAIGGGVLCAKASMLLQNVPPALLVRFLREH- 505

Query: 604 TRSEW 608
            RSEW
Sbjct: 506 -RSEW 509


>gi|109729909|tpg|DAA05768.1| TPA_inf: class III HD-Zip protein CNA2 [Medicago truncatula]
          Length = 518

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 116/543 (21%), Positives = 213/543 (39%), Gaps = 110/543 (20%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 15  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPRQIKVWFQNRRCREKQ- 73

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E+ +L+  N +                TA+ ++  +E      N RL++
Sbjct: 74  ---------RKESFRLQGVNRKL---------------TAMNKLLMEE------NDRLQK 103

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++  +      Y  +   N               A  +      +  G+       + S 
Sbjct: 104 QVSHL-VYENGYFRQNTQN---------------ATKDTSCDSVVTSGQHN-----MTSQ 142

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 143 HPPRDASPAGLLSIAEETLAEFLSKAT-----------GTAVEWVQMPGMKPGPDSIGIV 191

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W             +++++     N  
Sbjct: 192 AISHGCTGVAARACGLVGLEPTRVAEILKDRPLW-------FRDCRAVDIVNVLPTAN-G 243

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +   P+ L P R+ + +RY     +G+  + + SL N +  P+       VR
Sbjct: 244 GTIELLYMQLYAPTTLAPARDFWLLRYTSVVEDGS-LICERSLKNTQNGPSMPPVPHFVR 302

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L R  
Sbjct: 303 ADMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESPMVLAQKTTMAAL-RHL 361

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            +++  ++    TG         GR+  ++  L++R+   F   ++  T   WT +   G
Sbjct: 362 RQISHEVSQPNVTGW--------GRRPAALRALSQRLSRGFNEALNGFTDEGWTMMGNDG 413

Query: 558 ADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
            DDV ++   S D             P     ++ + A+     VPP  +  FLR+   R
Sbjct: 414 VDDVTILVNSSPDKLMGLNLSFGNGFPSVSNAVLCAKASMLLQNVPPAILLRFLREH--R 471

Query: 606 SEW 608
           SEW
Sbjct: 472 SEW 474


>gi|226502384|ref|NP_001142394.1| uncharacterized protein LOC100274567 [Zea mays]
 gi|224030609|gb|ACN34380.1| unknown [Zea mays]
 gi|323388783|gb|ADX60196.1| HB homeobox transcription factor [Zea mays]
          Length = 854

 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 124/544 (22%), Positives = 209/544 (38%), Gaps = 101/544 (18%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R+ L R+      +EP Q+K WFQN+R + K  
Sbjct: 22  KYVRYTPEQVEALERVYSECPKPSSLRRQHLIRDCPILRNIEPKQIKVWFQNRRCREK-- 79

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E+++L+T N KL A N    E                            EN RL++
Sbjct: 80  -QRKESSRLQTVNRKLSAMNKLLME----------------------------ENDRLQK 110

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ R+            +   L SP V       A  +   +  +  G+     +   ++
Sbjct: 111 QVSRL------VFDNGYMKNRLHSPSV-------ATTDTSCESVVTSGQHNQQQN--PAV 155

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P + D      L   A E L          +M+   GTA    +   ++  P  +G  
Sbjct: 156 LHPPQRDANNPAGLLAIAEETLAE--------FMSKATGTAVNWVQMVGMKPGPDSVGII 207

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W             ++VL     GN  
Sbjct: 208 AVSHNCSGVAARACGLVSLEPTKVAEILKDRASW-------YRDCRHVDVLHVIPTGN-G 259

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +    + L   R+ + +RY     +G+  + + SL      P+       +R
Sbjct: 260 GTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSLVICERSLTQSTGGPSGPNTPNFIR 319

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+HV ++   V  + + L  +      K   A L R  
Sbjct: 320 AEVLPSGYLIRPCDGGGSMIYIVDHVNLNACSVPEVLRPLYESPKILAQKMTAAAL-RHI 378

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGT- 556
            ++A   +  +P G         GR+   +   ++R+   F   VS      W+ L  T 
Sbjct: 379 RQIAHESSGEMPYGA--------GRQPAVLRTFSQRLSRGFNDAVSGFPDDGWSCLLNTD 430

Query: 557 GADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENT 604
           GA+D+ V    S +                  GI+ + A+     VPP  +  FLR+   
Sbjct: 431 GAEDITVTINSSPNKLVGSHVSASPLFSAMGGGIMCAKASMLLQNVPPALLVRFLREH-- 488

Query: 605 RSEW 608
           RSEW
Sbjct: 489 RSEW 492


>gi|414877999|tpg|DAA55130.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 953

 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 124/544 (22%), Positives = 209/544 (38%), Gaps = 101/544 (18%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R+ L R+      +EP Q+K WFQN+R + K  
Sbjct: 121 KYVRYTPEQVEALERVYSECPKPSSLRRQHLIRDCPILRNIEPKQIKVWFQNRRCREK-- 178

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E+++L+T N KL A N    E                            EN RL++
Sbjct: 179 -QRKESSRLQTVNRKLSAMNKLLME----------------------------ENDRLQK 209

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ R+            +   L SP V       A  +   +  +  G+     +   ++
Sbjct: 210 QVSRL------VFDNGYMKNRLHSPSV-------ATTDTSCESVVTSGQHNQQQN--PAV 254

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P + D      L   A E L          +M+   GTA    +   ++  P  +G  
Sbjct: 255 LHPPQRDANNPAGLLAIAEETLAE--------FMSKATGTAVNWVQMVGMKPGPDSVGII 306

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W             ++VL     GN  
Sbjct: 307 AVSHNCSGVAARACGLVSLEPTKVAEILKDRASW-------YRDCRHVDVLHVIPTGN-G 358

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +    + L   R+ + +RY     +G+  + + SL      P+       +R
Sbjct: 359 GTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSLVICERSLTQSTGGPSGPNTPNFIR 418

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+HV ++   V  + + L  +      K   A L R  
Sbjct: 419 AEVLPSGYLIRPCDGGGSMIYIVDHVNLNACSVPEVLRPLYESPKILAQKMTAAAL-RHI 477

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGT- 556
            ++A   +  +P G         GR+   +   ++R+   F   VS      W+ L  T 
Sbjct: 478 RQIAHESSGEMPYGA--------GRQPAVLRTFSQRLSRGFNDAVSGFPDDGWSCLLNTD 529

Query: 557 GADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENT 604
           GA+D+ V    S +                  GI+ + A+     VPP  +  FLR+   
Sbjct: 530 GAEDITVTINSSPNKLVGSHVSASPLFSAMGGGIMCAKASMLLQNVPPALLVRFLREH-- 587

Query: 605 RSEW 608
           RSEW
Sbjct: 588 RSEW 591


>gi|158252034|gb|ABW24026.1| class III HD-Zip protein 8 [Eucommia ulmoides]
          Length = 533

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 145/624 (23%), Positives = 238/624 (38%), Gaps = 146/624 (23%)

Query: 130 EPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAI 189
           EP Q+K WFQN+R + K   +R E ++LR  N KL A N    E                
Sbjct: 1   EPKQIKVWFQNRRCREK---QRKEASRLRAVNRKLTAMNKLLME---------------- 41

Query: 190 GEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGA 249
                       EN RL++++ ++      Y  +   N              LA  +   
Sbjct: 42  ------------ENDRLQKQVSQL-VYENSYFRQQTQNA------------TLATTDTSC 76

Query: 250 QPGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTA 309
           +  +  G+         +   P +A    ++ +A   + E +  A            GTA
Sbjct: 77  ESVVTSGQHQ------LTQHPPRDASPAGLMSIAEETLTEFLSKA-----------TGTA 119

Query: 310 AVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGI 367
               +   ++  P  IG       C   ASR   +V +    + +IL D   W   F   
Sbjct: 120 VEWVQMPGMKPGPDSIGIIAISHGCTGVASRACGLVGLEPSRVADILKDRLSW---FRD- 175

Query: 368 VSRAM-TLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVD 426
             RA+  L VLST       G ++++  +   P+ L P R+ + +RY     +G+  V +
Sbjct: 176 -CRAVNVLNVLSTA----NGGTIELIYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCE 230

Query: 427 VSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQL 479
            SL+N +  P+       VR    PSG LI+    G S +  V+H++++   V  + + L
Sbjct: 231 RSLNNTQNGPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPL 290

Query: 480 VSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISF 538
             +      +  +A L RQ  +++  ++         V+ N   R + L+ L++R+   F
Sbjct: 291 YESSTLLSQRTTMAAL-RQLRQISQEVSQ-------PVVANWGRRPAALRALSQRLSKGF 342

Query: 539 CAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRP-----------PGI--VLSAATS 585
              V+  T   W+ +   G DDV V+   S   PG+            P +  VL A  S
Sbjct: 343 NEAVNGFTDEGWSMIESDGIDDVTVLVNSS---PGKMMSGDLSYTNGFPSVNAVLCAKAS 399

Query: 586 FWLP-VPPKRVFDFLRDENTRSEW-----DILS-------------------NGGVVQEM 620
             L  VPP  +  FLR+   RSEW     D  S                    G V+  +
Sbjct: 400 MLLQNVPPAILLRFLREH--RSEWADSGIDSYSASAVKAVPCCLPVSRAGYFGGQVILPL 457

Query: 621 AHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQ-----ESCTDPTASFVIYAPVDIVA 675
           AH     +    + L  +   Q      +++ +LQ     +  +  T   +I+AP+D   
Sbjct: 458 AHTIEHEEFMEVIKLENMAHFQEDMIMANDIFLLQLCSGVDEKSIGTCVELIFAPID--- 514

Query: 676 MNVVLNGGDPDYVALLPSGFAILP 699
                     D   LLPSGF I+P
Sbjct: 515 ------ASFSDNAPLLPSGFRIIP 532


>gi|147772902|emb|CAN69075.1| hypothetical protein VITISV_007225 [Vitis vinifera]
          Length = 141

 Score = 90.5 bits (223), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 5/90 (5%)

Query: 51  QNTSESEIARLREEEFDSTKSGSENHEGASGDDQE----QRPNKKKRYHRHTQHQIQEME 106
           +N   S + R+ E+ ++S  SGS N +    D+QE    +RP KK +YHRHTQ QI E+E
Sbjct: 53  ENFDSSVMGRINEDGYESM-SGSGNLDCRLEDEQETLVLERPAKKLKYHRHTQEQINELE 111

Query: 107 AFFKECPHPDDKQRKELSRELGLEPLQVKF 136
             FKE PHPDDKQR +LSR+L LEP QVKF
Sbjct: 112 TGFKEWPHPDDKQRLDLSRKLNLEPRQVKF 141


>gi|37790341|gb|AAR03322.1| homeodomain protein AHDP [Arabidopsis suecica]
 gi|37790343|gb|AAR03323.1| homeodomain protein AHDP [Arabidopsis suecica]
 gi|37790345|gb|AAR03324.1| homeodomain protein AHDP [Arabidopsis suecica]
 gi|37790347|gb|AAR03325.1| homeodomain protein AHDP [Arabidopsis suecica]
          Length = 95

 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/81 (53%), Positives = 59/81 (72%), Gaps = 3/81 (3%)

Query: 276 KPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE 335
           K +++ELA+ AM+EL+++AQ  EPLW+ SLDG    LN+DEY+RTF      KPTG   E
Sbjct: 17  KSVLLELALTAMDELVKLAQSEEPLWVKSLDGERDELNQDEYMRTFS---STKPTGLATE 73

Query: 336 ASRETAVVIMNHISLVEILMD 356
           ASR + +VI+N ++LVE LMD
Sbjct: 74  ASRTSGMVIINSLALVETLMD 94


>gi|109729912|tpg|DAA05770.1| TPA_inf: class III HD-Zip III protein HB8 [Zea mays]
 gi|413947684|gb|AFW80333.1| putative homeobox/bZIP/lipid-binding protein family [Zea mays]
          Length = 858

 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 149/665 (22%), Positives = 260/665 (39%), Gaps = 141/665 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L R+      ++P Q+K WFQN+R + K  
Sbjct: 18  KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRDCPVLASVDPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E+++L+  N KL A N    E                            EN RL++
Sbjct: 76  -QRKESSRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 106

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y  +             ++   LA  +   +  +  G    AA L ++ 
Sbjct: 107 QVSQLVYENGYYRQQ-------------TQSAGLATTDTSCESVVTSGPQNVAAVLPQA- 152

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 153 -QPRDAGPAGLMSIAEETLTEFLSKAT-----------GTAVEWVQMPGMKPGPDSIGII 200

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V M    + E+L D   W       +    ++EV++   AG  +
Sbjct: 201 AISHGCPGVAARACGLVGMEPAKVAEVLKDRPLW-------LRDCRSMEVVNVLPAGT-S 252

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL--DNLRPS-----PAVR 439
           G ++++  +   P+ L P R+ + +RY     +G+  V + SL  +   PS     P VR
Sbjct: 253 GTVELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLVVCERSLGANQGGPSMPLVQPFVR 312

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG L++    G S +  V+H++++   V  + + L  +      K  +A L R  
Sbjct: 313 GEMLPSGFLVRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKMSMAAL-RYL 371

Query: 500 ERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTG 557
            ++A     +       V+T   GR+  S+  L++++   F   ++      W+ +   G
Sbjct: 372 RQVAHEDTAH------SVVTGGWGRQPASLRALSQKLTRGFNEALNGLADDGWSVVGSDG 425

Query: 558 ADDVRVMTRKSV-----------DDP--GRPPGIVLSAATSFWLP-VPPKRVFDFLRDEN 603
            DDV V    S            + P  G     VL A  S  L  V P  +  F+R++ 
Sbjct: 426 VDDVCVSVSSSPSRVVSCNATFSNGPVVGTGSSSVLCAKASMLLQDVSPPELLRFMREQ- 484

Query: 604 TRSEW---------------DILS----------NGGVVQEMAHIANGRDTGNCVSLLRV 638
            RS+W               D  S           G V+  +AH  +  +    + +   
Sbjct: 485 -RSQWADSNLDAFFASAMKPDFCSLPIPPRLGGFGGQVILPLAHTFDPEEFLEVIKVGNA 543

Query: 639 NCLQSANSSQSNMLILQESCTDP----TASFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
              Q A   +   L+   +  D     T S +I+AP+D             D   LLPSG
Sbjct: 544 GNYQDALLHRDLFLLQMYNGVDENMAGTCSELIFAPID---------ASFSDDSPLLPSG 594

Query: 695 FAILP 699
           F I+P
Sbjct: 595 FRIIP 599


>gi|356528394|ref|XP_003532788.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Glycine max]
          Length = 849

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 161/748 (21%), Positives = 278/748 (37%), Gaps = 166/748 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGL----EPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R+++ RE  L    E  Q+K WFQN+R + K  
Sbjct: 21  KYVRYTPEQVEALERVYIECPKPSSSRRQQIIRECPLLANIETKQIKVWFQNRRCREKQ- 79

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E  +L+  N +                            L   N  L E
Sbjct: 80  ---------RKEASRLQTVNRK----------------------------LSAMNKLLME 102

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           E DR+     K V + V +   +   + +        N      + G   +        I
Sbjct: 103 ENDRLQ----KQVSQLVYDNGFMKQQIHTASATTTTDNSCESVVVSGQRQHQNP----KI 154

Query: 269 SAPT-EADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGP 327
             P  +A+ P            L+ +AQ     +++   GTA    +   ++  P  IG 
Sbjct: 155 QHPQWDANNP----------AGLLAIAQETLAAFLSKATGTAVNWVQMIGMKPGPDSIGI 204

Query: 328 KPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 385
                 C   A+R   +V +    + EIL D   W             L VLS    GN 
Sbjct: 205 VAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSW-------YRDCRCLNVLSVIPTGN- 256

Query: 386 NGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------V 438
            G +++M  +   P+ L   R+ + +RY     +G+  + + SL +    P        V
Sbjct: 257 GGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPAASNFV 316

Query: 439 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQ 498
           R    PSG LI+    G S V  V+HV++D   V  + + L  +      K   A L R 
Sbjct: 317 RAEMLPSGYLIRSCEGGGSIVHIVDHVDLDVWSVPEVLRPLYESPKFLAQKLTTAAL-RN 375

Query: 499 CERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGT 556
             ++A   +  +  G         GR+   +   ++R+   F   V+      W+ +   
Sbjct: 376 VRQIAQESSGEVQYG--------GGRQPAVLRTFSQRLCKGFNDAVNGFVDDGWSLMGND 427

Query: 557 GADDVRVMTRKSVDD-----------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
           G +DV +    S +            P    G++ + A+     VPP  +  FLR+   R
Sbjct: 428 GVEDVTIGINSSPNKFFSSHYNTSMLPAFGGGVLCAKASMLLQNVPPALLVRFLREH--R 485

Query: 606 SEW-----DILSNGGVVQEMAHIANGRDTG-----------------NCVSLLRV--NCL 641
           SEW     D  S+  +      +   R +G                   + ++R+  N  
Sbjct: 486 SEWANYGVDAYSSACLKASPYAVPCARPSGFPSSHVIIPLAHTIEHEEFLEVVRIEGNAF 545

Query: 642 QSANSSQSNMLILQESCT--DPTA----SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGF 695
              + + +  + L + C+  D  A    + +++AP+D             D   LLPSGF
Sbjct: 546 PPDDVALACDMYLMQLCSGIDENAIGACAQLVFAPID---------ESFADDALLLPSGF 596

Query: 696 AILP-----DG----TSLHGANIGEAASGG---------------SLLTVAFQILVDSVP 731
            I+P     DG     +L  A+  E  SG                S+LT+AFQ   ++  
Sbjct: 597 RIIPLDPKTDGPASTRTLDLASTLETGSGNARSAGESDLNNYNLRSVLTIAFQFTFENHL 656

Query: 732 TAKLSLGSVATVNNLIACTVERIKASLS 759
              +++ +   V N++  +V+R+  +++
Sbjct: 657 RDNVAVMARQYVRNVVR-SVQRVAMAIA 683


>gi|357120582|ref|XP_003562005.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Brachypodium
           distachyon]
          Length = 861

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 158/715 (22%), Positives = 260/715 (36%), Gaps = 167/715 (23%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q+  +E  + ECP P   +R++L RE      +EP Q+K WFQN        
Sbjct: 35  KYVRYTPEQVDALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN-------- 86

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
             R    + R E  +L+  N +                            L   N  L E
Sbjct: 87  --RRCREKQRKEASRLQTVNRK----------------------------LSAMNKLLME 116

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           E DR+    ++ V +       LS P       +A  +   +  +  G+     +   ++
Sbjct: 117 ENDRLQKQVSRLVYENGYMRTHLSNP------SVATTDTSCESVVTSGQHQQQQN--PAV 168

Query: 269 SAPT-EADKPM-IIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIG 326
             P  +A+ P  ++ +A   + E +  A            GTA    +   ++  P  IG
Sbjct: 169 PRPQRDANNPAGLLAIAEETLAEFLSKAT-----------GTAVDWVQMVGMKPGPDSIG 217

Query: 327 PKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGN 384
                  C   A+R   +V +    + EIL D   W             ++VL     GN
Sbjct: 218 IIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSW-------YRDCRCVDVLQIIPTGN 270

Query: 385 YNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA------- 437
             G ++++  +   P+ L   R+ + +RY     +G+  + + SL      P+       
Sbjct: 271 -GGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQATGGPSGPNTPNF 329

Query: 438 VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDR 497
           VR    PSG LI+    G S +  V+HV++D   V  + + L  +      K  +A L R
Sbjct: 330 VRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAAL-R 388

Query: 498 QCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSG 555
              ++A   +  +P G         GR+   +   ++R+   F   V+      W+ +S 
Sbjct: 389 HIRQIAHESSGEMPYG--------GGRQPAVLRTFSQRLSRGFNDAVNGFLDDGWSLMSS 440

Query: 556 TGADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDEN 603
            GA+DV +    S +                  GI+ + A+     VPP  +  FLR+  
Sbjct: 441 DGAEDVTIAINSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALLVRFLREH- 499

Query: 604 TRSEW-----DILSNGG--------------------VVQEMAHIANGRDTGNCVSLLRV 638
            RSEW     D  S                       V+  +AH     +    + L   
Sbjct: 500 -RSEWADPGVDAYSAAALRASPYAVPGLRASGFMGSQVILPLAHTLEHEEFLEVIRLEGH 558

Query: 639 NCLQSANSSQSNMLILQE-SCTDPTASF----VIYAPVDIVAMNVVLNGGDPDYVALLPS 693
           +          +M +LQ  S  D  A+     +++AP+D             D   LLPS
Sbjct: 559 SLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPID---------ESFADDAPLLPS 609

Query: 694 GFAILP-----DGTS----LHGANIGEAASGG--------------SLLTVAFQI 725
           GF ++P     D  S    L  A+  E  SGG              S+LT+AFQ 
Sbjct: 610 GFRVIPLDAKTDAPSATRTLDLASTLEVGSGGTRAASDAPSTSNTRSVLTIAFQF 664


>gi|413957204|gb|AFW89853.1| rolled leaf1 [Zea mays]
          Length = 528

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 112/520 (21%), Positives = 198/520 (38%), Gaps = 115/520 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 30  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQNRRCRDKQR 89

Query: 149 HERHE----NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENA 204
            E       N +L   N+ L  +N R ++ +S                      L  ENA
Sbjct: 90  KESSRLQAVNRKLTAMNKLLMEENERLQKQVS---------------------QLVHENA 128

Query: 205 RLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADL 264
            +R+++   S          V      +PP P                            
Sbjct: 129 HMRQQLQNTSLANDTSCESNVT-----TPPNP---------------------------- 155

Query: 265 LRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRG 324
           +R  S P+                 L+ +A+     +++   GTA    +   ++  P  
Sbjct: 156 IRDASNPSG----------------LLAIAEETFTEFLSKATGTAIDWVQMPGMKPGPDS 199

Query: 325 IGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVA 382
           +G       C   A+R   +V +     +EIL D   W            +LEV +   A
Sbjct: 200 VGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSW-------FRDCRSLEVFTRFPA 252

Query: 383 GNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP------ 436
           GN  G ++++  +   P+ LVP R+ + +RY     +G+  V + SL      P      
Sbjct: 253 GN-GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNAASTQ 311

Query: 437 -AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATL 495
             VR    PSG L++    G S V  V+H++++   V  + + L  +      K     L
Sbjct: 312 QFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVAL 371

Query: 496 DRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTL 553
            R   ++A   +        G +    GR+   +   ++R+   F   +S      W+ +
Sbjct: 372 -RHLRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVM 422

Query: 554 SGTGADDVRVM--TRKSVDDP-------GRPPGIVLSAAT 584
            G G +DV +   + K + +        G P GI+ + A+
Sbjct: 423 GGDGIEDVVIACNSTKKIRNTSNAGITFGAPGGIICAKAS 462


>gi|110349552|gb|ABG73251.1| class III HD-Zip protein HDZ32 [Ginkgo biloba]
          Length = 779

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 143/692 (20%), Positives = 266/692 (38%), Gaps = 146/692 (21%)

Query: 137 WFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDE 196
           WFQN+R + K   +R E ++L+T N KL A N    E                       
Sbjct: 1   WFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLME----------------------- 34

Query: 197 HHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGG 256
                EN RL++++ ++      Y  + + N              +A  +   +  +  G
Sbjct: 35  -----ENDRLQKQVSQL-VYENGYFRQQLQNA------------SIATTDTSCESVVTSG 76

Query: 257 EMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDE 316
           + +   + L +   P +A    ++ +A   + E +  A            GTA    +  
Sbjct: 77  Q-HQQQNHLTARHPPRDASPAGLLSIAEETLTEFLSKAT-----------GTAVEWIQMP 124

Query: 317 YVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTL 374
            ++  P  IG       C   A+R   +V +    + EIL D   W             +
Sbjct: 125 GMKPGPDSIGIVAISHGCTGVAARACGLVGIEPTKVAEILKDRPSW-------FRDCRCV 177

Query: 375 EVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP 434
           +VL+    GN  G ++++  +   P+ L   R+ + +RY     +G+  V + SL   + 
Sbjct: 178 DVLTAFSTGN-GGTVELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLVVCERSLSGTQG 236

Query: 435 SPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFG 487
            P+       VR    PSG LI+    G S +  V+H++++   V  + + L  +     
Sbjct: 237 GPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLA 296

Query: 488 AKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSAS 545
            K  +A L R   ++A  ++ ++  G         GR+  ++   ++R+   F   V+  
Sbjct: 297 QKMTMAAL-RHLRQIAQEVSCDVVLGW--------GRQPAALRTFSQRLGKGFNEAVNGF 347

Query: 546 TAHTWTTLSGTGADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPK 593
           T   W+ +   G DDV ++   S +             P    GI+ + A+     VPP 
Sbjct: 348 TDDGWSLMGNDGTDDVTILINSSPNKILGSQLASSEGFPALGGGILCAKASMLLQNVPPA 407

Query: 594 RVFDFLRDENTRSEW-----DILS--------------------NGGVVQEMAHIANGRD 628
            +  FLR+   RSEW     D  S                     G V+  +AH     +
Sbjct: 408 LLVRFLREH--RSEWADSNIDAYSAAALKASPCSVPSSRIGGFGGGQVILPLAHTVEHEE 465

Query: 629 TGNCVSLLRVNCLQSANSSQSNMLILQESCT--DPTA----SFVIYAPVD---------- 672
               + L   N L    +  S  + L + C+  D  A    + +++AP+D          
Sbjct: 466 FLEVIKL-EGNGLTQEEALLSREMFLLQLCSGVDENAVGACAELVFAPIDASFADNAPLL 524

Query: 673 -----IVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILV 727
                ++ ++  ++G  P+    L S   I P GT + G   G + +  S+LT+AFQ   
Sbjct: 525 PSGFRVIPLDSGVDGSSPNRTLDLASALEIGPAGTRVSGDYGGNSGNLRSVLTIAFQFTY 584

Query: 728 DSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           +      ++  +   V +++A +V+R+  +L+
Sbjct: 585 EDHLRENVASMARQYVRSVVA-SVQRVAMALA 615


>gi|168021319|ref|XP_001763189.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162685672|gb|EDQ72066.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1129

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 38/65 (58%), Positives = 54/65 (83%)

Query: 477 KQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLKLAERMVI 536
           ++LV +G AFGA+RWVATL+RQCER+AS++A+NI   ++G + +  GR+SMLKLA+RM  
Sbjct: 697 RELVGSGMAFGAQRWVATLERQCERVASLLASNIAPRDLGGVPSASGRRSMLKLAQRMTS 756

Query: 537 SFCAG 541
           +FCAG
Sbjct: 757 NFCAG 761


>gi|37790339|gb|AAR03321.1| homeodomain protein AHDP [Arabidopsis arenosa]
 gi|37790349|gb|AAR03326.1| homeodomain protein AHDP [Arabidopsis suecica]
 gi|37790351|gb|AAR03327.1| homeodomain protein AHDP [Arabidopsis suecica]
 gi|37790353|gb|AAR03328.1| homeodomain protein AHDP [Arabidopsis suecica]
 gi|37790355|gb|AAR03329.1| homeodomain protein AHDP [Arabidopsis suecica]
          Length = 95

 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 58/81 (71%), Gaps = 3/81 (3%)

Query: 276 KPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE 335
           K +++ELA+ AM+EL+++A   EPLW+ SLDG    LN+DEY+RTF      KPTG   E
Sbjct: 17  KSVLLELALTAMDELVKLAHSEEPLWVKSLDGERDELNQDEYMRTFS---STKPTGLATE 73

Query: 336 ASRETAVVIMNHISLVEILMD 356
           ASR + +VI+N ++LVE LMD
Sbjct: 74  ASRTSGMVIINSLALVETLMD 94


>gi|125524797|gb|EAY72911.1| hypothetical protein OsI_00785 [Oryza sativa Indica Group]
          Length = 886

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 171/789 (21%), Positives = 305/789 (38%), Gaps = 200/789 (25%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      ++P Q+K WFQN+R + K  
Sbjct: 5   KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCREKQ- 63

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E+ +L+A N +                TA+ ++      L  EN RL++
Sbjct: 64  ---------RKESSRLQALNRKL---------------TAMNKL------LMEENDRLQK 93

Query: 209 EIDRI------SAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAA 262
           ++ ++        +AA  + + V  +P  +       L  A  +   +  +  G  +   
Sbjct: 94  QVSQLVYDHGRHGVAAAGMMRRVPAFPPQAAAAAGHQLATAT-DTSCESVVTSGHHHQQQ 152

Query: 263 DLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFP 322
                   P +A    ++ +A   + E +  A            GTA    +   ++  P
Sbjct: 153 QHNVVQPPPRDASPAGLMSIAEETLTEFLSKAT-----------GTAVEWLQMPGMKPGP 201

Query: 323 RGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTG 380
             IG       C   A+R   +V M    + EIL D   W       +    +++V++  
Sbjct: 202 DSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRPLW-------LRDCRSMDVVNVL 254

Query: 381 VAGNYNGALQ-------------------------VMTAEFQVPSPLVPTRESYYVRYCK 415
            AG  NG ++                         V   +   P+ L P R+ + +RY  
Sbjct: 255 PAGA-NGTIELLYMQARTHKPENSEPEPEILKLKFVFDLQLYAPTTLAPARDFWLLRYTS 313

Query: 416 QHGEGTWAVVDVSLDNLR--PS-----PAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVD 468
              +G+  V + SL + +  PS     P +R    PSG LI+    G S +  V+H++++
Sbjct: 314 ILDDGSLVVCERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDGGGSVIHIVDHMDLE 373

Query: 469 DRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK--S 526
              V  + + L  +      K  +A L R   ++A     ++ TG         GR+  +
Sbjct: 374 PWSVPEVVRPLYESSAMVAQKISMAAL-RYLRQVAHEDTRSVITGW--------GRQPAA 424

Query: 527 MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV-------RVMTRKSVDDPGRP---P 576
           +  L++++   F   ++      W+ +   G DDV       +V+   +    G P    
Sbjct: 425 LRALSQKLTRGFNEALNGLADDGWSVIESDGVDDVCISVNSSKVIGCNATFSSGLPIVST 484

Query: 577 GIVLSAATSFWLPVPPKRVFDFLRDENTRSEW-----DIL-------------------S 612
           G++ + A+     V P  +  FLR+   RS+W     D                      
Sbjct: 485 GVLCAKASMLLQDVSPPSLLQFLREH--RSQWADSNLDAFFASAMKPNFCNLPMSRLGGF 542

Query: 613 NGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQS-----NMLILQ-----ESCTDPT 662
           +G V+  +AH     +       L V  L +A++ Q      ++ +LQ     E  +  T
Sbjct: 543 SGQVILPLAHTFEPEE------FLEVIKLGNASNYQDTLVHRDLFLLQMYNGVEESSAGT 596

Query: 663 ASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-----DGTS----LHGANIGEAA 713
            S +I+AP+D             D   LLPSGF I+P     D +S    L  A+  EAA
Sbjct: 597 CSELIFAPID---------ASFSDDSPLLPSGFRIIPIDSPLDTSSPNCTLDLASTLEAA 647

Query: 714 S-----------GGS------------LLTVAFQILVDSVPTAKLSLGSVATVNNLIACT 750
           +           GG+            ++T+AFQ   D      ++  +   + N+I+ +
Sbjct: 648 TPRSRISGVNGGGGTCAAAAASSSSKAVMTIAFQFAFDGHLQDSVAAMARQYMRNIIS-S 706

Query: 751 VERIKASLS 759
           V+RI  +LS
Sbjct: 707 VQRIAVALS 715


>gi|242086246|ref|XP_002443548.1| hypothetical protein SORBIDRAFT_08g021350 [Sorghum bicolor]
 gi|241944241|gb|EES17386.1| hypothetical protein SORBIDRAFT_08g021350 [Sorghum bicolor]
          Length = 857

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 154/715 (21%), Positives = 269/715 (37%), Gaps = 164/715 (22%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L R+      +EP Q+K WFQN+R + K  
Sbjct: 28  KYVRYTPEQVEALERVYSECPKPSSLRRQQLIRDCPILSNIEPKQIKVWFQNRRCREKQ- 86

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
                    R E+ +L+  N +                +A+ ++      L  EN RL++
Sbjct: 87  ---------RKESSRLQTVNRKL---------------SAMNKL------LMEENDRLQK 116

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ R+            +   L SP V       A  +   +  +  G      +   ++
Sbjct: 117 QVSRL------VFDNGYMKNRLHSPSV-------ATTDTSCESVVTSGHHNQQQN--PAV 161

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P + D      L   A E L          +M+   GTA    +   ++  P  +G  
Sbjct: 162 LHPPQRDANNPAGLLAIAEETLAE--------FMSKATGTAVNWVQMVGMKPGPDSVGII 213

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W             +++L     GN  
Sbjct: 214 AVSHNCSGVAARACGLVSLEPTKVAEILKDRASW-------YRDCRHVDILHVIPTGN-G 265

Query: 387 GALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VR 439
           G ++++  +    + L   R+ + +RY     +G+  + + SL      P+       +R
Sbjct: 266 GTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSLVICERSLTQSTGGPSGPNTPNFIR 325

Query: 440 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQC 499
               PSG LI+    G S +  V+HV+++   V  + + L  +      K   A L R  
Sbjct: 326 AEVLPSGYLIRPCDGGGSMIYIVDHVDLNASSVPEVLRPLYESPKILAQKMTAAAL-RHI 384

Query: 500 ERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTT-LSGT 556
            ++A   +  +P G         GR+   +   ++R+   F   VS      W++ LS  
Sbjct: 385 RQIAHESSGEMPYGV--------GRQPAVLRTFSQRLSRGFNDAVSGFPDDGWSSLLSSD 436

Query: 557 GADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENT 604
           GA+D+ +    S +                  GI+ + A+     VPP  +  FLR+   
Sbjct: 437 GAEDITISINSSPNKLIGSHVSPSPFFSAMGGGIMCAKASMLLQNVPPAILVRFLREH-- 494

Query: 605 RSEWDI--------------------LSNGGVV--QEMAHIANGRDTGNCVSLLRVNCLQ 642
           RSEW                      L  GG +  Q +  +A   +   C+ ++R+    
Sbjct: 495 RSEWADPGVDAYSAASLRANPYAVPGLRAGGFMGNQVILPLARTLEHEECLEVIRLEGHG 554

Query: 643 SANSS---QSNMLILQE-SCTDPTA----SFVIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
            ++       +M +LQ  S  D  A    + +++AP+D             D   LLPSG
Sbjct: 555 FSHEEVLMSRDMFLLQLCSGVDENAPGACAQLVFAPID---------ESFADDAPLLPSG 605

Query: 695 FAILPDGT---------SLHGANIGEAASGG---------------SLLTVAFQI 725
           F ++P            +L  A+  E  SGG               S+LT+AFQ 
Sbjct: 606 FRVIPLDAKTDVPSATRTLDLASALEVGSGGGLRALSDSSGTCTTRSVLTIAFQF 660


>gi|147792360|emb|CAN65768.1| hypothetical protein VITISV_018803 [Vitis vinifera]
          Length = 868

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 165/787 (20%), Positives = 285/787 (36%), Gaps = 219/787 (27%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 16  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 73

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+  N KL A N    E                            EN RL++
Sbjct: 74  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 104

Query: 209 EIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSI 268
           ++ ++      Y  +   N              LA  +   +  +  G+ +     L   
Sbjct: 105 QVSQL-VYENGYFRQHTQN------------TTLATKDTSCESVVTSGQHH-----LTPQ 146

Query: 269 SAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPK 328
             P +A    ++ +A   + E +  A            GTA    +   ++  P  IG  
Sbjct: 147 HPPRDASPAGLLSIAEETLTEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGIV 195

Query: 329 PTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 386
                C   A+R   +V +    + EIL D   W             ++VL+     N  
Sbjct: 196 AISHGCTGVAARACGLVGLEPTRVAEILKDRPSW-------FRDCRAVDVLNVLPTAN-G 247

Query: 387 GALQVMTAEFQVPSPLVPTRESYYV--RYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRP 444
           G ++++  +   P+ L P R+ + V   +C     G W   + S      + A  C  R 
Sbjct: 248 GTIELLYMQLYAPTTLAPARDFWLVTLYFCY----GGWKSCEWS---KHATSAAFCESRN 300

Query: 445 SG---CLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCER 501
           +      I+    G S +  V+H++++   V  + + L  +      K  +A L RQ  +
Sbjct: 301 AAKWPTCIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ 359

Query: 502 LASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTGAD 559
           +A  ++ +  TG         GR+  ++  L++R+   F   ++  T   W+ +   G D
Sbjct: 360 IAQEVSQSNVTGW--------GRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGID 411

Query: 560 DVRVMTRKSVDDPGRPPGIVLSAATSF---------------------------W----- 587
           DV ++   S   P +  G+ LS A  F                           W     
Sbjct: 412 DVTILVNSS---PEKLTGLNLSFANGFPAVSNAVLCAKASMLLQVKEEVHNLLTWGNQHL 468

Query: 588 ----------------LPVPPKRVFDFLRDENTRSEW-----DILSNGG----------- 615
                             VPP  +  FLR+   RSEW     D  S              
Sbjct: 469 SLFHLLVEFTSLFLIQQNVPPAILLRFLREH--RSEWADNNIDAYSAAAVKVGPCSLPGS 526

Query: 616 --------VVQEMAHIANGRDTGNCVSLLRV-------NCLQSANSSQSNMLILQESCTD 660
                   V+  +AH     +  N    L V       +C + A   +   L+   S  D
Sbjct: 527 RVGSFGSQVILPLAHTIEHEEASNLFIFLEVIKLEGVGHCPEDAMMPRDMFLLQLCSGMD 586

Query: 661 P----TASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGAN-------- 708
                T + +I+AP+D             D   LLPSGF I+P  +    ++        
Sbjct: 587 ENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKEASSPNRTLDLA 637

Query: 709 ----IGEA---------ASGG---SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVE 752
               IG A          +GG   S++T+AF+   +S     ++  +   V ++I+ +V+
Sbjct: 638 SALEIGPAGNRSSNDYSVNGGNTRSVMTIAFEFAFESHLQENVASMARQYVRSIIS-SVQ 696

Query: 753 RIKASLS 759
           R+  +LS
Sbjct: 697 RVALALS 703


>gi|242039345|ref|XP_002467067.1| hypothetical protein SORBIDRAFT_01g019120 [Sorghum bicolor]
 gi|241920921|gb|EER94065.1| hypothetical protein SORBIDRAFT_01g019120 [Sorghum bicolor]
          Length = 838

 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 112/482 (23%), Positives = 186/482 (38%), Gaps = 108/482 (22%)

Query: 324 GIGPKPTGF---------KCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTL 374
           G+ P P  F         +  A+R   +V +    +VEIL D   W            +L
Sbjct: 188 GMKPGPDSFGIVTISHGGRGVAARACGLVNLEPTKIVEILKDRPSW-------FRDCRSL 240

Query: 375 EVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL----D 430
           EV +   AGN  G ++++  +   P+ LVP R+ + +RY     +G+  V + SL    D
Sbjct: 241 EVFTMLPAGN-GGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGD 299

Query: 431 NLRPSPA---VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFG 487
               + A   VR    PSG L+++   G S V  V+H+++D   V  + + L  +     
Sbjct: 300 GQSAATAQQFVRAEMLPSGYLVRQCEGGGSIVRIVDHLDLDAWSVPEVLRPLYESSRVVA 359

Query: 488 AKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSAS 545
            K   A L R   ++A   +        G +    GR+   +   ++R+   F   +S  
Sbjct: 360 QKMTTAAL-RHLRQIAQETS--------GEVVYAMGRQPAVLRTFSQRLSRGFNDAISGF 410

Query: 546 TAHTWTTLSGTGADDVRVMTR----KSVDDP----GRPPGIVLSAATSFWLPVPPKRVFD 597
               W+ ++G G +DV +       +S  +P    G P GI+ + A+     VPP  +  
Sbjct: 411 NDDGWSIMAGDGIEDVIIACNSKKIRSGSNPATAFGAPGGIICAKASMLLQSVPPAVLVR 470

Query: 598 FLRDENTRSEWD-------------------------ILSNGGVVQEMAHIANGRDTGNC 632
           FLR+   RSEW                            S   ++  +AH     +    
Sbjct: 471 FLREH--RSEWADYNFDAYSASALKTSPCSLPGLRPMRFSGSQIIMPLAHTVENEEILEV 528

Query: 633 VSLLRVNCLQSANSSQSNMLILQESCTDPTASF-----VIYAPVDIVAMNVVLNGGDPDY 687
           V L              ++ +LQ        S      +++AP+D +          PD 
Sbjct: 529 VRLEGQTLTHDEGLLSRDIHLLQLCTGIDEKSMGSCFQLVFAPIDELF---------PDD 579

Query: 688 VALLPSGFAILP-----DG----------TSLH-GANIGEAASGG--------SLLTVAF 723
             L+ SGF ++P     DG          +SL  GA   +A++ G        S+LT+AF
Sbjct: 580 APLISSGFRVIPLDIKTDGLSSGRTLDLASSLEVGATTQQASADGSQDACNLRSVLTIAF 639

Query: 724 QI 725
           Q 
Sbjct: 640 QF 641



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 27  KYVRYTPEQVETLERVYAECPKPSSARRQQLLRECPILSNIEPKQIKVWFQNRRCRDK-- 84

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E+++L+  N KL A N
Sbjct: 85  -QRKESSRLQAVNRKLTAMN 103


>gi|15236909|ref|NP_194422.1| StAR-related lipid-transfer protein [Arabidopsis thaliana]
 gi|7269545|emb|CAB79547.1| putative homeodomain protein [Arabidopsis thaliana]
 gi|332659870|gb|AEE85270.1| StAR-related lipid-transfer protein [Arabidopsis thaliana]
          Length = 461

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 118/476 (24%), Positives = 199/476 (41%), Gaps = 108/476 (22%)

Query: 287 MEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMN 346
           + E+I +A +  PLW  S       LNE  Y R FP      P  F  EASR + V+ ++
Sbjct: 72  VNEIIALATLESPLWRRSQREEMLTLNE-YYSRFFPWYAKNVPR-FVHEASRASEVIHVD 129

Query: 347 HISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEF-QVPSPLVPT 405
              L+  L +  +W T+F  +V         +  +  + +    ++  EF  + +P++PT
Sbjct: 130 ASWLLTKLKNPMRWVTIFPSLVG--------NVSIESSNDDVRMIIDMEFLTLITPVIPT 181

Query: 406 RESYYVRYCKQHGEGTWAVVDVSL------DNLRPSPAVRCRRRPSGCLIQEMPNGYSKV 459
           R+   +RYC +    TW + D+S+      D+LRP       R PSG +I+ +   + +V
Sbjct: 182 RKVKVLRYCHRIANDTWIIADISMYLSSYSDDLRP----EFLRFPSGFIIKHVARIF-RV 236

Query: 460 TWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVIT 519
           T       +  G +NL +          +KR V      C            +G  GVI 
Sbjct: 237 T-------NSAGKNNLLQ---------ASKRLVHIF---C------------SGTCGVIG 265

Query: 520 NQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIV 579
           N+ GR                         W  L      DVRV + +S D    P GI+
Sbjct: 266 NR-GR-------------------------W--LGAGRRFDVRVSSLESRDMIRHPYGII 297

Query: 580 LSAATSFWLPVPPKRVFDFLRDENTRSEWDILS-NGGVVQEMAHIANGRDTG-NCVSLLR 637
            SA+    +   P+ +F  +         + L  +G  ++++  I     T  N VSL  
Sbjct: 298 -SASGLTKIHAKPEILFPLIYGVKKLEIHNHLRLSGNDLKQVLRITRDDITSRNDVSLF- 355

Query: 638 VNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAI 697
               +  NS++  + +LQE+  + ++S VI++ +D+ ++  ++N GD  Y    P GF I
Sbjct: 356 --SFRLNNSTE--VFLLQEAYNEASSSMVIHSILDVSSLAKIIN-GDRSYSFTYPCGFTI 410

Query: 698 LPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVER 753
           +P      G N G+    G +++V F           L++ +   V N +   VER
Sbjct: 411 MP------GQNSGD-EDAGCVVSVGF-----------LTIATEEIVANTLVSDVER 448


>gi|222625436|gb|EEE59568.1| hypothetical protein OsJ_11861 [Oryza sativa Japonica Group]
          Length = 807

 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 151/676 (22%), Positives = 253/676 (37%), Gaps = 164/676 (24%)

Query: 129 LEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTA 188
           +EP Q+K WFQN+R + K   +R E ++L+T N KL A N    E               
Sbjct: 20  IEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLME--------------- 61

Query: 189 IGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFG 248
                        EN RL++++ R+      Y+ + + N        PS    +A  +  
Sbjct: 62  -------------ENDRLQKQVSRL-VYENGYMRQQLHN--------PS----VATTDTS 95

Query: 249 AQPGIGGGEMYGAADLLRSISAPT-EADKPM-IIELAVAAMEELIRMAQMGEPLWMTSLD 306
            +  +  G+ +   +   + + P  +A+ P  ++ +A   + E +  A            
Sbjct: 96  CESVVTSGQHHQQQN--PAATRPQRDANNPAGLLAIAEETLAEFLSKAT----------- 142

Query: 307 GTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVF 364
           GTA    +   ++  P  IG       C   A+R   +V +    + EIL D   W    
Sbjct: 143 GTAVDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSW---- 198

Query: 365 SGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAV 424
                    ++VL     GN  G ++++  +   P+ L   R+ + +RY     +G+  +
Sbjct: 199 ---YRDCRCVDVLHVIPTGN-GGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVI 254

Query: 425 VDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYK 477
            + SL      P+       VR    PSG LI+    G S +  V+HV++D   V  + +
Sbjct: 255 CERSLTQSTGGPSGPNTPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLR 314

Query: 478 QLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMV 535
            L  +      K  +A L R   ++A   +  +P G         GR+   +   ++R+ 
Sbjct: 315 PLYESPKILAQKMTIAAL-RHIRQIAHESSGEMPYG--------GGRQPAVLRTFSQRLS 365

Query: 536 ISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDD------------PGRPPGIVLSAA 583
             F   V+      W+ +S  GA+DV +    S +                  GI+ + A
Sbjct: 366 RGFNDAVNGFPDDGWSLMSSDGAEDVTIAFNSSPNKLVGSHVNSSQLFSAIGGGILCAKA 425

Query: 584 TSFWLPVPPKRVFDFLRDENTRSEWDI--------------------LSNGG-----VVQ 618
           +     VPP  +  FLR+   RSEW                      L  GG     V+ 
Sbjct: 426 SMLLQNVPPALLVRFLREH--RSEWADPGVDAYSAAALRASPYAVPGLRAGGFMGSQVIL 483

Query: 619 EMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQE-SCTDPTASF----VIYAPVDI 673
            +AH     +    + L   +          +M +LQ  S  D  A+     +++AP+D 
Sbjct: 484 PLAHTLEHEEFLEVIRLEGHSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPID- 542

Query: 674 VAMNVVLNGGDPDYVALLPSGFAILP-DGT--------SLHGANIGEAASGG-------- 716
                       D   LLPSGF ++P DG         +L  A+  E  SGG        
Sbjct: 543 --------ESFADDAPLLPSGFRVIPLDGKTDAPSATRTLDLASTLEVGSGGTTRASSDT 594

Query: 717 -------SLLTVAFQI 725
                  S+LT+AFQ 
Sbjct: 595 SSTCNTRSVLTIAFQF 610


>gi|4455215|emb|CAB36538.1| putative homeodomain protein [Arabidopsis thaliana]
          Length = 442

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 189/446 (42%), Gaps = 97/446 (21%)

Query: 287 MEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMN 346
           + E+I +A +  PLW  S       LNE  Y R FP      P  F  EASR + V+ ++
Sbjct: 72  VNEIIALATLESPLWRRSQREEMLTLNE-YYSRFFPWYAKNVPR-FVHEASRASEVIHVD 129

Query: 347 HISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEF-QVPSPLVPT 405
              L+  L +  +W T+F  +V         +  +  + +    ++  EF  + +P++PT
Sbjct: 130 ASWLLTKLKNPMRWVTIFPSLVG--------NVSIESSNDDVRMIIDMEFLTLITPVIPT 181

Query: 406 RESYYVRYCKQHGEGTWAVVDVSL------DNLRPSPAVRCRRRPSGCLIQEMPNGYSKV 459
           R+   +RYC +    TW + D+S+      D+LRP       R PSG +I+ +   + +V
Sbjct: 182 RKVKVLRYCHRIANDTWIIADISMYLSSYSDDLRP----EFLRFPSGFIIKHVARIF-RV 236

Query: 460 TWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVIT 519
           T       +  G +NL +          +KR V      C            +G  GVI 
Sbjct: 237 T-------NSAGKNNLLQ---------ASKRLVHIF---C------------SGTCGVIG 265

Query: 520 NQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIV 579
           N+ GR                         W  L      DVRV + +S D    P GI+
Sbjct: 266 NR-GR-------------------------W--LGAGRRFDVRVSSLESRDMIRHPYGII 297

Query: 580 LSAATSFWLPVPPKRVFDFLRDENTRSEWDILS-NGGVVQEMAHIANGRDTG-NCVSLLR 637
            SA+    +   P+ +F  +         + L  +G  ++++  I     T  N VSL  
Sbjct: 298 -SASGLTKIHAKPEILFPLIYGVKKLEIHNHLRLSGNDLKQVLRITRDDITSRNDVSLF- 355

Query: 638 VNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAI 697
               +  NS++  + +LQE+  + ++S VI++ +D+ ++  ++N GD  Y    P GF I
Sbjct: 356 --SFRLNNSTE--VFLLQEAYNEASSSMVIHSILDVSSLAKIIN-GDRSYSFTYPCGFTI 410

Query: 698 LPDGTSLHGANIGEAASGGSLLTVAF 723
           +P      G N G+    G +++V F
Sbjct: 411 MP------GQNSGD-EDAGCVVSVGF 429


>gi|224131988|ref|XP_002328157.1| predicted protein [Populus trichocarpa]
 gi|60327623|gb|AAX19051.1| class III HD-Zip protein 2 [Populus trichocarpa]
 gi|222837672|gb|EEE76037.1| predicted protein [Populus trichocarpa]
          Length = 844

 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 147/678 (21%), Positives = 256/678 (37%), Gaps = 151/678 (22%)

Query: 75  NHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLE 130
           + E +S     +      +Y R+T  Q++ +E  + ECP P   +R++L RE      +E
Sbjct: 7   HRESSSSGSINKHLTDDGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILANIE 66

Query: 131 PLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIG 190
           P Q+K WF         Q+ R    Q R E+ +L+  N +                    
Sbjct: 67  PKQIKVWF---------QNRRCREKQ-RKESSRLQTVNRK-------------------- 96

Query: 191 EMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQ 250
                   L   N  L EE DR+     K V + V     +   + +   + +  +  A 
Sbjct: 97  --------LTAMNKLLMEENDRLQ----KQVSQLVCENGFMRQQLQTVTTDASCDSVVAT 144

Query: 251 PGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAA 310
           P             LR  + P       ++ +A   + E +  A            GTA 
Sbjct: 145 P----------QHSLRDANNPAG-----LLSIAEETLSEFLAKA-----------TGTAL 178

Query: 311 VLNEDEYVRTFPRGIGPKPTGFKC--EASRETAVVIMNHISLVEILMDVNQWSTVFSGIV 368
              +   ++  P  IG      +C   A+R   +V +    + EIL D + W        
Sbjct: 179 EWVQMPGMKPGPDSIGIFSISQRCGGVAARACGLVSLEPKKIAEILKDRSSW-------F 231

Query: 369 SRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS 428
                LEV +   AGN  G ++++ ++   P+ L P R+ + +RY      G+  V + S
Sbjct: 232 RDCRNLEVFTMFPAGN-GGTIELVYSQIYAPTTLAPARDMWTLRYTTSLENGSLVVCERS 290

Query: 429 LDNLRPSP-------AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVS 481
           L      P        VR    PSG LI+    G S +  V+H+ +    V  + + L  
Sbjct: 291 LSGYGAGPDAAAAAQFVRAEMLPSGYLIRPCEGG-SIIHIVDHLNLQAWSVPEVLRPLYE 349

Query: 482 TGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK-SMLK-LAERMVISFC 539
           +  A   K  +A L R   ++A   +  +  G         GR+ ++L+   +R+   F 
Sbjct: 350 SSKAVAQKMTIAAL-RYVRQVAHETSGEVVYGL--------GRQPAVLRTFNQRLSRGFN 400

Query: 540 AGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPP---------GIVLSAATSFWLPV 590
             ++      W+ ++  GA+DV +    + +  G            GI+ + A+     V
Sbjct: 401 DAINGFNDDGWSLMNADGAEDVIIAVNSTKNLIGANNSAHSLSFLGGILCAKASMLLQNV 460

Query: 591 PPKRVFDFLRDENTRSEWDILS----NGGVVQEMAHIANG----RDTGNCVS-------- 634
            P  +  FLR+ +  +EW   S    +  + +  ++   G    R TG+ ++        
Sbjct: 461 HPAVLVCFLREHH--AEWADFSVDAYSAALWKAGSYAYPGMRPMRFTGSQITMPLGHTIE 518

Query: 635 ---LLRVNCLQSANSSQSNMLILQE-------SCTDPTA----SFVIYAPVDIVAMNVVL 680
              LL V  L+  + +Q +  + Q+       S  D  A    S +++AP+D        
Sbjct: 519 QEDLLEVIRLEGHSFAQEDAFVSQDIHLLQICSGIDENAVGACSELVFAPIDETF----- 573

Query: 681 NGGDPDYVALLPSGFAIL 698
               PD   LLPSGF I+
Sbjct: 574 ----PDDAPLLPSGFRII 587


>gi|206572101|gb|ACI13683.1| putative PHV HD-ZIPIII [Malus x domestica]
          Length = 783

 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 112/500 (22%), Positives = 184/500 (36%), Gaps = 103/500 (20%)

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMS 193
           +K WFQN+R + K   +R E+++L+T N KL A N    E                  + 
Sbjct: 1   IKVWFQNRRCREK---QRKESSRLQTVNRKLTAMNKLLMEEND--------------RLQ 43

Query: 194 FDEHHLRLENARLREEIDRISAIAAKYVGKPVV---NYPLLSPPVPSRPLELAVGNFGAQ 250
               HL  EN  +++++   S        + VV    +     P P  P           
Sbjct: 44  KQVSHLVYENGFMKQQLHTASGTTTDNSCESVVMSGQHQQQQNPTPQHPQR--------- 94

Query: 251 PGIGGGEMYGAADLLRSISAPTEADKPM-IIELAVAAMEELIRMAQMGEPLWMTSLDGTA 309
                                 +A+ P  ++ +A   + E +  A            GTA
Sbjct: 95  ----------------------DANNPAGLLAIAEETLAEFLSKAT-----------GTA 121

Query: 310 AVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGI 367
               +   ++  P  IG       C   A+R   +V +    + EIL D   W       
Sbjct: 122 VDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRKSW------- 174

Query: 368 VSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDV 427
                 LEVLS   AGN  G ++++  +   P+ L   R+ + +RY     +G+  V + 
Sbjct: 175 FRDCRCLEVLSLIPAGN-GGTIELVYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVVCER 233

Query: 428 SLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLV 480
           SL +    P        VR    PSG LI+    G S +  V+HV++D   V  + + L 
Sbjct: 234 SLTSSTGGPPGPTSASFVRAEMLPSGYLIRPCEGGGSIINIVDHVDLDAWSVPEVLRSLY 293

Query: 481 STGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISF 538
            +      K  ++ L R   ++A   +        G I +  GR+   +    +R+   F
Sbjct: 294 ESSKILAQKTTISAL-RHIRQIAQESS--------GEIQHGGGRQPAVLRTFCQRLCSGF 344

Query: 539 CAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGR-------PP---GIVLSAATSFWL 588
              V+      WT +   G +DV +    S    G        PP   G++ + A+    
Sbjct: 345 NDAVNGFADDGWTLMGSDGVEDVTIAINSSPKVLGSQYNTSIFPPFGGGVLCAKASMLLQ 404

Query: 589 PVPPKRVFDFLRDENTRSEW 608
            VPP  +  FLR+   R+EW
Sbjct: 405 SVPPALLVRFLREH--RAEW 422


>gi|110349532|gb|ABG73241.1| class III HD-Zip protein HDZ32 [Ceratopteris richardii]
          Length = 803

 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 147/697 (21%), Positives = 252/697 (36%), Gaps = 170/697 (24%)

Query: 137 WFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDE 196
           WFQN+R + K   +R E ++L+T N KL A N    E                       
Sbjct: 1   WFQNRRCREK---QRKETSRLQTVNSKLTAMNKLLME----------------------- 34

Query: 197 HHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGG 256
                EN RL++++ +                           L    G F  Q   GG 
Sbjct: 35  -----ENDRLQKQVAQ---------------------------LMYENGYFRQQLQHGGV 62

Query: 257 EMYGAADL-----LRSISAPTEADKPM-------IIELAVAAMEELIRMAQMGEPLWMTS 304
               + D      L+ + AP +   P+       +I LA  A+ + +  A      W+  
Sbjct: 63  TTDTSCDSVVTSGLQHLPAPQQQQSPLQDGSYAGVISLAEEALSDFLSKATGTSVNWI-Q 121

Query: 305 LDGTAAVLNEDEYVRTFPRGIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVF 364
           + G     +    V   P G     TG     +R   ++ +    +VE+  D   W    
Sbjct: 122 MPGMKPGPDFMSMVNIMPHG----ATGI---GARACGLINLEPSKIVEVFKDKPTWL--- 171

Query: 365 SGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAV 424
                R           +    G ++V+ ++   P+ L P ++   +RY     +G++ V
Sbjct: 172 -----RECRRMTTMFSTSTTGGGTIEVLYSQMYAPTTLAPAKDFCTLRYTTVSDDGSYVV 226

Query: 425 VDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYK 477
            + SL+  +  P        VR      GCLI+      S V  V+H++++   +  + +
Sbjct: 227 CERSLNGAQTVPTAPQISAFVRADMFTGGCLIRPCETSGSIVVVVDHMDLESWSIPEVLR 286

Query: 478 QLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMV 535
            L  +      K  +A L +    +A   A + P           G++  ++  L+ R+ 
Sbjct: 287 PLYESSTILAHKVTIAAL-KHLRHIAQENALDSPGA---------GQQPAAVRSLSYRIA 336

Query: 536 ISFCAGVSASTAHTWTTLSGTGADDVRVMTRK----------SVDDPGRPPGIVLSAATS 585
            +F   V+      W  L+G G DDV VM +           S+         VL A  S
Sbjct: 337 KAFNDAVNGFPDDGWVPLTGDGVDDVTVMMKGPVNAGPVDHLSLHQSSSINSSVLCAKAS 396

Query: 586 FWLP-VPPKRVFDFLRDENTRSEW--------------------DILSNGGVVQEMAHIA 624
             L  VPP  +  F+R+   RSEW                       SN  ++Q   H  
Sbjct: 397 MLLQHVPPALLVQFMREH--RSEWADPVCEEAMRMSNPGFSGFHAATSNSQLLQPQVHSI 454

Query: 625 NGRDTGNCVSLLRVNCL----QSANSSQSNMLILQ-----ESCTDPTASFVIYAPVDIVA 675
              +    + +   N +    QS  +SQ +M +LQ     E  +    + +++AP+D   
Sbjct: 455 EEDEFLELIKMEGQNSVSIQDQSLMNSQ-DMFLLQLCSGLEDKSSGACAQMVFAPID--- 510

Query: 676 MNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPT--- 732
                     D +AL+PSGF ++P     H   +  A+SG +L   +F  + ++  +   
Sbjct: 511 ------ASVSDDIALIPSGFRVIPLDIEPHD-QVNAASSGRTLDLASFLEVSNTTSSGGQ 563

Query: 733 ---------AKLSLGSVATVNNLIACTVERIKASLSC 760
                    A  SL SV T+    +C   R+  S++C
Sbjct: 564 DELHSRGRGAGGSLRSVLTIAFQFSCIEARMHDSVAC 600


>gi|414864315|tpg|DAA42872.1| TPA: putative homeobox/lipid-binding domain family protein, partial
           [Zea mays]
          Length = 917

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 188/487 (38%), Gaps = 107/487 (21%)

Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
           GI     G +  A+R   +V +    ++EIL D   W            +LEV +   AG
Sbjct: 198 GIVAISHGCRGVAARACGLVNLEPTKVIEILKDRPSW-------FRDCRSLEVFTMFPAG 250

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP------- 436
           N  G ++++  +   P+ LVP R+ + +RY     +G+  V + SL      P       
Sbjct: 251 N-GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLTGSGGGPNAASAQQ 309

Query: 437 AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD 496
            VR    PSG L++    G S V  V+H++++   V  + + L  +      K     L 
Sbjct: 310 FVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVAL- 368

Query: 497 RQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLS 554
           R   ++A   +        G +    GR+   +   ++R+   F   +S      W+ + 
Sbjct: 369 RHLRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMG 420

Query: 555 GTGADDVRVM---TRKSVDDP------GRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
           G G +DV V    T+K  ++       G P GI+ + A+     VPP  +  FLR+   R
Sbjct: 421 GDGIEDVVVACNSTKKIRNNSNAGITFGAPGGIICAKASMLLQSVPPAVLVRFLREH--R 478

Query: 606 SEWD-------------------------ILSNGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           SEW                            S G ++  +AH     +    V L     
Sbjct: 479 SEWADYNIDAYLASSLKTSACSLPGLRPMRFSGGQMIMPLAHTVENEEILEVVRL-EGQP 537

Query: 641 LQSANSSQSNMLILQESCT-----DPTASF-VIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
           L    +  S  + L + CT        +SF +++AP+D            PD   L+ SG
Sbjct: 538 LTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID---------EHFPDDAPLISSG 588

