RAD5 protein (Arabidopsis thaliana)

STRING 9.05

RAD5 protein (Arabidopsis thaliana) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	RAD5	RAD5; ATP binding / ATP-dependent helicase/ DNA binding / helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / protein binding / zinc ion binding; DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer ; Possesses intrinsic ATP-dependent nucleosome-remodeling activity. This activity may be required for DNA repair (By similarity) (1029 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	UVH1	UVH1 (ULTRAVIOLET HYPERSENSITIVE 1); single-stranded DNA specific endodeoxyribonuclease; Confer [...] (956 aa)		•	•	0.693
	ATRAD51	ATRAD51; ATP binding / DNA binding / DNA-dependent ATPase/ damaged DNA binding / nucleoside-tri [...] (342 aa)		•	•	0.678
	UBC13	UBC13 (ubiquitin-conjugating enzyme 13); ubiquitin-protein ligase; ubiquitin-conjugating enzyme [...] (166 aa)			•	0.655
	AT3G19120	unknown protein; unknown protein; LOCATED IN- chloroplast; EXPRESSED IN- 16 plant structures; E [...] (446 aa)			•	0.599
	RAD50	RAD50; ATP binding / nuclease/ zinc ion binding; RAD50; FUNCTIONS IN- zinc ion binding, ATP bin [...] (1316 aa)			•	0.596
	MUS81	MUS81 (MMS AND UV SENSITIVE 81); endonuclease/ nucleic acid binding; Encodes an Arabidopsis hom [...] (659 aa)			•	0.593
	RECQ4A	RECQ4A; ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding; DNA helicase invo [...] (1188 aa)	•		•	0.587
	PCNA1	PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN); DNA binding / DNA polymerase processivity facto [...] (263 aa)	•	•	•	0.547
	AT4G17760	damaged DNA binding / exodeoxyribonuclease III; damaged DNA binding / exodeoxyribonuclease III; [...] (300 aa)			•	0.504
	APC11	APC11; protein binding / ubiquitin-protein ligase/ zinc ion binding; Subunit of the anaphase pr [...] (57 aa)			•	0.468

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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