Query 004296
Match_columns 763
No_of_seqs 411 out of 3092
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 20:39:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004296.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004296hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d2f_A Heat shock protein homo 100.0 2E-111 6E-116 979.6 70.1 649 1-701 2-653 (675)
2 4b9q_A Chaperone protein DNAK; 100.0 1.6E-98 5E-103 866.0 66.9 590 1-674 1-604 (605)
3 2kho_A Heat shock protein 70; 100.0 2.3E-97 8E-102 856.3 57.8 589 2-674 3-604 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 1.7E-91 5.6E-96 800.2 47.9 542 2-615 5-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 4.4E-81 1.5E-85 708.9 50.4 499 2-605 3-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 1.1E-64 3.6E-69 561.3 41.8 380 1-382 23-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 4.5E-63 1.5E-67 546.8 41.8 374 3-381 20-394 (394)
8 4gni_A Putative heat shock pro 100.0 3.5E-63 1.2E-67 549.7 37.8 378 1-383 13-404 (409)
9 1dkg_D Molecular chaperone DNA 100.0 4.1E-61 1.4E-65 528.7 38.1 372 2-381 3-383 (383)
10 1jce_A ROD shape-determining p 100.0 8.4E-41 2.9E-45 361.4 23.4 309 2-381 4-327 (344)
11 4e81_A Chaperone protein DNAK; 100.0 7.4E-33 2.5E-37 274.4 25.0 211 390-674 2-216 (219)
12 1u00_A HSC66, chaperone protei 100.0 2.3E-31 7.8E-36 266.7 27.6 211 392-676 1-215 (227)
13 2fsj_A Hypothetical protein TA 100.0 1.7E-28 6E-33 263.7 13.4 227 112-378 95-343 (346)
14 2ych_A Competence protein PILM 99.9 1.3E-27 4.4E-32 261.5 15.3 305 3-367 15-341 (377)
15 3h1q_A Ethanolamine utilizatio 99.9 1.3E-25 4.6E-30 234.0 20.8 202 116-377 71-272 (272)
16 3n8e_A Stress-70 protein, mito 99.9 3.9E-26 1.3E-30 218.3 15.1 160 387-615 18-181 (182)
17 4a2a_A Cell division protein F 99.9 1.9E-24 6.5E-29 237.2 23.1 199 151-380 168-394 (419)
18 1k8k_A ARP3, actin-like protei 99.9 1.4E-24 4.7E-29 240.5 18.5 227 137-379 107-387 (418)
19 2fxu_A Alpha-actin-1, actin, a 99.9 1.7E-24 5.9E-29 235.9 15.6 213 138-378 101-348 (375)
20 3h0x_A 78 kDa glucose-regulate 99.9 1.1E-22 3.9E-27 189.5 16.2 147 391-605 2-152 (152)
21 3dob_A Heat shock 70 kDa prote 99.9 1.4E-22 4.9E-27 188.4 13.7 147 391-605 2-152 (152)
22 3dqg_A Heat shock 70 kDa prote 99.9 1.6E-22 5.6E-27 187.8 11.7 146 391-605 2-151 (151)
23 2zgy_A Plasmid segregation pro 99.9 1.9E-22 6.6E-27 214.9 13.6 227 110-377 72-319 (320)
24 2op6_A Heat shock 70 kDa prote 99.9 2.6E-21 8.9E-26 181.6 14.9 147 391-605 2-152 (152)
25 4ehu_A Activator of 2-hydroxyi 99.8 1.1E-18 3.9E-23 181.8 14.9 186 162-381 68-256 (276)
26 1k8k_B ARP2, actin-like protei 99.8 4.6E-20 1.6E-24 202.0 1.8 214 138-379 105-364 (394)
27 3js6_A Uncharacterized PARM pr 99.7 5.1E-17 1.7E-21 174.3 15.2 208 138-382 114-339 (355)
28 1q5l_A Chaperone protein DNAK; 99.6 6.9E-15 2.4E-19 134.0 11.7 101 386-495 14-118 (135)
29 4apw_A ALP12; actin-like prote 99.6 4.4E-16 1.5E-20 165.8 3.7 203 138-379 106-324 (329)
30 3dwl_A Actin-related protein 3 99.4 2.9E-13 9.9E-18 148.4 10.0 222 138-378 124-395 (427)
31 3qb0_A Actin-related protein 4 99.4 1.6E-12 5.3E-17 144.0 13.0 178 2-244 24-209 (498)
32 3lof_A Heat shock 70 kDa prote 99.3 2.3E-11 8E-16 107.4 10.6 82 593-675 3-85 (113)
33 2d0o_A DIOL dehydratase-reacti 99.2 1.6E-11 5.5E-16 132.2 8.9 197 150-379 367-604 (610)
34 4fo0_A Actin-related protein 8 99.2 3.4E-10 1.2E-14 130.8 19.1 108 124-244 179-293 (593)
35 1nbw_A Glycerol dehydratase re 99.2 2.8E-11 9.6E-16 130.9 7.1 193 152-377 371-604 (607)
36 2p32_A Heat shock 70 kDa prote 99.0 4.2E-10 1.4E-14 100.3 6.2 80 594-674 13-93 (120)
37 1ud0_A HSC70, 70 kDa heat-shoc 98.9 6.9E-10 2.4E-14 98.1 4.3 77 597-674 2-79 (113)
38 1hux_A Activator of (R)-2-hydr 98.8 7E-07 2.4E-11 91.7 21.6 48 333-380 210-257 (270)
39 4am6_A Actin-like protein ARP8 97.9 3.6E-05 1.2E-09 86.1 10.0 121 138-279 222-347 (655)
40 2ews_A Pantothenate kinase; PA 97.3 0.003 1E-07 64.5 14.2 75 298-377 207-286 (287)
41 2ivn_A O-sialoglycoprotein end 97.1 0.063 2.1E-06 56.3 22.9 64 311-379 229-298 (330)
42 2i7n_A Pantothenate kinase 1; 96.7 0.0098 3.3E-07 62.4 11.9 69 304-377 279-358 (360)
43 3lof_A Heat shock 70 kDa prote 96.7 0.0067 2.3E-07 52.8 8.8 73 674-758 3-81 (113)
44 3jvp_A Ribulokinase; PSI-II, N 96.5 0.022 7.5E-07 64.7 14.6 79 299-382 410-490 (572)
45 1t6c_A Exopolyphosphatase; alp 96.4 0.023 8E-07 59.1 12.4 78 153-238 100-177 (315)
46 3eno_A Putative O-sialoglycopr 96.2 0.14 4.7E-06 53.7 17.5 67 310-381 233-305 (334)
47 3vgl_A Glucokinase; ROK family 96.2 0.31 1E-05 50.7 20.0 45 163-212 96-140 (321)
48 2e2o_A Hexokinase; acetate and 96.2 0.51 1.7E-05 48.4 21.5 48 331-379 239-287 (299)
49 2ch5_A NAGK protein; transfera 96.1 1.5 5.3E-05 45.7 25.5 61 136-206 70-133 (347)
50 3l0q_A Xylulose kinase; xlylul 96.1 0.0058 2E-07 69.2 6.8 84 297-384 408-494 (554)
51 3vov_A Glucokinase, hexokinase 96.1 0.53 1.8E-05 48.4 20.9 44 163-211 98-141 (302)
52 3i8b_A Xylulose kinase; strain 95.9 0.0092 3.2E-07 66.8 7.1 79 299-382 395-474 (515)
53 4db3_A Glcnac kinase, N-acetyl 95.9 0.53 1.8E-05 49.0 20.4 44 163-211 120-163 (327)
54 4bc3_A Xylulose kinase; transf 95.9 0.0091 3.1E-07 67.3 6.7 76 305-381 408-483 (538)
55 3hz6_A Xylulokinase; xylulose, 95.8 0.01 3.5E-07 66.4 6.9 80 299-384 375-455 (511)
56 2itm_A Xylulose kinase, xylulo 95.7 0.0085 2.9E-07 66.7 5.7 53 331-383 386-438 (484)
57 3ll3_A Gluconate kinase; xylul 95.7 0.012 4.1E-07 65.7 6.8 53 331-384 393-445 (504)
58 3ezw_A Glycerol kinase; glycer 95.7 0.011 3.9E-07 66.3 6.5 83 298-384 371-454 (526)
59 2zf5_O Glycerol kinase; hypert 95.7 0.013 4.6E-07 65.3 7.0 80 299-383 365-444 (497)
60 3ifr_A Carbohydrate kinase, FG 95.6 0.016 5.3E-07 64.9 7.4 81 299-384 371-452 (508)
61 3g25_A Glycerol kinase; IDP007 95.5 0.018 6.2E-07 64.3 7.2 82 299-384 374-456 (501)
62 3h3n_X Glycerol kinase; ATP-bi 95.5 0.02 6.7E-07 64.1 7.4 83 298-384 372-455 (506)
63 3r8e_A Hypothetical sugar kina 95.5 0.076 2.6E-06 55.4 11.5 45 162-211 116-161 (321)
64 2gup_A ROK family protein; sug 95.2 1.5 5E-05 44.7 20.4 42 163-211 94-135 (292)
65 4htl_A Beta-glucoside kinase; 95.2 0.45 1.5E-05 48.8 16.5 49 331-379 237-291 (297)
66 4e1j_A Glycerol kinase; struct 95.1 0.02 7E-07 64.1 6.2 53 331-384 425-477 (520)
67 2p3r_A Glycerol kinase; glycer 95.1 0.024 8.1E-07 63.5 6.7 81 299-383 371-452 (510)
68 2d4w_A Glycerol kinase; alpha 94.9 0.028 9.6E-07 62.8 6.4 81 299-383 373-454 (504)
69 2qm1_A Glucokinase; alpha-beta 94.8 1.2 4.2E-05 46.0 18.8 44 163-211 108-151 (326)
70 2dpn_A Glycerol kinase; thermu 94.8 0.032 1.1E-06 62.2 6.5 80 299-382 368-448 (495)
71 2uyt_A Rhamnulokinase; rhamnos 94.5 0.047 1.6E-06 60.7 7.1 78 297-379 361-439 (489)
72 2w40_A Glycerol kinase, putati 94.4 0.05 1.7E-06 60.7 6.9 81 299-383 376-458 (503)
73 2p32_A Heat shock 70 kDa prote 94.2 0.1 3.5E-06 45.7 7.2 70 677-758 15-90 (120)
74 4e81_A Chaperone protein DNAK; 94.0 0.27 9.2E-06 48.0 10.3 46 698-758 168-213 (219)
75 2hoe_A N-acetylglucosamine kin 93.8 1.6 5.3E-05 46.5 17.0 42 163-211 188-229 (380)
76 2ap1_A Putative regulator prot 93.8 2.3 7.7E-05 44.1 17.9 44 163-211 120-163 (327)
77 1z6r_A MLC protein; transcript 93.0 3.1 0.0001 44.6 17.9 44 163-211 186-229 (406)
78 3h6e_A Carbohydrate kinase, FG 91.9 0.13 4.6E-06 56.7 5.2 71 305-380 363-436 (482)
79 3en9_A Glycoprotease, O-sialog 91.4 18 0.00062 40.1 22.3 183 136-355 72-272 (540)
80 1ud0_A HSC70, 70 kDa heat-shoc 91.2 0.15 5.3E-06 44.0 3.9 64 683-758 7-76 (113)
81 1u00_A HSC66, chaperone protei 91.1 1.1 3.7E-05 43.9 10.4 46 697-757 164-209 (227)
82 3mdq_A Exopolyphosphatase; str 90.3 0.35 1.2E-05 50.2 6.3 78 154-238 93-170 (315)
83 3cer_A Possible exopolyphospha 90.0 1.1 3.8E-05 46.8 10.0 80 154-238 106-191 (343)
84 3d2f_A Heat shock protein homo 89.8 0.73 2.5E-05 53.1 9.0 70 678-758 549-623 (675)
85 1u6z_A Exopolyphosphatase; alp 88.3 1.2 4E-05 49.5 9.0 75 155-238 101-176 (513)
86 4b9q_A Chaperone protein DNAK; 85.8 3.1 0.00011 47.2 11.0 47 698-759 556-602 (605)
87 1iv0_A Hypothetical protein; r 84.9 0.63 2.1E-05 38.9 3.4 21 1-21 1-21 (98)
88 3o8m_A Hexokinase; rnaseh-like 84.5 8.3 0.00028 42.1 13.0 58 149-213 184-243 (485)
89 2kho_A Heat shock protein 70; 84.5 2 6.9E-05 48.8 8.6 47 697-758 555-601 (605)
90 3hi0_A Putative exopolyphospha 83.9 2.5 8.5E-05 46.8 8.7 75 153-237 103-178 (508)
91 3ven_A O-carbamoyltransferase 80.1 18 0.00061 40.2 13.7 66 312-382 293-360 (576)
92 1woq_A Inorganic polyphosphate 79.9 31 0.0011 34.1 14.6 45 163-211 114-158 (267)
93 1vhx_A Putative holliday junct 78.7 1.1 3.8E-05 40.7 2.9 21 1-21 3-23 (150)
94 3aap_A Ectonucleoside triphosp 78.5 2.3 7.8E-05 44.6 5.7 19 193-211 139-157 (353)
95 2yhx_A Hexokinase B; transfera 78.4 8.8 0.0003 41.6 10.4 56 151-213 164-221 (457)
96 3epq_A Putative fructokinase; 77.6 17 0.00058 36.9 12.0 51 153-211 90-140 (302)
97 4g9i_A Hydrogenase maturation 74.5 4.8 0.00016 46.7 7.4 63 314-381 693-761 (772)
98 1z05_A Transcriptional regulat 70.1 40 0.0014 36.1 13.2 44 163-211 208-251 (429)
99 3ttc_A HYPF, transcriptional r 68.0 7.5 0.00026 44.0 6.9 49 331-379 599-651 (657)
100 2odv_A Plectin 1, HD1; plakin 67.8 92 0.0031 30.2 14.2 44 572-617 41-84 (235)
101 3cj1_A Ectonucleoside triphosp 66.6 7.7 0.00027 42.0 6.5 20 193-212 189-208 (456)
102 1hjr_A Holliday junction resol 65.6 6 0.00021 36.1 4.5 19 1-19 1-19 (158)
103 1bdg_A Hexokinase; phosphotran 65.1 8.7 0.0003 41.6 6.5 62 144-212 166-229 (451)
104 1nbw_A Glycerol dehydratase re 64.8 20 0.00069 39.4 9.1 44 138-181 131-175 (607)
105 1nu0_A Hypothetical protein YQ 64.1 5.1 0.00017 35.7 3.6 21 2-22 4-24 (138)
106 3cqy_A Anhydro-N-acetylmuramic 63.8 9.9 0.00034 39.7 6.3 69 305-379 267-342 (370)
107 3qbx_A Anhydro-N-acetylmuramic 63.5 12 0.00041 39.0 6.9 69 306-379 261-336 (371)
108 4ep4_A Crossover junction endo 63.1 5 0.00017 36.9 3.5 20 1-20 1-20 (166)
109 3kbt_A Beta-I spectrin, spectr 62.5 88 0.003 31.6 13.6 23 703-725 218-240 (326)
110 3s84_A Apolipoprotein A-IV; fo 60.6 35 0.0012 34.0 9.5 166 574-756 43-229 (273)
111 1quu_A Human skeletal muscle a 60.2 1.3E+02 0.0043 29.2 16.0 142 595-749 17-175 (250)
112 3vth_A Hydrogenase maturation 59.6 12 0.00042 43.2 6.7 64 312-380 679-748 (761)
113 2d0o_A DIOL dehydratase-reacti 59.2 35 0.0012 37.4 9.6 46 136-181 127-173 (610)
114 2ews_A Pantothenate kinase; PA 58.4 5.8 0.0002 40.1 3.4 20 2-21 21-40 (287)
115 3hm8_A Hexokinase-3; glucose, 57.8 76 0.0026 34.0 12.1 57 149-212 159-218 (445)
116 3mcp_A Glucokinase; structural 56.8 1E+02 0.0034 32.1 12.8 113 3-204 11-158 (366)
117 2w40_A Glycerol kinase, putati 56.0 6.7 0.00023 43.3 3.7 21 2-22 5-25 (503)
118 3ll3_A Gluconate kinase; xylul 55.0 7.4 0.00025 42.9 3.8 21 2-22 5-25 (504)
119 2dpn_A Glycerol kinase; thermu 54.4 6.3 0.00022 43.4 3.1 21 2-22 3-23 (495)
120 3ezw_A Glycerol kinase; glycer 54.0 7.3 0.00025 43.3 3.5 19 3-21 6-24 (526)
121 3g25_A Glycerol kinase; IDP007 52.8 7.3 0.00025 42.9 3.3 21 2-22 7-27 (501)
122 3djc_A Type III pantothenate k 52.1 8.9 0.0003 38.3 3.5 21 2-22 3-23 (266)
123 2p3r_A Glycerol kinase; glycer 52.1 7.9 0.00027 42.8 3.4 20 2-21 4-23 (510)
124 3ifr_A Carbohydrate kinase, FG 51.4 9.8 0.00033 42.0 4.0 21 2-22 8-28 (508)
125 3l0q_A Xylulose kinase; xlylul 51.3 9.8 0.00034 42.5 4.1 21 2-22 6-26 (554)
126 3h3n_X Glycerol kinase; ATP-bi 50.7 8.5 0.00029 42.5 3.4 21 2-22 6-26 (506)
127 3zx3_A Ectonucleoside triphosp 50.6 20 0.00068 38.6 6.2 44 167-212 151-199 (452)
128 4bc3_A Xylulose kinase; transf 50.0 9.8 0.00034 42.3 3.8 21 2-22 11-31 (538)
129 2zf5_O Glycerol kinase; hypert 49.6 9.1 0.00031 42.1 3.4 20 2-21 4-23 (497)
130 3hz6_A Xylulokinase; xylulose, 49.1 8.9 0.00031 42.4 3.3 20 2-21 6-25 (511)
131 3i8b_A Xylulose kinase; strain 48.8 9.8 0.00034 42.1 3.5 21 2-22 6-27 (515)
132 3h6e_A Carbohydrate kinase, FG 48.5 7.7 0.00026 42.5 2.5 21 2-22 7-27 (482)
133 3f9m_A Glucokinase; hexokinase 47.9 1.2E+02 0.004 32.8 11.6 57 149-212 183-242 (470)
134 2uyt_A Rhamnulokinase; rhamnos 47.9 7.5 0.00026 42.7 2.4 19 2-20 5-23 (489)
135 3jvp_A Ribulokinase; PSI-II, N 47.2 11 0.00036 42.4 3.5 19 2-20 6-24 (572)
136 3uun_A Dystrophin; triple heli 45.6 87 0.003 26.0 8.6 44 627-670 3-54 (119)
137 4e1j_A Glycerol kinase; struct 45.5 13 0.00044 41.2 3.8 21 2-22 27-47 (520)
138 2itm_A Xylulose kinase, xylulo 45.3 11 0.00037 41.4 3.1 19 3-21 2-20 (484)
139 3uul_A Utrophin; spectrin repe 45.3 42 0.0014 28.1 6.4 25 703-727 3-27 (118)
140 3f31_A Spectrin alpha chain, b 45.2 1.5E+02 0.005 26.1 10.3 82 650-752 13-94 (149)
141 3o8m_A Hexokinase; rnaseh-like 44.0 62 0.0021 35.1 8.8 31 192-222 78-109 (485)
142 1hnj_A Beta-ketoacyl-acyl carr 43.6 25 0.00085 35.8 5.4 49 307-358 213-261 (317)
143 2d4w_A Glycerol kinase; alpha 43.1 12 0.00042 41.2 3.1 21 2-22 3-23 (504)
144 3cet_A Conserved archaeal prot 41.7 15 0.0005 37.8 3.2 68 299-376 244-321 (334)
145 3l4q_C Phosphatidylinositol 3- 39.6 1.7E+02 0.0057 26.7 9.4 93 623-727 7-114 (170)
146 3nmd_A CGMP dependent protein 39.3 71 0.0024 24.6 5.8 46 578-624 26-71 (72)
147 2e1z_A Propionate kinase; TDCD 39.1 1.4E+02 0.005 31.4 10.3 43 310-356 313-356 (415)
148 2iak_A Bullous pemphigoid anti 39.1 2.5E+02 0.0086 26.4 11.7 25 703-727 121-145 (224)
149 3khy_A Propionate kinase; csgi 38.8 96 0.0033 32.3 8.8 25 331-355 313-338 (384)
150 2yhx_A Hexokinase B; transfera 38.6 1.1E+02 0.0038 32.9 9.8 53 192-244 59-117 (457)
151 3f9m_A Glucokinase; hexokinase 38.4 75 0.0026 34.3 8.3 52 192-246 75-135 (470)
152 3bex_A Type III pantothenate k 38.2 18 0.00063 35.6 3.2 21 2-22 4-24 (249)
153 1ub7_A 3-oxoacyl-[acyl-carrier 37.6 33 0.0011 34.9 5.3 47 309-358 217-263 (322)
154 1zc6_A Probable N-acetylglucos 37.3 21 0.00073 36.1 3.7 63 307-378 228-292 (305)
155 3edv_A Spectrin beta chain, br 36.9 3.3E+02 0.011 27.1 15.8 26 704-729 221-246 (323)
156 2ebd_A 3-oxoacyl-[acyl-carrier 36.3 37 0.0013 34.3 5.3 47 309-358 207-253 (309)
157 3uul_A Utrophin; spectrin repe 36.2 73 0.0025 26.5 6.5 43 628-670 4-54 (118)
158 1sjj_A Actinin; 3-helix bundle 35.8 5.2E+02 0.018 30.0 16.0 45 706-751 489-533 (863)
159 2aa4_A Mannac kinase, putative 35.2 22 0.00074 35.7 3.3 43 163-211 96-138 (289)
160 2kmf_A Photosystem II 11 kDa p 34.5 2.1E+02 0.0072 24.2 9.4 87 630-719 19-112 (115)
161 2y6x_A PSB27, photosystem II 1 34.4 2.1E+02 0.0072 24.1 10.3 90 629-721 14-110 (113)
162 3r6n_A Desmoplakin; spectrin r 34.3 3.1E+02 0.011 29.3 12.4 49 703-752 94-142 (450)
163 3uun_A Dystrophin; triple heli 34.3 56 0.0019 27.2 5.5 25 703-727 3-27 (119)
164 3edu_A Beta-I spectrin, spectr 34.1 2.3E+02 0.008 26.4 10.5 23 703-725 109-131 (218)
165 1msz_A DNA-binding protein smu 33.6 29 0.00099 27.9 3.0 28 140-167 34-61 (86)
166 1zbs_A Hypothetical protein PG 33.4 24 0.00081 35.5 3.3 67 306-379 211-280 (291)
167 3hm8_A Hexokinase-3; glucose, 33.3 1.2E+02 0.0042 32.4 8.8 34 192-226 57-90 (445)
168 2dfs_A Myosin-5A; myosin-V, in 33.2 1.1E+02 0.0038 36.9 9.5 19 599-617 921-939 (1080)
169 1gs9_A Apolipoprotein E, APOE4 33.0 1.8E+02 0.006 26.4 8.7 63 570-639 83-145 (165)
170 2aa4_A Mannac kinase, putative 32.0 32 0.0011 34.3 4.0 46 332-377 234-286 (289)
171 3htv_A D-allose kinase, alloki 31.3 85 0.0029 31.7 7.1 48 331-378 239-298 (310)
172 1zow_A 3-oxoacyl-[acyl-carrier 30.8 51 0.0017 33.3 5.3 47 309-358 209-255 (313)
173 2x3e_A 3-oxoacyl-[acyl-carrier 30.6 53 0.0018 33.6 5.5 47 309-358 221-267 (331)
174 2h3g_X Biosynthetic protein; p 30.3 31 0.0011 34.3 3.4 20 3-22 2-21 (268)
175 3lbx_A Spectrin alpha chain, e 30.2 2E+02 0.0067 25.7 8.7 26 652-677 25-50 (161)
176 1saz_A Probable butyrate kinas 30.1 26 0.00089 36.9 3.0 49 331-379 295-348 (381)
177 1saz_A Probable butyrate kinas 29.9 37 0.0013 35.7 4.2 20 2-21 3-22 (381)
178 2ra1_A Surface layer protein; 29.6 2.5E+02 0.0084 29.1 9.7 115 629-756 101-229 (412)
179 2a01_A Apolipoprotein A-I; fou 29.0 1E+02 0.0036 29.9 7.0 120 574-694 109-241 (243)
180 1zxo_A Conserved hypothetical 28.5 22 0.00077 35.7 2.0 67 308-378 211-277 (291)
181 1mzj_A Beta-ketoacylsynthase I 28.2 53 0.0018 33.7 5.0 46 310-358 229-274 (339)
182 4am6_A Actin-like protein ARP8 27.9 25 0.00084 39.6 2.3 48 309-356 476-525 (655)
183 1sz2_A Glucokinase, glucose ki 27.0 4.9E+02 0.017 26.1 16.3 232 122-377 52-324 (332)
184 4ehp_B Catenin alpha-1; adhere 26.6 48 0.0016 27.9 3.3 78 673-750 26-109 (111)
185 3r6n_A Desmoplakin; spectrin r 26.6 6E+02 0.021 27.0 17.7 101 627-727 94-224 (450)
186 1d7m_A Cortexillin I; coiled-c 26.2 1.9E+02 0.0066 22.9 6.4 57 633-694 4-60 (101)
187 3edv_A Spectrin beta chain, br 26.1 4.9E+02 0.017 25.7 13.1 22 703-724 114-135 (323)
188 1zbs_A Hypothetical protein PG 26.0 24 0.00084 35.4 1.8 61 136-206 59-121 (291)
189 3zyy_X Iron-sulfur cluster bin 25.4 2.7E+02 0.0093 31.1 10.2 96 193-344 205-302 (631)
190 4dfe_A 3-oxoacyl-[acyl-carrier 25.0 76 0.0026 32.4 5.4 50 307-359 229-278 (333)
191 1ywm_A C protein alpha-antigen 24.9 2E+02 0.0068 25.8 7.0 56 687-755 128-185 (200)
192 2yhw_A Bifunctional UDP-N-acet 24.4 40 0.0014 34.7 3.1 44 163-211 131-174 (343)
193 1u5p_A Spectrin alpha chain, b 24.4 4.2E+02 0.014 24.4 14.8 48 704-752 111-158 (216)
194 3bex_A Type III pantothenate k 24.3 2E+02 0.0069 27.9 8.1 46 298-344 178-223 (249)
195 3epq_A Putative fructokinase; 24.1 1.1E+02 0.0038 30.7 6.4 48 331-378 224-288 (302)
196 1u6e_A 3-oxoacyl-[acyl-carrier 24.0 76 0.0026 32.3 5.2 46 309-357 229-274 (335)
197 2f9w_A Pantothenate kinase; CO 24.0 53 0.0018 32.7 3.8 21 2-22 24-45 (271)
198 1kae_A HDH, histidinol dehydro 23.5 1.1E+02 0.0037 32.4 6.0 72 137-212 154-243 (434)
199 3zyy_X Iron-sulfur cluster bin 23.2 1.2E+02 0.0041 34.0 6.8 57 295-352 499-555 (631)
200 1cun_A Protein (alpha spectrin 23.2 4.3E+02 0.015 24.1 14.3 47 704-751 108-154 (213)
201 1nfn_A Apolipoprotein E3; lipi 22.9 2.2E+02 0.0074 26.5 7.6 23 594-616 105-127 (191)
202 3sk3_A Acetate kinase, acetoki 22.5 68 0.0023 33.9 4.4 47 307-356 318-365 (415)
203 3kbt_A Beta-I spectrin, spectr 22.4 5.7E+02 0.019 25.2 13.2 46 705-751 113-158 (326)
204 1ted_A PKS18; thiolase fold, s 22.0 67 0.0023 33.7 4.4 48 309-359 284-331 (393)
205 1bdg_A Hexokinase; phosphotran 21.8 2.4E+02 0.008 30.2 8.7 23 193-215 67-89 (451)
206 3s21_A 3-oxoacyl-[ACP] synthas 21.5 1E+02 0.0035 31.6 5.6 51 306-359 240-290 (345)
207 3htv_A D-allose kinase, alloki 21.4 57 0.0019 33.1 3.5 43 163-211 107-149 (310)
208 1zxo_A Conserved hypothetical 21.2 12 0.00039 37.9 -1.9 59 137-205 58-118 (291)
209 3oja_B Anopheles plasmodium-re 21.1 7.3E+02 0.025 27.1 13.2 28 703-730 556-583 (597)
210 2q2r_A Glucokinase 1, putative 21.1 54 0.0018 34.2 3.4 20 1-20 29-48 (373)
211 3r2p_A Apolipoprotein A-I; amp 21.0 3.9E+02 0.013 24.4 9.0 46 570-617 66-111 (185)
212 4gic_A HDH, histidinol dehydro 20.3 1.1E+02 0.0038 32.3 5.3 75 137-212 160-249 (423)
No 1
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=1.8e-111 Score=979.63 Aligned_cols=649 Identities=36% Similarity=0.606 Sum_probs=589.3
Q ss_pred CeEEEEEccccceEEEEEeCCceEEEeCCCCCccceeEEEEcCCceEEcHhHHHhHhhCCcchHHHHHHhhCCCCCCHHH
Q 004296 1 MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVV 80 (763)
Q Consensus 1 m~vvGID~Gtt~s~va~~~~~~~~ii~n~~~~r~~ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~ 80 (763)
|++||||||||||+||++.+|+++++.|+.|+|.+||+|+|.+++++||..|..++.++|.++++++|||||+.++++.+
T Consensus 2 m~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 81 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDF 81 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTH
T ss_pred CcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhcCCceeeeCCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHHH
Q 004296 81 QKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAA 160 (763)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~~Aa 160 (763)
+.+.+++||.+++.++|.+.+.+.+.|+.+.++|+++++++|++|+..|+.+++.++.++|||||+||++.||+++++|+
T Consensus 82 ~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa 161 (675)
T 3d2f_A 82 EQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAA 161 (675)
T ss_dssp HHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence 99999999999998889999999988877889999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeeeecchHHHHHhhhccccCCCC--CCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCchHHHHHHH
Q 004296 161 SIAGLRPLRLIHDCTATALGYGIYKTDFAN--GGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVL 238 (763)
Q Consensus 161 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~--~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~D~~l 238 (763)
++|||++++||+||+|||++|++.+.+++. ..+.++||||+||||||+|++++.+|.++|+++.|+.++||.+||+.|
T Consensus 162 ~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l 241 (675)
T 3d2f_A 162 RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAI 241 (675)
T ss_dssp HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHH
Confidence 999999999999999999999987654432 457899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCCCCceeEEeecccCCcceEEEecHHHHHHHHhhHHHHHHHHH
Q 004296 239 FGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPC 318 (763)
Q Consensus 239 ~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i 318 (763)
++|+..+|..++++++..+++++.||+.+||++|+.||.+.++.+.+++++++.++.+.|||++|+++|+|+++++..+|
T Consensus 242 ~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i 321 (675)
T 3d2f_A 242 TEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPV 321 (675)
T ss_dssp HHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHH
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988889999999899999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhhhhhCCCccccceEEEecccce
Q 004296 319 RKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYS 398 (763)
Q Consensus 319 ~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a~~~s~~~~~~~~~~~d~~~~~ 398 (763)
+++|+.++++..+|+.|+||||+||+|+|++.|++.||.++..+.||++|||+|||++|+.+++.++++++.+.|++||+
T Consensus 322 ~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~~~l~Dv~p~s 401 (675)
T 3d2f_A 322 TKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPYS 401 (675)
T ss_dssp HHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCCCCEEEEEECSC
T ss_pred HHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCcccceEEEeeeecc
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred eEEEecCCCcccCCCcceeeecCCCCcCceEEEEeeecCceEEEEEEeCCCCCCCCCCcceeEEEECCCCCCCCCc-ceE
Q 004296 399 IGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSLFHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSEN-AKV 477 (763)
Q Consensus 399 i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ig~~~i~~i~~~~~~~-~~i 477 (763)
||++|.++. ++ +.+.+||++|+++|++++.+|++..++++.++|++...++.++|..||+|.|.|+++++.+. ++|
T Consensus 402 lgi~~~~~~-~~--~~~~~li~rnt~iP~~k~~~f~~~~~~~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~~i 478 (675)
T 3d2f_A 402 VSYSWDKQV-ED--EDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPV 478 (675)