Query: 695 FAILP-----DGTS-------LHGANIGEA---ASGG---------SLLTVAFQI----- 725
           F ++P     DG S           ++G A   ASG          S+LT+AFQ      
Sbjct: 589 FRVIPLDMKTDGVSSGRTLDLASSLDVGSAAPQASGDAPPDDCNLRSVLTIAFQFPYEMH 648

Query: 726 LVDSVPT 732
           L DSV T
Sbjct: 649 LQDSVAT 655



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 27  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQNRRCRDK-- 84

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E+++L+  N KL A N
Sbjct: 85  -QRKESSRLQAVNRKLTAMN 103


>gi|60327621|gb|AAX19050.1| class III HD-Zip protein 1 [Populus trichocarpa]
          Length = 855

 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 124/546 (22%), Positives = 219/546 (40%), Gaps = 105/546 (19%)

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNH 347
           L+ +A+     +++   GTA    +   ++  P  +G      +C   A+R   +V +  
Sbjct: 162 LLSLAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQRCSGVAARACGLVSLEP 221

Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
             L EIL D   W             LEV +   AGN  G ++++ ++   P+ L P R+
Sbjct: 222 TKLAEILKDRQSW-------FRDCRNLEVFTVFPAGN-GGTIELLYSQIYAPTTLAPARD 273

Query: 408 SYYVRYCKQHGEGTWAVVDVSLDNLRPSP-------AVRCRRRPSGCLIQEMPNGYSKVT 460
            + +RY      G+  V + SL      P        VR    PSG LI+    G S + 
Sbjct: 274 FWTLRYTINLENGSLVVCERSLSGSGAGPNAAAAAQFVRAEMLPSGYLIRPCEGGGSIIH 333

Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITN 520
            V+H+ +    V  + + L  +  A   K  +  L R   ++A   +  +  G       
Sbjct: 334 IVDHLNLQAWSVPEVLRPLYESSKAVAQKVTITAL-RHVRQIAHETSGEVVYGL------ 386

Query: 521 QDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV--RVMTRKSVDDPGRPP 576
             GR+   +   ++R+   F   ++      W+ ++  GA+DV   V T K++     P 
Sbjct: 387 --GRQPAVLRTFSQRLSRGFNDAINGFNDDGWSLMNSDGAEDVIIAVNTTKNLISANNPA 444

Query: 577 -------GIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILS----NGGVVQEMAHIAN 625
                  GI+ + A+     VPP  +  FLR+   RSEW   S    +   ++  ++   
Sbjct: 445 HSLSFLGGILCAKASMLLQNVPPAVLVRFLREH--RSEWADFSVDAYSAASLKAGSYAYP 502

Query: 626 G----RDTGNCV-----------SLLRVNCLQSANSSQSNMLI-----LQESCT--DPTA 663
           G    R TG+ +            LL V  L+  + +Q +  +     L + C+  D  A
Sbjct: 503 GMRSMRFTGSQIIMPLGHTIEQEELLEVIRLEGHSFAQEDAFVSRDIHLLQICSGIDENA 562

Query: 664 ----SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP------------------DG 701
               S +++AP+D +          PD   LLPSGF ++P                  D 
Sbjct: 563 VGACSELVFAPIDEMF---------PDDAPLLPSGFRVIPLESKTKDAQEALTTNRTLDL 613

Query: 702 TSL--------HGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVER 753
           TS         H +  G +    S+LT+AFQ   +S     ++  +   V ++I+ +V+R
Sbjct: 614 TSSLEVGPVTNHASVDGSSCHLRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS-SVQR 672

Query: 754 IKASLS 759
           +  ++S
Sbjct: 673 VATAIS 678



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 14/101 (13%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 27  KYVRYTSEQVEALERVYAECPKPSSLRRQQLIRECPILANIEPKQIKVWFQNRRCREK-- 84

Query: 149 HERHENTQLRTENEKLRA-------DNMRYREALSNASCPN 182
            +R E+++L+T N KL A       +N R ++ +S   C N
Sbjct: 85  -QRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 124


>gi|195653951|gb|ACG46443.1| hypothetical protein [Zea mays]
          Length = 73

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/42 (92%), Positives = 42/42 (100%)

Query: 717 SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASL 758
           SLLTVAFQILVDSVPTAKLSLGSVATVN+LIACTVERIKA++
Sbjct: 24  SLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAV 65


>gi|15226808|ref|NP_181018.1| homeobox-leucine zipper protein ATHB-14 [Arabidopsis thaliana]
 gi|75096986|sp|O04291.1|ATB14_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-14; AltName:
           Full=HD-ZIP protein ATHB-14; AltName: Full=Homeodomain
           transcription factor ATHB-14; AltName: Full=Protein
           PHABULOSA
 gi|2145356|emb|CAA72007.1| HD-Zip protein [Arabidopsis thaliana]
 gi|3132474|gb|AAC16263.1| homeodomain transcription factor (ATHB-14) [Arabidopsis thaliana]
 gi|20152534|emb|CAD29659.1| homeodomain-leucine zipper protein 14 [Arabidopsis thaliana]
 gi|20466650|gb|AAM20642.1| homeodomain transcription factor [Arabidopsis thaliana]
 gi|23198254|gb|AAN15654.1| homeodomain transcription factor [Arabidopsis thaliana]
 gi|330253918|gb|AEC09012.1| homeobox-leucine zipper protein ATHB-14 [Arabidopsis thaliana]
          Length = 852

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 122/515 (23%), Positives = 200/515 (38%), Gaps = 103/515 (20%)

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNH 347
           L+ +A+     +++   GTA    +   ++  P  IG       C   A+R   +V +  
Sbjct: 171 LLSIAEEALAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAISRNCSGIAARACGLVSLEP 230

Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
           + + EIL D   W       +    +++ LS   AGN  G ++++  +   P+ L   R+
Sbjct: 231 MKVAEILKDRPSW-------LRDCRSVDTLSVIPAGN-GGTIELIYTQMYAPTTLAAARD 282

Query: 408 SYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVT 460
            + +RY     +G++ V + SL +    P        VR   +PSG LI+    G S + 
Sbjct: 283 FWTLRYSTCLEDGSYVVCERSLTSATGGPTGPPSSNFVRAEMKPSGFLIRPCDGGGSILH 342

Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITN 520
            V+HV++D   V  + + L  +      K  VA L R   ++A   +  +  G       
Sbjct: 343 IVDHVDLDAWSVPEVMRPLYESSKILAQKMTVAAL-RHVRQIAQETSGEVQYG------- 394

Query: 521 QDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDD------- 571
             GR+   +   ++R+   F   V+      W+ +   GA+DV VM   S          
Sbjct: 395 -GGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMGSDGAEDVTVMINLSPGKFGGSQYG 453

Query: 572 ----PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW-----DILSNGGVVQEMAH 622
               P    G++ + A+     VPP  +  FLR+   RSEW     D  +   +      
Sbjct: 454 NSFLPSFGSGVLCAKASMLLQNVPPAVLVRFLREH--RSEWADYGVDAYAAASLRASPFA 511

Query: 623 IANGRDTG---NCVSL-----------LRVNCLQSANSSQSNM-----LILQESCTDPTA 663
           +   R  G   N V L           L V  L+    S  +M     + L + C+    
Sbjct: 512 VPCARAGGFPSNQVILPLAQTVEHEESLEVVRLEGHAYSPEDMGLARDMYLLQLCSGVDE 571

Query: 664 SFV------IYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL-------PDGTS------- 703
           + V      ++AP+D             D   LLPSGF I+       P+G S       
Sbjct: 572 NVVGGCAQLVFAPID---------ESFADDAPLLPSGFRIIPLEQKSTPNGASANRTLDL 622

Query: 704 ---LHGA--NIGEAASGG----SLLTVAFQILVDS 729
              L G+    GEA   G    S+LT+AFQ   D+
Sbjct: 623 ASALEGSTRQAGEADPNGCNFRSVLTIAFQFTFDN 657



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 25  KYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 82

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E  +L+T N KL A N
Sbjct: 83  -QRKEAARLQTVNRKLNAMN 101


>gi|414864313|tpg|DAA42870.1| TPA: putative homeobox/lipid-binding domain family protein isoform
           1 [Zea mays]
 gi|414864314|tpg|DAA42871.1| TPA: putative homeobox/lipid-binding domain family protein isoform
           2 [Zea mays]
          Length = 840

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 188/487 (38%), Gaps = 107/487 (21%)

Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
           GI     G +  A+R   +V +    ++EIL D   W            +LEV +   AG
Sbjct: 198 GIVAISHGCRGVAARACGLVNLEPTKVIEILKDRPSW-------FRDCRSLEVFTMFPAG 250

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP------- 436
           N  G ++++  +   P+ LVP R+ + +RY     +G+  V + SL      P       
Sbjct: 251 N-GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLTGSGGGPNAASAQQ 309

Query: 437 AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD 496
            VR    PSG L++    G S V  V+H++++   V  + + L  +      K     L 
Sbjct: 310 FVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVAL- 368

Query: 497 RQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLS 554
           R   ++A   +        G +    GR+   +   ++R+   F   +S      W+ + 
Sbjct: 369 RHLRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMG 420

Query: 555 GTGADDVRVM---TRKSVDDP------GRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
           G G +DV V    T+K  ++       G P GI+ + A+     VPP  +  FLR+   R
Sbjct: 421 GDGIEDVVVACNSTKKIRNNSNAGITFGAPGGIICAKASMLLQSVPPAVLVRFLREH--R 478

Query: 606 SEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           SEW                            S G ++  +AH     +    V L     
Sbjct: 479 SEWADYNIDAYLASSLKTSACSLPGLRPMRFSGGQMIMPLAHTVENEEILEVVRL-EGQP 537

Query: 641 LQSANSSQSNMLILQESCT-----DPTASF-VIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
           L    +  S  + L + CT        +SF +++AP+D            PD   L+ SG
Sbjct: 538 LTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID---------EHFPDDAPLISSG 588

Query: 695 FAILP-----DGTS-------LHGANIGEA---ASGG---------SLLTVAFQI----- 725
           F ++P     DG S           ++G A   ASG          S+LT+AFQ      
Sbjct: 589 FRVIPLDMKTDGVSSGRTLDLASSLDVGSAAPQASGDAPPDDCNLRSVLTIAFQFPYEMH 648

Query: 726 LVDSVPT 732
           L DSV T
Sbjct: 649 LQDSVAT 655



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 27  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQNRRCRDK-- 84

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E+++L+  N KL A N
Sbjct: 85  -QRKESSRLQAVNRKLTAMN 103


>gi|162459714|ref|NP_001105994.1| rolled leaf 2 [Zea mays]
 gi|82754245|gb|ABB89930.1| rolled leaf 2 [Zea mays]
          Length = 840

 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 188/487 (38%), Gaps = 107/487 (21%)

Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
           GI     G +  A+R   +V +    ++EIL D   W            +LEV +   AG
Sbjct: 198 GIVAISHGCRGVAARACGLVNLEPTKVIEILKDRPSW-------FRDCRSLEVFTMFPAG 250

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP------- 436
           N  G ++++  +   P+ LVP R+ + +RY     +G+  V + SL      P       
Sbjct: 251 N-GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLTGSGGGPNAASAQQ 309

Query: 437 AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD 496
            VR    PSG L++    G S V  V+H++++   V  + + L  +      K     L 
Sbjct: 310 FVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVAL- 368

Query: 497 RQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLS 554
           R   ++A   +        G +    GR+   +   ++R+   F   +S      W+ + 
Sbjct: 369 RHLRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMG 420

Query: 555 GTGADDVRVM---TRKSVDDP------GRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
           G G +DV V    T+K  ++       G P GI+ + A+     VPP  +  FLR+   R
Sbjct: 421 GDGIEDVVVACNSTKKIRNNSNAGITFGAPGGIICAKASMLLQSVPPAVLVRFLREH--R 478

Query: 606 SEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVNC 640
           SEW                            S G ++  +AH     +    V L     
Sbjct: 479 SEWADYNIDAYLASSLKTSACSLPGLRPMRFSGGQMIMPLAHTVENEEILEVVRL-EGQP 537

Query: 641 LQSANSSQSNMLILQESCT-----DPTASF-VIYAPVDIVAMNVVLNGGDPDYVALLPSG 694
           L    +  S  + L + CT        +SF +++AP+D            PD   L+ SG
Sbjct: 538 LTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID---------EHFPDDAPLISSG 588

Query: 695 FAILP-----DGTS-------LHGANIGEA---ASGG---------SLLTVAFQI----- 725
           F ++P     DG S           ++G A   ASG          S+LT+AFQ      
Sbjct: 589 FRVIPLDMKTDGVSSGRTLDLASSLDVGSAAPQASGDAPPDDCNLRSVLTIAFQFPYEMH 648

Query: 726 LVDSVPT 732
           L DSV T
Sbjct: 649 LQDSVAT 655



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 30/162 (18%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 27  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQNRRCRDKQR 86

Query: 149 HERHE-----------NTQLRTENEKLRA-------DNMRYREALSNASCPN-------- 182
            E              N  L  ENE+L+        +N   R+ L N S  N        
Sbjct: 87  KESSRLQAVNRRLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTSLANDTSCESNV 146

Query: 183 CGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKP 224
              P AI + S     L +      E + + +  A  +V  P
Sbjct: 147 TAPPNAIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMP 188


>gi|242051699|ref|XP_002454995.1| hypothetical protein SORBIDRAFT_03g002660 [Sorghum bicolor]
 gi|241926970|gb|EES00115.1| hypothetical protein SORBIDRAFT_03g002660 [Sorghum bicolor]
          Length = 844

 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 123/536 (22%), Positives = 218/536 (40%), Gaps = 106/536 (19%)

Query: 301 WMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVN 358
           +++   GTA    +   ++  P  IG       C   A+R   +V M    + E+L D  
Sbjct: 172 FLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEVLKDRL 231

Query: 359 QWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHG 418
            W       +    ++EV++   AGN NG ++++  +   P+ L P R+ + +RY     
Sbjct: 232 LW-------LRDCRSMEVVNVLPAGN-NGTIELLYLQLYAPTTLAPARDFWLLRYTSILD 283

Query: 419 EGTWAVVDVSLDNLR--PS-----PAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG 471
           +G+  V + SL   +  PS     P +R    PSG LI+    G S +  V+H++++   
Sbjct: 284 DGSLVVCERSLSTKQGGPSMPLVQPFIRGEMLPSGFLIRPSDGGGSVIHIVDHIDLEPWS 343

Query: 472 VHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK--SMLK 529
           V  + + L  +      K  +A L R   ++A     ++ TG         GR+  ++  
Sbjct: 344 VPEVVRPLYESSAMVAQKMSMAAL-RYLRQVAHEDTHSVITGW--------GRQPAALRA 394

Query: 530 LAERMVISFCAGVSASTAHTWTTLSGTGADDV---------RVMTRKSVDDPGRP--PGI 578
           L++++   F   ++      W+ +   G DDV         +V+   +  + G P     
Sbjct: 395 LSQKLTRGFNEALNGLADDGWSVVESDGVDDVCISVNSSPSKVINCNATFNNGLPVVSSS 454

Query: 579 VLSAATSFWLP-VPPKRVFDFLRDENTRSEW-----DIL-------------------SN 613
           VL A  S  L  V P  +  F+R++  RS+W     D                      +
Sbjct: 455 VLCAKASMLLQDVSPPALLRFMREQ--RSQWADSNLDAFFASAMKPNFCNLPMSRLGGFS 512

Query: 614 GGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTDP----TASFVIYA 669
           G V+  +AH  +  +    + L   +  Q A   +   L+   +  D     T S +I+A
Sbjct: 513 GQVILPLAHTFDPEEFLEVIKLGNASNYQDALLHRDLFLLQMYNGVDENMVGTCSELIFA 572

Query: 670 PVDIVAMNVVLNGGDPDYVALLPSGFAILP-----DGTS-------------------LH 705
           P+D             D   LLPSGF I+P     D +S                   ++
Sbjct: 573 PID---------ASFSDDSPLLPSGFRIIPIDAPLDTSSPKCTLDLASTLEVGTPRSRIN 623

Query: 706 GANIGEAASGGS--LLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           G+  G AAS GS  ++T+ FQ   +S     ++  +   + ++IA +V+RI  +LS
Sbjct: 624 GSGPGNAASAGSKAVMTIVFQFAFESHLQDSVAAMARQYMRSIIA-SVQRIALALS 678



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L R+      ++P Q+K WFQN+R + K  
Sbjct: 16  KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRDCPVLASVDPKQIKVWFQNRRCREK-- 73

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E+++L+  N KL A N
Sbjct: 74  -QRKESSRLQALNRKLTAMN 92


>gi|414864316|tpg|DAA42873.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 602

 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 127/303 (41%), Gaps = 37/303 (12%)

Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
           GI     G +  A+R   +V +    ++EIL D   W            +LEV +   AG
Sbjct: 198 GIVAISHGCRGVAARACGLVNLEPTKVIEILKDRPSW-------FRDCRSLEVFTMFPAG 250

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP------- 436
           N  G ++++  +   P+ LVP R+ + +RY     +G+  V + SL      P       
Sbjct: 251 N-GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLTGSGGGPNAASAQQ 309

Query: 437 AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD 496
            VR    PSG L++    G S V  V+H++++   V  + + L  +      K     L 
Sbjct: 310 FVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVAL- 368

Query: 497 RQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLS 554
           R   ++A   +        G +    GR+   +   ++R+   F   +S      W+ + 
Sbjct: 369 RHLRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMG 420

Query: 555 GTGADDVRVM---TRKSVDDP------GRPPGIVLSAATSFWLPVPPKRVFDFLRDENTR 605
           G G +DV V    T+K  ++       G P GI+ + A+     VPP  +  FLR+   R
Sbjct: 421 GDGIEDVVVACNSTKKIRNNSNAGITFGAPGGIICAKASMLLQSVPPAVLVRFLREH--R 478

Query: 606 SEW 608
           SEW
Sbjct: 479 SEW 481



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 27  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQNRRCRDK-- 84

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E+++L+  N KL A N
Sbjct: 85  -QRKESSRLQAVNRKLTAMN 103


>gi|18076740|emb|CAC84277.1| HD-Zip protein [Zinnia violacea]
          Length = 849

 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 192/473 (40%), Gaps = 84/473 (17%)

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNH 347
           L+ +A+     +++   GTA    +   ++  P  +G       C   A+R   +V +  
Sbjct: 164 LLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEP 223

Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
             +VEIL D   W             LEV +   AGN  G ++++  +   P+ L P R+
Sbjct: 224 TKIVEILKDRPSW-------FRDCRNLEVFTMFPAGN-GGTIELVYTQIFAPTTLAPARD 275

Query: 408 SYYVRYCKQHGEGTWAVVDVSLDN--LRPSPA-----VRCRRRPSGCLIQEMPNGYSKVT 460
            + +RY      G+  V + SL      P+PA     VR    PSG LI+    G S V 
Sbjct: 276 FWTLRYTTTLENGSLVVCERSLSGSGAGPNPAAASQFVRGEMLPSGYLIRPCEGGGSIVH 335

Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEV--GVI 518
            V+H+ ++   V  + + L  +      K  +A L R   ++A        +GEV  GV 
Sbjct: 336 IVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAAL-RYIRQIAQE-----SSGEVVYGV- 388

Query: 519 TNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMT------RKSVD 570
               GR+   +  L++R+   F   V+  +   W+ ++  GA+DV V          S++
Sbjct: 389 ----GRQPAVLRTLSQRLSRGFNDAVNGFSDDGWSLMNCDGAEDVIVAVNSTKNLNNSMN 444

Query: 571 DPGRPP---GIVLSAATSFWLPVPPKRVFDFLRDENTRSEW-----DILSNGGVVQEMAH 622
               PP   GI+ + A+  +  VPP  +  FLR+   RSEW     D  S   V     +
Sbjct: 445 SSTSPPYLGGIICAKASMLFENVPPGVLVRFLREH--RSEWADFNVDAYSAASVKANPYN 502

Query: 623 IANG----RDTGNCV-----------SLLRVNCLQSANSSQSNMLI-----LQESCTD-- 660
              G    R TG+ +            +L V  L+     Q +  +     L + C    
Sbjct: 503 TYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGQALGQEDPFMSRDIHLLQLCNGID 562

Query: 661 ----PTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-DGTSLHGAN 708
                  S +I+AP+D +          PD   L+PSGF I+P D  S+   N
Sbjct: 563 ENSVGACSELIFAPIDEMF---------PDDAPLIPSGFRIIPLDPKSVDAKN 606



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 14/101 (13%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 29  KYVRYTTEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86

Query: 149 HERHENTQLRTENEKLRA-------DNMRYREALSNASCPN 182
            +R E+++L+T N+KL A       +N R ++ +S   C N
Sbjct: 87  -QRKESSRLQTVNKKLSAMNKLLMEENDRLQKQVSQLVCEN 126


>gi|24417151|dbj|BAC22514.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 848

 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 192/473 (40%), Gaps = 84/473 (17%)

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNH 347
           L+ +A+     +++   GTA    +   ++  P  +G       C   A+R   +V +  
Sbjct: 163 LLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEP 222

Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
             +VEIL D   W             LEV +   AGN  G ++++  +   P+ L P R+
Sbjct: 223 TKIVEILKDRPSW-------FRDCRNLEVFTMFPAGN-GGTIELVYTQIFAPTTLAPARD 274

Query: 408 SYYVRYCKQHGEGTWAVVDVSLDN--LRPSPA-----VRCRRRPSGCLIQEMPNGYSKVT 460
            + +RY      G+  V + SL      P+PA     VR    PSG LI+    G S V 
Sbjct: 275 FWTLRYTTTLENGSLVVCERSLSGSGAGPNPAAASQFVRGEMLPSGYLIRPCEGGGSIVH 334

Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEV--GVI 518
            V+H+ ++   V  + + L  +      K  +A L R   ++A        +GEV  GV 
Sbjct: 335 IVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAAL-RYIRQIAQE-----SSGEVVYGV- 387

Query: 519 TNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMT------RKSVD 570
               GR+   +  L++R+   F   V+  +   W+ ++  GA+DV V          S++
Sbjct: 388 ----GRQPAVLRTLSQRLSRGFNDAVNGFSDDGWSLMNCDGAEDVIVAVNSTKNLNNSMN 443

Query: 571 DPGRPP---GIVLSAATSFWLPVPPKRVFDFLRDENTRSEW-----DILSNGGVVQEMAH 622
               PP   GI+ + A+  +  VPP  +  FLR+   RSEW     D  S   V     +
Sbjct: 444 SSTSPPYLGGIICAKASMLFENVPPGVLVRFLREH--RSEWADFNVDAYSAASVKANPYN 501

Query: 623 IANG----RDTGNCV-----------SLLRVNCLQSANSSQSNMLI-----LQESCTD-- 660
              G    R TG+ +            +L V  L+     Q +  +     L + C    
Sbjct: 502 TYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGQALGQEDPFMSRDIHLLQLCNGID 561

Query: 661 ----PTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-DGTSLHGAN 708
                  S +I+AP+D +          PD   L+PSGF I+P D  S+   N
Sbjct: 562 ENSVGACSELIFAPIDEMF---------PDDAPLIPSGFRIIPLDPKSVDAKN 605



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 14/101 (13%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 28  KYVRYTTEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 85

Query: 149 HERHENTQLRTENEKLRA-------DNMRYREALSNASCPN 182
            +R E+++L+T N+KL A       +N R ++ +S   C N
Sbjct: 86  -QRKESSRLQTVNKKLSAMNKLLMEENDRLQKQVSQLVCEN 125


>gi|334847844|gb|AEH04618.1| homeodomain leucine zipper family IV protein [Zea mays]
          Length = 64

 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/45 (88%), Positives = 43/45 (95%)

Query: 718 LLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           LLTVAFQILVDSVPTAKLSLGSVATVN+LIA TVERIKA++S ES
Sbjct: 16  LLTVAFQILVDSVPTAKLSLGSVATVNSLIARTVERIKAAVSGES 60


>gi|449435534|ref|XP_004135550.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Cucumis
           sativus]
          Length = 844

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 119/549 (21%), Positives = 206/549 (37%), Gaps = 117/549 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q+  +E  + ECP P   +R++L RE      +EP Q+K WF         Q
Sbjct: 18  KYVRYTPEQVDALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWF---------Q 68

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEH--------HLR 200
           + R    Q R E  +L+  N +                TA+ ++  +E+         L 
Sbjct: 69  NRRCREKQ-RKEASRLQTVNRKL---------------TAMNKLLMEENDRLQTQVSRLV 112

Query: 201 LENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYG 260
            EN  +R+++   S        + VV                               M G
Sbjct: 113 YENGYMRQQLHTASGTTTDNSCESVV-------------------------------MSG 141

Query: 261 AADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRT 320
                ++ +  T+ D      L   A E L          +++   GTA    +   ++ 
Sbjct: 142 QQHQQQNPTKHTQKDANNPAGLLAIAEETLAE--------FLSKATGTAVDWVQMIGMKP 193

Query: 321 FPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLS 378
            P  IG       C   A+R   +V +  + + EIL D   W             ++VLS
Sbjct: 194 GPDSIGIVAVSRNCNGVAARACGLVSLEPMKVAEILKDRLSW-------FRDCRCVDVLS 246

Query: 379 TGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA- 437
               GN  G ++++  +   P+ L   R+ + +RY     +G+  + + SL +    P+ 
Sbjct: 247 VISTGN-GGTIELLYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPSG 305

Query: 438 ------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRW 491
                 VR    PSG LI+    G S +  V+HV++D   V  + + L  +      +  
Sbjct: 306 PPPSSFVRAEMLPSGYLIRACEGG-SLIHIVDHVDLDVWSVPEVLRPLYESTKILAQRTT 364

Query: 492 VATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHT 549
           VA L R   ++A   +  +  G         GR+   +   ++R+   F   V+      
Sbjct: 365 VAAL-RYVRQIAQEASGEVQLG--------GGRQPAVLRTFSQRLCRGFNDAVNGFVDDG 415

Query: 550 WTTLSGTGADDVRVMTRKSVD-------DPGRPP---GIVLSAATSFWLPVPPKRVFDFL 599
           W+ +   G +DV V+   S +       +    P   G++ + A+     VPP  +  FL
Sbjct: 416 WSLMDSDGVEDVTVVINSSPNKFLGSQYNTSLYPTFGGVLCAKASMLLQNVPPALLVRFL 475

Query: 600 RDENTRSEW 608
           R+   RSEW
Sbjct: 476 REH--RSEW 482


>gi|449488526|ref|XP_004158070.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Cucumis
           sativus]
          Length = 844

 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 121/549 (22%), Positives = 208/549 (37%), Gaps = 117/549 (21%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q+  +E  + ECP P   +R++L RE      +EP Q+K WF         Q
Sbjct: 18  KYVRYTPEQVDALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWF---------Q 68

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEH--------HLR 200
           + R    Q R E  +L+  N +                TA+ ++  +E+         L 
Sbjct: 69  NRRCREKQ-RKEASRLQTVNRKL---------------TAMNKLLMEENDRLQTQVSRLV 112

Query: 201 LENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYG 260
            EN  +R+++   S        + VV                               M G
Sbjct: 113 YENGYMRQQLHTASGTTTDNSCESVV-------------------------------MSG 141

Query: 261 AADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRT 320
                ++ +  T+ D      L   A E L          +++   GTA    +   ++ 
Sbjct: 142 QQHQQQNPTKHTQKDANNPAGLLAIAEETLAE--------FLSKATGTAVDWVQMIGMKP 193

Query: 321 FPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLS 378
            P  IG       C   A+R   +V +  + + EIL D   W             ++VLS
Sbjct: 194 GPDSIGIVAVSRNCNGVAARACGLVSLEPMKVAEILKDRLSW-------FRDCRCVDVLS 246

Query: 379 TGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLD-------N 431
               GN  G ++++  +   P+ L   R+ + +RY     +G+  + + SL         
Sbjct: 247 VISTGN-GGTIELLYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTLSTGGPSG 305

Query: 432 LRPSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRW 491
             PS  VR    PSG LI+    G S +  V+HV++D   V  + + L  +      +  
Sbjct: 306 PPPSSFVRAEMLPSGYLIRACEGG-SLIHIVDHVDLDVWSVPEVLRPLYESTKILAQRTT 364

Query: 492 VATLDRQCERLASVMATNIPTGEVGVITNQDGRK-SMLK-LAERMVISFCAGVSASTAHT 549
           VA L R   ++A   +  +  G         GR+ ++L+  ++R+   F   V+      
Sbjct: 365 VAAL-RYVRQIAQEASGEVQLG--------GGRQPAVLRTFSQRLCRGFNDAVNGFVDDG 415

Query: 550 WTTLSGTGADDVRVMTRKSVD-------DPGRPP---GIVLSAATSFWLPVPPKRVFDFL 599
           W+ +   G +DV V+   S +       +    P   G++ + A+     VPP  +  FL
Sbjct: 416 WSLMDSDGVEDVTVVINSSPNKFLGSQYNTSLYPTFGGVLCAKASMLLQNVPPALLVRFL 475

Query: 600 RDENTRSEW 608
           R+   RSEW
Sbjct: 476 REH--RSEW 482


>gi|110349554|gb|ABG73252.1| class III HD-Zip protein HDZ33 [Ginkgo biloba]
          Length = 776

 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 153/700 (21%), Positives = 254/700 (36%), Gaps = 165/700 (23%)

Query: 137 WFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDE 196
           WFQN+R + K   +R E ++L+T N KL A N    E                  +    
Sbjct: 1   WFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQV 43

Query: 197 HHLRLENARLREEIDRISAIAAKYVGKPVVNY-PLLSPPVPSRPLELAVGNFGAQPGIGG 255
             L  EN  LR++I   S        + VV   P      P  P                
Sbjct: 44  SQLVYENGYLRQQIQTASIATTDTSCESVVTSGPHQHHLTPQHP---------------- 87

Query: 256 GEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNED 315
                          P +A    ++ +A   + + +  A            GTA    + 
Sbjct: 88  ---------------PRDASPAGLLSIAEETLTQFLSKAT-----------GTAVDWIQM 121

Query: 316 EYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMT 373
             ++  P  IG       C   ASR   +V +    + EIL D   W       +     
Sbjct: 122 PGMKPGPDSIGIVAISHSCTGVASRACGLVGLESSKVAEILKDRPSW-------LRDCRC 174

Query: 374 LEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR 433
           L+VL+    GN  G ++++  +   P+ L   R+ + +RY     +G+  V + SL   +
Sbjct: 175 LDVLTAFPTGN-GGTIELLYTQMYAPTTLASARDIWTLRYTSVLEDGSLVVCERSLTGTQ 233

Query: 434 PSP-------AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAF 486
             P        VR    PSG LI+    G S +  V+H++++   V  + + L  +    
Sbjct: 234 GGPNMPSVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVIRPLYESSTVL 293

Query: 487 GAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSA 544
             K  ++ L R   ++A  ++  +  G         GR+  ++   ++R+   F   V+ 
Sbjct: 294 AQKMTISAL-RHLRQVAQEVSGEVVLGW--------GRQPAALRAFSQRLGRGFNEAVNG 344

Query: 545 STAHTWTTLSGTGADDVRVMTRKS-----------VDDPGRPPGIVLSAATSFWLP-VPP 592
            T   W+ L   G DDV +    S            D      G +L A  S  L  VPP
Sbjct: 345 FTDDGWSLLGNDGMDDVTIAINSSPSKLLASQLAASDGLAALGGGILCAKASMLLQNVPP 404

Query: 593 KRVFDFLRDENTRSEW-----DILSN--------------GGV-----VQEMAHIANGRD 628
             +  FLR+   RSEW     D  S+              GGV     +  +AH     +
Sbjct: 405 ALLVRFLREH--RSEWADCNIDAYSSAAMKANPYSIPSSRGGVFGSQVILPLAHTMEHEE 462

Query: 629 TGNCVSLLRVNCLQSANSSQSNMLILQE-SCTDPTA----SFVIYAPVDIVAMNVVLNGG 683
               + L              +M +LQ  S  D  A    + +++AP+D           
Sbjct: 463 FLEVIKLEGHGLTHEETVLSRDMFLLQLCSGIDENAVGCCAQLVFAPID---------AS 513

Query: 684 DPDYVALLPSGFAILP-----DGT----SLHGANIGEAASGG---------------SLL 719
             D   LLPSGF ++P     DG+    +L  A+  +  S G               S+L
Sbjct: 514 FADDAPLLPSGFRVIPLDSGTDGSTPNRTLDLASALDVGSAGTRTSGDYGSSTYNMRSVL 573

Query: 720 TVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           T+AFQ   ++     ++  +   V +++A +V+R+  +L+
Sbjct: 574 TIAFQFTYETHLRDNVAAMARQYVRSVVA-SVQRVAMALA 612


>gi|317160486|gb|ADV04325.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 851

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGL----EPLQVKFWFQNKRTQMKTQ 148
           +Y R+T+ Q+Q +E F+ ECP P+  +R++L RE  L    EP Q+K WFQN+R + K  
Sbjct: 17  KYVRYTEEQVQALEKFYSECPKPNAFRRQQLIRECPLLSNIEPKQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E T+L   NEKL+A N
Sbjct: 75  -QRKEATRLLALNEKLKAMN 93


>gi|312282957|dbj|BAJ34344.1| unnamed protein product [Thellungiella halophila]
          Length = 844

 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 114/511 (22%), Positives = 198/511 (38%), Gaps = 104/511 (20%)

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C   A+R   +V +  + +VEIL D   W             +E LS 
Sbjct: 202 PDSIGIVAVSRNCSGIAARACGLVSLEPMKVVEILKDRPSW-------FRDCRCVETLSV 254

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP--- 436
              GN  G ++++  +   P+ L   R+ + +RY     +G++ V + SL +    P   
Sbjct: 255 IPTGN-GGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVVCEKSLTSATGGPNGP 313

Query: 437 ----AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                VR +   SG LI+    G S +  V+HV++D   V  + + L  +      K  V
Sbjct: 314 LSSSFVRAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTV 373

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTW 550
           A L R   ++A   +        G +    GR+   +   ++R+   F   V+      W
Sbjct: 374 AAL-RHVRQIAQETS--------GEVQYSGGRQPAVLRTFSQRLCRGFNDAVNGFADDGW 424

Query: 551 TTLSGTGADDVRVMTRKSVDD-----------PGRPPGIVLSAATSFWLPVPPKRVFDFL 599
           + +S  G +D+ +M   S              P    G++ + A+     VPP  +  FL
Sbjct: 425 SPMSSDGGEDITIMINSSSAKFAGSQYGNSFLPSFGSGVLCAKASMLLQNVPPLVLIRFL 484

Query: 600 RDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCT 659
           R+   R+EW   ++ GV  +    A+ R T   V  +R           SN +IL  + T
Sbjct: 485 REH--RAEW---ADYGV--DAYSAASLRATPFAVPCVRTGGF------PSNQVILPLAQT 531

Query: 660 DPTASFV--------IYAPVDI--------------VAMNVV----------LNGGDPDY 687
                F+         Y+P D+              V  NVV          ++    D 
Sbjct: 532 LEHEEFLEVVRLGGHAYSPEDMGLSRDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADD 591

Query: 688 VALLPSGFAILP------------------DGTSLHGANIGEAASGGSL-LTVAFQILVD 728
             LLPSGF ++P                    +SL G+   ++ +   L LT+AFQ   D
Sbjct: 592 APLLPSGFRVIPLEQKTTPSDHVSANRTRDLASSLDGSTKTDSETNSRLVLTIAFQFTFD 651

Query: 729 SVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           +     ++  +   V N++  +++R+  +++
Sbjct: 652 NHSRDNVATMARQYVRNVVG-SIQRVALAIT 681



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 10/93 (10%)

Query: 83  DQEQRPNK---KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQVK 135
           D    P+K     +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K
Sbjct: 11  DDRDSPDKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIK 70

Query: 136 FWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
            WFQN+R + K   +R E+ +L+T N KL A N
Sbjct: 71  VWFQNRRCREK---QRKESARLQTVNRKLSAMN 100


>gi|63095203|gb|AAY32332.1| HB1 [Phyllostachys praecox]
          Length = 824

 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 99/446 (22%), Positives = 167/446 (37%), Gaps = 77/446 (17%)

Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
           GI     G +  A+R   +V +    +VEIL D   W            +LEV +   AG
Sbjct: 182 GIVAISHGCRGVAARACDLVNLEPTKVVEILKDRPSW-------FCDRQSLEVFTMFPAG 234

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA------ 437
           N  G ++++  +   P+ LVP R+ + +RY     +G+  V + SL      P+      
Sbjct: 235 N-GGTIELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQ 293

Query: 438 -VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD 496
            VR    PSG L++    G S V  V+H++++   V  + + L  +      K   A L 
Sbjct: 294 FVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAAL- 352

Query: 497 RQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLS 554
           R   ++A   +        G +    GR+   +   ++R+   F   +S      W+ + 
Sbjct: 353 RHIRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMG 404

Query: 555 GTGADDVRVMTRK--------SVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRS 606
           G G +DV +            + +  G P G++ + A+     VPP  +  FLR+   RS
Sbjct: 405 GDGIEDVIIACNSKKIRNNSTAANAFGAPGGVICAKASMLLQSVPPAVLVRFLREH--RS 462

Query: 607 EW-------------------------DILSNGGVVQEMAHIANGRDTGNCVSLLRVNCL 641
           EW                            S   ++  +AH     +    +  L    L
Sbjct: 463 EWADYNFDAYSALALKTSSCSLPGLRPTRFSGSQIIMPLAHTVENEEILEVIR-LEGQAL 521

Query: 642 QSANSSQSNMLILQESCTD------PTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGF 695
                  S  + L + CT        +   +++AP+D +          PD   L+ SGF
Sbjct: 522 THDEGLLSRDIHLLQLCTGIDEKSMGSCFQLVFAPIDELF---------PDDAPLISSGF 572

Query: 696 AILPDGTSLHGANIGEAASGGSLLTV 721
            ++P      GA  G      S L V
Sbjct: 573 RVIPLDMKTDGAPTGRTLDLASSLEV 598



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 12  KYVRYTPEQVEALERMYAECPKPSSTRRQQLLRECPILANIEPKQIKVWFQNRRCRDK-- 69

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L+  N KL A N
Sbjct: 70  -QRKEASRLQAVNRKLTAMN 88


>gi|110349512|gb|ABG73231.1| class III HD-Zip protein HDZ31 [Selaginella kraussiana]
          Length = 825

 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 182/454 (40%), Gaps = 90/454 (19%)

Query: 336 ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 395
           A+R   +V +    + EIL D   W             LEVL      N  G ++++  +
Sbjct: 216 AARAWGLVGLEPSKVAEILKDRPSWH-------RECRRLEVLRAFSTPN-GGTVELVYTQ 267

Query: 396 FQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA--------VRCRRRPSGC 447
              P+ L   R+ + +RY     +G   + + SL+ +   P+        VR    PSG 
Sbjct: 268 MYAPTTLAAGRDFWTIRYTSFLEDGL-VICERSLNGIHGGPSNKQSGSDFVRAEMLPSGY 326

Query: 448 LIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMA 507
           LI+    G   +  V+H+E++   V  + + L  + +    K  +A L R   RL  V  
Sbjct: 327 LIRPYEGGMCSIHIVDHMELESWKVLEVLRPLYESSSVLAQKMTLAAL-RYLRRL--VYE 383

Query: 508 TNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTR- 566
           +++  G   +        +   ++ R+   F   V+  T   W+TL   G +DV V    
Sbjct: 384 SSVERGAQQI-------AAWRGVSRRIARGFNEAVNCFTDDGWSTLVTDGVEDVTVAINT 436

Query: 567 -----------KSVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEWDI--LS 612
                       S D      G VL A  S  L  VPP  +  FLR+   RSEW    ++
Sbjct: 437 NPTASSIGGQLASADRLYAVGGGVLCAKASMLLQNVPPATLIRFLREH--RSEWADCNIT 494

Query: 613 NGGVVQEMAHIANGRDTGNCVSL---------LRVNCLQSANSSQSNMLILQES-----C 658
           +  +   MA  AN       V L         L V  L+   + Q+ +++ +E+     C
Sbjct: 495 DSSLRHGMARGANAFIGQYPVPLIHSSEEEEFLEVVKLEGHTTGQNGVILPRETVLLQLC 554

Query: 659 T--DPTA----SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEA 712
           +  D  A    + +++APVD             D V LLPSGF ++P  + L G  +  A
Sbjct: 555 SGNDDNAVGACAQLVFAPVDAAV---------SDDVPLLPSGFHVIPLDSGLDGRTLDLA 605

Query: 713 AS--GG---------------SLLTVAFQILVDS 729
           +S  GG               S+LT+AFQ L ++
Sbjct: 606 SSLEGGAEGGRFAEEPSCHLRSVLTMAFQFLFEA 639



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGL----EPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE  L    EP Q+K WFQN+R + K  
Sbjct: 2   KYVRYTPEQVEALERVYNECPKPSSIRRQQLLREYPLLANIEPRQIKVWFQNRRCREK-- 59

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L++ N  L A N
Sbjct: 60  -QRKETSRLQSVNSSLTAMN 78


>gi|89514853|gb|ABD75301.1| class III homeodomain-leucine zipper protein C3HDZ2 [Selaginella
           kraussiana]
          Length = 840

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 182/454 (40%), Gaps = 90/454 (19%)

Query: 336 ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 395
           A+R   +V +    + EIL D   W             LEVL      N  G ++++  +
Sbjct: 231 AARAWGLVGLEPSKVAEILKDRPSWH-------RECRRLEVLRAFSTPN-GGTVELVYTQ 282

Query: 396 FQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA--------VRCRRRPSGC 447
              P+ L   R+ + +RY     +G   + + SL+ +   P+        VR    PSG 
Sbjct: 283 MYAPTTLAAGRDFWTIRYTSFLEDGL-VICERSLNGIHGGPSNKQSGSDFVRAEMLPSGY 341

Query: 448 LIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMA 507
           LI+    G   +  V+H+E++   V  + + L  + +    K  +A L R   RL  V  
Sbjct: 342 LIRPYEGGMCSIHIVDHMELESWKVLEVLRPLYESSSVLAQKMTLAAL-RYLRRL--VYE 398

Query: 508 TNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTR- 566
           +++  G   +        +   ++ R+   F   V+  T   W+TL   G +DV V    
Sbjct: 399 SSVERGAQQI-------AAWRGVSRRIARGFNEAVNCFTDDGWSTLVTDGVEDVTVAINT 451

Query: 567 -----------KSVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEWDI--LS 612
                       S D      G VL A  S  L  VPP  +  FLR+   RSEW    ++
Sbjct: 452 NPTASSIGGQLASADRLYAVGGGVLCAKASMLLQNVPPATLIRFLREH--RSEWADCNIT 509

Query: 613 NGGVVQEMAHIANGRDTGNCVSL---------LRVNCLQSANSSQSNMLILQES-----C 658
           +  +   MA  AN       V L         L V  L+   + Q+ +++ +E+     C
Sbjct: 510 DSSLRHGMARGANAFIGQYPVPLIHSSEEEEFLEVVKLEGHTTGQNGVILPRETVLLQLC 569

Query: 659 T--DPTA----SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEA 712
           +  D  A    + +++APVD             D V LLPSGF ++P  + L G  +  A
Sbjct: 570 SGNDDNAVGACAQLVFAPVDAAV---------SDDVPLLPSGFRVIPLDSGLDGRTLDLA 620

Query: 713 AS--GG---------------SLLTVAFQILVDS 729
           +S  GG               S+LT+AFQ L ++
Sbjct: 621 SSLEGGAEGGRFAEEPSCHLRSVLTMAFQFLFEA 654



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGL----EPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE  L    EP Q+K WFQN+R + K  
Sbjct: 17  KYIRYTPEQVEALERVYNECPKPSSIRRQQLLREYPLLANIEPRQIKVWFQNRRCREK-- 74

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L++ N  L A N
Sbjct: 75  -QRKETSRLQSVNSSLTAMN 93


>gi|357453943|ref|XP_003597252.1| Homeobox leucine-zipper protein [Medicago truncatula]
 gi|355486300|gb|AES67503.1| Homeobox leucine-zipper protein [Medicago truncatula]
          Length = 839

 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 148/674 (21%), Positives = 256/674 (37%), Gaps = 150/674 (22%)

Query: 84  QEQRPNKKKR-------YHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPL 132
           Q+QR N  +R       Y R+T  QI+ +E  + ECP P   +R++L RE      +EP 
Sbjct: 7   QQQRDNSIERHLDSSGKYVRYTAEQIEALEKVYVECPKPSSLRRQQLIRECPVLANIEPK 66

Query: 133 QVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEM 192
           Q+K WF         Q+ R    Q R E  +L++ N +                      
Sbjct: 67  QIKVWF---------QNRRCREKQ-RKEASQLQSVNRK---------------------- 94

Query: 193 SFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPG 252
                 L   N  L EE +R+    ++ V +       L P  P+ P             
Sbjct: 95  ------LSAMNKLLMEENERLQKQVSQLVNENGFMRQQLHP-TPAAP-----------NA 136

Query: 253 IGGGEMYGAADLLRSISAPTEADKPM-IIELAVAAMEELIRMAQMGEPLWMTSLDGTAAV 311
            G G    AA  + S+    +A+ P   + +A   + E +  A            GTA  
Sbjct: 137 DGSGVDSAAAAPMNSLR---DANSPAGFLSIAEETLTEFLSKAT-----------GTAVD 182

Query: 312 LNEDEYVRTFPRGIG--PKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVS 369
             +   ++  P  +G      G    A+R   +V +    +VEIL D   W         
Sbjct: 183 WVQMPGMKPGPDSVGIFAISQGGNGVAARACGLVSLEPTKIVEILKDRPTW-------YR 235

Query: 370 RAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL 429
              + EV +   AGN  G ++++  +   P  L   R+ + +RY      G+  V + SL
Sbjct: 236 DCRSSEVFTMFPAGN-GGTIELVYTQTYAPMTLASARDFWTLRYTTNLENGSVVVCERSL 294

Query: 430 DNLRPSPAV-------RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVST 482
                 P         R    PSG LI+    G S +  V+H+ +    V  + + +  +
Sbjct: 295 SGTGAGPNAAAASQFERAEMLPSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVLRPIYES 354

Query: 483 GNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAG 541
                 +  +A L R   ++A   + +       V+ +   + ++L+  ++R+   F   
Sbjct: 355 SQMVAQRLTIAAL-RYIRQVAQETSGD-------VVYSMGRQPAVLRTFSQRLSRGFNDA 406

Query: 542 VSASTAHTWTTLSGTGADDVRVMTR--KSVDDPGRPP-------GIVLSAATSFWLPVPP 592
           V+    + W+ L+  GA+ V +     K++     P        GIV + A+       P
Sbjct: 407 VNGFNDNGWSVLNCDGAEGVTISVNSIKNLSGTSNPASSLSLLGGIVCAKASMLLQNTTP 466

Query: 593 KRVFDFLRDENTRSEWDILS----NGGVVQEMAH----IANGRDTGN------------- 631
             +  FLR+   RSEW   S    +   ++  ++    + + + TGN             
Sbjct: 467 AVLVRFLREH--RSEWADFSVDAFSAASLKAGSYGYPGMRSTKFTGNQAIMPLGHTIEHE 524

Query: 632 -CVSLLRVNCLQSANSSQSNMLILQESCT--DPTA----SFVIYAPVDIVAMNVVLNGGD 684
             + ++R+  L   +S  S  + L + CT  D  A    S +I+AP+D +          
Sbjct: 525 EMLEIIRLEGLAQDDSFVSRDVHLLQLCTGIDENAVGACSELIFAPIDDMF--------- 575

Query: 685 PDYVALLPSGFAIL 698
           P+   L+PSGF I+
Sbjct: 576 PEDAPLVPSGFRIV 589


>gi|297851492|ref|XP_002893627.1| hypothetical protein ARALYDRAFT_473277 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339469|gb|EFH69886.1| hypothetical protein ARALYDRAFT_473277 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 840

 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 113/511 (22%), Positives = 198/511 (38%), Gaps = 104/511 (20%)

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C   A+R   +V +  + + EIL D   W             +E L+ 
Sbjct: 198 PDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILKDRPSW-------FRDCRCVETLNV 250

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP--- 436
              GN  G ++++  +   P+ L   R+ + +RY     +G++ V + SL +    P   
Sbjct: 251 IPTGN-GGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATGGPNGP 309

Query: 437 ----AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                VR +   SG LI+    G S +  V+HV++D   V  + + L  +      K  V
Sbjct: 310 LSSSFVRAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTV 369

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTW 550
           A L R   ++A   +        G +    GR+   +   ++R+   F   V+      W
Sbjct: 370 AAL-RHVRQIAQETS--------GEVQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGW 420

Query: 551 TTLSGTGADDVRVMTRKSVDD-----------PGRPPGIVLSAATSFWLPVPPKRVFDFL 599
           + +S  GA+D+ +M   S              P    G++ + A+     VPP  +  FL
Sbjct: 421 SPMSSDGAEDITIMINSSSAKFAGSQYGSSFLPSFGSGVLCAKASMLLQNVPPLVLIRFL 480

Query: 600 RDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCT 659
           R+   R+EW   ++ GV  +    A+ R T   V  +R           SN +IL  + T
Sbjct: 481 REH--RAEW---ADYGV--DAYSAASLRATPFTVPCVRTGGF------PSNQVILPLAQT 527

Query: 660 DPTASFV--------IYAPVDI--------------VAMNVV----------LNGGDPDY 687
                F+         Y+P D+              V  NVV          ++    D 
Sbjct: 528 LEHEEFLEVVRLGGHAYSPEDMGLSRDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADD 587

Query: 688 VALLPSGFAILP------------------DGTSLHGANIGEAASGGSL-LTVAFQILVD 728
             LLPSGF ++P                    +SL G+   ++ +   L LT+AFQ   D
Sbjct: 588 APLLPSGFRVIPLDQKTNPNDHQSASRTRDLASSLDGSTKTDSETNSRLVLTIAFQFTFD 647

Query: 729 SVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           +     ++  +   V N++  +++R+  +++
Sbjct: 648 NHSRDNVATMARQYVRNVVG-SIQRVALAIT 677



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 10/93 (10%)

Query: 83  DQEQRPNK---KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQVK 135
           D    P+K     +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K
Sbjct: 7   DDRDSPDKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIK 66

Query: 136 FWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
            WFQN+R + K   +R E+ +L+T N KL A N
Sbjct: 67  VWFQNRRCREK---QRKESARLQTVNRKLSAMN 96


>gi|169730542|gb|ACA64837.1| SKIP interacting protein 22 [Oryza sativa]
          Length = 855

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 118/513 (23%), Positives = 192/513 (37%), Gaps = 106/513 (20%)

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNH 347
           L+ +A+     +M+   GTA    +   ++  P  IG       C   A+R   +V +  
Sbjct: 175 LLAIAEETLAEFMSKATGTAVEWVQMVGMKPGPDSIGIITVSHNCSGVAARACGLVSLEP 234

Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
             + EIL D   W             ++++     GN  G ++++  +   P+ L   R+
Sbjct: 235 TKVAEILKDRPSW-------YRDCRCVDIIHVIPTGN-GGTIELIYMQTHAPTTLAAPRD 286

Query: 408 SYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVT 460
            + +RY     +G+  + + SL      P+       +R    PSG LI+    G S + 
Sbjct: 287 FWTLRYTSGLEDGSLVICERSLTQSTGGPSGPNTLNFIRAEVLPSGYLIRPCEGGGSMIY 346

Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITN 520
            V+HV++D   V  + + L  +      K  +A L R   ++A   +  IP G       
Sbjct: 347 IVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAAL-RHIRQIAHESSGEIPYGA------ 399

Query: 521 QDGRKSML--KLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKS----VDDPGR 574
             GR+  +    ++R+   F   VS      W+ LS  G++D+ +    S    V     
Sbjct: 400 --GRQPAVFRTFSQRLSRGFNDAVSGFPDDGWSLLSSDGSEDITISVNSSPNKLVGSHVS 457

Query: 575 PP--------GIVLSAATSFWLPVPPKRVFDFLRDENTRSEW-----DILSNGGVVQEMA 621
           P         GI+ + A+     VPP  +  FLR+   RSEW     D  S   +     
Sbjct: 458 PNPLFSTVGGGILCAKASMLLQNVPPALLVRFLREH--RSEWADPGVDAYSAASLRASPY 515

Query: 622 HIANGRDTGNCVS--------------LLRVNCLQSANSSQS------NMLILQ------ 655
            +   R +G   S               L V  L+    S        +M +LQ      
Sbjct: 516 AVPGLRTSGFMGSQVILPLAHTLEHEEFLEVIRLEGHGFSHDEVLLSRDMYLLQLCSGVD 575

Query: 656 ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHG--------- 706
           E+ T  +A  V +AP+D             D   LLPSGF ++P  T + G         
Sbjct: 576 ENATSASAQLV-FAPID---------ESFADDAPLLPSGFRVIPLDTKMDGPSATRTLDL 625

Query: 707 ANIGEAASGG--------------SLLTVAFQI 725
           A+  E   GG              S+LT+AFQ 
Sbjct: 626 ASALEVGPGGASRASVEASGTCNRSVLTIAFQF 658



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 29  KYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L+T N KL A N
Sbjct: 87  -QRKEASRLQTVNRKLNAMN 105


>gi|15239411|ref|NP_200877.1| homeobox-leucine zipper protein REVOLUTA [Arabidopsis thaliana]
 gi|75203823|sp|Q9SE43.2|REV_ARATH RecName: Full=Homeobox-leucine zipper protein REVOLUTA; AltName:
           Full=HD-ZIP protein REV; AltName: Full=Homeodomain
           transcription factor REV; AltName: Full=Protein
           AMPHIVASAL VASCULAR BUNDLE 1; AltName: Full=Protein
           INTERFASCICULAR FIBERLESS 1
 gi|7229679|gb|AAF42938.1|AF233592_1 REVOLUTA [Arabidopsis thaliana]
 gi|24416437|gb|AAF15262.2|AF188994_1 homeodomain-leucine zipper protein interfascicular fiberless 1
           [Arabidopsis thaliana]
 gi|9759333|dbj|BAB09842.1| Revoluta [Arabidopsis thaliana]
 gi|27413560|gb|AAO11835.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|110738992|dbj|BAF01416.1| REVOLUTA or interfascicular fiberless 1 [Arabidopsis thaliana]
 gi|332009984|gb|AED97367.1| homeobox-leucine zipper protein REVOLUTA [Arabidopsis thaliana]
          Length = 842

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 14/119 (11%)

Query: 75  NHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELG----LE 130
           NH   S D   +  +   +Y R+T  Q++ +E  + ECP P   +R++L RE      +E
Sbjct: 7   NHRERSSDSMNRHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIE 66

Query: 131 PLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRA-------DNMRYREALSNASCPN 182
           P Q+K WFQN+R + K   +R E ++L++ N KL A       +N R ++ +S   C N
Sbjct: 67  PKQIKVWFQNRRCRDK---QRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVCEN 122



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 106/456 (23%), Positives = 186/456 (40%), Gaps = 73/456 (16%)

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNH 347
           L+ +A+     +++   GTA    +   ++  P  +G      +C   A+R   +V +  
Sbjct: 158 LLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQRCNGVAARACGLVSLEP 217

Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
           + + EIL D   W            +LEV +   AGN  G ++++  +   P+ L P R+
Sbjct: 218 MKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-GGTIELVYMQTYAPTTLAPARD 269

Query: 408 SYYVRYCKQHGEGTWAVVDVSLDNLRPSP-------AVRCRRRPSGCLIQEMPNGYSKVT 460
            + +RY      G++ V + SL      P        VR     SG LI+    G S + 
Sbjct: 270 FWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQFVRAEMLSSGYLIRPCDGGGSIIH 329

Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITN 520
            V+H+ ++   V ++ + L  +      K  ++ L R   +LA         GE  V+  
Sbjct: 330 IVDHLNLEAWSVPDVLRPLYESSKVVAQKMTISAL-RYIRQLAQE-----SNGE--VVYG 381

Query: 521 QDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKS-----VDDPGR 574
              + ++L+  ++R+   F   V+      W+T+   GA+D+ V    +     + +   
Sbjct: 382 LGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWSTMHCDGAEDIIVAINSTKHLNNISNSLS 441

Query: 575 PPGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEW---DILSNGGVVQEMAHIAN----- 625
             G VL A  S  L  VPP  +  FLR+   RSEW   ++ +      +    A      
Sbjct: 442 FLGGVLCAKASMLLQNVPPAVLIRFLREH--RSEWADFNVDAYSAATLKAGSFAYPGMRP 499

Query: 626 GRDTGNCV-----------SLLRVNCLQSANSSQSNMLI-----LQESCT--DPTA---- 663
            R TG+ +            +L V  L+  + +Q +  +     L + CT  D  A    
Sbjct: 500 TRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVGAC 559

Query: 664 SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 699
           S +I+AP+         N   PD   L+PSGF ++P
Sbjct: 560 SELIFAPI---------NEMFPDDAPLVPSGFRVIP 586


>gi|187609457|sp|A2Z8L4.2|HOX9_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX9; AltName:
           Full=HD-ZIP protein HOX9; AltName: Full=Homeodomain
           transcription factor HOX9; AltName: Full=OsHB2; AltName:
           Full=OsHox9
          Length = 840

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 110/485 (22%), Positives = 180/485 (37%), Gaps = 105/485 (21%)

Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
           GI     G +  A+R   +V +    +VEIL D   W            +LEV +   AG
Sbjct: 200 GIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSW-------FRDCRSLEVFTMFPAG 252

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVD-------VSLDNLRPSP 436
           N  G ++++  +   P+ LVP R+ + +RY     +G+  V +                 
Sbjct: 253 N-GGTIELVYMQMYAPTTLVPARDFWTLRYTTTMDDGSLVVCERSLSGSGGGPSTASAQQ 311

Query: 437 AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD 496
            VR    PSG L++    G S V  V+H++++   V  + + L  +      K   A L 
Sbjct: 312 FVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAAL- 370

Query: 497 RQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLS 554
           R   ++A   +        G +    GR+   +   ++R+   F   +S      W+ + 
Sbjct: 371 RHIRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMG 422

Query: 555 GTGADDVRVM--------TRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRS 606
           G G +DV +         T  S +    P G++ + A+     VPP  +  FLR+   RS
Sbjct: 423 GDGIEDVIIACNAKKVRNTSTSANAFVTPGGVICAKASMLLQSVPPAVLVRFLREH--RS 480

Query: 607 EWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVSLLRVNCL 641
           EW                            S   ++  +AH     +    V  L    L
Sbjct: 481 EWADYNFDAYSASSLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVR-LEGQAL 539

Query: 642 QSANSSQSNMLILQESCTD------PTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGF 695
              +   S  + L + CT        +   +++AP+D +          PD   L+ SGF
Sbjct: 540 THDDGLMSRDIHLLQLCTGIDEKSMGSCFQLVFAPIDELF---------PDDAPLISSGF 590

Query: 696 AILP-----DGT----SLHGANIGEAASGG--------------SLLTVAFQI-----LV 727
            ++P     DGT    +L  A+  E  S                S+LT+AFQ      L 
Sbjct: 591 RVIPLDMKTDGTPAGRTLDLASSLEVGSTAQPTGDASMDDCNLRSVLTIAFQFPYEMHLQ 650

Query: 728 DSVPT 732
           DSV T
Sbjct: 651 DSVAT 655



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L R+      +EP Q+K WFQN+R + K  
Sbjct: 29  KYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCRDK-- 86

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L+  N KL A N
Sbjct: 87  -QRKEASRLQAVNRKLTAMN 105


>gi|326517046|dbj|BAJ96515.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 845

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 119/537 (22%), Positives = 222/537 (41%), Gaps = 113/537 (21%)

Query: 301 WMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVN 358
           +++   GTA    +   ++  P  IG       C   A+R   +V M    + +IL D  
Sbjct: 173 FLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVADILKDRP 232

Query: 359 QWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHG 418
            W       +    ++E+++   AG+ NG ++++  +   P+ L P R+ + +RY     
Sbjct: 233 LW-------LRDCRSMEIVNVLPAGS-NGTIELLYMQLYAPTTLAPARDFWLMRYTSILD 284

Query: 419 EGTWAVVDVSLDNLR--PS-----PAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG 471
           +G+  V + SL + +  PS     P VR    PSG LI+    G S +  V+H++++   
Sbjct: 285 DGSLVVCERSLSSKQGGPSMPLVQPFVRGEMLPSGFLIRPSDGGGSVIHIVDHLDLEPWS 344

Query: 472 VHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK--SMLK 529
           V  + + L  +      K  +A L R   ++A     ++ TG         GR+  ++  
Sbjct: 345 VPEVVRPLYESSAMVAQKMSMAAL-RYLRQVAHEDTHSVITGW--------GRQPAALRA 395

Query: 530 LAERMVISFCAGVSASTAHTWTTLSGTGADDV---------RVMTRKSVDDPGRP---PG 577
           L++++   F   +       W+ +   G DDV         ++M+  +    G P    G
Sbjct: 396 LSQKLTRGFNETLGGLADDGWSVIESDGVDDVCISVNSSPSKLMSCNATFSDGLPMVSTG 455

Query: 578 IVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILS------------------------N 613
           ++ + A+     V P  +  FLR+   RS+W   S                        +
Sbjct: 456 VLCAKASMLLQDVSPPSLLRFLREH--RSQWADSSLDAFFASALKPNFCNLPVSRLGGFS 513

Query: 614 GGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQS-----NMLILQ-----ESCTDPTA 663
           G V+  +AH  +  +       L V  + +A++ Q      ++ +LQ     +  T  T 
Sbjct: 514 GQVILPLAHTFDPEE------FLEVIKIGNASNYQDTLMHRDLFLLQMYNGVDENTIGTC 567

Query: 664 SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLH------------------ 705
           S +I+AP+D             D   LLPSGF I+P  + L                   
Sbjct: 568 SELIFAPID---------ASFSDDSPLLPSGFRIIPIESPLDTPSPNCTLDLASTLEVGT 618

Query: 706 -GANI-GEAASGG-SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
            G+ I G + SG  +++T+AFQ   +S     +++ +   + ++I+ +V+RI  +LS
Sbjct: 619 PGSRITGHSRSGSKAVMTIAFQFAFESHLQDSVAVMARQYMRSIIS-SVQRIALALS 674



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELG----LEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      ++P Q+K WFQN+R + K  
Sbjct: 19  KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECAVLASVDPKQIKVWFQNRRCREK-- 76

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E+ +L++ N KL A N
Sbjct: 77  -QRKESGRLQSLNRKLAAMN 95


>gi|115489546|ref|NP_001067260.1| Os12g0612700 [Oryza sativa Japonica Group]
 gi|122248513|sp|Q2QM96.1|HOX33_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX33; AltName:
           Full=HD-ZIP protein HOX33; AltName: Full=Homeodomain
           transcription factor HOX33; AltName: Full=OsHox33
 gi|187609460|sp|A2ZMN9.2|HOX33_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX33; AltName:
           Full=HD-ZIP protein HOX33; AltName: Full=Homeodomain
           transcription factor HOX33; AltName: Full=OsHox33
 gi|77556590|gb|ABA99386.1| class III HD-Zip protein 4, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113649767|dbj|BAF30279.1| Os12g0612700 [Oryza sativa Japonica Group]
 gi|218187239|gb|EEC69666.1| hypothetical protein OsI_39093 [Oryza sativa Indica Group]
 gi|222617467|gb|EEE53599.1| hypothetical protein OsJ_36852 [Oryza sativa Japonica Group]
          Length = 855

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 118/513 (23%), Positives = 192/513 (37%), Gaps = 106/513 (20%)

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNH 347
           L+ +A+     +M+   GTA    +   ++  P  IG       C   A+R   +V +  
Sbjct: 175 LLAIAEETLAEFMSKATGTAVEWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEP 234

Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
             + EIL D   W             ++++     GN  G ++++  +   P+ L   R+
Sbjct: 235 TKVAEILKDRPSW-------YRDCRCVDIIHVIPTGN-GGTIELIYMQTYAPTTLAAPRD 286

Query: 408 SYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVT 460
            + +RY     +G+  + + SL      P+       +R    PSG LI+    G S + 
Sbjct: 287 FWTLRYTSGLEDGSLVICERSLTQSTGGPSGPNTPNFIRAEVLPSGYLIRPCEGGGSMIY 346

Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITN 520
            V+HV++D   V  + + L  +      K  +A L R   ++A   +  IP G       
Sbjct: 347 IVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAAL-RHIRQIAHESSGEIPYGA------ 399

Query: 521 QDGRKSML--KLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKS----VDDPGR 574
             GR+  +    ++R+   F   VS      W+ LS  G++D+ +    S    V     
Sbjct: 400 --GRQPAVFRTFSQRLSRGFNDAVSGFPDDGWSLLSSDGSEDITISVNSSPNKLVGSHVS 457

Query: 575 PP--------GIVLSAATSFWLPVPPKRVFDFLRDENTRSEW-----DILSNGGVVQEMA 621
           P         GI+ + A+     VPP  +  FLR+   RSEW     D  S   +     
Sbjct: 458 PNPLFSTVGGGILCAKASMLLQNVPPALLVRFLREH--RSEWADPGVDAYSAASLRASPY 515

Query: 622 HIANGRDTGNCVS--------------LLRVNCLQSANSSQS------NMLILQ------ 655
            +   R +G   S               L V  L+    S        +M +LQ      
Sbjct: 516 AVPGLRTSGFMGSQVILPLAHTLEHEEFLEVIRLEGHGFSHDEVLLSRDMYLLQLCSGVD 575

Query: 656 ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHG--------- 706
           E+ T  +A  V +AP+D             D   LLPSGF ++P  T + G         
Sbjct: 576 ENATSASAQLV-FAPID---------ESFADDAPLLPSGFRVIPLDTKMDGPSATRTLDL 625

Query: 707 ANIGEAASGG--------------SLLTVAFQI 725
           A+  E   GG              S+LT+AFQ 
Sbjct: 626 ASALEVGPGGASRASVEASGTCNRSVLTIAFQF 658



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 29  KYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L+T N KL A N
Sbjct: 87  -QRKEASRLQTVNRKLNAMN 105


>gi|297735973|emb|CBI23947.3| unnamed protein product [Vitis vinifera]
          Length = 118

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 9/104 (8%)

Query: 653 ILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSLHGANIGEA 712
           +LQES T   +S+V + PV+  + ++ LNGGDPD V ++PSGF+I PD         G  
Sbjct: 14  LLQESFTTSDSSYVTFTPVEASSFSMTLNGGDPDNVPVMPSGFSISPD---------GPT 64

Query: 713 ASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKA 756
              GSL+T+ FQIL  +         SV T+  LI  T + I A
Sbjct: 65  GDEGSLVTIVFQILDGTASPMHFPSHSVGTMYKLITETAKSITA 108


>gi|270271299|gb|ACZ67178.1| transcription factor HEX, partial [Populus deltoides]
          Length = 64

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 2/65 (3%)

Query: 148 QHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLR 207
           Q +R +N  LR ENE L+ DN R +  L N  CPNCGG   +G + F+E  LRLENARLR
Sbjct: 2   QQDRSDNLILRAENESLKNDNYRLQAELRNLICPNCGGQAMLGAIPFEE--LRLENARLR 59

Query: 208 EEIDR 212
           +E++R
Sbjct: 60  DELER 64


>gi|6634772|gb|AAF19752.1|AC009917_11 Strong similarity to gb|Y10922 HD-Zip protein from Arabidopsis
           thaliana, containing START PF|01852, bZIP transcription
           factor PF|00170, and homeobox PF|00046 domains. ESTs
           gb|F20019, gb|Z46707, gb|Z46706, gb|F20018 come from
           this gene [Arabidopsis thaliana]
          Length = 840

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 112/511 (21%), Positives = 197/511 (38%), Gaps = 104/511 (20%)

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C   A+R   +V +  + + EIL D   W             +E L+ 
Sbjct: 198 PDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILKDRPSW-------FRDCRCVETLNV 250

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP--- 436
              GN  G ++++  +   P+ L   R+ + +RY     +G++ V + SL +    P   
Sbjct: 251 IPTGN-GGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATGGPNGP 309

Query: 437 ----AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                VR +   SG LI+    G S +  V+HV++D   V  + + L  +      K  V
Sbjct: 310 LSSSFVRAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTV 369

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTW 550
           A L R   ++A   +        G +    GR+   +   ++R+   F   V+      W
Sbjct: 370 AAL-RHVRQIAQETS--------GEVQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGW 420

Query: 551 TTLSGTGADDVRVMTRKSVDD-----------PGRPPGIVLSAATSFWLPVPPKRVFDFL 599
           + +S  G +D+ +M   S              P    G++ + A+     VPP  +  FL
Sbjct: 421 SPMSSDGGEDITIMINSSSAKFAGSQYGSSFLPSFGSGVLCAKASMLLQNVPPLVLIRFL 480

Query: 600 RDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCT 659
           R+   R+EW   ++ GV  +    A+ R T   V  +R           SN +IL  + T
Sbjct: 481 REH--RAEW---ADYGV--DAYSAASLRATPYAVPCVRTGGF------PSNQVILPLAQT 527

Query: 660 DPTASFV--------IYAPVDI--------------VAMNVV----------LNGGDPDY 687
                F+         Y+P D+              V  NVV          ++    D 
Sbjct: 528 LEHEEFLEVVRLGGHAYSPEDMGLSRDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADD 587

Query: 688 VALLPSGFAILP------------------DGTSLHGANIGEAASGGSL-LTVAFQILVD 728
             LLPSGF ++P                    +SL G+   ++ +   L LT+AFQ   D
Sbjct: 588 APLLPSGFRVIPLDQKTNPNDHQSASRTRDLASSLDGSTKTDSETNSRLVLTIAFQFTFD 647

Query: 729 SVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           +     ++  +   V N++  +++R+  +++
Sbjct: 648 NHSRDNVATMARQYVRNVVG-SIQRVALAIT 677



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 10/93 (10%)

Query: 83  DQEQRPNK---KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQVK 135
           D    P+K     +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K
Sbjct: 7   DDRDSPDKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIK 66

Query: 136 FWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
            WFQN+R + K   +R E+ +L+T N KL A N
Sbjct: 67  VWFQNRRCREK---QRKESARLQTVNRKLSAMN 96


>gi|15220758|ref|NP_174337.1| homeobox-leucine zipper protein ATHB-9 [Arabidopsis thaliana]
 gi|75096987|sp|O04292.1|ATBH9_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-9; AltName:
           Full=HD-ZIP protein ATHB-9; AltName: Full=Homeodomain
           transcription factor ATHB-9; AltName: Full=Protein
           PHAVOLUTA
 gi|2145358|emb|CAA71854.1| HD-Zip protein [Arabidopsis thaliana]
 gi|20069421|emb|CAD29544.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|110741482|dbj|BAE98697.1| HD-Zip protein [Arabidopsis thaliana]
 gi|332193111|gb|AEE31232.1| homeobox-leucine zipper protein ATHB-9 [Arabidopsis thaliana]
          Length = 841

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 112/511 (21%), Positives = 197/511 (38%), Gaps = 104/511 (20%)

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C   A+R   +V +  + + EIL D   W             +E L+ 
Sbjct: 199 PDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILKDRPSW-------FRDCRCVETLNV 251

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSP--- 436
              GN  G ++++  +   P+ L   R+ + +RY     +G++ V + SL +    P   
Sbjct: 252 IPTGN-GGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATGGPNGP 310

Query: 437 ----AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                VR +   SG LI+    G S +  V+HV++D   V  + + L  +      K  V
Sbjct: 311 LSSSFVRAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTV 370

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTW 550
           A L R   ++A   +        G +    GR+   +   ++R+   F   V+      W
Sbjct: 371 AAL-RHVRQIAQETS--------GEVQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGW 421

Query: 551 TTLSGTGADDVRVMTRKSVDD-----------PGRPPGIVLSAATSFWLPVPPKRVFDFL 599
           + +S  G +D+ +M   S              P    G++ + A+     VPP  +  FL
Sbjct: 422 SPMSSDGGEDITIMINSSSAKFAGSQYGSSFLPSFGSGVLCAKASMLLQNVPPLVLIRFL 481

Query: 600 RDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCT 659
           R+   R+EW   ++ GV  +    A+ R T   V  +R           SN +IL  + T
Sbjct: 482 REH--RAEW---ADYGV--DAYSAASLRATPYAVPCVRTGGF------PSNQVILPLAQT 528

Query: 660 DPTASFV--------IYAPVDI--------------VAMNVV----------LNGGDPDY 687
                F+         Y+P D+              V  NVV          ++    D 
Sbjct: 529 LEHEEFLEVVRLGGHAYSPEDMGLSRDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADD 588

Query: 688 VALLPSGFAILP------------------DGTSLHGANIGEAASGGSL-LTVAFQILVD 728
             LLPSGF ++P                    +SL G+   ++ +   L LT+AFQ   D
Sbjct: 589 APLLPSGFRVIPLDQKTNPNDHQSASRTRDLASSLDGSTKTDSETNSRLVLTIAFQFTFD 648

Query: 729 SVPTAKLSLGSVATVNNLIACTVERIKASLS 759
           +     ++  +   V N++  +++R+  +++
Sbjct: 649 NHSRDNVATMARQYVRNVVG-SIQRVALAIT 678



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 76  HEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEP 131
           H      D   +     +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP
Sbjct: 4   HHSMDDRDSPDKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEP 63

Query: 132 LQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
            Q+K WFQN+R + K   +R E+ +L+T N KL A N
Sbjct: 64  RQIKVWFQNRRCREK---QRKESARLQTVNRKLSAMN 97


>gi|242070539|ref|XP_002450546.1| hypothetical protein SORBIDRAFT_05g006730 [Sorghum bicolor]
 gi|241936389|gb|EES09534.1| hypothetical protein SORBIDRAFT_05g006730 [Sorghum bicolor]
          Length = 114

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 35/128 (27%)

Query: 392 MTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------------- 437
           M AE  + SP +  R+  ++RY K+  EG WAV+DVS+D +   PA              
Sbjct: 1   MNAELWLQSPRLLNRKINFLRYNKRVAEGQWAVMDVSVDGILGPPAGSRTTDAAAIANNT 60

Query: 438 VRCRRRPSGCLIQEM--PNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATL 495
             CR   SGCLI++M   NGY                    K L+ +G AFGA RW+A+L
Sbjct: 61  TGCRLLLSGCLIEDMGKGNGYC-------------------KPLLRSGKAFGAHRWLASL 101

Query: 496 DRQCERLA 503
            RQ E LA
Sbjct: 102 QRQYEYLA 109


>gi|449533848|ref|XP_004173883.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like, partial
           [Cucumis sativus]
          Length = 293

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 142/359 (39%), Gaps = 83/359 (23%)

Query: 106 EAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTEN 161
           E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K   +R E ++L+T N
Sbjct: 1   ERLYYECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVN 57

Query: 162 EKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYV 221
            KL A N    E                            EN RL++++ ++      Y 
Sbjct: 58  RKLTAMNRLLME----------------------------ENDRLQKQVSQL-VYENSYF 88

Query: 222 GKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPTEADKPMIIE 281
            +   N              LA  +   +  +  G+       L     P +A    ++ 
Sbjct: 89  RQQTQN------------ATLATTDTSCESVVTSGQQN-----LTPPHPPKDASPAGLLS 131

Query: 282 LAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRE 339
           +A   + E +  A            GTA    +   ++  P  IG       C   A+R 
Sbjct: 132 IAEETLAEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARA 180

Query: 340 TAVVIMNHISLVEILMDVNQWSTVFSGIVSRAM-TLEVLSTGVAGNYNGALQVMTAEFQV 398
             +V +    + EIL D   W + F     RA+  L VLSTG      G ++++  +   
Sbjct: 181 CGLVGLEPTRVAEILKD---WPSWFRD--CRAVDVLNVLSTG----NGGTIELLYMQLYA 231

Query: 399 PSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQ 450
           P+ L P R+ + +RY     +G+  V + SL+N +  P+       VR    PSG LI+
Sbjct: 232 PTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQNFVRAEMLPSGYLIR 290


>gi|357126820|ref|XP_003565085.1| PREDICTED: homeobox-leucine zipper protein HOX29-like isoform 2
           [Brachypodium distachyon]
          Length = 872

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 118/540 (21%), Positives = 216/540 (40%), Gaps = 116/540 (21%)

Query: 301 WMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVN 358
           +++   GTA    +   ++  P  IG       C   A+R   +V M    + EIL D  
Sbjct: 202 FLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRP 261

Query: 359 QWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHG 418
            W       +    ++EV++   AG+ NG ++++  +    + L P R+ + +RY     
Sbjct: 262 LW-------LRDCRSMEVVNVLPAGS-NGTIELLYMQLYAQTTLAPARDFWLLRYTSILD 313

Query: 419 EGTWAVVDVSLDNLR--PS-----PAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRG 471
           +G+  V + SL + +  PS     P +R    PSG LI+    G S +  V+H++++ R 
Sbjct: 314 DGSLVVCERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDGGGSVIHIVDHLDLEPRS 373

Query: 472 VHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK--SMLK 529
           V  + + L  +      K  +A L R   +LA     +I TG         GR+  ++  
Sbjct: 374 VPEVVRPLYESSAIVAQKMSMAAL-RYLRQLAHEDTHSIITGW--------GRQPAALRA 424

Query: 530 LAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDD------------PGRPPG 577
           L++++   F   +   T   W+ +   G DDV +    S++             P    G
Sbjct: 425 LSQKLTRGFNEALCGLTDDGWSAIESDGVDDVCISVNSSLNKVISCNATFGDGLPIVSAG 484

Query: 578 IVLSAATSFWLPVPPKRVFDFLRDENTRSEW-----DILS-------------------N 613
           ++ + A+     V P  +  FL +   RS+W     D                      +
Sbjct: 485 VLCAKASMLLQDVSPPSLLQFLHEH--RSQWADSTLDAFFASALKPNFCNLPMSRLGGFS 542

Query: 614 GGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQS-----NMLILQ-----ESCTDPTA 663
           G V+  +AH  +  +       L V  + +A++ Q      ++ +LQ     +  T  + 
Sbjct: 543 GQVILPLAHTFDPEE------FLEVIKIGNASNYQDTLMHRDLFLLQMYNGVDENTVGSC 596

Query: 664 SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSL------------------- 704
           S +I+AP+D             D   LLPSGF I+P  + L                   
Sbjct: 597 SELIFAPID---------ASFSDDSPLLPSGFRIIPIDSPLDTSSPNCTLDLASTLEVGT 647

Query: 705 -HGANIGEAASGG----SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
             G   G  +  G    +++T+AFQ   +S     ++  +   + ++I+ +V+RI  +LS
Sbjct: 648 PRGRMTGSGSVNGAGMKAVMTIAFQFAFESHLQDSVAAMAQQYMRSIIS-SVQRIALALS 706



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      ++P Q+K WFQN+R + K  
Sbjct: 15  KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECAVLAAVDPKQIKVWFQNRRCREK-- 72

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E+ +L++ N KL A N
Sbjct: 73  -QRRESGRLQSLNRKLTAMN 91


>gi|147783606|emb|CAN61612.1| hypothetical protein VITISV_013992 [Vitis vinifera]
          Length = 842

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 96/400 (24%), Positives = 157/400 (39%), Gaps = 78/400 (19%)

Query: 349 SLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRES 408
           +L EIL D   W            +LEV +   AGN  G ++++  +   P+ L P R+ 
Sbjct: 221 TLKEILKDRPSW-------FRDCRSLEVFTMFPAGN-GGTVELLYTQIYAPTTLAPARDF 272

Query: 409 YYVRYCKQHGEGTWAVVDVSLDNLRPSP-------AVRCRRRPSGCLIQEMPNGYSKVTW 461
           + +RY      G+  V + SL      P        VR    PSG LI+    G S +  
Sbjct: 273 WTLRYTTSLDNGSLVVCERSLSGSGAGPNTAAAAQFVRAEMLPSGYLIRPCEGGGSIIHI 332

Query: 462 VEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQ 521
           V+H+ ++   V  + + L  +      K  +A L R   ++A   +  +  G        
Sbjct: 333 VDHLNLEAWSVPEVLRPLYESSRVVAQKMTIAAL-RYIRQIAQETSGEVVYGL------- 384

Query: 522 DGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV--RVMTRKSVDDPGRP-- 575
            GR+   +   ++R+   F   ++      W+ +S  GA+DV   V + K+++    P  
Sbjct: 385 -GRQPAVLRTFSQRLSRGFNDAINGFNDDGWSLMSCDGAEDVIIAVNSTKNLNTTSNPAN 443

Query: 576 ----PGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEWDILS------------------ 612
               PG VL A  S  L  VPP  +  FLR+   RSEW   S                  
Sbjct: 444 SLSLPGGVLCAKASMLLQNVPPAVLVRFLREH--RSEWADFSVDAYSAASLKASPYSYPG 501

Query: 613 -------NGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCT--DPTA 663
                     ++  + H     +    +  L  + L   ++  S  + L + C+  D  A
Sbjct: 502 MRPTRFTGSQIIMPLGHTIEHEELLEVIR-LEGHSLAHEDAFMSRDIHLLQICSGVDENA 560

Query: 664 ----SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 699
               S +++AP+D +          PD   LLPSGF I+P
Sbjct: 561 VGACSELVFAPIDEMF---------PDDAPLLPSGFRIIP 591



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 25/133 (18%)

Query: 61  LREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQR 120
           + ++  +S+ SGS N    SG           +Y R+T  Q++ +E  + ECP P   +R
Sbjct: 5   IAQQHRESSSSGSINKHLDSG-----------KYVRYTAEQVEALERVYLECPKPSSLRR 53

Query: 121 KELSREL----GLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRA-------DNM 169
           ++L RE      +EP Q+K WFQN+R + K   +R E ++L+T N KL A       +N 
Sbjct: 54  QQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEEND 110

Query: 170 RYREALSNASCPN 182
           R ++ +S   C N
Sbjct: 111 RLQKQVSQLVCEN 123


>gi|383212095|dbj|BAM08934.1| class III homeobox-leucine zipper protein [Asparagus officinalis]
          Length = 849

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 109/466 (23%), Positives = 173/466 (37%), Gaps = 87/466 (18%)

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNH 347
           L+ +A+     +++   GTA    +   ++  P  IG       C   A+R   +V +  
Sbjct: 167 LLAIAEETLAEFLSKATGTAVEWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEP 226

Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
             + EIL D   W            +L+VL+    GN  G +++M  +   P+ L   R+
Sbjct: 227 TKVAEILKDRPSW-------YRDCRSLDVLTVIPTGN-GGNIELMYMQTYAPTTLASARD 278

Query: 408 SYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVT 460
            + +RY     +G+  + + SL      PA       VR    PSG LI+    G S + 
Sbjct: 279 FWTLRYTTGLEDGSLVICERSLTPSTGGPAGPPASGFVRAEMLPSGYLIRPCEGGGSMIH 338

Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD--RQCERLASVMATNIPTGEVGVI 518
            V+H+++D   V  + + L  +      K  +A L   RQ  +  S           G I
Sbjct: 339 IVDHMDLDAWSVPEVLRPLYESPKILAQKMTIAALHHIRQIAQETS-----------GEI 387

Query: 519 TNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKS-------- 568
               GR+   +   ++R+   F   V+  T   W+ L   G +DV +M   S        
Sbjct: 388 AYGGGRQPAVLRTFSQRLSKGFNDAVNGFTDDGWSLLGSDGVEDVTIMINSSPNKLFGSH 447

Query: 569 VDDPGRPP---GIVLSAATSFWLPVPPKRVFDFLRDENTRSEW-----DILS-------- 612
            +     P   GI+ + A+     VPP  +  FLR+   RSEW     D  S        
Sbjct: 448 ANSSIFSPIGGGILCAKASMLLQNVPPALLVRFLREH--RSEWADCGVDAYSAASLRASP 505

Query: 613 -------------NGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQ---- 655
                         G V+  +AH     +    + L      Q       +M +LQ    
Sbjct: 506 YAVPGLRASNGFMGGQVILPLAHTVEHEEFLEVIRLEGHGFTQDDVIMSRDMFLLQLCSG 565

Query: 656 --ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 699
             E+     A  V +AP+D             D   LLPSGF I+P
Sbjct: 566 VDENSVGACAQLV-FAPID---------ESFADDAPLLPSGFRIIP 601



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 8/96 (8%)

Query: 77  EGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPL 132
           +G +G   +Q+ +  K Y R+T  Q++ +E  + ECP P   +R++L RE      +EP 
Sbjct: 8   QGQNGKSIQQQIDAGK-YVRYTPEQVEALERVYSECPKPSSIRRQQLIRECPILSNIEPK 66

Query: 133 QVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
           Q+K WFQN+R + K   +R E ++L+T N KL A N
Sbjct: 67  QIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMN 99


>gi|383212093|dbj|BAM08933.1| class III homeobox-leucine zipper protein [Asparagus asparagoides]
          Length = 849

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 109/466 (23%), Positives = 174/466 (37%), Gaps = 87/466 (18%)

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNH 347
           L+ +A+     +++   GTA    +   ++  P  IG       C   A+R   +V +  
Sbjct: 167 LLAIAEETLAEFLSKATGTAVEWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEP 226

Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
             + EIL D   W            +L+VL+    GN  G +++M  +   P+ L   R+
Sbjct: 227 TKVAEILKDRPSW-------YRDCRSLDVLTVIPTGN-GGNIELMYMQTYAPTTLASARD 278

Query: 408 SYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVT 460
            + +RY     +G+  + + SL      PA       VR    PSG LI+    G S + 
Sbjct: 279 FWTLRYTTGLEDGSLVICERSLTPSTGGPAGPPASGFVRAEMLPSGYLIRPCEGGGSMIH 338

Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD--RQCERLASVMATNIPTGEVGVI 518
            V+H+++D   V  + + L  +      K  +A L   RQ  +  S           G I
Sbjct: 339 IVDHMDLDAWSVPEVLRPLYESPKILAQKMTIAALHHIRQIAQETS-----------GEI 387

Query: 519 TNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKS-------- 568
               GR+   +   ++R+   F   V+  T + W+ L   G +DV +M   S        
Sbjct: 388 AYGGGRQPAVLRTFSQRLSKGFNDAVNGFTDNGWSLLGSDGVEDVTIMINSSPNKLFGSH 447

Query: 569 VDDPGRPP---GIVLSAATSFWLPVPPKRVFDFLRDENTRSEW-----DILS-------- 612
            +     P   GI+ + A+     VPP  +  FLR+   RSEW     D  S        
Sbjct: 448 ANSSIFSPIGGGILCAKASMLLQNVPPALLVRFLREH--RSEWADCGVDAYSAASLRASP 505

Query: 613 -------------NGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQ---- 655
                         G V+  +AH     +    + L      Q       +M +LQ    
Sbjct: 506 YAVPGLRASSGFMGGQVILPLAHTIEHEEFLEVIRLEGHGFTQDDVIMARDMFLLQLCSG 565

Query: 656 --ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 699
             E+     A  V +AP+D             D   LLPSGF I+P
Sbjct: 566 VDENSVGACAQLV-FAPID---------ESFADDAPLLPSGFRIIP 601



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 8/96 (8%)

Query: 77  EGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPL 132
           +G +G   +Q+ +  K Y R+T  Q++ +E  + ECP P   +R++L RE      +EP 
Sbjct: 8   QGQNGKSSQQQIDAGK-YVRYTPEQVEALERVYSECPKPSSMRRQQLIRECPILSNIEPK 66

Query: 133 QVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
           Q+K WFQN+R + K   +R E ++L+T N KL A N
Sbjct: 67  QIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMN 99


>gi|115482560|ref|NP_001064873.1| Os10g0480200 [Oryza sativa Japonica Group]
 gi|75168160|sp|Q9AV49.1|HOX9_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX9; AltName:
           Full=HD-ZIP protein HOX9; AltName: Full=Homeodomain
           transcription factor HOX9; AltName: Full=OsHB2; AltName:
           Full=OsHox9
 gi|13384370|gb|AAK21338.1|AC024594_2 putative homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|31432701|gb|AAP54299.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
 gi|78708820|gb|ABB47795.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
 gi|113639482|dbj|BAF26787.1| Os10g0480200 [Oryza sativa Japonica Group]
          Length = 840

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 122/302 (40%), Gaps = 36/302 (11%)

Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
           GI     G +  A+R   +V +    +VEIL D   W            +LEV +   AG
Sbjct: 200 GIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSW-------FRDCRSLEVFTMFPAG 252

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVD-------VSLDNLRPSP 436
           N  G ++++  +   P+ LVP R+ + +RY     +G+  V +                 
Sbjct: 253 N-GGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQ 311

Query: 437 AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD 496
            VR    PSG L++    G S V  V+H++++   V  + + L  +      K   A L 
Sbjct: 312 FVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAAL- 370

Query: 497 RQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLS 554
           R   ++A   +        G +    GR+   +   ++R+   F   +S      W+ + 
Sbjct: 371 RHIRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMG 422

Query: 555 GTGADDVRVM--------TRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRS 606
           G G +DV +         T  S +    P G++ + A+     VPP  +  FLR+   RS
Sbjct: 423 GDGIEDVIIACNAKKVRNTSTSANAFVTPGGVICAKASMLLQSVPPAVLVRFLREH--RS 480

Query: 607 EW 608
           EW
Sbjct: 481 EW 482



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L R+      +EP Q+K WFQN+R + K  
Sbjct: 29  KYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCRDK-- 86

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L+  N KL A N
Sbjct: 87  -QRKEASRLQAVNRKLTAMN 105


>gi|326526073|dbj|BAJ93213.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 840

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 113/514 (21%), Positives = 197/514 (38%), Gaps = 107/514 (20%)

Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
           GI     G +  A+R   +V +    +VEIL D   W            +LEV +   AG
Sbjct: 203 GIVAISHGCRGVAARACGLVNLEPTKIVEILKDRPSW-------FRDCRSLEVFTMLPAG 255

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVD-------VSLDNLRPSP 436
           N  G ++++  +   P+ LVP R+ + +RY     +G+  V +                 
Sbjct: 256 N-GGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQ 314

Query: 437 AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD 496
            VR    PSG L++    G S V  V+H++++   V  + + L  +      K   A L 
Sbjct: 315 FVRAEMLPSGYLVRPCDGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAAL- 373

Query: 497 RQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLS 554
           R   ++A   +        G +    GR+   +   ++R+   F   +S      W+ ++
Sbjct: 374 RHIRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMA 425

Query: 555 GTGADDV-------RVMTRKSVDDPGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENTRS 606
           G G +DV       ++ +  +  +    PG V+ A  S  L  VPP  +  FLR+   RS
Sbjct: 426 GDGIEDVIIACNSKKIRSNNTAPNAFIAPGGVICAKASMLLQNVPPAVLVRFLREH--RS 483

Query: 607 EWD-------------------------ILSNGGVVQEMAHIANGRDTGNCVSLLRVNCL 641
           EW                            S   ++  +AH     +    + ++R+   
Sbjct: 484 EWADYNFDAYSASALKSSSCSLPGLRPMRFSGSQIIMPLAHTVENEEI---LEVVRLEGQ 540

Query: 642 QSANSSQSNMLILQESCTD------PTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGF 695
                  S  + L + CT        +   +++AP+D +          PD   L+ SGF
Sbjct: 541 ALDEGLLSRDIHLLQFCTGIDEKSMGSCFQLVFAPIDELF---------PDDAPLISSGF 591

Query: 696 AILP-----DG----------TSLHGANIGEAASGG-------SLLTVAFQI-----LVD 728
            ++P     DG          +SL   +    ASG        S+LT+AFQ      L D
Sbjct: 592 RVIPLDMKTDGAPTGRTLDLASSLEAGSTTLQASGNADDCNLRSVLTIAFQFPYEMHLQD 651

Query: 729 SVPT-AKLSLGSVATVNNLIACTVERIKASLSCE 761
           SV T A+  + S+ +    ++  +   ++ L+ E
Sbjct: 652 SVATMARQYVRSIVSAVQRVSMAISPSRSGLNAE 685



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 32  KYVRYTPEQVEALERVYAECPKPTSTRRQQLLRECPILSNIEPRQIKVWFQNRRCRDK-- 89

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E+++L+  N KL A N
Sbjct: 90  -QRKESSRLQAVNRKLSAMN 108


>gi|357129750|ref|XP_003566524.1| PREDICTED: homeobox-leucine zipper protein ROC8-like [Brachypodium
           distachyon]
          Length = 121

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 1/72 (1%)

Query: 141 KRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLR 200
           +RT  + QHE   N  LRTEN+K+R +N+   +AL N   P CGGP + GE  F E  L 
Sbjct: 47  RRTLFQAQHEHANNCFLRTENDKIRCENIAMSKALKNVVYPTCGGPPS-GEDFFAEQKLH 105

Query: 201 LENARLREEIDR 212
           ++NARL+EE+++
Sbjct: 106 MDNARLKEEVNK 117


>gi|222613019|gb|EEE51151.1| hypothetical protein OsJ_31913 [Oryza sativa Japonica Group]
          Length = 816

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 122/302 (40%), Gaps = 36/302 (11%)

Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
           GI     G +  A+R   +V +    +VEIL D   W            +LEV +   AG
Sbjct: 176 GIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSW-------FRDCRSLEVFTMFPAG 228

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVD-------VSLDNLRPSP 436
           N  G ++++  +   P+ LVP R+ + +RY     +G+  V +                 
Sbjct: 229 N-GGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQ 287

Query: 437 AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD 496
            VR    PSG L++    G S V  V+H++++   V  + + L  +      K   A L 
Sbjct: 288 FVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAAL- 346

Query: 497 RQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLS 554
           R   ++A   +        G +    GR+   +   ++R+   F   +S      W+ + 
Sbjct: 347 RHIRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMG 398

Query: 555 GTGADDVRVM--------TRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRS 606
           G G +DV +         T  S +    P G++ + A+     VPP  +  FLR+   RS
Sbjct: 399 GDGIEDVIIACNAKKVRNTSTSANAFVTPGGVICAKASMLLQSVPPAVLVRFLREH--RS 456

Query: 607 EW 608
           EW
Sbjct: 457 EW 458



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L R+      +EP Q+K WFQN+R + K  
Sbjct: 5   KYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCRDK-- 62

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L+  N KL A N
Sbjct: 63  -QRKEASRLQAVNRKLTAMN 81


>gi|45775302|gb|AAS77254.1| class III HD-Zip protein [Populus tremula x Populus alba]
          Length = 843

 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 123/546 (22%), Positives = 216/546 (39%), Gaps = 105/546 (19%)

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNH 347
           L+ +A+     +++   GTA    +   ++  P  +G      +C   A+R   +V +  
Sbjct: 162 LLSLAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQRCSGVAARACGLVSLEP 221

Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
             L EIL D                 LE  +   AGN  G ++++  +   P+ L P R+
Sbjct: 222 TKLAEILKDRQ-------SRFRDCRNLEPFTMFPAGN-GGTIELLYRQIYAPTTLAPARD 273

Query: 408 SYYVRYCKQHGEGTWAVVDVSLDNLRPSP-------AVRCRRRPSGCLIQEMPNGYSKVT 460
            + +RY      G+  V D SL      P        VR    PSG LI+    G S + 
Sbjct: 274 FWTLRYTISLENGSLVVCDRSLSGSGAGPNAAAAAQFVRAEMLPSGYLIRPCEGGGSIIH 333

Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITN 520
            V+H+ +    V  + + L  +  A   K  +  L R   ++A   +  +  G       
Sbjct: 334 IVDHLNLQAWSVPEVLRPLYESSKAVAQKVTITAL-RHVRQIAHETSGEVVYGL------ 386

Query: 521 QDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV--RVMTRKSVDDPGRPP 576
             GR+   +   ++R+   F   ++      W+ ++  GA+DV   V T K++     P 
Sbjct: 387 --GRQPAVLRTFSQRLSRGFNDAINGFNDDGWSLMNSDGAEDVIIAVNTTKNLISANNPA 444

Query: 577 -------GIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILS----NGGVVQEMAHIAN 625
                  GI+ + A+     VPP  +  FLR+   RSEW   S    +   ++  ++   
Sbjct: 445 HSLSFLGGILCAKASMLLQNVPPAVLVRFLREH--RSEWADFSVDAYSAASLKAGSYAYP 502

Query: 626 G----RDTGNCV-----------SLLRVNCLQSANSSQSNMLI-----LQESCT--DPTA 663
           G    R TG+ +            LL V  L+  + +Q +  +     L + C+  D  A
Sbjct: 503 GMRSMRFTGSQIIMPLGHTIEQEELLEVIRLEGHSFAQEDAFVSRDIHLLQICSGIDENA 562

Query: 664 ----SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP------------------DG 701
               S +++AP+D +          PD   LLPSGF ++P                  D 
Sbjct: 563 VGACSELVFAPIDEMF---------PDDAPLLPSGFRVIPLESKTKDAQEALTTNRTLDL 613

Query: 702 TSL--------HGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVER 753
           TS         H +  G +    S+LT+AFQ   +S     ++  +   V ++I+ +V+R
Sbjct: 614 TSSLEVGPVTNHASVDGSSCHLRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS-SVQR 672

Query: 754 IKASLS 759
           +  ++S
Sbjct: 673 VATAIS 678



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 14/120 (11%)

Query: 74  ENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GL 129
           ++ E +S     +      +Y R+T  Q++ +E  + ECP P   +R++L RE      +
Sbjct: 8   QHRESSSSGSLNKHLADNGKYVRYTSEQVEALERVYAECPKPSSLRRQQLIRECPILANI 67

Query: 130 EPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRA-------DNMRYREALSNASCPN 182
           EP Q+K WFQN+R + K   +R E+++L+T N KL A       +N R ++ +S   C N
Sbjct: 68  EPKQIKVWFQNRRCREK---QRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 124


>gi|224113651|ref|XP_002332526.1| predicted protein [Populus trichocarpa]
 gi|60327625|gb|AAX19052.1| class III HD-Zip protein 3 [Populus trichocarpa]
 gi|222832638|gb|EEE71115.1| predicted protein [Populus trichocarpa]
          Length = 843

 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 21/138 (15%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 16  KYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILCNIEPKQIKVWFQNRRCREK-- 73

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E+++L+T N KL A N    E                  +     HL  EN  +R+
Sbjct: 74  -QRKESSRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSHLVYENGYMRQ 118

Query: 209 EIDRISAIAAKYVGKPVV 226
           +I   SA A     + VV
Sbjct: 119 QIQTASATATDNSCESVV 136



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 124/310 (40%), Gaps = 44/310 (14%)

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C   A+R   +V +  I + EIL D   W             L+++S 
Sbjct: 194 PDSIGIVAVSRNCSGVAARACGLVSLEPIKVAEILKDRPSW-------FRDCRCLDIMSV 246

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-- 437
              G+  G ++++  +   P+ L   R+ + +RY     +G+  + + SL +    P   
Sbjct: 247 IPTGS-GGTIELIYMQTYAPTTLAAARDFWTLRYTTTLEDGSLVICERSLTSSTGGPTGP 305

Query: 438 -----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                VR    PSG LI+    G S +  V+HV++D   V  + + L  +      K  +
Sbjct: 306 PSSSFVRADMLPSGYLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKMTM 365

Query: 493 ATLD--RQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAH 548
           A L   RQ  +  S           G I    GR+   +   ++R+   F   V+  T  
Sbjct: 366 AALQYIRQIAQETS-----------GEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFTDS 414

Query: 549 TWTTLSGTGADDVRVMTRKS--------VDDPGRPP--GIVLSAATSFWLPVPPKRVFDF 598
            W+ L G G DDV ++   S         +    P   G++ + A+     VPP  +  F
Sbjct: 415 GWSLLDGDGGDDVTIVINSSPTKFLGSQYNASISPTFGGVLCAKASMLLQNVPPALLVRF 474

Query: 599 LRDENTRSEW 608
           LR+   RSEW
Sbjct: 475 LREH--RSEW 482


>gi|89514839|gb|ABD75294.1| class III homeodomain-leucine zipper protein C3HDZ1 [Chara
           corallina]
          Length = 910

 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 169/427 (39%), Gaps = 95/427 (22%)

Query: 336 ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY---NGALQVM 392
           ASR   +V+M    +   L D +QW              E   + V G +    G ++++
Sbjct: 268 ASRVYGLVLMEPAKVASALKDRSQW------------LRECRKSEVLGEFRTDQGTVEIV 315

Query: 393 TAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLD---NLRPSPA-VRCRRRPSGCL 448
             +   P+ L P R+    RY     +G+  + + S+    NL P PA VR    PSG  
Sbjct: 316 YTQMFAPTTLAPPRDFCTFRYTTFMQDGSIVICERSMSGGTNLEPVPAFVRAEMHPSGYY 375

Query: 449 IQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMAT 508
           I+   NG S +  V+HV++    V  + + L  +  A   ++ +  L R   RLAS    
Sbjct: 376 IKPC-NGNSIIYIVDHVDLKPLSVPEVLRPLYESSAALAQRQTMEAL-RYLRRLASDSNL 433

Query: 509 NIPTGEVGVITNQDGRKSML--KLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMT- 565
           + P          +G +++    +AER+   F   V+      W  L G G DDV V   
Sbjct: 434 DSPRA--------NGHQALAWRGIAERIARGFNEAVNGFPDDGWVPLMGDGMDDVSVAAR 485

Query: 566 -----RKSVDDPGR---------PPGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEW-- 608
                R S  +P             G VL A  S  L  VPP  +  FLR+   R+EW  
Sbjct: 486 PLNGQRHSGSNPAMSGNSEALRASEGGVLCAKASMLLQNVPPALLIKFLREH--RAEWVP 543

Query: 609 -DI-LSNGGVVQ--EMAHIANGRDTGNCVS---------------------LLRV----- 638
            D+ LS+  +++    + +A GR+    ++                      L V     
Sbjct: 544 ADLELSSAAMMRGANGSFMAPGRNGEEIITPMPPVPLSGCYGTYLSDPSEEFLEVVKGGS 603

Query: 639 -NCLQSANSSQSNMLILQE-SCTDPTA----SFVIYAPVDIVAMNVVLNGGDPDYVALLP 692
             C Q +       L LQ  S TD  A    + +++APVD  +          D  ++LP
Sbjct: 604 QACGQESGIMSRQTLNLQLCSGTDTNAVAAVAQLVFAPVDAAS--------SADDFSILP 655

Query: 693 SGFAILP 699
           SGF ++P
Sbjct: 656 SGFRVIP 662



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 20/122 (16%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R +L +E      +EP Q+K WFQN+R + K  
Sbjct: 5   KYVRYTNEQVEALERVYNECPKPSSARRSQLLQEYPILANIEPKQIKVWFQNRRCREK-- 62

Query: 149 HERHENTQLRTENEKLRADN---MRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENAR 205
            +R E T+L   N KL A N   M   E L   +           E+S +   LR E A+
Sbjct: 63  -QRKEATRLINMNAKLSALNKMLMEENERLMKQTT----------ELSMEVQVLRQELAK 111

Query: 206 LR 207
            R
Sbjct: 112 YR 113


>gi|24417149|dbj|BAC22513.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 846

 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 217/548 (39%), Gaps = 112/548 (20%)

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNH 347
           L+ +A+     +++   GTA    +   ++  P  +G       C   A+R   +V +  
Sbjct: 168 LLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEP 227

Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
             +VEIL D   W             LEVL+   AGN  G ++++  +   P+ L P R+
Sbjct: 228 TKIVEILKDRTSW-------FRDCRNLEVLTMLPAGN-GGTIELVYTQVYAPTTLAPARD 279

Query: 408 SYYVRYCKQHGEGTWAVVDVSL-------DNLRPSPAVRCRRRPSGCLIQEMPNGYSKVT 460
            + +RY      G+  V + SL       +    S  VR    PSG LI+    G S + 
Sbjct: 280 FWTLRYTTSLENGSLVVCERSLSGPGGGPNAAAASQFVRGEMLPSGYLIRPCDGGGSIIH 339

Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITN 520
            V+H+ ++      + + L  +      K  +A L R   ++A   +  +  G       
Sbjct: 340 IVDHLNLEPWSAPEVLRPLYESSKVVAQKMTIAAL-RYIRQIAQESSGEVVYGL------ 392

Query: 521 QDGRKSML--KLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVM--------TRKSVD 570
             GR+  +   L++R+   F   ++      W+ ++  GA+DV V         T  +  
Sbjct: 393 --GRQPAILRTLSQRLSRGFNDAINGFNDDGWSLMNCDGAEDVIVSINSTKNLNTSTNSS 450

Query: 571 DPGRPPGIVLSA-ATSFWLPVPPKRVFDFLRDENTRSEW-----DILSNGGVVQE---MA 621
           +P    G VL A A+  +  VPP  +  FLR+   RSEW     D  S   V        
Sbjct: 451 NPLSFLGGVLCAKASMLFHNVPPAVLVRFLREH--RSEWADFNVDAYSAASVKASPYGYQ 508

Query: 622 HIANGRDTGNCV-----------SLLRVNCLQSANSSQSNMLI-----LQESCT--DPTA 663
            I   R TG+ V            +L V  L+     Q +  +     L + C+  D  A
Sbjct: 509 GIRPTRFTGSQVIMPLGQTIEHEEMLEVIRLEGHAVGQEDPFVSRDIHLLQLCSGIDENA 568

Query: 664 ----SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-------------------D 700
               S +++AP+D +          PD   L+PSGF I+P                   D
Sbjct: 569 VGACSELVFAPIDEMF---------PDDAPLIPSGFRIIPLEPKSGDPKDAAGTTHRTLD 619

Query: 701 GTSL----HGANIGEAASGGSLLTVAFQI-----LVDSVPTAKLSLGSVATVNNLIACTV 751
            TS        N G + +  S+LT+AFQ      L DSV T  ++   V +V N    +V
Sbjct: 620 LTSSLEVGQSTNHGSSDNMRSVLTIAFQFPFENNLADSVAT--MARQYVRSVIN----SV 673

Query: 752 ERIKASLS 759
           +R+  ++S
Sbjct: 674 QRVAMAIS 681



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 33  KYVRYTAEQVEALERVYAECPKPSSLKRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 90

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L+  N KL A N
Sbjct: 91  -QRKEASRLQMVNRKLSAMN 109


>gi|109729930|tpg|DAA05779.1| TPA_inf: class III HD-Zip protein HDZ33 [Selaginella
           moellendorffii]
          Length = 812

 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 152/700 (21%), Positives = 263/700 (37%), Gaps = 140/700 (20%)

Query: 91  KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMK 146
           + +Y R+T  Q++ +E  + ECP P   +R++L +E      + P Q+K WF        
Sbjct: 4   QNKYARYTNEQLEILELVYNECPKPSSLRRQQLMKEAPILANIAPKQLKVWF-------- 55

Query: 147 TQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARL 206
            Q+ R    Q R E  +L   N +   AL+     N         ++     L L+   L
Sbjct: 56  -QNRRCREKQ-RKETSRLHGLNSKL-TALNKILVENND------HLAKQSTQLTLQKHTL 106

Query: 207 REEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLR 266
           R+ +                 Y   S   P  P+E +    GA    G  E+ G ++L  
Sbjct: 107 RKHL-----------------YGDCSSQRP--PMEASQVCRGALAA-GSSEIAGTSEL-- 144

Query: 267 SISAPTEADKPMIIELAV-AAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGI 325
                     P I  L++      L  +A+     ++    GTA    +   ++  P   
Sbjct: 145 ----------PNIQHLSLDHGPVGLSALAEQSLADFLAKATGTAVDWIQLLGMKPGPDSF 194

Query: 326 GPKPTGFKCE--ASRETAVVIM-----NHISLVEILMDVNQWSTVFSGIVSRAMTLEVLS 378
           G       C+  A+R   +V +     +   +VE+L D   W         R+  + + S
Sbjct: 195 GIVAISHGCDGIAARALGLVALEATRVSEWRIVEVLKDKTSWL----WDCRRSDVIHICS 250

Query: 379 TGVAGNYNGA-LQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN---LRP 434
           +      NG+ +++M  +   P+ L P R+   +R      +G   V + S+ +   L  
Sbjct: 251 SE-----NGSTMEIMHTQLYAPTTLAPPRDFCTLRLTTSLEDGNLVVCERSISDAECLSY 305

Query: 435 SPA----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKR 490
            P+    VR     SG L++    G   V  ++H+++    V  +  + +   ++  A+R
Sbjct: 306 VPSTQYFVRAEMLTSGYLVRPCEGGSCIVHIIDHLDLKPSSVSEVLTRPLYRSSSLLAQR 365

Query: 491 WVATLDRQCERLASVMATNIPTGEVGVITNQDGRK-SMLK-LAERMVISFCAGVSASTAH 548
                 R  + LA          E+G I    G++ S+L+ L+ RM   F   V+     
Sbjct: 366 MTVKALRFLKHLAQ--------EEIGEIVVGGGQQPSVLRSLSRRMARGFNDAVNGFPDD 417

Query: 549 TWTTLSGTGADDVRV---------MTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFL 599
            W T+ G G D+V V         +++   D      G++ + A+     V P  +  FL
Sbjct: 418 GWCTMGGDGLDNVAVSCNATINFSLSKFQSDRLSSLAGVLCAKASMLLQNVHPSYLIRFL 477

Query: 600 RDENTRSEWDILSNGGVVQEMAHIANGRDTGNC-------VSLLRVNCLQSANSSQ---- 648
           RD   RSEW   +     Q+ A  ++G+   +           L    L+   S++    
Sbjct: 478 RDH--RSEWGC-NMDFFQQDAASRSHGKRQAHVPLFHTAKEDFLEAVILEGHYSAEDGTI 534

Query: 649 -SNMLILQESCTD------PTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-- 699
            S  + L + C+          S +I+APVD             D + LL SGF +LP  
Sbjct: 535 LSREIYLLQLCSGIEDEDIDGCSQLIFAPVD---------ANLSDDMPLLSSGFRVLPLC 585

Query: 700 -----------DGTSLHGANIGEAASGGSLLTVAFQILVD 728
                      D   L            S+LT+AFQ + +
Sbjct: 586 DDMDDIVKRQSDSEELRSGKRKNHKFARSILTIAFQFMYE 625


>gi|356512574|ref|XP_003524993.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Glycine max]
          Length = 853

 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 118/546 (21%), Positives = 212/546 (38%), Gaps = 105/546 (19%)

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNH 347
           L+ +AQ     +++   GTA    +   ++  P  IG       C   A+R   +V +  
Sbjct: 171 LLAIAQETLVEFLSKATGTAVNWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEP 230

Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
             + EIL D   W             L VLS   AGN  G +++M  +   P+ L   R+
Sbjct: 231 TKVAEILKDRPSW-------YRDCRCLNVLSVVSAGN-GGTIELMYMQTYAPTTLAAARD 282

Query: 408 SYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVT 460
            + +RY     +G+  + + SL +    P        +R    PSG LI+    G S + 
Sbjct: 283 FWTLRYSTSLEDGSLVICERSLTSSTGGPTGPAASNFIRAEMLPSGYLIRSCEGGGSIIH 342

Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITN 520
            V+HV++D   V  + + L  +      K   A L R   ++A   + ++  G       
Sbjct: 343 IVDHVDLDVWSVPEVLRPLYESPKFLAQKLTTAAL-RHARQIAQESSGDVHYG------- 394

Query: 521 QDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDD------- 571
             GR+   +   ++R+   F   V+      W+ +   G +DV +    S +        
Sbjct: 395 -GGRQPAVLRTFSQRLCKGFNDAVNGFVDDGWSLMGNDGVEDVTIAINSSPNKFFGSHYN 453

Query: 572 ----PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW-----DILSNGGVVQEMAH 622
               P    G++ + A+     VPP  +  FLR+   RSEW     D  S+  +      
Sbjct: 454 TSMLPAFGGGVMCAKASMLLQNVPPALLVRFLREH--RSEWANYEVDAYSSACLKASPYA 511

Query: 623 IANGRDTG-----------------NCVSLLRV--NCLQSANSSQSNMLILQESCT--DP 661
           +   R +G                   + ++R+  N     + + +  + L + C+  D 
Sbjct: 512 VPCARPSGFPSSHVIIPLAHTIEHEEFLEVVRIEGNAFPPDDVAWACDMYLMQLCSGIDE 571

Query: 662 TA----SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-----DGT----SLHGAN 708
            A    + +++AP+D             D   LLPSGF I+P     DG     +L  A+
Sbjct: 572 NAIGACAQLVFAPID---------ESFADDALLLPSGFRIIPLDPKTDGLASTRTLDLAS 622

Query: 709 IGEAASGG---------------SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVER 753
             E  SG                S+LT+AFQ   ++     +++ +   V N++  +V+R
Sbjct: 623 TLETGSGNARSAGESDSNNYNLRSVLTIAFQFTFENHLRDNVAVMARQYVRNVVR-SVQR 681

Query: 754 IKASLS 759
           +  +++
Sbjct: 682 VAMAIA 687



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGL----EPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R+++ RE  L    E  Q+K WFQN+R + K  
Sbjct: 23  KYVRYTPEQVEALERVYVECPKPSSSRRQQIIRECPLLANIETKQIKVWFQNRRCREK-- 80

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L+T N KL + N
Sbjct: 81  -QRKEASRLQTVNRKLSSMN 99


>gi|242067917|ref|XP_002449235.1| hypothetical protein SORBIDRAFT_05g006660 [Sorghum bicolor]
 gi|241935078|gb|EES08223.1| hypothetical protein SORBIDRAFT_05g006660 [Sorghum bicolor]
          Length = 114

 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 12/96 (12%)

Query: 392 MTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL---RPSPAVR-------CR 441
           M AE  V SP +  R+  ++RY K+  EG WAV+DVS+D +   R + A         CR
Sbjct: 1   MNAELWVQSPRLLKRKINFLRYNKRVAEGQWAVMDVSVDGILGRRTTDAAVVANNTTGCR 60

Query: 442 RRPSGCLIQEM--PNGYSKVTWVEHVEVDDRGVHNL 475
             PS CLI++M   NGY K+TWV H E D+  V  L
Sbjct: 61  LLPSDCLIEDMGKGNGYYKITWVVHAEYDETMVPTL 96


>gi|357146669|ref|XP_003574071.1| PREDICTED: homeobox-leucine zipper protein HOX9-like [Brachypodium
           distachyon]
          Length = 841

 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 122/302 (40%), Gaps = 36/302 (11%)

Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
           GI     G +  A+R   +V +    +VEIL D   W            +LEV +   AG
Sbjct: 202 GIVAISHGCRGVAARACGLVNLEPTKIVEILKDRPSW-------FRDCRSLEVFTQLPAG 254

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVD-------VSLDNLRPSP 436
           N  G ++++  +   P+ LVP R+ + +RY     +G+  V +                 
Sbjct: 255 N-GGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQ 313

Query: 437 AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD 496
            VR    PSG L++    G S V  V+H++++   V  + + L  +      K   A L 
Sbjct: 314 FVRAEMLPSGYLVRPCDGGGSIVHMVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAAL- 372

Query: 497 RQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLS 554
           R   ++A   +        G +    GR+   +   ++R+   F   +S      W+ + 
Sbjct: 373 RHIRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMG 424

Query: 555 GTGADDVRVMT-----RKSVDDPG---RPPGIVLSAATSFWLPVPPKRVFDFLRDENTRS 606
           G G +DV +       R +   P     P G++ + A+     VPP  +  FLR+   RS
Sbjct: 425 GDGIEDVIIACNSKKIRSNTAAPSAFESPGGVICAKASMLLQSVPPAVLVRFLREH--RS 482

Query: 607 EW 608
           EW
Sbjct: 483 EW 484



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +E  Q+K WFQN+R + K  
Sbjct: 31  KYVRYTPEQVEALERVYAECPKPTSTRRQQLLRECPILSNIEARQIKVWFQNRRCRDK-- 88

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E+++L+  N KL A N
Sbjct: 89  -QRKESSRLQAVNRKLSAMN 107


>gi|270271303|gb|ACZ67180.1| transcription factor HEX, partial [Populus nigra]
          Length = 64

 Score = 69.3 bits (168), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 2/65 (3%)

Query: 148 QHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLR 207
           Q +R +N  LR ENE L+ DN R +  L +  CPNCGG   +G + F+E  LRLENARLR
Sbjct: 2   QQDRSDNLILRAENESLKNDNYRLQAELRSLICPNCGGQAMLGAIPFEE--LRLENARLR 59

Query: 208 EEIDR 212
           +E++R
Sbjct: 60  DELER 64


>gi|45479746|gb|AAS66760.1| PHAVOLUTA-like HD-ZIPIII protein [Nicotiana sylvestris]
          Length = 843

 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 179/484 (36%), Gaps = 104/484 (21%)

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C   A+R   +V +    + EIL D   W             L +LS 
Sbjct: 193 PDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSW-------YRDCRCLNILSV 245

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-- 437
              GN  G ++++  +   P+ L   R+ + +RY     +G+  + + SL      P   
Sbjct: 246 IPTGN-GGTIELIYLQTYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTTATGGPTGP 304

Query: 438 -----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                VR    PSG LI+    G S +  V+H+++D   V  + + L  +      K  V
Sbjct: 305 PATSFVRAEMLPSGYLIRPCEGGGSMIHIVDHIDLDAWSVPEVLRPLYESSKILAQKTTV 364

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTW 550
           A L R   ++A   +        G I    GR+   +  L++R+   F   V+      W
Sbjct: 365 AAL-RHIRQIAQETS--------GEIQYTGGRQPAVLRALSQRLCRGFNDAVNGFVDDGW 415

Query: 551 TTLSGTGADDVRVMTRKS--------VDDPGRPP---GIVLSAATSFWLPVPPKRVFDFL 599
           T +   G +DV V    S         +     P   G++ + A+     VPP  +  FL
Sbjct: 416 TVMDSDGVEDVTVAINSSSTKFLGSQYNTLSILPTFGGVLCARASMLLQNVPPALLVRFL 475

Query: 600 RDENTRSEW-----DILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQ------ 648
           R+   RSEW     D  S   +      +   R  G   S + +   Q+    +      
Sbjct: 476 REH--RSEWADYGVDAYSAASLKASPYAVPCARPGGFPSSQVILPLAQTVEHEEFLEVVR 533

Query: 649 --------------SNMLILQE-SCTDPTAS----FVIYAPVDIVAMNVVLNGGDPDYVA 689
                          +M +LQ  S  D  AS     +++AP+D             D   
Sbjct: 534 LEGPAFSPEDIALSRDMYLLQLCSGVDENASGACAQLVFAPID---------ESFGDDAP 584

Query: 690 LLPSGFAILP-----DG----TSLHGANIGEAASGG---------------SLLTVAFQI 725
           LLPSGF ++P     DG     +L  A+  EA +GG               S+LT+AFQ 
Sbjct: 585 LLPSGFRVIPLEPKSDGPAATRTLDLASTLEAGTGGTRPAGEIEASNYNHRSVLTIAFQF 644

Query: 726 LVDS 729
             +S
Sbjct: 645 TFES 648



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 16  KYVRYTPEQVEALERVYAECPKPTSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 73

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L T N KL A N
Sbjct: 74  -QRKEASRLTTVNRKLSAMN 92


>gi|270271301|gb|ACZ67179.1| transcription factor HEX [Populus balsamifera]
          Length = 64

 Score = 68.9 bits (167), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 2/65 (3%)

Query: 148 QHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLR 207
           Q +R +N  LR ENE L+ DN R +  L    CPNCGG   +G + F+E  LRLENARLR
Sbjct: 2   QQDRSDNLILRAENESLKNDNYRLQAELRXLICPNCGGQAMLGAIPFEE--LRLENARLR 59

Query: 208 EEIDR 212
           +E++R
Sbjct: 60  DELER 64


>gi|449433543|ref|XP_004134557.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           ATHB-9-like [Cucumis sativus]
          Length = 847

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 123/309 (39%), Gaps = 41/309 (13%)

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C   A+R   +V +    + EIL D   W             L VLS 
Sbjct: 196 PDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRLSW-------YRDCRCLNVLSV 248

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-- 437
              GN  G ++++  +   P+ L   R+ + +RY     +G+  V + SL +    PA  
Sbjct: 249 IPTGN-GGTIELIYMQTYAPTTLAAARDFWTMRYTTSLEDGSLVVCERSLSSSSGGPAGP 307

Query: 438 -----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                VR    PSG LI+    G S +  V+H+++D   V  + + L  +      K  +
Sbjct: 308 PPSTFVRAEMLPSGYLIRACEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKILAQKITI 367

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTW 550
           A L R   ++A    TN      G I    GR+   +   ++++   F   V+      W
Sbjct: 368 AAL-RHIRQIAQ--ETN------GEIQCTGGRQPAVLRTFSQKLCRGFNDAVNGFADDGW 418

Query: 551 TTLSGTGADDVRVMTRKSVDD-----------PGRPPGIVLSAATSFWLPVPPKRVFDFL 599
           + +   G +DV ++   S +            P    G++ + A+     VPP  +  FL
Sbjct: 419 SPMGSDGVEDVTILINTSANKFSGSQYNTSLYPSFGGGVMCAKASMLLQNVPPALLVRFL 478

Query: 600 RDENTRSEW 608
           R+   RSEW
Sbjct: 479 REH--RSEW 485



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 83  DQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWF 138
           D   +     +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WF
Sbjct: 8   DTSNKQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWF 67

Query: 139 QNKRTQMKTQHERHENTQLRTENEKLRADN 168
           QN+R + K   +R E+++L++ N KL A N
Sbjct: 68  QNRRCREK---QRKESSRLQSVNRKLSAMN 94


>gi|356555875|ref|XP_003546255.1| PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Glycine
           max]
          Length = 846

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 118/309 (38%), Gaps = 41/309 (13%)

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C   A+R   +V +    + EIL D   W             ++VLS 
Sbjct: 196 PDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRQSW-------YRDCRCVDVLSI 248

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-- 437
              GN  G +++M  +   P+ L   R+ + +RY     +G+  + + SL +    PA  
Sbjct: 249 VPTGN-GGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPAGP 307

Query: 438 -----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                VR    PSG LI+    G S +  V+H+++D   V  + + L  +      K  +
Sbjct: 308 PSTTFVRAEMLPSGFLIRPCEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKILAQKLTI 367

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTW 550
           A L              I     G I    GR+   +   ++R+   F   V+      W
Sbjct: 368 AALQH---------IRQIALESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGW 418

Query: 551 TTLSGTGADDVRVMTRKSVDD-----------PGRPPGIVLSAATSFWLPVPPKRVFDFL 599
           + +   G +DV +    S +            P    G++ + A+     VPP  +  FL
Sbjct: 419 SLMGTDGVEDVTIAINSSPNKFLGSNYNASMFPAFGGGVLCAKASMLLQNVPPALLVRFL 478

Query: 600 RDENTRSEW 608
           R+   RSEW
Sbjct: 479 REH--RSEW 485



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L+T N KL A N
Sbjct: 76  -QRKEASRLQTVNRKLTAMN 94


>gi|255564395|ref|XP_002523194.1| conserved hypothetical protein [Ricinus communis]
 gi|223537601|gb|EEF39225.1| conserved hypothetical protein [Ricinus communis]
          Length = 771

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 122/309 (39%), Gaps = 41/309 (13%)

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C   A+R   +V +    + EIL D   W             L+ LS 
Sbjct: 201 PDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSW-------FRDCRCLDTLSV 253

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR------ 433
              GN  G ++++  +   P+ L   RE + +RY     +G+  + + SL          
Sbjct: 254 IPTGN-GGTIELIYMQTYAPTTLAAAREFWTLRYTTTLEDGSLVICERSLTTTTGGPTGP 312