T ss_dssp EEEEECCTT-CS--CSEEEEECTTEEESEEEEEEEEESSCEEEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSCSCEEE
T ss_pred eEeeecCCC-CC--cceEEEEcCCCCCCcccceeeeecCCceEEEEEcCCcccccccCceeeEEEecCcCCCCCCCcceE
Confidence 999998631 11 35899999999999999999999999999998866555554589999999999999987775 599
Q ss_pred EEEEEEcCCccEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCCccccccccccc
Q 004296 478 KVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHSSAVSVVRDKAG 557 (763)
Q Consensus 478 ~v~~~~d~~gil~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 557 (763)
+|+|.+|.||+|+|+++.++++.+.+ +.|.++
T Consensus 479 ~v~f~id~~Gil~V~a~~~~~~~~~~------------------------------------------------~~~~t~ 510 (675)
T 3d2f_A 479 KLKLRCDPSGLHTIEEAYTIEDIEAG------------------------------------------------SDTKTV 510 (675)
T ss_dssp EEEEEECTTSCEEEEEEEEECC------------------------------------------------------CCCC
T ss_pred EEEEEEcCCCcEEEEEEEEeeccccc------------------------------------------------ccccCc
Confidence 99999999999999999876532210 015566
Q ss_pred ceeeEEEeeeccCCCCHHHHHHHHHHHHHHhcCchhHHHHHHHhhhhHHHHHHHHHHhhhhhccCCCHHHHHHHHHHHHH
Q 004296 558 RRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQE 637 (763)
Q Consensus 558 ~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~e~~~l~~~l~e 637 (763)
++..++|+... ++||+++++++++++.+|..+|+.++++.++||+||+|+|++|++|++.+..++++++++++...|++
T Consensus 511 ~~~~i~i~~~~-~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ 589 (675)
T 3d2f_A 511 KKDDLTIVAHT-FGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNK 589 (675)
T ss_dssp EEEECEEEEEC-SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTGGGSCHHHHHHHHHHHHH
T ss_pred ceeeEEEecCC-CCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 77788888765 47999999999999999999999999999999999999999999998778899999999999999999
Q ss_pred HHHHhhcCCCCcCHHHHHHHHHHHHhchhhHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCc
Q 004296 638 TEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRTAVGSLPP 701 (763)
Q Consensus 638 ~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~i~~ 701 (763)
+++|||++++++++++|++|+++|+++++||..|++|++.||.+++.|++.|+.++.+++.+.+
T Consensus 590 ~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~~rp~~~~~~~~~~~~~~~~~~~~~~ 653 (675)
T 3d2f_A 590 AEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKKQAIRSKQEASQMAAMAEKLAA 653 (675)
T ss_dssp HHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------------
T ss_pred HHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888899999999999999999999999999999999999999999999999877644
No 2
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=1.6e-98 Score=866.01 Aligned_cols=590 Identities=27% Similarity=0.457 Sum_probs=543.9
Q ss_pred Ce-EEEEEccccceEEEEEeCCceEEEeCCCCCccceeEEEEcC-CceEEcHhHHHhHhhCCcchHHHHHHhhCCCCCCH
Q 004296 1 MS-VVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGE-KQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDP 78 (763)
Q Consensus 1 m~-vvGID~Gtt~s~va~~~~~~~~ii~n~~~~r~~ps~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~ 78 (763)
|+ +||||||||||+||++.+|.++++.|..|+|.+||+|+|.+ +++++|..|+.++..+|.++++++|||||+.++++
T Consensus 1 M~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 80 (605)
T 4b9q_A 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (605)
T ss_dssp -CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSH
T ss_pred CCcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCH
Confidence 54 99999999999999999999999999999999999999974 57999999999999999999999999999999999
Q ss_pred HHHhhhhcCCceeeeCCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHH
Q 004296 79 VVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLN 158 (763)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~~ 158 (763)
.++.+.+++||.++..++|.+.+.+ .+ ..++|+++++++|++|++.++.+++.++.++|||||+||++.||+++++
T Consensus 81 ~v~~~~~~~p~~~~~~~~g~~~~~~--~~--~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~ 156 (605)
T 4b9q_A 81 EVQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKD 156 (605)
T ss_dssp HHHHHHTTCSSEEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEcCCCceEEEE--CC--EEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 9999999999999998888887765 33 6899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeC----CeEEEEEEeCCCCCchHHH
Q 004296 159 AASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEA----GHMKVLSHAFDSSLGGRDF 234 (763)
Q Consensus 159 Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~----~~~~vl~~~~~~~lGG~~~ 234 (763)
|+++|||+++++|+||+|||++|++... ..+.++||||+||||||+|++++.+ +.++++++.++.++||.+|
T Consensus 157 Aa~~AGl~v~~li~EP~AAAlaygl~~~----~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~ 232 (605)
T 4b9q_A 157 AGRIAGLEVKRIINEPTAAALAYGLDKG----TGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDF 232 (605)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHHHTTSC----CSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHH
T ss_pred HHHHcCCceEEEeCcHHHHHHHhhhhcc----CCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHH
Confidence 9999999999999999999999998653 3468999999999999999999988 8999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCCCCceeEEeecccCC----cceEEEecHHHHHHHHhhH
Q 004296 235 DDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDE----KDVRGFIKREEFEELASGL 310 (763)
Q Consensus 235 D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~----~d~~~~itr~efe~l~~~~ 310 (763)
|..|++||.++|+.+++.++..+++++.+|+.+||++|+.||.+..+.+.++.+..+ .++.+.|||++|+++|+|+
T Consensus 233 D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~ 312 (605)
T 4b9q_A 233 DSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDL 312 (605)
T ss_dssp HHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988877654 6788999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhhhhhCCCccccceE
Q 004296 311 TEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYE 390 (763)
Q Consensus 311 ~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a~~~s~~~~~~~~~ 390 (763)
++++..+++++|+.+++...+|+.|+||||+||+|+|++.|+++||.++....||++|||+|||++|+.+++. ++++.
T Consensus 313 ~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~--~~~~~ 390 (605)
T 4b9q_A 313 VNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVL 390 (605)
T ss_dssp HHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTS--SCSEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCC--CCceE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986 57899
Q ss_pred EEecccceeEEEecCCCcccCCCcceeeecCCCCcCceEEEEeeecCc----eEEEEEEeCCCCCCCCCCcceeEEEECC
Q 004296 391 VQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIGP 466 (763)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~~ 466 (763)
+.|++|++||+++.+ +.+.+||++|+++|++++.+|++..| +.|.+++++. ....+|..||+|.+.+
T Consensus 391 l~dv~p~slgie~~~-------g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~--~~~~~n~~lg~~~l~~ 461 (605)
T 4b9q_A 391 LLDVTPLSLGIETMG-------GVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGER--KRAADNKSLGQFNLDG 461 (605)
T ss_dssp EECBCSSCEEEEETT-------TEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSC--SBGGGSEEEEEEEEEC
T ss_pred EEeeeeeEEEEEEcC-------CEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccc--cccccCCEeeEEEEeC
Confidence 999999999999986 47899999999999999999988554 6677765543 3347899999999999
Q ss_pred CCCCCCCcceEEEEEEEcCCccEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCC
Q 004296 467 FQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHS 546 (763)
Q Consensus 467 i~~~~~~~~~i~v~~~~d~~gil~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (763)
+|+.+.|.++|+|+|.+|.||+|+|++.+
T Consensus 462 i~~~~~g~~~i~v~f~id~~gil~v~a~~--------------------------------------------------- 490 (605)
T 4b9q_A 462 INPAPRGMPQIEVTFDIDADGILHVSAKD--------------------------------------------------- 490 (605)
T ss_dssp CCCCSTTCCCEEEEEEECTTSCEEEEEEE---------------------------------------------------
T ss_pred CCCCcCCCceEEEEEEEcCCcEEEEEEEe---------------------------------------------------
Confidence 99999999999999999999999998874
Q ss_pred cccccccccccceeeEEEeeeccCCCCHHHHHHHHHHHHHHhcCchhHHHHHHHhhhhHHHHHHHHHHhhhhhccCCCHH
Q 004296 547 SAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQ 626 (763)
Q Consensus 547 ~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~ 626 (763)
+.++++..++|+.. .+||+++++++.+++.++..+|++.+++.++||+||+|+|++|+.|++ +..+++++
T Consensus 491 -------~~tg~~~~i~i~~~--~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~~-~~~~~~~~ 560 (605)
T 4b9q_A 491 -------KNSGKEQKITIKAS--SGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVEE-AGDKLPAD 560 (605)
T ss_dssp -------TTTCCEECCEEESC--CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HGGGSCHH
T ss_pred -------cCCCcEEEEEecCC--CCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhCCHH
Confidence 23344556777655 369999999999999999999999999999999999999999999975 78899999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHhchhhHHHhhhh
Q 004296 627 EREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKD 674 (763)
Q Consensus 627 e~~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e 674 (763)
+|+++...++++++||+.+ ++++|++++++|++.+.||..++++
T Consensus 561 ~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 561 DKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999965 4899999999999999999998764
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=2.3e-97 Score=856.34 Aligned_cols=589 Identities=27% Similarity=0.460 Sum_probs=540.0
Q ss_pred eEEEEEccccceEEEEEeCCceEEEeCCCCCccceeEEEEc-CCceEEcHhHHHhHhhCCcchHHHHHHhhCCCCCCHHH
Q 004296 2 SVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFG-EKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVV 80 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~~~ii~n~~~~r~~ps~v~~~-~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~ 80 (763)
.+||||||||||+||++.+|.++++.|+.|++.+||+|+|. +++++||..|+.+...+|.++++++||+||+.++++.+
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v 82 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTH
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHH
Confidence 48999999999999999999999999999999999999995 56789999999999999999999999999999999999
Q ss_pred HhhhhcCCceeeeCCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHHH
Q 004296 81 QKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAA 160 (763)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~~Aa 160 (763)
+...+.+||.++...+|.+.+.+ .| +.++|+++++++|+++++.|+.+++.++.++|||||+||++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~g~~~i~~--~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~ 158 (605)
T 2kho_A 83 QRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (605)
T ss_dssp HHHHHHCSSCEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEECCCCceEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHH
Confidence 99889999999888888887776 44 579999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEe----CCeEEEEEEeCCCCCchHHHHH
Q 004296 161 SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFE----AGHMKVLSHAFDSSLGGRDFDD 236 (763)
Q Consensus 161 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~----~~~~~vl~~~~~~~lGG~~~D~ 236 (763)
++|||+++++++||+|||++|++... ..+.++||||+||||||+|++++. ++.++|+++.|+.++||.+||.
T Consensus 159 ~~AGl~v~~li~EP~AAAlay~l~~~----~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~ 234 (605)
T 2kho_A 159 RIAGLEVKRIINEPTAAALAYGLDKG----TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (605)
T ss_dssp HTTTCEEEEEEEHHHHHHHHTTTTSS----SSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHH
T ss_pred HHcCCceEEEecCHHHHHHHhhhccc----CCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHH
Confidence 99999999999999999999997642 257899999999999999999998 7899999999999999999999
Q ss_pred HHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCCCCceeEEeecccCC----cceEEEecHHHHHHHHhhHHH
Q 004296 237 VLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDE----KDVRGFIKREEFEELASGLTE 312 (763)
Q Consensus 237 ~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~----~d~~~~itr~efe~l~~~~~~ 312 (763)
.|++|+.++|+.+++.++..+++++.+|+.+||++|+.||.+.++.+.+++++++ .++.+.|||++|+++|+|+++
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~ 314 (605)
T 2kho_A 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN 314 (605)
T ss_dssp HHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTG
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998889998877653 567889999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhhhhhCCCccccceEEE
Q 004296 313 KIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQ 392 (763)
Q Consensus 313 ~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a~~~s~~~~~~~~~~~ 392 (763)
++..+|+++|+.+++...+|+.|+||||+||+|+|++.|+++||.++....||++|||+|||++|+.+++. ++++.+.
T Consensus 315 ~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~--~~~~~l~ 392 (605)
T 2kho_A 315 RSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVLLL 392 (605)
T ss_dssp GGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTS--CCCCCCS
T ss_pred HHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCC--ccCceEE
Confidence 99999999999999999999999999999999999999999999889999999999999999999999876 5789999
Q ss_pred ecccceeEEEecCCCcccCCCcceeeecCCCCcCceEEEEeeecCc----eEEEEEEeCCCCCCCCCCcceeEEEECCCC
Q 004296 393 DCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIGPFQ 468 (763)
Q Consensus 393 d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~~i~ 468 (763)
|++|+++|+++.+ +.+.+||++|+++|++++.+|++..| +.|.+++++ +....+|..||+|.|.++|
T Consensus 393 dv~p~slgi~~~~-------g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge--~~~~~~n~~lg~~~l~~i~ 463 (605)
T 2kho_A 393 DVTPLSLGIETMG-------GVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGE--RKRAADNKSLGQFNLDGIN 463 (605)
T ss_dssp BCCCCCEEEEETT-------TEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESS--CSBGGGSEEEEEEEEECCC
T ss_pred eeeeeeccccccC-------CceEEEEecccccCccceEEEEecCCCceEEEEEEEecc--CcccccCcEEeEEEecCCC
Confidence 9999999999986 47899999999999999999987544 566665543 3334789999999999999
Q ss_pred CCCCCcceEEEEEEEcCCccEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCCcc
Q 004296 469 GSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHSSA 548 (763)
Q Consensus 469 ~~~~~~~~i~v~~~~d~~gil~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (763)
+.+.|.++|+|+|.+|.||+|+|++.+
T Consensus 464 ~~~~g~~~i~v~f~id~~gil~v~a~~----------------------------------------------------- 490 (605)
T 2kho_A 464 PAPRGMPQIEVTFDIDADGILHVSAKD----------------------------------------------------- 490 (605)
T ss_dssp SCCTTCSCEEEEEEECTTSCEEEEEEE-----------------------------------------------------
T ss_pred CCCCCCcEEEEEEEEcCCCceeEEEEE-----------------------------------------------------
Confidence 998888999999999999999998863
Q ss_pred cccccccccceeeEEEeeeccCCCCHHHHHHHHHHHHHHhcCchhHHHHHHHhhhhHHHHHHHHHHhhhhhccCCCHHHH
Q 004296 549 VSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQER 628 (763)
Q Consensus 549 ~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~e~ 628 (763)
+.+++...++|+.. ++||+++++++.+++.++..+|+.++++.++||+||+|+|++|+.|++ +..++++++|
T Consensus 491 -----~~tg~~~~i~i~~~--~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~~-~~~~~~~~~~ 562 (605)
T 2kho_A 491 -----KNSGKEQKITIKAS--SGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEE-AGDKLPADDK 562 (605)
T ss_dssp -----TTTCCEEEEEECTT--SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HGGGSCHHHH
T ss_pred -----cCCCceeecccccc--cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHH
Confidence 22334456777655 579999999999999999999999999999999999999999999976 8889999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHhchhhHHHhhhh
Q 004296 629 EGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKD 674 (763)
Q Consensus 629 ~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e 674 (763)
+++.+.++++++||+++ ++++|++++++|+++++||..|++.
T Consensus 563 ~~i~~~~~~~~~~l~~~----~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 563 TAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHHHHHHHTTSS----CHHHHHHHHHHHHTTCHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999943 7899999999999999999998763
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=1.7e-91 Score=800.25 Aligned_cols=542 Identities=33% Similarity=0.540 Sum_probs=500.3
Q ss_pred eEEEEEccccceEEEEEeCCceEEEeCCCCCccceeEEEEcCCceEEcHhHHHhHhhCCcchHHHHHHhhCCCCCCHHHH
Q 004296 2 SVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQ 81 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~~~ii~n~~~~r~~ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~ 81 (763)
.+||||||||||+||++.+|+++++.|+.|+|++||+|+|.+++++||..|..++.++|.++++++|||||+.++++.++
T Consensus 5 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 84 (554)
T 1yuw_A 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQ 84 (554)
T ss_dssp CCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSHHH
T ss_pred CEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCceeeeCCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHHHH
Q 004296 82 KDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAAS 161 (763)
Q Consensus 82 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~~Aa~ 161 (763)
..++.+||.++.. +|.+.+.+.+.+..+.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|++
T Consensus 85 ~~~~~~p~~v~~~-~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A~~ 163 (554)
T 1yuw_A 85 SDMKHWPFMVVND-AGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGT 163 (554)
T ss_dssp HHHTTCSSEEEEE-TTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHhhcCCeEEEec-CCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 9999999999854 788888899888888999999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCchHHHHHHHHHH
Q 004296 162 IAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGY 241 (763)
Q Consensus 162 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~ 241 (763)
.|||+++++++||+|||++|++.+.. ..+.++||||+||||||+|++++.+|.++|+++.++.++||.+||..|++|
T Consensus 164 ~AGl~~~~li~EP~AAAlay~~~~~~---~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~ 240 (554)
T 1yuw_A 164 IAGLNVLRIINEPTAAAIAYGLDKKV---GAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNH 240 (554)
T ss_dssp TTTCEEEEEEEHHHHHHHHTTCSTTC---SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HcCCCeEEEeCcHHHHHHHHHhhccC---CCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999986531 246899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCCCCceeEEeecccCCcceEEEecHHHHHHHHhhHHHHHHHHHHHH
Q 004296 242 FAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKA 321 (763)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~ 321 (763)
+.++|..+++.++..+++++.+|+.+||++|+.||.+.+..+.+++++++.++...|+|++|+++++|+++++..+|+++
T Consensus 241 l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~ 320 (554)
T 1yuw_A 241 FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKA 320 (554)
T ss_dssp HHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999899999999999999999999999999999999
Q ss_pred HHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcC-CCCccCCCchhHHhcchHHhhhhhCC--CccccceEEEecccce
Q 004296 322 LADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFG-REPRRSLNASECVARGCALQCAMLSP--AFRVREYEVQDCNPYS 398 (763)
Q Consensus 322 l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg-~~~~~~~n~~eava~Gaa~~a~~~s~--~~~~~~~~~~d~~~~~ 398 (763)
|+.+++...+|+.|+||||+||+|+|++.|++.|+ .++..+.||++|||+|||++|+.+++ .++++++.+.|++|++
T Consensus 321 L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~s 400 (554)
T 1yuw_A 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLS 400 (554)
T ss_dssp HHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSC
T ss_pred HHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeeeE
Confidence 99999999999999999999999999999999995 88888999999999999999999988 4678899999999999
Q ss_pred eEEEecCCCcccCCCcceeeecCCCCcCceEEEEeeecCc----eEEEEEEeCCCCCCCCCCcceeEEEECCCCCCCCCc
Q 004296 399 IGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSEN 474 (763)
Q Consensus 399 i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~~i~~~~~~~ 474 (763)
||+++.+ +.+.+||++|+++|++++.+|++..| +.|.+++++ .....+|..||+|.|.++|+.+.|.
T Consensus 401 lgi~~~~-------g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge--~~~~~~n~~lg~~~l~~i~~~~~g~ 471 (554)
T 1yuw_A 401 LGIETAG-------GVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGE--RAMTKDNNLLGKFELTGIPPAPRGV 471 (554)
T ss_dssp EEEEETT-------TEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESS--SSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred EEEEecC-------ceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecC--ccccccCcEEEEEEEeCCCCCcccc
Confidence 9999976 47899999999999999999987433 566665543 3334689999999999999998888
Q ss_pred ceEEEEEEEcCCccEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCCcccccccc
Q 004296 475 AKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHSSAVSVVRD 554 (763)
Q Consensus 475 ~~i~v~~~~d~~gil~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 554 (763)
++|+|+|.+|.||+|+|++.+ +
T Consensus 472 ~~i~v~f~id~~gil~v~a~~----------------------------------------------------------~ 493 (554)
T 1yuw_A 472 PQIEVTFDIDANGILNVSAVD----------------------------------------------------------K 493 (554)
T ss_dssp CCEEEEEEECTTCCEEEEEEE----------------------------------------------------------T
T ss_pred cEEEEEEEEccCceEEEEEEe----------------------------------------------------------c
Confidence 999999999999999998863 2
Q ss_pred cccceeeEEEeeeccCCCCHHHHHHHHHHHHHHhcCchhHHHHHHHhhhhHHHHHHHHHHh
Q 004296 555 KAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKL 615 (763)
Q Consensus 555 ~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l 615 (763)
.++++..++|+... ++||+++++++++++.+|..+|+.++++.++||+||+|+|++|++|
T Consensus 494 ~tg~~~~~~i~~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 553 (554)
T 1yuw_A 494 STGKENKITITNDK-GRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553 (554)
T ss_dssp TTCCEEEEEECCCS-SCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred cCCCceeEEEecCC-CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 23344567776553 5799999999999999999999999999999999999999998876
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=4.4e-81 Score=708.94 Aligned_cols=499 Identities=29% Similarity=0.475 Sum_probs=448.5
Q ss_pred eEEEEEccccceEEEEEeCCceEEEeCCCCCccceeEEEEcCCceEEcHhHHHhHhhCCcchHHHHHHhhCCCCCCHHHH
Q 004296 2 SVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQ 81 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~~~ii~n~~~~r~~ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~ 81 (763)
.+||||||||||+||++.+|.++++.|+.|++++||+|+|.++++++|.+|..+...+| ++++++||+||+++.