Query: 434 -PSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
             S  VR    PSG LI+    G S +  V+HV++D   V  + + L  +      K  +
Sbjct: 313 PASSFVRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTM 372

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTW 550
           A L R   ++A   +  I  G         GR+   +   ++R+   F   V+  +   W
Sbjct: 373 AAL-RHIRQIAQETSGEIQYG--------GGRQPAVLRTFSQRLCRGFNDAVNGFSDDGW 423

Query: 551 TTLSGTGADDVRVMTRKSVDD-----------PGRPPGIVLSAATSFWLPVPPKRVFDFL 599
           + L G G +DV ++   + +            P    G++ + A+     VPP  +  FL
Sbjct: 424 SLLGGDGVEDVTIVINSTPNKFLGSQYTTSMFPTFGGGVLCAKASMLLQNVPPALLVRFL 483

Query: 600 RDENTRSEW 608
           R+   RSEW
Sbjct: 484 REH--RSEW 490



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 24/139 (17%)

Query: 84  QEQRPNKK---KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKF 136
           +E   NK+    +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K 
Sbjct: 11  KEANSNKQMDSSKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKV 70

Query: 137 WFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDE 196
           WFQN+R + K   +R E ++L+T N KL A N    E                  +    
Sbjct: 71  WFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQV 113

Query: 197 HHLRLENARLREEIDRISA 215
            HL  EN  +R+++   SA
Sbjct: 114 SHLVYENGYMRQQLQTASA 132


>gi|253758737|ref|XP_002488889.1| hypothetical protein SORBIDRAFT_2315s002010 [Sorghum bicolor]
 gi|241947279|gb|EES20424.1| hypothetical protein SORBIDRAFT_2315s002010 [Sorghum bicolor]
          Length = 105

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 56/126 (44%), Gaps = 40/126 (31%)

Query: 392 MTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------------- 437
           M AE  V SP +  R+  ++RY K+  EG WAV+DVS+D +   PA              
Sbjct: 1   MNAELWVQSPRLLKRKINFLRYNKRVAEGQWAVMDVSVDGILGPPAGSRTTDAAVVANNT 60

Query: 438 VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDR 497
             CR  PSGCLI++M  G                           G +FG  RW+ATL R
Sbjct: 61  TGCRLLPSGCLIEDMGKG--------------------------NGYSFGVHRWLATLQR 94

Query: 498 QCERLA 503
           Q E LA
Sbjct: 95  QYEYLA 100


>gi|168828707|gb|ACA33840.1| class III HD-Zip transcription factor HDZ31 [Pinus pinaster]
          Length = 628

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 115/515 (22%), Positives = 196/515 (38%), Gaps = 106/515 (20%)

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C   A+R   +V ++   + EIL D   W       +     L+VL+ 
Sbjct: 38  PDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDRPSW-------LRDCRCLDVLTA 90

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-- 437
              GN  G ++++  +    + L   R+ + +RY     +G+  V + SL   +  P+  
Sbjct: 91  FPTGN-GGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIP 149

Query: 438 -----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                VR    PSG LIQ    G S +  V+H++++   V  + + L  +      K  +
Sbjct: 150 PVQHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTI 209

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWT 551
           A L R+  ++A        TGEV  +     + ++L+  ++R+   F   V+  T   W+
Sbjct: 210 AAL-RRLRQIAQEA-----TGEV--VFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWS 261

Query: 552 TLSGTGADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFL 599
            +   G +DV +    S +                  GI+ + A+     VPP  +  FL
Sbjct: 262 LMGSDGVEDVTIAINSSPNKHFAYQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFL 321

Query: 600 RDENTRSEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVS 634
           R+   RSEW                            S   V+  +AH     +    + 
Sbjct: 322 REH--RSEWADSNIDAYSAAALKSSPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIK 379

Query: 635 LLRVNCLQSANSSQSNMLILQ------ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYV 688
           L      Q       +M +LQ      E      A  V +AP+D             D  
Sbjct: 380 LEGHGLTQEEAVLSRDMFLLQLCSGIDEHAAGACAELV-FAPID---------ESFADDA 429

Query: 689 ALLPSGFAILP-----DGT-----SLHGANIGEAASGG--------------SLLTVAFQ 724
            LLPSGF ++P     DG+     +L  A+  E  S G              S+LT+AFQ
Sbjct: 430 PLLPSGFRVIPLESRTDGSGGPNRTLDLASALEVGSTGTRTSGDSGTNSNLRSVLTIAFQ 489

Query: 725 ILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
              +S     ++  +   V +++A +V+R+  +L+
Sbjct: 490 FTYESHSRENVAAMARQYVRSVVA-SVQRVAMALA 523


>gi|224056521|ref|XP_002298892.1| predicted protein [Populus trichocarpa]
 gi|60327627|gb|AAX19053.1| class III HD-Zip protein 4 [Populus trichocarpa]
 gi|222846150|gb|EEE83697.1| predicted protein [Populus trichocarpa]
          Length = 844

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 123/309 (39%), Gaps = 41/309 (13%)

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C   A+R   +V +    + EIL D   W             L++LS 
Sbjct: 194 PDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSW-------FRDCRCLDILSV 246

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR------ 433
              G+  G ++++  +   P+ L   R+ + +RY     +G+  + + SL +        
Sbjct: 247 IPTGS-GGTIELIYMQTYAPTTLAAARDFWTLRYTTTLEDGSLVICERSLTSSTGGPTGP 305

Query: 434 -PSPAVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
            PS  +R    PSG LI+      S +  V+HV++D   V  + + L  +      K  +
Sbjct: 306 PPSSFIRAEMLPSGYLIRPCEGSGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKMTM 365

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTW 550
           A L R   ++A   +  I  G         GR+   +   ++R+   F   V+  T   W
Sbjct: 366 AAL-RHIRQIAQETSGEIQYG--------GGRQPAVLRTFSQRLCRGFNDAVNGFTDDGW 416

Query: 551 TTLSGTGADDVRVMTRKSVDD-----------PGRPPGIVLSAATSFWLPVPPKRVFDFL 599
           + L   G DDV ++   S +            P    G++ + A+     VPP  +  FL
Sbjct: 417 SLLGSDGGDDVTIVINSSPNKFLGSQYNASMFPTFGGGVLCAKASMLLQNVPPALLVRFL 476

Query: 600 RDENTRSEW 608
           R+   RSEW
Sbjct: 477 REH--RSEW 483



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 21/127 (16%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 16  KYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 73

Query: 149 HERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 208
            +R E ++L+T N KL A N    E                  +     HL  EN  +R+
Sbjct: 74  -QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSHLVYENGFMRQ 118

Query: 209 EIDRISA 215
           +I   SA
Sbjct: 119 QIQTASA 125


>gi|125532383|gb|EAY78948.1| hypothetical protein OsI_34053 [Oryza sativa Indica Group]
          Length = 799

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 104/459 (22%), Positives = 170/459 (37%), Gaps = 105/459 (22%)

Query: 350 LVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESY 409
           +VEIL D   W            +LEV +   AGN  G ++++  +   P+ LVP R+ +
Sbjct: 185 IVEILKDRPSW-------FRDCRSLEVFTMFPAGN-GGTIELVYMQMYAPTTLVPARDFW 236

Query: 410 YVRYCKQHGEGTWAVVD-------VSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKVTWV 462
            +RY     +G+  V +                  VR    PSG L++    G S V  V
Sbjct: 237 TLRYTTTMDDGSLVVCERSLSGSGGGPSTASAQQFVRAEMLPSGYLVRPCEGGGSIVHIV 296

Query: 463 EHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQD 522
           +H++++   V  + + L  +      K   A L R   ++A   +        G +    
Sbjct: 297 DHLDLEAWSVPEVLRPLYESSRVVAQKMTTAAL-RHIRQIAQETS--------GEVVYAL 347

Query: 523 GRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVM--------TRKSVDDP 572
           GR+   +   ++R+   F   +S      W+ + G G +DV +         T  S +  
Sbjct: 348 GRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNAKKVRNTSTSANAF 407

Query: 573 GRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDI---------------------- 610
             P G++ + A+     VPP  +  FLR+   RSEW                        
Sbjct: 408 VTPGGVICAKASMLLQSVPPAVLVRFLREH--RSEWADYNFDAYSASSLKTSSCSLPGLR 465

Query: 611 ---LSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCTD------P 661
               S   ++  +AH     +    V  L    L   +   S  + L + CT        
Sbjct: 466 PMRFSGSQIIMPLAHTVENEEILEVVR-LEGQALTHDDGLMSRDIHLLQLCTGIDEKSMG 524

Query: 662 TASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-----DGT----SLHGANIGEA 712
           +   +++AP+D +          PD   L+ SGF ++P     DGT    +L  A+  E 
Sbjct: 525 SCFQLVFAPIDELF---------PDDAPLISSGFRVIPLDMKTDGTPAGRTLDLASSLEV 575

Query: 713 ASGG--------------SLLTVAFQI-----LVDSVPT 732
            S                S+LT+AFQ      L DSV T
Sbjct: 576 GSTAQPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVAT 614



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L R+      +EP Q+K WFQN+R + K  
Sbjct: 5   KYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCRDK-- 62

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L+  N KL A N
Sbjct: 63  -QRKEASRLQAVNRKLTAMN 81


>gi|302757695|ref|XP_002962271.1| hypothetical protein SELMODRAFT_403927 [Selaginella moellendorffii]
 gi|300170930|gb|EFJ37531.1| hypothetical protein SELMODRAFT_403927 [Selaginella moellendorffii]
          Length = 139

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 52/74 (70%), Gaps = 5/74 (6%)

Query: 676 MNVVLNGGDPDYVALLPSGFAILPDGTSLHG-ANIGEAASGGSLLTVAFQILVDSVPTAK 734
           +N+++ GGDP +V +LPSGF ILPDG+  H  +++ +  +  +LLTVA QIL    P+AK
Sbjct: 2   INMMIQGGDPAHVDVLPSGFVILPDGSEPHSTSSVLQNDATSTLLTVAVQIL----PSAK 57

Query: 735 LSLGSVATVNNLIA 748
           LSL S+  +N LI+
Sbjct: 58  LSLDSIVAINTLIS 71


>gi|37694044|gb|AAQ98963.1| homeodomain leucine-zipper protein Hox9 [Oryza sativa Japonica
           Group]
          Length = 840

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 121/302 (40%), Gaps = 36/302 (11%)

Query: 324 GIGPKPTGFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
           GI     G +  A+R   +V +    +VEIL D   W            +LEV +   AG
Sbjct: 200 GIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSW-------FRDCRSLEVFTMFPAG 252

Query: 384 NYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVD-------VSLDNLRPSP 436
           N  G ++++  +   P+ LVP R+ + +RY     +G+  V +                 
Sbjct: 253 N-GGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQ 311

Query: 437 AVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLD 496
            VR     SG L++    G S V  V+H++++   V  + + L  +      K   A L 
Sbjct: 312 FVRAEMLTSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAAL- 370

Query: 497 RQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLS 554
           R   ++A   +        G +    GR+   +   ++R+   F   +S      W+ + 
Sbjct: 371 RHIRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMG 422

Query: 555 GTGADDVRVM--------TRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRS 606
           G G +DV +         T  S +    P G++ + A+     VPP  +  FLR+   RS
Sbjct: 423 GDGIEDVIIACNARKVRNTSTSANAFVTPGGVICAKASMLLQSVPPAVLVRFLREH--RS 480

Query: 607 EW 608
           EW
Sbjct: 481 EW 482



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L R+      +EP Q+K WFQN+R + K  
Sbjct: 29  KYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCRDK-- 86

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L+  N KL A N
Sbjct: 87  -QRKEASRLQAVNRKLTAMN 105


>gi|253761856|ref|XP_002489302.1| hypothetical protein SORBIDRAFT_0010s004460 [Sorghum bicolor]
 gi|241946950|gb|EES20095.1| hypothetical protein SORBIDRAFT_0010s004460 [Sorghum bicolor]
          Length = 274

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/39 (66%), Positives = 34/39 (87%)

Query: 412 RYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQ 450
           +YCKQ+ +GTWA+VDVSLD+LRP   ++CRR PSGCLI+
Sbjct: 228 KYCKQNADGTWAIVDVSLDSLRPRSVLKCRRWPSGCLIE 266


>gi|34393689|dbj|BAC83419.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|50508866|dbj|BAD31643.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 125

 Score = 66.6 bits (161), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 2/84 (2%)

Query: 63  EEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE 122
           E+  +     + ++   S + Q++  NK  R  RHT  QI+ +E+ F+ C +    QR +
Sbjct: 26  EDRTEEADDAAVDYHDDSSEGQDEVSNK--RMKRHTDDQIKHLESVFERCTYLGGNQRVQ 83

Query: 123 LSRELGLEPLQVKFWFQNKRTQMK 146
           L+++LG+E  QVKFWFQN+RT+ K
Sbjct: 84  LAKKLGMEERQVKFWFQNRRTRKK 107


>gi|110349514|gb|ABG73232.1| class III HD-Zip protein HDZ32 [Selaginella kraussiana]
          Length = 820

 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 97/444 (21%), Positives = 178/444 (40%), Gaps = 79/444 (17%)

Query: 336 ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 395
           A+R   +V +  I + EIL D   W       +     LEV+ T    N  G L+++ ++
Sbjct: 224 AARAVGLVDLEPIRVAEILKDRPSW-------LWDCRRLEVVGTFPTPN-GGTLELIYSQ 275

Query: 396 FQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL----RPSPAV-RCRRRPSGCLIQ 450
              P+ L P R+ + +RY     + +  V + SL       +  P   R    PSG LI+
Sbjct: 276 MYAPTTLAPARDFWTLRYTIFLEDRSLVVCEKSLTGAHGKHKGGPDFERAEMLPSGFLIR 335

Query: 451 EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI 510
               G S +  V+H +++   V  + + L  + + F A+R      +  +R+     +  
Sbjct: 336 PYEGGVSSIHIVDHYDLESWRVLEVLRPLYES-SVFLAQRVTIAALQHLKRI-----SQE 389

Query: 511 PTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 570
            +GE+ +   Q    ++   + R+   F   V+      W +L   G D V +    SV 
Sbjct: 390 SSGEILLRGGQQP-AALRAFSHRIARGFNDAVNGFAEDGWVSLVADGIDTVSITINTSVA 448

Query: 571 DPGRP-------------PGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVV 617
               P              GI+ + ++     VPP  +  FLR+   RSEW +  N    
Sbjct: 449 SKALPGNQVWPDRFSNNISGILCAKSSMLLQNVPPATLIRFLREH--RSEW-VGCNSATS 505

Query: 618 QEMAHI-------ANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCT------DPTAS 664
             ++ +       + G +    + ++++    S +  +  +L+  + CT        T +
Sbjct: 506 DSVSALRISGYGTSKGDEEPELLEVIKMEGYGSQSVPKDTVLL--QLCTGYTDNVSGTCA 563

Query: 665 FVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP----------------DGTSLHGAN 708
            +I+APVD    N          + LLPSGF ++P                  ++L  A 
Sbjct: 564 QLIFAPVDPAVTN---------DMPLLPSGFRVIPLDSGSALPTKLAPTLDLASTLDTAK 614

Query: 709 IGEAASGG---SLLTVAFQILVDS 729
             + +S     S+LT+AFQ + ++
Sbjct: 615 FPDDSSSAHCRSVLTMAFQFVFEA 638



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R+++ R+      +EP Q+K WFQN+R + K  
Sbjct: 15  KYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLANIEPRQIKVWFQNRRCREK-- 72

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L++ N  L A N
Sbjct: 73  -QRKETSRLQSVNSSLTAMN 91


>gi|356533043|ref|XP_003535078.1| PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Glycine
           max]
          Length = 846

 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L+T N KL A N
Sbjct: 76  -QRKEASRLQTVNRKLTAMN 94



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 121/311 (38%), Gaps = 45/311 (14%)

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C   A+R   +V +    + EIL D   W             ++VLS 
Sbjct: 196 PDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRQSW-------YRDCRCVDVLSI 248

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-- 437
              GN  G ++++  +   P+ L   R+ + +RY     +G+  + + SL +    P   
Sbjct: 249 VPTGN-GGTIELLYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGP 307

Query: 438 -----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                VR    PSG L++    G S +  V+H+++D   V  + + L  +      K  +
Sbjct: 308 PSTTFVRAEMLPSGFLVRPCEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKFLAQKLTI 367

Query: 493 ATLD--RQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAH 548
           A L   RQ  + +S           G I    GR+   +   ++R+   F   V+     
Sbjct: 368 AALQHIRQIAQESS-----------GEIQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDD 416

Query: 549 TWTTLSGTGADDVRVMTRKSVDD-----------PGRPPGIVLSAATSFWLPVPPKRVFD 597
            W+ +   G +DV +    S +            P    G++ + A+     VPP  +  
Sbjct: 417 GWSLMGTDGVEDVTIAINSSPNKFLGSNYNASMFPAFGGGVLCAKASMLLQNVPPALLVR 476

Query: 598 FLRDENTRSEW 608
           FLR+   RSEW
Sbjct: 477 FLREH--RSEW 485


>gi|222424857|dbj|BAH20380.1| AT1G52150 [Arabidopsis thaliana]
          Length = 702

 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 122/550 (22%), Positives = 214/550 (38%), Gaps = 115/550 (20%)

Query: 290 LIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNH 347
           L+ +A+     +++   GTA    +   ++  P  IG       C   A+R   +V +  
Sbjct: 24  LLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEP 83

Query: 348 ISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRE 407
             + EI+ D   W             +EV++     N  G ++++  +   P+ L P R+
Sbjct: 84  TRVAEIVKDRPSW-------FRECRAVEVMNVLPTAN-GGTVELLYMQLYAPTTLAPPRD 135

Query: 408 SYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVT 460
            + +RY     +G+  V + SL + +  P+       VR     SG LI+    G S + 
Sbjct: 136 FWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAEMLSSGYLIRPCDGGGSIIH 195

Query: 461 WVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLAS-VMATNIPTGEVGVIT 519
            V+H++++   V  + + L  +      K  +A L RQ +++A  V  TN          
Sbjct: 196 IVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAAL-RQLKQIAQEVTQTNSS-------V 247

Query: 520 NQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDD------ 571
           N  GR+  ++  L++R+   F   V+  T   W+ + G   DDV +    S D       
Sbjct: 248 NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVI-GDSMDDVTITVNSSPDKLMGLNL 306

Query: 572 ---PGRPP--GIVLSAATSFWLP-VPPKRVFDFLRDENTRSEW---DILS---------- 612
               G  P   +VL A  S  L  VPP  +  FLR+   RSEW   +I +          
Sbjct: 307 TFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDAYLAAAVKVGP 364

Query: 613 --------NGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLI-----LQESCT 659
                    G V+  +AH     +       + V  L+    S  + ++     L + C+
Sbjct: 365 CSARVGGFGGQVILPLAHTIEHEE------FMEVIKLEGLGHSPEDAIVPRDIFLLQLCS 418

Query: 660 D------PTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-------------- 699
                   T + +I+AP+D             D   LLPSGF I+P              
Sbjct: 419 GMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSAKEVSSPNRTL 469

Query: 700 ----------DGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIAC 749
                      GT       G +    S++T+AF+  ++S     ++  +   V  +I+ 
Sbjct: 470 DLASALEIGSAGTKASTDQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQYVRGIIS- 528

Query: 750 TVERIKASLS 759
           +V+R+  +LS
Sbjct: 529 SVQRVALALS 538


>gi|90110444|gb|ABD90524.1| class III homeodomain-leucine zipper [Selaginella kraussiana]
          Length = 820

 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 97/444 (21%), Positives = 177/444 (39%), Gaps = 79/444 (17%)

Query: 336 ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 395
           A+R   +V +  I + EIL D   W       +     LEV+ T    N  G L+++ + 
Sbjct: 224 AARAVGLVDLEPIRVAEILKDRPSW-------LWDCRRLEVVGTFPTPN-GGTLELIYSR 275

Query: 396 FQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL----RPSPAV-RCRRRPSGCLIQ 450
              P+ L P R+ + +RY     + +  V + SL       +  P   R    PSG LI+
Sbjct: 276 MYAPTTLAPARDFWTLRYTIFLEDRSLVVCEKSLTGAHGKHKGGPDFERAEMLPSGFLIR 335

Query: 451 EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI 510
               G S +  V+H +++   V  + + L  + + F A+R      +  +R+     +  
Sbjct: 336 PYEGGVSSIHIVDHYDLESWRVLEVLRPLYES-SVFLAQRVTIAALQHLKRI-----SQE 389

Query: 511 PTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 570
            +GE+ +   Q    ++   + R+   F   V+      W +L   G D V +    SV 
Sbjct: 390 SSGEILLRGGQQP-AALRAFSHRIARGFNDAVNGFAEDGWVSLVADGIDTVSITINTSVA 448

Query: 571 DPGRP-------------PGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVV 617
               P              GI+ + ++     VPP  +  FLR+   RSEW +  N    
Sbjct: 449 SKALPGNQVWPDRFSNNISGILCAKSSMLLQNVPPATLIRFLREH--RSEW-VGCNSATS 505

Query: 618 QEMAHI-------ANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCT------DPTAS 664
             ++ +       + G +    + ++++    S +  +  +L+  + CT        T +
Sbjct: 506 DSVSALRISGYGTSKGDEEPELLEVIKMEGYGSQSVPKDTVLL--QLCTGYTDNVSGTCA 563

Query: 665 FVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP----------------DGTSLHGAN 708
            +I+APVD    N          + LLPSGF ++P                  ++L  A 
Sbjct: 564 QLIFAPVDPAVTN---------DMPLLPSGFRVIPLDSGSALPTKLAPTLDLASTLDTAK 614

Query: 709 IGEAASGG---SLLTVAFQILVDS 729
             + +S     S+LT+AFQ + ++
Sbjct: 615 FPDDSSSAHCRSVLTMAFQFVFEA 638



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R+++ R+      +EP Q+K WFQN+R + K  
Sbjct: 15  KYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLANIEPRQIKVWFQNRRCREK-- 72

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L++ N  L A N
Sbjct: 73  -QRKETSRLQSVNSSLTAMN 91


>gi|302772080|ref|XP_002969458.1| hypothetical protein SELMODRAFT_146209 [Selaginella moellendorffii]
 gi|110349516|gb|ABG73233.1| class III HD-Zip protein HDZ31 [Selaginella moellendorffii]
 gi|300162934|gb|EFJ29546.1| hypothetical protein SELMODRAFT_146209 [Selaginella moellendorffii]
          Length = 855

 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 114/494 (23%), Positives = 195/494 (39%), Gaps = 101/494 (20%)

Query: 336 ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 395
           A+R   +V +    + EIL D + W       +     LEVL      N  G ++++  +
Sbjct: 235 AARAWGLVGLEPDKVAEILKDRSSW-------LRDCRRLEVLRAFPTPN-GGTVELVYTQ 286

Query: 396 FQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VRCRRRPSGCL 448
              P+ L   R+ + +RY     EG   V + SL  +   PA       VR     SG L
Sbjct: 287 MYAPTTLAAARDFWTLRYTTFLDEGDLVVCEKSLSGVHGLPAAKAGNDFVRAEMLASGFL 346

Query: 449 IQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERL--ASVM 506
           I+        +  V+H++++   VH + + L  + +    +  +  L R   RL   S +
Sbjct: 347 IRPFEGNVCSIYIVDHMDLESWKVHEVLRPLYESSSVLAQRMTLGAL-RFLRRLIYESPL 405

Query: 507 ATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVM-- 564
             N P G            +   ++ R+   F   V++     W        D    +  
Sbjct: 406 NENAPRG-------AQQSAAWRGVSRRIARGFNEAVNSFADDGWMITDAIDGDVTVAINV 458

Query: 565 --TRKSVDDPGRPP--------GIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNG 614
                S+     PP        G++ + A+     VPP  +  FLR+   RSEW   ++ 
Sbjct: 459 APNASSIGGQVMPPDRLYAVGGGVLCAKASMLLQNVPPATLIRFLREH--RSEW---ADC 513

Query: 615 GVVQEMAHI---ANGRDTGNCVSLLRVNCLQSAN--------------SSQSNMLILQES 657
            VV + A +   A G   GN +    V  +QSA               S Q+ ++I +E+
Sbjct: 514 NVVLDTASMRASACGFSRGNVIGQCPVPLVQSAEEEEFLEVVKLEGHASGQNGVVIPRET 573

Query: 658 -----CT--DPTASFV----IYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-----DG 701
                C+  D  A+ V    ++APVD             + V LLPSGF ++P     D 
Sbjct: 574 VLLQLCSGHDDNATGVCAQLVFAPVDAAV---------SEDVPLLPSGFRVIPLDSGVDS 624

Query: 702 TSLH-----------GANIGEAASGG-----SLLTVAFQILVDSVPTAKLSLGSVATVNN 745
           + L            GA+IG+          S+LT+AFQ L ++    +++  +   V +
Sbjct: 625 SGLSRTLDLASSLEGGADIGKFPDESGCHLRSVLTLAFQFLFEAHNRDEVATSARQYVRH 684

Query: 746 LIACTVERIKASLS 759
           ++A +V+ I  +L+
Sbjct: 685 VMA-SVQSIAMALA 697



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYIRYTPEQVEALERVYNECPKPSSIRRQQLLREYPVLANIEPRQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L++ N  L A N
Sbjct: 76  -QRKETSRLQSVNASLTAMN 94


>gi|89514859|gb|ABD75304.1| class III homeodomain-leucine zipper protein C3HDZ3 [Psilotum
           nudum]
          Length = 856

 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 15/100 (15%)

Query: 73  SENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----G 128
           S+  +G  GD     P K   Y R+T  Q+Q +E  + ECP+P   +R +L ++      
Sbjct: 4   SKQKDGKLGD-----PGK---YVRYTHEQVQLLERLYNECPNPSSFRRLQLLKDCPILSN 55

Query: 129 LEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
           +EP Q+K WFQN+R + K   +R E+++L + NEKL A N
Sbjct: 56  IEPKQIKVWFQNRRCRDK---QRKESSRLVSLNEKLSAMN 92



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 111/479 (23%), Positives = 184/479 (38%), Gaps = 100/479 (20%)

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C+  A+R   +V +    + ++L D   W       +     ++VL+ 
Sbjct: 211 PDSIGIVAISHGCDGIAARACGLVGLEPFKIAKLLKDRTSW-------LRDCRRMDVLAE 263

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVV---DVSLDNLRPSP 436
               +  G L+++  +   P+ L   R+   +RY     EG   VV      + N  P+ 
Sbjct: 264 -FNTDAGGLLELLYIQMYTPTTLALPRDFCTLRY-TSFLEGRNVVVCERTFPVVNGVPTV 321

Query: 437 A-----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAF----- 486
           A     VR   + SG LI+   +  S V  V+H+++    V  + + L  + +       
Sbjct: 322 APVEHFVRAEMKSSGFLIRSYGSVGSIVHIVDHLDLQPGSVPEVLRPLYDSPSVLAQNMT 381

Query: 487 -GAKRWVATLDRQCER-LASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSA 544
            GA R++ +L ++ E  LA      +P               +  L +RM  SF   V++
Sbjct: 382 VGALRYLQSLGQEAEADLALGQGLQLPV--------------IRTLCQRMARSFNEAVNS 427

Query: 545 STAHTWTTLSGTGADDVRVMTRKSV------------DDPGRPPGIVLSAATSFWLP-VP 591
                W++L+  G DDV ++   SV            D      G VL A TS  L  VP
Sbjct: 428 LPDDGWSSLASDGMDDVSIVVNASVSSGFSGQQLSLSDKLLSINGGVLCAKTSMLLQNVP 487

Query: 592 PKRVFDFLRDENTRSEW--------DILSNGGVVQEMAHIANGRDTGNCVSLLRVNCLQS 643
           P  +  FLR+   RSEW           + G  + +++       +   V LL  + L+ 
Sbjct: 488 PALLIRFLREH--RSEWADSEVDAEGTATIGSTIYDVSGFGRLGVSYAPVPLLLAHSLEQ 545

Query: 644 ANSSQSNM---LILQESCTDPTASFVIY-------APVDIVAMNVV--LNGGDPDYVALL 691
                  M     +Q+    P   F++        +PV   A  V   +N    + + LL
Sbjct: 546 ELLELLQMECSAFVQDGAVLPKDQFLMQLCTGLDESPVGASAQLVFAPVNVSISEDMPLL 605

Query: 692 PSGFAILPDGTSL---HGA----NIGEAASGG------------------SLLTVAFQI 725
           PSGF ++P   +L   +GA    ++  A  GG                  S+LT+AFQ 
Sbjct: 606 PSGFRVVPLDNNLLDGYGASRTLDLASALEGGSGVVTPVGDSGISTFPSRSILTIAFQF 664


>gi|349500387|dbj|BAL02986.1| class III homeodomain-leucine zipper protein, partial [Gnetum
           parvifolium]
          Length = 705

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 150/714 (21%), Positives = 250/714 (35%), Gaps = 176/714 (24%)

Query: 133 QVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEM 192
           Q+K WFQN+R + K   +R E ++L+T N KL A N    E                  +
Sbjct: 2   QIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEEND--------------RL 44

Query: 193 SFDEHHLRLENARLREEIDRISAIA-AKYVGKPVVNYPLLSP-PVPSRPLELAVGNFGAQ 250
                 L  EN  +R+++   +++A A    + VV      P P P  P           
Sbjct: 45  QKQVSQLVYENGYMRQQLHNAASVAGADTSCESVVTSGQHQPNPTPQHP----------- 93

Query: 251 PGIGGGEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAA 310
                               P +A    ++ +A   + E +  A+     W+  + G   
Sbjct: 94  --------------------PRDASPAGLLSIAEETLTEFLSKAKGAAVDWV-QMPG--- 129

Query: 311 VLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIV 368
                  ++  P  IG       C   A+R   +V +    + EIL D   W       +
Sbjct: 130 -------MKPGPDSIGIVAISNTCTGVAARACGLVGLEPTKVAEILKDRPSW-------L 175

Query: 369 SRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVS 428
                LEV++    GN  G ++V+  +   P+  +  R+ + +RY     +G+  V + S
Sbjct: 176 RDCRCLEVMTAYPTGN-GGTIEVLYMQTYAPTINLSARDFWSLRYTTVLDDGSLVVCERS 234

Query: 429 LDN-----LRPSPA--VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVS 481
           L +     + PS A  VR    PSG +IQ    G S +  V+H +++   V  + + L  
Sbjct: 235 LSSTLAGQVLPSVANFVRAEMLPSGYIIQPCEGGGSIIRIVDHFDLEPWSVPEVLRPLYE 294

Query: 482 TGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFC 539
           +      K  +A + R            I     G +    GR+   +   ++R+   F 
Sbjct: 295 SSTILAQKMTIAAMRR---------LRQIAQESSGEVVFGWGRQPAVLRTFSQRLSRGFN 345

Query: 540 AGVSASTAHTWT--TLSGTGADDVRVMTRKS-----------VDDPGRPPGIVLSAATSF 586
             V+      W+  T +    +DV +    S               G   GI+ + ++  
Sbjct: 346 EAVNGFADEGWSIMTTADGSVEDVTISINSSPTKHASAAAAAFSVFGSGGGILCAKSSML 405

Query: 587 WLPVPPKRVFDFLRDENTRSEW-------------------------DILSNGGVVQEMA 621
              VPP  +  FLR+   RSEW                            S   V+  +A
Sbjct: 406 LQNVPPALLIRFLREH--RSEWADSNIDAYSAAAIKSSPFTIPGTRAGSFSGSQVILPLA 463

Query: 622 HIANGRDTGNCVSLLRVNCLQSANSSQSNMLILQ------ESCTDPTASFVIYAPVDIVA 675
           H     +    + L              +M +LQ      ES     A  V+ AP+D   
Sbjct: 464 HTVENEEFLEVIKLDGHGLAHEDALLSRDMFLLQLCSGVDESAAGGCAELVL-APID--- 519

Query: 676 MNVVLNGGDPDYVALLPSGFAILP-----------DGTSLHGANIGEAASGG-------- 716
                     D   LLPSGF ++P            G +L  A+  E  SG         
Sbjct: 520 ------ESFADDAPLLPSGFRVIPLESRSDSPGANAGRTLDLASALEVGSGASRASNNSE 573

Query: 717 -----------SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
                      S+LT+AFQ   +S     ++  +   V + +A +V+R+  +LS
Sbjct: 574 GGAAGTNSNVRSVLTIAFQFSYESHLRENVAAMARQYVRS-VAASVQRVAMALS 626


>gi|168828723|gb|ACA33848.1| class III HD-Zip transcription factor HDZ31 [Pinus taeda]
          Length = 590

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 113/515 (21%), Positives = 196/515 (38%), Gaps = 106/515 (20%)

Query: 322 PRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLST 379
           P  IG       C   A+R   +V ++   + EI  D   W       +     L+VL+ 
Sbjct: 3   PDSIGIVAISNTCNGVAARACGLVGLDPTKVAEIFKDRPSW-------LRDCRCLDVLTA 55

Query: 380 GVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-- 437
              GN  G ++++  +    + L   R+ + +RY     +G+  V + SL   +  P+  
Sbjct: 56  FPTGN-GGTIELLYMQTYAATTLAFARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIP 114

Query: 438 -----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWV 492
                VR    PSG LIQ    G S +  V+H++++   V  + + L  +      K  +
Sbjct: 115 PVQHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTI 174

Query: 493 ATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWT 551
           A L R+  ++A        TGEV  +     + ++L+  ++R+   F   V+  T   W+
Sbjct: 175 AAL-RRLRQIAQEA-----TGEV--VFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWS 226

Query: 552 TLSGTGADDVRVMTRKSVDDPGRPP------------GIVLSAATSFWLPVPPKRVFDFL 599
            +   G +DV +    S +                  GI+ + A+     VPP  +  FL
Sbjct: 227 LMGSDGVEDVTIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFL 286

Query: 600 RDENTRSEWDI-------------------------LSNGGVVQEMAHIANGRDTGNCVS 634
           R+   RSEW                            S   V+  +AH     +    + 
Sbjct: 287 REH--RSEWADSNIDAYSAAALKSSPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIK 344

Query: 635 LLRVNCLQSANSSQSNMLILQ------ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYV 688
           L      Q       +M +LQ      E+     A  V +AP+D             D  
Sbjct: 345 LEGHGLTQEEAVLSRDMFLLQLCSGIDENAAGACAELV-FAPID---------ESFADDA 394

Query: 689 ALLPSGFAILP-----DGT-----SLHGANIGEAASGG--------------SLLTVAFQ 724
            LLPSGF ++P     DG+     +L  A+  E  S G              S+LT+AFQ
Sbjct: 395 PLLPSGFRVIPLESRTDGSGGPNRTLDLASALEVGSTGTRTSGDSGTSSNLRSVLTIAFQ 454

Query: 725 ILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
              +S     ++  +   V +++A +V+R+  +++
Sbjct: 455 FTYESHLRENVAAMARQYVRSVVA-SVQRVAMAIA 488


>gi|209171587|gb|ACI42914.1| tendril-less [Lens culinaris]
          Length = 237

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/106 (33%), Positives = 61/106 (57%)

Query: 74  ENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
           E ++  +G D  ++   K + ++ T +Q+  +E  F E    D +++ +LS ELGL+P Q
Sbjct: 54  ETNKINNGKDHREKKKTKTKKNKLTSNQVDALERSFNEEIKLDPERKMKLSAELGLQPRQ 113

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNAS 179
           V  WFQN+RT+ KT+   H    L+ EN+KL+ + +  +E L   S
Sbjct: 114 VAVWFQNRRTRWKTKQLEHSYDVLKQENQKLQEEVIELKEKLKEKS 159


>gi|300709018|ref|XP_002996678.1| hypothetical protein NCER_100211 [Nosema ceranae BRL01]
 gi|239605997|gb|EEQ83007.1| hypothetical protein NCER_100211 [Nosema ceranae BRL01]
          Length = 169

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 66  FDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
           F +    SEN     GD+Q   P   K   R T+ Q++ +E  F+ CP PD   RK+L+ 
Sbjct: 9   FSNYSPVSEN----GGDNQYYDPFYVKHRKRTTKAQLKVLEKTFENCPRPDSTMRKKLAD 64

Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHE 150
           +L + P  V+ WFQN+R ++K Q +
Sbjct: 65  QLSMTPRSVQVWFQNRRAKVKKQQQ 89


>gi|302755606|ref|XP_002961227.1| hypothetical protein SELMODRAFT_270225 [Selaginella moellendorffii]
 gi|300172166|gb|EFJ38766.1| hypothetical protein SELMODRAFT_270225 [Selaginella moellendorffii]
          Length = 855

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 114/494 (23%), Positives = 194/494 (39%), Gaps = 101/494 (20%)

Query: 336 ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 395
           A+R   +V +    + EIL D + W       +     LEVL      N  G ++++  +
Sbjct: 235 AARAWGLVGLEPDKVAEILKDRSSW-------LRDCRRLEVLRAFPTPN-GGTVELVYTQ 286

Query: 396 FQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VRCRRRPSGCL 448
              P+ L   R+ + +RY     EG   V + SL  +   PA       VR     SG L
Sbjct: 287 MYAPTTLAAARDFWTLRYTTFLDEGDLVVCEKSLSGVHGLPAAKAGNDFVRAEMLASGFL 346

Query: 449 IQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERL--ASVM 506
           I+        +  V+H++++   VH + + L  + +    +  +  L R   RL   S +
Sbjct: 347 IRPFEGNVCSIYIVDHMDLESWKVHEVLRPLYESSSVLAQRMTLGAL-RFLRRLIYESPL 405

Query: 507 ATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVM-- 564
             N P G            +   ++ R+   F   V++     W        D    +  
Sbjct: 406 NENAPRG-------AQQSAAWRGVSRRIARGFNEAVNSFADDGWMITDAIDGDVTVAINV 458

Query: 565 --TRKSVDDPGRPP--------GIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNG 614
                S+     PP        G++ + A+     VPP  +  FLR+   RSEW   ++ 
Sbjct: 459 APNASSIGGQVMPPDRLYAVGGGVLCAKASMLLQNVPPATLIRFLREH--RSEW---ADC 513

Query: 615 GVVQEMAHI---ANGRDTGNCVSLLRVNCLQSAN--------------SSQSNMLILQES 657
            VV + A +   A G   GN +    V  +QSA               S Q+ ++I +E+
Sbjct: 514 NVVLDTASMRASACGFSRGNVIGQCPVPLVQSAEEEEFLEVVKLEGHASGQNGVVIPRET 573

Query: 658 -----CT--DPTASFV----IYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-----DG 701
                C+  D  A  V    ++APVD             + V LLPSGF ++P     D 
Sbjct: 574 VLLQLCSGHDDNAMGVCAQLVFAPVDAAV---------SEDVPLLPSGFRVIPLDSGVDS 624

Query: 702 TSLH-----------GANIGEAASGG-----SLLTVAFQILVDSVPTAKLSLGSVATVNN 745
           + L            GA+IG+          S+LT+AFQ L ++    +++  +   V +
Sbjct: 625 SGLSRTLDLASSLEGGADIGKFPDESGCHLRSVLTLAFQFLFEAHNRDEVATSARQYVRH 684

Query: 746 LIACTVERIKASLS 759
           ++A +V+ I  +L+
Sbjct: 685 VMA-SVQSIAMALA 697



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYIRYTPEQVEALERVYNECPKPSSIRRQQLLREYPVLANIEPRQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L++ N  L A N
Sbjct: 76  -QRKETSRLQSVNASLTAMN 94


>gi|125558122|gb|EAZ03658.1| hypothetical protein OsI_25793 [Oryza sativa Indica Group]
          Length = 183

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 13/125 (10%)

Query: 92  KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
           KR  RHT  QI+ +E+ F+ C +    QR EL+++LG+E  Q+               ER
Sbjct: 53  KRMKRHTDDQIKHLESVFERCTYLGGNQRVELAKKLGMEERQM-------------HDER 99

Query: 152 HENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEID 211
            E   L+ EN+ L A+N   +EA+    C  CG P      +    +L  +N RL +E+ 
Sbjct: 100 QEGMWLQEENDVLHAENKVLKEAMWANICFTCGSPVVPAIPTVQHRYLSFQNMRLADELQ 159

Query: 212 RISAI 216
             +A+
Sbjct: 160 HATAV 164


>gi|357448593|ref|XP_003594572.1| Homeobox-leucine zipper protein ROC8 [Medicago truncatula]
 gi|355483620|gb|AES64823.1| Homeobox-leucine zipper protein ROC8 [Medicago truncatula]
          Length = 157

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 12/120 (10%)

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           + RH+  Q   +E  F    +P  +Q+ E+++EL LEP QV +WF  KR Q+K   ++  
Sbjct: 22  FPRHSPAQRLRLEEIFLTVKYPTHEQKNEIAKELDLEPKQVNWWFTYKRAQVKNATQKEV 81

Query: 154 NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRI 213
           N  LR E E L    +   E   N  C  C               LRLEN  L+E++ ++
Sbjct: 82  NAALRAEKEIL----LEMMERQKNVFCQACRDSRL--------KQLRLENELLKEKLSKL 129


>gi|110349560|gb|ABG73255.1| class III HD-Zip protein HDZ31 [Austrobaileya scandens]
          Length = 181

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R ++K  
Sbjct: 2   KYVRYTAEQVEALERVYTECPKPSSMRRQQLVRECSILANIEPKQIKVWFQNRRCRVK-- 59

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L+T N KL A N
Sbjct: 60  -QRKEASRLQTVNRKLTAMN 78


>gi|110349556|gb|ABG73253.1| class III HD-Zip protein HDZ32 [Cycas revoluta]
          Length = 392

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 91/443 (20%), Positives = 168/443 (37%), Gaps = 88/443 (19%)

Query: 137 WFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDE 196
           WFQN+R + K   +R E ++L+T N KL A N    E                       
Sbjct: 1   WFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLME----------------------- 34

Query: 197 HHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGG 256
                EN RL++++ ++      Y  + + N              +A  +   +  +  G
Sbjct: 35  -----ENDRLQKQVSQL-VYENGYFRQQLQNA------------SIATTDTSCESVVTSG 76

Query: 257 EMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDE 316
           + +     L     P +A    ++ +A   + E +  A            GTA    +  
Sbjct: 77  QHH-----LTPQHPPRDASPAGLLSIAEETLTEFLSKAT-----------GTAVEWIQMP 120

Query: 317 YVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTL 374
            ++  P  IG       C   A+R   +V +    + EIL D   W             +
Sbjct: 121 GMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTKVAEILKDRPSW-------FRDCRCV 173

Query: 375 EVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRP 434
           ++L+    GN  G ++++  +   P+ L   R+ + +RY     +G+  V + SL   + 
Sbjct: 174 DILTAFSTGN-GGTVELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLVVCERSLSGTQG 232

Query: 435 SPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFG 487
            P+       VR    PSG LI+    G S +  V+H++++   V  + + L  +     
Sbjct: 233 GPSMPPVPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLA 292

Query: 488 AKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSAS 545
            K  +A L R   ++A  ++ ++  G         GR+  ++    +R+   F   V+  
Sbjct: 293 QKTTMAAL-RHLRQIAQEISCDVVLGW--------GRQPAALRTFGQRLSKGFNEAVNGF 343

Query: 546 TAHTWTTLSGTGADDVRVMTRKS 568
           T   W+ +   G DDV V+   S
Sbjct: 344 TDDGWSLMGSDGMDDVTVLISSS 366


>gi|125569402|gb|EAZ10917.1| hypothetical protein OsJ_00759 [Oryza sativa Japonica Group]
          Length = 507

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      ++P Q+K WFQN+R + K  
Sbjct: 5   KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCREK-- 62

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E+++L+  N KL A N
Sbjct: 63  -QRKESSRLQALNRKLTAMN 81


>gi|56202112|dbj|BAD73204.1| putative homeobox leucine-zipper protein [Oryza sativa Japonica
           Group]
          Length = 886

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      ++P Q+K WFQN+R + K  
Sbjct: 5   KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCREK-- 62

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E+++L+  N KL A N
Sbjct: 63  -QRKESSRLQALNRKLTAMN 81



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 103/454 (22%), Positives = 180/454 (39%), Gaps = 112/454 (24%)

Query: 391 VMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR--PS-----PAVRCRRR 443
           V   +   P+ L P R+ + +RY     +G+  V + SL + +  PS     P +R    
Sbjct: 289 VFDLQLYAPTTLAPARDFWLLRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFIRGEML 348

Query: 444 PSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLA 503
           PSG LI+    G S +  V+H++++   V  + + L  +      K  +A L R   ++A
Sbjct: 349 PSGFLIRPSDVGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKISMAAL-RYLRQVA 407

Query: 504 SVMATNIPTGEVGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV 561
                ++ TG         GR+  ++  L++++   F   ++      W+ +   G DDV
Sbjct: 408 HEDTRSVITGW--------GRQPAALRALSQKLTRGFNEALNGLADDGWSVIESDGVDDV 459

Query: 562 -------RVMTRKSVDDPGRP---PGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW--- 608
                  +V+   +    G P    G++ + A+     V P  +  FLR+   RS+W   
Sbjct: 460 CISVNSSKVIGCNATFSSGLPIVSTGVLCAKASMLLQDVSPPSLLQFLREH--RSQWADS 517

Query: 609 --DIL-------------------SNGGVVQEMAHIANGRDTGNCVSLLRVNCLQSANSS 647
             D                      +G V+  +AH     +       L V  L +A++ 
Sbjct: 518 NLDAFFASTMKPNFCNLPMSRLGGFSGQVILPLAHTFEPEE------FLEVIKLGNASNY 571

Query: 648 QS-----NMLILQ-----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAI 697
           Q      ++ +LQ     E  +  T S +I+AP+D             D   LLPSGF I
Sbjct: 572 QDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPID---------ASFSDDSPLLPSGFRI 622

Query: 698 LP-----DGTS----LHGANIGEAASGGS-----------------------LLTVAFQI 725
           +P     D +S    L  A+  EAA+  S                       ++T+AFQ 
Sbjct: 623 IPIDSPLDTSSPNCTLDLASTLEAATPRSRISGVNGGGGGCAAAAASSSSKAVMTIAFQF 682

Query: 726 LVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 759
             D      ++  +   + N+I+ +V+RI  +LS
Sbjct: 683 AFDGHLQDSVAAMARQYMRNIIS-SVQRIAVALS 715


>gi|89514851|gb|ABD75300.1| class III homeodomain-leucine zipper protein C3HDZ1 [Selaginella
           kraussiana]
          Length = 820

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/395 (22%), Positives = 160/395 (40%), Gaps = 60/395 (15%)

Query: 336 ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 395
           A+R   +V +  I + EIL D   W       +     LEV+ T    +  G L+++ ++
Sbjct: 224 AARAVGLVDLEPIRVAEILKDRPSW-------LWDCRRLEVVGTFPTPS-GGTLELIYSQ 275

Query: 396 FQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNL----RPSPAV-RCRRRPSGCLIQ 450
              P+ L P R+ + +RY     + +  V + SL       +  P   R    PSG LI+
Sbjct: 276 MYAPTTLAPARDFWTLRYTIFLEDRSLVVCEKSLTGAHGKHKGGPDFERAEMLPSGFLIR 335

Query: 451 EMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNI 510
               G S +  V+H +++   V  + + L  + + F A+R      +  +R+     +  
Sbjct: 336 PYEGGVSSIHIVDHYDLESWRVLEVLRPLYES-SVFLAQRVTIAALQHLKRI-----SQE 389

Query: 511 PTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 570
            +GE+ +   Q    ++   + R+   F   V+      W +L   G D V +    SV 
Sbjct: 390 SSGEILLRGGQQP-AALRAFSHRIARGFNDAVNGFAEDGWVSLVADGIDTVSITINTSVA 448

Query: 571 DPGRP-------------PGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVV 617
               P              GI+ + ++     VPP  +  FLR+   RSEW +  N    
Sbjct: 449 SKALPGNQVWPDRFSNNISGILCAKSSMLLQNVPPATLIRFLREH--RSEW-VGCNSATS 505

Query: 618 QEMAHI-------ANGRDTGNCVSLLRVNCLQSANSSQSNMLILQESCT------DPTAS 664
             ++ +       + G +    + ++++    S +  +  +L+  + CT        T +
Sbjct: 506 DSVSALRISGYGTSKGDEEPELLEVIKMEGYGSQSVPKDTVLL--QLCTGYTDNVSGTCA 563

Query: 665 FVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 699
            +I+APVD    N          + LLPSGF ++P
Sbjct: 564 QLIFAPVDPAVTN---------DMPLLPSGFRVIP 589



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R+++ R+      +EP Q+K WFQN+R + K  
Sbjct: 15  KYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLANIEPRQIKVWFQNRRCREK-- 72

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L++ N  L A N
Sbjct: 73  -QRKETSRLQSVNSSLTAMN 91


>gi|357448589|ref|XP_003594570.1| Homeobox-leucine zipper protein ROC1 [Medicago truncatula]
 gi|355483618|gb|AES64821.1| Homeobox-leucine zipper protein ROC1 [Medicago truncatula]
          Length = 160

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 9/137 (6%)

Query: 78  GASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFW 137
           G +  + +    ++  + RH+  Q   +E  F+   +P +KQ+ E++ ELGL+P QV +W
Sbjct: 6   GLAPTENKSSNEEQGAFPRHSPAQRLRLEEIFQTIKYPTNKQKSEIAEELGLQPKQVNWW 65

Query: 138 FQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEH 197
           F  KR  +K   ++  N   R E + L  +  R  E  +  SC  C              
Sbjct: 66  FTYKRGLVKNATQKEVNAAFRAEIQML-LEEKREMERQNRVSCQACRDSRL--------K 116

Query: 198 HLRLENARLREEIDRIS 214
            LRLEN  L+E++ +++
Sbjct: 117 QLRLENELLKEKLSKLN 133


>gi|89514861|gb|ABD75305.1| class III homeodomain-leucine zipper protein C3HDZ1 [Ceratopteris
           richardii]
          Length = 844

 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+TQ Q+Q +E  + ECP+P   +R +L RE      +EP Q+K WFQN   + K  
Sbjct: 17  KYVRYTQEQVQALERLYAECPNPSSFRRLQLLRECPILSKIEPKQIKVWFQNGGCRDK-- 74

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L   NEKL A N
Sbjct: 75  -QRKEASRLANLNEKLSAMN 93



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 124/300 (41%), Gaps = 51/300 (17%)

Query: 336 ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 395
           A+R   +V ++   +VE+L +   W       +S    +EV+ T  + +  G ++++  +
Sbjct: 217 AARACGLVGLDPAKIVELLKNRPLW-------LSDCRRMEVVGTCTSTS-GGMVELLYMQ 268

Query: 396 FQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSL-----DNLRPSP--AVRCRRRPSGCL 448
           F  P+ L   R+ Y +RY     +    V + SL     D + P P   VR +   SG L
Sbjct: 269 FYAPTTLAMPRDFYTLRYTTVLDDCNVVVCERSLPLSHGDPVLPPPDQFVRAKMHSSGYL 328

Query: 449 IQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAF------GAKRWVATLDRQCERL 502
           I+      S V  V+H+++    V  + + L  +          GA R++ T+    +  
Sbjct: 329 IRPYGGVGSIVYLVDHMDLQPETVPEVLRPLYESSPVLAQRVTMGAMRYLRTVAHDVDGD 388

Query: 503 ASVMATNIPTGEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVR 562
           +S +    P     VI           L +RM   F   ++  +   W+++   G DDV 
Sbjct: 389 SSPVRGLQP----AVIRT---------LTQRMARGFNEAINCLSDDGWSSMPSDGMDDVT 435

Query: 563 V------MTRKSVDD-------PGRPPGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEW 608
           +      ++R S          P    G VL A TS  L  VPP  +  FLR+   RSEW
Sbjct: 436 IAVNTYPVSRISQGQFLFCDRLPAASDG-VLCAKTSMLLQNVPPALLIRFLREH--RSEW 492


>gi|302763605|ref|XP_002965224.1| hypothetical protein SELMODRAFT_167294 [Selaginella moellendorffii]
 gi|300167457|gb|EFJ34062.1| hypothetical protein SELMODRAFT_167294 [Selaginella moellendorffii]
          Length = 778

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 104/464 (22%), Positives = 179/464 (38%), Gaps = 88/464 (18%)

Query: 324 GIGPKPTGFK-------CE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTL 374
           G+ P P  F        C+  A+R   +V +    +VE+L D   W         R+  +
Sbjct: 157 GMKPGPDSFGIVAISHGCDGIAARALGLVALEATRIVEVLKDKTSWL----WDCRRSDVI 212

Query: 375 EVLSTGVAGNYNGA-LQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN-- 431
            + S+      NG+ +++M  +   P+ L P R+   +R      +G   V + S+ +  
Sbjct: 213 HICSSE-----NGSTMEIMHTQLYAPTTLAPPRDFCTLRLTTSLEDGNLVVCERSISDAE 267

Query: 432 -LRPSPA----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAF 486
            L   P+    VR     SG L++    G   V  ++H+++    V  +  + +   ++ 
Sbjct: 268 CLSYVPSTQYFVRAEMLTSGYLVRPCEGGSCIVHIIDHLDLKPSSVSEVLTRPLYRSSSL 327

Query: 487 GAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRK-SMLK-LAERMVISFCAGVSA 544
            A+R      R  + LA          E+G I    G++ S+L+ L+ RM   F   V+ 
Sbjct: 328 LAQRMTVKALRFLKHLAQ--------EEIGEIVVGGGQQPSVLRSLSRRMARGFNDAVNG 379

Query: 545 STAHTWTTLSGTGADDVRV---------MTRKSVDDPGRPPGIVLSAATSFWLPVPPKRV 595
                W T+ G G D+V V         +++   D      G++ + A+     V P  +
Sbjct: 380 FPDDGWCTMGGDGLDNVAVSCNATINFSLSKFQSDRLSSLAGVLCAKASMLLQNVHPSYL 439

Query: 596 FDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNC-------VSLLRVNCLQSANSSQ 648
             FLRD   RSEW   +     Q+ A  ++G+   +           L    L+   S++
Sbjct: 440 IRFLRDH--RSEWGC-NMDFFQQDAASRSHGKRQAHVPLFHTAKEDFLEAVILEGHYSAE 496

Query: 649 -----SNMLILQESCTD------PTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAI 697
                S  + L + C+          S +I+APVD             D + LL SGF +
Sbjct: 497 DGTILSREIYLLQLCSGIEDEDIDGCSQLIFAPVD---------ANLSDDMPLLSSGFRV 547

Query: 698 LP-------------DGTSLHGANIGEAASGGSLLTVAFQILVD 728
           LP             D   L            S+LT+AFQ + +
Sbjct: 548 LPLCDDMDDIVKRQSDSEELRSGKRKNHKFARSILTIAFQFMYE 591



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 7/82 (8%)

Query: 91  KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQVKFWFQNKRTQMK 146
           + +Y R+T  Q++ +E  + ECP P   +R++L +E      + P Q+K WFQN+R + K
Sbjct: 4   QNKYARYTNEQLEILELVYNECPKPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREK 63

Query: 147 TQHERHENTQLRTENEKLRADN 168
              +R E ++L   N KL A N
Sbjct: 64  ---QRKETSRLHGLNSKLTALN 82


>gi|397488573|ref|XP_003815333.1| PREDICTED: short stature homeobox protein-like [Pan paniscus]
          Length = 218

 Score = 62.4 bits (150), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 10/148 (6%)

Query: 24  GLGSSSGLTLSQPT--NMMEGQLH-PLDMTQNTSESEIARLREEEFDSTKSG----SENH 76
           GL  S  L  S  +  ++ EG  H P+ + ++  +++  +L+E        G     E  
Sbjct: 42  GLARSRELGTSDSSLQDITEGGGHCPVHLFKDHVDNDKEKLKEFGTARVAEGIYECKEKR 101

Query: 77  EGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 134
           E    +D++ +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL   +V
Sbjct: 102 EDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARV 161

Query: 135 KFWFQNKRTQMKTQ-HERHENTQLRTEN 161
           + WFQN+R + + Q ++ H+   L T N
Sbjct: 162 QVWFQNRRAKCRKQENQMHKGVILGTAN 189


>gi|224165518|ref|XP_002338824.1| predicted protein [Populus trichocarpa]
 gi|222873518|gb|EEF10649.1| predicted protein [Populus trichocarpa]
          Length = 142

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 18  KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 75

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L+  N KL A N
Sbjct: 76  -QRKEASRLQAVNRKLTAMN 94


>gi|325651485|dbj|BAJ83628.1| class III HD-Zip protein [Cabomba caroliniana]
          Length = 703

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 122/297 (41%), Gaps = 46/297 (15%)

Query: 336 ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 395
           A+R   +V +    + EIL D   W            +L+VL+   +GN  G ++++  +
Sbjct: 149 AARACGLVSLEPSKVAEILKDRMSW-------YRDCRSLDVLTVLPSGN-GGTIELIYMQ 200

Query: 396 FQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VRCRRRPSGCL 448
              P+ L   R+ + +RY     +G+  V   SL      P+       VR    PSGCL
Sbjct: 201 TYAPTTLASARDFWTLRYTIGMEDGSLVVCQRSLTASTGGPSGSTTPNFVRAEMLPSGCL 260

Query: 449 IQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMAT 508
           I+    G S V  V+H+++D   V  + + L  +      K  +  L R   ++A     
Sbjct: 261 IRPCEVGGSTVHIVDHIDLDAWSVPEVLRPLYESSKILAQKMTLVAL-RHIRQVA----- 314

Query: 509 NIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTR 566
           +  + E G  T   GR+   +   ++R+   F   V+  +   W+ ++  G +DV +   
Sbjct: 315 HETSDEAGYST---GRQPAVLRTFSQRLSRGFNDAVNCFSEDGWSLMNSDGVEDVTIAVN 371

Query: 567 KSVDDPGR--------------PPGIVLSAATSFWLP-VPPKRVFDFLRDENTRSEW 608
            S   P +                G VL A  S  L  VPP  +  FLR+   RSEW
Sbjct: 372 AS---PSKNLVGHFSSTMPLLVSGGGVLCAKASMLLQNVPPAILVRFLREH--RSEW 423


>gi|414871782|tpg|DAA50339.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 174

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 29  KYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L+T N KL A N
Sbjct: 87  -QRKEASRLQTVNRKLTAMN 105


>gi|357448585|ref|XP_003594568.1| Homeobox-leucine zipper protein ROC3 [Medicago truncatula]
 gi|355483616|gb|AES64819.1| Homeobox-leucine zipper protein ROC3 [Medicago truncatula]
          Length = 160

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 9/121 (7%)

Query: 94  YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 153
           + RH+  Q   +E  F+   +P +KQ+ E++ ELGL+P QV +WF  KR  +K   ++  
Sbjct: 22  FPRHSPAQRLRLEEIFQTIKYPTNKQKSEIAEELGLQPKQVNWWFTYKRGLVKNATQKEV 81

Query: 154 NTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRI 213
           N   R E + L  +  R  E  +  SC  C               LRLEN  L+E+  ++
Sbjct: 82  NAAFRAEIQML-LEEKREMERQNRVSCQACRDSRL--------KQLRLENELLKEKPSKL 132

Query: 214 S 214
           +
Sbjct: 133 N 133


>gi|242085052|ref|XP_002442951.1| hypothetical protein SORBIDRAFT_08g005375 [Sorghum bicolor]
 gi|241943644|gb|EES16789.1| hypothetical protein SORBIDRAFT_08g005375 [Sorghum bicolor]
          Length = 40

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/38 (63%), Positives = 32/38 (84%)

Query: 409 YYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSG 446
           ++VRYCKQ+ +GTWAVVD+SLD+L PS  ++C RR SG
Sbjct: 3   HFVRYCKQNADGTWAVVDISLDSLHPSSVLKCWRRLSG 40


>gi|110349550|gb|ABG73250.1| class III HD-Zip protein HDZ31 [Ginkgo biloba]
          Length = 394

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 94/443 (21%), Positives = 164/443 (37%), Gaps = 86/443 (19%)

Query: 137 WFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDE 196
           WFQN+R + K   +R E ++L+T N KL A N    E                  +    
Sbjct: 1   WFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQV 43

Query: 197 HHLRLENARLREEIDRISAIAAKYVGKPVVNY-PLLSPPVPSRPLELAVGNFGAQPGIGG 255
             L  EN  +R+++   S        + VV        P P  P                
Sbjct: 44  SQLVYENGYMRQQLQNASVATTDTSCESVVTSGQHQHNPTPQHP---------------- 87

Query: 256 GEMYGAADLLRSISAPTEADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNED 315
                          P +A    ++ +A   + E +  A            GTA    + 
Sbjct: 88  ---------------PRDASPAGLLSIAEETLAEFLSKA-----------TGTAVDWVQM 121

Query: 316 EYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMT 373
             ++  P  IG       C   A+R   +V +    + EIL D   W       +     
Sbjct: 122 PGMKPGPDSIGIVAISHSCSGVAARACGLVGLEPTKIAEILKDRPSW-------LRDCRC 174

Query: 374 LEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLR 433
           L+VL+    GN  G ++++  +   P+ L   R+ + +RY     +G+  V + SL   +
Sbjct: 175 LDVLTPFPTGN-GGTIELLYMQTYAPTTLASARDFWTLRYTTVLEDGSLVVCERSLSGAQ 233

Query: 434 PSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAF 486
             P+       VR    PSG LI+    G S +  V+H++++   V  + + L  +    
Sbjct: 234 GGPSIAPAQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 293

Query: 487 GAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSAS 545
             K  +A L R+  ++A  +     TGE  V+     + ++L+  ++R+   F   V+  
Sbjct: 294 AQKMTIAAL-RRIRQIAQEV-----TGE--VVFGWGRQPAVLRTFSQRLSRGFNEAVNGF 345

Query: 546 TAHTWTTLSGTGADDVRVMTRKS 568
           T   W+ +   G +DV +    S
Sbjct: 346 TDDGWSLMGNDGMEDVTIAINSS 368


>gi|147898431|ref|NP_001079055.1| paired-like homeodomain 2 [Xenopus laevis]
 gi|3955071|emb|CAA06697.1| XPtx2b [Xenopus laevis]
          Length = 316

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 12/132 (9%)

Query: 33  LSQPTNMMEGQLHPLDMTQ-NTSES--EIARLREEEFDSTKSGSENHEGASGDDQEQRPN 89
            S+ ++M +G     D T+ N  E+    +R+ +   D  KS    +E  S DD    P+
Sbjct: 26  FSKESDMKKGGFSAADGTEGNRKETGKRFSRIHQSGSDKDKSHQSKNEDNSTDD----PS 81

Query: 90  KKKRYHRHTQH----QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           KKKR  R   H    Q+QE+EA F+   +PD   R+E++    L   +V+ WF+N+R + 
Sbjct: 82  KKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKW 141

Query: 146 KTQHERHENTQL 157
           + + ER++ T+L
Sbjct: 142 R-KRERNQQTEL 152


>gi|357448591|ref|XP_003594571.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355483619|gb|AES64822.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 241

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 29/150 (19%)

Query: 576 PGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNCVSL 635
           P IV+  A+S  +P+P   VFDFLR  +   +WD   +G    E+  ++  +D       
Sbjct: 120 PFIVI-VASSVSIPLPSHIVFDFLR--SILQDWDKFCDGNPWHEIPLVSPPKD------- 169

Query: 636 LRVNCLQSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVAL-LPSG 694
                          + I+QE   DP  S+V+Y+P++   +N+ +NG D   V+L +PSG
Sbjct: 170 --------------GVKIIQECFIDPLGSYVVYSPLNTQELNMAINGHDLSNVSLIIPSG 215

Query: 695 FAILPDGTSLHGANIGEAASGGSLLTVAFQ 724
           F I    +    +   ++ S GSLLTVAF 
Sbjct: 216 FLI----SEDSKSLSKDSKSRGSLLTVAFH 241


>gi|209171581|gb|ACI42911.1| tendril-less [Pisum sativum]
 gi|209171583|gb|ACI42912.1| tendril-less [Pisum sativum]
          Length = 237

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 49/82 (59%)

Query: 98  TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           T +Q+  +E  F E    D +++ +LS ELGL+P QV  WFQN+RT+ KT+   H    L
Sbjct: 78  TSNQVDALERSFHEEIKLDPERKMKLSAELGLQPRQVAVWFQNRRTRWKTKQLEHSYDVL 137

Query: 158 RTENEKLRADNMRYREALSNAS 179
           + EN+KL+ + M  +E L   S
Sbjct: 138 KQENQKLQEEVMVLKEKLKEKS 159


>gi|37147908|gb|AAQ88401.1| HD-ZIP [Capsicum annuum]
          Length = 220

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 16/95 (16%)

Query: 86  QRPNKKK--RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRT 143
           +RP KKK     R T  Q++ +E+ FK     + +++ +L+R+LGL+P QV  WFQNKR 
Sbjct: 14  KRPLKKKCENAKRFTDEQVKLLESMFKLGTKIEPREKLQLARDLGLQPRQVAIWFQNKRA 73

Query: 144 QMKTQHERHE-----------NTQ---LRTENEKL 164
           + K++   HE           NTQ   L+ E E+L
Sbjct: 74  RWKSKQLEHEYRILQSKFDHLNTQFESLKIEKERL 108


>gi|357448489|ref|XP_003594520.1| Homeobox-leucine zipper protein ATHB-14 [Medicago truncatula]
 gi|355483568|gb|AES64771.1| Homeobox-leucine zipper protein ATHB-14 [Medicago truncatula]
          Length = 823

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 116/297 (39%), Gaps = 39/297 (13%)

Query: 336 ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGN----YNGALQV 391
           A+R   +V +    + EIL D   W      +      L ++ TG  G     Y   L  
Sbjct: 184 AARACGLVSLEPTKVAEILKDRLSWYRDCRCV----DVLSIVPTGGGGTIELMYMQVLFY 239

Query: 392 MTAEFQVPSP-LVPTRESYYVRYCKQHGEGTWAVVDVSLDN-----LRPSPA--VRCRRR 443
            T E  +P   L+ +R+ + +RY     +G+  + + SL+        PSP+  VR    
Sbjct: 240 STKELTMPFLFLLTSRDFWTLRYTTSLEDGSLVICERSLNASTGGPTGPSPSNFVRAEML 299

Query: 444 PSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLA 503
           PSG LI+    G S +  V+HV++D   V  + + L  +      K  +A L        
Sbjct: 300 PSGFLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKLTIAALQH------ 353

Query: 504 SVMATNIPTGEVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV 561
                 I     G I    GR+   +   ++R+   F   V+      W+ L   G +DV
Sbjct: 354 ---IKQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLLGNDGVEDV 410

Query: 562 RVMTRKSVDD----------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEW 608
            +    S +           P    G++ + A+     VPP  +  FLR+   RSEW
Sbjct: 411 TIAVNSSPNKFLGSNYSSMFPTFGGGVLCAKASMLLQNVPPALLVRFLREH--RSEW 465



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 4/53 (7%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNK 141
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+
Sbjct: 13  KYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 65


>gi|119331578|gb|ABL63115.1| DNA-binding protein [Catharanthus roseus]
          Length = 282

 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 11/117 (9%)

Query: 54  SESEIARLREEEF---DSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFK 110
           +E E +R RE+ F   +   SG+EN +G         P KK+R    T  Q+Q +E  F+
Sbjct: 7   AEGENSRKREKSFFPQEEENSGNENFDGYF-----HHPEKKRRL---TADQVQFLEKSFE 58

Query: 111 ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRAD 167
                + +++ +L++ELGL+P QV  WFQN+R + KT+    E   L++  +KL AD
Sbjct: 59  VENKLEPERKVQLAKELGLQPRQVAIWFQNRRARYKTKQLEKEYDSLKSSFDKLNAD 115


>gi|443894059|dbj|GAC71409.1| hypothetical protein PANT_3c00014 [Pseudozyma antarctica T-34]
          Length = 863

 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 62/108 (57%), Gaps = 7/108 (6%)

Query: 87  RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           RP  +K+ ++ T  Q++ +EAFF++  +P  + R ELSR+L +    V+ WFQN+R ++K
Sbjct: 266 RPRGRKKRNKCTPEQLRSLEAFFEKNRNPTGRIRLELSRKLRMPERSVQVWFQNRRAKVK 325

Query: 147 TQHERHE--NTQLRTENEKLRADNMR-YR----EALSNASCPNCGGPT 187
           T   R +  +   R ++  LRAD+   YR      +S+ +  + G PT
Sbjct: 326 TIERRGDGGSDSGRKKSYSLRADDKSAYRGGGGGGMSSRTSRDAGDPT 373


>gi|75315198|sp|Q9XH36.1|HOX5_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX5; AltName:
           Full=HD-ZIP protein HOX5; AltName: Full=Homeodomain
           transcription factor HOX5; AltName: Full=OsHox5
 gi|5006855|gb|AAD37698.1|AF145729_1 homeodomain leucine zipper protein [Oryza sativa Indica Group]
 gi|125561547|gb|EAZ06995.1| hypothetical protein OsI_29241 [Oryza sativa Indica Group]
          Length = 350

 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 3/83 (3%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           Q P KK+R    T  Q+Q +E  F+E    + +++ EL+R LG+ P QV  WFQN+R + 
Sbjct: 82  QAPEKKRRL---TAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARW 138

Query: 146 KTQHERHENTQLRTENEKLRADN 168
           KT+   H+  +L+   + L AD+
Sbjct: 139 KTKQLEHDFDRLKAAYDALAADH 161


>gi|115476422|ref|NP_001061807.1| Os08g0416000 [Oryza sativa Japonica Group]
 gi|75134805|sp|Q6ZA74.1|HOX5_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX5; AltName:
           Full=HD-ZIP protein HOX5; AltName: Full=Homeodomain
           transcription factor HOX5; AltName: Full=OsHox5
 gi|37573050|dbj|BAC98578.1| homeodomain leucine zipper protein [Oryza sativa Japonica Group]
 gi|113623776|dbj|BAF23721.1| Os08g0416000 [Oryza sativa Japonica Group]
 gi|125603415|gb|EAZ42740.1| hypothetical protein OsJ_27319 [Oryza sativa Japonica Group]
          Length = 349

 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 3/83 (3%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           Q P KK+R    T  Q+Q +E  F+E    + +++ EL+R LG+ P QV  WFQN+R + 
Sbjct: 82  QAPEKKRRL---TAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARW 138

Query: 146 KTQHERHENTQLRTENEKLRADN 168
           KT+   H+  +L+   + L AD+
Sbjct: 139 KTKQLEHDFDRLKAAYDALAADH 161


>gi|209171585|gb|ACI42913.1| tendril-less [Lathyrus odoratus]
          Length = 237

 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 49/82 (59%)

Query: 98  TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           T +Q+  +E  F E    + +++ +LS ELGL+P QV  WFQN+RT+ KT+   H    L
Sbjct: 78  TSNQVDALERSFHEEIKLEPERKMKLSAELGLQPRQVAVWFQNRRTRWKTKQLEHSYDVL 137

Query: 158 RTENEKLRADNMRYREALSNAS 179
           + EN+KL+ + M  +E L   S
Sbjct: 138 KQENQKLQEEVMELKEKLKEKS 159


>gi|449447319|ref|XP_004141416.1| PREDICTED: homeobox-leucine zipper protein HAT22-like [Cucumis
           sativus]
          Length = 261

 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 3/94 (3%)

Query: 82  DDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 141
           +D+E  P KK R    T+HQ   +E  FKE      KQ+++L+R+L L P QV+ WFQN+
Sbjct: 102 EDEEGSPRKKLRL---TKHQSAILEDNFKEHSSLSPKQKQDLARQLNLRPRQVEVWFQNR 158

Query: 142 RTQMKTQHERHENTQLRTENEKLRADNMRYREAL 175
           R + K +    +   L+   EKL+ +N R ++ L
Sbjct: 159 RARTKLKQTEMDCELLKKCCEKLKEENTRLQKEL 192


>gi|302398835|gb|ADL36712.1| HD domain class transcription factor [Malus x domestica]
          Length = 231

 Score = 59.3 bits (142), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/80 (33%), Positives = 48/80 (60%)

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           +++ NK K   R +  QI  +E+ F+     + +++ +L+RELGL+P QV  WFQN+R +
Sbjct: 25  KRKKNKSKNTRRFSDEQISLLESIFEADSKLEPRRKVQLARELGLQPRQVAIWFQNRRAR 84

Query: 145 MKTQHERHENTQLRTENEKL 164
            K++    +   LR + +KL
Sbjct: 85  WKSKQIEQDLRSLREDYDKL 104


>gi|212723150|ref|NP_001131291.1| uncharacterized protein LOC100192604 [Zea mays]
 gi|194691096|gb|ACF79632.1| unknown [Zea mays]
          Length = 146

 Score = 59.3 bits (142), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/49 (55%), Positives = 36/49 (73%), Gaps = 2/49 (4%)

Query: 411 VRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKV 459
           VRY KQ+ + TW   DVSL++L P   + C+R+ SGCLIQ+ PNGYSK+
Sbjct: 7   VRYYKQNADETW--FDVSLNSLLPGSVLNCQRQVSGCLIQKKPNGYSKI 53


>gi|355570187|gb|EHH25603.1| hypothetical protein EGK_21477, partial [Macaca mulatta]
          Length = 120

 Score = 59.3 bits (142), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 3/91 (3%)

Query: 74  ENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
           E  E    +D++ +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL  
Sbjct: 7   EKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 66

Query: 132 LQVKFWFQNKRTQMKTQ-HERHENTQLRTEN 161
            +V+ WFQN+R + + Q ++ H+   L T N
Sbjct: 67  ARVQVWFQNRRAKCRKQENQMHKGVILGTAN 97


>gi|75114385|sp|Q651Z5.1|HOX6_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX6; AltName:
           Full=HD-ZIP protein HOX6; AltName: Full=Homeodomain
           transcription factor HOX6; AltName: Full=OsHox6
 gi|187609458|sp|Q9XH35.2|HOX6_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX6; AltName:
           Full=HD-ZIP protein HOX6; AltName: Full=Homeodomain
           transcription factor HOX6; AltName: Full=OsHox6
 gi|52077331|dbj|BAD46372.1| putative homeodomain leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|215736997|dbj|BAG95926.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215765407|dbj|BAG87104.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 249

 Score = 59.3 bits (142), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 3/76 (3%)

Query: 89  NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           ++KKR+   ++ QI+ +E+ F      + +Q+ +L+RELGL+P QV  WFQNKR + K++
Sbjct: 29  DRKKRF---SEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 85

Query: 149 HERHENTQLRTENEKL 164
               E + LR + + L
Sbjct: 86  QLEREYSALRDDYDAL 101


>gi|115480285|ref|NP_001063736.1| Os09g0528200 [Oryza sativa Japonica Group]
 gi|5006857|gb|AAD37699.1|AF145730_1 homeodomain leucine zipper protein, partial [Oryza sativa Indica
           Group]
 gi|113631969|dbj|BAF25650.1| Os09g0528200, partial [Oryza sativa Japonica Group]
          Length = 212

 Score = 59.3 bits (142), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 3/76 (3%)

Query: 89  NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           ++KKR+   ++ QI+ +E+ F      + +Q+ +L+RELGL+P QV  WFQNKR + K++
Sbjct: 51  DRKKRF---SEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 107

Query: 149 HERHENTQLRTENEKL 164
               E + LR + + L
Sbjct: 108 QLEREYSALRDDYDAL 123


>gi|222625450|gb|EEE59582.1| hypothetical protein OsJ_11886 [Oryza sativa Japonica Group]
          Length = 152

 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 32  KYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 89

Query: 149 HERHENTQLRTENEKLRADN 168
            +R E ++L+T N KL A N
Sbjct: 90  -QRKEASRLQTVNRKLTAMN 108


>gi|356571260|ref|XP_003553797.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           ATHB-7-like [Glycine max]
          Length = 209

 Score = 58.9 bits (141), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 88  PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
           P+K KR  R    QI+ +E+ F+     +  ++ +L+RELGL+P QV  WFQNKR + K+
Sbjct: 2   PSKNKR--RLNDEQIKSLESIFEADARLEPTKKLQLARELGLQPRQVAIWFQNKRARWKS 59

Query: 148 QHERHENTQLRTENEKLRADNMRYR 172
           +  + + T LR     L A N  ++
Sbjct: 60  KRLQRDYTILRASYNNLXALNKEHQ 84


>gi|115448457|ref|NP_001048008.1| Os02g0729700 [Oryza sativa Japonica Group]
 gi|75132062|sp|Q6YWR4.1|HOX16_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX16; AltName:
           Full=HD-ZIP protein HOX16; AltName: Full=Homeodomain
           transcription factor HOX16; AltName: Full=OsHox16
 gi|46390454|dbj|BAD15915.1| putative homeodomain leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|46390850|dbj|BAD16354.1| putative homeodomain leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|113537539|dbj|BAF09922.1| Os02g0729700 [Oryza sativa Japonica Group]
 gi|125583560|gb|EAZ24491.1| hypothetical protein OsJ_08251 [Oryza sativa Japonica Group]
 gi|215767479|dbj|BAG99707.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 343

 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           Q P KK+R    T  Q+  +E  F+E    + +++ EL+R+LGL+P QV  WFQN+R + 
Sbjct: 73  QLPEKKRRL---TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARW 129

Query: 146 KTQHERHENTQLRTENEKLRADN 168
           KT+    +  +L+   + LRAD+
Sbjct: 130 KTKQLERDFDRLKASFDALRADH 152


>gi|187471148|sp|A2X980.1|HOX16_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX16; AltName:
           Full=HD-ZIP protein HOX16; AltName: Full=Homeodomain
           transcription factor HOX16; AltName: Full=OsHox16
 gi|125540995|gb|EAY87390.1| hypothetical protein OsI_08797 [Oryza sativa Indica Group]
          Length = 345

 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           Q P KK+R    T  Q+  +E  F+E    + +++ EL+R+LGL+P QV  WFQN+R + 
Sbjct: 75  QLPEKKRRL---TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARW 131

Query: 146 KTQHERHENTQLRTENEKLRADN 168
           KT+    +  +L+   + LRAD+
Sbjct: 132 KTKQLERDFDRLKASFDALRADH 154


>gi|414868943|tpg|DAA47500.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 673

 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 115/506 (22%), Positives = 191/506 (37%), Gaps = 113/506 (22%)

Query: 302 MTSLDGTAAVLNEDEYVRTFPRGIGPKPTGFKCE--ASRETAVVIMNHISLVEILMDVNQ 359
           M+   GTA    +   ++  P  +G       C   A+R   +V +    + EIL D   
Sbjct: 1   MSKATGTAVNWVQMVGMKPGPDSVGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRAS 60

Query: 360 WSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHGE 419
           W         R   L V+ TG      G ++++  +    + L   R+ + +RY     +
Sbjct: 61  WYR----DCRRVDILHVIPTG----NGGTIELIYMQTYALTTLAEPRDFWTLRYTSGLDD 112

Query: 420 GTWAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGV 472
           G+  + + SL +    P+       +R    PSG LI+    G S +  V+HV+++   V
Sbjct: 113 GSLVICERSLTHSTGGPSGPKTPDFIRAEVLPSGYLIRPCDGGGSMIYIVDHVDLNACSV 172

Query: 473 HNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGEVGVITNQDGRKSML--KL 530
             + + L  +      K   A L R   ++A   +   P G         GR+  +    
Sbjct: 173 PEVLRPLYESPKILAQKMTAAAL-RHIRQIAHESSGETPYGA--------GRQPAVLRTF 223

Query: 531 AERMVISFCAGVSASTAHTWTT-LSGTGADDVRVMTRKSVD-----DPGRPP-------G 577
           ++R+   F   VS      W++ LS  GA+D+ +    S +     D    P       G
Sbjct: 224 SQRLSRGFNDAVSGFPDDGWSSLLSSDGAEDISITINSSPNKLIGSDVSPSPFFSAMGGG 283

Query: 578 IVLSAATSFWLPVPPKRVFDFLRDENTRSEWDI--------------------LSNGGVV 617
           I+ + A+     VPP  +  FLR+   RSEW                      L  GG +
Sbjct: 284 IMCAKASMLLQNVPPALLVRFLREH--RSEWADPGVDAYSAASLRANPYNVPGLRAGGFM 341

Query: 618 --QEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNMLI-----LQESCTD-----PTA-S 664
             Q +  +A   +   C+ ++R   LQ    S   +L+     L + C+      P A +
Sbjct: 342 GNQVILPLARTVEHEECLEVIR---LQGHGFSHDEVLMSPDMFLLQLCSGIDEDAPGACA 398

Query: 665 FVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGT---------SLHGANIGEAASG 715
            +++AP+D             D   LLPSGF ++P            +L  A+  E  SG
Sbjct: 399 QLVFAPID---------ESFADDAPLLPSGFRVIPLDAKTDVPSATRTLDLASALEVGSG 449

Query: 716 G----------------SLLTVAFQI 725
           G                S+LT+AFQ 
Sbjct: 450 GGLCALSDSGSGTRSTRSVLTIAFQF 475


>gi|414880625|tpg|DAA57756.1| TPA: hypothetical protein ZEAMMB73_026223 [Zea mays]
          Length = 79

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 36/49 (73%), Gaps = 2/49 (4%)

Query: 411 VRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEMPNGYSKV 459
           VRY KQ+ + TW   DVSL++L P   + C+R+ SGCLIQ+ PNGYSK+
Sbjct: 7   VRYYKQNADETW--FDVSLNSLLPGSVLNCQRQVSGCLIQKKPNGYSKI 53


>gi|119331074|ref|NP_001073192.1| short stature homeobox protein [Gallus gallus]
 gi|110559938|gb|ABG76207.1| Shox [Gallus gallus]
          Length = 291

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 7/118 (5%)

Query: 38  NMMEGQLH-PLDMTQNTSESEIARLREEEFDSTKSG----SENHEGASGDDQEQRPNKKK 92
           +M EG  H P+ + ++  ES+  +L+E     T  G     E  E    +D++ +   K+
Sbjct: 57  DMTEGSNHCPVHLFKDHVESDKDKLKEFAAGRTAEGIYECKEKREDVKSEDEDGQTKLKQ 116

Query: 93  RYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL   +V+ WFQN+R + + Q
Sbjct: 117 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 174


>gi|357143608|ref|XP_003572981.1| PREDICTED: homeobox-leucine zipper protein HOX16-like [Brachypodium
           distachyon]
          Length = 340

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 3/84 (3%)

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           EQ P KK+R    T  Q+  +E  F+E    + +++ EL+R+LGL+P QV  WFQN+R +
Sbjct: 75  EQLPEKKRRL---TPEQVHLLEKSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRAR 131

Query: 145 MKTQHERHENTQLRTENEKLRADN 168
            KT+    +  +L+   + LRAD+
Sbjct: 132 WKTKTLERDFDRLKASFDALRADH 155


>gi|268416836|gb|ACZ05048.1| putative homeobox protein 12 [Phytolacca acinosa]
          Length = 241

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 3/88 (3%)

Query: 77  EGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKF 136
           E  SG   +++   KKR+   +  Q++ +E+ F+     + K++ +++RELGL+P QV  
Sbjct: 13  EVGSGSSMKRKMMNKKRF---SDEQVKSLESIFENETKLEPKKKVQVARELGLQPRQVAI 69

Query: 137 WFQNKRTQMKTQHERHENTQLRTENEKL 164
           WFQNKR + K++    + + LRT    L
Sbjct: 70  WFQNKRARFKSKQLERDYSLLRTSYNSL 97


>gi|357440243|ref|XP_003590399.1| Homeobox-leucine zipper protein ATHB-22 [Medicago truncatula]
 gi|355479447|gb|AES60650.1| Homeobox-leucine zipper protein ATHB-22 [Medicago truncatula]
          Length = 232

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 12/117 (10%)

Query: 89  NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           N++K+  R T  Q++ +E+ F+E    D +++ +LS+ELGL+P Q+  WFQN+R + KT+
Sbjct: 56  NQEKK-KRLTSEQMESLESSFQEEIKLDPQRKMKLSKELGLQPRQIAIWFQNRRARWKTK 114

Query: 149 HERHENTQLR-------TENEKLRADNMRYREALSNA--SCPNCGGPTAIGEMSFDE 196
              H    LR        E ++L+ + M+ +  L     SC    G     EMS +E
Sbjct: 115 QLEHLYDSLRHQFEVVSKEKQQLQDEVMKLKAMLKEQGNSCGRMQGYYT--EMSVEE 169


>gi|125596435|gb|EAZ36215.1| hypothetical protein OsJ_20534 [Oryza sativa Japonica Group]
          Length = 83

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 39/46 (84%)

Query: 717 SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCES 762
           S++TVAFQILV S+P++KL+  SVATVN LI  TVE+IKA+L+C +
Sbjct: 33  SVVTVAFQILVSSLPSSKLNAESVATVNGLITTTVEQIKAALNCSA 78


>gi|340724544|ref|XP_003400641.1| PREDICTED: LOW QUALITY PROTEIN: segmentation protein paired-like
           [Bombus terrestris]
          Length = 502

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 10/110 (9%)

Query: 48  DMTQNTSESEIARL---REEEFDSTKSGSENHEGASGDDQEQRP----NKKKRYHR--HT 98
           D T   S S I+RL   R+ E D TK G  + + +SG D E  P     +K+R  R   T
Sbjct: 141 DRTSAPSVSAISRLLRGRDPE-DETKLGDRDGKTSSGSDCESEPGIPLKRKQRRSRTTFT 199

Query: 99  QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
            HQ+ E+E  F+   +PD   R+EL++   L   +++ WF N+R +++ Q
Sbjct: 200 AHQLDELERAFERTQYPDIYTREELAQRTKLTEARIQVWFSNRRARLRKQ 249


>gi|209171589|gb|ACI42915.1| tendril-less [Vicia narbonensis]
          Length = 237

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)

Query: 98  TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           T +Q+  +E  F E    D +++ +LS ELGL+P QV  WFQN+RT+ KT+        L
Sbjct: 78  TSNQVDALERSFHEEIKLDPERKMKLSAELGLQPRQVAVWFQNRRTRWKTKQLEQSYDVL 137

Query: 158 RTENEKLRADNMRYREALS-NASC 180
           + EN+KL+ + M  +E L   A C
Sbjct: 138 KQENQKLQDEVMELKEKLKEKADC 161


>gi|328717525|ref|XP_001950483.2| PREDICTED: retinal homeobox protein Rx2-like [Acyrthosiphon pisum]
          Length = 300

 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 3/103 (2%)

Query: 51  QNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAF 108
           Q TSE    +L+ E   S  S S +H G +          ++R HR   TQ Q+ E+EA 
Sbjct: 81  QTTSEGAFKKLKTEPLTSVGSISASHSGHTPTTATCPTPARRR-HRTTFTQEQLAELEAA 139

Query: 109 FKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
           F +  +PD   R+EL+R   L   +++ WFQN+R + + Q ++
Sbjct: 140 FAKSHYPDIYCREELARSTKLNEARIQVWFQNRRAKYRKQEKQ 182


>gi|113205186|gb|AAT39931.2| Homeobox-leucine zipper protein HAT7 , putative [Solanum demissum]
          Length = 173

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 18/116 (15%)

Query: 67  DSTKSGSENH-EGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
           D   +  ENH E    DD  Q   KK+R +     Q++ +E  F+     + +++ +L+R
Sbjct: 55  DGNNACEENHGEDDLSDDGSQAGEKKRRLN---MEQVKTLEKNFELGNKLEPERKMQLAR 111

Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHE--------------RHENTQLRTENEKLRAD 167
            LGL+P Q+  WFQN+R + KT+                + EN  L+T+N+KL A+
Sbjct: 112 ALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKRQFDAIKAENDALQTQNQKLHAE 167


>gi|340386324|ref|XP_003391658.1| PREDICTED: aristaless-related homeobox protein-like, partial
           [Amphimedon queenslandica]
          Length = 195

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 9/148 (6%)

Query: 52  NTSESEIARLREEEFDSTKSGSENH-------EGASGDDQEQRPNKKKRYHR-HTQHQIQ 103
           ++S   +A   E   +S   G E++       +  S  D++  P K KR    ++  Q+ 
Sbjct: 5   DSSRPPMAIKEESYIESDDRGEEDYGPSDEESDSNSTTDKDAEPKKPKRTRTAYSNSQLD 64

Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEK 163
           ++E  F    +PD   R++LSR LG+   +++ WFQN+R + + Q ER  +   R+   +
Sbjct: 65  QLELIFATTHYPDVFTREDLSRRLGIREDRIQVWFQNRRARFRKQ-ERTGSISCRSRYRQ 123

Query: 164 LRADNMRYREALSNASCPNCGGPTAIGE 191
            R + +++    S+A  P    P ++ +
Sbjct: 124 KRLEKLQHNFMPSSAGYPPTHYPPSVSQ 151


>gi|168066643|ref|XP_001785244.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663175|gb|EDQ49955.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 174

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 15/134 (11%)

Query: 66  FDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
           F +   G  +      DD ++  ++K R+   T+ Q++ +E  F+    P+  Q+  L+ 
Sbjct: 33  FRAVFPGGSSDASTEYDDDDEGASQKLRF---TKAQLRHLEDTFERLQRPNAHQKATLAM 89

Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGG 185
           ELG++P QV+ WFQN+R + K +    +   LR   + L  +N +    + +        
Sbjct: 90  ELGVQPRQVEVWFQNRRARGKAKRTETDCEVLRQRCQDLIVENHQLNYLIQSE------- 142

Query: 186 PTAIGEMSFDEHHL 199
                 M +D HHL
Sbjct: 143 -----RMGYDSHHL 151


>gi|293336846|ref|NP_001169496.1| uncharacterized protein LOC100383369 [Zea mays]
 gi|224029677|gb|ACN33914.1| unknown [Zea mays]
          Length = 339

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           Q P KK+R    T  Q+  +E  F+E    + +++ EL+R+LGL+P QV  WFQN+R + 
Sbjct: 70  QLPEKKRRL---TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARW 126

Query: 146 KTQHERHENTQLRTENEKLRADN 168
           KT+    +  +L+   + LRAD+
Sbjct: 127 KTKQLERDFDRLKASFDALRADH 149


>gi|413923850|gb|AFW63782.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 339

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           Q P KK+R    T  Q+  +E  F+E    + +++ EL+R+LGL+P QV  WFQN+R + 
Sbjct: 70  QLPEKKRRL---TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARW 126

Query: 146 KTQHERHENTQLRTENEKLRADN 168
           KT+    +  +L+   + LRAD+
Sbjct: 127 KTKQLERDFDRLKASFDALRADH 149


>gi|225455262|ref|XP_002271523.1| PREDICTED: homeobox-leucine zipper protein ATHB-12 [Vitis vinifera]
 gi|302143960|emb|CBI23065.3| unnamed protein product [Vitis vinifera]
          Length = 225

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/75 (33%), Positives = 44/75 (58%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           K +   R +  Q+Q +E+ F+     + ++++EL+ ELG++P QV  WFQNKR + K++ 
Sbjct: 22  KSRNKKRFSDEQVQYLESIFESDSKLEARKKEELAVELGMQPRQVAIWFQNKRARWKSKQ 81

Query: 150 ERHENTQLRTENEKL 164
             H+   LR   + L
Sbjct: 82  IEHDYKALRASYDAL 96


>gi|332226021|ref|XP_003262187.1| PREDICTED: homeobox protein ESX1 [Nomascus leucogenys]
          Length = 412

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 1/91 (1%)

Query: 57  EIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR-HTQHQIQEMEAFFKECPHP 115
           E  + +EE   +T  G +  EG    ++ Q P +K+R     TQ Q+QE+E FF E  +P
Sbjct: 117 EPKQEQEEPPQATVEGPQPAEGPQTAEEPQPPERKRRRRTAFTQFQLQELENFFDEAQYP 176

Query: 116 DDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           D   R+ L+  L L   +V+ WFQN+R + K
Sbjct: 177 DLVARERLAARLNLTEDRVQVWFQNRRAKWK 207


>gi|140052423|gb|ABE80119.2| Homeodomain-related [Medicago truncatula]
          Length = 142

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 89  NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           N++K+  R T  Q++ +E+ F+E    D +++ +LS+ELGL+P Q+  WFQN+R + KT+
Sbjct: 56  NQEKK-KRLTSEQMESLESSFQEEIKLDPQRKMKLSKELGLQPRQIAIWFQNRRARWKTK 114

Query: 149 HERHENTQLRTENEKLRADNMRYRE 173
              H    LR + E +  +  + ++
Sbjct: 115 QLEHLYDSLRHQFEVVSKEKQQLQD 139


>gi|209171591|gb|ACI42916.1| tendril-less [Vicia sativa]
          Length = 237

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 48/78 (61%)

Query: 98  TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           T +Q+  +E  F E    D +++ +LS ELGL+P QV  WFQN+RT+ KT+    +   L
Sbjct: 78  TSNQVDALERSFHEEIKLDPERKMKLSAELGLQPRQVAVWFQNRRTRWKTKQLEQDYDVL 137

Query: 158 RTENEKLRADNMRYREAL 175
           + EN+KL+ + M  +E L
Sbjct: 138 KQENQKLQDEVMTLKEKL 155


>gi|326502292|dbj|BAJ95209.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326505580|dbj|BAJ95461.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 336

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 3/84 (3%)

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           EQ P KK+R    T  Q+  +E  F+E    + +++ EL+R+LGL+P QV  WFQN+R +
Sbjct: 67  EQLPEKKRRL---TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRAR 123

Query: 145 MKTQHERHENTQLRTENEKLRADN 168
            KT+    +  +L+   + LRAD+
Sbjct: 124 WKTKTLERDFDRLKASFDALRADH 147


>gi|302757763|ref|XP_002962305.1| hypothetical protein SELMODRAFT_77000 [Selaginella moellendorffii]
 gi|300170964|gb|EFJ37565.1| hypothetical protein SELMODRAFT_77000 [Selaginella moellendorffii]
          Length = 821

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 7/82 (8%)

Query: 91  KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQVKFWFQNKRTQMK 146
           + +Y R+T  Q++ +E  + ECP P   +R++L +E      + P Q+K WFQN+R + K
Sbjct: 4   QNKYARYTNEQLEILELVYNECPKPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREK 63

Query: 147 TQHERHENTQLRTENEKLRADN 168
              +R E ++L   N KL A N
Sbjct: 64  ---QRKETSRLHGLNSKLTALN 82



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 102/456 (22%), Positives = 176/456 (38%), Gaps = 86/456 (18%)

Query: 324 GIGPKPTGF-KCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVA 382
           GI  +  G    EA+R      ++   +VE+L D   W         R+  + + S+   
Sbjct: 205 GIAARALGLVALEATR------VSEWRIVEVLKDKTSWL----WDCRRSDVIHICSSE-- 252

Query: 383 GNYNGA-LQVMTAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDN---LRPSPA- 437
              NG+ +++M  +   P+ L P R+   +R      +G   V + S+ +   L   P+ 
Sbjct: 253 ---NGSTMEIMHTQLYAPTTLAPPRDFCTLRLTTSLEDGNLVVCERSISDAECLSYVPST 309

Query: 438 ---VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVAT 494
              VR     SG L++    G   V  ++H+++    V  +  + +   ++  A+R    
Sbjct: 310 QYFVRAEMLTSGYLVRPCEGGSCIVHIIDHLDLKPSSVSEVLTRPLYRSSSLLAQRMTVK 369

Query: 495 LDRQCERLASVMATNIPTGEVGVITNQDGRK-SMLK-LAERMVISFCAGVSASTAHTWTT 552
             R  + LA          E+G I    G++ S+L+ L+ RM   F   V+      W T
Sbjct: 370 ALRFLKHLAQ--------EEIGEIVVGGGQQPSVLRSLSRRMARGFNDAVNGFPDDGWCT 421

Query: 553 LSGTGADDVRV---------MTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDEN 603
           + G G D+V V         +++   D      G++ + A+     V P  +  FLRD  
Sbjct: 422 MGGDGLDNVAVSCNATINFSLSKFQSDRLSSLAGVLCAKASMLLQNVHPSYLIRFLRDH- 480

Query: 604 TRSEWDILSNGGVVQEMAHIANGRDTGNC-------VSLLRVNCLQSANSSQ-----SNM 651
            RSEW   +     Q+ A  ++G+   +           L    L+   S++     S  
Sbjct: 481 -RSEWGC-NMDFFQQDAASRSHGKRQAHVPLFHTAKEDFLEAVILEGHYSAEDGTILSRE 538

Query: 652 LILQESCTD------PTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP------ 699
           + L + C+          S +I+APVD             D + LL SGF +LP      
Sbjct: 539 IYLLQLCSGIEDEDIDGCSQLIFAPVD---------ANLSDDMPLLSSGFRVLPLCDDMD 589

Query: 700 -------DGTSLHGANIGEAASGGSLLTVAFQILVD 728
                  D   L            S+LT+AFQ + +
Sbjct: 590 DIVKRQSDSEELRSGKRKNHKFARSILTIAFQFMYE 625


>gi|83035139|ref|NP_001032670.1| reproductive homeobox 10 [Rattus norvegicus]
 gi|66932867|gb|AAY58268.1| reproductive homeobox on X chromosome 10 [Rattus norvegicus]
          Length = 201

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 56/107 (52%)

Query: 44  LHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQ 103
           LH L   ++ S         E    T++     E A+G    +  N++ ++H+ T  Q+ 
Sbjct: 46  LHELGQDEHLSFKYKQNYSYETRKETQARPSEPEKAAGTAACRSNNRQIKHHKFTYAQLC 105

Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           E+E  F+E  +PD  +RK L+  + ++  +VK WF+NKR + + +H+
Sbjct: 106 ELEKAFQETQYPDAHRRKALAALIHVDECKVKAWFKNKRAKYRKKHK 152


>gi|148234767|ref|NP_001081159.1| homeobox-containing protein [Xenopus laevis]
 gi|49119544|gb|AAH73088.1| Hbox10-A protein [Xenopus laevis]
          Length = 571

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 6/116 (5%)

Query: 60  RLREEEFDSTKSGSENHEGASGDDQEQR--PNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           RL    +D+   G        GD  E+   P +KK    ++  Q+QE+E  F E  +PD 
Sbjct: 147 RLPTFIYDTGHGGDRQRGKCPGDATEEPGPPCRKKSRTLYSMDQLQELEHMFAEDHYPDS 206

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYRE 173
           ++R+E++  +G+ P ++  WFQN+R + +    + E T L+   + L +  M + E
Sbjct: 207 EKRREIAEIIGVTPQRIMVWFQNRRAKWR----KVEKTSLKGPRKPLSSAGMSHPE 258


>gi|395840473|ref|XP_003793082.1| PREDICTED: short stature homeobox protein [Otolemur garnettii]
          Length = 289

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 13/136 (9%)

Query: 24  GLGSSSGLTLSQPT--NMMEGQLH-PLDMTQNTSESEIARLREEEFDSTKSG------SE 74
           GL  S  L  S+    ++ EG  H P+ + ++  +S+  +LRE  F S ++        E
Sbjct: 39  GLARSRELGNSESNLQDITEGSGHCPVHLFKDHVDSDKEKLRE--FGSARAAEGIYECKE 96

Query: 75  NHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPL 132
             E    +D++ +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL   
Sbjct: 97  KREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 156

Query: 133 QVKFWFQNKRTQMKTQ 148
           +V+ WFQN+R + + Q
Sbjct: 157 RVQVWFQNRRAKCRKQ 172


>gi|302398861|gb|ADL36725.1| HD domain class transcription factor [Malus x domestica]
          Length = 236

 Score = 57.8 bits (138), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 9/111 (8%)

Query: 58  IARLREEEFDSTKSGSENHEGASGDD----QEQRPNKKKRYHRHTQHQIQEMEAFFKECP 113
           + R +EE ++      EN +  SG +     +++ NK     R +  QI  +E+ F+   
Sbjct: 1   MERRKEECYEE-----ENLDYVSGPEPLFATKRKKNKGTNTRRFSDEQISLLESIFEADS 55

Query: 114 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
             + +++ +L+RELGL+P QV  WFQN+R + K++    +   LR + +KL
Sbjct: 56  KLEPRRKVQLARELGLQPRQVAIWFQNRRARWKSKQMERDLRSLREDYDKL 106


>gi|31566395|gb|AAH53599.1| ESX homeobox 1 [Homo sapiens]
 gi|54611484|gb|AAH42633.1| ESX homeobox 1 [Homo sapiens]
          Length = 406

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 1/91 (1%)

Query: 57  EIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR-HTQHQIQEMEAFFKECPHP 115
           E+ + +EE   +T  G +  EG    +  Q P +K+R     TQ Q+QE+E FF E  +P
Sbjct: 105 ELKQEQEEPPQTTVEGPQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYP 164

Query: 116 DDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           D   R+ L+  L L   +V+ WFQN+R + K
Sbjct: 165 DVVARERLAARLNLTEDRVQVWFQNRRAKWK 195


>gi|413923851|gb|AFW63783.1| putative homeobox DNA-binding and leucine zipper domain family
           protein isoform 1 [Zea mays]
 gi|413923852|gb|AFW63784.1| putative homeobox DNA-binding and leucine zipper domain family
           protein isoform 2 [Zea mays]
          Length = 299

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           Q P KK+R    T  Q+  +E  F+E    + +++ EL+R+LGL+P QV  WFQN+R + 
Sbjct: 30  QLPEKKRRL---TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARW 86

Query: 146 KTQHERHENTQLRTENEKLRADN 168
           KT+    +  +L+   + LRAD+
Sbjct: 87  KTKQLERDFDRLKASFDALRADH 109


>gi|444724600|gb|ELW65202.1| Short stature homeobox protein 2 [Tupaia chinensis]
          Length = 184

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 2/80 (2%)

Query: 74  ENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
           +  E A G + E +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL  
Sbjct: 50  DRKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 109

Query: 132 LQVKFWFQNKRTQMKTQHER 151
            +V+ WFQN+R + + Q  +
Sbjct: 110 ARVQVWFQNRRAKCRKQENQ 129


>gi|224029377|gb|ACN33764.1| unknown [Zea mays]
          Length = 584

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 150/402 (37%), Gaps = 95/402 (23%)

Query: 399 PSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPA-------VRCRRRPSGCLIQE 451
           P+ L   R+ + +RY     +G+  + + SL      P+       VR    PSG LI+ 
Sbjct: 6   PTTLAAPRDFWTLRYTSGLEDGSLVICERSLTQSTGGPSGPNTPNFVRAEVLPSGYLIRP 65

Query: 452 MPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIP 511
              G S +  V+HV++D   V  + + L  +      K  +A L R   ++A   +  +P
Sbjct: 66  CEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKTTIAAL-RHIRQIAHESSGEMP 124

Query: 512 TGEVGVITNQDGRKSML--KLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSV 569
            G         GR+  +    ++R+   F   V+      W+ +S  GA+DV +    S 
Sbjct: 125 YG--------GGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSDGAEDVTIAINSSP 176

Query: 570 DDPGRPP------------GIVLSAATSFWLPVPPKRVFDFLRDENTRSEW-----DILS 612
           +    P             GI+ + A+     VPP  +  FLR+   RSEW     D  S
Sbjct: 177 NKLIGPHVNSSQLFTAIGGGILCAKASMLLQNVPPALLVRFLREH--RSEWADPGVDAYS 234

Query: 613 NGG--------------------VVQEMAHIANGRDTGNCVSLLRVNCLQSANSSQSNML 652
                                  V+  +AH     +    + L   +          +M 
Sbjct: 235 AAALRASPYAVPGLRASGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEVVLSRDMY 294

Query: 653 ILQE-SCTDPTASF----VIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL--------P 699
           +LQ  S  D  A+     +++AP+D             D   LLPSGF ++        P
Sbjct: 295 LLQLCSGVDENAAGACAQLVFAPID---------ESFADDAPLLPSGFRVIPLDAKTDPP 345

Query: 700 DGT-SLHGANIGEAASGG---------------SLLTVAFQI 725
            GT +L  A+  E  SGG               S+LT+AFQ 
Sbjct: 346 SGTRTLDLASTLEVGSGGTTRASSDASSTCNTRSVLTIAFQF 387


>gi|167234447|ref|NP_001107838.1| aristaless [Tribolium castaneum]
          Length = 309

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 49/81 (60%), Gaps = 2/81 (2%)

Query: 72  GSENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGL 129
           G +N +G+  +  E  P +K+R +R   T +Q++E+E  F    +PD   R+EL+ ++GL
Sbjct: 74  GPDNSDGSDPEPDEFAPKRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTREELAMKIGL 133

Query: 130 EPLQVKFWFQNKRTQMKTQHE 150
              +++ WFQN+R + + Q +
Sbjct: 134 TEARIQVWFQNRRAKWRKQEK 154


>gi|356505302|ref|XP_003521430.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Glycine max]
          Length = 218

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 8/96 (8%)

Query: 89  NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           NK+K+  R T +QI+ +E  F+E    D +++ +LSRELGL+P Q+  WFQN+RT+ KT+
Sbjct: 55  NKEKK-KRLTNNQIELLERSFQEEIKLDPERKMKLSRELGLQPRQIAVWFQNRRTRWKTK 113

Query: 149 H-------ERHENTQLRTENEKLRADNMRYREALSN 177
                    +H+   +  E +KL+ + M+ +  LS 
Sbjct: 114 QLEHLYDVLKHQYDVVSNEKQKLQEEVMKLKAMLSK 149


>gi|49115583|gb|AAH73479.1| Pitx2-A protein [Xenopus laevis]
          Length = 323

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 9/98 (9%)

Query: 64  EEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQH----QIQEMEAFFKECPHPDDKQ 119
           E  D  KS    +E  S DD    P+KKKR  R   H    Q+QE+EA F+   +PD   
Sbjct: 67  EAADKDKSHQSKNEDNSTDD----PSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMST 122

Query: 120 RKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           R+E++    L   +V+ WF+N+R + + + ER++ T+L
Sbjct: 123 REEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQTEL 159


>gi|308044467|ref|NP_001183573.1| uncharacterized protein LOC100502166 [Zea mays]
 gi|238013152|gb|ACR37611.1| unknown [Zea mays]
 gi|414886411|tpg|DAA62425.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 239

 Score = 57.0 bits (136), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/73 (35%), Positives = 44/73 (60%)

Query: 92  KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
           K   R ++ QI+ +E+ F      + +Q+ +L+RELGL+P QV  WFQNKR + K++   
Sbjct: 30  KNKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLE 89

Query: 152 HENTQLRTENEKL 164
            + + LR + + L
Sbjct: 90  RDYSALRDDYDAL 102


>gi|23592228|ref|NP_703149.1| homeobox protein ESX1 [Homo sapiens]
 gi|116241356|sp|Q8N693.3|ESX1_HUMAN RecName: Full=Homeobox protein ESX1; AltName: Full=Extraembryonic,
           spermatogenesis, homeobox 1; Contains: RecName:
           Full=Homeobox protein ESX1-N; Contains: RecName:
           Full=Homeobox protein ESX1-C
 gi|21629646|gb|AAM62141.1| ESX1L [Homo sapiens]
 gi|119623160|gb|EAX02755.1| extraembryonic, spermatogenesis, homeobox 1 homolog (mouse) [Homo
           sapiens]
          Length = 406

 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 1/91 (1%)

Query: 57  EIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR-HTQHQIQEMEAFFKECPHP 115
           E+ + +EE   +T  G +  EG    +  Q P +K+R     TQ Q+QE+E FF E  +P
Sbjct: 105 ELKQEQEEPPQTTVEGPQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYP 164

Query: 116 DDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           D   R+ L+  L L   +V+ WFQN+R + K
Sbjct: 165 DVVARERLAARLNLTEDRVQVWFQNRRAKWK 195


>gi|327266940|ref|XP_003218261.1| PREDICTED: short stature homeobox protein 2-like [Anolis
           carolinensis]
          Length = 167

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 2/80 (2%)

Query: 74  ENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
           E  E A G + E +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL  
Sbjct: 32  ERKEEAKGMEDEGQAKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 91

Query: 132 LQVKFWFQNKRTQMKTQHER 151
            +V+ WFQN+R + + Q  +
Sbjct: 92  ARVQVWFQNRRAKCRKQENQ 111


>gi|295913252|gb|ADG57884.1| transcription factor [Lycoris longituba]
          Length = 188

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 2/81 (2%)

Query: 87  RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           RP +KKR  R T +Q+Q +E  F+     + +++ +L+++LGL+P QV  WFQN+R + K
Sbjct: 62  RPPEKKR--RLTANQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 119

Query: 147 TQHERHENTQLRTENEKLRAD 167
           T+    +   L++    L+AD
Sbjct: 120 TKQLEKDYETLKSSYNVLKAD 140


>gi|46242599|gb|AAS83417.1| Hox16 [Oryza sativa Japonica Group]
          Length = 353

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           Q P KK+R    T  Q+  +E  F+E    + +++ EL+R+LGL+P QV  WFQN+R + 
Sbjct: 28  QLPEKKRRL---TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARW 84

Query: 146 KTQHERHENTQLRTENEKLRADN 168
           KT+    +  +L+   + LRAD+
Sbjct: 85  KTKQLERDFDRLKASFDALRADH 107


>gi|223973911|gb|ACN31143.1| unknown [Zea mays]
 gi|223974081|gb|ACN31228.1| unknown [Zea mays]
 gi|238011808|gb|ACR36939.1| unknown [Zea mays]
          Length = 330

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           Q P KK+R    T  Q+  +E  F+E    + +++ EL+R+LGL+P QV  WFQN+R + 
Sbjct: 70  QLPEKKRRL---TPEQVLLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARW 126

Query: 146 KTQHERHENTQLRTENEKLRADN 168
           KT+    +  +L+   + LRAD+
Sbjct: 127 KTKQLERDFDRLKASFDALRADH 149


>gi|195623632|gb|ACG33646.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
 gi|195624474|gb|ACG34067.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
          Length = 331

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           Q P KK+R    T  Q+  +E  F+E    + +++ EL+R+LGL+P QV  WFQN+R + 
Sbjct: 70  QLPEKKRRL---TPEQVLLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARW 126

Query: 146 KTQHERHENTQLRTENEKLRADN 168
           KT+    +  +L+   + LRAD+
Sbjct: 127 KTKQLERDFDRLKASFDALRADH 149


>gi|3236450|gb|AAC23684.1| paired-like homeodomain transcription factor Ptx1 [Gallus gallus]
          Length = 302

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 14/130 (10%)

Query: 35  QPTNMMEGQLH------PLDMTQNT-SESEIARLREEEFDSTKSGSENHEGASGDDQEQR 87
           QP++ M    H      P D  +N+ SES    + E+E    +SG + +E  + DD  ++
Sbjct: 20  QPSHDMASSFHLQRSSEPRDPIENSASESSDTEVPEKE----RSGEQKNEDGAADDPAKK 75

Query: 88  PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
             ++++    T  Q+QE+EA F+   +PD   R+E++    L   +V+ WF+N+R + + 
Sbjct: 76  KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWR- 134

Query: 148 QHERHENTQL 157
             +R  N Q+
Sbjct: 135 --KRERNQQM 142


>gi|413956878|gb|AFW89527.1| putative homeobox DNA-binding and leucine zipper domain family
           protein, partial [Zea mays]
          Length = 137

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 4/104 (3%)

Query: 67  DSTKSGSENHEGASGDDQEQR--PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELS 124
           +    G+ N +  S D   Q   P +KKR  R    Q++ +E  F+     + +++ +L+
Sbjct: 34  EEASCGATNEDEVSDDGSLQAVGPGEKKR--RLNVEQVRTLEKNFELGNKLEAERKLQLA 91

Query: 125 RELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
           R LGL+P QV  WFQN+R + KT+    +   LR + + ++ADN
Sbjct: 92  RALGLQPRQVAIWFQNRRARWKTKQLEKDYDALRRQLDAVKADN 135


>gi|357159570|ref|XP_003578488.1| PREDICTED: homeobox-leucine zipper protein HOX6-like [Brachypodium
           distachyon]
          Length = 243

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 4/76 (5%)

Query: 89  NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           NKK    R ++ QI+ +E+ F      + +Q+ +L+RELGL+P QV  WFQNKR + K++
Sbjct: 30  NKK----RFSEEQIKSLESMFSTQAKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 85

Query: 149 HERHENTQLRTENEKL 164
               +   LR + + L
Sbjct: 86  QLERQYAALRDDYDAL 101


>gi|195486714|ref|XP_002091622.1| GE12148 [Drosophila yakuba]
 gi|194177723|gb|EDW91334.1| GE12148 [Drosophila yakuba]
          Length = 906

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 7/100 (7%)

Query: 64  EEFDSTKSGSENHEGASG-DDQEQRPNKKKRYHRH-----TQHQIQEMEAFFKECPHPDD 117
           EE + T S  +  +  SG DD+ Q  N  K+ HR      T +Q+ E+E  F++  +PD 
Sbjct: 529 EELNQTNSSEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 588

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
             R+EL+ ++ L  ++V+ WFQN+R + + Q E+ E+ +L
Sbjct: 589 YSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKSESLRL 627


>gi|45593096|gb|AAS68137.1| homeodomain leucine zipper protein 16 [Oryza sativa Japonica Group]
          Length = 353

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           Q P KK+R    T  Q+  +E  F+E    + +++ EL+R+LGL+P QV  WFQN+R + 
Sbjct: 28  QLPEKKRRL---TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARW 84

Query: 146 KTQHERHENTQLRTENEKLRADN 168
           KT+    +  +L+   + LRAD+
Sbjct: 85  KTKQLERDFDRLKASFDALRADH 107


>gi|267844835|ref|NP_001161156.1| pituitary homeobox 1 [Gallus gallus]
 gi|267844837|ref|NP_001161157.1| pituitary homeobox 1 [Gallus gallus]
 gi|267844839|ref|NP_001161158.1| pituitary homeobox 1 [Gallus gallus]
          Length = 302

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 14/130 (10%)

Query: 35  QPTNMMEGQLH------PLDMTQNT-SESEIARLREEEFDSTKSGSENHEGASGDDQEQR 87
           QP++ M    H      P D  +N+ SES    + E+E    +SG + +E  + DD  ++
Sbjct: 20  QPSHDMASSFHLQRSSEPRDPIENSASESSDTEVPEKE----RSGEQKNEDGAADDPAKK 75

Query: 88  PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
             ++++    T  Q+QE+EA F+   +PD   R+E++    L   +V+ WF+N+R + + 
Sbjct: 76  KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWR- 134

Query: 148 QHERHENTQL 157
             +R  N Q+
Sbjct: 135 --KRERNQQM 142


>gi|224043036|ref|XP_002198003.1| PREDICTED: short stature homeobox protein [Taeniopygia guttata]
          Length = 291

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 9/135 (6%)

Query: 23  GGLGSSSGL--TLSQPTNMMEGQLH-PLDMTQNTSESEIARLREEEFDSTKSG----SEN 75
            GL  S  L  + S   +M E   H P+ + ++  ES+  +L+E     T  G     E 
Sbjct: 40  SGLARSRELGNSDSNLQDMTESSNHCPVHLFKDHVESDKDKLKEFNTGRTAEGIYECKEK 99

Query: 76  HEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
            E    +D++ +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL   +
Sbjct: 100 REDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEAR 159

Query: 134 VKFWFQNKRTQMKTQ 148
           V+ WFQN+R + + Q
Sbjct: 160 VQVWFQNRRAKCRKQ 174


>gi|359806041|ref|NP_001241177.1| uncharacterized protein LOC100793260 [Glycine max]
 gi|255635107|gb|ACU17911.1| unknown [Glycine max]
          Length = 251

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 53/102 (51%)

Query: 63  EEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKE 122
           +E   ++  G       S +   ++  K +   R +  QI+ +E  F+     + +++ +
Sbjct: 7   DENIQASTKGKNVESFTSLEAPRKKSKKIENKRRFSDEQIRSLECIFESESKLEPRKKMQ 66

Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
           L+R+LGL+P QV  WFQN+R + K++    E  +L+ E + L
Sbjct: 67  LARDLGLQPRQVAIWFQNRRARWKSKRIEQEYRKLKDEYDNL 108


>gi|297710671|ref|XP_002831994.1| PREDICTED: homeobox protein ESX1 [Pongo abelii]
          Length = 412

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 1/86 (1%)

Query: 62  REEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR-HTQHQIQEMEAFFKECPHPDDKQR 120
           +EE    T  G +  EG    +  Q P +K+R     TQ Q+QE+E FF E  +PD   R
Sbjct: 110 QEEPPQETVEGPQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDEAQYPDVVAR 169

Query: 121 KELSRELGLEPLQVKFWFQNKRTQMK 146
           + L+  L L   +V+ WFQN+R + K
Sbjct: 170 ERLAARLNLTEDRVQVWFQNRRAKWK 195


>gi|300796730|ref|NP_001178475.1| short stature homeobox protein [Bos taurus]
 gi|296490337|tpg|DAA32450.1| TPA: short stature homeobox-like isoform 2 [Bos taurus]
          Length = 306

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 19/144 (13%)

Query: 29  SGLTLSQPTNMMEGQLH---------PLDMTQNTSESEIARLREEEFDSTKSG------S 73
           SGL  S+   + E  LH         P+ + ++  ++E  +L+E  F S ++        
Sbjct: 43  SGLARSRELGVSESNLHDITEAGGHCPVHLFKDHVDTEKDKLKE--FGSGRAAEGIYDCK 100

Query: 74  ENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
           +  +    +D++ +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL  
Sbjct: 101 DKRDDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 160

Query: 132 LQVKFWFQNKRTQMKTQHERHENT 155
            +V+ WFQN+R + + Q  +  N+
Sbjct: 161 ARVQVWFQNRRAKCRKQENQMHNS 184


>gi|224053723|ref|XP_002297947.1| predicted protein [Populus trichocarpa]
 gi|222845205|gb|EEE82752.1| predicted protein [Populus trichocarpa]
          Length = 196

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 2/76 (2%)

Query: 89  NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           N  KR  R T  QI+ +E  F+    P+ + +++L+ ELGLEP QV  WFQN+R ++KT+
Sbjct: 14  NAYKR--RFTDEQIKFLEFMFESESRPESRVKQQLASELGLEPRQVAIWFQNRRARLKTK 71

Query: 149 HERHENTQLRTENEKL 164
               E + L+   + L
Sbjct: 72  QIEKEYSILKASYDVL 87


>gi|48057626|gb|AAT39949.1| Homeobox-leucine zipper protein HAT7 , putative [Solanum demissum]
          Length = 171

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 4/103 (3%)

Query: 67  DSTKSGSENH-EGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
           D   +  ENH E    DD  Q   KK+R +     Q++ +E  F+     + +++ +L+R
Sbjct: 62  DGNNACEENHGEDDLSDDGSQAGEKKRRLN---MEQVKTLEKNFELGNKLEPERKMQLAR 118

Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
            LGL+P Q+  WFQN+R + KT+    +   L+ + + ++A+N
Sbjct: 119 ALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKRQFDAIKAEN 161


>gi|449502845|ref|XP_004161759.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like, partial
           [Cucumis sativus]
          Length = 544

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 81/380 (21%), Positives = 145/380 (38%), Gaps = 69/380 (18%)

Query: 438 VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDR 497
           VR    PSG LI+    G S +  V+H+++D   V  + + L  +      K  +A L  
Sbjct: 14  VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLDPWSVPEVLRPLYKSSTLLAQKNTMAAL-- 71

Query: 498 QCERLASVMATNIPTGEVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGT 556
              RL   ++  +    V   T    R + L+ L++++   F   V+  T   W+ L   
Sbjct: 72  ---RLLRQISQEVSQPNV---TGWGRRPAALRALSQKLSRGFNEAVNGFTDEGWSLLEND 125

Query: 557 GADDVRVMTRKSVDD-------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDEN 603
           G DDV ++   S                P     ++ + A+     V P  +  FLR+  
Sbjct: 126 GVDDVTLLVNMSHGKTMMGANISYSNGFPSMSNAVLCAKASMLLQNVTPAMLIRFLREH- 184

Query: 604 TRSEW-----DILS-------------------NGGVVQEMAHIANGRDTGNCVSLLRVN 639
            RSEW     D  S                    G V+  +A      +    V    V 
Sbjct: 185 -RSEWADSSIDAYSAAAIKTGQCGLPGSHAGTFGGQVILPLAQTVEHEEFMEVVKFENVG 243

Query: 640 CLQSANSSQSNMLILQ-----ESCTDPTASFVIYAPVD---------------IVAMNVV 679
             +       ++ +LQ     +  T  T++ +I+AP+D               I+ ++  
Sbjct: 244 HYRDDMLMPGDIFLLQLCNGVDENTVGTSAELIFAPIDASFSDDAPILPSGFRIIPLDSG 303

Query: 680 LNGGDPDYVALLPSGFAILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGS 739
           ++   P+    L S   + P G    G   G++    S++T+AFQ + D      ++  +
Sbjct: 304 MDASSPNRTLDLASALDVGPAGNRASGDCAGQSGKSKSVMTIAFQFVFDVHLQDNVAAMA 363

Query: 740 VATVNNLIACTVERIKASLS 759
              V ++IA +V+R+  +LS
Sbjct: 364 RQYVRSIIA-SVQRVALALS 382


>gi|195585235|ref|XP_002082395.1| GD11547 [Drosophila simulans]
 gi|194194404|gb|EDX07980.1| GD11547 [Drosophila simulans]
          Length = 903

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 7/100 (7%)

Query: 64  EEFDSTKSGSENHEGASG-DDQEQRPNKKKRYHRH-----TQHQIQEMEAFFKECPHPDD 117
           E+ + T S  +  +  SG DD+ Q  N  K+ HR      T +Q+ E+E  F++  +PD 
Sbjct: 526 EDLNQTNSSEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 585

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
             R+EL+ ++ L  ++V+ WFQN+R + + Q E+ E+ +L
Sbjct: 586 YSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKSESLRL 624


>gi|62857711|ref|NP_001017227.1| paired-like homeodomain 2 [Xenopus (Silurana) tropicalis]
 gi|166796151|gb|AAI59023.1| paired-like homeodomain 2 [Xenopus (Silurana) tropicalis]
          Length = 345

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 9/98 (9%)

Query: 64  EEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQH----QIQEMEAFFKECPHPDDKQ 119
           E  D  KS    +E +S DD    P+KKKR  R   H    Q+QE+EA F+   +PD   
Sbjct: 87  EAADKDKSHQSKNEDSSTDD----PSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMST 142

Query: 120 RKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           R+E++    L   +V+ WF+N+R + + + ER++  +L
Sbjct: 143 REEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 179


>gi|297823473|ref|XP_002879619.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325458|gb|EFH55878.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 179

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 53/100 (53%)

Query: 77  EGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKF 136
           E   G++      K+KR  + T  Q++ +E  F+E    +  ++ +LS+E+GL+P Q+  
Sbjct: 57  ESGYGEESNSFNGKEKRKKKMTSEQLKFLETSFQEEIKLNPDRKMKLSKEIGLQPRQIAV 116

Query: 137 WFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALS 176
           WFQN++ + K +   H    LR E + +  +    +E L+
Sbjct: 117 WFQNRKARWKNKQLEHLYESLRQEFDVVSREKELLQEELT 156


>gi|194881725|ref|XP_001974972.1| GG22067 [Drosophila erecta]
 gi|190658159|gb|EDV55372.1| GG22067 [Drosophila erecta]
          Length = 898

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 7/100 (7%)

Query: 64  EEFDSTKSGSENHEGASG-DDQEQRPNKKKRYHRH-----TQHQIQEMEAFFKECPHPDD 117
           EE + T S  +  +  SG DD+ Q  N  K+ HR      T +Q+ E+E  F++  +PD 
Sbjct: 521 EELNQTNSSEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 580