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~----- 76 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK----- 76 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC-----
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE-----
Confidence 48999999999999999999999999999999999999998888999999999999999 999999999998432
Q ss_pred hhhhcCCceeeeCCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHHHH
Q 004296 82 KDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAAS 161 (763)
Q Consensus 82 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~~Aa~ 161 (763)
+ ...| ..++|+++++++|++|+..++.+++.++.++|||||++|++.||+++++|++
T Consensus 77 ---------~------------~~~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~ 133 (509)
T 2v7y_A 77 ---------V------------EIEG--KQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGR 133 (509)
T ss_dssp ---------E------------EETT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred ---------E------------EECC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 1 1123 3689999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCchHHHHHHHHHH
Q 004296 162 IAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGY 241 (763)
Q Consensus 162 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~ 241 (763)
.||++++++++||+|||++|++.. ..+.++||||+||||||++++++.++.++++++.++.++||.+||+.|++|
T Consensus 134 ~AGl~~~~li~Ep~AAAlay~~~~-----~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~ 208 (509)
T 2v7y_A 134 IAGLEVERIINEPTAAALAYGLDK-----EEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDY 208 (509)
T ss_dssp HTTCEEEEEEEHHHHHHHHTTGGG-----SCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HcCCCeEEEecCHHHHHHHHhhcc-----CCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHH
Confidence 999999999999999999999865 357899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCCCCceeEEeecccCC----cceEEEecHHHHHHHHhhHHHHHHHH
Q 004296 242 FAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDE----KDVRGFIKREEFEELASGLTEKIAIP 317 (763)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~----~d~~~~itr~efe~l~~~~~~~i~~~ 317 (763)
+.++|+.+++.++..+++++.+|+.+||++|+.||.+....+.+++++++ .++.+.|+|++|+++++|+++++..+
T Consensus 209 l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~ 288 (509)
T 2v7y_A 209 LVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGP 288 (509)
T ss_dssp HHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHH
Confidence 99999999999998899999999999999999999998888988876642 46778999999999999999999999
Q ss_pred HHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhhhhhCCCccccceEEEecccc
Q 004296 318 CRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPY 397 (763)
Q Consensus 318 i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a~~~s~~~~~~~~~~~d~~~~ 397 (763)
++++|+.+++...+|+.|+||||+||+|+|++.|++.||.++....||++|||+|||++|+.+++. ++++.+.|++|+
T Consensus 289 i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~--~~~~~~~dv~p~ 366 (509)
T 2v7y_A 289 VRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGE--VKDVVLLDVTPL 366 (509)
T ss_dssp HHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTC--CCCCCCCCBCSS
T ss_pred HHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCC--ccCceEEEeecc
Confidence 999999999998999999999999999999999999999888899999999999999999999875 578999999999
Q ss_pred eeEEEecCCCcccCCCcceeeecCCCCcCceEEEEeeecCc----eEEEEEEeCCCCCCCCCCcceeEEEECCCCCCCCC
Q 004296 398 SIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSE 473 (763)
Q Consensus 398 ~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~~i~~~~~~ 473 (763)
+||+++.+ +.+.+||++|+++|++++.+|++..| +.|.+++++. ....+|..||+|.|.++|+.+.|
T Consensus 367 slgi~~~~-------~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~--~~~~~~~~lg~~~l~~i~~~~~g 437 (509)
T 2v7y_A 367 SLGIETMG-------GVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGER--PMAADNKSLGRFQLTGIPPAPRG 437 (509)
T ss_dssp EEEEEETT-------TEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESS--SBGGGSEEEEEEEEECCCCCCTT
T ss_pred ccceeecC-------CceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCc--cccccCcEEEEEEEeCCCCCCCc
Confidence 99999986 47899999999999999999987543 6677766543 23468899999999999998888
Q ss_pred cceEEEEEEEcCCccEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCCccccccc
Q 004296 474 NAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHSSAVSVVR 553 (763)
Q Consensus 474 ~~~i~v~~~~d~~gil~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (763)
.++|+|+|.+|.||+|+|++.+
T Consensus 438 ~~~i~v~f~id~~gil~v~a~~---------------------------------------------------------- 459 (509)
T 2v7y_A 438 VPQIEVTFDIDANGIVHVRAKD---------------------------------------------------------- 459 (509)
T ss_dssp CSCEEEEEEECTTSCEEEEEEE----------------------------------------------------------
T ss_pred ccEEEEEEEEcCCceEEEEEEE----------------------------------------------------------
Confidence 8899999999999999998863
Q ss_pred ccccceeeEEEeeeccCCCCHHHHHHHHHHHHHHhcCchhHHHHHHHhhhhH
Q 004296 554 DKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALE 605 (763)
Q Consensus 554 k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LE 605 (763)
+.++++..++|+.. ++||+++++++.+++.+|..+|+..+++.++||+||
T Consensus 460 ~~~g~~~~~~i~~~--~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 460 LGTNKEQSITIKSS--SGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp TTTCCEEEEEECSS--CSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred cCCCcEEEEEEEec--CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 22334556777665 479999999999999999999999999999999997
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=1.1e-64 Score=561.30 Aligned_cols=380 Identities=38% Similarity=0.634 Sum_probs=361.0
Q ss_pred CeEEEEEccccceEEEEEeCCceEEEeCCCCCccceeEEEEcCCceEEcHhHHHhHhhCCcchHHHHHHhhCCCCCCHHH
Q 004296 1 MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVV 80 (763)
Q Consensus 1 m~vvGID~Gtt~s~va~~~~~~~~ii~n~~~~r~~ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~ 80 (763)
|.+||||||||||+||++.++.++++.|+.|++++||+|+|.++++++|..|..++.++|.++++++|++||+.++++.+
T Consensus 23 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~~ 102 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATV 102 (404)
T ss_dssp CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHHH
T ss_pred CCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhcCCceeeeCCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHHH
Q 004296 81 QKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAA 160 (763)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~~Aa 160 (763)
+...+.+||.+.. .+|...+.+.+.++...++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 103 ~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~ 181 (404)
T 3i33_A 103 QSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAG 181 (404)
T ss_dssp HHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 9999999999987 478888999988888899999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCchHHHHHHHHH
Q 004296 161 SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFG 240 (763)
Q Consensus 161 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~ 240 (763)
+.||++++.+++||+|||++|+..... ....+..++|||+||||||++++++.++.++++++.++..+||.+||+.|++
T Consensus 182 ~~AGl~~~~li~Ep~AAa~~~~~~~~~-~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~ 260 (404)
T 3i33_A 182 TITGLNVLRIINEPTAAAIAYGLDKKG-CAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 260 (404)
T ss_dssp HHHTCEEEEEEEHHHHHHHHTTTTSSC-SSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHcCCCeEEEeccHHHHHHHHHhhccc-ccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHH
Confidence 999999999999999999999876531 1125789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCCCCceeEEeecccCCcceEEEecHHHHHHHHhhHHHHHHHHHHH
Q 004296 241 YFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRK 320 (763)
Q Consensus 241 ~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~ 320 (763)
++.++|..+++.++..+++.+.+|+.+||++|+.||.+....+.++.+.++.++.+.|+|++|+++++++++++..+|.+
T Consensus 261 ~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~ 340 (404)
T 3i33_A 261 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEK 340 (404)
T ss_dssp HHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHH
T ss_pred HHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhc-CCCCccCCCchhHHhcchHHhhhhhCC
Q 004296 321 ALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLF-GREPRRSLNASECVARGCALQCAMLSP 382 (763)
Q Consensus 321 ~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~f-g~~~~~~~n~~eava~Gaa~~a~~~s~ 382 (763)
+|+.+++...+|+.|+|+||+|++|+|++.|++.| +.++....||++|||+|||++|+++++
T Consensus 341 ~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 341 ALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999 788889999999999999999999875
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=4.5e-63 Score=546.76 Aligned_cols=374 Identities=36% Similarity=0.608 Sum_probs=358.0
Q ss_pred EEEEEccccceEEEEEeCCceEEEeCCCCCccceeEEEEcCCceEEcHhHHHhHhhCCcchHHHHHHhhCCCCCCHHHHh
Q 004296 3 VVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQK 82 (763)
Q Consensus 3 vvGID~Gtt~s~va~~~~~~~~ii~n~~~~r~~ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~~ 82 (763)
+||||||||||+||++.++.++++.|..|++++||+|+|.++++++|..|......+|.++++++|+++|+.++++.++.
T Consensus 20 viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~ 99 (394)
T 3qfu_A 20 VIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQK 99 (394)
T ss_dssp CEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHHHH
T ss_pred EEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCceeeeCCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHHHHH
Q 004296 83 DLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASI 162 (763)
Q Consensus 83 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~~Aa~~ 162 (763)
..+.+||.+. ..+|...+.+.+.++...++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|++.
T Consensus 100 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~ 178 (394)
T 3qfu_A 100 DIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTI 178 (394)
T ss_dssp HHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHHHH
Confidence 9999999988 557888888888888889999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCchHHHHHHHHHHH
Q 004296 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYF 242 (763)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l 242 (763)
||++++.+++||+|||++|+.... ..+.+++|||+||||||++++++.++.+++++..++.++||.+||+.|++++
T Consensus 179 aGl~~~~li~Ep~Aaa~~~~~~~~----~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 254 (394)
T 3qfu_A 179 AGLNVLRIVNEPTAAAIAYGLDKS----DKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQL 254 (394)
T ss_dssp TTCEEEEEEEHHHHHHHHTTTTSC----SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred cCCceEEEecCHHHHHHHHhhccC----CCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHH
Confidence 999999999999999999987643 4578999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCCCCceeEEeecccCCcceEEEecHHHHHHHHhhHHHHHHHHHHHHH
Q 004296 243 AAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKAL 322 (763)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l 322 (763)
.++|..+++.++..+++.+.+|+.+||++|+.||......+.++.+.++.++...|+|++|+++++++++++..+|.++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l 334 (394)
T 3qfu_A 255 IKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVL 334 (394)
T ss_dssp HHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCccEEEEecCCCChHHHHHHHHhhc-CCCCccCCCchhHHhcchHHhhhhhC
Q 004296 323 ADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLF-GREPRRSLNASECVARGCALQCAMLS 381 (763)
Q Consensus 323 ~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~f-g~~~~~~~n~~eava~Gaa~~a~~~s 381 (763)
+.+++...+|+.|+|+||+|++|+|++.|++.| +.++....||++|||+|||++|++++
T Consensus 335 ~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 335 QDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999 78898999999999999999999875
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=3.5e-63 Score=549.72 Aligned_cols=378 Identities=25% Similarity=0.384 Sum_probs=345.0
Q ss_pred CeEEEEEccccceEEEEEeCCceEEEeCCCCCccceeEEEEcCCceEEcHhHHHhHhhCCcchHHHHHHhhCCCCCCHHH
Q 004296 1 MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVV 80 (763)
Q Consensus 1 m~vvGID~Gtt~s~va~~~~~~~~ii~n~~~~r~~ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~ 80 (763)
|.+||||||||||+||++.++.++++.|..|++++||+|+|.++++++|..|..+..++|.++++++|+++|+.++++.+
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~ 92 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDP 92 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhh
Confidence 36899999999999999988899999999999999999999999999999999999999999999999999999887655
Q ss_pred HhhhhcCCceeeeCCCCCeEEEEEec----CceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHH
Q 004296 81 QKDLMVLPFESCESPDGGISIKLKYL----GETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREY 156 (763)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~----~~~~~~~~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l 156 (763)
+.. ..++.+.. .+|.+.+.+... ++.+.++++++++++|++|++.++.+++.++.++|||||++|++.||++|
T Consensus 93 ~~~--~~~~~~~~-~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~ 169 (409)
T 4gni_A 93 THN--HASAHPQE-AGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAAL 169 (409)
T ss_dssp GGG--TTSCCCEE-ETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred hhh--ccccceec-CCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 443 33444433 468888888765 35678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCchHHHHH
Q 004296 157 LNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDD 236 (763)
Q Consensus 157 ~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~D~ 236 (763)
++|++.|||+++.+++||+|||++|+.... ....+..++|||+||||||++++++.++.++++++.++..+||.+||.
T Consensus 170 ~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~--~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~ 247 (409)
T 4gni_A 170 IAAAAAADLEVLQLISEPAAAVLAYDARPE--ATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDK 247 (409)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHTTC--------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHH
T ss_pred HHHHHHcCCCeEEEEcCHHHHHHHHhcccc--cCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHH
Confidence 999999999999999999999999987642 125678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhc--ccccccHHHHHHHHHHHHHHhhhcCCCCceeEEeecccCCcceEEEecHHHHHHHHhhHHHHH
Q 004296 237 VLFGYFAAKFKEQYK--INVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKI 314 (763)
Q Consensus 237 ~l~~~l~~~~~~~~~--~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i 314 (763)
.|++++..+|..+++ .++..+++.+.+|+.+||++|+.||.+....+.++++.++.++...|+|++|+++++|+++++
T Consensus 248 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i 327 (409)
T 4gni_A 248 VLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGF 327 (409)
T ss_dssp HHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHH
Confidence 999999999999888 888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCC--C------ccCCCchhHHhcchHHhhhhhCCC
Q 004296 315 AIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGRE--P------RRSLNASECVARGCALQCAMLSPA 383 (763)
Q Consensus 315 ~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~--~------~~~~n~~eava~Gaa~~a~~~s~~ 383 (763)
..+|+++|+.+++...+|+.|+||||+||+|+|++.|++.||.+ + ....||++|||+|||++|+.....
T Consensus 328 ~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~~ 404 (409)
T 4gni_A 328 NRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQEH 404 (409)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhhh
Confidence 99999999999999999999999999999999999999999865 3 578999999999999999987654
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=4.1e-61 Score=528.72 Aligned_cols=372 Identities=34% Similarity=0.577 Sum_probs=343.0
Q ss_pred eEEEEEccccceEEEEEeCCceEEEeCCCCCccceeEEEEcC-CceEEcHhHHHhHhhCCcchHHHHHHhhCCCCCCHHH
Q 004296 2 SVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGE-KQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVV 80 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~~~ii~n~~~~r~~ps~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~ 80 (763)
.+||||||||||+||++.+|.++++.|+.|++++||+|+|.. +++++|..|..+...+|.++++++|++||+.++++.+
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 82 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHH
Confidence 489999999999999999898999999999999999999964 6789999999999999999999999999999999999
Q ss_pred HhhhhcCCceeeeCCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHHH
Q 004296 81 QKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAA 160 (763)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~~Aa 160 (763)
+...+.+||.++...+|.+.+.+ .| ..++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~--~g--~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 158 (383)
T 1dkg_D 83 QRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (383)
T ss_dssp HHHTTTCSSEEEECSSSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEcCCCcEEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 98888999999878788877766 34 479999999999999999999999988999999999999999999999999
Q ss_pred HHcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEe----CCeEEEEEEeCCCCCchHHHHH
Q 004296 161 SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFE----AGHMKVLSHAFDSSLGGRDFDD 236 (763)
Q Consensus 161 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~----~~~~~vl~~~~~~~lGG~~~D~ 236 (763)
+.||++++.+++||+|||++|+.... ..+.+++|||+||||||++++++. ++.++++++.++..+||.+||+
T Consensus 159 ~~aGl~~~~li~Ep~Aaa~~~~~~~~----~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~ 234 (383)
T 1dkg_D 159 RIAGLEVKRIINEPTAAALAYGLDKG----TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (383)
T ss_dssp HHTTCEESCCCBHHHHHHHHHTCCC-----CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHH
T ss_pred HHcCCceEEEeccHHHHHHHHHhccC----CCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHH
Confidence 99999999999999999999987542 257899999999999999999998 6788999988889999999999
Q ss_pred HHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCCCCceeEEeecccC---C-cceEEEecHHHHHHHHhhHHH
Q 004296 237 VLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMD---E-KDVRGFIKREEFEELASGLTE 312 (763)
Q Consensus 237 ~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~---~-~d~~~~itr~efe~l~~~~~~ 312 (763)
.|++++.++|..+++.++..+++.+.+|+.+||++|+.||......+.++.+.+ + .++.+.|+|++|+++++|+++
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~ 314 (383)
T 1dkg_D 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN 314 (383)
T ss_dssp HHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHH
Confidence 999999999999889888889999999999999999999998888888876654 2 456789999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhhhhhC
Q 004296 313 KIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLS 381 (763)
Q Consensus 313 ~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a~~~s 381 (763)
++..++.++|+.+++...+++.|+|+||+|++|+|++.|++.||.++....||++|||+|||++|++++
T Consensus 315 ~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 315 RSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 999999999999999888999999999999999999999999998888899999999999999998764
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=8.4e-41 Score=361.43 Aligned_cols=309 Identities=22% Similarity=0.318 Sum_probs=241.2
Q ss_pred eEEEEEccccceEEEEEeCCceEEEeCCCCCccceeEEEEcCC--ce-EEcHhHHHhHhhCCcchHHHHHHhhCCCCCCH
Q 004296 2 SVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEK--QR-FIGAAGYASAMMHPKSTVSQVKRLIGRRYGDP 78 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~~~ii~n~~~~r~~ps~v~~~~~--~~-~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~ 78 (763)
.+|||||||+||++++..+ + ++. .+||+|+|..+ .+ ++|++|+....++|.++..
T Consensus 4 ~~igIDlGT~~s~v~~~~~-~--~~~------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~------------- 61 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGK-G--IVV------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA------------- 61 (344)
T ss_dssp CEEEEEECSSEEEEEETTT-E--EEE------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE-------------
T ss_pred ceEEEEcCcCcEEEEECCC-C--EEE------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEE-------------
Confidence 5899999999999987533 3 232 27999999865 34 7999997666555544321
Q ss_pred HHHhhhhcCCceeeeCCCCCeEEEEEecCceeee-cHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHH
Q 004296 79 VVQKDLMVLPFESCESPDGGISIKLKYLGETHTF-CPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYL 157 (763)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~ 157 (763)
..|++ +|.+ ..+ .+++++++++++++.. ..++ ...+|||||++|++.||++++
T Consensus 62 -------~~p~~-----~g~i----------~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~ 115 (344)
T 1jce_A 62 -------IRPMR-----DGVI----------ADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAIL 115 (344)
T ss_dssp -------ECCEE-----TTEE----------SSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHH
T ss_pred -------EecCC-----CCee----------CChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHH
Confidence 11221 2321 122 3677777777776542 1233 478999999999999999999
Q ss_pred HHHHHcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCchHHHHHH
Q 004296 158 NAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDV 237 (763)
Q Consensus 158 ~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~D~~ 237 (763)
+|++.||++++.+++||+|||++|+... ..+..++|||+||||||++++.... ++ ..++..+||.+||+.
T Consensus 116 ~a~~~aG~~~~~li~ep~Aaa~~~~~~~-----~~~~~~lVvDiGggttdvsv~~~~~----~~-~~~~~~lGG~~id~~ 185 (344)
T 1jce_A 116 DAGLEAGASKVFLIEEPMAAAIGSNLNV-----EEPSGNMVVDIGGGTTEVAVISLGS----IV-TWESIRIAGDEMDEA 185 (344)
T ss_dssp HHHHHTTCSEEEEEEHHHHHHHHTTCCT-----TSSSCEEEEEECSSCEEEEEEETTE----EE-EEEEESCSHHHHHHH
T ss_pred HHHHHcCCCeEeccCCHHHHHHhcCCCC-----CCCceEEEEEeCCCeEEEEEEEcCC----EE-eeCCCCccChhHHHH
Confidence 9999999999999999999999998643 3467899999999999999998652 22 234788999999999
Q ss_pred HHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCCCCc------eeEEee--cccCCcceEEEecHHHHHHHHhh
Q 004296 238 LFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAE------APLNIE--CLMDEKDVRGFIKREEFEELASG 309 (763)
Q Consensus 238 l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~------~~i~i~--~l~~~~d~~~~itr~efe~l~~~ 309 (763)
|++++.+++ +.++. ...||++|+.|+.... ..+.++ .+.++.++.+.|+|++|+++++|
T Consensus 186 l~~~l~~~~----~~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~ 252 (344)
T 1jce_A 186 IVQYVRETY----RVAIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRS 252 (344)
T ss_dssp HHHHHHHHH----CEECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHH
T ss_pred HHHHHHHHh----CcccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHH
Confidence 999998764 33332 3689999999987643 234443 44567778899999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCC--CCCc-cEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhhhhhC
Q 004296 310 LTEKIAIPCRKALADAGLH--VDKI-HSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLS 381 (763)
Q Consensus 310 ~~~~i~~~i~~~l~~~~~~--~~~i-~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a~~~s 381 (763)
+++++..+|.++|+.++.. .+.+ +.|+|+||+|++|+|++.|++.|+.++....||++|||+||+++|..++
T Consensus 253 ~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 253 VVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 9999999999999987532 2234 6899999999999999999999998888888999999999999998655
No 11
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=7.4e-33 Score=274.37 Aligned_cols=211 Identities=14% Similarity=0.237 Sum_probs=188.1
Q ss_pred EEEecccceeEEEecCCCcccCCCcceeeecCCCCcCceEEEEeeecCc----eEEEEEEeCCCCCCCCCCcceeEEEEC
Q 004296 390 EVQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIG 465 (763)
Q Consensus 390 ~~~d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~ 465 (763)
++.|++|+|+|+++.+ +.+.+|||||++||++++.+|++..| +.|.+++++ +....+|..||+|.|.
T Consensus 2 ~l~DV~p~slGie~~g-------g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe--~~~~~dn~~Lg~f~l~ 72 (219)
T 4e81_A 2 LLLDVTPLSLGIETMG-------GVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGE--RKRAADNKSLGQFNLD 72 (219)
T ss_dssp CCCCBCSSCEEEEETT-------TEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESS--CSBGGGSEEEEEEEEE
T ss_pred eEEEecCcEEEEEEeC-------CEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcC--CcccccCCEEEEEEEe
Confidence 5789999999999986 47999999999999999999998655 677775443 3334899999999999
Q ss_pred CCCCCCCCcceEEEEEEEcCCccEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCC
Q 004296 466 PFQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSH 545 (763)
Q Consensus 466 ~i~~~~~~~~~i~v~~~~d~~gil~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (763)
|+|+++.|.++|+|+|.+|.||+|+|++.+
T Consensus 73 gipp~p~G~~~IeVtf~iD~nGiL~V~a~d-------------------------------------------------- 102 (219)
T 4e81_A 73 GINPAPRGMPQIEVTFDIDADGILHVSAKD-------------------------------------------------- 102 (219)
T ss_dssp CCCCCSTTCSCEEEEEEECTTCCEEEEEEE--------------------------------------------------
T ss_pred CCCCCCCCCceEEEEEEeCCCCCEeeeeec--------------------------------------------------
Confidence 999999999999999999999999999874
Q ss_pred CcccccccccccceeeEEEeeeccCCCCHHHHHHHHHHHHHHhcCchhHHHHHHHhhhhHHHHHHHHHHhhhhhccCCCH
Q 004296 546 SSAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASD 625 (763)
Q Consensus 546 ~~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~ 625 (763)
+.++++..++|+.. .+||+++|+++.+++.++..+|++.+++.++||.||+|+|++|+.|.+ +..++++
T Consensus 103 --------~~tg~~~~i~I~~~--~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~~l~~-~~~~l~~ 171 (219)
T 4e81_A 103 --------KNSGKEQKITIKAS--SGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEE-AGDKLPA 171 (219)
T ss_dssp --------TTTCCEEEEEECTT--CSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HGGGSCH
T ss_pred --------cccCccceEeeecc--ccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhCCH
Confidence 44566678888764 469999999999999999999999999999999999999999999986 8889999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHhchhhHHHhhhh
Q 004296 626 QEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKD 674 (763)
Q Consensus 626 ~e~~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e 674 (763)
++|++|...+.++++||+++ ++++|++++++|++.+.||..|++.
T Consensus 172 ~~k~~i~~~l~~~~~~L~~~----~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 172 DDKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999976 6899999999999999999999876
No 12
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=100.00 E-value=2.3e-31 Score=266.68 Aligned_cols=211 Identities=17% Similarity=0.238 Sum_probs=184.8
Q ss_pred EecccceeEEEecCCCcccCCCcceeeecCCCCcCceEEEEeeecCc----eEEEEEEeCCCCCCCCCCcceeEEEECCC
Q 004296 392 QDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIGPF 467 (763)
Q Consensus 392 ~d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~~i 467 (763)
.|++||+|||.+.+ +.+.+|||+|++||++++.+|++..| +.|.+++++. ....+|..||+|.|.|+
T Consensus 1 ~Dv~p~slGie~~~-------g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~--~~~~~n~~Lg~f~l~gi 71 (227)
T 1u00_A 1 MDVIPLSLGLETMG-------GLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGER--ELVQDCRSLARFALRGI 71 (227)
T ss_dssp CCBCSSCEEEEETT-------TEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSS--SBGGGSEEEEEEEECCC
T ss_pred CCcccceEEEEEeC-------CEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCC--ccCCCCCEEEEEEEeCC
Confidence 38999999999986 47899999999999999999998554 7788876643 23378999999999999
Q ss_pred CCCCCCcceEEEEEEEcCCccEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCCc
Q 004296 468 QGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHSS 547 (763)
Q Consensus 468 ~~~~~~~~~i~v~~~~d~~gil~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (763)
++++.|.++|+|+|.+|.||+|+|++.+
T Consensus 72 ~~~p~G~~~I~Vtf~iD~nGiL~V~a~d---------------------------------------------------- 99 (227)
T 1u00_A 72 PALPAGGAHIRVTFQVDADGLLSVTAME---------------------------------------------------- 99 (227)
T ss_dssp CCCSTTCSCEEEEEEECTTCCEEEEEEE----------------------------------------------------
T ss_pred CCCCCCceEEEEEEEECCCCcEEEEeec----------------------------------------------------
Confidence 9998888999999999999999998863
Q ss_pred ccccccccccceeeEEEeeeccCCCCHHHHHHHHHHHHHHhcCchhHHHHHHHhhhhHHHHHHHHHHhhhhhccCCCHHH
Q 004296 548 AVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQE 627 (763)
Q Consensus 548 ~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~e 627 (763)
+.++++..++|... ++||.++++++.+++.+|..+|+.++++.++||.||+|||++|+.|.+ +..++++++
T Consensus 100 ------~~tg~~~~i~i~~~--~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l~~-~~~~~~~~~ 170 (227)
T 1u00_A 100 ------KSTGVEASIQVKPS--YGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAA-DAALLSAAE 170 (227)
T ss_dssp ------TTTCCEEEEEECCC--SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HGGGSCHHH
T ss_pred ------ccccccceEEEEec--cCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHH
Confidence 22234456777655 469999999999999999999999999999999999999999999976 778999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHhchhhHHHhhhhhh
Q 004296 628 REGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDGE 676 (763)
Q Consensus 628 ~~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~ 676 (763)
|+++...|+++++|||++ ++++|++++++|+++++||..|++...
T Consensus 171 k~~i~~~l~~~~~wl~~~----d~~~~~~~~~~L~~~~~~i~~r~~~~~ 215 (227)
T 1u00_A 171 RQVIDDAAAHLSEVAQGD----DVDAIEQAIKNVDKQTQDFAARRMDQS 215 (227)
T ss_dssp HHHHHHHHHHHHHHTTSS----CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999954 489999999999999999999876443
No 13
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.95 E-value=1.7e-28 Score=263.69 Aligned_cols=227 Identities=19% Similarity=0.182 Sum_probs=169.1
Q ss_pred ecHHHHHHHHHHHHHHHHHhhcCCCcceEE--EEecCCCCHHHHHHHHHHHHHc--------C------CceeeeecchH
Q 004296 112 FCPVQVMGMLFSHLKDVAEKNLEMPVVDCV--IGVPSYFTDLQRREYLNAASIA--------G------LRPLRLIHDCT 175 (763)
Q Consensus 112 ~~~~~l~a~~L~~l~~~a~~~~~~~~~~~V--itVP~~~~~~qr~~l~~Aa~~A--------G------l~~~~li~Ep~ 175 (763)
+..+...++++..|+..++...+.+ .++| |+||++|+..||+++++++..+ | +..+.+++||+
T Consensus 95 ~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~ 173 (346)
T 2fsj_A 95 LASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGV 173 (346)
T ss_dssp TTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTH
T ss_pred ccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHH
Confidence 3446677778877776542222333 5799 9999999999999999997665 4 35688999999
Q ss_pred HHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCchHHHHHHHHHHHHHHHHhhhcc--c
Q 004296 176 ATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKI--N 253 (763)
Q Consensus 176 Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~--~ 253 (763)
|||++| +.... ..+...+++|||+||||||++++++.++. .+.+..++.++||.+|++.|++++.++ |+. +
T Consensus 174 AAa~~~-l~~~~-~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~----~g~~~~ 246 (346)
T 2fsj_A 174 GAALYL-LNQGI-IEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKE----TGFVVP 246 (346)
T ss_dssp HHHHHH-HHHTS-SCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHH----HCCCCC
T ss_pred HHHHHh-hcccc-ccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHH----hCCCcC
Confidence 999988 22211 11234789999999999999999987766 455545678999999999999877655 444 3
Q ss_pred ccccHHHHHHHHHHHHHHhhhcCCCCceeEEeecccCCcceEEEecHHHH-HHHHhhHHHHHHHHHHHHHHHcCCCCCCc
Q 004296 254 VYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEF-EELASGLTEKIAIPCRKALADAGLHVDKI 332 (763)
Q Consensus 254 ~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~ef-e~l~~~~~~~i~~~i~~~l~~~~~~~~~i 332 (763)
+.. ..++ ....+.+ .+. .++++++ +++++++++++...++++|+.+ .+++
T Consensus 247 i~~---------~~~e---------~~~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i 297 (346)
T 2fsj_A 247 FDL---------AQEA---------LSHPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRV 297 (346)
T ss_dssp HHH---------HHHH---------TTSCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGE
T ss_pred CCH---------HHHh---------cCCeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcc
Confidence 221 1222 0112332 222 3558999 9999999999999999999876 4578
Q ss_pred cEEEEecCCCChHHHHHHHHhhcCCCCcc---CCCchhHHhcchHHhhh
Q 004296 333 HSVEIVGSGSRIPAITRLLTSLFGREPRR---SLNASECVARGCALQCA 378 (763)
Q Consensus 333 ~~V~lvGG~srip~v~~~l~~~fg~~~~~---~~n~~eava~Gaa~~a~ 378 (763)
+.|+|+||+|++ +++.|++.|+. +.. ..||++|+|+|+..++.
T Consensus 298 ~~IvL~GGga~l--l~~~l~~~~~~-~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 298 TSLIPVGGGSNL--IGDRFEEIAPG-TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEEEEESTTHHH--HGGGGGGGSTT-CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred cEEEEECCcHHH--HHHHHHHHCcC-cEEeccCCCcHHHHHHHHHHHHh
Confidence 999999999999 99999999973 333 67999999999997664
No 14
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.95 E-value=1.3e-27 Score=261.51 Aligned_cols=305 Identities=17% Similarity=0.188 Sum_probs=198.8
Q ss_pred EEEEEccccceEEEEEeCCceEEEeCCCCCccceeEEEEcCCceEEcHhHHHhHhhCCcchHHHHHHhhCCCCCCHHHHh
Q 004296 3 VVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQK 82 (763)
Q Consensus 3 vvGID~Gtt~s~va~~~~~~~~ii~n~~~~r~~ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~~ 82 (763)
++|||+||++++++++.++++.+ +..|.+.+|+.+. .+ ....++..+...+|+++++.- .
T Consensus 15 ~vgiDiGt~~i~~~~~~~~~~~i--~~~g~~~~ps~~~-~~-----------g~i~d~~~~~~~ik~~~~~~~------~ 74 (377)
T 2ych_A 15 ALGLEIGASALKLVEVSGNPPAL--KALASRPTPPGLL-ME-----------GMVAEPAALAQEIKELLLEAR------T 74 (377)
T ss_dssp CEEEEECSSEEEEEEEETTTTEE--EEEEEEECCTTSE-ET-----------TEESCHHHHHHHHHHHHHHHT------C
T ss_pred eEEEEeCCCeEEEEEEeCCceEE--EEEEeEECCCCcc-cC-----------CCcCCHHHHHHHHHHHHHHcC------C
Confidence 68999999999999887665444 3345555565432 11 133567778888999887510 0
Q ss_pred hhhcCCceeeeCCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHH----------
Q 004296 83 DLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQ---------- 152 (763)
Q Consensus 83 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~q---------- 152 (763)
..+.+ .+..+...+...... ...++++++-.. ++..++.+++.++.+++|.+|. .+.+
T Consensus 75 ~~~~v---~~~i~~~~~~~~~~~---~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~~~ 142 (377)
T 2ych_A 75 RKRYV---VTALSNLAVILRPIQ---VPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQVQ 142 (377)
T ss_dssp CCCEE---EEEECGGGCEEEEEE---EECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSEEE
T ss_pred CcceE---EEEecCCcEEEEEEE---CCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEE--eCCCCCCCCcceeE
Confidence 00111 111222222221111 135777777654 3346677888899999999983 3222
Q ss_pred ----------HHHHHHHHHHcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEE
Q 004296 153 ----------RREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLS 222 (763)
Q Consensus 153 ----------r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~ 222 (763)
.+++++|++.|||++..++.||+|+|++|+.... ...+..++|||+||||||+++++ .|.+ .
T Consensus 143 v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~---~~~~~~~~vvDiGggttdi~i~~--~g~~--~- 214 (377)
T 2ych_A 143 VMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLA---EEPDRVFLVLDIGAESTSLVLLR--GDKP--L- 214 (377)
T ss_dssp EEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHH---TSTTCEEEEEEECSSCEEEEEEE--TTEE--E-
T ss_pred EEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcc---cccCCeEEEEEECCCcEEEEEEE--CCEE--E-
Confidence 3889999999999999999999999999875432 13457899999999999999986 3433 2
Q ss_pred EeCCCCCchHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCCCCceeEEeecccCCcceEEEecHHH
Q 004296 223 HAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREE 302 (763)
Q Consensus 223 ~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~e 302 (763)
..++.++||.+||+.|++. ++.+ +..||++|+.++.........+..++-.+....++|++
T Consensus 215 ~~~~~~~GG~~i~~~i~~~--------~~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~ 275 (377)
T 2ych_A 215 AVRVLTLSGKDFTEAIARS--------FNLD-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPGR 275 (377)
T ss_dssp EEEEESCSHHHHHHHHHHH--------TTCC-----------HHHHHHHHHHTC-------------------------C
T ss_pred EEEeeechHHHHHHHHHHH--------hCCC-----------HHHHHHHHhhcccccccccccccccccccccccCCHHH
Confidence 2346799999999999873 2332 36899999998754322111110111112345789999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHH--cCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchh
Q 004296 303 FEELASGLTEKIAIPCRKALAD--AGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASE 367 (763)
Q Consensus 303 fe~l~~~~~~~i~~~i~~~l~~--~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~e 367 (763)
|++++++.++++...|++.|+. ++.....++.|+|+||+|++|.+++.+++.||.++... ||++
T Consensus 276 ~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~-~P~~ 341 (377)
T 2ych_A 276 IYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPV-NPWE 341 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEEC-CGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEec-Cchh
Confidence 9999999999999999999986 35666689999999999999999999999998665433 4443
No 15
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.94 E-value=1.3e-25 Score=233.98 Aligned_cols=202 Identities=21% Similarity=0.299 Sum_probs=172.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHHHHHcCCceeeeecchHHHHHhhhccccCCCCCCcce
Q 004296 116 QVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSY 195 (763)
Q Consensus 116 ~l~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~ 195 (763)
+....+|++++..++...+..+..+++++|++|+..+|+.+..+++.+|+++..++.||+|++++|+.. .
T Consensus 71 ~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~----------~ 140 (272)
T 3h1q_A 71 IGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN----------D 140 (272)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS----------S
T ss_pred HHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC----------C
Confidence 455778888888888887888889999999999999999999999999999999999999999988742 2
Q ss_pred EEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCchHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHhhhc
Q 004296 196 IAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVL 275 (763)
Q Consensus 196 vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~L 275 (763)
.+|+|+|||||+++++. .+.+ + .....++||.+||+.|.+++. .+ ...|+++|+.+
T Consensus 141 ~~viDiGggst~~~~~~--~g~~--~-~~~~~~~Gg~~~~~~l~~~l~--------~~-----------~~~ae~~k~~~ 196 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIE--KGKI--T-ATFDEPTGGTHLSLVLAGSYK--------IP-----------FEEAETIKKDF 196 (272)
T ss_dssp EEEEEECSSCEEEEEEE--TTEE--E-EECCBSCCHHHHHHHHHHHHT--------CC-----------HHHHHHHHHSS
T ss_pred EEEEEECCCcEEEEEEE--CCEE--E-EEecCCCcHHHHHHHHHHHhC--------CC-----------HHHHHHHHHhc
Confidence 59999999999999986 4433 2 345789999999999998773 11 25789999887
Q ss_pred CCCCceeEEeecccCCcceEEEecHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhc
Q 004296 276 SANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLF 355 (763)
Q Consensus 276 s~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~f 355 (763)
+ ++++|++++.++++++...+.+.++..+ +++.|+|+||++++|++++.+++.|
T Consensus 197 ~----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l 250 (272)
T 3h1q_A 197 S----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL 250 (272)
T ss_dssp T----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH
T ss_pred C----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh
Confidence 6 5899999999999999999999998764 4789999999999999999999999
Q ss_pred CCCCccCCCchhHHhcchHHhh
Q 004296 356 GREPRRSLNASECVARGCALQC 377 (763)
Q Consensus 356 g~~~~~~~n~~eava~Gaa~~a 377 (763)
+.++..+.||++++|+|||++|
T Consensus 251 ~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 251 GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp SSCCBCCSSGGGHHHHHHHTTC
T ss_pred CCCccccCChHHHHHHHHHhcC
Confidence 9999889999999999999875
No 16
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.94 E-value=3.9e-26 Score=218.31 Aligned_cols=160 Identities=19% Similarity=0.307 Sum_probs=136.2
Q ss_pred cceEEEecccceeEEEecCCCcccCCCcceeeecCCCCcCceEEEEeeecCc----eEEEEEEeCCCCCCCCCCcceeEE
Q 004296 387 REYEVQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCF 462 (763)
Q Consensus 387 ~~~~~~d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~ 462 (763)
..+.+.|++|++||++|.+ +.+.+|||||++||++++.+|++..| +.|.+++++ ..+ ..+|..||+|
T Consensus 18 ~~f~l~DV~P~slGie~~g-------g~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE-~~~-~~dn~~LG~f 88 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIETLG-------GVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGE-REM-AGDNKLLGQF 88 (182)
T ss_dssp ------CBCSSCEEEECTT-------SBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESS-CSB-GGGSEEEEEE
T ss_pred CCEEEEEecCCEEEEEEeC-------CEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcC-ccc-cccCceEEEE
Confidence 3688999999999999986 47899999999999999999998665 778874443 333 4789999999
Q ss_pred EECCCCCCCCCcceEEEEEEEcCCccEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCcccccccccccccc
Q 004296 463 TIGPFQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSK 542 (763)
Q Consensus 463 ~i~~i~~~~~~~~~i~v~~~~d~~gil~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (763)
.|.|+|+++.|.++|+|+|.+|.||+|+|++.+
T Consensus 89 ~l~gipp~p~G~~~IeVtf~iD~nGiL~VsA~d----------------------------------------------- 121 (182)
T 3n8e_A 89 TLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKD----------------------------------------------- 121 (182)
T ss_dssp EECCCCCCCTTCSCEEEEEEECTTCCEEEEEEE-----------------------------------------------
T ss_pred EEcCCCCCCCCCeeEEEEEEEecCCEEEEEEEE-----------------------------------------------
Confidence 999999999999999999999999999998874
Q ss_pred CCCCcccccccccccceeeEEEeeeccCCCCHHHHHHHHHHHHHHhcCchhHHHHHHHhhhhHHHHHHHHHHh
Q 004296 543 SSHSSAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKL 615 (763)
Q Consensus 543 ~~~~~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l 615 (763)
+.++++..++|+.. ++||+++++++++++.+|+.+|++.+++.++||.||+|+|++|++|
T Consensus 122 -----------~~tg~~~~i~I~~~--~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy~~~~~l 181 (182)
T 3n8e_A 122 -----------KGTGREQQIVIQSS--GGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKM 181 (182)
T ss_dssp -----------TTTCCEEEEEESCC--CCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHCCSCCC
T ss_pred -----------cCCCCEeeEEEecC--ccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44556677888766 5799999999999999999999999999999999999999998766
No 17
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.92 E-value=1.9e-24 Score=237.19 Aligned_cols=199 Identities=15% Similarity=0.107 Sum_probs=157.9
Q ss_pred HHHHHHHHHHHHcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCc
Q 004296 151 LQRREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLG 230 (763)
Q Consensus 151 ~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lG 230 (763)
...+.+.+|++.|||++..++.||+|||++|+... .+...+++||+||||||++++. +|.+.. .++.++|
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~-----~~~~gv~vvDiGggttdisi~~--~g~~~~---~~~i~~G 237 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTP-----EKDRGVVVVNLGYNFTGLIAYK--NGVPIK---ISYVPVG 237 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHH-----HHHHCEEEEEECSSSEEEEEEE--TTEEEE---EEEESCC
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccc-----cccCCEEEEEECCCcEEEEEEE--CCEEEE---EEecccH
Confidence 45678999999999999999999999999886432 3356899999999999999986 554432 3367999
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCCC-----CceeEEeecccCCcceEEEecHHHHHH
Q 004296 231 GRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSAN-----AEAPLNIECLMDEKDVRGFIKREEFEE 305 (763)
Q Consensus 231 G~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~-----~~~~i~i~~l~~~~d~~~~itr~efe~ 305 (763)
|++||+.|+..+. . ...+||++|+.++.. ....+.++.+.. .....++|++|.+
T Consensus 238 G~~it~dIa~~l~--------~-----------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~--~~~~~is~~~l~~ 296 (419)
T 4a2a_A 238 MKHVIKDVSAVLD--------T-----------SFEESERLIITHGNAVYNDLKEEEIQYRGLDG--NTIKTTTAKKLSV 296 (419)
T ss_dssp HHHHHHHHHHHHT--------C-----------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTTS--CSEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHC--------C-----------CHHHHHHHHHHhccCcccCCCCceEEEeecCC--ccceEEcHHHHHH
Confidence 9999999987542 2 127899999998642 344677776532 4677999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHcCC------CCCCccEEEEecCCCChHHHHHHHHhhcCCCCccC-----------------
Q 004296 306 LASGLTEKIAIPCRKALADAGL------HVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRS----------------- 362 (763)
Q Consensus 306 l~~~~~~~i~~~i~~~l~~~~~------~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~----------------- 362 (763)
+++|.++++...+.+.|+.++. ....++.|+|+||+|++|.|++.+++.||.++...
T Consensus 297 ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~~~~~~~ 376 (419)
T 4a2a_A 297 IIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIINADEVA 376 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCBTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhccCccccc
Confidence 9999999999999999999998 34568999999999999999999999998654321
Q ss_pred CCchhHHhcchHHhhhhh
Q 004296 363 LNASECVARGCALQCAML 380 (763)
Q Consensus 363 ~n~~eava~Gaa~~a~~~ 380 (763)
.+|..++|.|.+++++..
T Consensus 377 ~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 377 NDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp TCGGGHHHHHTTCC----
T ss_pred CCchHHHHHHHHHHHhhc
Confidence 378999999999888643
No 18
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.92 E-value=1.4e-24 Score=240.52 Aligned_cols=227 Identities=12% Similarity=0.048 Sum_probs=166.1
Q ss_pred cceEEEEecCCCCHHHHHHHHHHH-HHcCCceeeeecchHHHHHh-hhccccCCCCCCcceEEEEEeCCceeEEEEEEEe
Q 004296 137 VVDCVIGVPSYFTDLQRREYLNAA-SIAGLRPLRLIHDCTATALG-YGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFE 214 (763)
Q Consensus 137 ~~~~VitVP~~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~-y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~ 214 (763)
...+|||+|++|+..+|+++.+++ +.+|++.+.+++||+||+++ |.. ..++.... +.+|||+|+||||++++.
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~--~~~~~~~~-~glVvDiG~gtt~v~~v~-- 181 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTS--RQVGERTL-TGTVIDSGDGVTHVIPVA-- 181 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGS--TTCCSCCC-CEEEEEESSSCEEEEEEE--
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcc--cccCCCCC-eEEEEEcCCCceEEEEeE--
Confidence 357999999999999999999999 88999999999999999877 421 11111223 679999999999999985
Q ss_pred CCeEEEEEEeCCCCCchHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCCCC---------------
Q 004296 215 AGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANA--------------- 279 (763)
Q Consensus 215 ~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~--------------- 279 (763)
.|.. +.....+.++||++||+.|.++|..++. ......+ ...++++|+.++...
T Consensus 182 ~G~~-~~~~~~~~~lGG~~lt~~l~~~l~~~~~---~~~~~~~-------~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~ 250 (418)
T 1k8k_A 182 EGYV-IGSCIKHIPIAGRDITYFIQQLLRDREV---GIPPEQS-------LETAKAVKERYSYVCPDLVKEFNKYDTDGS 250 (418)
T ss_dssp TTEE-CGGGCEEESCSHHHHHHHHHHHHHTTCC---CCCGGGH-------HHHHHHHHHHHCCCCSCHHHHHHHHHHSGG
T ss_pred CCEE-cccceEEEeCcHHHHHHHHHHHHHhcCC---CCCCHHH-------HHHHHHHHHhhchhcccHHHHHHhhccccc
Confidence 4432 3222346789999999999999975431 1211111 256788888775432
Q ss_pred --ceeEEeecccCCcceEEEecHHHH---HHHHhhHH------HHHHHHHHHHHHHcC--CCCCCccEEEEecCCCChHH
Q 004296 280 --EAPLNIECLMDEKDVRGFIKREEF---EELASGLT------EKIAIPCRKALADAG--LHVDKIHSVEIVGSGSRIPA 346 (763)
Q Consensus 280 --~~~i~i~~l~~~~d~~~~itr~ef---e~l~~~~~------~~i~~~i~~~l~~~~--~~~~~i~~V~lvGG~srip~ 346 (763)
...+.++....+....+.|+++.| |.+++|.+ ..+..+|.++|..+. +....++.|+|+||+|++|+
T Consensus 251 ~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg 330 (418)
T 1k8k_A 251 KWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRD 330 (418)
T ss_dssp GTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTT
T ss_pred ccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCcccccc
Confidence 124555555455566889999999 66666543 568889999998864 44556789999999999999
Q ss_pred HHHHHHhhcCC------------------------CCccCCCchhHHhcchHHhhhh
Q 004296 347 ITRLLTSLFGR------------------------EPRRSLNASECVARGCALQCAM 379 (763)
Q Consensus 347 v~~~l~~~fg~------------------------~~~~~~n~~eava~Gaa~~a~~ 379 (763)
++++|++.++. .+..+.++..++.+||+++|..
T Consensus 331 ~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 331 FGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 99999876641 1223346779999999999873
No 19
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.91 E-value=1.7e-24 Score=235.89 Aligned_cols=213 Identities=14% Similarity=0.143 Sum_probs=153.7
Q ss_pred ceEEEEecCCCCHHHHHHHHHHH-HHcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCC
Q 004296 138 VDCVIGVPSYFTDLQRREYLNAA-SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAG 216 (763)
Q Consensus 138 ~~~VitVP~~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~ 216 (763)
..++||+|++++..+|+++.+++ +.+|++.+.+++||+|||++|+. .+.+|||+|+|||+++.+. +|
T Consensus 101 ~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~----------~~~lVvDiG~gtt~v~~v~--~G 168 (375)
T 2fxu_A 101 HPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR----------TTGIVLDSGDGVTHNVPIY--EG 168 (375)
T ss_dssp SCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC----------SSEEEEEECSSCEEEEEEE--TT
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCC----------CeEEEEEcCCCceEEeEeE--CC
Confidence 45999999999999999888765 88899999999999999998874 3689999999999987763 55
Q ss_pred eEEEEEEeCCCCCchHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCC----------------CCc
Q 004296 217 HMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSA----------------NAE 280 (763)
Q Consensus 217 ~~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~----------------~~~ 280 (763)
.. +.......++||++||+.|.+++..+ .+......+ ...++++|+.++. ...
T Consensus 169 ~~-~~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~-------~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~ 237 (375)
T 2fxu_A 169 YA-LPHAIMRLDLAGRDLTDYLMKILTER---GYSFVTTAE-------REIVRDIKEKLCYVALDFENEMATAASSSSLE 237 (375)
T ss_dssp EE-CGGGCEEESCCHHHHHHHHHHHHHHH---TCCCCSHHH-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred EE-eccceEEeccCHHHHHHHHHHHHHhc---CCCCCcHHH-------HHHHHHHHHHHHhhcccHHHHHHhhcccCccC
Confidence 32 32223457899999999999999764 122111111 1344555555432 222
Q ss_pred eeEEeecccCCcceEEEecHHHH---HHHHhhH-----HHHHHHHHHHHHHHcC--CCCCCccEEEEecCCCChHHHHHH
Q 004296 281 APLNIECLMDEKDVRGFIKREEF---EELASGL-----TEKIAIPCRKALADAG--LHVDKIHSVEIVGSGSRIPAITRL 350 (763)
Q Consensus 281 ~~i~i~~l~~~~d~~~~itr~ef---e~l~~~~-----~~~i~~~i~~~l~~~~--~~~~~i~~V~lvGG~srip~v~~~ 350 (763)
..+.++ ++ ..+.|+++.| |.+++|. ...+..+|.++|..+. +....++.|+|+||+|++|+++++
T Consensus 238 ~~~~lp---dg--~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~r 312 (375)
T 2fxu_A 238 KSYELP---DG--QVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADR 312 (375)
T ss_dssp EEEECT---TS--CEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHH
T ss_pred eEEECC---CC--CEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHH
Confidence 233333 22 3567888888 4455553 3567888888887652 223345789999999999999999
Q ss_pred HHhhcC--------CCCccCCCchhHHhcchHHhhh
Q 004296 351 LTSLFG--------REPRRSLNASECVARGCALQCA 378 (763)
Q Consensus 351 l~~~fg--------~~~~~~~n~~eava~Gaa~~a~ 378 (763)
|.+.++ .++....+|..++++||+++|.
T Consensus 313 l~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 313 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp HHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 999885 2334567899999999999997
No 20
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.89 E-value=1.1e-22 Score=189.51 Aligned_cols=147 Identities=18% Similarity=0.302 Sum_probs=128.2
Q ss_pred EEecccceeEEEecCCCcccCCCcceeeecCCCCcCceEEEEeeecCc----eEEEEEEeCCCCCCCCCCcceeEEEECC
Q 004296 391 VQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIGP 466 (763)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~~ 466 (763)
+.|++|||||++|.+ +.+.+|||||+++|++++.+|++..| +.|.+|+++ ..+ ..+|.+||+|.|.|
T Consensus 2 ~~Dv~p~slGi~~~g-------g~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe-~~~-~~dn~~LG~f~l~g 72 (152)
T 3h0x_A 2 NADVNALTLGIETTG-------GVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGE-RAM-SKDNNLLGKFELTG 72 (152)
T ss_dssp -CCBCSSCEEEEETT-------TEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESS-CSB-GGGSEEEEEEEECC
T ss_pred ccceeccEEEEEEcC-------CEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcC-ccc-cccCcEEEEEEEeC
Confidence 579999999999986 47899999999999999999998665 577774443 333 48899999999999
Q ss_pred CCCCCCCcceEEEEEEEcCCccEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCC
Q 004296 467 FQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHS 546 (763)
Q Consensus 467 i~~~~~~~~~i~v~~~~d~~gil~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (763)
+++++.|.++|+|+|.+|.||+|+|++.+
T Consensus 73 ipp~p~G~~~I~Vtf~iD~nGiL~V~a~d--------------------------------------------------- 101 (152)
T 3h0x_A 73 IPPAPRGVPQIEVTFALDANGILKVSATD--------------------------------------------------- 101 (152)
T ss_dssp CCCCCTTCSCEEEEEEECTTSEEEEEEEE---------------------------------------------------
T ss_pred CCCCCCCCceEEEEEEEcCCCEEEEEEEE---------------------------------------------------
Confidence 99999999999999999999999999974
Q ss_pred cccccccccccceeeEEEeeeccCCCCHHHHHHHHHHHHHHhcCchhHHHHHHHhhhhH
Q 004296 547 SAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALE 605 (763)
Q Consensus 547 ~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LE 605 (763)
+.++++..++|.... ++||+++++++.+++.+|+.+|++.+++.++||+||
T Consensus 102 -------~~tg~~~~i~I~~~~-~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 102 -------KGTGKSESITITNDK-GRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp -------TTTCCEEEEEEECCT-TCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred -------cCCCcEeEEEEecCC-CCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 445667788888764 579999999999999999999999999999999997
No 21
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.88 E-value=1.4e-22 Score=188.41 Aligned_cols=147 Identities=16% Similarity=0.283 Sum_probs=124.1
Q ss_pred EEecccceeEEEecCCCcccCCCcceeeecCCCCcCceEEEEeeecCc----eEEEEEEeCCCCCCCCCCcceeEEEECC
Q 004296 391 VQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIGP 466 (763)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~~ 466 (763)
+.|++|||||++|.+ +.+.+|||+|+++|++++.+|++..| +.|.+|+++ .. ...+|.+||+|.|.|
T Consensus 2 ~~Dv~p~slGie~~g-------g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe-~~-~~~dn~~LG~f~l~g 72 (152)
T 3dob_A 2 NADVAPLSLGIETAG-------GVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGE-RA-MTRDNHRLGTFELSG 72 (152)
T ss_dssp --CBCSSCEEEEETT-------TEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESS-CS-BGGGSEEEEEEEEEC
T ss_pred ceeeecceEEEEEcC-------CEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcC-cc-ccccCceeEEEEEeC
Confidence 679999999999986 47899999999999999999998665 467774433 33 358899999999999
Q ss_pred CCCCCCCcceEEEEEEEcCCccEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCC
Q 004296 467 FQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHS 546 (763)
Q Consensus 467 i~~~~~~~~~i~v~~~~d~~gil~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (763)
+++++.|.++|+|+|.+|.||+|+|++.+
T Consensus 73 ipp~p~G~~~IeVtf~iD~nGiL~Vsa~d--------------------------------------------------- 101 (152)
T 3dob_A 73 IPPAPRGVPQIEVTFNIDANGILNVSAED--------------------------------------------------- 101 (152)
T ss_dssp CCCCCTTCCCEEEEEEECTTCCEEEEEEE---------------------------------------------------
T ss_pred CCCCCCCCceEEEEEEeCCCCeEEEEEEE---------------------------------------------------
Confidence 99999999999999999999999999974
Q ss_pred cccccccccccceeeEEEeeeccCCCCHHHHHHHHHHHHHHhcCchhHHHHHHHhhhhH
Q 004296 547 SAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALE 605 (763)
Q Consensus 547 ~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LE 605 (763)
+.++++..++|+... +.||+++++++.++..++..+|++.+++.++||.||
T Consensus 102 -------~~tg~~~~i~I~~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 102 -------KSTGKSNRITIQNEK-GRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp -------TTTCCEEEEEECCC-----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred -------cCCCCEEEEEEEcCC-CCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 445666788887664 469999999999999999999999999999999987
No 22
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.88 E-value=1.6e-22 Score=187.79 Aligned_cols=146 Identities=19% Similarity=0.299 Sum_probs=126.3
Q ss_pred EEecccceeEEEecCCCcccCCCcceeeecCCCCcCceEEEEeeecCc----eEEEEEEeCCCCCCCCCCcceeEEEECC
Q 004296 391 VQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIGP 466 (763)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~~ 466 (763)
+.|++|||||++|.+ +.+.+|||||+++|++++.+|++..| +.|.+|+++ ..+ ..+|.+||+|.|.|
T Consensus 2 ~~DV~p~slGie~~g-------g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe-~~~-~~dn~~LG~f~l~g 72 (151)
T 3dqg_A 2 NADVTPLSLGIETLG-------GIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGE-REM-ATSNKLLGQFSLVG 72 (151)
T ss_dssp --CBCSSCEEEEETT-------TEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESS-CSB-GGGSEEEEEEEEEC
T ss_pred cceeeeeEEEEEEcC-------CEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcC-Ccc-cccCcEEEEEEEeC
Confidence 579999999999986 47899999999999999999998665 677774433 333 48899999999999
Q ss_pred CCCCCCCcceEEEEEEEcCCccEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCC
Q 004296 467 FQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHS 546 (763)
Q Consensus 467 i~~~~~~~~~i~v~~~~d~~gil~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (763)
+++++.|.++|+|+|.+|.||+|+|++.+
T Consensus 73 ipp~p~G~~~IeVtf~iD~nGiL~Vsa~d--------------------------------------------------- 101 (151)
T 3dqg_A 73 IPPAPRGVPQVEVTFDIDANGIVNVSARD--------------------------------------------------- 101 (151)
T ss_dssp CCCCCTTCSCEEEEEEECTTSEEEEEEEE---------------------------------------------------
T ss_pred CCCCCCCCcEEEEEEEeccCcEEEEEEEE---------------------------------------------------
Confidence 99999998999999999999999999874
Q ss_pred cccccccccccceeeEEEeeeccCCCCHHHHHHHHHHHHHHhcCchhHHHHHHHhhhhH
Q 004296 547 SAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALE 605 (763)
Q Consensus 547 ~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LE 605 (763)
+.++++..++|+.. ++||+++++++.+++.++..+|++.+++.++||.||
T Consensus 102 -------~~tg~~~~i~I~~~--~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 102 -------RGTGKEQQIVIQSS--GGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp -------TTTCCEEEEEEECS--SSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred -------ccCCCEeEEEEecC--CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 44566678888865 579999999999999999999999999999999986
No 23
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.87 E-value=1.9e-22 Score=214.87 Aligned_cols=227 Identities=13% Similarity=0.086 Sum_probs=149.8
Q ss_pred eeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCC-CCHH--HH--HHHHHH------------HHHcCCceeeeec
Q 004296 110 HTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSY-FTDL--QR--REYLNA------------ASIAGLRPLRLIH 172 (763)
Q Consensus 110 ~~~~~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVP~~-~~~~--qr--~~l~~A------------a~~AGl~~~~li~ 172 (763)
..+++..+++.+ ..|+. +. ..+.+ .++|+++|.. |... || .++.+- ++.+++..+.++.