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
             R+EL+ ++ L  ++V+ WFQN+R + + Q E+ E+ +L
Sbjct: 581 YSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKSESLRL 619


>gi|301614476|ref|XP_002936715.1| PREDICTED: retinal homeobox protein Rx-B [Xenopus (Silurana)
           tropicalis]
          Length = 326

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 60/100 (60%), Gaps = 4/100 (4%)

Query: 71  SGSENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELG 128
           S S N +    DD EQ+P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ 
Sbjct: 111 STSNNSDNKLSDD-EQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVN 169

Query: 129 LEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
           L  ++V+ WFQN+R + + Q E+ E T ++ ++  + + N
Sbjct: 170 LPEVRVQVWFQNRRAKWRRQ-EKLEVTSMKLQDSPILSFN 208


>gi|212275139|ref|NP_001130421.1| uncharacterized protein LOC100191517 [Zea mays]
 gi|194689074|gb|ACF78621.1| unknown [Zea mays]
 gi|194700286|gb|ACF84227.1| unknown [Zea mays]
 gi|238011534|gb|ACR36802.1| unknown [Zea mays]
          Length = 290

 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           Q P KK+R    T  Q+  +E  F+E    + +++ EL+R+LGL+P QV  WFQN+R + 
Sbjct: 30  QLPEKKRRL---TPEQVLLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARW 86

Query: 146 KTQHERHENTQLRTENEKLRADN 168
           KT+    +  +L+   + LRAD+
Sbjct: 87  KTKQLERDFDRLKASFDALRADH 109


>gi|242070535|ref|XP_002450544.1| hypothetical protein SORBIDRAFT_05g006726 [Sorghum bicolor]
 gi|241936387|gb|EES09532.1| hypothetical protein SORBIDRAFT_05g006726 [Sorghum bicolor]
          Length = 58

 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 39/57 (68%)

Query: 458 KVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPTGE 514
           ++T V H E D+  V  L++ L+ +GN FGA+RW+A+L RQ E LA + ++ +P G+
Sbjct: 1   QITRVVHAEYDETMVPTLFRPLLRSGNPFGAQRWLASLQRQYEYLAVLHSSQVPRGD 57


>gi|374533822|gb|AEZ53824.1| paired-like homeodomain 2, partial [Spea bombifrons]
          Length = 250

 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 9/98 (9%)

Query: 64  EEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQH----QIQEMEAFFKECPHPDDKQ 119
           E  D  KS S  +E ++ DD    P+KKKR  R   H    Q+QE+EA F+   +PD   
Sbjct: 10  EATDKDKSHSSKNEDSNADD----PSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMST 65

Query: 120 RKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           R+E++    L   +V+ WF+N+R + + + ER++  +L
Sbjct: 66  REEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 102


>gi|432856452|ref|XP_004068428.1| PREDICTED: retinal homeobox protein Rx1-like [Oryzias latipes]
          Length = 344

 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 11/111 (9%)

Query: 41  EGQLHPLDMTQNTSESEIARLREE-EFDSTKSGSENHEGASGDDQEQRPNKKKRYHR--H 97
           + Q H   +  N S+ E+A LR+  + D  KS       +S DD    P KK R +R   
Sbjct: 99  QHQYHDTGLFANQSDEELAELRQSIQMDEGKS-----PASSKDDP---PKKKHRRNRTTF 150

Query: 98  TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           T +Q+ E+E  F++  +PD   R+EL+ ++ L  ++V+ WFQN+R + + Q
Sbjct: 151 TTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ 201


>gi|402910991|ref|XP_003918127.1| PREDICTED: homeobox protein ESX1 [Papio anubis]
          Length = 359

 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)

Query: 62  REEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR-HTQHQIQEMEAFFKECPHPDDKQR 120
           +EE   +T  G +  EG    +  Q P +K+R     TQ Q+QE+E FF E  +PD   R
Sbjct: 108 QEEPPQATVEGPQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDEAQYPDVVAR 167

Query: 121 KELSRELGLEPLQVKFWFQNKRTQMK 146
           + L+  L L   +V+ WFQN+R + K
Sbjct: 168 ERLAARLNLTEDRVQVWFQNRRAKWK 193


>gi|224068062|ref|XP_002187978.1| PREDICTED: pituitary homeobox 1 isoform 1 [Taeniopygia guttata]
 gi|449475013|ref|XP_004175459.1| PREDICTED: pituitary homeobox 1 isoform 2 [Taeniopygia guttata]
          Length = 302

 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 14/130 (10%)

Query: 35  QPTNMMEGQLH------PLDMTQNT-SESEIARLREEEFDSTKSGSENHEGASGDDQEQR 87
           QP++ M    H      P D   N+ SES    + E+E    +SG + +E  + DD  ++
Sbjct: 20  QPSHDMASSFHLQRSSEPRDPIDNSASESSDTEVPEKE----RSGEQKNEDGAADDPAKK 75

Query: 88  PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
             ++++    T  Q+QE+EA F+   +PD   R+E++    L   +V+ WF+N+R + + 
Sbjct: 76  KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWR- 134

Query: 148 QHERHENTQL 157
             +R  N Q+
Sbjct: 135 --KRERNQQM 142


>gi|296490338|tpg|DAA32451.1| TPA: short stature homeobox-like isoform 1 [Bos taurus]
          Length = 294

 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 19/144 (13%)

Query: 29  SGLTLSQPTNMMEGQLH---------PLDMTQNTSESEIARLREEEFDSTKSG------S 73
           SGL  S+   + E  LH         P+ + ++  ++E  +L+E  F S ++        
Sbjct: 43  SGLARSRELGVSESNLHDITEAGGHCPVHLFKDHVDTEKDKLKE--FGSGRAAEGIYDCK 100

Query: 74  ENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
           +  +    +D++ +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL  
Sbjct: 101 DKRDDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 160

Query: 132 LQVKFWFQNKRTQMKTQHERHENT 155
            +V+ WFQN+R + + Q  +  N+
Sbjct: 161 ARVQVWFQNRRAKCRKQENQMHNS 184


>gi|41282110|ref|NP_571300.2| retinal homeobox protein Rx1 [Danio rerio]
 gi|38173897|gb|AAH60890.1| Retinal homeobox gene 1 [Danio rerio]
          Length = 330

 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 10/107 (9%)

Query: 44  LHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR--HTQHQ 101
            H  DM  N  + ++  LR+    + +S S++ + A G    ++P KK R +R   T +Q
Sbjct: 97  FHDADMFSNKCDGDLGDLRK----AIESDSKSPDSADG----EQPKKKHRRNRTTFTTYQ 148

Query: 102 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           + E+E  F++  +PD   R+EL+ ++ L  ++V+ WFQN+R + + Q
Sbjct: 149 LHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ 195


>gi|224069752|ref|XP_002326405.1| predicted protein [Populus trichocarpa]
 gi|222833598|gb|EEE72075.1| predicted protein [Populus trichocarpa]
          Length = 121

 Score = 56.2 bits (134), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 4/91 (4%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           KKKR    T  Q++ +E  F+E    D  ++ +LSRELGL+P Q+  WFQN+R + K + 
Sbjct: 31  KKKRL---TSDQLESLEKSFQEEIKLDPDRKMKLSRELGLQPRQIAVWFQNRRARWKAKQ 87

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASC 180
                  L+ E + +  +  + +E + N SC
Sbjct: 88  LERLYDNLKQEFDSVSKEKQKLQEEV-NCSC 117


>gi|403256605|ref|XP_003920957.1| PREDICTED: uncharacterized protein LOC101038269 [Saimiri
           boliviensis boliviensis]
          Length = 586

 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 5/110 (4%)

Query: 49  MTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRH-TQHQIQEMEA 107
           +  + SES    L E+E      G E+  GA G +   +  K++R   H T  Q+QE+EA
Sbjct: 111 LENSASESSDTELPEKERGGEPKGPED-SGAGGAEDPAKKKKQRRQRTHFTSQQLQELEA 169

Query: 108 FFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
            F+   +PD   R+E++    L   +V+ WF+N+R + +   +R  N QL
Sbjct: 170 TFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWR---KRERNQQL 216


>gi|17380298|sp|O42356.2|RX1_DANRE RecName: Full=Retinal homeobox protein Rx1
 gi|9903605|gb|AAB62325.2| retinal homeobox protein [Danio rerio]
          Length = 330

 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 10/107 (9%)

Query: 44  LHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR--HTQHQ 101
            H  DM  N  + ++  LR+    + +S S++ + A G    ++P KK R +R   T +Q
Sbjct: 97  FHDADMFSNKCDGDLGDLRK----AIESDSKSPDSADG----EQPKKKHRRNRTTFTTYQ 148

Query: 102 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           + E+E  F++  +PD   R+EL+ ++ L  ++V+ WFQN+R + + Q
Sbjct: 149 LHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ 195


>gi|397497822|ref|XP_003819703.1| PREDICTED: homeobox protein ESX1 [Pan paniscus]
          Length = 376

 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 1/91 (1%)

Query: 57  EIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR-HTQHQIQEMEAFFKECPHP 115
           E+ + +EE   +T  G +  EG    +  Q P +K+R     TQ Q+QE+E FF E  +P
Sbjct: 105 ELKQEQEEPPQATVEGPQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYP 164

Query: 116 DDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           D   R+ L+  L L   +V+ WFQN+R + K
Sbjct: 165 DVVARERLAARLNLTEDRVQVWFQNRRAKWK 195


>gi|332861345|ref|XP_001138237.2| PREDICTED: homeobox protein ESX1 [Pan troglodytes]
          Length = 394

 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 1/91 (1%)

Query: 57  EIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR-HTQHQIQEMEAFFKECPHP 115
           E+ + +EE   +T  G +  EG    +  Q P +K+R     TQ Q+QE+E FF E  +P
Sbjct: 105 ELKQEQEEPPQATVEGPQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYP 164

Query: 116 DDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           D   R+ L+  L L   +V+ WFQN+R + K
Sbjct: 165 DVVARERLAARLNLTEDRVQVWFQNRRAKWK 195


>gi|348504974|ref|XP_003440036.1| PREDICTED: retinal homeobox protein Rx1-like [Oreochromis
           niloticus]
          Length = 355

 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 19/133 (14%)

Query: 19  NGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQNTSESEIARLREEEFDSTKSGSENHEG 78
           +G++  L SSSG          + Q H   +  N  + E++ LR+          E+ EG
Sbjct: 85  SGHLSSLRSSSGTE--------QQQYHDSSLFANKCDQELSELRK--------SIESDEG 128

Query: 79  ASGD-DQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVK 135
            S +  ++++P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  ++V+
Sbjct: 129 KSPEPSKDEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 188

Query: 136 FWFQNKRTQMKTQ 148
            WFQN+R + + Q
Sbjct: 189 VWFQNRRAKWRRQ 201


>gi|195347243|ref|XP_002040163.1| GM15498 [Drosophila sechellia]
 gi|194135512|gb|EDW57028.1| GM15498 [Drosophila sechellia]
          Length = 220

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 9/121 (7%)

Query: 72  GSEN---HEGASGDDQEQRPNKKKRYH---RHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
           GS N   H  + GDD     +K K+       T +Q+ E+E  F E  +PD   R+E++ 
Sbjct: 88  GSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIAS 147

Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGG 185
           +L L   +V+ WFQN+R + + Q ERH    ++ ++ KL  D  +   A S    P+  G
Sbjct: 148 KLHLTEARVQVWFQNRRAKFRKQ-ERHAIYIMKDKSSKL--DGRKNPAAGSKYLGPSLKG 204

Query: 186 P 186
           P
Sbjct: 205 P 205


>gi|17380174|sp|Q9PWR3.1|PITX2_XENLA RecName: Full=Pituitary homeobox 2; AltName: Full=Homeobox protein
           PITX2; AltName: Full=Paired-like homeodomain
           transcription factor 2; AltName: Full=xPtx2
 gi|3955069|emb|CAA06696.1| XPtx2a [Xenopus laevis]
          Length = 326

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 9/95 (9%)

Query: 67  DSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQH----QIQEMEAFFKECPHPDDKQRKE 122
           D  KS    +E +S DD    P+KKKR  R   H    Q+QE+EA F+   +PD   R+E
Sbjct: 71  DKDKSHQTKNEDSSTDD----PSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREE 126

Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           ++    L   +V+ WF+N+R + + + ER++  +L
Sbjct: 127 IAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 160


>gi|195586201|ref|XP_002082866.1| GD25001 [Drosophila simulans]
 gi|194194875|gb|EDX08451.1| GD25001 [Drosophila simulans]
          Length = 220

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 9/121 (7%)

Query: 72  GSEN---HEGASGDDQEQRPNKKKRYH---RHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
           GS N   H  + GDD     +K K+       T +Q+ E+E  F E  +PD   R+E++ 
Sbjct: 88  GSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIAS 147

Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGG 185
           +L L   +V+ WFQN+R + + Q ERH    ++ ++ KL  D  +   A S    P+  G
Sbjct: 148 KLHLTEARVQVWFQNRRAKFRKQ-ERHAIYIMKDKSSKL--DGRKNPAAGSKYLGPSLKG 204

Query: 186 P 186
           P
Sbjct: 205 P 205


>gi|156379359|ref|XP_001631425.1| predicted protein [Nematostella vectensis]
 gi|156218465|gb|EDO39362.1| predicted protein [Nematostella vectensis]
          Length = 73

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 2/71 (2%)

Query: 82  DDQEQRPNKKKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQ 139
           D       KKK  +R T  Q+QI+E+E  F + P+PD   R+EL+ +LGL   +++ WFQ
Sbjct: 3   DSSANAAKKKKTRYRTTFSQYQIEELERAFDKAPYPDVFAREELAAKLGLTEARIQVWFQ 62

Query: 140 NKRTQMKTQHE 150
           N+R + + + +
Sbjct: 63  NRRAKWRKREK 73


>gi|399920241|gb|AFP55588.1| homeobox leucine zipper [Rosa rugosa]
          Length = 216

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 48/81 (59%)

Query: 84  QEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRT 143
           + ++ NK +   R +  QI+ +E+ F+     + +++ +++RELGL+P QV  WFQN+R 
Sbjct: 15  KRKKNNKSQNSRRFSDEQIKLLESIFEADSKLEPRRKVQVARELGLQPRQVAIWFQNRRA 74

Query: 144 QMKTQHERHENTQLRTENEKL 164
           + K++    +   LR E + L
Sbjct: 75  RWKSKQIEQDFRTLRNEYDLL 95


>gi|171692673|ref|XP_001911261.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946285|emb|CAP73086.1| unnamed protein product [Podospora anserina S mat+]
          Length = 707

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 6/83 (7%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL-GLEPLQVKFWFQNKRTQMK-- 146
           K KR+ R T  Q + + + F + PHPD   R+ LSRE+ GL P QV+ WFQN+R ++K  
Sbjct: 222 KMKRF-RLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLSPRQVQVWFQNRRAKIKRL 280

Query: 147 TQHERHENTQLRTENEKLRADNM 169
           T  +R    ++R   E    DN+
Sbjct: 281 TADDRERMIKMRAVPEDF--DNL 301


>gi|148234542|ref|NP_001081756.1| paired-like homeodomain 2 [Xenopus laevis]
 gi|3406613|gb|AAC29426.1| homeodomain transcription factor Pitx2 [Xenopus laevis]
          Length = 326

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 9/95 (9%)

Query: 67  DSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQH----QIQEMEAFFKECPHPDDKQRKE 122
           D  KS    +E +S DD    P+KKKR  R   H    Q+QE+EA F+   +PD   R+E
Sbjct: 71  DKDKSHQTKNEDSSTDD----PSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREE 126

Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           ++    L   +V+ WF+N+R + + + ER++  +L
Sbjct: 127 IAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 160


>gi|15239522|ref|NP_200209.1| homeobox-leucine zipper protein ATHB-52 [Arabidopsis thaliana]
 gi|75262744|sp|Q9FN29.1|ATB52_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-52; AltName:
           Full=HD-ZIP protein ATHB-52; AltName: Full=Homeodomain
           transcription factor ATHB-52
 gi|10177260|dbj|BAB10728.1| unnamed protein product [Arabidopsis thaliana]
 gi|54261707|gb|AAV31157.1| At5g53980 [Arabidopsis thaliana]
 gi|61656133|gb|AAX49369.1| At5g53980 [Arabidopsis thaliana]
 gi|110738303|dbj|BAF01080.1| hypothetical protein [Arabidopsis thaliana]
 gi|332009052|gb|AED96435.1| homeobox-leucine zipper protein ATHB-52 [Arabidopsis thaliana]
          Length = 156

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 3/89 (3%)

Query: 82  DDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 141
           + Q Q  NKKKR    TQ Q++++E  F      +   + +LS +LGL   QV  WFQNK
Sbjct: 3   NSQSQGKNKKKRL---TQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNK 59

Query: 142 RTQMKTQHERHENTQLRTENEKLRADNMR 170
           R + KTQ    ++  L++++E   +D  +
Sbjct: 60  RARFKTQSLEVQHCTLQSKHEAALSDKAK 88


>gi|310792453|gb|EFQ27980.1| homeobox domain-containing protein [Glomerella graminicola M1.001]
          Length = 666

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL-GLEPLQVKFWFQNKRTQMK-- 146
           K KR+ R T  Q + + + F + PHPD   R+ LSRE+ GL P QV+ WFQN+R ++K  
Sbjct: 201 KMKRF-RLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLSPRQVQVWFQNRRAKIKRL 259

Query: 147 TQHERHENTQLRT---ENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLR 200
           T  +R    ++R    + + ++A +  Y  A+   S P    P   G  S+ +H +R
Sbjct: 260 TADDRDRMIKMRAVPDDFDNIQALHSPY-GAVHGLSTP-LSSPMNFGTQSYADHMIR 314


>gi|242049932|ref|XP_002462710.1| hypothetical protein SORBIDRAFT_02g030660 [Sorghum bicolor]
 gi|241926087|gb|EER99231.1| hypothetical protein SORBIDRAFT_02g030660 [Sorghum bicolor]
          Length = 243

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 44/73 (60%)

Query: 92  KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
           K   R ++ QI+ +E+ F      + +Q+ +L+RELGL+P QV  WFQNKR + K++   
Sbjct: 32  KNKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLE 91

Query: 152 HENTQLRTENEKL 164
            E + LR + + L
Sbjct: 92  REYSALRDDYDAL 104


>gi|224102511|ref|XP_002312706.1| predicted protein [Populus trichocarpa]
 gi|222852526|gb|EEE90073.1| predicted protein [Populus trichocarpa]
          Length = 302

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 2/85 (2%)

Query: 83  DQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKR 142
           D   +P++KKR  R T  Q+Q +E  F+     + +++ +L++ELGL+P QV  WFQN+R
Sbjct: 72  DAHLKPSEKKR--RLTAAQVQFLEKSFEAENKLEPERKMQLAKELGLQPRQVAIWFQNRR 129

Query: 143 TQMKTQHERHENTQLRTENEKLRAD 167
            + K +    +   LR   +KL+AD
Sbjct: 130 ARFKNKQLERDYDSLRISFDKLKAD 154


>gi|187609464|sp|Q01IK0.2|HOX22_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX22; AltName:
           Full=HD-ZIP protein HOX22; AltName: Full=Homeodomain
           transcription factor HOX22; AltName: Full=OsHox22
 gi|187609465|sp|Q7XUJ5.2|HOX22_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX22; AltName:
           Full=HD-ZIP protein HOX22; AltName: Full=Homeodomain
           transcription factor HOX22; AltName: Full=OsHox22
          Length = 276

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 92  KRYHRHTQHQIQEMEAFFK-ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           +R  R T+ QI+ +E+ F       + +++ EL+RELGL+P QV  WFQNKR + +++  
Sbjct: 72  ERKRRFTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQL 131

Query: 151 RHENTQLRTENEKLRA 166
            H+   LR++ + L +
Sbjct: 132 EHDYAALRSKYDALHS 147


>gi|359473283|ref|XP_002269605.2| PREDICTED: homeobox-leucine zipper protein HAT5-like [Vitis
           vinifera]
 gi|296086435|emb|CBI32024.3| unnamed protein product [Vitis vinifera]
          Length = 321

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 13/107 (12%)

Query: 61  LREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQR 120
           L EEE     +G E+ EG        RP KK+R    T  Q+Q +E  F+     + +++
Sbjct: 67  LHEEE-----NGDEDFEGCF-----HRPEKKRRL---TAGQVQFLERNFEVENKLEPERK 113

Query: 121 KELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRAD 167
            +L++ELGL+P QV  WFQN+R + KT+    +   L+   + L+AD
Sbjct: 114 NQLAKELGLQPRQVAIWFQNRRARFKTKQLEKDYDSLKASYDSLKAD 160


>gi|372266156|ref|NP_001243201.1| visual system homeobox 1 isoform d [Homo sapiens]
 gi|112820194|gb|ABI23978.1| visual system homeobox 1 transcript variant 6 [Homo sapiens]
          Length = 301

 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 5/104 (4%)

Query: 62  REEEFDSTKSGSENHEGASGDDQEQRP---NKKKRYHR--HTQHQIQEMEAFFKECPHPD 116
           R++  DS  +  E+ +    +D +  P    +KKR HR   T HQ++E+E  F E  +PD
Sbjct: 131 RQKRSDSVSTSDEDSQSEDRNDLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPD 190

Query: 117 DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTE 160
              R+ L+ +  L   +++ WFQN+R + + + +R   + +  E
Sbjct: 191 VYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAE 234


>gi|194885740|ref|XP_001976486.1| GG19984 [Drosophila erecta]
 gi|190659673|gb|EDV56886.1| GG19984 [Drosophila erecta]
          Length = 219

 Score = 55.8 bits (133), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 6/117 (5%)

Query: 73  SENHEGASGDDQEQRPNKKKRYH---RHTQHQIQEMEAFFKECPHPDDKQRKELSRELGL 129
           S+ H  + GDD     +K K+       T +Q+ E+E  F E  +PD   R+E++ +L L
Sbjct: 91  SDFHLKSFGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHL 150

Query: 130 EPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGP 186
              +V+ WFQN+R + + Q ERH    ++ ++ K+  D  +   A S    P+  GP
Sbjct: 151 TEARVQVWFQNRRAKFRKQ-ERHAIYIMKDKSSKM--DGRKNPAAGSKYLGPSLKGP 204


>gi|358255529|dbj|GAA57221.1| homeobox protein aristaless-like 4 [Clonorchis sinensis]
          Length = 838

 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)

Query: 91  KKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           KK  HR T   HQ+  +EA F  CP+PD   R++++  L L   +V+ WFQN+R + + Q
Sbjct: 228 KKARHRTTFSVHQLSILEAAFDSCPYPDAVTREDIASRLALSESRVQVWFQNRRAKWRKQ 287

Query: 149 HERH 152
              H
Sbjct: 288 ENGH 291


>gi|242073868|ref|XP_002446870.1| hypothetical protein SORBIDRAFT_06g024000 [Sorghum bicolor]
 gi|241938053|gb|EES11198.1| hypothetical protein SORBIDRAFT_06g024000 [Sorghum bicolor]
          Length = 270

 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 1/76 (1%)

Query: 92  KRYHRHTQHQIQEMEAFFK-ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           +R  R T+ QI+ +E+ F       + +++ EL+RELGL+P QV  WFQNKR + +++  
Sbjct: 64  ERKRRFTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQL 123

Query: 151 RHENTQLRTENEKLRA 166
            H+   LR + + L A
Sbjct: 124 EHDYAVLRAKFDDLHA 139


>gi|29367373|gb|AAO72559.1| homeodomain leucine zipper protein-like protein [Oryza sativa
           Japonica Group]
          Length = 278

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 92  KRYHRHTQHQIQEMEAFFK-ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           +R  R T+ QI+ +E+ F       + +++ EL+RELGL+P QV  WFQNKR + +++  
Sbjct: 74  ERKRRFTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQL 133

Query: 151 RHENTQLRTENEKLRA 166
            H+   LR++ + L +
Sbjct: 134 EHDYAALRSKYDALHS 149


>gi|2950355|emb|CAA11241.1| homebox protein DRx [Drosophila melanogaster]
          Length = 902

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 7/100 (7%)

Query: 64  EEFDSTKSGSENHEGASG-DDQEQRPNKKKRYHRH-----TQHQIQEMEAFFKECPHPDD 117
           E+ + T S  +  +  SG DD+ Q  N  K+ HR      T +Q+ E+E  F++  +PD 
Sbjct: 527 EDLNQTNSSEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 586

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
             R+EL+ ++ L  ++V+ WFQN+R + + Q E+ E+ +L
Sbjct: 587 YSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKSESLRL 625


>gi|367024589|ref|XP_003661579.1| hypothetical protein MYCTH_2301118 [Myceliophthora thermophila ATCC
           42464]
 gi|347008847|gb|AEO56334.1| hypothetical protein MYCTH_2301118 [Myceliophthora thermophila ATCC
           42464]
          Length = 680

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 4/78 (5%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL-GLEPLQVKFWFQNKRTQMK-- 146
           K KR+ R T  Q + + + F + PHPD   R+ LSRE+ GL P QV+ WFQN+R ++K  
Sbjct: 192 KMKRF-RLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLSPRQVQVWFQNRRAKIKRL 250

Query: 147 TQHERHENTQLRTENEKL 164
           T  +R    ++R   E  
Sbjct: 251 TADDRERMMKMRAVPEDF 268


>gi|356570812|ref|XP_003553578.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Glycine max]
          Length = 214

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 11/113 (9%)

Query: 87  RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           R NK+K+  R T +QI+ +E  F+E    D +++ +LSRELGL+P Q+  WFQN+RT+ K
Sbjct: 52  RGNKEKK-KRLTNNQIELLERSFQEEIKLDPERKMKLSRELGLQPRQIAVWFQNRRTRWK 110

Query: 147 TQHERHENTQLR-------TENEKLRADNMRYREALSNAS---CPNCGGPTAI 189
            +   H    L+        E +KL+ + ++ +  LS          GG T I
Sbjct: 111 AKQLEHLYDMLKHQYDVVSNEKQKLQEEVIKLKAMLSKQQGYWTQKFGGYTEI 163


>gi|185135921|ref|NP_001117695.1| transcription factor Nkx2.1c [Oncorhynchus mykiss]
 gi|62241056|dbj|BAD93685.1| transcription factor Nkx2.1c [Oncorhynchus mykiss]
          Length = 344

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 42/72 (58%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           ++KR    +Q Q+ E+E  FK+  +    +R+ L+  + L P QVK WFQN R +MK Q 
Sbjct: 158 RRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQA 217

Query: 150 ERHENTQLRTEN 161
           +   N Q++ EN
Sbjct: 218 KDKANQQIQQEN 229


>gi|380088838|emb|CCC13273.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 724

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 2/58 (3%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL-GLEPLQVKFWFQNKRTQMK 146
           K KR+ R T  Q + + + F + PHPD   R+ LSRE+ GL P QV+ WFQN+R ++K
Sbjct: 223 KMKRF-RLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLSPRQVQVWFQNRRAKIK 279


>gi|147781895|emb|CAN69944.1| hypothetical protein VITISV_006132 [Vitis vinifera]
          Length = 161

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 2/52 (3%)

Query: 70  KSGSENHEGASGDDQ--EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQ 119
           +SG++N +  SG+DQ     P +KKRYHRH   QIQE EA  +EC HP +KQ
Sbjct: 97  RSGTDNMDDVSGNDQVAADNPPRKKRYHRHALRQIQEFEALLQECLHPGEKQ 148


>gi|357614288|gb|EHJ69004.1| paired-like family homeodomain transcription factor [Danaus
           plexippus]
          Length = 341

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 19/162 (11%)

Query: 80  SGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFW 137
           S D  +  P +K+R +R   T  Q++E+E  F    +PD   R+EL+ ++GL   +++ W
Sbjct: 114 SDDPDDFAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVW 173

Query: 138 FQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPN----CGGPTAIGEMS 193
           FQN+R + + Q             EK+      Y   L+  + P        P    ++ 
Sbjct: 174 FQNRRAKWRKQ-------------EKVGPQGHPYNPYLAGGAAPPPSVVASMPNPFSQLG 220

Query: 194 FDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPV 235
           F        NA      +    +  +Y+G P+   PL S P+
Sbjct: 221 FGFRKPFDANALASFRYNSTPVLGTQYLGTPLSRPPLFSAPM 262


>gi|323388589|gb|ADX60099.1| HB homeobox transcription factor [Zea mays]
          Length = 279

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 3/80 (3%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKE---CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           + +R  R T+ QI+ +E+ F+        + +++ EL+RELGL+P QV  WFQNKR + +
Sbjct: 55  RGERKRRFTEEQIRSLESTFRARHGHAKLEPREKAELARELGLQPRQVAIWFQNKRARWR 114

Query: 147 TQHERHENTQLRTENEKLRA 166
           ++   H+   LR + + L A
Sbjct: 115 SKQLEHDYAVLRAKFDDLHA 134


>gi|15228625|ref|NP_191748.1| homeobox-leucine zipper protein ATHB-12 [Arabidopsis thaliana]
 gi|75182677|sp|Q9M276.1|ATB12_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-12; AltName:
           Full=HD-ZIP protein ATHB-12; AltName: Full=Homeodomain
           transcription factor ATHB-12
 gi|6899887|emb|CAB71896.1| homeobox-leucine zipper protein ATHB-12 [Arabidopsis thaliana]
 gi|16648917|gb|AAL24310.1| homeobox-leucine zipper protein ATHB-12 [Arabidopsis thaliana]
 gi|21592794|gb|AAM64743.1| homeobox-leucine zipper protein ATHB-12 [Arabidopsis thaliana]
 gi|25084309|gb|AAN72217.1| homeobox-leucine zipper protein ATHB-12 [Arabidopsis thaliana]
 gi|332646754|gb|AEE80275.1| homeobox-leucine zipper protein ATHB-12 [Arabidopsis thaliana]
          Length = 235

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 40/69 (57%)

Query: 96  RHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENT 155
           R ++ QI+ +E  F+     + +++ +++RELGL+P QV  WFQNKR + KT+    E  
Sbjct: 33  RFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEYN 92

Query: 156 QLRTENEKL 164
            LR     L
Sbjct: 93  TLRANYNNL 101


>gi|326527745|dbj|BAK08147.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 292

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 43/72 (59%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERH 152
           R  R ++ QI+ +E+ F      + +Q+ +L+RELGL+P QV  WFQNKR + K++    
Sbjct: 68  RKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLER 127

Query: 153 ENTQLRTENEKL 164
           +   LR + + L
Sbjct: 128 QYAALRDDYDAL 139


>gi|312381847|gb|EFR27493.1| hypothetical protein AND_05774 [Anopheles darlingi]
          Length = 524

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 5/67 (7%)

Query: 89  NKKKRYHRH-TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
           NK++R   + T  Q+ E+E  F+E  +PD   R+ELS+ LGL   +V+ WFQN+R + + 
Sbjct: 440 NKQRRSRTNFTLEQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR- 498

Query: 148 QHERHEN 154
              +HEN
Sbjct: 499 ---KHEN 502


>gi|260817384|ref|XP_002603567.1| hypothetical protein BRAFLDRAFT_79100 [Branchiostoma floridae]
 gi|229288886|gb|EEN59578.1| hypothetical protein BRAFLDRAFT_79100 [Branchiostoma floridae]
          Length = 275

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 48/85 (56%)

Query: 64  EEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKEL 123
           E  D +K G +  +  S + ++ +  +++     T  Q+QE+E  F E  +PD   R+EL
Sbjct: 78  ENKDPSKPGEKKDDIESPNSKDGKLKQRRSRTNFTLEQLQELERLFDETHYPDAFMREEL 137

Query: 124 SRELGLEPLQVKFWFQNKRTQMKTQ 148
           S+ LGL   +V+ WFQN+R + + Q
Sbjct: 138 SQRLGLSEARVQVWFQNRRAKCRKQ 162


>gi|194697640|gb|ACF82904.1| unknown [Zea mays]
          Length = 272

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 3/83 (3%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           Q P KK+R    T  Q+Q +E  F+E    + +++ EL+R LG+ P QV  WFQN+R + 
Sbjct: 73  QAPEKKRRL---TAEQVQLLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARW 129

Query: 146 KTQHERHENTQLRTENEKLRADN 168
           KT+    +  +L+   + L AD+
Sbjct: 130 KTKQLETDYDRLKAAYDALAADH 152


>gi|195346236|ref|XP_002039672.1| GM15784 [Drosophila sechellia]
 gi|194135021|gb|EDW56537.1| GM15784 [Drosophila sechellia]
          Length = 895

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 7/100 (7%)

Query: 64  EEFDSTKSGSENHEGASG-DDQEQRPNKKKRYHRH-----TQHQIQEMEAFFKECPHPDD 117
           E+ + T S  +  +  SG DD+ Q  N  K+ HR      T +Q+ E+E  F++  +PD 
Sbjct: 518 EDLNQTNSSEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 577

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
             R+EL+ ++ L  ++V+ WFQN+R + + Q E+ E+ +L
Sbjct: 578 YSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKSESLRL 616


>gi|2394304|gb|AAB70267.1| retinal homeobox 1 [Xenopus laevis]
          Length = 322

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 83  DQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
           D EQ+P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  ++V+ WFQN
Sbjct: 121 DDEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQN 180

Query: 141 KRTQMKTQHERHENTQLRTENEKLRADN 168
           +R + + Q E+ E T ++ ++  + + N
Sbjct: 181 RRAKWRRQ-EKLEVTSMKLQDSPMLSFN 207


>gi|148237828|ref|NP_001081687.1| retinal homeobox protein Rx-A [Xenopus laevis]
 gi|292495033|sp|O42201.2|RXA_XENLA RecName: Full=Retinal homeobox protein Rx-A; Short=Rx1A;
           Short=Xrx1; AltName: Full=Retina and anterior neural
           fold homeobox protein A
 gi|2232059|gb|AAB62322.1| retinal homeobox 1A [Xenopus laevis]
 gi|213625316|gb|AAI70331.1| Retinal homeobox 1A [Xenopus laevis]
 gi|213626887|gb|AAI70333.1| Retinal homeobox 1A [Xenopus laevis]
          Length = 322

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 83  DQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
           D EQ+P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  ++V+ WFQN
Sbjct: 121 DDEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQN 180

Query: 141 KRTQMKTQHERHENTQLRTENEKLRADN 168
           +R + + Q E+ E T ++ ++  + + N
Sbjct: 181 RRAKWRRQ-EKLEVTSMKLQDSPMLSFN 207


>gi|17986113|ref|NP_523834.1| putative homeodomain protein [Drosophila melanogaster]
 gi|7291665|gb|AAF47087.1| putative homeodomain protein [Drosophila melanogaster]
 gi|113204973|gb|ABI34220.1| RT01102p [Drosophila melanogaster]
          Length = 220

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 9/121 (7%)

Query: 72  GSEN---HEGASGDDQEQRPNKKKRYH---RHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
           GS N   H  + GDD     +K K+       T +Q+ E+E  F E  +PD   R+E++ 
Sbjct: 88  GSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIAS 147

Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGG 185
           +L L   +V+ WFQN+R + + Q ERH    ++ ++ KL  D  +   A S    P+  G
Sbjct: 148 KLHLTEARVQVWFQNRRAKFRKQ-ERHAIYIMKDKSSKL--DGRKNPVAGSKYLGPSLKG 204

Query: 186 P 186
           P
Sbjct: 205 P 205


>gi|28573580|ref|NP_726006.2| retinal homeobox [Drosophila melanogaster]
 gi|17380504|sp|Q9W2Q1.2|RX_DROME RecName: Full=Retinal homeobox protein Rx; Short=DRx; Short=DRx1
 gi|21392130|gb|AAM48419.1| RE39020p [Drosophila melanogaster]
 gi|28380638|gb|AAF46639.3| retinal homeobox [Drosophila melanogaster]
 gi|220960168|gb|ACL92620.1| Rx-PA [synthetic construct]
          Length = 873

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 7/100 (7%)

Query: 64  EEFDSTKSGSENHEGASG-DDQEQRPNKKKRYHRH-----TQHQIQEMEAFFKECPHPDD 117
           E+ + T S  +  +  SG DD+ Q  N  K+ HR      T +Q+ E+E  F++  +PD 
Sbjct: 496 EDLNQTNSSEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 555

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
             R+EL+ ++ L  ++V+ WFQN+R + + Q E+ E+ +L
Sbjct: 556 YSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKSESLRL 594


>gi|109131769|ref|XP_001092145.1| PREDICTED: homeobox protein ESX1 [Macaca mulatta]
 gi|355705037|gb|EHH30962.1| hypothetical protein EGK_20785 [Macaca mulatta]
          Length = 361

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)

Query: 62  REEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR-HTQHQIQEMEAFFKECPHPDDKQR 120
           +EE   +T  G +  EG    +  Q P +K+R     TQ Q+QE+E FF E  +PD   R
Sbjct: 110 QEEPPQATVEGPQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDEAQYPDVVAR 169

Query: 121 KELSRELGLEPLQVKFWFQNKRTQMK 146
           + L+  L L   +V+ WFQN+R + K
Sbjct: 170 ERLAARLNLTEDRVQVWFQNRRAKWK 195


>gi|9156|emb|CAA39854.1| Dth-1 protein [Girardia tigrina]
          Length = 451

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 11/163 (6%)

Query: 55  ESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPH 114
           +SEI         S+   ++N   +SGD  +    K+KR    ++ QI E+E  F++  +
Sbjct: 264 DSEIHENPNPHDTSSVENNDNENSSSGDIGK----KRKRRVLFSKKQILELERHFRQKKY 319

Query: 115 PDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREA 174
               +R+ L+  +GL P QVK WFQN R +MK  H  HE   L   N    A N R  ++
Sbjct: 320 LSAPEREHLANLIGLSPTQVKIWFQNHRYKMKRAH--HEKA-LEMGN---LAVNRRLNQS 373

Query: 175 LSNASCPNCGGPTAIG-EMSFDEHHLRLENARLREEIDRISAI 216
           + N S  +  G   +G   SF   +L L N  L   ++ +  I
Sbjct: 374 MFNDSKSHLPGNFELGINNSFYNSNLALGNLSLNPAVNLMGRI 416


>gi|402072464|gb|EJT68253.1| hypothetical protein GGTG_14167 [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 837

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 2/58 (3%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL-GLEPLQVKFWFQNKRTQMK 146
           K KR+ R T  Q + + + F + PHPD   R+ LSRE+ GL P QV+ WFQN+R ++K
Sbjct: 257 KMKRF-RLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLSPRQVQVWFQNRRAKIK 313


>gi|326516528|dbj|BAJ92419.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 289

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 3/76 (3%)

Query: 89  NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           ++KKR+   ++ QI+ +E+ F      + +Q+ +L+RELGL+P QV  WFQNKR + K++
Sbjct: 64  DRKKRF---SEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 120

Query: 149 HERHENTQLRTENEKL 164
               +   LR + + L
Sbjct: 121 QLERQYAALRDDYDAL 136


>gi|2240022|gb|AAB62323.1| retinal homeobox 2A [Xenopus laevis]
          Length = 325

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 83  DQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
           D EQ+P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  ++V+ WFQN
Sbjct: 121 DDEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQN 180

Query: 141 KRTQMKTQHERHENTQLRTENEKLRADN 168
           +R + + Q E+ E T ++ ++  + + N
Sbjct: 181 RRAKWRRQ-EKLEVTSMKLQDSPMLSFN 207


>gi|148230627|ref|NP_001081689.1| retinal homeobox protein Rx-B [Xenopus laevis]
 gi|292495034|sp|O42567.2|RXB_XENLA RecName: Full=Retinal homeobox protein Rx-B; AltName: Full=Retina
           and anterior neural fold homeobox protein B; AltName:
           Full=Rx2A; Short=Xrx2
 gi|114107824|gb|AAI23154.1| Rx2A protein [Xenopus laevis]
          Length = 325

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 83  DQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
           D EQ+P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  ++V+ WFQN
Sbjct: 121 DDEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQN 180

Query: 141 KRTQMKTQHERHENTQLRTENEKLRADN 168
           +R + + Q E+ E T ++ ++  + + N
Sbjct: 181 RRAKWRRQ-EKLEVTSMKLQDSPMLSFN 207


>gi|297821072|ref|XP_002878419.1| ATHB-12 [Arabidopsis lyrata subsp. lyrata]
 gi|297324257|gb|EFH54678.1| ATHB-12 [Arabidopsis lyrata subsp. lyrata]
          Length = 236

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 41/69 (59%)

Query: 96  RHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENT 155
           R ++ QI+ +E  F+     + +++ +++RELGL+P QV  WFQNKR + KT+    E  
Sbjct: 34  RFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEYN 93

Query: 156 QLRTENEKL 164
            LR+    L
Sbjct: 94  ILRSNYNNL 102


>gi|168026055|ref|XP_001765548.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683186|gb|EDQ69598.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 166

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 71  SGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLE 130
           SG +  E   GDD  Q+  KK+R    T  Q++ +E  F+     + +++ +L++ELGL+
Sbjct: 61  SGEDPAEEEIGDDFTQQVEKKRRL---TFDQVRSLEYNFEIENKLEPERKMQLAKELGLQ 117

Query: 131 PLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRAD 167
           P QV  WFQN+R + KT+    +   L  +  +L+ +
Sbjct: 118 PRQVAVWFQNRRARWKTKQLERDYEVLNLDYNRLKKE 154


>gi|358392262|gb|EHK41666.1| hypothetical protein TRIATDRAFT_287108 [Trichoderma atroviride IMI
           206040]
          Length = 842

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 2/58 (3%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL-GLEPLQVKFWFQNKRTQMK 146
           K KR+ R T  Q + + + F + PHPD   R+ LSRE+ GL P QV+ WFQN+R ++K
Sbjct: 378 KMKRF-RLTHQQTRFLTSEFAKQPHPDAAHRERLSREIPGLSPRQVQVWFQNRRAKIK 434


>gi|187609453|sp|A2X7U1.2|HOX24_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX24; AltName:
           Full=HD-ZIP protein HOX24; AltName: Full=Homeodomain
           transcription factor HOX24; AltName: Full=OsHox24
 gi|218191271|gb|EEC73698.1| hypothetical protein OsI_08284 [Oryza sativa Indica Group]
          Length = 262

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 92  KRYHRHTQHQIQEMEA-FFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           +R  R T+ Q++ +E  F       + +++ EL+RELGL+P QV  WFQNKR + +++  
Sbjct: 64  ERKRRFTEEQVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQI 123

Query: 151 RHENTQLRTENEKLRA 166
            H+   LR + + L A
Sbjct: 124 EHDYAALRAQYDALHA 139


>gi|297603099|ref|NP_001053446.2| Os04g0541700 [Oryza sativa Japonica Group]
 gi|218195301|gb|EEC77728.1| hypothetical protein OsI_16826 [Oryza sativa Indica Group]
 gi|222629292|gb|EEE61424.1| hypothetical protein OsJ_15634 [Oryza sativa Japonica Group]
 gi|255675648|dbj|BAF15360.2| Os04g0541700 [Oryza sativa Japonica Group]
          Length = 262

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 92  KRYHRHTQHQIQEMEAFFK-ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           +R  R T+ QI+ +E+ F       + +++ EL+RELGL+P QV  WFQNKR + +++  
Sbjct: 58  ERKRRFTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQL 117

Query: 151 RHENTQLRTENEKLRA 166
            H+   LR++ + L +
Sbjct: 118 EHDYAALRSKYDALHS 133


>gi|113204913|gb|ABI34190.1| RT01002p [Drosophila melanogaster]
          Length = 220

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 9/121 (7%)

Query: 72  GSEN---HEGASGDDQEQRPNKKKRYH---RHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
           GS N   H  + GDD     +K K+       T +Q+ E+E  F E  +PD   R+E++ 
Sbjct: 88  GSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIAS 147

Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGG 185
           +L L   +V+ WFQN+R + + Q ERH    ++ ++ KL  D  +   A S    P+  G
Sbjct: 148 KLHLTEARVQVWFQNRRAKFRKQ-ERHAIYIMKDKSSKL--DGRKNPVAGSKYLGPSLKG 204

Query: 186 P 186
           P
Sbjct: 205 P 205


>gi|226532120|ref|NP_001149510.1| homeodomain-leucine zipper transcription factor TaHDZipI-1 [Zea
           mays]
 gi|195627676|gb|ACG35668.1| homeodomain-leucine zipper transcription factor TaHDZipI-1 [Zea
           mays]
          Length = 244

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/73 (35%), Positives = 41/73 (56%)

Query: 92  KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
           K   R +  Q + +E+ F      + +Q+ +L+RELGL+P QV  WFQNKR + K++   
Sbjct: 28  KNKKRFSDEQTKSLESMFATQAKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLE 87

Query: 152 HENTQLRTENEKL 164
            E + LR +   L
Sbjct: 88  REYSALRDDYHAL 100


>gi|18996777|gb|AAL83210.1|AF465939_1 paired-like homeodomain transcription factor Shox [Branchiostoma
           floridae]
          Length = 286

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 48/85 (56%)

Query: 64  EEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKEL 123
           E  D +K G +  +  S + ++ +  +++     T  Q+QE+E  F E  +PD   R+EL
Sbjct: 78  ENKDPSKPGEKKDDLESPNSKDGKLKQRRSRTNFTLEQLQELERLFDETHYPDAFMREEL 137

Query: 124 SRELGLEPLQVKFWFQNKRTQMKTQ 148
           S+ LGL   +V+ WFQN+R + + Q
Sbjct: 138 SQRLGLSEARVQVWFQNRRAKCRKQ 162


>gi|13447045|gb|AAA63768.2| homeobox-leucine zipper protein HAHB-4 [Helianthus annuus]
          Length = 181

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/78 (34%), Positives = 41/78 (52%)

Query: 87  RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           R N+ +   R T  QI  +E  F+    P+ + + +L+ +LGL P QV  WFQNKR + K
Sbjct: 14  RKNRNEGRKRFTDKQISFLEYMFETQSRPELRMKHQLAHKLGLHPRQVAIWFQNKRARSK 73

Query: 147 TQHERHENTQLRTENEKL 164
           ++    E   L+   E L
Sbjct: 74  SRQIEQEYNALKHNYETL 91


>gi|194859821|ref|XP_001969458.1| GG23943 [Drosophila erecta]
 gi|190661325|gb|EDV58517.1| GG23943 [Drosophila erecta]
          Length = 419

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 10/127 (7%)

Query: 34  SQPTNMMEGQLHPLDMTQNTSESEIARLREE-----EFDSTKSGSENHEGASGDDQEQRP 88
           SQP +     + P ++T++T +S   +L  +     E   +   S N E     D     
Sbjct: 130 SQPEDSKTSGVVPANITESTEDSNTPKLAPDKPLLPEECVSPEPSRNREHCDPLDSSLVN 189

Query: 89  NKKKRYHRH-TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
            K++R   + T  Q+ E+E  F+E  +PD   R+ELS+ LGL   +V+ WFQN+R + + 
Sbjct: 190 TKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR- 248

Query: 148 QHERHEN 154
              +HEN
Sbjct: 249 ---KHEN 252


>gi|449296679|gb|EMC92698.1| hypothetical protein BAUCODRAFT_27052 [Baudoinia compniacensis UAMH
           10762]
          Length = 593

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 13/82 (15%)

Query: 77  EGASGDDQEQRP-----------NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
           + A  DD E RP            K KR+ R T +Q + + + F   PHPD   R+ LSR
Sbjct: 164 DPAEQDDGEIRPPMTAAELRAHKRKMKRF-RLTHNQTRFLMSEFARQPHPDAAHRERLSR 222

Query: 126 EL-GLEPLQVKFWFQNKRTQMK 146
           E+ GL P QV+ WFQN+R ++K
Sbjct: 223 EIPGLSPRQVQVWFQNRRAKLK 244


>gi|401825783|ref|XP_003886986.1| homeodomain-containing transcription factor [Encephalitozoon hellem
           ATCC 50504]
 gi|392998143|gb|AFM98005.1| homeodomain-containing transcription factor [Encephalitozoon hellem
           ATCC 50504]
          Length = 228

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 2/98 (2%)

Query: 66  FDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
           F ++ + + N E   G  Q   P   K   R T+ Q++ +E  F+    PD   RK+L  
Sbjct: 8   FFNSYTNNSNREAEGG--QYFDPYFVKHRKRTTKAQLKVLEETFETNIRPDANMRKKLGE 65

Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEK 163
           +LG+ P  V+ WFQN+R ++K   ++    Q  T+N K
Sbjct: 66  QLGMTPRSVQVWFQNRRAKIKKLTQKKMMQQENTDNTK 103


>gi|443915949|gb|ELU37220.1| Homeobox domain-containing protein [Rhizoctonia solani AG-1 IA]
          Length = 208

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 87  RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           RP+ K R  R T HQ++ +E  F    HP    R+EL+RELG+E   V  WFQNKR  +K
Sbjct: 65  RPSVKSR-KRVTPHQLKHLERVFASETHPSRGSREELARELGMELKSVTIWFQNKRQSIK 123


>gi|194704070|gb|ACF86119.1| unknown [Zea mays]
 gi|414590027|tpg|DAA40598.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 244

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/73 (35%), Positives = 41/73 (56%)

Query: 92  KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
           K   R +  Q + +E+ F      + +Q+ +L+RELGL+P QV  WFQNKR + K++   
Sbjct: 28  KNKKRFSDEQTKSLESMFATQAKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLE 87

Query: 152 HENTQLRTENEKL 164
            E + LR +   L
Sbjct: 88  REYSALRDDYHAL 100


>gi|115447605|ref|NP_001047582.1| Os02g0649300 [Oryza sativa Japonica Group]
 gi|75123340|sp|Q6H6S3.1|HOX24_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX24; AltName:
           Full=HD-ZIP protein HOX24; AltName: Full=Homeodomain
           transcription factor HOX24; AltName: Full=OsHox24
 gi|49388446|dbj|BAD25576.1| putative homeodomain leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|113537113|dbj|BAF09496.1| Os02g0649300 [Oryza sativa Japonica Group]
 gi|215686572|dbj|BAG88825.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|217030933|gb|ACJ74067.1| homeobox leucine zipper protein [Oryza sativa Japonica Group]
 gi|222623346|gb|EEE57478.1| hypothetical protein OsJ_07726 [Oryza sativa Japonica Group]
          Length = 261

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 92  KRYHRHTQHQIQEMEA-FFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           +R  R T+ Q++ +E  F       + +++ EL+RELGL+P QV  WFQNKR + +++  
Sbjct: 63  ERKRRFTEEQVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQI 122

Query: 151 RHENTQLRTENEKLRA 166
            H+   LR + + L A
Sbjct: 123 EHDYAALRAQYDALHA 138


>gi|302781508|ref|XP_002972528.1| hypothetical protein SELMODRAFT_97273 [Selaginella moellendorffii]
 gi|300159995|gb|EFJ26614.1| hypothetical protein SELMODRAFT_97273 [Selaginella moellendorffii]
          Length = 97

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 2/90 (2%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +KKR  R +  Q++ +E  F+     + +++K+L+ ELGL+P QV  WFQN+R + KT+ 
Sbjct: 1   EKKR--RLSVDQVRSLELNFEMENKLEPERKKQLAHELGLQPRQVAVWFQNRRARWKTKQ 58

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNAS 179
              +   L+   +KL  +N + +  +S+ S
Sbjct: 59  LERDYESLKASYDKLLLENKKLQAEVSSVS 88


>gi|1076569|pir||S51929 homeotic protein CHB5 - carrot
          Length = 96

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 2/83 (2%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +KKR  R    Q++ +E  F+     + +++ +L+R LGL+P Q+  WFQN+R + KT+ 
Sbjct: 3   EKKR--RLNLEQVKALEKSFELGNKLEPERKVQLARALGLQPRQIAIWFQNRRARWKTKQ 60

Query: 150 ERHENTQLRTENEKLRADNMRYR 172
              + T L+ + + L+ADN   R
Sbjct: 61  LERDYTILKRQFDALKADNDSLR 83


>gi|391868577|gb|EIT77790.1| hypothetical protein Ao3042_06037 [Aspergillus oryzae 3.042]
          Length = 563

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 12/95 (12%)

Query: 62  REEEFDSTKSGSENHEGASGDDQEQRP---------NKKKRYHRHTQHQIQEMEAFFKEC 112
           +EE+ D  K   E   GAS DD    P          KK +  R T +Q + + + F   
Sbjct: 153 QEEQHDHEKDNVE--AGASSDDGIGSPRTALDPKTEKKKMKRFRLTHNQTRFLMSEFTRQ 210

Query: 113 PHPDDKQRKELSREL-GLEPLQVKFWFQNKRTQMK 146
            HPD   R+ LSRE+ GL P QV+ WFQN+R ++K
Sbjct: 211 AHPDAAHRERLSREIPGLTPRQVQVWFQNRRAKLK 245


>gi|388856268|emb|CCF50077.1| uncharacterized protein [Ustilago hordei]
          Length = 997

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 41/65 (63%)

Query: 87  RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           RP  +K+ ++ T  Q++ +EAFF++  +P  + R ELSR L +    V+ WFQN+R ++K
Sbjct: 236 RPRGRKKRNKCTPDQLRSLEAFFEKNRNPTGRIRHELSRRLRMPERSVQVWFQNRRAKVK 295

Query: 147 TQHER 151
           T   R
Sbjct: 296 TVERR 300


>gi|70778522|gb|AAZ08039.1| hbox10 [Xenopus (Silurana) tropicalis]
          Length = 569

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 6/116 (5%)

Query: 60  RLREEEFDSTKSGSENHEGASGDDQEQR--PNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           RL    +D+   G         D  E+   P +KK    ++  Q+QE+E  F E  +PD 
Sbjct: 144 RLPTFIYDTGHGGDRQRGKCPADAPEEPGPPCRKKSRTLYSMDQLQELERLFAEDHYPDS 203

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYRE 173
           ++R+E++  +G+ P ++  WFQN+R + +    + E T ++   + L A  M   E
Sbjct: 204 EKRREIAEIIGVTPQRIMVWFQNRRAKWR----KVEKTSIKGPRKPLSAAGMSRPE 255


>gi|389627356|ref|XP_003711331.1| hypothetical protein MGG_07437 [Magnaporthe oryzae 70-15]
 gi|351643663|gb|EHA51524.1| hypothetical protein MGG_07437 [Magnaporthe oryzae 70-15]
 gi|440469023|gb|ELQ38150.1| hypothetical protein OOU_Y34scaffold00552g105 [Magnaporthe oryzae
           Y34]
 gi|440483170|gb|ELQ63598.1| hypothetical protein OOW_P131scaffold00967g4 [Magnaporthe oryzae
           P131]
          Length = 714

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 2/58 (3%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL-GLEPLQVKFWFQNKRTQMK 146
           K KR+ R T  Q + + + F + PHPD   R+ LSRE+ GL P QV+ WFQN+R ++K
Sbjct: 224 KMKRF-RLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLSPRQVQVWFQNRRAKIK 280


>gi|392597820|gb|EIW87142.1| hypothetical protein CONPUDRAFT_69445 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 715

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 13/124 (10%)

Query: 26  GSSSGL-TLSQPTNMMEGQLHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQ 84
           GSS G+ T + P         P+DM  +T E+++            SG+ +    +    
Sbjct: 24  GSSHGMSTFNAPGGRSSQHNPPVDMAPSTDEAKM------------SGASDKSPTTVGGS 71

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           ++  + KK  HRH+  Q+  +   F +  HP  + R EL+  LG+E   V  WFQNKR  
Sbjct: 72  DKASSSKKPRHRHSPAQLAALNELFDQNEHPSLEDRTELAERLGMETKTVNAWFQNKRAS 131

Query: 145 MKTQ 148
            K +
Sbjct: 132 TKKR 135



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           +++P  +    R    Q +E+   +   PHP  ++R+ L+ + GL    +  WFQN+R+Q
Sbjct: 298 DKKPRGEHSRTRTLPEQAEELRKAYAANPHPSREERELLAEKTGLRYQSITNWFQNQRSQ 357

Query: 145 MKTQHERHENTQLRT 159
            K +  RH++T L +
Sbjct: 358 AKIR--RHKDTPLES 370


>gi|328792160|ref|XP_001121029.2| PREDICTED: segmentation polarity homeobox protein engrailed [Apis
           mellifera]
          Length = 349

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 5/78 (6%)

Query: 69  TKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELG 128
           T+    +H G +G  +E+RP         +  Q+  ++  F E  +  +++R++LSR+LG
Sbjct: 236 TRRVKRSHNGKNGSPEEKRPRTA-----FSAEQLARLKREFAENRYLTERRRQQLSRDLG 290

Query: 129 LEPLQVKFWFQNKRTQMK 146
           L   Q+K WFQNKR ++K
Sbjct: 291 LNEAQIKIWFQNKRAKIK 308


>gi|83775309|dbj|BAE65431.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 565

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 12/95 (12%)

Query: 62  REEEFDSTKSGSENHEGASGDDQEQRP---------NKKKRYHRHTQHQIQEMEAFFKEC 112
           +EE+ D  K   E   GAS DD    P          KK +  R T +Q + + + F   
Sbjct: 137 QEEQHDHEKDNVE--AGASSDDGIGSPRTALDPKTEKKKMKRFRLTHNQTRFLMSEFTRQ 194

Query: 113 PHPDDKQRKELSREL-GLEPLQVKFWFQNKRTQMK 146
            HPD   R+ LSRE+ GL P QV+ WFQN+R ++K
Sbjct: 195 AHPDAAHRERLSREIPGLTPRQVQVWFQNRRAKLK 229


>gi|410915108|ref|XP_003971029.1| PREDICTED: pituitary homeobox 1-like isoform 1 [Takifugu rubripes]
          Length = 315

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 61/109 (55%), Gaps = 6/109 (5%)

Query: 49  MTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAF 108
           +  ++SES    L E+E    +S  +  +  + DD +++  +++R H  T  Q+QE+EA 
Sbjct: 52  LENSSSESSDTDLAEKE----RSAEQRSDDGNADDPKKKKQRRQRTH-FTSQQLQELEAT 106

Query: 109 FKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           F+   +PD   R+E++    L   +V+ WF+N+R + + + ER++   L
Sbjct: 107 FQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQMDL 154


>gi|396081108|gb|AFN82727.1| Homeodomain-containing transcription factor-like protein
           [Encephalitozoon romaleae SJ-2008]
          Length = 227

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 2/98 (2%)

Query: 66  FDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
           F ++ + + N E   G  Q   P   K   R T+ Q++ +E  F+    PD   RK+L  
Sbjct: 8   FFNSYTNNSNREAEGG--QYFDPYFVKHRKRTTKAQLKVLEETFETNIRPDANMRKKLGE 65

Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEK 163
           +LG+ P  V+ WFQN+R ++K   ++    Q  T+N K
Sbjct: 66  QLGMTPRSVQVWFQNRRAKIKKLTQKKMMQQENTDNTK 103


>gi|380030805|ref|XP_003699032.1| PREDICTED: segmentation polarity homeobox protein engrailed-like
           [Apis florea]
          Length = 351

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 5/78 (6%)

Query: 69  TKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELG 128
           T+    +H G +G  +E+RP         +  Q+  ++  F E  +  +++R++LSR+LG
Sbjct: 238 TRRVKRSHNGKNGSPEEKRPRTA-----FSAEQLARLKREFAENRYLTERRRQQLSRDLG 292

Query: 129 LEPLQVKFWFQNKRTQMK 146
           L   Q+K WFQNKR ++K
Sbjct: 293 LNEAQIKIWFQNKRAKIK 310


>gi|112820188|gb|ABI23975.1| visual system homeobox 1 transcript variant 3 [Homo sapiens]
          Length = 280

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 5/104 (4%)

Query: 62  REEEFDSTKSGSENHEGASGDDQEQRP---NKKKRYHR--HTQHQIQEMEAFFKECPHPD 116
           R++  DS  +  E+ +    +D +  P    +KKR HR   T HQ++E+E  F E  +PD
Sbjct: 131 RQKRSDSVSTSDEDSQSEDRNDLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPD 190

Query: 117 DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTE 160
              R+ L+ +  L   +++ WFQN+R + + + +R   + +  E
Sbjct: 191 VYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAE 234


>gi|357452771|ref|XP_003596662.1| Homeobox-leucine zipper protein ROC2 [Medicago truncatula]
 gi|355485710|gb|AES66913.1| Homeobox-leucine zipper protein ROC2 [Medicago truncatula]
          Length = 172

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 33/53 (62%)

Query: 331 GFKCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAG 383
           GF  EASR+  ++ +    LVE+LMDVNQWST F  IV RA  L   S GV G
Sbjct: 78  GFPIEASRDMELIKIRPTKLVELLMDVNQWSTEFYNIVPRARILGSFSDGVEG 130


>gi|449275732|gb|EMC84500.1| Short stature homeobox protein, partial [Columba livia]
          Length = 211

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 9/135 (6%)

Query: 23  GGLGSSSGL--TLSQPTNMMEGQLH-PLDMTQNTSESEIARLREEEFDSTKSG----SEN 75
            GL  S  L  + S   +M E   H P+ + ++  ES+  +L+E     T  G     E 
Sbjct: 40  SGLARSRELGNSDSNLQDMTESSNHCPVHLFKDHVESDKDKLKEFSTGRTAEGIYECKEK 99

Query: 76  HEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
            +    +D++ +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL   +
Sbjct: 100 RDDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEAR 159

Query: 134 VKFWFQNKRTQMKTQ 148
           V+ WFQN+R + + Q
Sbjct: 160 VQVWFQNRRAKCRKQ 174


>gi|225446465|ref|XP_002275340.1| PREDICTED: homeobox-leucine zipper protein HAT5 [Vitis vinifera]
 gi|147819363|emb|CAN60172.1| hypothetical protein VITISV_003668 [Vitis vinifera]
          Length = 168

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 7/90 (7%)