T Consensus 72 ~~~~~~~l~~i~-~aL~~-~~-~~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 147 (320)
T 2zgy_A 72 WQYSDVNVVAVH-HALLT-SG-LPVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMP 147 (320)
T ss_dssp GGGSHHHHHHHH-HHHHH-HS-CCSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEE
T ss_pred ccchHHHHHHHH-HHHHH-cC-CCCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEec
Confidence 357777777654 44443 21 11222 4699999987 6541 22 222221 2344567889999
Q ss_pred chHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCchHHHHHHHHHHHHHHHHhhhcc
Q 004296 173 DCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKI 252 (763)
Q Consensus 173 Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~ 252 (763)
||.||+++|+... .++..++|+|+||||||+++++ ++.+.+.+..++.++||.+||+.|++++.++ +.
T Consensus 148 e~~aa~~~~~~~~-----~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~ 215 (320)
T 2zgy_A 148 ESIPAGYEVLQEL-----DELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RT 215 (320)
T ss_dssp SSHHHHHHHHHHS-----CTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SB
T ss_pred CcHHHHHhhhccc-----cCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-----CC
Confidence 9999999886321 3467999999999999999987 4555566666788999999999999988642 33
Q ss_pred cccccHHHHHHHHHHHHHH-hhhcCCCCceeEEeecccCCcceEEEecHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCC
Q 004296 253 NVYSNVRACIRLRAACEKL-KKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDK 331 (763)
Q Consensus 253 ~~~~~~~~~~rL~~~ae~~-K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~ 331 (763)
++.. ..++++ |..- ... ......+ . .-.++++.+++++.++++...|.+.+++. .+
T Consensus 216 ~i~~---------~~ae~~lk~~~---~~~--~~~~~i~---~--~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~ 272 (320)
T 2zgy_A 216 KGSS---------YLADDIIIHRK---DNN--YLKQRIN---D--ENKISIVTEAMNEALRKLEQRVLNTLNEF----SG 272 (320)
T ss_dssp GGGH---------HHHHHHHHTTT---CHH--HHHHHSS---S--SCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CC
T ss_pred CCCH---------HHHHHHHHHhh---hhh--cccceec---C--chhhHHHHHHHHHHHHHHHHHHHHHHHhh----cC
Confidence 3321 234444 3320 000 0000000 0 01345566666666666666666666542 47
Q ss_pred ccEEEEecCCCChHHHHHHHHhhcCC---CCccCCCchhHHhcchHHhh
Q 004296 332 IHSVEIVGSGSRIPAITRLLTSLFGR---EPRRSLNASECVARGCALQC 377 (763)
Q Consensus 332 i~~V~lvGG~srip~v~~~l~~~fg~---~~~~~~n~~eava~Gaa~~a 377 (763)
++.|+|+||+|++ +++.|++.|+. ++....||++|+|+||++++
T Consensus 273 ~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 273 YTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred CCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 8999999999998 99999999986 57778899999999999875
No 24
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.86 E-value=2.6e-21 Score=181.58 Aligned_cols=147 Identities=15% Similarity=0.266 Sum_probs=126.4
Q ss_pred EEecccceeEEEecCCCcccCCCcceeeecCCCCcCceEEEEeeecCc----eEEEEEEeCCCCCCCCCCcceeEEEECC
Q 004296 391 VQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIGP 466 (763)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~~ 466 (763)
+.|++||+||+++.+ +.+.+||++|+++|++++.+|++..| +.|.+++++.. ...+|..||+|.|.|
T Consensus 2 v~Dv~p~slGi~~~~-------g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~--~~~~n~~lg~~~l~g 72 (152)
T 2op6_A 2 NADVNPLTLGIETVG-------GVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERP--MVMDNHKLGNFDVTG 72 (152)
T ss_dssp -CCBCSSCEEEEETT-------TEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCS--BGGGSEEEEEEEECC
T ss_pred ceEeecccEEEEEeC-------CEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCc--cCccCCEeEEEEEEC
Confidence 579999999999986 47899999999999999999998665 78888776432 236899999999999
Q ss_pred CCCCCCCcceEEEEEEEcCCccEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCC
Q 004296 467 FQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHS 546 (763)
Q Consensus 467 i~~~~~~~~~i~v~~~~d~~gil~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (763)
+++++.|.++|+|+|.+|.||+|+|++.+
T Consensus 73 ipp~p~G~~~I~V~f~id~nGiL~V~a~d--------------------------------------------------- 101 (152)
T 2op6_A 73 IPPAPRGVPQIEVTFEIDVNGILHVSAED--------------------------------------------------- 101 (152)
T ss_dssp CCCCCTTCSCEEEEEEECTTSCEEEEEEE---------------------------------------------------
T ss_pred CCCCCCCCceEEEEEEECCCcEEEEEEEE---------------------------------------------------
Confidence 99998888999999999999999999863
Q ss_pred cccccccccccceeeEEEeeeccCCCCHHHHHHHHHHHHHHhcCchhHHHHHHHhhhhH
Q 004296 547 SAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALE 605 (763)
Q Consensus 547 ~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LE 605 (763)
+.++++..++|.... ++||+++++++.+++.+|..+|+..+++.++||+||
T Consensus 102 -------~~tg~~~~i~i~~~~-~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 102 -------KGTGNKNKLTITNDH-NRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp -------TTTCCEEEEEECSSS-SCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred -------ecCCcEEEEEeeccc-cCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 223345567776654 579999999999999999999999999999999987
No 25
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.78 E-value=1.1e-18 Score=181.75 Aligned_cols=186 Identities=17% Similarity=0.155 Sum_probs=124.9
Q ss_pred HcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCchHHHHHHHHHH
Q 004296 162 IAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGY 241 (763)
Q Consensus 162 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~ 241 (763)
.++...+..|+|++|.++++.... +....|+|+|||+++++++. .+|.+.+....+++..||.+|+..++++
T Consensus 68 ~a~~~~~~~Vne~~aha~a~~~~~-------~~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~ 139 (276)
T 4ehu_A 68 MNYSDADKQISELSCHARGVNFII-------PETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKI 139 (276)
T ss_dssp GGCCSCSEECCHHHHHHHHHHHHS-------TTCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHH
T ss_pred HHhhCCCcccchHHHHHHHHHHhC-------CCCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHH
Confidence 366778899999999998876543 23457899999999999884 5678888888889999999999999988
Q ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHhhh--cCCCCceeEEeecccCCcce-EEEecHHHHHHHHhhHHHHHHHHH
Q 004296 242 FAAKFKEQYKINVYSNVRACIRLRAACEKLKKV--LSANAEAPLNIECLMDEKDV-RGFIKREEFEELASGLTEKIAIPC 318 (763)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~--Ls~~~~~~i~i~~l~~~~d~-~~~itr~efe~l~~~~~~~i~~~i 318 (763)
+.-.+..... .+..++.. ++..... .... ++ ...-.....++++..+++.+...+
T Consensus 140 l~~~~~~~~~---------------~~~~a~~~~~i~~~~~~--f~~s-----~~~~~~~~~~~~~di~a~~~~~v~~~l 197 (276)
T 4ehu_A 140 IEVDVSELGS---------------ISMNSQNEVSISSTCTV--FAES-----EVISHLSENAKIEDIVAGIHTSVAKRV 197 (276)
T ss_dssp HTCCGGGHHH---------------HHTTCSSCCCCCCCSHH--HHHH-----HHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred hccChhhhHH---------------HHhcCCCCCCcCCccch--hhhh-----HHHHhhhccccHHHHHHHHHHHHHHHH
Confidence 7533321110 01111110 0000000 0000 00 000000113456666666666555
Q ss_pred HHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhhhhhC
Q 004296 319 RKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLS 381 (763)
Q Consensus 319 ~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a~~~s 381 (763)
.....+. ..++.|+|+||.+++|.|++.+++.||.++..+.||++++|+|||++|....
T Consensus 198 ~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 198 SSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHhc----ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 5544443 3567899999999999999999999999999999999999999999997543
No 26
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.77 E-value=4.6e-20 Score=201.95 Aligned_cols=214 Identities=14% Similarity=0.148 Sum_probs=91.3
Q ss_pred ceEEEEecCCCCHHHHHHHHHHH-HHcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCC
Q 004296 138 VDCVIGVPSYFTDLQRREYLNAA-SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAG 216 (763)
Q Consensus 138 ~~~VitVP~~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~ 216 (763)
..++||+|++++..+|+++.+.+ +.+|++.+.++++|.||+++++. .+.+|+|+|+|+|+++.+. +|
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~----------~~~lVVDiG~g~T~v~pv~--~G 172 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL----------LTGVVVDSGDGVTHICPVY--EG 172 (394)
T ss_dssp -----------------------------------------------------------CCEEEECSSCEEEECEE--TT
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC----------ceEEEEEcCCCceEeeeeE--CC
Confidence 35999999999999999998865 78899999999999999988764 3569999999999998764 34
Q ss_pred eEEEEEEeCCCCCchHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCCCC----------------c
Q 004296 217 HMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANA----------------E 280 (763)
Q Consensus 217 ~~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~----------------~ 280 (763)
.+ +.......++||+++|..|.+++..+ .+......+ ...++.+|+.++.-. .
T Consensus 173 ~~-~~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~ 241 (394)
T 1k8k_B 173 FS-LPHLTRRLDIAGRDITRYLIKLLLLR---GYAFNHSAD-------FETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241 (394)
T ss_dssp EE-CSTTCEEESCCHHHHHHHHHHHHHHT---TCCCCTTTT-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred EE-cccceEEeeccHHHHHHHHHHHHHhc---CCCCCcHHH-------HHHHHHHHHhheeEecCHHHHHHhhccCCcCc
Confidence 32 21112246899999999999999753 122211111 145666666654321 1
Q ss_pred eeEEeecccCCcceEEEecHHHHH---HHHhhH-----HHHHHHHHHHHHHHcCC--CCCCccEEEEecCCCChHHHHHH
Q 004296 281 APLNIECLMDEKDVRGFIKREEFE---ELASGL-----TEKIAIPCRKALADAGL--HVDKIHSVEIVGSGSRIPAITRL 350 (763)
Q Consensus 281 ~~i~i~~l~~~~d~~~~itr~efe---~l~~~~-----~~~i~~~i~~~l~~~~~--~~~~i~~V~lvGG~srip~v~~~ 350 (763)
..+.++ ++ ..+.|+++.|. -+++|. ...|...|.+.|..+.. ...-++.|+|+||+|++|++.++
T Consensus 242 ~~~~lp---dg--~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~r 316 (394)
T 1k8k_B 242 ESYTLP---DG--RIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSR 316 (394)
T ss_dssp EEEECT---TS--CEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHH
T ss_pred eEEECC---CC--CEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHH
Confidence 112222 22 25677888773 333332 24577888888888643 23345789999999999999999
Q ss_pred HHhhcCC-----------------CC--ccCCCchhHHhcchHHhhhh
Q 004296 351 LTSLFGR-----------------EP--RRSLNASECVARGCALQCAM 379 (763)
Q Consensus 351 l~~~fg~-----------------~~--~~~~n~~eava~Gaa~~a~~ 379 (763)
|.+.++. ++ ..+.++..++.+|++++|..
T Consensus 317 l~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 317 LERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp HHHHHHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred HHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 9887742 22 22456778999999998863
No 27
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.71 E-value=5.1e-17 Score=174.33 Aligned_cols=208 Identities=14% Similarity=0.173 Sum_probs=140.6
Q ss_pred ceEEEEecCCCCHHHH-HHHHHHHHHcCC------------ceeeeecchHHHHHhhhccccCCCCC---CcceEEEEEe
Q 004296 138 VDCVIGVPSYFTDLQR-REYLNAASIAGL------------RPLRLIHDCTATALGYGIYKTDFANG---GKSYIAFVDI 201 (763)
Q Consensus 138 ~~~VitVP~~~~~~qr-~~l~~Aa~~AGl------------~~~~li~Ep~Aaal~y~~~~~~~~~~---~~~~vlv~D~ 201 (763)
..+++++|..+...+| +++++++...+- ..+.++.||.||+++|+.... +.. .+..++|+|+
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~--~~~~~~~~~~~~vvDi 191 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENG--KVFKAFTEGKYSVLDF 191 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETT--EECHHHHTCEEEEEEE
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccC--ccccccccCcEEEEEe
Confidence 4789999999888887 589998875442 467899999999999876431 101 3678999999
Q ss_pred CCceeEEEEEEEeCCeEEEEEEeCCCCCchHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCCCCce
Q 004296 202 GHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEA 281 (763)
Q Consensus 202 GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~ 281 (763)
||||||++++ .++.+ +....+...+||..+++.|.+++.+++. +..+.. ...++.+.
T Consensus 192 GggTtd~~v~--~~~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~~---------~~i~~g~~-------- 248 (355)
T 3js6_A 192 GSGTTIIDTY--QNMKR-VEEESFVINKGTIDFYKRIASHVSKKSE---GASITP---------RMIEKGLE-------- 248 (355)
T ss_dssp CSSCEEEEEE--ETTEE-CGGGCEEESCCHHHHHHHHHHHTC-----------CH---------HHHHSCCC--------
T ss_pred CCCcEEEEEE--cCCEE-ccccccCcchHHHHHHHHHHHHHHHhcC---CCcCCH---------HHHhcCCc--------
Confidence 9999999998 34433 1112234679999999999999976532 222221 11111111
Q ss_pred eEEeecccCCcceEEEecHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHH--HHHHHHhhcCCCC
Q 004296 282 PLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPA--ITRLLTSLFGREP 359 (763)
Q Consensus 282 ~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~--v~~~l~~~fg~~~ 359 (763)
+.... .+..-...+ .+.+++.+++++++|...|.+.+.+ ++.++.|+|+||++.++. |.+.|++.|+..
T Consensus 249 -~~~~~--~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~- 319 (355)
T 3js6_A 249 -YKQCK--LNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA- 319 (355)
T ss_dssp ----------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC-
T ss_pred -ccccc--ccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC-
Confidence 00000 000001112 3456777888888888888777753 457899999999999998 999999999542
Q ss_pred ccCCCchhHHhcchHHhhhhhCC
Q 004296 360 RRSLNASECVARGCALQCAMLSP 382 (763)
Q Consensus 360 ~~~~n~~eava~Gaa~~a~~~s~ 382 (763)
.||..|+|+|+..++..+..
T Consensus 320 ---~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 320 ---DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp ---SSGGGHHHHHHHHHHHHHHH
T ss_pred ---CCcHHHHHHHHHHHHHHHHh
Confidence 89999999999999887653
No 28
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.58 E-value=6.9e-15 Score=133.97 Aligned_cols=101 Identities=15% Similarity=0.244 Sum_probs=82.8
Q ss_pred ccceEEEecccceeEEEecCCCcccCCCcceeeecCCCCcCceEEEEeeecCc----eEEEEEEeCCCCCCCCCCcceeE
Q 004296 386 VREYEVQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSC 461 (763)
Q Consensus 386 ~~~~~~~d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~ 461 (763)
++++.+.|++|++||+++.+ +.+.+||+||+++|++++.+|++..| +.|.+++++.. ...+|..||+
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~-------g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~--~~~~n~~Lg~ 84 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMG-------GVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERK--RAADNKSLGQ 84 (135)
T ss_dssp -------CCCSSCCCEEETT-------TEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSS--SCSSSEEEEE
T ss_pred eCcEEEEEeecCcEEEEEEC-------CEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCc--ccccCcEEEE
Confidence 56889999999999999986 47899999999999999999997554 78888776432 3478999999
Q ss_pred EEECCCCCCCCCcceEEEEEEEcCCccEEEEEee
Q 004296 462 FTIGPFQGSNSENAKVKVTVKLNLHGIVSVESAW 495 (763)
Q Consensus 462 ~~i~~i~~~~~~~~~i~v~~~~d~~gil~v~~a~ 495 (763)
|.|.++++++.|.++|+|+|++|.||+|+|++.+
T Consensus 85 f~l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~d 118 (135)
T 1q5l_A 85 FNLDGINPAPRGMPQIEVTFDIDADGILHVSAKD 118 (135)
T ss_dssp EECCCCCSCCSSSCCEEEEEEECTTSEEEEEEEE
T ss_pred EEEeCCCCCCCceeEEEEEEEECCCCEEEEEEEE
Confidence 9999999998888999999999999999998864
No 29
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.58 E-value=4.4e-16 Score=165.75 Aligned_cols=203 Identities=11% Similarity=0.093 Sum_probs=141.7
Q ss_pred ceEEEEecCCCCH--HHHHHHHHHHHHc--------C------CceeeeecchHHHHHhhhccccCCCCCCcceEEEEEe
Q 004296 138 VDCVIGVPSYFTD--LQRREYLNAASIA--------G------LRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDI 201 (763)
Q Consensus 138 ~~~VitVP~~~~~--~qr~~l~~Aa~~A--------G------l~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~ 201 (763)
..+++++|..+.. .+|+.+++....- | +..+.++.|+.+|.+.+. ...+...++|+|+
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~------~~~~~~~v~vvDi 179 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ------ENFKNKNVAVIDF 179 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC------CCCTTCEEEEEEE
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc------hhhccCCEEEEEe
Confidence 4789999977664 3677787766521 1 234778999988886542 1135689999999
Q ss_pred CCceeEEEEEEEeCCeEEEEEEeCCCCCchHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCCCCce
Q 004296 202 GHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEA 281 (763)
Q Consensus 202 GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~ 281 (763)
||||||++++. .+.+ +....+...+||.++++.|.+++.+ .+|+..+.. ..++++|+. . ..
T Consensus 180 GggTtd~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~---~~~g~~i~~---------~~~e~i~~~-g---~~ 240 (329)
T 4apw_A 180 GGLNMGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTD---LNNGNLITN---------EQAESALNN-G---YM 240 (329)
T ss_dssp CSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSS---CSSCSCTTS---------BTTTTCSSS-C---SS
T ss_pred CCCcEEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHh---hccCCCCCH---------HHHHHHHhc-C---Cc
Confidence 99999999987 4443 3222335679999999999987754 045554443 234445442 1 01
Q ss_pred eEEeecccCCcceEEEecHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCcc
Q 004296 282 PLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRR 361 (763)
Q Consensus 282 ~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~ 361 (763)
. .+.+. ..+..+.+++.+++++++|...+++. +.+++.++.|+|+||++.+ +.+.|++.|+.++..
T Consensus 241 ~-------~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~v~v 306 (329)
T 4apw_A 241 K-------KGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYPNNSII 306 (329)
T ss_dssp C-------EECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHSTTCEEC
T ss_pred c-------cCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcCCCCEe
Confidence 0 01111 13456777888888887777777665 3556668999999999998 569999999977778
Q ss_pred CCCchhHHhcchHHhhhh
Q 004296 362 SLNASECVARGCALQCAM 379 (763)
Q Consensus 362 ~~n~~eava~Gaa~~a~~ 379 (763)
..||..|+|+|+..++..
T Consensus 307 ~~~P~~a~a~G~~~~~~~ 324 (329)
T 4apw_A 307 TNNSQWTTCEGLYKVAVA 324 (329)
T ss_dssp CSSGGGHHHHHHHHHHHH
T ss_pred cCCChhhHHHHHHHHHhh
Confidence 889999999999987754
No 30
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.41 E-value=2.9e-13 Score=148.42 Aligned_cols=222 Identities=11% Similarity=0.031 Sum_probs=141.1
Q ss_pred ceEEEEecCCCCHHHHHHHHHHH-HHcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCC
Q 004296 138 VDCVIGVPSYFTDLQRREYLNAA-SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAG 216 (763)
Q Consensus 138 ~~~VitVP~~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~ 216 (763)
..+++|.|+..+...|+.+.+.+ +..|++.+.++.+|.+|+++.+.... ......+-||+|+|+|+|+++.+. .|
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~--~~~~~~tglVVDiG~g~T~v~PV~--~G 199 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSK--VTDRSLTGTVVDSGDGVTHIIPVA--EG 199 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTT--TCSCCCCEEEEEESSSCEEEEEEE--TT
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCccc--ccCCCceEEEEECCCCceEEEEEE--CC
Confidence 46999999999999999999987 78999999999999999987774311 011135689999999999999983 33
Q ss_pred eEEEEEE-eCCCCCchHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCCCCce-----------eEE
Q 004296 217 HMKVLSH-AFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEA-----------PLN 284 (763)
Q Consensus 217 ~~~vl~~-~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~-----------~i~ 284 (763)
. ++.. ....++||+++|..|.++|..+... ... ...++.+|+.++.-... +..
T Consensus 200 ~--~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~----~~~---------~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~ 264 (427)
T 3dwl_A 200 Y--VIGSSIKTMPLAGRDVTYFVQSLLRDRNEP----DSS---------LKTAERIKEECCYVCPDIVKEFSRFDREPDR 264 (427)
T ss_dssp E--ECGGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHHHCCCCSCHHHHHHHTTC----
T ss_pred E--EehhhheeccccHHHHHHHHHHHHHHcCCC----chh---------HHHHHHHHHhcCcccCCHHHHHHHhhcCccc
Confidence 2 2221 1124799999999999888654321 000 14556666665432100 000
Q ss_pred eec--c--cCCcceEEEecHHHHH---HHHhhH------HHHHHHHHHHHHHHcCCC--CCCccEEEEecCCCChHHHHH
Q 004296 285 IEC--L--MDEKDVRGFIKREEFE---ELASGL------TEKIAIPCRKALADAGLH--VDKIHSVEIVGSGSRIPAITR 349 (763)
Q Consensus 285 i~~--l--~~~~d~~~~itr~efe---~l~~~~------~~~i~~~i~~~l~~~~~~--~~~i~~V~lvGG~srip~v~~ 349 (763)
+.. + .++....+.|..+.|. -+++|- ...|.++|.+.|.++... ..-...|+|+||+|.+|++.+
T Consensus 265 ~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~ 344 (427)
T 3dwl_A 265 YLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGN 344 (427)
T ss_dssp -CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTH
T ss_pred cceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHH
Confidence 110 1 1233345667777763 344442 235777888888765321 112357999999999999999
Q ss_pred HHHhhcC----------------------CCCccCCCchhHHhcchHHhhh
Q 004296 350 LLTSLFG----------------------REPRRSLNASECVARGCALQCA 378 (763)
Q Consensus 350 ~l~~~fg----------------------~~~~~~~n~~eava~Gaa~~a~ 378 (763)
+|.+.+. .++..+.++..++=+|++++|.
T Consensus 345 RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 345 RLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 8887651 1122334667889999999986
No 31
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.38 E-value=1.6e-12 Score=143.96 Aligned_cols=178 Identities=14% Similarity=0.112 Sum_probs=115.7
Q ss_pred eEEEEEccccceEEEEEeCCceEEEeCCCCCccceeEEEEcCC----ceEEcHhHHHhHhhCCcchHHHHHHhhCCCCCC
Q 004296 2 SVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEK----QRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGD 77 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~~~ii~n~~~~r~~ps~v~~~~~----~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~ 77 (763)
..|+||+||.++++++...+.+.+ .+||+|+.... ..+||+++.... + + .
T Consensus 24 ~~iVID~GS~~~kaG~ag~~~P~~--------v~PSvVg~~~~~~~~~~~vG~e~~~~~---r-----------~----~ 77 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYSGSDFPQS--------ILPSVYGKYTADEGNKKIFSEQSIGIP---R-----------K----D 77 (498)
T ss_dssp SCEEEECCSSEEEEEETTCSSCSE--------EEESEEEEESSCSSCCEECCTTGGGSC---C-----------T----T
T ss_pred CeEEEECCCcEEEEEECCCCCeee--------ecCceeEEeccCCCccEEEecHHHhcC---c-----------C----c
Confidence 468999999999999875553333 25999998532 357787532110 0 0 0
Q ss_pred HHHHhhhhcCCceeeeCCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCC--Ccc-eEEEEecCCCCHHHHH
Q 004296 78 PVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEM--PVV-DCVIGVPSYFTDLQRR 154 (763)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~a~~L~~l~~~a~~~~~~--~~~-~~VitVP~~~~~~qr~ 154 (763)
..-..|+ .+|.+ .. =+....+++|+.. ..++. .-. .++||.|+..+...|+
T Consensus 78 -----l~l~~Pi-----~~GvI------------~d-wd~~E~iw~~~f~---~~L~v~p~~~~pvlltep~~n~~~~Re 131 (498)
T 3qb0_A 78 -----YELKPII-----ENGLV------------ID-WDTAQEQWQWALQ---NELYLNSNSGIPALLTEPVWNSTENRK 131 (498)
T ss_dssp -----EEEEESE-----ETTEE------------SC-HHHHHHHHHHHHH---HTSCCSCCTTCCEEEEECTTCCHHHHH
T ss_pred -----eEEeccC-----cCCEE------------cc-HHHHHHHHHHHHH---hhhCCCcccCCceEEEeCCCCcHHHHH
Confidence 0001111 12321 11 1233445555443 22332 122 5999999999999999
Q ss_pred HHHHHH-HHcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCchHH
Q 004296 155 EYLNAA-SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRD 233 (763)
Q Consensus 155 ~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~ 233 (763)
.|.+.+ +..|++.+.++.+|.||++++|. .+-||+|+|+|+|+++.+. .|.. +........+||++
T Consensus 132 ~~~eilFE~f~vpav~l~~~~vlalya~G~----------~tglVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG~~ 198 (498)
T 3qb0_A 132 KSLEVLLEGMQFEACYLAPTSTCVSFAAGR----------PNCLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAGKF 198 (498)
T ss_dssp HHHHHHHTTSCCSEEEEEEHHHHHHHHHTC----------SSEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSHHH
T ss_pred HHHHHHHhhcCCCeEeecchHHHHHHHcCC----------CeEEEEEcCCCcEEEEEEe--CCEE-ccccceeccccHHH
Confidence 999975 78999999999999999987763 1249999999999999875 3322 11111135799999
Q ss_pred HHHHHHHHHHH
Q 004296 234 FDDVLFGYFAA 244 (763)
Q Consensus 234 ~D~~l~~~l~~ 244 (763)
+|..|.++|..
T Consensus 199 lt~~L~~lL~~ 209 (498)
T 3qb0_A 199 INHLIKKALEP 209 (498)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHHh
Confidence 99999999864
No 32
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.25 E-value=2.3e-11 Score=107.45 Aligned_cols=82 Identities=22% Similarity=0.406 Sum_probs=76.4
Q ss_pred hHHHHHHHhhhhHHHHHHHHHHhhh-hhccCCCHHHHHHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHhchhhHHHh
Q 004296 593 TMEQTKDKKNALESYVYEMRNKLFS-TYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENR 671 (763)
Q Consensus 593 ~~~~~~~akN~LEs~iy~~r~~l~~-~~~~~~~~~e~~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R 671 (763)
++|++.++||.||+|||.+|..|.+ .+...+++++++.|...|.++++||+.+ .+++.++|+.++++|++++.||..|
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~-~~a~~e~i~~k~~eL~~~~~~i~~k 81 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDAN-TLAEKDEFEHKRKELEQVCNPIISG 81 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999999999999999975 5889999999999999999999999986 5789999999999999999999999
Q ss_pred hhhh
Q 004296 672 YKDG 675 (763)
Q Consensus 672 ~~e~ 675 (763)
++..
T Consensus 82 ~y~~ 85 (113)
T 3lof_A 82 LYQG 85 (113)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 9864
No 33
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.21 E-value=1.6e-11 Score=132.20 Aligned_cols=197 Identities=18% Similarity=0.176 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHHc-CC--ceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCC
Q 004296 150 DLQRREYLNAASIA-GL--RPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFD 226 (763)
Q Consensus 150 ~~qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~ 226 (763)
..+-+.+.+|.+.+ || .+-. -||.||+++..... +.+..++++||||||||++++. ++.+.... .
T Consensus 367 ~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeD-----E~eLGvaiIDmGGGTTd~sVf~--~G~lv~a~---~ 434 (610)
T 2d0o_A 367 RLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTP-----GTTRPLAILDLGAGSTDASIIN--PKGDIIAT---H 434 (610)
T ss_dssp CCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTST-----TCCSSEEEEEECSSEEEEEEEC--TTCCEEEE---E
T ss_pred HHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC-----CCcCCeEEEEeCCCcceEEEEc--CCcEEEEE---E
Confidence 34567889999999 99 6666 89999998876542 5678899999999999999974 44332211 3
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCC-C---------CceeEEe--ecccCC---
Q 004296 227 SSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSA-N---------AEAPLNI--ECLMDE--- 291 (763)
Q Consensus 227 ~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~-~---------~~~~i~i--~~l~~~--- 291 (763)
...||++++..|+.-|. . ++ +..||++|. ... . ....+.+ +.+...
T Consensus 435 ip~gG~~VT~DIA~~Lg--------t--~d--------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~ 495 (610)
T 2d0o_A 435 LAGAGDMVTMIIARELG--------L--ED--------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFA 495 (610)
T ss_dssp EECSHHHHHHHHHHHHT--------C--CC--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTT
T ss_pred eccchHHHHHHHHHHhC--------C--CC--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceee
Confidence 57999999999986652 2 10 167899998 521 1 1123444 322100
Q ss_pred c------ceEEEecHHH--HHHHHhhHHHHHHHH--HHHHHHHcCC-----CCCCccEEEEecCCCChHHHHHHHHhhcC
Q 004296 292 K------DVRGFIKREE--FEELASGLTEKIAIP--CRKALADAGL-----HVDKIHSVEIVGSGSRIPAITRLLTSLFG 356 (763)
Q Consensus 292 ~------d~~~~itr~e--fe~l~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~V~lvGG~srip~v~~~l~~~fg 356 (763)
. +--..| +.. +|+ ++-+-+++.+. +..+|+..+. ...+|..|+|+||+|.++.+.++..+.|+
T Consensus 496 Rv~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~ 573 (610)
T 2d0o_A 496 RVCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALA 573 (610)
T ss_dssp CEEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTT
T ss_pred eeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhC
Confidence 0 111244 444 555 44444443332 2233555322 34578999999999999999999999997
Q ss_pred C-CC-------ccCCCchhHHhcchHHhhhh
Q 004296 357 R-EP-------RRSLNASECVARGCALQCAM 379 (763)
Q Consensus 357 ~-~~-------~~~~n~~eava~Gaa~~a~~ 379 (763)
. ++ ...-+|..|+|.|.+++.+.
T Consensus 574 ~y~VRiGrP~~~gv~gP~fAtAvGLlly~~~ 604 (610)
T 2d0o_A 574 HYRLVAGRGNIRGSEGPRNAVATGLILSWHK 604 (610)
T ss_dssp TSSCEEEECCGGGTSTTSCHHHHHHHHHHHH
T ss_pred cCCeEEecCCccccCCCcHHHHHHHHHHHhh
Confidence 6 43 22348999999999977653
No 34
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.19 E-value=3.4e-10 Score=130.75 Aligned_cols=108 Identities=22% Similarity=0.408 Sum_probs=80.6
Q ss_pred HHHHHH-HhhcCCCcce-----EEEEecCCCCHHHHHHHHHHH-HHcCCceeeeecchHHHHHhhhccccCCCCCCcceE
Q 004296 124 HLKDVA-EKNLEMPVVD-----CVIGVPSYFTDLQRREYLNAA-SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYI 196 (763)
Q Consensus 124 ~l~~~a-~~~~~~~~~~-----~VitVP~~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~v 196 (763)
.|++.+ ...++....+ +++|.|..++...|+.|.+.+ +..|++.+.++.++.+|++++|. .+-
T Consensus 179 ~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~----------~tg 248 (593)
T 4fo0_A 179 VIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGL----------SST 248 (593)
T ss_dssp HHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTC----------SEE
T ss_pred HHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCC----------Cce
Confidence 344433 3456655443 999999999999999888775 66799999999999999977763 357
Q ss_pred EEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCchHHHHHHHHHHHHH
Q 004296 197 AFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAA 244 (763)
Q Consensus 197 lv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~ 244 (763)
+|||+|++.|.|+-|. +|.. +....-..++||++++..|.++|..
T Consensus 249 lVVDiG~~~T~v~PV~--dG~~-l~~~~~rl~~GG~~lt~~L~~lL~~ 293 (593)
T 4fo0_A 249 CIVDVGDQKTSVCCVE--DGVS-HRNTRLCLAYGGSDVSRCFYWLMQR 293 (593)
T ss_dssp EEEEECSSCEEEEEEE--SSCB-CGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCceeeeeeE--CCEE-ehhheEEecccHHHHHHHHHHHHHh
Confidence 9999999999988774 3321 1111123469999999999988865
No 35
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.15 E-value=2.8e-11 Score=130.92 Aligned_cols=193 Identities=18% Similarity=0.127 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHc-CC--ceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCC
Q 004296 152 QRREYLNAASIA-GL--RPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSS 228 (763)
Q Consensus 152 qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~ 228 (763)
+-+.+.+|.+.+ || .+-. -||.||+++..... +.+..++++||||||||++++. +|.+... ....
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTed-----E~elGvaiIDmGgGTTd~sVf~--~g~lv~a---~~ip 438 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAGALTTP-----GCAAPLAILDLGAGSTDAAIVN--AEGQITA---VHLA 438 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTST-----TCCSSEEEEEECSSEEEEEEEC--SSSCEEE---EEEE
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC-----CCcCCeEEEEeCCCcceEEEEc--CCcEEEE---EEec
Confidence 346688899999 99 6655 89999998876542 5678899999999999999975 3333221 1357
Q ss_pred CchHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCC-C---------CceeEEe--ecccCC---c-
Q 004296 229 LGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSA-N---------AEAPLNI--ECLMDE---K- 292 (763)
Q Consensus 229 lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~-~---------~~~~i~i--~~l~~~---~- 292 (763)
.||++++..|+.-|. . ++ +..||++|. ... . ....+.+ +.+... .
T Consensus 439 ~gG~~VT~DIA~~Lg--------~--~d--------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~ 499 (607)
T 1nbw_A 439 GAGNMVSLLIKTELG--------L--ED--------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKV 499 (607)
T ss_dssp CCHHHHHHHHHHHHT--------C--SC--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCE
T ss_pred cchHHHHHHHHHHhC--------C--CC--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeee
Confidence 999999999986652 2 10 167899998 521 1 1123444 222110 0
Q ss_pred -----ceEEEecHHH--HHHHHhhHHHHHHHH--HHHHHHHcCCC-----CCCccEEEEecCCCChHHHHHHHHhhcCC-
Q 004296 293 -----DVRGFIKREE--FEELASGLTEKIAIP--CRKALADAGLH-----VDKIHSVEIVGSGSRIPAITRLLTSLFGR- 357 (763)
Q Consensus 293 -----d~~~~itr~e--fe~l~~~~~~~i~~~--i~~~l~~~~~~-----~~~i~~V~lvGG~srip~v~~~l~~~fg~- 357 (763)
+.-..| +.. +|+ ++-+-+++.+. +..+|+..+.. ..+|..|+|+||+|.++.+.++..+.|+.
T Consensus 500 ~~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~ 577 (607)
T 1nbw_A 500 VYIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHY 577 (607)
T ss_dssp EEEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTT
T ss_pred ecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcC
Confidence 111234 444 555 44444443332 34457776542 45679999999999999999999999975
Q ss_pred CC-------ccCCCchhHHhcchHHhh
Q 004296 358 EP-------RRSLNASECVARGCALQC 377 (763)
Q Consensus 358 ~~-------~~~~n~~eava~Gaa~~a 377 (763)
++ ...-+|..|+|.|.+++.
T Consensus 578 ~VRiGrP~~~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 578 GVVAGQGNIRGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp TCEEEECCGGGTSCSCCHHHHHHHHHH
T ss_pred CeEEecCCccccCCchHHHHHHHHHhh
Confidence 43 223489999999998764
No 36
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=98.98 E-value=4.2e-10 Score=100.34 Aligned_cols=80 Identities=18% Similarity=0.368 Sum_probs=72.3
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhh-hhccCCCHHHHHHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHhchhhHHHhh
Q 004296 594 MEQTKDKKNALESYVYEMRNKLFS-TYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRY 672 (763)
Q Consensus 594 ~~~~~~akN~LEs~iy~~r~~l~~-~~~~~~~~~e~~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~ 672 (763)
+|++.++||.||+|||.+|..|.+ .+...++++++++|...|.++++||+++ .++++++|+.++++|++++.||..|+
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~-~~ad~e~ik~k~~eL~~~~~~i~~k~ 91 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSN-QTAEKEEFEHQQKDLEGLANPIISKL 91 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999975 4788999999999999999999999854 56889999999999999999999988
Q ss_pred hh
Q 004296 673 KD 674 (763)
Q Consensus 673 ~e 674 (763)
+.
T Consensus 92 y~ 93 (120)
T 2p32_A 92 YQ 93 (120)
T ss_dssp CC
T ss_pred HH
Confidence 74
No 37
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=98.90 E-value=6.9e-10 Score=98.09 Aligned_cols=77 Identities=18% Similarity=0.397 Sum_probs=68.3
Q ss_pred HHHHhhhhHHHHHHHHHHhhh-hhccCCCHHHHHHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHhchhhHHHhhhh
Q 004296 597 TKDKKNALESYVYEMRNKLFS-TYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKD 674 (763)
Q Consensus 597 ~~~akN~LEs~iy~~r~~l~~-~~~~~~~~~e~~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e 674 (763)
+.++||.||+|||.+|..|.+ ++...+++++|++|...|.++++||.++ .++++++|++++++|++++.||..|+++
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~-~~ad~~~i~~~~~~L~~~~~~i~~~~~~ 79 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKN-QTAEKEEFEHQQKELEKVCNPIITKLYQ 79 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568999999999999999974 6888999999999999999999999743 4568899999999999999999998875
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.75 E-value=7e-07 Score=91.71 Aligned_cols=48 Identities=23% Similarity=0.106 Sum_probs=43.8
Q ss_pred cEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhhhhh
Q 004296 333 HSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAML 380 (763)
Q Consensus 333 ~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a~~~ 380 (763)
+.|+++||.++.|.+++.+.+.+|.++..+.+++.+.|+|||++|...
T Consensus 210 ~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 210 KDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp SSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred CeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 679999999999999999999999988888788889999999998753
No 39
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.86 E-value=3.6e-05 Score=86.08 Aligned_cols=121 Identities=21% Similarity=0.389 Sum_probs=88.5
Q ss_pred ceEEEEecCCCCHHHHHHHHHHH-HHcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCC
Q 004296 138 VDCVIGVPSYFTDLQRREYLNAA-SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAG 216 (763)
Q Consensus 138 ~~~VitVP~~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~ 216 (763)
..++||.|+.++...|+.|.+.+ +..|++.+.++.++.||++++|. ..+-+|||+|+|+|+++.+. .|
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl---------~ttGLVVDiG~g~T~VvPV~--eG 290 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI---------STSTCVVNIGAAETRIACVD--EG 290 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC---------SSCEEEEEECSSCEEEEEEE--TT
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC---------CCceEEEcCCCceEEEEEEe--CC
Confidence 46999999999999999999887 56899999999999999977653 24679999999999999874 34
Q ss_pred eEEEEEEe-CCCCCchHHHHHHHHHHHHHHHHhhhc---ccccccHHHHHHHHHHHHHHhhhcCCCC
Q 004296 217 HMKVLSHA-FDSSLGGRDFDDVLFGYFAAKFKEQYK---INVYSNVRACIRLRAACEKLKKVLSANA 279 (763)
Q Consensus 217 ~~~vl~~~-~~~~lGG~~~D~~l~~~l~~~~~~~~~---~~~~~~~~~~~rL~~~ae~~K~~Ls~~~ 279 (763)
. ++..+ ....+||+++|..|.++|..+ .|. .++. ... =+..++.+|+.++.-.
T Consensus 291 ~--vl~~ai~rL~iGG~dLT~yL~kLL~~r---gypy~~~~f~--t~~---e~eiVrdIKEk~CyVs 347 (655)
T 4am6_A 291 T--VLEHSAITLDYGGDDITRLFALFLLQS---DFPLQDWKID--SKH---GWLLAERLKKNFTTFQ 347 (655)
T ss_dssp E--ECGGGCEEESCCHHHHHHHHHHHHHHT---TCSCCSCCTT--SHH---HHHHHHHHHHHHCCCC
T ss_pred E--EEhhheeeecchHHHHHHHHHHHHHHc---CCCccccCCC--Ccc---hHHHHHHHHHheEEEc
Confidence 2 22111 135799999999999998753 110 1111 111 1256778888887653
No 40
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.29 E-value=0.003 Score=64.53 Aligned_cols=75 Identities=11% Similarity=0.043 Sum_probs=52.4
Q ss_pred ecHHHHHH-HHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecC-CCChHHHHHHHHhhc---CCCCccCCCchhHHhcc
Q 004296 298 IKREEFEE-LASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGS-GSRIPAITRLLTSLF---GREPRRSLNASECVARG 372 (763)
Q Consensus 298 itr~efe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG-~srip~v~~~l~~~f---g~~~~~~~n~~eava~G 372 (763)
.+++++-. ++.-+.+++..+.....+..+ ++.|+++|| .+..|.+++.+.+++ +.++..+.+|..+.|+|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 35554432 233334444444443333433 456999999 899999999999985 57788888999999999
Q ss_pred hHHhh
Q 004296 373 CALQC 377 (763)
Q Consensus 373 aa~~a 377 (763)
||+.+
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99875
No 41
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=97.13 E-value=0.063 Score=56.29 Aligned_cols=64 Identities=11% Similarity=0.001 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhc---CCCCccCC---CchhHHhcchHHhhhh
Q 004296 311 TEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLF---GREPRRSL---NASECVARGCALQCAM 379 (763)
Q Consensus 311 ~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~f---g~~~~~~~---n~~eava~Gaa~~a~~ 379 (763)
.+.+...+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.++..+. -.|.++++|+|.+...
T Consensus 229 ~~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~ 298 (330)
T 2ivn_A 229 FAALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMY 298 (330)
T ss_dssp HHHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHH
Confidence 3444445555555444 567999999999999999999877 55444443 3467889998876543
No 42
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=96.69 E-value=0.0098 Score=62.42 Aligned_cols=69 Identities=19% Similarity=0.071 Sum_probs=49.4
Q ss_pred HHHHhhHHHHHHHHHHHH----HHHcCCCCCCccEEEEecC-CCChHHHHHHHHhhcC------CCCccCCCchhHHhcc
Q 004296 304 EELASGLTEKIAIPCRKA----LADAGLHVDKIHSVEIVGS-GSRIPAITRLLTSLFG------REPRRSLNASECVARG 372 (763)
Q Consensus 304 e~l~~~~~~~i~~~i~~~----l~~~~~~~~~i~~V~lvGG-~srip~v~~~l~~~fg------~~~~~~~n~~eava~G 372 (763)
|+++..++.-+..-|-.. .+..+ ++.|+++|| .+..|.+++.|++.++ .++..+.++..+.|+|
T Consensus 279 eDIa~gll~sVa~~I~~lA~l~A~~~~-----i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlG 353 (360)
T 2i7n_A 279 EDLARATLVTITNNIGSIARMCALNEN-----IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVG 353 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHH
Confidence 344444444444443333 23444 345999999 9999999999999863 5677788999999999
Q ss_pred hHHhh
Q 004296 373 CALQC 377 (763)
Q Consensus 373 aa~~a 377 (763)
||+.+
T Consensus 354 AaL~~ 358 (360)
T 2i7n_A 354 ALLEL 358 (360)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99875
No 43
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=96.66 E-value=0.0067 Score=52.80 Aligned_cols=73 Identities=15% Similarity=0.428 Sum_probs=59.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcC------CCcchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCceeHHHHHHHHHH
Q 004296 674 DGEARAQATRDLLQCIVEYRTAVGS------LPPEEQDFIISECYKAEQWLREIAQQQDSLPKNTDPILWSGDIKRRTED 747 (763)
Q Consensus 674 e~~~rp~a~~~l~~~l~~~~~~~~~------i~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~ 747 (763)
++..|-++.+.|.+.+..++..+.. |+++++..|.+.|+++..||+. ++.....+|+.|+++
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~------------~~~a~~e~i~~k~~e 70 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDA------------NTLAEKDEFEHKRKE 70 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHH------------CTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHc------------CCcCCHHHHHHHHHH
Confidence 4456667777888888877776633 9999999999999999999986 222357899999999
Q ss_pred HHHHHHhhhcC
Q 004296 748 LKLKCQHLLKG 758 (763)
Q Consensus 748 l~~~~~~l~~~ 758 (763)
|+..|.+|+.+
T Consensus 71 L~~~~~~i~~k 81 (113)
T 3lof_A 71 LEQVCNPIISG 81 (113)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999853
No 44
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=96.54 E-value=0.022 Score=64.70 Aligned_cols=79 Identities=15% Similarity=0.183 Sum_probs=56.0
Q ss_pred cHHHHHHHHhh-HHHHHHHHHHHHHHHcCCCCCCccEEEEecCCC-ChHHHHHHHHhhcCCCCccCCCchhHHhcchHHh
Q 004296 299 KREEFEELASG-LTEKIAIPCRKALADAGLHVDKIHSVEIVGSGS-RIPAITRLLTSLFGREPRRSLNASECVARGCALQ 376 (763)
Q Consensus 299 tr~efe~l~~~-~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s-rip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~ 376 (763)
+|.+|-+.+-+ +.-.+...+ +.|+..|. .++.|.++||++ +.+.+.+++.+.||.++... .+.|+.|+|||+.
T Consensus 410 t~~~l~RAvlEgia~~~r~~~-~~l~~~g~---~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~l 484 (572)
T 3jvp_A 410 KPEEIYRALLEATAFGTRAIV-DAFHGRGV---EVHELYACGGLPQKNHLLMQIFADVTNREIKVA-ASKQTPALGAAMF 484 (572)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-HHHHTTTC---CEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEB-CCSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CcCEEEEEcCchhhCHHHHHHHHHHHCCeeEec-CCCccHHHHHHHH
Confidence 56665443322 222233333 33444443 578999999999 99999999999999988654 4678999999999
Q ss_pred hhhhCC
Q 004296 377 CAMLSP 382 (763)
Q Consensus 377 a~~~s~ 382 (763)
|+.-.+
T Consensus 485 A~~a~G 490 (572)
T 3jvp_A 485 ASVAAG 490 (572)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 987554
No 45
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.38 E-value=0.023 Score=59.06 Aligned_cols=78 Identities=9% Similarity=0.047 Sum_probs=50.2
Q ss_pred HHHHHHHHHHcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCchH
Q 004296 153 RREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGR 232 (763)
Q Consensus 153 r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~ 232 (763)
...+..+-+..|+++--|-.|.+|.....+... .++ .....+|+|+|||||.++++. ++.+ .. ..+.++|+.
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~-~l~--~~~~~lvvDIGGGStEl~~~~--~~~~--~~-~~Sl~~G~v 171 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAYLAVAY-SLK--PEGEVCVVDQGGGSTEYVFGK--GYKV--RE-VISLPIGIV 171 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHH-HTC--CCSEEEEEEEETTEEEEEEEE--TTEE--EE-EEEECCCHH
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHh-hcc--cCCCEEEEEeCCCcEEEEEEe--CCce--ee-EEEEeccHH
Confidence 344445555789987555556666544444432 222 245799999999999999865 4443 22 224789999
Q ss_pred HHHHHH
Q 004296 233 DFDDVL 238 (763)
Q Consensus 233 ~~D~~l 238 (763)
.+.+.+
T Consensus 172 ~l~e~~ 177 (315)
T 1t6c_A 172 NLTETF 177 (315)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988775
No 46
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=96.24 E-value=0.14 Score=53.71 Aligned_cols=67 Identities=12% Similarity=0.030 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhc---CCCCccCC---CchhHHhcchHHhhhhhC
Q 004296 310 LTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLF---GREPRRSL---NASECVARGCALQCAMLS 381 (763)
Q Consensus 310 ~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~f---g~~~~~~~---n~~eava~Gaa~~a~~~s 381 (763)
+.+.+...+.++++..+ ++.|+|+||.+....+++.|.+.+ |.++..+. -.|.++++|+|.+.....
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~ 305 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKS 305 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHc
Confidence 44455556666666665 467999999999999999999887 54443332 358899999987655443
No 47
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.20 E-value=0.31 Score=50.74 Aligned_cols=45 Identities=20% Similarity=0.302 Sum_probs=31.1
Q ss_pred cCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEE
Q 004296 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVS 212 (763)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~ 212 (763)
.|++ +.+.|+..|+|++....... ....+++++-+|.| +-..++.
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~---~~~~~~~~l~~GtG-iG~gii~ 140 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAG---QGHDDVICITLGTG-LGGGIII 140 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT---TTCSSEEEEEESSS-EEEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCC---CCCCCEEEEEeCcc-eEEEEEE
Confidence 3776 68999999999875443221 23467888889988 5556553
No 48
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.19 E-value=0.51 Score=48.42 Aligned_cols=48 Identities=13% Similarity=0.083 Sum_probs=35.9
Q ss_pred CccEEEEecCCCChHHHHHHHHhhcC-CCCccCCCchhHHhcchHHhhhh
Q 004296 331 KIHSVEIVGSGSRIPAITRLLTSLFG-REPRRSLNASECVARGCALQCAM 379 (763)
Q Consensus 331 ~i~~V~lvGG~srip~v~~~l~~~fg-~~~~~~~n~~eava~Gaa~~a~~ 379 (763)
+.+.|+|.||.+..+.+.+.+++.+. .++.... .+.+.++||++++..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 45779999998776888888887774 3555555 667899999988753
No 49
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=96.14 E-value=1.5 Score=45.75 Aligned_cols=61 Identities=7% Similarity=-0.041 Sum_probs=41.2
Q ss_pred CcceEEEEecCCCCHHHHHHHHHHHHHc-C--CceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCcee
Q 004296 136 PVVDCVIGVPSYFTDLQRREYLNAASIA-G--LRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDT 206 (763)
Q Consensus 136 ~~~~~VitVP~~~~~~qr~~l~~Aa~~A-G--l~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~ 206 (763)
.+..+.|++|...+......+.+..+.. | .-.+.+.|+..|+|+++ . . ..++++=+|.|.-
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~-~--------~~~v~v~~GTGig 133 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T-P--------DGGVVLISGTGSN 133 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C-S--------SCEEEEEESSSEE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C-C--------CCcEEEEEcCCce
Confidence 5778999999998876655666665543 4 13468999999999873 2 1 2345555676643
No 50
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.14 E-value=0.0058 Score=69.20 Aligned_cols=84 Identities=17% Similarity=0.226 Sum_probs=61.3
Q ss_pred EecHHHHHHHHhhHHHHHHHHHHHHH---HHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcch
Q 004296 297 FIKREEFEELASGLTEKIAIPCRKAL---ADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGC 373 (763)
Q Consensus 297 ~itr~efe~l~~~~~~~i~~~i~~~l---~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Ga 373 (763)
.-+|.++-+++.-+++-+.--++..+ ++.|. .++.|.++||+++.|.+.+++.+.||.++... ...|+.|+||
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~---~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~-~~~e~~alGA 483 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGY---NIDTMMASGGGTKNPIFVQEHANATGCAMLLP-EESEAMLLGS 483 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC---CCCEEEEESGGGGCHHHHHHHHHHHCCEEEEE-SCSCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEeCccccCHHHHHHHHHhhCCeEEec-CCCcchHHHH
Confidence 45788885434444444444433333 33443 57899999999999999999999999988664 4578999999
Q ss_pred HHhhhhhCCCc
Q 004296 374 ALQCAMLSPAF 384 (763)
Q Consensus 374 a~~a~~~s~~~ 384 (763)
|++|+.-.+.+
T Consensus 484 A~lA~~a~G~~ 494 (554)
T 3l0q_A 484 AMMGTVAAGVF 494 (554)
T ss_dssp HHHHHHHTTSS
T ss_pred HHHHHHHcCCc
Confidence 99998766543
No 51
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=96.06 E-value=0.53 Score=48.43 Aligned_cols=44 Identities=18% Similarity=0.216 Sum_probs=29.6
Q ss_pred cCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEE
Q 004296 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (763)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 211 (763)
.|++ +.+.|+..|+|++-...... ....+++++-+|.| +-.+++
T Consensus 98 ~~~p-v~v~NDa~aaal~E~~~g~~---~~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 98 TGRP-VFLENDANAAALAEHHLGAA---QGEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTT---TTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEechHHHHHHHHHhCCC---CCCCCEEEEEECCc-eeEEEE
Confidence 4776 57999999999876543221 23457888888877 445554
No 52
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.94 E-value=0.0092 Score=66.80 Aligned_cols=79 Identities=27% Similarity=0.337 Sum_probs=56.2
Q ss_pred cHHHHHHHHh-hHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhh
Q 004296 299 KREEFEELAS-GLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQC 377 (763)
Q Consensus 299 tr~efe~l~~-~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a 377 (763)
+|.++-+.+- .+.-.+...++ .|++.|. .++.|.++||+++.|.+.+++.+.||.++... .+.|+.|+|||++|
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l~-~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA 469 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCLE-LIRSLGA---SITRILLIGGGAKSEAIRTLAPSILGMDVTRP-ATDEYVAIGAARQA 469 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-HHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-CCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhCCceEec-CCcccHHHHHHHHH
Confidence 5666544332 33333333333 4445554 47889999999999999999999999988654 46678999999999
Q ss_pred hhhCC
Q 004296 378 AMLSP 382 (763)
Q Consensus 378 ~~~s~ 382 (763)
+.-.+
T Consensus 470 ~~a~G 474 (515)
T 3i8b_A 470 AWVLS 474 (515)
T ss_dssp HHHHH
T ss_pred HHHcC
Confidence 86543
No 53
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=95.94 E-value=0.53 Score=49.04 Aligned_cols=44 Identities=11% Similarity=0.093 Sum_probs=30.5
Q ss_pred cCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEE
Q 004296 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (763)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 211 (763)
.|++ +.+.|+..|+|++-...... ....+++++-+|.| +-.+++
T Consensus 120 ~~~p-V~v~NDa~aaalgE~~~g~~---~~~~~~~~l~~GtG-iG~gii 163 (327)
T 4db3_A 120 IGRS-VKIENDANCFALSEAWDEEL---QDAPSVMGLILGTG-FGGGLI 163 (327)
T ss_dssp HSSC-CEEEEHHHHHHHHHHTSTTT---TTCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecchhHHHHHHHHhCCC---CCCCcEEEEEeCcc-ceEEEE
Confidence 4786 68999999999876543321 23567888888887 555554
No 54
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=95.85 E-value=0.0091 Score=67.32 Aligned_cols=76 Identities=16% Similarity=0.109 Sum_probs=57.1
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhhhhhC
Q 004296 305 ELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLS 381 (763)
Q Consensus 305 ~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a~~~s 381 (763)
.++.-+++.+.--+...++..+.....++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|+.-.