Query: 96  RHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE-- 153
           R TQ Q+  +E  F   P  + + ++EL+ +LGL P QV  W+QNKR + KT+   HE  
Sbjct: 15  RLTQDQLHLLETSFITNPKLEGESKQELASKLGLPPKQVAIWYQNKRARCKTEAIEHEYK 74

Query: 154 NTQLRTE-----NEKLRADNMRYREALSNA 178
            TQL+ +     N++L+++  R    L+ A
Sbjct: 75  ATQLQLQNVLAHNQRLQSEVGRLTHKLNQA 104


>gi|21741304|emb|CAD41267.1| OSJNBb0103I08.6 [Oryza sativa Japonica Group]
 gi|116310434|emb|CAH67440.1| H0501D11.4 [Oryza sativa Indica Group]
          Length = 229

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 3/77 (3%)

Query: 92  KRYHRHTQHQIQEMEAFFKECPHP--DDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +R  R T+ QI+ +E+ F    H   + +++ EL+RELGL+P QV  WFQNKR + +++ 
Sbjct: 25  ERKRRFTEEQIRSLESMFH-AHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQ 83

Query: 150 ERHENTQLRTENEKLRA 166
             H+   LR++ + L +
Sbjct: 84  LEHDYAALRSKYDALHS 100


>gi|71021689|ref|XP_761075.1| hypothetical protein UM04928.1 [Ustilago maydis 521]
 gi|46100639|gb|EAK85872.1| hypothetical protein UM04928.1 [Ustilago maydis 521]
          Length = 1084

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 41/65 (63%)

Query: 87  RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           RP  +K+ ++ T  Q+  +EAFF++  +P  + R ELSR+L +    V+ WFQN+R ++K
Sbjct: 245 RPRGRKKRNKCTPEQLHSLEAFFEKNRNPTGRIRLELSRKLRMPERSVQVWFQNRRAKVK 304

Query: 147 TQHER 151
           T   R
Sbjct: 305 TVERR 309


>gi|1435019|dbj|BAA05622.1| DNA-binding protein [Daucus carota]
          Length = 206

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 16/107 (14%)

Query: 88  PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
           P +KKR  R T  Q++ +E  F+     +  ++ +L+++LGL+P QV  WFQN+R + KT
Sbjct: 86  PPEKKR--RLTVDQVKYLEKSFEVENKLEPDRKVQLAKDLGLQPRQVAIWFQNRRARYKT 143

Query: 148 QH--------------ERHENTQLRTENEKLRADNMRYREALSNASC 180
           +                R ++ +L  ENEKLR + +   ++L   SC
Sbjct: 144 KQLEKDYDSLKECYDKLRDDHDRLSKENEKLRLEVILDYKSLQFCSC 190


>gi|317157830|ref|XP_001826564.2| homeobox transcription factor [Aspergillus oryzae RIB40]
          Length = 516

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 12/95 (12%)

Query: 62  REEEFDSTKSGSENHEGASGDDQEQRP---------NKKKRYHRHTQHQIQEMEAFFKEC 112
           +EE+ D  K   E   GAS DD    P          KK +  R T +Q + + + F   
Sbjct: 88  QEEQHDHEKDNVE--AGASSDDGIGSPRTALDPKTEKKKMKRFRLTHNQTRFLMSEFTRQ 145

Query: 113 PHPDDKQRKELSREL-GLEPLQVKFWFQNKRTQMK 146
            HPD   R+ LSRE+ GL P QV+ WFQN+R ++K
Sbjct: 146 AHPDAAHRERLSREIPGLTPRQVQVWFQNRRAKLK 180


>gi|56718241|gb|AAW24456.1| homeodomain protein NK2b [Oikopleura dioica]
          Length = 246

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 11/134 (8%)

Query: 68  STKSGSENHE------GASGDDQEQRPNKKK-RYHRHTQHQIQEMEAFFKECPHPDDKQR 120
           S +S +EN E       A  +D++  P+KKK R    T+ Q  E+E  F++  +    +R
Sbjct: 75  SVESWAENAEQLLQDAKAEDEDEDGPPSKKKKRRILFTKAQTYELERRFRQQRYLSAPER 134

Query: 121 KELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASC 180
           ++L+  + L P QVK WFQN R ++K      +   + T        N+  R   SN   
Sbjct: 135 EQLAHSINLTPTQVKIWFQNHRYKLKKSRTNDDQFSVNTALPNF-LPNIPLR---SNFIS 190

Query: 181 PNCGGPTAIGEMSF 194
           P+ G  +A+G+  F
Sbjct: 191 PDVGSQSALGQAGF 204


>gi|313220739|emb|CBY31581.1| unnamed protein product [Oikopleura dioica]
          Length = 416

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%)

Query: 91  KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           +K+   +T+ QIQE+E  F+       +QR+E+SR L L   QVK WFQN+R + K   +
Sbjct: 245 RKKRRPYTKLQIQELETEFRRTEFVTREQRQEISRRLNLTDRQVKIWFQNRRMKEKRLRQ 304

Query: 151 RHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMS 193
           R  + + R  ++   A+ M    + S     N   P  IG+ S
Sbjct: 305 RGHSPRTRDRHQMDAAEQMESGASPSTMDGDNY--PDEIGQSS 345


>gi|226496749|ref|NP_001148520.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
 gi|195619978|gb|ACG31819.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
 gi|413922242|gb|AFW62174.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 272

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 3/83 (3%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           Q P KK+R    T  Q+Q +E  F+E    + +++ EL+R LG+ P QV  WFQN+R + 
Sbjct: 73  QAPEKKRRL---TAEQVQLLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARW 129

Query: 146 KTQHERHENTQLRTENEKLRADN 168
           KT+    +  +L+   + L AD+
Sbjct: 130 KTKQLETDYDRLKAAYDALAADH 152


>gi|402592915|gb|EJW86842.1| hypothetical protein WUBG_02247 [Wuchereria bancrofti]
          Length = 184

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 62/106 (58%), Gaps = 7/106 (6%)

Query: 76  HEGASGDDQEQRPNKKKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
           H G + DD+ +R   K+R +R T  Q Q+ E+EA F++  +PD   R+EL+ ++ L   +
Sbjct: 59  HSGGAADDRSKR---KQRRNRTTFNQQQLNELEAAFRKSHYPDVFAREELATKINLPEAR 115

Query: 134 VKFWFQNKRTQM-KTQHERHENTQLRTENEKLRADNMRYREALSNA 178
           V+ WFQN+R +  KT+ + H+      ++E +   N++  E L+ A
Sbjct: 116 VQVWFQNRRAKWRKTERDDHKLNHCNGQHETV-VSNVQLSEYLTPA 160


>gi|388520429|gb|AFK48276.1| unknown [Medicago truncatula]
          Length = 218

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 49/86 (56%)

Query: 83  DQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKR 142
           D+E      ++  R +  Q++ +E  F+     + +++ +L++ LGL+P QV  WFQN+R
Sbjct: 86  DEEGYSQMGEKKKRLSLEQVKALEKSFEIGNKLEPERKMQLAKALGLQPRQVAIWFQNRR 145

Query: 143 TQMKTQHERHENTQLRTENEKLRADN 168
            + KT+    E   L+ + + L+ADN
Sbjct: 146 ARWKTKQLEKEYEVLKKQFDSLKADN 171


>gi|410896364|ref|XP_003961669.1| PREDICTED: short stature homeobox protein-like isoform 2 [Takifugu
           rubripes]
          Length = 294

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 6/117 (5%)

Query: 38  NMMEGQLHPLDMTQNTSESEIARLREEEFDSTKSG----SENHEGASGDDQEQRPNKKKR 93
           ++ EG   P+ + ++  E E  +L++        G     E  E    +D++ +   K+R
Sbjct: 49  DITEGGHCPVHLFKDHVELEKEKLKDFSVSRATEGIYECKEKKEDVKSEDEDGQGKLKQR 108

Query: 94  YHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
             R   T  Q+ E+E  F E  +PD   R+ELS+ LGL   +V+ WFQN+R + + Q
Sbjct: 109 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 165


>gi|356503487|ref|XP_003520539.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Glycine max]
          Length = 288

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 3/106 (2%)

Query: 70  KSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGL 129
           ++  ++ EGAS DD+     KK R    ++ Q   +E  FKE    + KQ+  L+++L L
Sbjct: 108 RNNRKSSEGASDDDENGSSRKKLRL---SKQQSAFLEDSFKEHTTLNPKQKLALAKQLNL 164

Query: 130 EPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREAL 175
            P QV+ WFQN+R + K +    +   L+   E L  +N R ++ L
Sbjct: 165 RPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEL 210


>gi|302909385|ref|XP_003050061.1| hypothetical protein NECHADRAFT_49051 [Nectria haematococca mpVI
           77-13-4]
 gi|256730998|gb|EEU44348.1| hypothetical protein NECHADRAFT_49051 [Nectria haematococca mpVI
           77-13-4]
          Length = 449

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 2/58 (3%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL-GLEPLQVKFWFQNKRTQMK 146
           K KR+ R T  Q + + + F + PHPD   R+ LSRE+ GL P QV+ WFQN+R ++K
Sbjct: 153 KMKRF-RLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLSPRQVQVWFQNRRAKIK 209


>gi|22531353|emb|CAD30206.1| paired superclass homeobox transcription factor [Petromyzon
           marinus]
          Length = 263

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 11/106 (10%)

Query: 56  SEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQH----QIQEMEAFFKE 111
           ++++   E E +  ++G  +  G  G+D    P+KKKR  R   H    Q+QE+EA F+ 
Sbjct: 7   TQLSSCSESETEKAQAGKADEAG--GED----PSKKKRQRRQRTHFTSQQLQELEATFQR 60

Query: 112 CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
             +PD   R+E++    L   +V+ WF+N+R + + + ER+++ +L
Sbjct: 61  NRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQHAEL 105


>gi|841336|gb|AAA91309.1| engrailed homolog, similar to Drosophila engrailed homeotic
           protein, Swiss_Prot Accession Number P02836; Method:
           conceptual translation supplied by author, partial
           [Nautilus pompilius]
          Length = 76

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/49 (44%), Positives = 34/49 (69%)

Query: 98  TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           T  Q+Q ++  F+EC +  + +R++L+REL L   Q+K WFQNKR +MK
Sbjct: 8   TSDQLQYLKKEFEECRYLTEDRRRKLARELSLSEAQIKIWFQNKRAKMK 56


>gi|359488901|ref|XP_003633842.1| PREDICTED: homeobox-leucine zipper protein HOX21-like [Vitis
           vinifera]
          Length = 242

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)

Query: 62  REEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK 121
           R   F       E H      D   +  +KKR  R    Q++ +E  F+     + +++ 
Sbjct: 3   RSMSFSGVDGCEEVHGDDDFSDDGSQAGEKKR--RLNLEQVKTLEKNFELGNKLEPERKM 60

Query: 122 ELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
           +L+R LGL+P Q+  WFQN+R + KT+    +   L+ + E ++ADN
Sbjct: 61  QLARTLGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAVKADN 107


>gi|194761770|ref|XP_001963098.1| GF14108 [Drosophila ananassae]
 gi|190616795|gb|EDV32319.1| GF14108 [Drosophila ananassae]
          Length = 387

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 6/68 (8%)

Query: 89  NKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           N K+R  R   T  Q+ E+E  F+E  +PD   R+ELS+ LGL   +V+ WFQN+R + +
Sbjct: 159 NTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR 218

Query: 147 TQHERHEN 154
               +HEN
Sbjct: 219 ----KHEN 222


>gi|198458256|ref|XP_001360971.2| GA10035 [Drosophila pseudoobscura pseudoobscura]
 gi|198136277|gb|EAL25547.2| GA10035 [Drosophila pseudoobscura pseudoobscura]
          Length = 921

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 7/100 (7%)

Query: 64  EEFDSTKSGSENHEGASG-DDQEQRPNKKKRYHRH-----TQHQIQEMEAFFKECPHPDD 117
           E+ + T S  +  +  SG DD+ Q  N  K+ HR      T +Q+ E+E  F++  +PD 
Sbjct: 529 EDLNQTNSSEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 588

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
             R+EL+ ++ L  ++V+ WFQN+R + + Q E+ E+ +L
Sbjct: 589 YSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKSESLRL 627


>gi|11056038|ref|NP_055403.2| visual system homeobox 1 isoform a [Homo sapiens]
 gi|25009572|sp|Q9NZR4.2|VSX1_HUMAN RecName: Full=Visual system homeobox 1; AltName: Full=Homeodomain
           protein RINX; AltName: Full=Retinal inner nuclear layer
           homeobox protein; AltName: Full=Transcription factor
           VSX1
 gi|9802263|gb|AAF99656.1|AF251033_1 homeodomain protein RINX, L1 isoform [Homo sapiens]
 gi|11055960|gb|AAF37425.2|AF176797_1 transcription factor VSX1 [Homo sapiens]
 gi|112820184|gb|ABI23973.1| visual system homeobox 1 transcript variant 1 [Homo sapiens]
 gi|116496989|gb|AAI26229.1| Visual system homeobox 1 [Homo sapiens]
 gi|119630509|gb|EAX10104.1| visual system homeobox 1 homolog, CHX10-like (zebrafish), isoform
           CRA_a [Homo sapiens]
 gi|223460502|gb|AAI36498.1| Visual system homeobox 1 [Homo sapiens]
          Length = 365

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 5/104 (4%)

Query: 62  REEEFDSTKSGSENHEGASGDDQEQRP---NKKKRYHR--HTQHQIQEMEAFFKECPHPD 116
           R++  DS  +  E+ +    +D +  P    +KKR HR   T HQ++E+E  F E  +PD
Sbjct: 131 RQKRSDSVSTSDEDSQSEDRNDLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPD 190

Query: 117 DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTE 160
              R+ L+ +  L   +++ WFQN+R + + + +R   + +  E
Sbjct: 191 VYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAE 234


>gi|413922241|gb|AFW62173.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 154

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 3/83 (3%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           Q P KK+R    T  Q+Q +E  F+E    + +++ EL+R LG+ P QV  WFQN+R + 
Sbjct: 59  QAPEKKRRL---TAEQVQLLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARW 115

Query: 146 KTQHERHENTQLRTENEKLRADN 168
           KT+    +  +L+   + L AD+
Sbjct: 116 KTKQLETDYDRLKAAYDALAADH 138


>gi|462297|sp|Q00400.2|DTH1_DUGTI RecName: Full=Homeobox protein DTH-1
 gi|829193|emb|CAA49141.1| Dth-1 [Girardia tigrina]
          Length = 533

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 11/163 (6%)

Query: 55  ESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPH 114
           +SEI         S+   ++N   +SGD  +    K+KR    ++ QI E+E  F++  +
Sbjct: 346 DSEIHENPNPHDTSSVENNDNENSSSGDIGK----KRKRRVLFSKKQILELERHFRQKKY 401

Query: 115 PDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREA 174
               +R+ L+  +GL P QVK WFQN R +MK  H  HE   L   N    A N R  ++
Sbjct: 402 LSAPEREHLANLIGLSPTQVKIWFQNHRYKMKRAH--HEKA-LEMGN---LAVNRRLNQS 455

Query: 175 LSNASCPNCGGPTAIG-EMSFDEHHLRLENARLREEIDRISAI 216
           + N S  +  G   +G   SF   +L L N  L   ++ +  I
Sbjct: 456 MFNDSKSHLPGNFELGINNSFYNSNLALGNLSLNPAVNLMGRI 498


>gi|195118670|ref|XP_002003859.1| GI18136 [Drosophila mojavensis]
 gi|193914434|gb|EDW13301.1| GI18136 [Drosophila mojavensis]
          Length = 459

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 11/79 (13%)

Query: 76  HEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVK 135
           H G S   +  R N        T  Q+ E+E  F+E  +PD   R+ELS+ LGL   +V+
Sbjct: 229 HSGLSSKQRRSRTN-------FTLEQLNELERLFEETHYPDAFMREELSQRLGLSEARVQ 281

Query: 136 FWFQNKRTQMKTQHERHEN 154
            WFQN+R + +    +HEN
Sbjct: 282 VWFQNRRAKCR----KHEN 296


>gi|343425808|emb|CBQ69341.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
          Length = 1016

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 42/65 (64%)

Query: 87  RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           RP  +K+ ++ T  Q++ +EAFF++  +P  + R ELSR+L +    V+ WFQN+R ++K
Sbjct: 237 RPRGRKKRNKCTPDQLRSLEAFFEKNRNPTGRIRLELSRKLRMPERSVQVWFQNRRAKVK 296

Query: 147 TQHER 151
           T   R
Sbjct: 297 TVERR 301


>gi|357141673|ref|XP_003572308.1| PREDICTED: homeobox-leucine zipper protein HOX20-like [Brachypodium
           distachyon]
          Length = 266

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 2/83 (2%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +KKR  R +  Q++ +E  F++    + +++  L+R+LGL+P QV  WFQN+R + KT+ 
Sbjct: 50  EKKR--RLSVEQVRALEVSFEKENKLEPERKARLARDLGLQPRQVAIWFQNRRARWKTKQ 107

Query: 150 ERHENTQLRTENEKLRADNMRYR 172
              +   LR   + LRAD+   R
Sbjct: 108 LERDYAALRQSFDALRADHDALR 130


>gi|340381446|ref|XP_003389232.1| PREDICTED: hypothetical protein LOC100634701 [Amphimedon
           queenslandica]
          Length = 415

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 70/138 (50%), Gaps = 10/138 (7%)

Query: 61  LREEEF-DSTKSGSENH-------EGASGDDQEQRPNKKKRYHR-HTQHQIQEMEAFFKE 111
           ++EE + +S   G E++       +  S  D++  P K KR    ++  Q+ ++E  F  
Sbjct: 206 IKEESYIESDDRGEEDYGPSDEESDSNSTTDKDAEPKKPKRTRTAYSNSQLDQLELIFAT 265

Query: 112 CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRY 171
             +PD   R++LSR LG+   +++ WFQN+R + + Q ER  +   R+   + R + +++
Sbjct: 266 THYPDVFTREDLSRRLGIREDRIQVWFQNRRARFRKQ-ERTGSISCRSRYRQKRLEKLQH 324

Query: 172 REALSNASCPNCGGPTAI 189
               S+A  P    P ++
Sbjct: 325 NFMPSSAGYPPTHYPPSV 342


>gi|195153960|ref|XP_002017891.1| GL17060 [Drosophila persimilis]
 gi|194113687|gb|EDW35730.1| GL17060 [Drosophila persimilis]
          Length = 920

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 7/100 (7%)

Query: 64  EEFDSTKSGSENHEGASG-DDQEQRPNKKKRYHRH-----TQHQIQEMEAFFKECPHPDD 117
           E+ + T S  +  +  SG DD+ Q  N  K+ HR      T +Q+ E+E  F++  +PD 
Sbjct: 528 EDLNQTNSSEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 587

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
             R+EL+ ++ L  ++V+ WFQN+R + + Q E+ E+ +L
Sbjct: 588 YSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKSESLRL 626


>gi|148283407|gb|ABQ57284.1| hox20, partial [Oryza sativa Indica Group]
          Length = 152

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 2/79 (2%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +KKR  R +  Q++ +E  F+     + +++  L+R+LGL+P QV  WFQN+R + KT+ 
Sbjct: 38  EKKR--RLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQ 95

Query: 150 ERHENTQLRTENEKLRADN 168
              +   LR   + LRAD+
Sbjct: 96  LERDYAALRQSYDALRADH 114


>gi|353236340|emb|CCA68337.1| related to homeobox protein HB1-Glomus intraradices [Piriformospora
           indica DSM 11827]
          Length = 508

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 49/100 (49%)

Query: 87  RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           RPN+ K   R T+ Q++ +E  F+    PD   RK L+ +L + P  V+ WFQN+R + K
Sbjct: 93  RPNEVKHRKRTTRQQLKVLEETFRTTQKPDGNLRKTLAVQLDMTPRNVQVWFQNRRAKDK 152

Query: 147 TQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGP 186
           T  +R + +    + + + A      E  S    PN   P
Sbjct: 153 TLAKRAQKSLEEQQPKDMAAGPADAIETSSPMDTPNVTSP 192


>gi|17380175|sp|Q9W751.1|PITX1_XENLA RecName: Full=Pituitary homeobox 1; AltName: Full=Homeobox protein
           PITX1; Short=X-PITX-1; Short=xPitx1; AltName:
           Full=Paired-like homeodomain transcription factor 1
 gi|5566001|gb|AAD45292.1|AF155206_1 homeodomain transcription factor Pitx-1 [Xenopus laevis]
          Length = 305

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 26/136 (19%)

Query: 35  QPTNMMEGQLH---------PLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQE 85
           QP++ M    H         P+D   + SES    + E+E    ++G    E  +GDD  
Sbjct: 20  QPSHDMATSFHLQRSSEARDPMD--NSASESSDTEIAEKE----RTGEPKGEDGNGDD-- 71

Query: 86  QRPNKKKRYHRHTQH----QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 141
             P+KKK+  R   H    Q+QE+EA F+   +PD   R+E++    L   +V+ WF+N+
Sbjct: 72  --PSKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEARVRVWFKNR 129

Query: 142 RTQMKTQHERHENTQL 157
           R + +   +R  N Q+
Sbjct: 130 RAKWR---KRERNQQM 142


>gi|363737425|ref|XP_003641845.1| PREDICTED: short stature homeobox protein 2-like [Gallus gallus]
          Length = 346

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 74  ENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
           E  E A G + E +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL  
Sbjct: 136 ERKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 195

Query: 132 LQVKFWFQNKRTQMKTQH 149
            +V+ WFQN+R + + Q 
Sbjct: 196 ARVQVWFQNRRAKCRKQE 213


>gi|326522983|dbj|BAJ88537.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 190

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 22/112 (19%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 148
           +Y R+T  Q++ +E  + +CP P   +R++L RE      +E  Q+K WFQN+R + K +
Sbjct: 26  KYVRYTPDQVEMLERVYADCPKPTSSRRQQLLRECPILANIEARQIKVWFQNRRCRDKLR 85

Query: 149 HERHE-----------NTQLRTENEKLRA-------DNMRYREALSNASCPN 182
            E              N  L  ENE+L+        +N + R+ L N S  N
Sbjct: 86  KESSRLESVNRKVSAMNKLLMEENERLQKQVSQLVHENAQVRQQLQNTSMAN 137


>gi|297806351|ref|XP_002871059.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316896|gb|EFH47318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 215

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 40/69 (57%)

Query: 92  KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
           K+  R T  Q+  +E  F+E    D +++ +L++ELGLEP QV  WFQN+R + K +H  
Sbjct: 78  KKNKRLTSEQLASLELRFQEDFKLDSERKLKLAKELGLEPRQVAVWFQNRRARWKVKHLE 137

Query: 152 HENTQLRTE 160
                LR E
Sbjct: 138 ESYDSLRQE 146


>gi|356570520|ref|XP_003553433.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Glycine max]
          Length = 292

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 2/106 (1%)

Query: 70  KSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGL 129
           ++  ++ EGAS +D E    +KK   R ++ Q   +E  FKE    + KQ+  L+++L L
Sbjct: 106 RNSRKSCEGASDEDDENGSTRKK--LRLSKQQSVFLEESFKEHTTLNPKQKLALAKQLNL 163

Query: 130 EPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREAL 175
            P QV+ WFQN+R + K +    +   L+   E L  +N R ++ L
Sbjct: 164 RPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEL 209


>gi|195638278|gb|ACG38607.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
          Length = 270

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 10/81 (12%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           Q P KK+R    T  Q+Q +E  F+E    + +++ EL+R LG+ P QV  WFQN+R + 
Sbjct: 73  QAPEKKRRL---TAEQVQLLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARW 129

Query: 146 KTQHERHENTQLRTENEKLRA 166
           KT+       QL T+ ++L+A
Sbjct: 130 KTK-------QLETDYDRLKA 143


>gi|55926080|ref|NP_001007500.1| paired-like homeodomain 1 [Xenopus (Silurana) tropicalis]
 gi|51258792|gb|AAH79936.1| paired-like homeodomain 1 [Xenopus (Silurana) tropicalis]
          Length = 305

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 26/136 (19%)

Query: 35  QPTNMMEGQLH---------PLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQE 85
           QP++ M    H         P+D   + SES    + E+E    +SG    E  +GDD  
Sbjct: 20  QPSHDMATSFHLQRSSEARDPMD--NSASESSDTEIAEKE----RSGEPKGEDGNGDD-- 71

Query: 86  QRPNKKKRYHRHTQH----QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 141
             P KKK+  R   H    Q+QE+EA F+   +PD   R+E++    L   +V+ WF+N+
Sbjct: 72  --PTKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEARVRVWFKNR 129

Query: 142 RTQMKTQHERHENTQL 157
           R + +   +R  N Q+
Sbjct: 130 RAKWR---KRERNQQM 142


>gi|226505158|ref|NP_001146068.1| uncharacterized protein LOC100279599 [Zea mays]
 gi|219885547|gb|ACL53148.1| unknown [Zea mays]
 gi|414870569|tpg|DAA49126.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 270

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 10/81 (12%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           Q P KK+R    T  Q+Q +E  F+E    + +++ EL+R LG+ P QV  WFQN+R + 
Sbjct: 73  QAPEKKRRL---TAEQVQLLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARW 129

Query: 146 KTQHERHENTQLRTENEKLRA 166
           KT+       QL T+ ++L+A
Sbjct: 130 KTK-------QLETDYDRLKA 143


>gi|148233752|ref|NP_001080981.1| pituitary homeobox 1 [Xenopus laevis]
 gi|6851371|gb|AAF29531.1|AF217647_1 pituitary homeobox gene 1 paired-like homeodomain transcription
           factor [Xenopus laevis]
 gi|213624932|gb|AAI69446.1| Pituitary homeobox gene 1 paired-likehomeodomain transcription
           factor [Xenopus laevis]
 gi|213625070|gb|AAI69749.1| Pitx1 protein [Xenopus laevis]
 gi|213626444|gb|AAI69444.1| Pituitary homeobox gene 1 paired-likehomeodomain transcription
           factor [Xenopus laevis]
 gi|213626626|gb|AAI69747.1| Pitx1 protein [Xenopus laevis]
          Length = 305

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 26/136 (19%)

Query: 35  QPTNMMEGQLH---------PLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQE 85
           QP++ M    H         P+D   + SES    + E+E    ++G    E  +GDD  
Sbjct: 20  QPSHDMATSFHLQRSSEARDPMD--NSASESSDTEIAEKE----RTGEPKGEDGNGDD-- 71

Query: 86  QRPNKKKRYHRHTQH----QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 141
             P+KKK+  R   H    Q+QE+EA F+   +PD   R+E++    L   +V+ WF+N+
Sbjct: 72  --PSKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEARVRVWFKNR 129

Query: 142 RTQMKTQHERHENTQL 157
           R + +   +R  N Q+
Sbjct: 130 RAKWR---KRERNQQM 142


>gi|350397864|ref|XP_003485014.1| PREDICTED: LOW QUALITY PROTEIN: protein gooseberry-like [Bombus
           impatiens]
          Length = 522

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 12/110 (10%)

Query: 48  DMTQNTSESEIARL---REEEFDSTKSGSENHEGASGDDQEQRP----NKKKRYHR--HT 98
           D T   S S I+RL   R+ E D TK G  + + +SG D E  P     +K+R  R   T
Sbjct: 166 DRTSAPSVSAISRLLRGRDPE-DETKLG--DRKTSSGSDCESEPGIPLKRKQRRSRTTFT 222

Query: 99  QHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
            HQ+ E+E  F+   +PD   R+EL++   L   +++ WF N+R +++ Q
Sbjct: 223 AHQLDELERAFERTQYPDIYTREELAQRTKLTEARIQVWFSNRRARLRKQ 272


>gi|340709854|ref|XP_003393515.1| PREDICTED: retinal homeobox protein Rx-like [Bombus terrestris]
 gi|350406119|ref|XP_003487661.1| PREDICTED: retinal homeobox protein Rx-like [Bombus impatiens]
          Length = 282

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 21/130 (16%)

Query: 63  EEEFDSTKSGSENHEGAS-GDDQEQRPNKKKRYHRH-----TQHQIQEMEAFFKECPHPD 116
           E   +ST  GS+   GA  GDD      KKK  HR      T +Q+ E+E  F++  +PD
Sbjct: 60  ENSCNSTGGGSDEELGAGCGDDLNGNGGKKK--HRRNRTTFTTYQLHELERAFEKSHYPD 117

Query: 117 DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALS 176
              R+EL+ ++ L  ++V+ WFQN+R + + Q             EK+ A  +   E   
Sbjct: 118 VYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-------------EKMEAARLGLSEYHH 164

Query: 177 NASCPNCGGP 186
            A+  N  GP
Sbjct: 165 PANMRNVAGP 174


>gi|312283295|dbj|BAJ34513.1| unnamed protein product [Thellungiella halophila]
          Length = 120

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 17/106 (16%)

Query: 75  NHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 134
           N E    DD  +   KK+R +     Q++ +E  F+     +  ++ EL+R LGL+P Q+
Sbjct: 13  NGEEEFSDDGSKMGEKKRRLN---MEQLKTLEKNFEIGNKLESDRKLELARALGLQPRQI 69

Query: 135 KFWFQNKRTQMKT-QHER-------------HENTQLRTENEKLRA 166
             WFQN+R + KT Q ER              EN  L+T+N+KL+A
Sbjct: 70  AIWFQNRRARSKTKQLERDYDALKRQFESLKDENEILQTQNQKLQA 115


>gi|405964577|gb|EKC30046.1| Short stature homeobox protein [Crassostrea gigas]
          Length = 274

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 2/87 (2%)

Query: 64  EEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRK 121
           E+ D+  +  E H  +   ++   P  K+R  R   T  Q+ E+E  F E  +PD   R+
Sbjct: 79  EDSDNESAVIERHATSGSGEERDHPKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMRE 138

Query: 122 ELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           ELS+ LGL   +V+ WFQN+R + + Q
Sbjct: 139 ELSQRLGLSEARVQVWFQNRRAKCRKQ 165


>gi|255540907|ref|XP_002511518.1| homeobox protein, putative [Ricinus communis]
 gi|223550633|gb|EEF52120.1| homeobox protein, putative [Ricinus communis]
          Length = 319

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 56/96 (58%)

Query: 72  GSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
            S +HE  + DD ++  ++ ++  R T  Q+Q +E  F+     + +++ +L+++LGL+P
Sbjct: 70  SSFDHEENADDDLDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKLQLAKDLGLQP 129

Query: 132 LQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRAD 167
            QV  WFQN+R + KT+    +   L+T    L+AD
Sbjct: 130 RQVAIWFQNRRARWKTKQMEKDYDVLQTSYNSLKAD 165


>gi|303388753|ref|XP_003072610.1| Homeodomain-containing transcription factor-like protein
           [Encephalitozoon intestinalis ATCC 50506]
 gi|303301751|gb|ADM11250.1| Homeodomain-containing transcription factor-like protein
           [Encephalitozoon intestinalis ATCC 50506]
          Length = 227

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 40/72 (55%)

Query: 92  KRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHER 151
           K   R T+ Q++ +E  F+    PD   RK+L  ELG+ P  V+ WFQN+R ++K   ++
Sbjct: 32  KHRKRTTKAQLKVLEETFETNIRPDANMRKKLGEELGMTPRSVQVWFQNRRAKIKKLTQK 91

Query: 152 HENTQLRTENEK 163
               Q  T+N K
Sbjct: 92  KMMQQENTDNTK 103


>gi|402912573|ref|XP_003918830.1| PREDICTED: short stature homeobox protein-like [Papio anubis]
          Length = 294

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 14/150 (9%)

Query: 24  GLGSSSGLTLSQPT--NMMEGQLH-PLDMTQNTSESEIARLREEEFDSTKSG------SE 74
           GL  S  L  S  +  ++ EG  H P+ + ++  ++E  +L+E  F   ++        E
Sbjct: 44  GLARSRDLGSSDSSLQDLAEGGGHCPVHLFKDHVDNEKEKLKE--FGPARAAEGIYECKE 101

Query: 75  NHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPL 132
             E    +D++ +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL   
Sbjct: 102 KREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 161

Query: 133 QVKFWFQNKRTQMKTQ-HERHENTQLRTEN 161
           +V+ WFQN+R + + Q ++ H+   L T N
Sbjct: 162 RVQVWFQNRRAKCRKQENQMHKGVILGTAN 191


>gi|157278547|ref|NP_001098374.1| Rx3 protein [Oryzias latipes]
 gi|15667414|emb|CAC69975.1| Rx3 protein [Oryzias latipes]
          Length = 292

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 55/95 (57%), Gaps = 1/95 (1%)

Query: 67  DSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE 126
           DS    S + +G   DD+ Q+   ++     T +Q+ E+E  F++  +PD   R+EL+ +
Sbjct: 80  DSCAPDSPDRDGKLSDDETQKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALK 139

Query: 127 LGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTEN 161
           + L  ++V+ WFQN+R + + Q E+ E + ++ ++
Sbjct: 140 VNLPEVRVQVWFQNRRAKWRRQ-EKLEVSSIKLQD 173


>gi|24756881|gb|AAN64145.1| Unknown protein [Oryza sativa Japonica Group]
          Length = 307

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 2/78 (2%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +KKR  R    Q++ +E  F      D  ++  ++R+LGL+P QV  WFQN+R + KT+ 
Sbjct: 41  EKKR--RLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQ 98

Query: 150 ERHENTQLRTENEKLRAD 167
              +   LR  ++ LRAD
Sbjct: 99  LERDFAALRARHDALRAD 116


>gi|403416956|emb|CCM03656.1| predicted protein [Fibroporia radiculosa]
          Length = 658

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%)

Query: 69  TKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELG 128
           T S S+     +G +QE+    KK  HRH+  Q+  +   + +  HP  ++R  L+  LG
Sbjct: 22  TPSTSKQRAMTAGANQERIEQPKKPRHRHSAFQLAALNELYDKSEHPSLEERTSLAERLG 81

Query: 129 LEPLQVKFWFQNKRTQMKTQHE 150
           +E   V  WFQNKR   K +H+
Sbjct: 82  METKTVNSWFQNKRASCKKRHK 103


>gi|126337098|ref|XP_001362463.1| PREDICTED: short stature homeobox protein-like isoform 2
           [Monodelphis domestica]
          Length = 311

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 6/109 (5%)

Query: 46  PLDMTQNTSESEIARLREEEFDSTKSG----SENHEGASGDDQEQRPNKKKRYHR--HTQ 99
           P+ + ++  ES+  +L+E        G     E  E    +D++ +   K+R  R   T 
Sbjct: 67  PVHLFKDHVESDKDKLKEFSTGRAAEGIYECKEKREDVKSEDEDGQTKLKQRRSRTNFTL 126

Query: 100 HQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
            Q+ E+E  F E  +PD   R+ELS+ LGL   +V+ WFQN+R + + Q
Sbjct: 127 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 175


>gi|431897152|gb|ELK06414.1| Pituitary homeobox 2 [Pteropus alecto]
          Length = 325

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 19/143 (13%)

Query: 27  SSSGLTLSQPTNMME----GQLHPLDMTQNTSE----SEIARLREEEFDSTKSGSENHEG 78
           SSS     QP  M      GQ   LD +++  E    S+ +     E D ++ G     G
Sbjct: 24  SSSSCHHPQPLAMASVLAPGQTRALDSSKHRLEVHTISDTSSPEAAEKDKSQQGKNEDVG 83

Query: 79  ASGDDQEQRPNKKKRYHRHTQH----QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 134
           A  DD    P+KKKR  R   H    Q+QE+EA F+   +PD   R+E++    L   +V
Sbjct: 84  A--DD----PSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARV 137

Query: 135 KFWFQNKRTQMKTQHERHENTQL 157
           + WF+N+R + + + ER++  +L
Sbjct: 138 RVWFKNRRAKWR-KRERNQQAEL 159


>gi|380023560|ref|XP_003695586.1| PREDICTED: retinal homeobox protein Rx-like [Apis florea]
          Length = 282

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 63  EEEFDSTKSGSENHEGAS-GDDQEQRPNKKKRYHRH-----TQHQIQEMEAFFKECPHPD 116
           E   +ST  GS+   GA  GDD      KKK  HR      T +Q+ E+E  F++  +PD
Sbjct: 60  ENSCNSTGGGSDEELGAGCGDDLNGNSGKKK--HRRNRTTFTTYQLHELERAFEKSHYPD 117

Query: 117 DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMR 170
              R+EL+ ++ L  ++V+ WFQN+R + + Q E+ E  +L   +E     NMR
Sbjct: 118 VYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKMEAARLGL-SEYHHPGNMR 169


>gi|110749931|ref|XP_001119966.1| PREDICTED: retinal homeobox protein Rx [Apis mellifera]
          Length = 282

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 63  EEEFDSTKSGSENHEGAS-GDDQEQRPNKKKRYHRH-----TQHQIQEMEAFFKECPHPD 116
           E   +ST  GS+   GA  GDD      KKK  HR      T +Q+ E+E  F++  +PD
Sbjct: 60  ENSCNSTGGGSDEELGAGCGDDLNGNSGKKK--HRRNRTTFTTYQLHELERAFEKSHYPD 117

Query: 117 DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMR 170
              R+EL+ ++ L  ++V+ WFQN+R + + Q E+ E  +L   +E     NMR
Sbjct: 118 VYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKMEAARLGL-SEYHHPGNMR 169


>gi|126337096|ref|XP_001362385.1| PREDICTED: short stature homeobox protein-like isoform 1
           [Monodelphis domestica]
          Length = 292

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 10/111 (9%)

Query: 46  PLDMTQNTSESEIARLREEEFDSTKSG------SENHEGASGDDQEQRPNKKKRYHR--H 97
           P+ + ++  ES+  +L+E  F + ++        E  E    +D++ +   K+R  R   
Sbjct: 67  PVHLFKDHVESDKDKLKE--FSTGRAAEGIYECKEKREDVKSEDEDGQTKLKQRRSRTNF 124

Query: 98  TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           T  Q+ E+E  F E  +PD   R+ELS+ LGL   +V+ WFQN+R + + Q
Sbjct: 125 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 175


>gi|395753638|ref|XP_003779635.1| PREDICTED: short stature homeobox protein isoform 2 [Pongo abelii]
          Length = 306

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 10/148 (6%)

Query: 24  GLGSSSGLTLSQPT--NMMEGQLH-PLDMTQNTSESEIARLREEEFDSTKSG----SENH 76
           GL  S  L  S  +  ++ EG  H P+ + ++  E++  +L+E        G     E  
Sbjct: 42  GLARSRELGTSDSSLQDITEGGGHCPVHLFKDHVENDKEKLKEFGTARVAEGIYECKEKR 101

Query: 77  EGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 134
           E    +D++ +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL   +V
Sbjct: 102 EEVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARV 161

Query: 135 KFWFQNKRTQMKTQ-HERHENTQLRTEN 161
           + WFQN+R + + Q ++ H+   L T N
Sbjct: 162 QVWFQNRRAKCRKQENQMHKGVILGTAN 189


>gi|307192281|gb|EFN75568.1| Retinal homeobox protein Rx3 [Harpegnathos saltator]
          Length = 282

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 16/142 (11%)

Query: 51  QNTSESEIARLREEEFDSTKSGSENHEGAS-GDDQEQRPNKKKRYHRH-----TQHQIQE 104
           ++TS        E   +ST  GS+   GA  GDD      KKK  HR      T +Q+ E
Sbjct: 48  EDTSRDTQENTGENSCNSTGGGSDEELGAGCGDDINGNGGKKK--HRRNRTTFTTYQLHE 105

Query: 105 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
           +E  F++  +PD   R+EL+ ++ L  ++V+ WFQN+R + + Q E+ E  +L   +E  
Sbjct: 106 LERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKMEAARLGL-SEYH 163

Query: 165 RADNMRYREALSNASCPNCGGP 186
            A NMR      N + P  G P
Sbjct: 164 HAANMR------NVAGPALGLP 179


>gi|432117247|gb|ELK37677.1| Short stature homeobox protein 2 [Myotis davidii]
          Length = 193

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)

Query: 82  DDQEQRPNKKKRYHRH-TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
           +D+ Q   K++R   + T  Q+ E+E  F E  +PD   R+ELS+ LGL   +V+ WFQN
Sbjct: 2   EDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQN 61

Query: 141 KRTQMKTQHER 151
           +R + + Q  +
Sbjct: 62  RRAKCRKQENQ 72


>gi|195456001|ref|XP_002074959.1| GK23335 [Drosophila willistoni]
 gi|194171044|gb|EDW85945.1| GK23335 [Drosophila willistoni]
          Length = 937

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 7/100 (7%)

Query: 64  EEFDSTKSGSENHEGASG-DDQEQRPNKKKRYHRH-----TQHQIQEMEAFFKECPHPDD 117
           E+ + T +  +  +  SG DD+ Q  N  K+ HR      T +Q+ E+E  F++  +PD 
Sbjct: 563 EDLNQTNNSEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 622

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
             R+EL+ ++ L  ++V+ WFQN+R + + Q E+ E+ +L
Sbjct: 623 YSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKSESLRL 661


>gi|432895659|ref|XP_004076098.1| PREDICTED: pituitary homeobox 1-like isoform 1 [Oryzias latipes]
          Length = 316

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 8/109 (7%)

Query: 49  MTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAF 108
           +  ++SES  A L E+E    +      +  + DD +++  +++R H  T  Q+QE+EA 
Sbjct: 53  LENSSSESSDAELAEKE----RGAEHRSDDGNADDPKKKKQRRQRTH-FTSQQLQELEAT 107

Query: 109 FKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           F+   +PD   R+E++    L   +V+ WF+N+R + +   +R  N Q+
Sbjct: 108 FQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR---KRERNQQM 153


>gi|311275890|ref|XP_003134961.1| PREDICTED: short stature homeobox protein-like isoform 1 [Sus
           scrofa]
          Length = 300

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 18/146 (12%)

Query: 12  MPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLH-PLDMTQNTSESEIARLREEEFDSTK 70
           + S + R+  +GG  S S L      ++ EG  H P+ + ++  +++  +L+E  F + +
Sbjct: 39  LESGLARSRELGG--SDSNLQ-----DITEGSGHCPVHLFKDHVDNDKDKLKE--FGTGR 89

Query: 71  SG------SENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKE 122
           +        +  E    +D++ +   K+R  R   T  Q+ E+E  F E  +PD   R+E
Sbjct: 90  AAEGIYDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 149

Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQ 148
           LS+ LGL   +V+ WFQN+R + + Q
Sbjct: 150 LSQRLGLSEARVQVWFQNRRAKCRKQ 175


>gi|410921502|ref|XP_003974222.1| PREDICTED: retinal homeobox protein Rx1-like [Takifugu rubripes]
          Length = 350

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 3/89 (3%)

Query: 63  EEEFDSTKSGSENHEGASGDD-QEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQ 119
           EEE    +   E+ EG S +  ++ +P KK R +R   T +Q+ E+E  F++  +PD   
Sbjct: 113 EEELSELRKSVESDEGKSPESCKDDQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 172

Query: 120 RKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           R+EL+ ++ L  ++V+ WFQN+R + + Q
Sbjct: 173 REELAMKVNLPEVRVQVWFQNRRAKWRRQ 201


>gi|324521156|gb|ADY47792.1| Homeobox protein ceh-30 [Ascaris suum]
          Length = 294

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 8/101 (7%)

Query: 52  NTS-ESEIARLREEEFDSTKSGS-ENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEA 107
           NTS E E + + EEE    +SGS E+H   +         KK R  R   T  Q+QE+EA
Sbjct: 60  NTSGERESSSVGEEE----RSGSVESHRSVTSPQSSASCGKKARKARTIFTDKQLQELEA 115

Query: 108 FFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
            F +  +   + R +L++ +GL   QVK W+QN+RT+ K Q
Sbjct: 116 TFDKQKYLSVQDRMDLAQRMGLSDTQVKTWYQNRRTKWKRQ 156


>gi|149064496|gb|EDM14699.1| retina and anterior neural fold homeobox, isoform CRA_a [Rattus
           norvegicus]
          Length = 344

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 57/92 (61%), Gaps = 7/92 (7%)

Query: 79  ASGD----DQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPL 132
           A+GD    ++E+ P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  +
Sbjct: 122 AAGDSKLSEEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEV 181

Query: 133 QVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
           +V+ WFQN+R + + Q E+ E + ++ ++  L
Sbjct: 182 RVQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPL 212


>gi|309401695|gb|ADI50265.2| homeodomain 20 transcription factor [Nicotiana attenuata]
          Length = 253

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 42/69 (60%)

Query: 96  RHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENT 155
           R +  QI+ +E  F+     + +++++L+RELGL+P QV  WFQNKR + K++    +  
Sbjct: 45  RFSDEQIKSLEPMFENETKLEPRKKQQLARELGLQPRQVAIWFQNKRARWKSKQLERDYN 104

Query: 156 QLRTENEKL 164
            L++  + L
Sbjct: 105 ILKSNFDNL 113


>gi|195473619|ref|XP_002089090.1| GE26064 [Drosophila yakuba]
 gi|194175191|gb|EDW88802.1| GE26064 [Drosophila yakuba]
          Length = 420

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 6/68 (8%)

Query: 89  NKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           N K+R  R   T  Q+ E+E  F+E  +PD   R+ELS+ LGL   +V+ WFQN+R + +
Sbjct: 189 NTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR 248

Query: 147 TQHERHEN 154
               +HEN
Sbjct: 249 ----KHEN 252


>gi|259013307|ref|NP_001158375.1| retina and anterior neural fold homeobox [Saccoglossus kowalevskii]
 gi|32307771|gb|AAP79282.1| retinal homeobox [Saccoglossus kowalevskii]
          Length = 353

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 58/105 (55%), Gaps = 5/105 (4%)

Query: 66  FDSTKSGSENHEGASGDDQEQRPNKKKRYHRH----TQHQIQEMEAFFKECPHPDDKQRK 121
           + S +    +H+ + G+D       KK++ R+    T  Q+ E+E  F++  +PD   R+
Sbjct: 117 YSSDEDMKHSHDDSMGNDNNNSDEPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSRE 176

Query: 122 ELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRA 166
           EL+ ++ L  ++V+ WFQN+R + + Q E+ E  Q++ +   + A
Sbjct: 177 ELALKVNLPEVRVQVWFQNRRAKWRRQ-EKMEAQQMKLQEYPMTA 220


>gi|297792823|ref|XP_002864296.1| ATHB52 [Arabidopsis lyrata subsp. lyrata]
 gi|297310131|gb|EFH40555.1| ATHB52 [Arabidopsis lyrata subsp. lyrata]
          Length = 156

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 3/89 (3%)

Query: 82  DDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 141
           + Q Q  NKKKR    TQ Q++++E  F      +   + +LS +LGL   QV  WFQNK
Sbjct: 3   NSQSQSKNKKKRL---TQEQVRQLEKCFTVNKKLEPDLKLQLSNQLGLPQRQVAVWFQNK 59

Query: 142 RTQMKTQHERHENTQLRTENEKLRADNMR 170
           R + KTQ    ++  L+++ E   +D  +
Sbjct: 60  RARSKTQSLEVQHCTLQSKLEAALSDKAK 88


>gi|55296008|dbj|BAD68899.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 285

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%)

Query: 275 DKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPR---GIGPKPTG 331
           DKP I+ELA   ++EL+ M    EPLW+  ++    +LN DEYV  F R   G G +  G
Sbjct: 145 DKPRILELATRVLDELVEMCSSSEPLWVRGVETDRDILNYDEYVCLFHRDHGGYGDRMAG 204

Query: 332 FKCEA 336
           +  EA
Sbjct: 205 WSVEA 209


>gi|185133831|ref|NP_001117173.1| paired-like homeodomain transcription factor 1beta [Salmo salar]
 gi|158380233|gb|ABW37413.1| paired-like homeodomain transcription factor 1beta [Salmo salar]
          Length = 316

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 16/150 (10%)

Query: 21  NVGGLGSSSGLTLSQ--------PTNMMEGQLHPLDMTQNTSESEIARLREEEFDST--- 69
           NV   G++ G+ L +        PT  M    H L  T N +   +     E  D+    
Sbjct: 8   NVTPCGNTGGMNLDRIAETVRPPPTRDMASTFH-LPRTANNTRETLENSSSESSDTEITE 66

Query: 70  KSGSENHEGASG--DDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL 127
           K  S  H    G  DD +++  +++R H  T  Q+QE+EA F+   +PD   R+E++   
Sbjct: 67  KERSVEHRSDDGNADDPKKKKARRQRTH-FTSQQLQELEATFQRNRYPDMSTREEIAVWT 125

Query: 128 GLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
            L   +V+ WF+N+R + + + ER++   L
Sbjct: 126 NLTEARVRVWFKNRRAKWR-KRERNQQMDL 154


>gi|161076856|ref|NP_001097140.1| CG34367, isoform C [Drosophila melanogaster]
 gi|157400139|gb|ABV53663.1| CG34367, isoform C [Drosophila melanogaster]
          Length = 420

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 6/68 (8%)

Query: 89  NKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           N K+R  R   T  Q+ E+E  F+E  +PD   R+ELS+ LGL   +V+ WFQN+R + +
Sbjct: 189 NTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR 248

Query: 147 TQHERHEN 154
               +HEN
Sbjct: 249 ----KHEN 252


>gi|311275888|ref|XP_003134962.1| PREDICTED: short stature homeobox protein-like isoform 2 [Sus
           scrofa]
          Length = 292

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 18/146 (12%)

Query: 12  MPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLH-PLDMTQNTSESEIARLREEEFDSTK 70
           + S + R+  +GG  S S L      ++ EG  H P+ + ++  +++  +L+E  F + +
Sbjct: 39  LESGLARSRELGG--SDSNLQ-----DITEGSGHCPVHLFKDHVDNDKDKLKE--FGTGR 89

Query: 71  SG------SENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKE 122
           +        +  E    +D++ +   K+R  R   T  Q+ E+E  F E  +PD   R+E
Sbjct: 90  AAEGIYDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 149

Query: 123 LSRELGLEPLQVKFWFQNKRTQMKTQ 148
           LS+ LGL   +V+ WFQN+R + + Q
Sbjct: 150 LSQRLGLSEARVQVWFQNRRAKCRKQ 175


>gi|281364781|ref|NP_001162934.1| CG34367, isoform B [Drosophila melanogaster]
 gi|124248424|gb|ABM92832.1| IP17602p [Drosophila melanogaster]
 gi|272406982|gb|AAF52920.2| CG34367, isoform B [Drosophila melanogaster]
          Length = 297

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 6/68 (8%)

Query: 89  NKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           N K+R  R   T  Q+ E+E  F+E  +PD   R+ELS+ LGL   +V+ WFQN+R + +
Sbjct: 66  NTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR 125

Query: 147 TQHERHEN 154
               +HEN
Sbjct: 126 ----KHEN 129


>gi|291231892|ref|XP_002735897.1| PREDICTED: aristaless homeodomain transcription factor-like
           [Saccoglossus kowalevskii]
          Length = 236

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 6/101 (5%)

Query: 52  NTSESEIARLREEEFDST----KSGSENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEM 105
           N S +E  +L ++E DS         EN EG    D      +KKR +R   T  Q+ EM
Sbjct: 61  NNSNTEEDKLEQDEVDSKGDLISDQDENKEGTEQSDTSDSSKRKKRRNRTTFTSFQLDEM 120

Query: 106 EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
           E  F+   +PD   R++L+    L   +V+ WFQN+R + +
Sbjct: 121 EKVFQRTHYPDVYSREQLALRCDLTEARVQVWFQNRRAKWR 161


>gi|19168460|dbj|BAB85815.1| aristaless protein [Gryllus bimaculatus]
          Length = 391

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 2/82 (2%)

Query: 71  SGSENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELG 128
           S + +H    G+  E  P +K+R +R   T  Q++E+E  F    +PD   R+EL+ ++G
Sbjct: 79  SNASDHNSEEGELDEFAPKRKQRRYRTTFTSFQLEELEKAFTRTHYPDVFTREELAIKIG 138

Query: 129 LEPLQVKFWFQNKRTQMKTQHE 150
           L   +++ WFQN+R + + Q +
Sbjct: 139 LTEARIQVWFQNRRAKWRKQEK 160


>gi|148539550|ref|NP_001091900.1| pituitary homeobox 1 [Xenopus laevis]
 gi|10798738|emb|CAC12834.1| Pitx1 protein [Xenopus laevis]
          Length = 305

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 26/136 (19%)

Query: 35  QPTNMMEGQLH---------PLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQE 85
           QP++ M    H         P+D   + SES    + E+E    ++G    E  +GDD  
Sbjct: 20  QPSHDMATSFHLQRSSEARDPMD--NSASESSDTEIVEKE----RTGEPKGEDGNGDD-- 71

Query: 86  QRPNKKKRYHRHTQH----QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 141
             P+KKK+  R   H    Q+QE+EA F+   +PD   R+E++    L   +V+ WF+N+
Sbjct: 72  --PSKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEARVRVWFKNR 129

Query: 142 RTQMKTQHERHENTQL 157
           R + +   +R  N Q+
Sbjct: 130 RAKWR---KRERNQQM 142


>gi|395752027|ref|XP_003779346.1| PREDICTED: visual system homeobox 1 isoform 2 [Pongo abelii]
          Length = 301

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 5/104 (4%)

Query: 62  REEEFDSTKSGSENHEGASGDDQEQRP---NKKKRYHR--HTQHQIQEMEAFFKECPHPD 116
           R++  +S  +  E+ +    +D +  P    +KKR HR   T HQ++E+E  F E  +PD
Sbjct: 131 RQKRSESVSTSDEDSQSEDRNDLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPD 190

Query: 117 DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTE 160
              R+ L+ +  L   +++ WFQN+R + + + +R   + +  E
Sbjct: 191 VYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAE 234


>gi|195029469|ref|XP_001987595.1| GH22006 [Drosophila grimshawi]
 gi|193903595|gb|EDW02462.1| GH22006 [Drosophila grimshawi]
          Length = 879

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 7/100 (7%)

Query: 64  EEFDSTKSGSENHEGASG-DDQEQRPNKKKRYHRH-----TQHQIQEMEAFFKECPHPDD 117
           E+ + T +  +  +  SG DD+ Q  N  K+ HR      T +Q+ E+E  F++  +PD 
Sbjct: 512 EDLNQTNNSEQGEKITSGSDDEGQDENCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 571

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
             R+EL+ ++ L  ++V+ WFQN+R + + Q E+ E+ +L
Sbjct: 572 YSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKSESLRL 610


>gi|357464079|ref|XP_003602321.1| Homeobox-leucine zipper protein ATHB-7 [Medicago truncatula]
 gi|355491369|gb|AES72572.1| Homeobox-leucine zipper protein ATHB-7 [Medicago truncatula]
          Length = 244

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 42/69 (60%)

Query: 96  RHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENT 155
           R +  QI+ +E  F+     + +++ +L+R+LGL+P QV  WFQN+R + K++    E  
Sbjct: 40  RFSDEQIRSLECIFESESKLEPRKKMQLARDLGLQPRQVAIWFQNRRARWKSKRIEQEYR 99

Query: 156 QLRTENEKL 164
           +L+ E + L
Sbjct: 100 KLKDEYDNL 108


>gi|359322630|ref|XP_003639881.1| PREDICTED: short stature homeobox protein 2 [Canis lupus
           familiaris]
          Length = 319

 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 73  SENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLE 130
            E  E A G + E +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL 
Sbjct: 121 KERKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLS 180

Query: 131 PLQVKFWFQNKRTQMKTQH 149
             +V+ WFQN+R + + Q 
Sbjct: 181 EARVQVWFQNRRAKCRKQE 199


>gi|359322628|ref|XP_542854.4| PREDICTED: short stature homeobox protein 2 isoform 1 [Canis lupus
           familiaris]
          Length = 331

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 74  ENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
           E  E A G + E +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL  
Sbjct: 122 ERKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 181

Query: 132 LQVKFWFQNKRTQMKTQH 149
            +V+ WFQN+R + + Q 
Sbjct: 182 ARVQVWFQNRRAKCRKQE 199


>gi|242036675|ref|XP_002465732.1| hypothetical protein SORBIDRAFT_01g044620 [Sorghum bicolor]
 gi|241919586|gb|EER92730.1| hypothetical protein SORBIDRAFT_01g044620 [Sorghum bicolor]
          Length = 324

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 2/78 (2%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +KKR  R  Q Q++ +E  F+     D  ++  ++R+L L+P QV  WFQN+R + KT+ 
Sbjct: 69  EKKR--RLLQEQVRALERCFETDNKLDPDRKARIARDLALQPRQVAVWFQNRRARWKTKT 126

Query: 150 ERHENTQLRTENEKLRAD 167
              + + LR  ++ LRAD
Sbjct: 127 LERDFSALRARHDALRAD 144


>gi|115451237|ref|NP_001049219.1| Os03g0188900 [Oryza sativa Japonica Group]
 gi|122247443|sp|Q10QP3.1|HOX13_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX13; AltName:
           Full=HD-ZIP protein HOX13; AltName: Full=Homeodomain
           transcription factor HOX13; AltName: Full=OsHox13
 gi|108706589|gb|ABF94384.1| Homeobox domain containing protein, expressed [Oryza sativa
           Japonica Group]
 gi|113547690|dbj|BAF11133.1| Os03g0188900 [Oryza sativa Japonica Group]
 gi|215715349|dbj|BAG95100.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215740668|dbj|BAG97324.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 311

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 2/78 (2%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +KKR  R    Q++ +E  F      D  ++  ++R+LGL+P QV  WFQN+R + KT+ 
Sbjct: 71  EKKR--RLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQ 128

Query: 150 ERHENTQLRTENEKLRAD 167
              +   LR  ++ LRAD
Sbjct: 129 LERDFAALRARHDALRAD 146


>gi|91087879|ref|XP_969925.1| PREDICTED: similar to transcription factor protein [Tribolium
           castaneum]
 gi|270012765|gb|EFA09213.1| munster [Tribolium castaneum]
          Length = 220

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 66  FDSTKSGSENHEGASGDDQEQRPNKKKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKEL 123
            D  K   +++   + DD      +K+R +R T   +Q++E+E  F +  +PD   R+EL
Sbjct: 20  LDFEKEDRQDYHNYAEDDANNASKRKQRRYRTTFSNYQLEELERAFHKTHYPDVFFREEL 79

Query: 124 SRELGLEPLQVKFWFQNKRTQMKTQHERHENTQ 156
           +  + L   +V+ WFQN+R + + Q +  +N Q
Sbjct: 80  ALRIDLTEARVQVWFQNRRAKWRKQEKSVKNAQ 112


>gi|357449711|ref|XP_003595132.1| Homeobox-leucine zipper protein [Medicago truncatula]
 gi|355484180|gb|AES65383.1| Homeobox-leucine zipper protein [Medicago truncatula]
          Length = 215

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 10/166 (6%)

Query: 11  NMPSTIGRNGNVGGLGSSSGLTLSQPTNMMEGQLHPLDMTQN-TSESEIARLREEEFDST 69
           +M ST+  N  +G LGS     +++P    + +L  +D+  +  +E  + R+ EE+ ++ 
Sbjct: 8   HMASTLDLNLKLG-LGSYVQNNVNKPLVDSKEEL-AIDLNHDRANELSLKRVHEEQANTV 65

Query: 70  KSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGL 129
           +   E     + +D    P K     R T  Q  ++E  FK     +  Q++ L+ EL L
Sbjct: 66  E---EEIAIDTTNDNNGCPKKL----RLTTEQSNKLENAFKRHNTINTAQKRALAEELNL 118

Query: 130 EPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREAL 175
           +  QV+ WFQN+R + K +        LR  +EKL  +N+R ++ L
Sbjct: 119 KQRQVEVWFQNRRARTKLKQTEVNCIYLRKCHEKLSEENLRLKKEL 164


>gi|12746271|gb|AAK07422.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
          Length = 333

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 57/92 (61%), Gaps = 7/92 (7%)

Query: 79  ASGD----DQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPL 132
           A+GD    ++E+ P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  +
Sbjct: 111 AAGDSKLSEEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEV 170

Query: 133 QVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
           +V+ WFQN+R + + Q E+ E + ++ ++  L
Sbjct: 171 RVQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPL 201


>gi|16758430|ref|NP_446130.1| retinal homeobox protein Rx [Rattus norvegicus]
 gi|18203127|sp|Q9JLT7.1|RX_RAT RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
           anterior neural fold homeobox protein
 gi|7384990|gb|AAF61631.1|AF135839_1 homeodomain protein RX [Rattus norvegicus]
 gi|12746272|gb|AAK07423.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
 gi|149064497|gb|EDM14700.1| retina and anterior neural fold homeobox, isoform CRA_b [Rattus
           norvegicus]
          Length = 342

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 57/92 (61%), Gaps = 7/92 (7%)

Query: 79  ASGD----DQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPL 132
           A+GD    ++E+ P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  +
Sbjct: 120 AAGDSKLSEEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEV 179

Query: 133 QVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
           +V+ WFQN+R + + Q E+ E + ++ ++  L
Sbjct: 180 RVQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPL 210


>gi|1346302|sp|P09076.3|HME30_APIME RecName: Full=Homeobox protein E30
 gi|155670|gb|AAA27725.1| E30 protein, partial [Apis mellifera]
          Length = 109

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 5/78 (6%)

Query: 69  TKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELG 128
           T+    +H G +G  +E+RP         +  Q+  ++  F E  +  +++R++LSR+LG
Sbjct: 4   TRRVKRSHNGKNGSPEEKRPRTA-----FSAEQLARLKREFAENRYLTERRRQQLSRDLG 58

Query: 129 LEPLQVKFWFQNKRTQMK 146
           L   Q+K WFQNKR ++K
Sbjct: 59  LTEAQIKIWFQNKRAKIK 76


>gi|395527040|ref|XP_003765660.1| PREDICTED: short stature homeobox protein isoform 2 [Sarcophilus
           harrisii]
          Length = 303

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 10/111 (9%)

Query: 46  PLDMTQNTSESEIARLREEEFDSTKSG------SENHEGASGDDQEQRPNKKKRYHR--H 97
           P+ + ++  ES+  +L+E  F + ++        E  E    +D++ +   K+R  R   
Sbjct: 67  PVHLFKDHVESDKDKLKE--FSTGRAAEGIYECKEKREEVKSEDEDGQTKLKQRRSRTNF 124

Query: 98  TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           T  Q+ E+E  F E  +PD   R+ELS+ LGL   +V+ WFQN+R + + Q
Sbjct: 125 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 175


>gi|302780437|ref|XP_002971993.1| hypothetical protein SELMODRAFT_19476 [Selaginella moellendorffii]
 gi|300160292|gb|EFJ26910.1| hypothetical protein SELMODRAFT_19476 [Selaginella moellendorffii]
          Length = 87

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +KKR  R +  Q++ +E  F+     + +++K+L+ ELGL+P QV  WFQN+R + KT+ 
Sbjct: 1   EKKR--RLSVDQVRSLELNFEMENKLEPERKKQLAHELGLQPRQVAVWFQNRRARWKTKQ 58

Query: 150 ERHENTQLRTENEKLRADNMRYREALSN 177
              +   L+   +KL  +N + +  +S+
Sbjct: 59  LERDYESLKASYDKLLLENKKLQAEVSS 86


>gi|3153207|gb|AAC39462.1| ATHB-12 [Arabidopsis thaliana]
          Length = 235

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 39/69 (56%)

Query: 96  RHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENT 155
           R  + QI+ +E  F+     + +++ +++RELGL+P Q+  WFQNKR + KT+    E  
Sbjct: 33  RFNEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQMTIWFQNKRARWKTKQLEKEYN 92

Query: 156 QLRTENEKL 164
            LR     L
Sbjct: 93  TLRANYNNL 101


>gi|322692435|gb|EFY84346.1| homeobox transcription factor, putative [Metarhizium acridum CQMa
           102]
          Length = 295

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 7/120 (5%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL-GLEPLQVKFWFQNKRTQMK-- 146
           K KR+ R T  Q + +   F + PHPD   R+ LSRE+ GL P QV+ WFQN+R +MK  
Sbjct: 173 KMKRF-RLTPQQTRFLMGEFAKQPHPDATLRERLSREIPGLSPRQVQVWFQNRRAKMKRV 231

Query: 147 TQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARL 206
           T ++R    Q+R   +    DN++   +  +A       P+ +G M    H    +N R+
Sbjct: 232 TINDRERMIQMRAVPDNF--DNLQALHSPYSAVNGIGASPSNLGPM-VPPHRSAFDNGRI 288


>gi|109508442|ref|XP_001063896.1| PREDICTED: intestine-specific homeobox-like [Rattus norvegicus]
 gi|392354889|ref|XP_003751881.1| PREDICTED: intestine-specific homeobox-like [Rattus norvegicus]
 gi|149032479|gb|EDL87370.1| rCG39109 [Rattus norvegicus]
          Length = 240

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%)

Query: 67  DSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRE 126
            +T SGS+  +      QE+R NK++     T  Q+QE+E  F    +PD   R +L+  
Sbjct: 55  QTTTSGSKLEKPTQDQPQEERKNKRRVRTTFTTEQLQELEKLFHFTHYPDIHVRSQLASR 114

Query: 127 LGLEPLQVKFWFQNKRTQMKTQHE 150
           + L   +V+ WFQN+R + + Q +
Sbjct: 115 INLPEARVQIWFQNQRAKWRKQEK 138


>gi|344030242|ref|NP_001230663.1| retinal homeobox protein Rx [Taeniopygia guttata]
          Length = 316

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 56/93 (60%), Gaps = 3/93 (3%)

Query: 78  GASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVK 135
           G     +E++P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  ++V+
Sbjct: 107 GEGKPSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAIKVNLPEVRVQ 166

Query: 136 FWFQNKRTQMKTQHERHENTQLRTENEKLRADN 168
            WFQN+R + + Q E+ E T ++ ++  + + N
Sbjct: 167 VWFQNRRAKWRRQ-EKLEVTSMKLQDSPILSFN 198


>gi|410896362|ref|XP_003961668.1| PREDICTED: short stature homeobox protein-like isoform 1 [Takifugu
           rubripes]
          Length = 282

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 6/117 (5%)

Query: 38  NMMEGQLHPLDMTQNTSESEIARLREEEFDSTKSG----SENHEGASGDDQEQRPNKKKR 93
           ++ EG   P+ + ++  E E  +L++        G     E  E    +D++ +   K+R
Sbjct: 49  DITEGGHCPVHLFKDHVELEKEKLKDFSVSRATEGIYECKEKKEDVKSEDEDGQGKLKQR 108

Query: 94  YHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
             R   T  Q+ E+E  F E  +PD   R+ELS+ LGL   +V+ WFQN+R + + Q
Sbjct: 109 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 165


>gi|301618805|ref|XP_002938795.1| PREDICTED: LIM/homeobox protein Lhx2-like [Xenopus (Silurana)
           tropicalis]
          Length = 419

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 3/104 (2%)

Query: 66  FDSTKSGSENHEGASGDDQEQRPNKKKRYHRHT--QHQIQEMEAFFKECPHPDDKQRKEL 123
           +++  S +EN       DQ+  PN+K +  R +   HQ++ M+++F    +PD K  K+L
Sbjct: 253 YNAALSCNENDGDHMDRDQQYTPNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQL 312

Query: 124 SRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL-RTENEKLRA 166
           +++ GL    ++ WFQN R + +    R EN  + +T +  L+A
Sbjct: 313 AQKTGLTKRVLQVWFQNARAKFRRNLLRQENNGVDKTSDSTLQA 356


>gi|60392419|sp|Q9DDU2.1|HXABB_DANAE RecName: Full=Homeobox protein Hox-A11b
 gi|11611813|gb|AAG39067.1| Hoxa-11b [Devario aequipinnatus]
          Length = 283

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 81/174 (46%), Gaps = 29/174 (16%)

Query: 9   ARNMPSTIGRNGNVGG-----LGSSSGLTLSQPTNMMEGQLHPLDMT--------QNTSE 55
           A NM   +GRNG +         ++ G   +QPT+      HP+D T        ++ S+
Sbjct: 121 ASNMYGNVGRNGVLPQAFDQFFETTYGNVENQPTD------HPVDRTASKAPPPAESGSD 174

Query: 56  S-----EIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFK 110
           S     E  R  E       SG+ N E  SG    Q+  KK+    +T++QI+E+E  F 
Sbjct: 175 SCRGTDETERCEETSSPEPSSGN-NEEKFSGSSNGQKTRKKR--CPYTKYQIRELEREFF 231

Query: 111 ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
              + + ++R +LSR L L   QVK WFQN+R  MK +    +  Q  T N  L
Sbjct: 232 FSVYINKEKRLQLSRMLNLTDRQVKIWFQNRR--MKEKKLNRDRLQYYTTNPLL 283


>gi|18203021|sp|Q9I9D5.1|RX1_ASTFA RecName: Full=Retinal homeobox protein Rx1
 gi|8099680|gb|AAF72201.1|AF264703_1 retinal homeobox protein [Astyanax mexicanus]
          Length = 334

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 10/99 (10%)

Query: 52  NTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFF 109
           N  ESE+  +R+       S S+      GD  E++P KK R +R   T +Q+ E+E  F
Sbjct: 110 NKCESELGEVRK------VSDSDRKSPEQGD--EEQPKKKHRRNRTTFTTYQLHELERAF 161

Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           ++  +PD   R+EL+ ++ L  ++V+ WFQN+R + + Q
Sbjct: 162 EKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ 200


>gi|395527038|ref|XP_003765659.1| PREDICTED: short stature homeobox protein isoform 1 [Sarcophilus
           harrisii]
          Length = 292

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 10/111 (9%)

Query: 46  PLDMTQNTSESEIARLREEEFDSTKSG------SENHEGASGDDQEQRPNKKKRYHR--H 97
           P+ + ++  ES+  +L+E  F + ++        E  E    +D++ +   K+R  R   
Sbjct: 67  PVHLFKDHVESDKDKLKE--FSTGRAAEGIYECKEKREEVKSEDEDGQTKLKQRRSRTNF 124

Query: 98  TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           T  Q+ E+E  F E  +PD   R+ELS+ LGL   +V+ WFQN+R + + Q
Sbjct: 125 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 175


>gi|6093720|sp|P56673.1|PITX1_CHICK RecName: Full=Pituitary homeobox 1; AltName: Full=Homeobox protein
           PITX1; AltName: Full=Paired-like homeodomain
           transcription factor 1; AltName: Full=cPTX1
          Length = 311

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 18/137 (13%)

Query: 35  QPTNMMEGQLH------PLDMTQNT-SESEIARLREEEFDSTK-------SGSENHEGAS 80
           QP++ M    H      P D  +N+ SES    + E+E   ++       +GS    GA+
Sbjct: 20  QPSHDMASSFHLQRSSEPRDPIENSASESSDTDVPEKERSESRKTREDGGAGSAGCTGAA 79

Query: 81  GDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 140
            D  +++  +++R H  T  Q+QE+EA F+   +PD   R+E++    L   +V+ WF+N
Sbjct: 80  DDPAKKKKQRRQRTH-FTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKN 138

Query: 141 KRTQMKTQHERHENTQL 157
           +R + +   +R  N Q+
Sbjct: 139 RRAKWR---KRERNQQM 152


>gi|46242605|gb|AAS83420.1| Hox13 [Oryza sativa Japonica Group]
          Length = 140

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 2/78 (2%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +KKR  R    Q++ +E  F      D  ++  ++R+LGL+P QV  WFQN+R + KT+ 
Sbjct: 17  EKKR--RLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQ 74

Query: 150 ERHENTQLRTENEKLRAD 167
              +   LR  ++ LRAD
Sbjct: 75  LERDFAALRARHDALRAD 92


>gi|356548619|ref|XP_003542698.1| PREDICTED: homeobox-leucine zipper protein HAT5-like [Glycine max]
          Length = 285

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 16/105 (15%)

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           +Q P KKK  HR +  Q+  +E  F+E    + +++ +L+++LGL+P QV  WFQN+R +
Sbjct: 60  KQSPEKKK--HRLSSEQVHLLEKNFEEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRAR 117

Query: 145 MKTQHERHENTQLRT--------------ENEKLRADNMRYREAL 175
            KT+    +   L++              ENEKL+++ +   E L
Sbjct: 118 WKTKQLERDYDVLKSSYDTLLSSYDSIMKENEKLKSEVVSLNEKL 162


>gi|195119474|ref|XP_002004256.1| GI19710 [Drosophila mojavensis]
 gi|193909324|gb|EDW08191.1| GI19710 [Drosophila mojavensis]
          Length = 884

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 7/100 (7%)

Query: 64  EEFDSTKSGSENHEGASG-DDQEQRPNKKKRYHRH-----TQHQIQEMEAFFKECPHPDD 117
           E+ + T S  +  +  SG DD+ Q  N  K+ HR      T +Q+ E+E  F++  +PD 
Sbjct: 521 EDLNQTNSSEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 580

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
             R+EL+ ++ L  ++V+ WFQN+R + + Q E+ E+ +L
Sbjct: 581 YSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKSESLRL 619


>gi|294462511|gb|ADE76802.1| unknown [Picea sitchensis]
          Length = 328

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 8/102 (7%)

Query: 66  FDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSR 125
           FD  ++G E+      DD    P KK+R    T  Q+Q +E  F+     + +++ +L++
Sbjct: 63  FDQEETGDED-----LDDCIHPPEKKRRL---TADQVQFLERSFEIENKLEPERKIQLAK 114

Query: 126 ELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRAD 167
           +LGL+P QV  WFQN+R + KT+    +   L++  E LR D
Sbjct: 115 DLGLQPRQVAVWFQNRRARWKTKQLERDYDILKSRYENLRVD 156


>gi|45384358|ref|NP_990341.1| pituitary homeobox 2 [Gallus gallus]
 gi|6093722|sp|O93385.1|PITX2_CHICK RecName: Full=Pituitary homeobox 2; AltName: Full=Homeobox protein
           PITX2; Short=cPITX2; AltName: Full=Paired-like
           homeodomain transcription factor 2
 gi|3335643|gb|AAC27322.1| transcription factor Pitx2 [Gallus gallus]
          Length = 333

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 18/140 (12%)

Query: 24  GLGSSSGLTLSQPTNMMEGQLHPLDM--TQNTSESEIARLREEEFDSTKSGSENHEGASG 81
            L  ++ L   Q  + +E   H L++    +TS  E A   E+E        ++ +G S 
Sbjct: 40  ALAMATALAPGQARSSLEAAKHRLEVHTISDTSSPEAA---EKE--------KSQQGKSE 88

Query: 82  DDQEQRPNKKKRYHRHTQH----QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFW 137
           D   + P+KKKR  R   H    Q+QE+EA F+   +PD   R+E++    L   +V+ W
Sbjct: 89  DAGPEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVW 148

Query: 138 FQNKRTQMKTQHERHENTQL 157
           F+N+R + + + ER++  +L
Sbjct: 149 FKNRRAKWR-KRERNQQAEL 167


>gi|350606310|ref|NP_001234250.1| homeobox [Solanum lycopersicum]
 gi|1161575|emb|CAA64417.1| homeobox [Solanum lycopersicum]
          Length = 323

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 9/143 (6%)

Query: 90  KKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +KKR  R T +Q+Q +E  F E    + +++ +L++ELGL+P Q+  WFQN+R + KT+ 
Sbjct: 89  EKKR--RLTDNQVQFLEKSFGEENKLEPERKVQLAKELGLQPRQIAIWFQNRRARWKTKQ 146

Query: 150 ERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEH-HLRLENARLRE 208
              +  +LR   + L+++   Y   L              G++   E  + +L+   LR+
Sbjct: 147 LEKDYDELRNRYDTLKSN---YNNLLKEKEDLRTEVFRLTGKLFIKEKGNGQLD---LRD 200

Query: 209 EIDRISAIAAKYVGKPVVNYPLL 231
           E    +A+A + V  P+ N P L
Sbjct: 201 EHKHSNALAKETVVDPMSNVPAL 223


>gi|426219373|ref|XP_004003900.1| PREDICTED: short stature homeobox protein 2 [Ovis aries]
          Length = 321

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 73  SENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLE 130
            +  E A G + E +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL 
Sbjct: 111 KDRKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLS 170

Query: 131 PLQVKFWFQNKRTQMKTQH 149
             +V+ WFQN+R + + Q 
Sbjct: 171 EARVQVWFQNRRAKCRKQE 189


>gi|348528190|ref|XP_003451601.1| PREDICTED: short stature homeobox protein-like isoform 2
           [Oreochromis niloticus]
          Length = 293

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 10/111 (9%)

Query: 46  PLDMTQNTSESEIARLREEEFDSTKSG------SENHEGASGDDQEQRPNKKKRYHR--H 97
           P+ + ++  E E  +L++  F+ T++        E  E    +D++ +   K+R  R   
Sbjct: 57  PVHLFKDHVELEKEKLKD--FNVTRATEGIYECKEKKEDVKSEDEDAQGKLKQRRSRTNF 114

Query: 98  TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           T  Q+ E+E  F E  +PD   R+ELS+ LGL   +V+ WFQN+R + + Q
Sbjct: 115 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 165


>gi|89274179|ref|NP_038861.2| retinal homeobox protein Rx [Mus musculus]
 gi|341941993|sp|O35602.2|RX_MOUSE RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
           anterior neural fold homeobox protein
 gi|1932775|gb|AAC53129.1| paired-type homeobox gene [Mus musculus]
 gi|19354403|gb|AAH24731.1| Retina and anterior neural fold homeobox [Mus musculus]
 gi|37589415|gb|AAH58757.1| Retina and anterior neural fold homeobox [Mus musculus]
 gi|148677729|gb|EDL09676.1| retina and anterior neural fold homeobox, isoform CRA_a [Mus
           musculus]
          Length = 342

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 56/91 (61%), Gaps = 6/91 (6%)

Query: 79  ASGDD---QEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
           A+GD    +E+ P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  ++
Sbjct: 120 AAGDSKLSEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 179

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
           V+ WFQN+R + + Q E+ E + ++ ++  L
Sbjct: 180 VQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPL 209


>gi|388493514|gb|AFK34823.1| unknown [Lotus japonicus]
          Length = 147

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 5/109 (4%)

Query: 61  LREEEFDSTKSGSENHEGASGD-DQEQRPNKKKRY----HRHTQHQIQEMEAFFKECPHP 115
           + EE+ +   S  EN E  +   +  Q   KK R      R +  QI+ +E  F+     
Sbjct: 1   MMEEDENIQASIGENVESFTCSLEPPQNSRKKNRKVENKRRFSDEQIRSLECIFESESKL 60

Query: 116 DDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
           + +++ +L+++LGL+P QV  WFQN+R + K++    E  +L+ E + L
Sbjct: 61  EPRKKIQLAKDLGLQPRQVAIWFQNRRARWKSKRMEKEYRKLKDEYDNL 109


>gi|357614287|gb|EHJ69003.1| paired-like family homeodomain transcription factor [Danaus
           plexippus]
          Length = 258

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 2/71 (2%)

Query: 80  SGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFW 137
           SG D E  P +K+R +R   T +Q+ E+E  F    +PD   R+EL+ ++GL   +++ W
Sbjct: 26  SGVDDEDIPRRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALKIGLTEARIQVW 85

Query: 138 FQNKRTQMKTQ 148
           FQN+R + + Q
Sbjct: 86  FQNRRAKWRKQ 96


>gi|410982500|ref|XP_003997594.1| PREDICTED: divergent paired-related homeobox [Felis catus]
          Length = 194

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 7/101 (6%)

Query: 88  PNKKKRYHRH------TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 141
           P  K + H H      T+ Q++ +E  F + P+P    +KE++ +LG+ P  ++ WF+N 
Sbjct: 12  PGGKHQKHSHRKRTMFTEDQLEALEFLFSQNPYPPPSLQKEMALKLGIHPTVLQVWFKNH 71

Query: 142 RTQMKTQHERHENTQLRTENEKLRADNMRYREALSN-ASCP 181
           R ++K    +H   +   E E++   +++   +  N A+ P
Sbjct: 72  RAKLKKAQYKHMQQKPEPEQEQVAGVDLKTSSSKRNMATSP 112


>gi|395830733|ref|XP_003788473.1| PREDICTED: retinal homeobox protein Rx [Otolemur garnettii]
          Length = 344

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 57/91 (62%), Gaps = 6/91 (6%)

Query: 79  ASGD---DQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
           A+GD    +E++P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  ++
Sbjct: 120 ATGDAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 179

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
           V+ WFQN+R + + Q E+ E + ++ ++  L
Sbjct: 180 VQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPL 209


>gi|392564614|gb|EIW57792.1| homeobox-domain-containing protein [Trametes versicolor FP-101664
           SS1]
          Length = 462

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 41/65 (63%)

Query: 89  NKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
            ++++  R TQ Q+ ++E +F     P   +R+++++ELGL+  Q + WFQN+R ++K Q
Sbjct: 11  KQRRKRSRTTQEQLAKLEEYFAADQSPTSARRRDIAQELGLDERQTQIWFQNRRAKVKLQ 70

Query: 149 HERHE 153
            +  E
Sbjct: 71  AKMRE 75


>gi|296222754|ref|XP_002757333.1| PREDICTED: retinal homeobox protein Rx [Callithrix jacchus]
          Length = 344

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 53/83 (63%), Gaps = 3/83 (3%)

Query: 84  QEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 141
           +E++P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  ++V+ WFQN+
Sbjct: 128 EEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 187

Query: 142 RTQMKTQHERHENTQLRTENEKL 164
           R + + Q E+ E + ++ ++  L
Sbjct: 188 RAKWRRQ-EKLEVSSMKLQDSPL 209


>gi|297709290|ref|XP_002831369.1| PREDICTED: short stature homeobox protein isoform 1 [Pongo abelii]
          Length = 292

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 14/150 (9%)

Query: 24  GLGSSSGLTLSQPT--NMMEGQLH-PLDMTQNTSESEIARLREEEFDSTKSG------SE 74
           GL  S  L  S  +  ++ EG  H P+ + ++  E++  +L+E  F + +         E
Sbjct: 42  GLARSRELGTSDSSLQDITEGGGHCPVHLFKDHVENDKEKLKE--FGTARVAEGIYECKE 99

Query: 75  NHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPL 132
             E    +D++ +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL   
Sbjct: 100 KREEVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 159

Query: 133 QVKFWFQNKRTQMKTQ-HERHENTQLRTEN 161
           +V+ WFQN+R + + Q ++ H+   L T N
Sbjct: 160 RVQVWFQNRRAKCRKQENQMHKGVILGTAN 189


>gi|3184521|gb|AAC18965.1| EmH-3 [Ephydatia muelleri]
          Length = 166

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 2/86 (2%)

Query: 70  KSGSENHEGASGDDQEQR--PNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL 127
           + G E+    SG+D E      +KK     ++ Q+ E+E  F++  +    +R EL+ +L
Sbjct: 73  EQGRESTSSTSGNDAEDDLLTRRKKARTAFSREQVAELEKKFQDKKYLSSAERGELAEKL 132

Query: 128 GLEPLQVKFWFQNKRTQMKTQHERHE 153
            L  +QVK WFQN+R + K Q E  E
Sbjct: 133 KLSDMQVKTWFQNRRMKYKRQSEETE 158


>gi|2240024|gb|AAB62324.1| retinal homeobox protein [Mus musculus]
          Length = 342

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 56/91 (61%), Gaps = 6/91 (6%)

Query: 79  ASGDD---QEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
           A+GD    +E+ P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  ++
Sbjct: 120 AAGDSKLSEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 179

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
           V+ WFQN+R + + Q E+ E + ++ ++  L
Sbjct: 180 VQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPL 209


>gi|426391201|ref|XP_004061969.1| PREDICTED: visual system homeobox 1 isoform 2 [Gorilla gorilla
           gorilla]
          Length = 301

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 5/104 (4%)

Query: 62  REEEFDSTKSGSENHEGASGDDQEQRP---NKKKRYHR--HTQHQIQEMEAFFKECPHPD 116
           R++  +S  +  E+ +    +D +  P    +KKR HR   T HQ++E+E  F E  +PD
Sbjct: 131 RQKRSESVSTSDEDSQSEDRNDLKASPTSGKRKKRRHRTVFTAHQLEELEKAFSEAHYPD 190

Query: 117 DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTE 160
              R+ L+ +  L   +++ WFQN+R + + + +R   + +  E
Sbjct: 191 VYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAE 234


>gi|74002160|ref|XP_863661.1| PREDICTED: pituitary homeobox 2 isoform 3 [Canis lupus familiaris]
 gi|301764280|ref|XP_002917558.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Ailuropoda
           melanoleuca]
 gi|345795854|ref|XP_003434086.1| PREDICTED: pituitary homeobox 2 [Canis lupus familiaris]
          Length = 317

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 15/108 (13%)

Query: 64  EEFDSTKSGSENHEGASGDDQEQR----------PNKKKRYHRHTQH----QIQEMEAFF 109
           +E  S+K     H GA+  D+ Q+          P+KKKR  R   H    Q+QE+EA F
Sbjct: 45  KEAASSKLFPRQHPGATEKDKSQQGKNEDVGTEDPSKKKRQRRQRTHFTSQQLQELEATF 104

Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           +   +PD   R+E++    L   +V+ WF+N+R + + + ER++  +L
Sbjct: 105 QRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 151


>gi|354504449|ref|XP_003514288.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Cricetulus griseus]
 gi|344255585|gb|EGW11689.1| Pituitary homeobox 2 [Cricetulus griseus]
          Length = 322

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 8/97 (8%)

Query: 68  STKSGSENHEGASGDDQE---QRPNKKKRYHRHTQH----QIQEMEAFFKECPHPDDKQR 120
           S+   SE  +G  G +++   + P+KKKR  R   H    Q+QE+EA F+   +PD   R
Sbjct: 63  SSPEASEKDKGQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTR 122

Query: 121 KELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           +E++    L   +V+ WF+N+R + + + ER++  +L
Sbjct: 123 EEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 158


>gi|24234708|ref|NP_700475.1| pituitary homeobox 2 isoform b [Homo sapiens]
 gi|324710992|ref|NP_001191326.1| pituitary homeobox 2 isoform b [Homo sapiens]
 gi|324710994|ref|NP_001191327.1| pituitary homeobox 2 isoform b [Homo sapiens]
 gi|397519871|ref|XP_003830076.1| PREDICTED: pituitary homeobox 2 isoform 2 [Pan paniscus]
 gi|6174907|sp|Q99697.2|PITX2_HUMAN RecName: Full=Pituitary homeobox 2; AltName: Full=ALL1-responsive
           protein ARP1; AltName: Full=Homeobox protein PITX2;
           AltName: Full=Paired-like homeodomain transcription
           factor 2; AltName: Full=RIEG bicoid-related homeobox
           transcription factor; AltName: Full=Solurshin
 gi|3078009|gb|AAC39717.1| ALL1 responsive protein ARP1b [Homo sapiens]
 gi|119626667|gb|EAX06262.1| paired-like homeodomain transcription factor 2, isoform CRA_a [Homo
           sapiens]
 gi|193785429|dbj|BAG54582.1| unnamed protein product [Homo sapiens]
 gi|410342051|gb|JAA39972.1| paired-like homeodomain 2 [Pan troglodytes]
          Length = 317

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 15/108 (13%)

Query: 64  EEFDSTKSGSENHEGASGDDQEQR----------PNKKKRYHRHTQH----QIQEMEAFF 109
           +E  S+K     H GA+  D+ Q+          P+KKKR  R   H    Q+QE+EA F
Sbjct: 45  KEAASSKFFPRQHPGANEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATF 104

Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           +   +PD   R+E++    L   +V+ WF+N+R + + + ER++  +L
Sbjct: 105 QRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 151


>gi|410903484|ref|XP_003965223.1| PREDICTED: retinal homeobox protein Rx3-like [Takifugu rubripes]
          Length = 301

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 59/101 (58%), Gaps = 6/101 (5%)

Query: 64  EEFDSTKS-GSENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQR 120
           E FD++    S + +G   DD+   P KK R +R   T  Q+ E+E  F++  +PD   R
Sbjct: 82  ESFDTSACPDSPDRDGKLSDDEN--PKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSR 139

Query: 121 KELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTEN 161
           +EL+ ++ L  ++V+ WFQN+R + + Q E+ E + ++ ++
Sbjct: 140 EELALKVNLPEVRVQVWFQNRRAKWRRQ-EKLEVSSIKLQD 179


>gi|440895775|gb|ELR47885.1| Short stature homeobox protein 2, partial [Bos grunniens mutus]
          Length = 291

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 74  ENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
           +  E A G + E +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL  
Sbjct: 79  DRKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 138

Query: 132 LQVKFWFQNKRTQMKTQ 148
            +V+ WFQN+R + + Q
Sbjct: 139 ARVQVWFQNRRAKCRKQ 155


>gi|350537501|ref|NP_001234296.1| homeodomain leucine zipper protein [Solanum lycopersicum]
 gi|211853240|emb|CAP16664.1| homeodomain leucine zipper protein [Solanum lycopersicum]
          Length = 285

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 3/83 (3%)

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           EQ P KK+R    T  Q+  +E  F+     + +++ +L+++LGL+P QV  WFQN+R +
Sbjct: 61  EQSPEKKRRL---TPEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRAR 117

Query: 145 MKTQHERHENTQLRTENEKLRAD 167
            KT+    +  QL++  + L +D
Sbjct: 118 WKTKQLERDYDQLKSSYDSLLSD 140


>gi|6252914|dbj|BAA86252.1| HOXB9A [Oryzias latipes]
          Length = 113

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 9/91 (9%)

Query: 66  FDSTKSGSENHEGASGDDQEQ--------RPNKKKRYHRHTQHQIQEMEAFFKECPHPDD 117
           F+ +K G E  E   G DQ          R ++KKR   +T++Q  E+E  F    +   
Sbjct: 17  FEESKEGCEGSEDKDGPDQNDPSANWLHARSSRKKRC-PYTKYQTLELEKEFLFNMYLTR 75

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
            +R E++R L L   QVK WFQN+R +MK Q
Sbjct: 76  DRRHEVARALNLTERQVKIWFQNRRMKMKKQ 106


>gi|410957007|ref|XP_003985126.1| PREDICTED: pituitary homeobox 2 isoform 3 [Felis catus]
          Length = 317

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 15/108 (13%)

Query: 64  EEFDSTKSGSENHEGASGDDQEQR----------PNKKKRYHRHTQH----QIQEMEAFF 109
           +E  S+K     H GA+  D+ Q+          P+KKKR  R   H    Q+QE+EA F
Sbjct: 45  KEAASSKLFPRQHPGATEKDKSQQGKNEDVGPEDPSKKKRQRRQRTHFTSQQLQELEATF 104

Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           +   +PD   R+E++    L   +V+ WF+N+R + + + ER++  +L
Sbjct: 105 QRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 151


>gi|402870242|ref|XP_003899144.1| PREDICTED: pituitary homeobox 2 isoform 1 [Papio anubis]
 gi|402870248|ref|XP_003899147.1| PREDICTED: pituitary homeobox 2 isoform 4 [Papio anubis]
          Length = 317

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 15/108 (13%)

Query: 64  EEFDSTKSGSENHEGASGDDQEQR----------PNKKKRYHRHTQH----QIQEMEAFF 109
           +E  S+K     H+GA+  D+ Q+          P+KKKR  R   H    Q+QE+EA F
Sbjct: 45  KEAASSKLFPRQHQGANEKDKGQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATF 104

Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           +   +PD   R+E++    L   +V+ WF+N+R + + + ER++  +L
Sbjct: 105 QRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 151


>gi|327274064|ref|XP_003221798.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Anolis
           carolinensis]
          Length = 339

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 74/133 (55%), Gaps = 11/133 (8%)

Query: 28  SSGLTLSQPTNMME-GQLHPLDM--TQNTSESEIARLREEEFDSTKSGSENHEGASGDDQ 84
           +S L   QP + +E G+ H L++    +TS  E A     E D ++  S+N E  + D  
Sbjct: 49  ASSLAPGQPRSALESGKHHRLEVHTISDTSSPEAA-----EKDKSQP-SKNEEPGAEDPS 102

Query: 85  EQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 144
           +++  +++R H  T  Q+QE+EA F+   +PD   R+E++    L   +V+ WF+N+R +
Sbjct: 103 KKKRQRRQRTH-FTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAK 161

Query: 145 MKTQHERHENTQL 157
            + + ER++  +L
Sbjct: 162 WR-KRERNQQAEL 173


>gi|121714349|ref|XP_001274785.1| homeobox transcription factor, putative [Aspergillus clavatus NRRL
           1]
 gi|119402939|gb|EAW13359.1| homeobox transcription factor, putative [Aspergillus clavatus NRRL
           1]
          Length = 573

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 6/80 (7%)

Query: 68  STKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL 127
           S + G + H   + +D++    K KR+ R T +Q + + + F    HPD   R+ LSRE+
Sbjct: 169 SDEGGDQKHSSDAKNDKK----KMKRF-RLTHNQTRFLMSEFTRQAHPDAAHRERLSREI 223

Query: 128 -GLEPLQVKFWFQNKRTQMK 146
            GL P QV+ WFQN+R ++K
Sbjct: 224 PGLTPRQVQVWFQNRRAKLK 243


>gi|425777813|gb|EKV15969.1| Homeobox transcription factor, putative [Penicillium digitatum
           PHI26]
 gi|425782581|gb|EKV20480.1| Homeobox transcription factor, putative [Penicillium digitatum Pd1]
          Length = 445

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 3/105 (2%)

Query: 45  HPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRH--TQHQI 102
           HP +M  ++         + E +ST S  ++ +    DD      +KK+  R   T +Q 
Sbjct: 55  HPEEMGVSSFSGSHDSRDDHERESTISPDDDKDMMGSDDNRSPSMEKKKMKRFRLTHNQT 114

Query: 103 QEMEAFFKECPHPDDKQRKELSREL-GLEPLQVKFWFQNKRTQMK 146
           + + + F    HPD   R+ LSRE+ GL P QV+ WFQN+R ++K
Sbjct: 115 RFLMSEFTRQAHPDAAHRERLSREIPGLTPRQVQVWFQNRRAKLK 159


>gi|281485130|gb|ADA70355.1| paired-like family homeodomain transcription factor [Heliconius
           erato]
          Length = 259

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 2/73 (2%)

Query: 80  SGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFW 137
           SG D E  P +K+R +R   T +Q+ E+E  F    +PD   R+EL+ ++GL   +++ W
Sbjct: 26  SGMDDEDIPRRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALKIGLTEARIQVW 85

Query: 138 FQNKRTQMKTQHE 150
           FQN+R + + Q +
Sbjct: 86  FQNRRAKWRKQEK 98


>gi|148223283|ref|NP_001081712.1| ventral anterior homeobox 2a [Xenopus laevis]
 gi|82248156|sp|Q9PU20.1|VAX2A_XENLA RecName: Full=Ventral anterior homeobox 2a; AltName: Full=Xvax2
 gi|6066778|emb|CAB58181.1| Vax2 protein [Xenopus laevis]
 gi|213623667|gb|AAI70057.1| Vax2 protein [Xenopus laevis]
 gi|213623673|gb|AAI70063.1| Vax2 protein [Xenopus laevis]
          Length = 302

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 40/79 (50%)

Query: 91  KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           K+     T  Q+  +E  F+ C +   ++R EL+R+L L   QVK WFQN+RT+ K    
Sbjct: 106 KRTRTSFTAEQLYRLELEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQS 165

Query: 151 RHENTQLRTENEKLRADNM 169
           R    +  + +E     N+
Sbjct: 166 RDSEKRSSSTSESFATCNI 184


>gi|255936129|ref|XP_002559091.1| Pc13g06580 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583711|emb|CAP91727.1| Pc13g06580 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 532

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 3/87 (3%)

Query: 63  EEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRH--TQHQIQEMEAFFKECPHPDDKQR 120
           + E +ST S  ++ +    DD      +KK+  R   T +Q + + + F    HPD   R
Sbjct: 161 DHERESTISPDDDKDMMGSDDNRSPSMEKKKMKRFRLTHNQTRFLMSEFTRQAHPDAAHR 220

Query: 121 KELSREL-GLEPLQVKFWFQNKRTQMK 146
           + LSRE+ GL P QV+ WFQN+R ++K
Sbjct: 221 ERLSREIPGLTPRQVQVWFQNRRAKLK 247


>gi|195401629|ref|XP_002059415.1| GJ17468 [Drosophila virilis]
 gi|194142421|gb|EDW58827.1| GJ17468 [Drosophila virilis]
          Length = 881

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 7/100 (7%)

Query: 64  EEFDSTKSGSENHEGASG-DDQEQRPNKKKRYHRH-----TQHQIQEMEAFFKECPHPDD 117
           E+ + T +  +  +  SG DD+ Q  N  K+ HR      T +Q+ E+E  F++  +PD 
Sbjct: 511 EDLNQTNNSEQGEKITSGSDDEGQDENCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 570

Query: 118 KQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
             R+EL+ ++ L  ++V+ WFQN+R + + Q E+ E+ +L
Sbjct: 571 YSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKSESLRL 609


>gi|346974728|gb|EGY18180.1| hypothetical protein VDAG_08514 [Verticillium dahliae VdLs.17]
          Length = 637

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 12/126 (9%)

Query: 98  TQHQIQEMEAFFKECPHPDDKQRKELSREL-GLEPLQVKFWFQNKRTQMK--TQHERHEN 154
           T  Q + + + F + PHPD   R+ LSRE+ GL P QV+ WFQN+R ++K  T  +R   
Sbjct: 174 THQQTRFLMSEFAKQPHPDAAHRERLSREIPGLSPRQVQVWFQNRRAKIKRLTADDRDRM 233

Query: 155 TQLRTENEKLRADNMRYREALSNA----SCPNCGGPTAIGEMSFDEHHLR--LENARLRE 208
            ++R   +    DN++   +   A      P    P   G  ++ +H +R  + + R  E
Sbjct: 234 IKMRAVPDDF--DNVQALHSPYGAVHALGAP-MASPVEFGSSAYTDHMMRPLMVDVRRSE 290

Query: 209 EIDRIS 214
             D +S
Sbjct: 291 AEDHMS 296


>gi|158297213|ref|XP_317481.4| AGAP007985-PA [Anopheles gambiae str. PEST]
 gi|157015086|gb|EAA12409.4| AGAP007985-PA [Anopheles gambiae str. PEST]
          Length = 354

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 4/80 (5%)

Query: 73  SENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLE 130
           S+ H    GDD    P +K+R +R   T  Q++E+E  F    +PD   R+EL+ ++GL 
Sbjct: 62  SDPHSDDGGDDFA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLT 119

Query: 131 PLQVKFWFQNKRTQMKTQHE 150
             +++ WFQN+R + + Q +
Sbjct: 120 EARIQVWFQNRRAKWRKQEK 139


>gi|30841039|ref|NP_035228.2| pituitary homeobox 2 isoform b [Mus musculus]
 gi|6174908|sp|P97474.2|PITX2_MOUSE RecName: Full=Pituitary homeobox 2; AltName: Full=ALL1-responsive
           protein ARP1; AltName: Full=BRX1 homeoprotein; AltName:
           Full=Homeobox protein PITX2; AltName:
           Full=Orthodenticle-like homeobox 2; AltName:
           Full=Paired-like homeodomain transcription factor 2;
           AltName: Full=Paired-like homeodomain transcription
           factor Munc 30; AltName: Full=Solurshin
 gi|1930006|gb|AAC53119.1| pituitary homeobox 2 isoform b [Mus musculus]
 gi|148680297|gb|EDL12244.1| paired-like homeodomain transcription factor 2, isoform CRA_a [Mus
           musculus]
          Length = 317

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 5/114 (4%)

Query: 48  DMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQH----QIQ 103
           D  ++  ES  ++L   +        +  +G + D   + P+KKKR  R   H    Q+Q
Sbjct: 39  DSPKSRKESASSKLFPRQHPGANEKDKGQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQ 98

Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           E+EA F+   +PD   R+E++    L   +V+ WF+N+R + + + ER++  +L
Sbjct: 99  ELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 151


>gi|449281838|gb|EMC88811.1| Retinal homeobox protein Rx2, partial [Columba livia]
          Length = 233

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 55/87 (63%), Gaps = 3/87 (3%)

Query: 84  QEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 141
           +E++P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  ++V+ WFQN+
Sbjct: 30  EEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 89

Query: 142 RTQMKTQHERHENTQLRTENEKLRADN 168
           R + + Q E+ E T ++ ++  + + N
Sbjct: 90  RAKWRRQ-EKLEVTSMKLQDSPILSFN 115


>gi|355559914|gb|EHH16642.1| hypothetical protein EGK_11961 [Macaca mulatta]
          Length = 367

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 74  ENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
           +  E A G + E +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL  
Sbjct: 168 DRKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 227

Query: 132 LQVKFWFQNKRTQMKTQH 149
            +V+ WFQN+R + + Q 
Sbjct: 228 ARVQVWFQNRRAKCRKQE 245


>gi|288557300|ref|NP_001165675.1| ventral anterior homeobox 2b [Xenopus laevis]
 gi|82247682|sp|Q9IAX9.1|VAX2B_XENLA RecName: Full=Ventral anterior homeobox 2b; AltName: Full=Ventral
           anterior homeobox 3
 gi|6707844|gb|AAF25692.1| ventral anterior homeobox 3 [Xenopus laevis]
          Length = 294

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 40/79 (50%)

Query: 91  KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           K+     T  Q+  +E  F+ C +   ++R EL+R+L L   QVK WFQN+RT+ K    
Sbjct: 99  KRTRTSFTAEQLYRLELEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQS 158

Query: 151 RHENTQLRTENEKLRADNM 169
           R    +  + +E     N+
Sbjct: 159 RDSEKRSSSTSESFATCNI 177


>gi|47227473|emb|CAG04621.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 253

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 5/81 (6%)

Query: 81  GDDQEQRPNKKKRYHRHTQH----QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKF 136
            DD    P+KKKR  R   H    Q+QE+EA F+   +PD   R+E++    L   +V+ 
Sbjct: 9   NDDSSDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRV 68

Query: 137 WFQNKRTQMKTQHERHENTQL 157
           WF+N+R + + + ER++  +L
Sbjct: 69  WFKNRRAKWR-KRERNQQAEL 88


>gi|410914305|ref|XP_003970628.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Takifugu rubripes]
          Length = 268

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 5/81 (6%)

Query: 81  GDDQEQRPNKKKRYHRHTQH----QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKF 136
            DD    P+KKKR  R   H    Q+QE+EA F+   +PD   R+E++    L   +V+ 
Sbjct: 24  NDDSSDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRV 83

Query: 137 WFQNKRTQMKTQHERHENTQL 157
           WF+N+R + + + ER++  +L
Sbjct: 84  WFKNRRAKWR-KRERNQQAEL 103


>gi|5668951|gb|AAD46097.1|AF077092_1 pituitary homeobox protein 2 [Gallus gallus]
          Length = 271

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 5/88 (5%)

Query: 74  ENHEGASGDDQEQRPNKKKRYHRHTQH----QIQEMEAFFKECPHPDDKQRKELSRELGL 129
           ++ +G S D   + P+KKKR  R   H    Q+QE+EA F+   +PD   R+E++    L
Sbjct: 19  KSQQGKSEDAGPEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 78

Query: 130 EPLQVKFWFQNKRTQMKTQHERHENTQL 157
              +V+ WF+N+R + + + ER++  +L
Sbjct: 79  TEARVRVWFKNRRAKWR-KRERNQQAEL 105


>gi|4512222|dbj|BAA75248.1| Brx1b homeoprotein [Mus musculus]
          Length = 317

 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 5/114 (4%)

Query: 48  DMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQH----QIQ 103
           D  ++  ES  ++L   +        +  +G + D   + P+KKKR  R   H    Q+Q
Sbjct: 39  DSPKSRKESASSKLFPRQHPGANEKDKGQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQ 98

Query: 104 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           E+EA F+   +PD   R+E++    L   +V+ WF+N+R + + + ER++  +L
Sbjct: 99  ELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 151


>gi|84619797|gb|ABC59245.1| engrailed-1 [Ephemera vulgata]
          Length = 94

 Score = 52.8 bits (125), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 43/63 (68%)

Query: 84  QEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRT 143
           +E+RP++K+     TQ Q+  ++  F+E  +  +++R++L+ +LGL   Q+K WFQNKR 
Sbjct: 19  RERRPDEKRPRTAFTQEQLGRLKREFEENRYLTERRRQQLATDLGLHENQIKIWFQNKRA 78

Query: 144 QMK 146
           ++K
Sbjct: 79  KIK 81


>gi|187608131|ref|NP_001119883.1| short stature homeobox protein isoform 1 [Danio rerio]
          Length = 285

 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 10/111 (9%)

Query: 46  PLDMTQNTSESEIARLREEEFDSTKSG------SENHEGASGDDQEQRPNKKKRYHR--H 97
           P+ + +   E E  +L+E  F  T++        +  E    +D++ +   K+R  R   
Sbjct: 59  PVHLYKEHVELEKEKLKE--FSVTRASDGIYDCKDKKEDVKSEDEDAQSKLKQRRSRTNF 116

Query: 98  TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           T  Q+ E+E  F E  +PD   R+ELS+ LGL   +V+ WFQN+R + + Q
Sbjct: 117 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 167


>gi|403275548|ref|XP_003929502.1| PREDICTED: pituitary homeobox 2 isoform 2 [Saimiri boliviensis
           boliviensis]
 gi|403275552|ref|XP_003929504.1| PREDICTED: pituitary homeobox 2 isoform 4 [Saimiri boliviensis
           boliviensis]
 gi|426231271|ref|XP_004009663.1| PREDICTED: pituitary homeobox 2 isoform 2 [Ovis aries]
          Length = 317

 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 15/108 (13%)

Query: 64  EEFDSTKSGSENHEGASGDDQEQR----------PNKKKRYHRHTQH----QIQEMEAFF 109
           +E  S+K     H GA+  D+ Q+          P+KKKR  R   H    Q+QE+EA F
Sbjct: 45  KEAASSKLFPRQHPGANEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATF 104

Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           +   +PD   R+E++    L   +V+ WF+N+R + + + ER++  +L
Sbjct: 105 QRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 151


>gi|410957013|ref|XP_003985129.1| PREDICTED: pituitary homeobox 2 isoform 6 [Felis catus]
          Length = 304

 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 15/108 (13%)

Query: 64  EEFDSTKSGSENHEGASGDDQEQR----------PNKKKRYHRHTQH----QIQEMEAFF 109
           +E  S+K     H GA+  D+ Q+          P+KKKR  R   H    Q+QE+EA F
Sbjct: 32  KEAASSKLFPRQHPGATEKDKSQQGKNEDVGPEDPSKKKRQRRQRTHFTSQQLQELEATF 91

Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           +   +PD   R+E++    L   +V+ WF+N+R + + + ER++  +L
Sbjct: 92  QRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 138


>gi|402883438|ref|XP_003905225.1| PREDICTED: visual system homeobox 1 isoform 3 [Papio anubis]
          Length = 301

 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 51  QNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRP---NKKKRYHR--HTQHQIQEM 105
           Q  S    A  R++  +S  +  E+      +D +  P    +KKR HR   T HQ++E+
Sbjct: 120 QAPSRQPPALGRQKRSESVSTSDEDSPSEDRNDLKASPTLGKRKKRRHRTVFTAHQLEEL 179

Query: 106 EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTE 160
           E  F E  +PD   R+ L+ +  L   +++ WFQN+R + + + +R   + +  E
Sbjct: 180 EKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAE 234


>gi|268581123|ref|XP_002645544.1| C. briggsae CBR-CEH-28 protein [Caenorhabditis briggsae]
          Length = 191

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 10/124 (8%)

Query: 32  TLSQPTNMMEGQLHPLDMTQNTSESEIARLREEE-------FDSTKSGSENHEGASGDDQ 84
           +LS   N+ EG         N  +  +  ++ +        +  T   S  H GA+ +  
Sbjct: 31  SLSSRINLFEGFDQSFSELANPYQPAMPLMQRDTLLGANSYYSKTYDQSHGH-GANNETI 89

Query: 85  EQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKR 142
             R  ++KR  R   TQ+Q+ E+E  FK+  +    +R+EL++ LGL   QVK WFQN+R
Sbjct: 90  HLRSQQQKRKPRVLFTQNQVNELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQNRR 149

Query: 143 TQMK 146
            + K
Sbjct: 150 YKCK 153


>gi|344308172|ref|XP_003422752.1| PREDICTED: short stature homeobox protein-like [Loxodonta africana]
          Length = 291

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 13/136 (9%)

Query: 24  GLGSSSGLTLSQPT--NMMEGQLH-PLDMTQNTSESEIARLREEEFDSTKSG------SE 74
           GL  S  L  S+    ++ EG  H P+ + ++  +++  +L+E  F + +         E
Sbjct: 41  GLARSRELGSSEANLQDITEGSGHCPVHLFKDHVDTDKDKLKE--FGTGRGAEGVYECKE 98

Query: 75  NHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPL 132
             E    +D++ +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL   
Sbjct: 99  KREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 158

Query: 133 QVKFWFQNKRTQMKTQ 148
           +V+ WFQN+R + + Q
Sbjct: 159 RVQVWFQNRRAKCRKQ 174


>gi|291400068|ref|XP_002716329.1| PREDICTED: short stature homeobox 2-like [Oryctolagus cuniculus]
          Length = 238

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 73  SENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLE 130
            +  E A G + E +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL 
Sbjct: 28  KDRKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLS 87

Query: 131 PLQVKFWFQNKRTQMKTQ 148
             +V+ WFQN+R + + Q
Sbjct: 88  EARVQVWFQNRRAKCRKQ 105


>gi|50553148|ref|XP_503984.1| YALI0E15510p [Yarrowia lipolytica]
 gi|49649853|emb|CAG79577.1| YALI0E15510p [Yarrowia lipolytica CLIB122]
          Length = 243

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)

Query: 86  QRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 145
           Q P  K+R  R T +Q+  +   F++   P  +QR +L++EL + P  V+ WFQNKR   
Sbjct: 175 QTPKPKRR--RATSYQVARLNEVFEQTFFPSSEQRLDLAKELNMTPRVVQIWFQNKRQGW 232

Query: 146 KTQHER 151
           K++H+R
Sbjct: 233 KSEHKR 238


>gi|311245261|ref|XP_003121760.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx-like
           [Sus scrofa]
          Length = 348

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 53/83 (63%), Gaps = 3/83 (3%)

Query: 84  QEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 141
           +E++P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  ++V+ WFQN+
Sbjct: 129 EEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 188

Query: 142 RTQMKTQHERHENTQLRTENEKL 164
           R + + Q E+ E + ++ ++  L
Sbjct: 189 RAKWRRQ-EKLEVSSMKLQDSPL 210


>gi|301618062|ref|XP_002938442.1| PREDICTED: ventral anterior homeobox 2a-like [Xenopus (Silurana)
           tropicalis]
          Length = 299

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 40/79 (50%)

Query: 91  KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           K+     T  Q+  +E  F+ C +   ++R EL+R+L L   QVK WFQN+RT+ K    
Sbjct: 103 KRTRTSFTAEQLYRLELEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQS 162

Query: 151 RHENTQLRTENEKLRADNM 169
           R    +  + +E     N+
Sbjct: 163 RDSEKRSSSTSESFATCNI 181


>gi|148677730|gb|EDL09677.1| retina and anterior neural fold homeobox, isoform CRA_b [Mus
           musculus]
          Length = 379

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 56/91 (61%), Gaps = 6/91 (6%)

Query: 79  ASGDD---QEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
           A+GD    +E+ P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  ++
Sbjct: 157 AAGDSKLSEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 216

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
           V+ WFQN+R + + Q E+ E + ++ ++  L
Sbjct: 217 VQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPL 246


>gi|109149547|ref|XP_001112939.1| PREDICTED: short stature homeobox protein-like, partial [Macaca
           mulatta]
          Length = 213

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 3/92 (3%)

Query: 73  SENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLE 130
            E  E    +D++ +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL 
Sbjct: 100 KEKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLS 159

Query: 131 PLQVKFWFQNKRTQMKTQ-HERHENTQLRTEN 161
             +V+ WFQN+R + + Q ++ H+   L T N
Sbjct: 160 EARVQVWFQNRRAKCRKQENQMHKGVILGTAN 191


>gi|397519875|ref|XP_003830078.1| PREDICTED: pituitary homeobox 2 isoform 4 [Pan paniscus]
          Length = 304

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 15/108 (13%)

Query: 64  EEFDSTKSGSENHEGASGDDQEQR----------PNKKKRYHRHTQH----QIQEMEAFF 109
           +E  S+K     H GA+  D+ Q+          P+KKKR  R   H    Q+QE+EA F
Sbjct: 32  KEAASSKFFPRQHPGANEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATF 91

Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           +   +PD   R+E++    L   +V+ WF+N+R + + + ER++  +L
Sbjct: 92  QRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 138


>gi|358418744|ref|XP_003584036.1| PREDICTED: retinal homeobox protein Rx-like [Bos taurus]
          Length = 352

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 56/91 (61%), Gaps = 6/91 (6%)

Query: 79  ASGDD---QEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
           A GD    +E++P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  ++
Sbjct: 121 APGDSKLLEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 180

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
           V+ WFQN+R + + Q E+ E + ++ ++  L
Sbjct: 181 VQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPL 210


>gi|291401268|ref|XP_002717161.1| PREDICTED: paired-like homeodomain 1 isoform 1 [Oryctolagus
           cuniculus]
          Length = 317

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 15/108 (13%)

Query: 64  EEFDSTKSGSENHEGASGDDQEQR----------PNKKKRYHRHTQH----QIQEMEAFF 109
           +E  S+K     H GA+  D+ Q+          P+KKKR  R   H    Q+QE+EA F
Sbjct: 45  KEAASSKLFPRQHPGANEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATF 104

Query: 110 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQL 157
           +   +PD   R+E++    L   +V+ WF+N+R + + + ER++  +L
Sbjct: 105 QRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAEL 151


>gi|18202262|sp|O97039.1|RX_DUGJA RecName: Full=Retinal homeobox protein Rax; AltName: Full=DjRax
 gi|4519627|dbj|BAA75673.1| Djrax [Dugesia japonica]
          Length = 268

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)

Query: 58  IARLREEEFDSTKSGSENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHP 115
           + R  ++  + + + SE  E  S  DQ    NKK R +R   T +Q+ E+E  F++  +P
Sbjct: 53  VKRCPKDSSEQSPAISEADETESSPDQLSNCNKKHRRNRTTFTTYQLHELERAFEKSHYP 112

Query: 116 DDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHE 150
           D   R+EL+ ++ L  ++V+ WFQN+R + + Q +
Sbjct: 113 DVYSREELAMKISLPEVRVQVWFQNRRAKWRRQEK 147


>gi|348528188|ref|XP_003451600.1| PREDICTED: short stature homeobox protein-like isoform 1
           [Oreochromis niloticus]
          Length = 285

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 10/111 (9%)

Query: 46  PLDMTQNTSESEIARLREEEFDSTKSG------SENHEGASGDDQEQRPNKKKRYHR--H 97
           P+ + ++  E E  +L++  F+ T++        E  E    +D++ +   K+R  R   
Sbjct: 57  PVHLFKDHVELEKEKLKD--FNVTRATEGIYECKEKKEDVKSEDEDAQGKLKQRRSRTNF 114

Query: 98  TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQ 148
           T  Q+ E+E  F E  +PD   R+ELS+ LGL   +V+ WFQN+R + + Q
Sbjct: 115 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 165


>gi|224096942|ref|XP_002310795.1| predicted protein [Populus trichocarpa]
 gi|222853698|gb|EEE91245.1| predicted protein [Populus trichocarpa]
          Length = 204

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 7/93 (7%)

Query: 93  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERH 152
           R  +  + Q+  +E  F      + +++ +L+ ELGL+P QV  WFQN+R + K +    
Sbjct: 48  RKRKLNEEQVNLLEMNFGNEHKLESERKDKLASELGLDPRQVAVWFQNRRARWKNKKLEE 107

Query: 153 ENTQLRTENE-------KLRADNMRYREALSNA 178
           E T+L+T +E       +L ++ ++ +E LS A
Sbjct: 108 EYTKLKTSHENIVVEKCQLESEVLKLKEQLSEA 140


>gi|358349012|ref|XP_003638534.1| Homeobox-leucine zipper protein HDG12 [Medicago truncatula]
 gi|355504469|gb|AES85672.1| Homeobox-leucine zipper protein HDG12 [Medicago truncatula]
          Length = 52

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 37/49 (75%)

Query: 715 GGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCESA 763
           G SL+TVAFQI+V S+ +AKL++ SV TVN LI  TV+ I  +LSC S+
Sbjct: 4   GRSLITVAFQIMVSSLRSAKLNMESVTTVNGLIGETVQHINVALSCPSS 52


>gi|359079339|ref|XP_003587831.1| PREDICTED: retinal homeobox protein Rx-like [Bos taurus]
          Length = 352

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 56/91 (61%), Gaps = 6/91 (6%)

Query: 79  ASGDD---QEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 133
           A GD    +E++P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  ++
Sbjct: 121 APGDSKLLEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 180

Query: 134 VKFWFQNKRTQMKTQHERHENTQLRTENEKL 164
           V+ WFQN+R + + Q E+ E + ++ ++  L
Sbjct: 181 VQVWFQNRRAKWRRQ-EKLEVSSMKLQDXPL 210


>gi|187609463|sp|A3BYC1.2|HOX25_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX25; AltName:
           Full=HD-ZIP protein HOX25; AltName: Full=Homeodomain
           transcription factor HOX25; AltName: Full=OsHox25
          Length = 320

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 1/87 (1%)

Query: 81  GDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRK-ELSRELGLEPLQVKFWFQ 139
           G D++   +   R  R T  Q++ +E  F+E     + +RK EL+R LG+ P QV  WFQ
Sbjct: 70  GVDEQGSSSAAARKRRLTAEQVRALERSFEEEKRKLEPERKSELARRLGIAPRQVAVWFQ 129

Query: 140 NKRTQMKTQHERHENTQLRTENEKLRA 166
           N+R + KT+    +  +LR  +++L A
Sbjct: 130 NRRARWKTKQLELDFDRLRAAHDELLA 156


>gi|329664954|ref|NP_001192456.1| short stature homeobox protein 2 [Bos taurus]
 gi|296491160|tpg|DAA33233.1| TPA: short stature homeobox 2-like isoform 2 [Bos taurus]
          Length = 358

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 74  ENHEGASGDDQEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 131
           +  E A G + E +   K+R  R   T  Q+ E+E  F E  +PD   R+ELS+ LGL  
Sbjct: 149 DRKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 208

Query: 132 LQVKFWFQNKRTQMKTQH 149
            +V+ WFQN+R + + Q 
Sbjct: 209 ARVQVWFQNRRAKCRKQE 226


>gi|414586065|tpg|DAA36636.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 261

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 3/77 (3%)

Query: 92  KRYHRHTQHQIQEMEAFFKECPHP--DDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 149
           +R  R T+ QI+ +E+ F    H   + +++ EL+RELGL+P QV  WFQNKR + +++ 
Sbjct: 55  ERKRRFTEEQIRSLESMFH-AHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQ 113

Query: 150 ERHENTQLRTENEKLRA 166
             H+   LR + + L A
Sbjct: 114 LEHDYALLRAKFDDLHA 130


>gi|402903228|ref|XP_003914478.1| PREDICTED: retinal homeobox protein Rx [Papio anubis]
          Length = 386

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 53/83 (63%), Gaps = 3/83 (3%)

Query: 84  QEQRPNKKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 141
           +E++P KK R +R   T +Q+ E+E  F++  +PD   R+EL+ ++ L  ++V+ WFQN+
Sbjct: 167 EEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 226

Query: 142 RTQMKTQHERHENTQLRTENEKL 164
           R + + Q E+ E + ++ ++  L
Sbjct: 227 RAKWRRQ-EKLEVSSMKLQDSPL 248


>gi|358248872|ref|NP_001240210.1| uncharacterized protein LOC100813420 [Glycine max]
 gi|255635463|gb|ACU18084.1| unknown [Glycine max]
          Length = 284

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 17/106 (16%)

Query: 84  QEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRT 143
           ++Q P KK   HR +  Q+  +E  F+E    + +++ +L+++LGL+P QV  WFQN+R 
Sbjct: 59  EKQSPEKK---HRLSSEQVHLLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRA 115

Query: 144 QMKTQHERHENTQLRT--------------ENEKLRADNMRYREAL 175
           + KT+    +   L++              ENEKL+++ +   E L
Sbjct: 116 RWKTKQLERDYDVLKSSYDTLLSSYDSIMKENEKLKSEVVSLNEKL 161


>gi|426391205|ref|XP_004061971.1| PREDICTED: visual system homeobox 1 isoform 4 [Gorilla gorilla
           gorilla]
          Length = 280

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 5/104 (4%)

Query: 62  REEEFDSTKSGSENHEGASGDDQEQRP---NKKKRYHR--HTQHQIQEMEAFFKECPHPD 116
           R++  +S  +  E+ +    +D +  P    +KKR HR   T HQ++E+E  F E  +PD
Sbjct: 131 RQKRSESVSTSDEDSQSEDRNDLKASPTSGKRKKRRHRTVFTAHQLEELEKAFSEAHYPD 190

Query: 117 DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTE 160
              R+ L+ +  L   +++ WFQN+R + + + +R   + +  E
Sbjct: 191 VYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAE 234


>gi|212535846|ref|XP_002148079.1| homeobox transcription factor, putative [Talaromyces marneffei ATCC
           18224]
 gi|210070478|gb|EEA24568.1| homeobox transcription factor, putative [Talaromyces marneffei ATCC
           18224]
          Length = 545

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 4/84 (4%)

Query: 64  EEFDSTKSGSENHEGASGDDQEQRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKEL 123
           E+F + + G      ++GD+   +  K KR+ R T +Q + + + F    HPD   R+ L
Sbjct: 154 EDFSNGEEGEGGQGRSAGDEDNSK--KTKRF-RLTHNQTRFLMSEFTRQAHPDAAHRERL 210

Query: 124 SREL-GLEPLQVKFWFQNKRTQMK 146
           SRE+ GL P QV+ WFQN+R ++K
Sbjct: 211 SREIPGLSPRQVQVWFQNRRAKLK 234


>gi|194770706|ref|XP_001967430.1| GF21877 [Drosophila ananassae]
 gi|190618406|gb|EDV33930.1| GF21877 [Drosophila ananassae]
          Length = 545

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 7/132 (5%)

Query: 32  TLSQPTNMMEGQLHPLDMTQNTSESEIARLREEEFDSTKSGSENHEGASGDDQEQRPNKK 91
           T++ PTN+  G ++  D+ +   +           DST  G  +H  +  +D + R   K
Sbjct: 204 TVATPTNL-SGPINREDIQKRELQYSTDVSHTNSHDSTSDGISDHNSSCDEDSQMRLRLK 262

Query: 92  KRYHRH----TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 147
           ++  R+    T  QI  +E  F+   +PD   R+ L+ ++GL   +++ WF N+R   K 
Sbjct: 263 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRA--KW 320

Query: 148 QHERHENTQLRT 159
           + E    TQ R+
Sbjct: 321 RREEKMRTQRRS 332


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.316    0.131    0.387 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,303,407,729
Number of Sequences: 23463169
Number of extensions: 536061868
Number of successful extensions: 1588962
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10489
Number of HSP's successfully gapped in prelim test: 3266
Number of HSP's that attempted gapping in prelim test: 1570790
Number of HSP's gapped (non-prelim): 17073
length of query: 763
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 612
effective length of database: 8,816,256,848
effective search space: 5395549190976
effective search space used: 5395549190976
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)