T Consensus 408 ~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~ 483 (538)
T 4bc3_A 408 VEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVGSAYRAFHGL 483 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEEC-CCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEec-CCCCchHHHHHHHHHHHh
Confidence 3444455555555555555544444467889999999999999999999999988654 567899999999998644
No 55
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.82 E-value=0.01 Score=66.43 Aligned_cols=80 Identities=20% Similarity=0.177 Sum_probs=57.3
Q ss_pred cHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCC-ccCCCchhHHhcchHHhh
Q 004296 299 KREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREP-RRSLNASECVARGCALQC 377 (763)
Q Consensus 299 tr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~-~~~~n~~eava~Gaa~~a 377 (763)
+|.+|-+ -+++.+.-.+...++...- .. ++.|.++||+++.+.+.+.+.+.||.++ .. ..+.|+.|+|||+.|
T Consensus 375 ~~~~l~R---AvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~~e~~alGaA~lA 448 (511)
T 3hz6_A 375 TRAQILL---AVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNLNVSLLVK-PDAHLHPLRGLAALA 448 (511)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHHTCEEEEC-CCGGGHHHHHHHHHH
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEe-cCCCCchHHHHHHHH
Confidence 5665543 3444443333333333222 23 7899999999999999999999999988 54 468999999999999
Q ss_pred hhhCCCc
Q 004296 378 AMLSPAF 384 (763)
Q Consensus 378 ~~~s~~~ 384 (763)
+.-.+.+
T Consensus 449 ~~a~G~~ 455 (511)
T 3hz6_A 449 AVELEWS 455 (511)
T ss_dssp HHHTTSC
T ss_pred HHHhCCc
Confidence 8766543
No 56
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.73 E-value=0.0085 Score=66.71 Aligned_cols=53 Identities=21% Similarity=0.273 Sum_probs=44.8
Q ss_pred CccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhhhhhCCC
Q 004296 331 KIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPA 383 (763)
Q Consensus 331 ~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a~~~s~~ 383 (763)
.++.|.++||+++.+.+.+.+.+.+|.++......+.+.|+|||+.|+.-.+.
T Consensus 386 ~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA~~~~g~ 438 (484)
T 2itm_A 386 KPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANP 438 (484)
T ss_dssp CCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHHHHHHCT
T ss_pred CcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHHHHHcCC
Confidence 46789999999999999999999999998776555546899999999865543
No 57
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.71 E-value=0.012 Score=65.73 Aligned_cols=53 Identities=8% Similarity=-0.006 Sum_probs=46.0
Q ss_pred CccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhhhhhCCCc
Q 004296 331 KIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAF 384 (763)
Q Consensus 331 ~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a~~~s~~~ 384 (763)
.++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|+.-.+.+
T Consensus 393 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G~~ 445 (504)
T 3ll3_A 393 KPVAINATGGFLKSDFVRQLCANIFNVPIVTM-KEQQSGTLAAMFLARQALGLN 445 (504)
T ss_dssp CCSEEEEESGGGCSHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEeCchhcCHHHHHHHHHhhCCeEEec-CCCCchhHHHHHHHHHHcCcc
Confidence 57899999999999999999999999998664 467799999999998766543
No 58
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.67 E-value=0.011 Score=66.33 Aligned_cols=83 Identities=13% Similarity=0.235 Sum_probs=59.4
Q ss_pred ecHHHHHHHHh-hHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHh
Q 004296 298 IKREEFEELAS-GLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQ 376 (763)
Q Consensus 298 itr~efe~l~~-~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~ 376 (763)
-+|.++-+.+- .+.-.+...++..-+..|.. ++.|.++||+++.+.+.+++.+.||.++.+. ...|+.|+|||+.
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~~---~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~-~~~E~~alGAA~l 446 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGIR---LHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYL 446 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CCEEEEECchhhCHHHHHHHHHHHCCEEEeC-CCCchHHHHHHHH
Confidence 45666544332 23333344444433445654 7889999999999999999999999988655 4568999999999
Q ss_pred hhhhCCCc
Q 004296 377 CAMLSPAF 384 (763)
Q Consensus 377 a~~~s~~~ 384 (763)
|+.-.+.+
T Consensus 447 A~~a~G~~ 454 (526)
T 3ezw_A 447 AGLAVGFW 454 (526)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCCC
Confidence 99876654
No 59
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.66 E-value=0.013 Score=65.31 Aligned_cols=80 Identities=19% Similarity=0.240 Sum_probs=57.0
Q ss_pred cHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhhh
Q 004296 299 KREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCA 378 (763)
Q Consensus 299 tr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a~ 378 (763)
+|.++- .-+++.+.-.+...++...-.. .++.|.++||+++.+.+.+.+.+.||.++... ...|+.|+|||+.|+
T Consensus 365 ~~~~l~---rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA~ 439 (497)
T 2zf5_O 365 GREHLA---RATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNRKVIRP-VVKETTALGAAYLAG 439 (497)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCCeEEEc-CCCcchHHHHHHHHH
Confidence 455543 3344444444444444432222 57889999999999999999999999988655 445699999999998
Q ss_pred hhCCC
Q 004296 379 MLSPA 383 (763)
Q Consensus 379 ~~s~~ 383 (763)
.-.+.
T Consensus 440 ~~~g~ 444 (497)
T 2zf5_O 440 LAVDY 444 (497)
T ss_dssp HHTTS
T ss_pred HHhCc
Confidence 76553
No 60
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.63 E-value=0.016 Score=64.90 Aligned_cols=81 Identities=14% Similarity=0.049 Sum_probs=57.5
Q ss_pred cHHHHHHHHh-hHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhh
Q 004296 299 KREEFEELAS-GLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQC 377 (763)
Q Consensus 299 tr~efe~l~~-~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a 377 (763)
+|.+|-+.+- .+.-.+...++ .|+..|. .++.|.++||+++.+.+.+++.+.||.++.... ..|+.|+|||+.|
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~~-~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~-~~e~~alGaA~lA 445 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHVA-VLDDIGH---APQRFFASDGGTRSRVWMGIMADVLQRPVQLLA-NPLGSAVGAAWVA 445 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEE-CCSTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHhCCeEEecC-CCCchHHHHHHHH
Confidence 5666544333 23333333333 4445554 478899999999999999999999999986654 3568899999999
Q ss_pred hhhCCCc
Q 004296 378 AMLSPAF 384 (763)
Q Consensus 378 ~~~s~~~ 384 (763)
+.-.+.+
T Consensus 446 ~~a~G~~ 452 (508)
T 3ifr_A 446 AIGGGDD 452 (508)
T ss_dssp HHHTCSS
T ss_pred HHHhCCC
Confidence 8766543
No 61
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.47 E-value=0.018 Score=64.29 Aligned_cols=82 Identities=16% Similarity=0.246 Sum_probs=58.0
Q ss_pred cHHHHHHHH-hhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhh
Q 004296 299 KREEFEELA-SGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQC 377 (763)
Q Consensus 299 tr~efe~l~-~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a 377 (763)
+|.+|-+.+ +.+.-.+...++..-+..|. .++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||++|
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~la 449 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIVNTSVERP-EIQETTALGAAFLA 449 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHhCCceEec-CCCcchHHHHHHHH
Confidence 566655433 23333334444333223454 47889999999999999999999999988554 56789999999999
Q ss_pred hhhCCCc
Q 004296 378 AMLSPAF 384 (763)
Q Consensus 378 ~~~s~~~ 384 (763)
+.-.+.+
T Consensus 450 ~~a~G~~ 456 (501)
T 3g25_A 450 GLAVGFW 456 (501)
T ss_dssp HHHTTSS
T ss_pred HHHhCcc
Confidence 8766654
No 62
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=95.47 E-value=0.02 Score=64.06 Aligned_cols=83 Identities=13% Similarity=0.223 Sum_probs=58.6
Q ss_pred ecHHHHHHHH-hhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHh
Q 004296 298 IKREEFEELA-SGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQ 376 (763)
Q Consensus 298 itr~efe~l~-~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~ 376 (763)
-+|.+|-+.+ +.+.-.+...++..-+..|. .++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.
T Consensus 372 ~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~l 447 (506)
T 3h3n_X 372 TTKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADILDIDVQRA-ANLETTALGAAYL 447 (506)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHhCCeEEec-CCCcchhHHHHHH
Confidence 3566655433 23333334444333222454 46889999999999999999999999988654 5778999999999
Q ss_pred hhhhCCCc
Q 004296 377 CAMLSPAF 384 (763)
Q Consensus 377 a~~~s~~~ 384 (763)
|+.-.+.+
T Consensus 448 A~~a~G~~ 455 (506)
T 3h3n_X 448 AGLAVGFW 455 (506)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCcc
Confidence 98766544
No 63
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=95.45 E-value=0.076 Score=55.44 Aligned_cols=45 Identities=11% Similarity=0.240 Sum_probs=30.6
Q ss_pred Hc-CCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEE
Q 004296 162 IA-GLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (763)
Q Consensus 162 ~A-Gl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 211 (763)
.. |++ +.+.|+..|+|++-...... ....+++++-+|.| .-.+++
T Consensus 116 ~~~~~p-V~v~NDa~aaalaE~~~g~~---~~~~~~v~l~~GtG-iG~gii 161 (321)
T 3r8e_A 116 EFPHIH-FKIENDAKCAALGEYYFGEN---KRMQTFILLALGTG-VGSGVM 161 (321)
T ss_dssp HCTTSE-EEEEEHHHHHHHHHHHHSTT---TTCSSEEEEEESSS-EEEEEE
T ss_pred HcCCCC-EEEEchHHHHHHHHHHhCCC---CCCCcEEEEEECCc-eEEEEE
Confidence 45 776 57999999999875443221 23467888889988 555554
No 64
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=95.24 E-value=1.5 Score=44.69 Aligned_cols=42 Identities=19% Similarity=0.153 Sum_probs=28.8
Q ss_pred cCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEE
Q 004296 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (763)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 211 (763)
.|++ +.+.|+..|+|++... .. ....+++++-+|.| +-.+++
T Consensus 94 ~~~p-v~v~NDa~aaa~~e~~-~~----~~~~~~v~l~~GtG-iG~giv 135 (292)
T 2gup_A 94 YQLP-VHLENDANCVGLSELL-AH----PELENAACVVIGTG-IGGAMI 135 (292)
T ss_dssp GCCC-EEEEEHHHHHHHHHHH-HC----TTCSSEEEEEESSS-EEEEEE
T ss_pred cCCC-EEEechHHHHHHHHHH-hc----CCCCeEEEEEECCc-eEEEEE
Confidence 4776 6899999999987544 11 23457888888887 445554
No 65
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=95.24 E-value=0.45 Score=48.83 Aligned_cols=49 Identities=10% Similarity=0.028 Sum_probs=34.3
Q ss_pred CccEEEEecCCCChHHHHHHHHhhcCC------CCccCCCchhHHhcchHHhhhh
Q 004296 331 KIHSVEIVGSGSRIPAITRLLTSLFGR------EPRRSLNASECVARGCALQCAM 379 (763)
Q Consensus 331 ~i~~V~lvGG~srip~v~~~l~~~fg~------~~~~~~n~~eava~Gaa~~a~~ 379 (763)
+++.|+|-||.+..|.+.+.|++.+.. ++....-.+.+.++|||.++..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 457899999988877677777766631 2233345677999999987753
No 66
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.14 E-value=0.02 Score=64.12 Aligned_cols=53 Identities=15% Similarity=0.075 Sum_probs=44.5
Q ss_pred CccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhhhhhCCCc
Q 004296 331 KIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAF 384 (763)
Q Consensus 331 ~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a~~~s~~~ 384 (763)
.++.|.++||+++.|.+.+++.+.||.++... .+.|+.|+|||++|+.-.+.+
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA~~a~G~~ 477 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRP-VILETTALGVAWLAGSRAGVW 477 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCCCHHHHHHHHHHHHHHTSS
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCCeEEec-CCCccHHHHHHHHHHHHcCCc
Confidence 47789999999999999999999999988654 567799999999998765543
No 67
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.13 E-value=0.024 Score=63.47 Aligned_cols=81 Identities=14% Similarity=0.232 Sum_probs=56.9
Q ss_pred cHHHHHHHH-hhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhh
Q 004296 299 KREEFEELA-SGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQC 377 (763)
Q Consensus 299 tr~efe~l~-~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a 377 (763)
+|.++-+.+ +.+.-.+...++.+-+..|. .++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 371 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA 446 (510)
T 2p3r_A 371 NANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYLA 446 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccEEEEeCchhcCHHHHHHHHHHhCCceEec-CCCCcHHHHHHHHH
Confidence 566654433 23333334444333223354 46889999999999999999999999988654 46779999999999
Q ss_pred hhhCCC
Q 004296 378 AMLSPA 383 (763)
Q Consensus 378 ~~~s~~ 383 (763)
+.-.+.
T Consensus 447 ~~a~G~ 452 (510)
T 2p3r_A 447 GLAVGF 452 (510)
T ss_dssp HHHHTS
T ss_pred HHHhCc
Confidence 876554
No 68
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=94.89 E-value=0.028 Score=62.77 Aligned_cols=81 Identities=14% Similarity=0.158 Sum_probs=58.0
Q ss_pred cHHHHHHH-HhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhh
Q 004296 299 KREEFEEL-ASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQC 377 (763)
Q Consensus 299 tr~efe~l-~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a 377 (763)
+|.++-+. ++.+.-.+...++.+-+..|. .++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||++|
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA 448 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQLGVDVVRP-KVAETTALGAAYAA 448 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHhCCeEEeC-CCCcchHHHHHHHH
Confidence 56665543 333444444444443333454 36789999999999999999999999988654 55679999999999
Q ss_pred hhhCCC
Q 004296 378 AMLSPA 383 (763)
Q Consensus 378 ~~~s~~ 383 (763)
+.-.+.
T Consensus 449 ~~~~G~ 454 (504)
T 2d4w_A 449 GIAVGF 454 (504)
T ss_dssp HHHHTS
T ss_pred HhhcCc
Confidence 876553
No 69
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=94.85 E-value=1.2 Score=46.01 Aligned_cols=44 Identities=23% Similarity=0.342 Sum_probs=29.9
Q ss_pred cCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEE
Q 004296 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (763)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 211 (763)
.|++ +.+.|+..|+|++....... ....+++++-+|.| +-..++
T Consensus 108 ~~~p-v~v~ND~~aaa~~e~~~g~~---~~~~~~~~l~~GtG-iG~giv 151 (326)
T 2qm1_A 108 LGIP-FALDNDANVAALGERWKGAG---ENNPDVIFITLGTG-VGGGIV 151 (326)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT---TTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEecHHHHHHHHHHHhCCC---CCCCcEEEEEECCc-eEEEEE
Confidence 4776 67999999999875433211 23467888889988 555555
No 70
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=94.79 E-value=0.032 Score=62.21 Aligned_cols=80 Identities=15% Similarity=0.205 Sum_probs=55.0
Q ss_pred cHHHHHH-HHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhh
Q 004296 299 KREEFEE-LASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQC 377 (763)
Q Consensus 299 tr~efe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a 377 (763)
+|.++-+ +++.+.-.+...++..-+..+. .++.|.++||+++.+.+.+++.+.+|.++... .+.|+.|+|||+.|
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~-~~~e~~alGaA~la 443 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLAMEEEAGV---RLKVLKADGGMAQNRLFLKIQADLLGVPVAVP-EVTETTALGAALMA 443 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecccccCHHHHHHHHHHhCCeeEec-CCcccHHHHHHHHH
Confidence 5555443 3333333344444332222343 46789999999999999999999999988654 45679999999999
Q ss_pred hhhCC
Q 004296 378 AMLSP 382 (763)
Q Consensus 378 ~~~s~ 382 (763)
+.-.+
T Consensus 444 ~~a~G 448 (495)
T 2dpn_A 444 GVGAG 448 (495)
T ss_dssp HHHHT
T ss_pred HhhcC
Confidence 86544
No 71
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=94.52 E-value=0.047 Score=60.72 Aligned_cols=78 Identities=17% Similarity=0.072 Sum_probs=53.1
Q ss_pred EecHHHHHHHH-hhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHH
Q 004296 297 FIKREEFEELA-SGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCAL 375 (763)
Q Consensus 297 ~itr~efe~l~-~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~ 375 (763)
.-+|.+|-+.+ +.+.-.+...++..-+..|. .++.|.++||+++.+.+.+.+.+.||.++.... .|+.|+|||+
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGaa~ 435 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGNIG 435 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHHHH
Confidence 44676665433 33333344444333222454 367899999999999999999999999886543 6899999965
Q ss_pred hhhh
Q 004296 376 QCAM 379 (763)
Q Consensus 376 ~a~~ 379 (763)
.|..
T Consensus 436 ~A~~ 439 (489)
T 2uyt_A 436 IQLM 439 (489)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 72
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.38 E-value=0.05 Score=60.74 Aligned_cols=81 Identities=12% Similarity=0.197 Sum_probs=57.0
Q ss_pred cHHHHHHH-HhhHHHHHHHHHHHHHHHcCCCCCCc-cEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHh
Q 004296 299 KREEFEEL-ASGLTEKIAIPCRKALADAGLHVDKI-HSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQ 376 (763)
Q Consensus 299 tr~efe~l-~~~~~~~i~~~i~~~l~~~~~~~~~i-~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~ 376 (763)
+|.++-+. ++.+.-.+...++..-+..|. .+ +.|.++||+++.+.+.+.+.+.+|.++... ...|+.|+|||+.
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~-~~~e~~alGaA~l 451 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVS-KYKEVTSLGAAVL 451 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHHCCeEEec-CCCcchHHHHHHH
Confidence 56555443 333444444444433333454 35 679999999999999999999999988654 4567999999999
Q ss_pred hhhhCCC
Q 004296 377 CAMLSPA 383 (763)
Q Consensus 377 a~~~s~~ 383 (763)
|+.-.+.
T Consensus 452 a~~~~G~ 458 (503)
T 2w40_A 452 AGLEVKI 458 (503)
T ss_dssp HHHHTTC
T ss_pred HHHHhCc
Confidence 9876553
No 73
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=94.24 E-value=0.1 Score=45.69 Aligned_cols=70 Identities=14% Similarity=0.278 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC------CCcchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCceeHHHHHHHHHHHHH
Q 004296 677 ARAQATRDLLQCIVEYRTAVGS------LPPEEQDFIISECYKAEQWLREIAQQQDSLPKNTDPILWSGDIKRRTEDLKL 750 (763)
Q Consensus 677 ~rp~a~~~l~~~l~~~~~~~~~------i~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~ 750 (763)
.+-++...+...|..+++.+.. ++++++..|.+.|+++..||+.. + .-...+|+.++++|+.
T Consensus 15 e~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~---~---------~ad~e~ik~k~~eL~~ 82 (120)
T 2p32_A 15 VPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSN---Q---------TAEKEEFEHQQKDLEG 82 (120)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHH---T---------TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcC---C---------cCCHHHHHHHHHHHHH
Confidence 4455566666777766665542 89999999999999999999741 1 1225899999999999
Q ss_pred HHHhhhcC
Q 004296 751 KCQHLLKG 758 (763)
Q Consensus 751 ~~~~l~~~ 758 (763)
.+.+|+.+
T Consensus 83 ~~~~i~~k 90 (120)
T 2p32_A 83 LANPIISK 90 (120)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999854
No 74
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=93.97 E-value=0.27 Score=47.98 Aligned_cols=46 Identities=22% Similarity=0.232 Sum_probs=41.0
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCceeHHHHHHHHHHHHHHHHhhhcC
Q 004296 698 SLPPEEQDFIISECYKAEQWLREIAQQQDSLPKNTDPILWSGDIKRRTEDLKLKCQHLLKG 758 (763)
Q Consensus 698 ~i~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~l~~~ 758 (763)
.+++++++.+.+.++++..||+.. ...+++.++++|+..|.+++.+
T Consensus 168 ~l~~~~k~~i~~~l~~~~~~L~~~---------------~~~~i~~~~~~L~~~~~~i~~~ 213 (219)
T 4e81_A 168 KLPADDKTAIESALTALETALKGE---------------DKAAIEAKMQELAQVSQKLMEI 213 (219)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHSS---------------CHHHHHHHHHHHHHHTHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHHHHHHHHHHHHHHHHH
Confidence 489999999999999999999762 3689999999999999999854
No 75
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=93.78 E-value=1.6 Score=46.50 Aligned_cols=42 Identities=19% Similarity=0.331 Sum_probs=29.2
Q ss_pred cCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEE
Q 004296 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (763)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 211 (763)
.|++ +.+.|+..|+|++...... .. .+++++-+|.| +-.+++
T Consensus 188 ~~~p-V~v~NDanaaalaE~~~g~----~~-~~~v~l~~GtG-iG~giv 229 (380)
T 2hoe_A 188 YGIE-VWVENDADMGAVGEKWYTK----RD-DSFAWILTGKG-IGAGII 229 (380)
T ss_dssp HCSE-EEEEEHHHHHHHHHHHHTT----CC-SCEEEEEESSS-CEEEEE
T ss_pred hCCC-EEEechHHHHHHHHHHhCC----CC-CcEEEEEeCCc-eEEEEE
Confidence 4776 6899999999987544322 12 67888888887 445555
No 76
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=93.77 E-value=2.3 Score=44.10 Aligned_cols=44 Identities=16% Similarity=0.058 Sum_probs=29.2
Q ss_pred cCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEE
Q 004296 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (763)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 211 (763)
.|++ +.+.|+..|+|++-...... .....++++-+|.| .-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~---~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEF---TQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTG---GGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcC---CCCCcEEEEEECCc-EEEEEE
Confidence 4776 68999999999875433211 12467888889987 445554
No 77
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=93.00 E-value=3.1 Score=44.61 Aligned_cols=44 Identities=18% Similarity=0.363 Sum_probs=29.8
Q ss_pred cCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEE
Q 004296 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (763)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 211 (763)
.|++ +.+.|+..|+|++....... ....+++++-+|.| +-.+++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~---~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGAS---RGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTT---TTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCC---CCCCcEEEEEECCc-EEEEEE
Confidence 4776 67999999999875443211 23457888888887 555555
No 78
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=91.85 E-value=0.13 Score=56.72 Aligned_cols=71 Identities=18% Similarity=0.050 Sum_probs=51.2
Q ss_pred HHHhhHHHH--HHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhh-cCCCCccCCCchhHHhcchHHhhhhh
Q 004296 305 ELASGLTEK--IAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSL-FGREPRRSLNASECVARGCALQCAML 380 (763)
Q Consensus 305 ~l~~~~~~~--i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~-fg~~~~~~~n~~eava~Gaa~~a~~~ 380 (763)
.++.-+++. +.-.+...++... ..+.|.++||+++.|.+.+.+.+. ||.++.+. ...|+.|+|||++|+.-
T Consensus 363 ~l~RA~lE~~Gia~~~r~~l~~~~----~~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~-~~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 363 WFERRAAACLYAALVADTALDLIG----STGRILVEGRFAEADVFVRALASLRPDCAVYTA-NAHNDVSFGALRLIDPG 436 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT----CCSEEEEESGGGGCHHHHHHHHHHSTTSEEEEE-SSCCCTTGGGHHHHCTT
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhc----CCCeEEEeCCcccCHHHHHHHhhhcCCCeEEEc-CCCchHHHHHHHHhCcc
Confidence 344444442 3333444444432 227899999999999999999999 99988665 45678899999999864
No 79
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=91.36 E-value=18 Score=40.14 Aligned_cols=183 Identities=14% Similarity=0.093 Sum_probs=90.1
Q ss_pred CcceEEEEe-cCCCCHHHHHHHHHH---HHHcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEE
Q 004296 136 PVVDCVIGV-PSYFTDLQRREYLNA---ASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (763)
Q Consensus 136 ~~~~~VitV-P~~~~~~qr~~l~~A---a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 211 (763)
.+.-+++|. |.+|+.- |-.+.-| |...|++.+. ++.-.|=+++..... . ...+ +++-+.||+|.+..+
T Consensus 72 ~id~ia~~~gPG~~~~l-~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~-~--~~~p---~~l~vsGg~t~~~~~ 143 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSL-RVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTT-E--AEDP---LTLYVSGGNTQVIAY 143 (540)
T ss_dssp GCCEEEEEEESSCHHHH-HHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHS-S--CSSC---EEEEECSSCEEEEEE
T ss_pred HCcEEEEecCCCchhhH-HHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhc-C--CCCC---cEEEEcCCCcEEEEE
Confidence 455666665 6665543 3222222 2334666544 444444333222211 1 1223 555566788876544
Q ss_pred EEeCCeEEEEEEeCCCCCchHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHhhhcCCCCceeEEeecccCC
Q 004296 212 SFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDE 291 (763)
Q Consensus 212 ~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~ 291 (763)
..+.+++++...| .--|+.||..= .. .++.....+ .|...|..... .+.++....+
T Consensus 144 --~~~~~~~lg~t~d-~s~G~~~D~~a-~~--------lgl~~~gg~----~ie~lA~~g~~--------~~~~p~~~~~ 199 (540)
T 3en9_A 144 --VSKKYRVFGETLD-IAVGNCLDQFA-RY--------VNLPHPGGP----YIEELARKGKK--------LVDLPYTVKG 199 (540)
T ss_dssp --ETTEEEEEEEBSS-SCHHHHHHHHH-HH--------TTCCSSCHH----HHHHHHHTCCC--------CCCCCCCEET
T ss_pred --eCCceEEEeeccc-hHhHHHHHHHH-HH--------cCCCCCCHH----HHHHHHHcCCc--------cCcCCCCCCC
Confidence 4688999998755 34567776432 11 133222212 22222322211 0111111112
Q ss_pred cceEEE-------------ecHHHHHHHHh-hHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhc
Q 004296 292 KDVRGF-------------IKREEFEELAS-GLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLF 355 (763)
Q Consensus 292 ~d~~~~-------------itr~efe~l~~-~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~f 355 (763)
.+|++. .+.+++-..++ -+++-+...+.++++..+ ++.|+|+||.+....+++.+.+.+
T Consensus 200 ~~~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~ 272 (540)
T 3en9_A 200 MDIAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMC 272 (540)
T ss_dssp TEECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHH
T ss_pred cceecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHH
Confidence 222110 01222222222 234444555666666665 468999999999999999999877
No 80
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=91.20 E-value=0.15 Score=44.00 Aligned_cols=64 Identities=14% Similarity=0.346 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHhc------CCCcchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCceeHHHHHHHHHHHHHHHHhhh
Q 004296 683 RDLLQCIVEYRTAVG------SLPPEEQDFIISECYKAEQWLREIAQQQDSLPKNTDPILWSGDIKRRTEDLKLKCQHLL 756 (763)
Q Consensus 683 ~~l~~~l~~~~~~~~------~i~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~l~ 756 (763)
..+.+.|..+++.+. .++++++..|...|+++..||+.... -...+|+.+++.|++.+.+|+
T Consensus 7 N~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~------------ad~~~i~~~~~~L~~~~~~i~ 74 (113)
T 1ud0_A 7 HMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQT------------AEKEEFEHQQKELEKVCNPII 74 (113)
T ss_dssp HHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCc------------cCHHHHHHHHHHHHHHHHHHH
Confidence 344555555555554 39999999999999999999974211 113789999999999999998
Q ss_pred cC
Q 004296 757 KG 758 (763)
Q Consensus 757 ~~ 758 (763)
.+
T Consensus 75 ~~ 76 (113)
T 1ud0_A 75 TK 76 (113)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 81
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=91.13 E-value=1.1 Score=43.93 Aligned_cols=46 Identities=11% Similarity=0.073 Sum_probs=39.7
Q ss_pred cCCCcchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCceeHHHHHHHHHHHHHHHHhhhc
Q 004296 697 GSLPPEEQDFIISECYKAEQWLREIAQQQDSLPKNTDPILWSGDIKRRTEDLKLKCQHLLK 757 (763)
Q Consensus 697 ~~i~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~l~~ 757 (763)
..++++++..+.+.+++++.||+.. ...+++.++++|+..+.+|..
T Consensus 164 ~~~~~~~k~~i~~~l~~~~~wl~~~---------------d~~~~~~~~~~L~~~~~~i~~ 209 (227)
T 1u00_A 164 ALLSAAERQVIDDAAAHLSEVAQGD---------------DVDAIEQAIKNVDKQTQDFAA 209 (227)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHTTSS---------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHHHHHHHHHHHHHHHH
Confidence 3489999999999999999999731 258999999999999999874
No 82
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=90.35 E-value=0.35 Score=50.17 Aligned_cols=78 Identities=13% Similarity=0.056 Sum_probs=47.6
Q ss_pred HHHHHHHHHcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCchHH
Q 004296 154 REYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRD 233 (763)
Q Consensus 154 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~ 233 (763)
..+..+-+..|+++--|-.|-+|.-...+... .++ ......+|+|+|||+|.++++. ++.+ ... ...++|...
T Consensus 93 ~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~-~~~-~~~~~~lviDIGGGStEl~~~~--~~~~--~~~-~Sl~lG~vr 165 (315)
T 3mdq_A 93 VLIDRIKKEVNIDVEVIDGAREAELIFRGVQQ-AVP-MEDHISLAMDIGGGSVEFIIGN--KNEI--LWK-QSFEIGGQR 165 (315)
T ss_dssp HHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH-HSC-CTTCCEEEEEECSSCEEEEEEC--SSCE--EEE-EEESCCHHH
T ss_pred HHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHh-cCC-CCCCCEEEEEeCCCceEEEEEE--CCeE--eee-EEEechhhH
Confidence 44555556679986444445555443334332 222 1235799999999999999875 3333 222 246899888
Q ss_pred HHHHH
Q 004296 234 FDDVL 238 (763)
Q Consensus 234 ~D~~l 238 (763)
+.+.+
T Consensus 166 l~e~f 170 (315)
T 3mdq_A 166 LIDRF 170 (315)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 87754
No 83
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=90.05 E-value=1.1 Score=46.84 Aligned_cols=80 Identities=20% Similarity=0.248 Sum_probs=48.1
Q ss_pred HHHHHHHHHcCCceeeeecchHHHHHhh-hccccCCCC-CCcceEEEEEeCCceeEEEEEEE--eC--CeEEEEEEeCCC
Q 004296 154 REYLNAASIAGLRPLRLIHDCTATALGY-GIYKTDFAN-GGKSYIAFVDIGHSDTQVSIVSF--EA--GHMKVLSHAFDS 227 (763)
Q Consensus 154 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~-~~~~~vlv~D~GggT~dvsv~~~--~~--~~~~vl~~~~~~ 227 (763)
..+..+-+..|+++ .+|+-..=|.+.| +... .++. .....++++|+|||||+++++.- .. +.+ .. ....
T Consensus 106 ~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~-~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~--~~-~~Sl 180 (343)
T 3cer_A 106 EFEDEIERILGVRP-EVIPGTEEADLSFLGATS-VVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV--QG-AFSM 180 (343)
T ss_dssp HHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHS-SCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC--SE-EEEE
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHh-hCccccccCCEEEEEeCCCceEEEEeecCccCccccc--ce-eEEE
Confidence 44555555679986 5665555444444 3322 2221 12356999999999999998753 21 111 11 2246
Q ss_pred CCchHHHHHHH
Q 004296 228 SLGGRDFDDVL 238 (763)
Q Consensus 228 ~lGG~~~D~~l 238 (763)
++|+..+.+.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 89999998876
No 84
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=89.77 E-value=0.73 Score=53.08 Aligned_cols=70 Identities=16% Similarity=0.108 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcC-----CCcchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCceeHHHHHHHHHHHHHHH
Q 004296 678 RAQATRDLLQCIVEYRTAVGS-----LPPEEQDFIISECYKAEQWLREIAQQQDSLPKNTDPILWSGDIKRRTEDLKLKC 752 (763)
Q Consensus 678 rp~a~~~l~~~l~~~~~~~~~-----i~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 752 (763)
+-++.+.|.+.+..++..+.. +++++++.+.+.+++++.||.+.- .--+..+++.|+++|+..+
T Consensus 549 ~~~~~n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~-----------~~~~~~~~~~~~~~l~~~~ 617 (675)
T 3d2f_A 549 TEDRKNTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEG-----------FDSIKAKYIAKYEELASLG 617 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHTTTGG-----------GGCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhcCC-----------chhhHHHHHHHHHHHHHHH
Confidence 344455555566555555532 899999999999999999996411 0114678999999999999
Q ss_pred HhhhcC
Q 004296 753 QHLLKG 758 (763)
Q Consensus 753 ~~l~~~ 758 (763)
++|..+
T Consensus 618 ~~i~~r 623 (675)
T 3d2f_A 618 NIIRGR 623 (675)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999843
No 85
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=88.29 E-value=1.2 Score=49.54 Aligned_cols=75 Identities=16% Similarity=0.158 Sum_probs=46.3
Q ss_pred HHHHHHHHcCCceeeeecchHHHHHhh-hccccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCchHH
Q 004296 155 EYLNAASIAGLRPLRLIHDCTATALGY-GIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRD 233 (763)
Q Consensus 155 ~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~ 233 (763)
.+..+-+..|+++ .+|+-..=|.+.| |+.. .++. ....+|+|+|||+|.++++. ++.+ ... ...++|...
T Consensus 101 fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~-~~~~--~~~~lviDIGGGStEl~~~~--~~~~--~~~-~Sl~lG~vr 171 (513)
T 1u6z_A 101 FLKRAEKVIPYPI-EIISGNEEARLIFMGVEH-TQPE--KGRKLVIDIGGGSTELVIGE--NFEP--ILV-ESRRMGCVS 171 (513)
T ss_dssp HHHHHTTTCSSCE-EECCHHHHHHHHHHHHHH-HSCC--CSCEEEEEECSSCEEEEEEE--TTEE--EEE-EEESCCHHH
T ss_pred HHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHh-hccC--CCCEEEEEECCCcEEEEEEe--CCee--eEE-EEEeccHHH
Confidence 3444445569886 5665554444444 4332 2221 22699999999999999864 4443 222 246899999
Q ss_pred HHHHH
Q 004296 234 FDDVL 238 (763)
Q Consensus 234 ~D~~l 238 (763)
+.+.+
T Consensus 172 lte~f 176 (513)
T 1u6z_A 172 FAQLY 176 (513)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87765
No 86
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=85.80 E-value=3.1 Score=47.15 Aligned_cols=47 Identities=21% Similarity=0.227 Sum_probs=41.1
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCceeHHHHHHHHHHHHHHHHhhhcCC
Q 004296 698 SLPPEEQDFIISECYKAEQWLREIAQQQDSLPKNTDPILWSGDIKRRTEDLKLKCQHLLKGE 759 (763)
Q Consensus 698 ~i~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~l~~~~ 759 (763)
.+++++++.+.+.+++++.||+.. ...+++.++++|++.|.+++.++
T Consensus 556 ~~~~~~~~~~~~~~~~~~~~l~~~---------------~~~~~~~~~~~l~~~~~~~~~~~ 602 (605)
T 4b9q_A 556 KLPADDKTAIESALTALETALKGE---------------DKAAIEAKMQELAQVSQKLMEIA 602 (605)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHSS---------------CHHHHHHHHHHHHHHTHHHHHHC
T ss_pred hCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHHHHHHHHHHHHHHHHHH
Confidence 489999999999999999999741 15899999999999999998654
No 87
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=84.88 E-value=0.63 Score=38.93 Aligned_cols=21 Identities=24% Similarity=0.325 Sum_probs=18.8
Q ss_pred CeEEEEEccccceEEEEEeCC
Q 004296 1 MSVVGFDIGNENCVIATVKHR 21 (763)
Q Consensus 1 m~vvGID~Gtt~s~va~~~~~ 21 (763)
|.++|||+|+..+.+|+.++.
T Consensus 1 mriLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSC
T ss_pred CcEEEEEeCCCEEEEEEEeCC
Confidence 789999999999999998754
No 88
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=84.54 E-value=8.3 Score=42.08 Aligned_cols=58 Identities=12% Similarity=-0.070 Sum_probs=42.0
Q ss_pred CHHHHHHHHHHHHHcCCc--eeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEE
Q 004296 149 TDLQRREYLNAASIAGLR--PLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSF 213 (763)
Q Consensus 149 ~~~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~ 213 (763)
...-.+.+.+|.+.-|++ ++.++|+.+|++++.++.. +..++.+=+|-|+=-+.+...
T Consensus 184 G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~-------~~~~iglIlGTG~N~~y~e~~ 243 (485)
T 3o8m_A 184 GHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD-------PQTKMGIIIGTGVNGAYYDVV 243 (485)
T ss_dssp TSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC-------TTEEEEEEESSSEEEEEEEEG
T ss_pred CccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC-------CCcEEEEEEecCcceEEEeec
Confidence 456678899999888886 4789999999999876542 345565667887665555544
No 89
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=84.53 E-value=2 Score=48.75 Aligned_cols=47 Identities=21% Similarity=0.258 Sum_probs=40.6
Q ss_pred cCCCcchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCceeHHHHHHHHHHHHHHHHhhhcC
Q 004296 697 GSLPPEEQDFIISECYKAEQWLREIAQQQDSLPKNTDPILWSGDIKRRTEDLKLKCQHLLKG 758 (763)
Q Consensus 697 ~~i~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~l~~~ 758 (763)
..+++++++.+.+.+++++.||+. + ...+++.++++|++.+.++..+
T Consensus 555 ~~~~~~~~~~i~~~~~~~~~~l~~----~-----------~~~~~~~~~~~l~~~~~~~~~~ 601 (605)
T 2kho_A 555 DKLPADDKTAIESALTALETALKG----E-----------DKAAIEAKMQELAQVSQKLMEI 601 (605)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHTTS----S-----------CHHHHHHHHHHHHTTCHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhc----C-----------CHHHHHHHHHHHHHHHHHHHHH
Confidence 348999999999999999999973 1 4689999999999999998754
No 90
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=83.88 E-value=2.5 Score=46.81 Aligned_cols=75 Identities=16% Similarity=0.157 Sum_probs=45.6
Q ss_pred HHHHHHHHHHcCCceeeeecch-HHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCch
Q 004296 153 RREYLNAASIAGLRPLRLIHDC-TATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGG 231 (763)
Q Consensus 153 r~~l~~Aa~~AGl~~~~li~Ep-~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG 231 (763)
...+..+-+..|+++ .+|+-. +|.-.+.|+... ++ ....+|+|+|||+|.++++. ++.+ .. ....++|.
T Consensus 103 ~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~-~~---~~~~lvvDIGGGStEl~~~~--~~~~--~~-~~Sl~lG~ 172 (508)
T 3hi0_A 103 PDFIREAEAILGCEI-EVLSGEKEALYSAYGVISG-FY---QPDGIAGDLGGGSLELIDIK--DKSC--GE-GITLPLGG 172 (508)
T ss_dssp HHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHH-SS---SCEEEEEEECSSCEEEEEEE--TTEE--CC-CEEESCCH
T ss_pred HHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhc-CC---CCCeEEEEeCCCceEEEEee--CCee--ee-EEEecceE
Confidence 344555556679986 555544 444433444322 22 12359999999999999975 4433 21 22467998
Q ss_pred HHHHHH
Q 004296 232 RDFDDV 237 (763)
Q Consensus 232 ~~~D~~ 237 (763)
..+.+.
T Consensus 173 vrl~e~ 178 (508)
T 3hi0_A 173 LRLSEQ 178 (508)
T ss_dssp HHHHHH
T ss_pred Eehhhc
Confidence 888763
No 91
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=80.06 E-value=18 Score=40.23 Aligned_cols=66 Identities=14% Similarity=0.025 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCC-CCcc-CCCchhHHhcchHHhhhhhCC
Q 004296 312 EKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGR-EPRR-SLNASECVARGCALQCAMLSP 382 (763)
Q Consensus 312 ~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~-~~~~-~~n~~eava~Gaa~~a~~~s~ 382 (763)
+-+...+..+.+..+ ++.|+|.||.+....+.+.|.+..+. .+.. +.-.|.++++|+|+++....+
T Consensus 293 ~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a~~~~g 360 (576)
T 3ven_A 293 RAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAVAVELG 360 (576)
T ss_dssp HHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHHHHHcC
Confidence 334445555555554 67899999999999999999877653 3222 235589999999999876644
No 92
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=79.88 E-value=31 Score=34.08 Aligned_cols=45 Identities=20% Similarity=0.367 Sum_probs=29.4
Q ss_pred cCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEE
Q 004296 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (763)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 211 (763)
.|++ +.+.|+..|+|++....... ......++++-+|.| .-.+++
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~--~~~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAG--AGVKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTT--TTCCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCC--CCCCCcEEEEEECcc-eEEEEE
Confidence 4776 68999999999885443221 011235778888887 666654
No 93
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=78.73 E-value=1.1 Score=40.71 Aligned_cols=21 Identities=19% Similarity=0.477 Sum_probs=18.4
Q ss_pred CeEEEEEccccceEEEEEeCC
Q 004296 1 MSVVGFDIGNENCVIATVKHR 21 (763)
Q Consensus 1 m~vvGID~Gtt~s~va~~~~~ 21 (763)
|.++|||+|+..|.+|+.+..
T Consensus 3 mriLGiDpG~~riGvAv~d~~ 23 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEM 23 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTT
T ss_pred CEEEEEEccCCEEEEEEEECC
Confidence 678999999999999998754
No 94
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=78.49 E-value=2.3 Score=44.65 Aligned_cols=19 Identities=16% Similarity=0.392 Sum_probs=17.0
Q ss_pred cceEEEEEeCCceeEEEEE
Q 004296 193 KSYIAFVDIGHSDTQVSIV 211 (763)
Q Consensus 193 ~~~vlv~D~GggT~dvsv~ 211 (763)
+.+++|+|+|||+|++++.
T Consensus 139 ~~t~~v~DiGGGStei~~~ 157 (353)
T 3aap_A 139 NKSVGVMDMGGASVQIVFP 157 (353)
T ss_dssp SSCEEEEEECSSEEEEEEE
T ss_pred cccEEEEEeCCCceEEEEe
Confidence 4579999999999999987
No 95
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=78.37 E-value=8.8 Score=41.65 Aligned_cols=56 Identities=13% Similarity=-0.068 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHcCCc--eeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEEE
Q 004296 151 LQRREYLNAASIAGLR--PLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSF 213 (763)
Q Consensus 151 ~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~ 213 (763)
.-++.|.++....|++ ++.++|+..|++++-.... ..+++.+=+|-|+=-..+...
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~-------~~~~iglilGTGvgg~~i~~~ 221 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTD-------AXIKMGIIFGSGVNAAYWCDS 221 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHC-------TTEEEEEEESSSEEEEEEECG
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcC-------CccEEEEEECcEEEEEEEECC
Confidence 4567777887666765 5899999999999876521 346677778888555555443
No 96
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=77.58 E-value=17 Score=36.95 Aligned_cols=51 Identities=18% Similarity=0.279 Sum_probs=33.1
Q ss_pred HHHHHHHHHHcCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEE
Q 004296 153 RREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (763)
Q Consensus 153 r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 211 (763)
++.+.+. .|++ +.+.|+..|+|++-...... ...++++++-+|.| .-.+++
T Consensus 90 ~~~l~~~---~~~p-V~v~NDanaaalaE~~~G~~---~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 90 LQTVXNE---MXIP-VGFSTDVNAAALGEFLFGEA---XGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HHHHHHH---HCSC-EEEEEHHHHHHHHHHHHSTT---TTCSCEEEEEESSS-EEEEEE
T ss_pred HHHHHHH---hCCC-EEEechhHHHHHHHHHhCCC---CCCCcEEEEEECCc-eEEEEE
Confidence 4444443 3776 68999999999875543221 23467888888876 555554
No 97
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=74.52 E-value=4.8 Score=46.75 Aligned_cols=63 Identities=16% Similarity=0.205 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhc---CCCCccCC---CchhHHhcchHHhhhhhC
Q 004296 314 IAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLF---GREPRRSL---NASECVARGCALQCAMLS 381 (763)
Q Consensus 314 i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~f---g~~~~~~~---n~~eava~Gaa~~a~~~s 381 (763)
+...+.++.++.| ++.|+|.||......+.+.|.+.+ |.++..+. --|..+|+|+|++|+..-
T Consensus 693 L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~L 761 (772)
T 4g9i_A 693 FAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLYL 761 (772)
T ss_dssp HHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHHH
Confidence 3444455555444 567999999999999999999887 44454432 238999999998887643
No 98
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=70.11 E-value=40 Score=36.05 Aligned_cols=44 Identities=23% Similarity=0.298 Sum_probs=29.9
Q ss_pred cCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEE
Q 004296 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (763)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 211 (763)
.|++ +.+.|+..|+|++-...... ....+++++-+|.| +-.+++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~---~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHS---QDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT---TTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCC---CCCCcEEEEEECCc-EEEEEE
Confidence 4776 58999999999875443221 23467888888887 455555
No 99
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=68.03 E-value=7.5 Score=44.03 Aligned_cols=49 Identities=10% Similarity=-0.012 Sum_probs=39.3
Q ss_pred CccEEEEecCCCChHHHHHHHHhhc-CCCCcc---CCCchhHHhcchHHhhhh
Q 004296 331 KIHSVEIVGSGSRIPAITRLLTSLF-GREPRR---SLNASECVARGCALQCAM 379 (763)
Q Consensus 331 ~i~~V~lvGG~srip~v~~~l~~~f-g~~~~~---~~n~~eava~Gaa~~a~~ 379 (763)
.++.|+|+||.+....+++.|.+.+ |.++.. ..-.|.++|+|.|+.|+.
T Consensus 599 g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 599 GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 3578999999999999999999988 544322 234599999999998864
No 100
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=67.84 E-value=92 Score=30.19 Aligned_cols=44 Identities=7% Similarity=0.059 Sum_probs=31.8
Q ss_pred CCHHHHHHHHHHHHHHhcCchhHHHHHHHhhhhHHHHHHHHHHhhh
Q 004296 572 MTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFS 617 (763)
Q Consensus 572 ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~ 617 (763)
=|-.+++........+...+ +..+..-|+.||..++.++.+|..
T Consensus 41 ~sl~~vq~~l~~f~~fr~~e--kppk~~EK~~Le~ll~~lqtklr~ 84 (235)
T 2odv_A 41 SSFEEIEILWSQFLKFKEME--LPAKEADKNRSKGIYQSLEGAVQA 84 (235)
T ss_dssp SSHHHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHhcc--CCHHHHHHHHHHHHHHHHHHHHHc
Confidence 45566677767777776544 366778888888888888888863
No 101
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=66.65 E-value=7.7 Score=42.05 Aligned_cols=20 Identities=25% Similarity=0.484 Sum_probs=17.1
Q ss_pred cceEEEEEeCCceeEEEEEE
Q 004296 193 KSYIAFVDIGHSDTQVSIVS 212 (763)
Q Consensus 193 ~~~vlv~D~GggT~dvsv~~ 212 (763)
...++++|||||+|+++...
T Consensus 189 ~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp CCCCEEEEECSSEEEEEEEC
T ss_pred CCceEEEEcCCCceEEEecc
Confidence 45689999999999999874
No 102
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=65.56 E-value=6 Score=36.09 Aligned_cols=19 Identities=16% Similarity=0.345 Sum_probs=17.4
Q ss_pred CeEEEEEccccceEEEEEe
Q 004296 1 MSVVGFDIGNENCVIATVK 19 (763)
Q Consensus 1 m~vvGID~Gtt~s~va~~~ 19 (763)
|.|+|||-|++++..+++.
T Consensus 1 m~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEE
Confidence 8899999999999999875
No 103
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=65.14 E-value=8.7 Score=41.62 Aligned_cols=62 Identities=8% Similarity=-0.017 Sum_probs=42.7
Q ss_pred ecCCCCHHHHHHHHHHHHHcCCc--eeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEE
Q 004296 144 VPSYFTDLQRREYLNAASIAGLR--PLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVS 212 (763)
Q Consensus 144 VP~~~~~~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~ 212 (763)
+|.+-...-.+.|.+|...-|++ ++.++|+.+|++++.+... +..++.+=+|-|+=-+.+..
T Consensus 166 ~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~-------~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 166 ADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED-------PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp CBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEE
T ss_pred CCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC-------CCcEEEEEEeCCcceEEEEc
Confidence 34433556678888888777876 3589999999998776542 34666666888855544444
No 104
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=64.79 E-value=20 Score=39.37 Aligned_cols=44 Identities=14% Similarity=0.086 Sum_probs=32.6
Q ss_pred ceEEEEecCCCCHHHHHHHHHHHHHcCCceeeee-cchHHHHHhh
Q 004296 138 VDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLI-HDCTATALGY 181 (763)
Q Consensus 138 ~~~VitVP~~~~~~qr~~l~~Aa~~AGl~~~~li-~Ep~Aaal~y 181 (763)
..++.-+|..++...-..+.+++...|+++...| ---.++.++.
T Consensus 131 ~~~I~v~~~~i~~~d~a~~in~a~~~g~~i~~~i~q~dd~vli~n 175 (607)
T 1nbw_A 131 EGWIVLIDDAVDFLDAVWWLNEALDRGINVVAAILKKDDGVLVNN 175 (607)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHHHTTCCEEEEEESSSCHHHHHT
T ss_pred CCEEEECCCccCHHHHHHHHHHHHHcCCcEEEEEEecCCEEEEcc
Confidence 3455559999999999999999999999976654 3334444443
No 105
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=64.10 E-value=5.1 Score=35.66 Aligned_cols=21 Identities=19% Similarity=0.377 Sum_probs=18.3
Q ss_pred eEEEEEccccceEEEEEeCCc
Q 004296 2 SVVGFDIGNENCVIATVKHRG 22 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~ 22 (763)
.++|||||+..+.||+.++.+
T Consensus 4 ~iLglD~G~kriGvAvsd~~~ 24 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRIT 24 (138)
T ss_dssp EEEEEECCSSEEEEEEEETTT
T ss_pred eEEEEEeCCCEEEEEEEcCCC
Confidence 489999999999999987653
No 106
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=63.80 E-value=9.9 Score=39.72 Aligned_cols=69 Identities=13% Similarity=0.096 Sum_probs=45.1
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcC-CCC------ccCCCchhHHhcchHHhh
Q 004296 305 ELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFG-REP------RRSLNASECVARGCALQC 377 (763)
Q Consensus 305 ~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg-~~~------~~~~n~~eava~Gaa~~a 377 (763)
.+..-+.+-+...|-+.+.... ..+.|+++||+++.|.+.++|++.++ .++ ..+.+.-||+|. |++|
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF--A~LA 340 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF--AWLA 340 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH--HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH--HHHH
Confidence 4444444555555666665542 35689999999999999999999994 233 223455566665 5555
Q ss_pred hh
Q 004296 378 AM 379 (763)
Q Consensus 378 ~~ 379 (763)
..
T Consensus 341 ~~ 342 (370)
T 3cqy_A 341 MR 342 (370)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 107
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=63.52 E-value=12 Score=39.05 Aligned_cols=69 Identities=22% Similarity=0.138 Sum_probs=43.2
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcC-CCC------ccCCCchhHHhcchHHhhh
Q 004296 306 LASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFG-REP------RRSLNASECVARGCALQCA 378 (763)
Q Consensus 306 l~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg-~~~------~~~~n~~eava~Gaa~~a~ 378 (763)
+..-+.+-+...|-+.++...- .++.|+++||+++.|.+.++|++.++ ..+ ..+.+.-||+| -|++|.
T Consensus 261 v~ATLt~~TA~sIa~~~~~~~~---~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~a--FA~LA~ 335 (371)
T 3qbx_A 261 IQATLLELSARSISESLLDAQP---DCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMA--FAWLAH 335 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT---TCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHH--HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccC---CCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHH--HHHHHH
Confidence 3334444444455555554331 46789999999999999999999985 333 22234445554 556665
Q ss_pred h
Q 004296 379 M 379 (763)
Q Consensus 379 ~ 379 (763)
.
T Consensus 336 ~ 336 (371)
T 3qbx_A 336 R 336 (371)
T ss_dssp H
T ss_pred H
Confidence 4
No 108
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=63.08 E-value=5 Score=36.90 Aligned_cols=20 Identities=30% Similarity=0.350 Sum_probs=17.9
Q ss_pred CeEEEEEccccceEEEEEeC
Q 004296 1 MSVVGFDIGNENCVIATVKH 20 (763)
Q Consensus 1 m~vvGID~Gtt~s~va~~~~ 20 (763)
|-|+|||.|++.+..++++.
T Consensus 1 MrILGIDPGl~~tG~gvi~~ 20 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVAV 20 (166)
T ss_dssp CEEEEEECCSSEEEEEEEEE
T ss_pred CEEEEEccccCceEEEEEEe
Confidence 88999999999999998753
No 109
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=62.46 E-value=88 Score=31.56 Aligned_cols=23 Identities=4% Similarity=-0.097 Sum_probs=17.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHh
Q 004296 703 EQDFIISECYKAEQWLREIAQQQ 725 (763)
Q Consensus 703 e~~~v~~~~~~~~~Wl~~~~~~q 725 (763)
+...+...++++..|+.++...-
T Consensus 218 ~~~~f~~~~~e~~~Wl~ek~~~L 240 (326)
T 3kbt_A 218 DLHRYFYTGAEILGLIDEKHREL 240 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Confidence 34567778999999999987654
No 110
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=60.59 E-value=35 Score=34.05 Aligned_cols=166 Identities=14% Similarity=0.198 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhc--CchhHHHHHHHhhhhHHHHHHHHHHhhhhhc------cCCCHHHHHHHHHHHHHHHHHhhcC
Q 004296 574 KPELALAQETENLLAQ--QDITMEQTKDKKNALESYVYEMRNKLFSTYR------SFASDQEREGISRSLQETEEWLYDD 645 (763)
Q Consensus 574 ~~ei~~~~~~~~~~~~--~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~------~~~~~~e~~~l~~~l~e~~~WL~~~ 645 (763)
..+++.++.++.-+.. ........++.|+.|..|.-++|.++..... ....++-|+++..-++++..-|.--
T Consensus 43 ~~~le~lr~~L~Py~~el~~~~~~~~eelr~kL~p~~~el~~~l~~~~eeLr~~L~p~~eelr~kl~~~veelk~~L~Py 122 (273)
T 3s84_A 43 GDNLRELQQRLEPYADQLRTQVNTQAEQLRRQLTPYAQRMERVLRENADSLQASLRPHADELKAKIDQNVEELKGRLTPY 122 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHhH
Q ss_pred CCCcCHHHHHHHHHHHHhchhhHHHhhhh-------------hhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHH
Q 004296 646 GDDETANTYASKLEDLKKLVDPIENRYKD-------------GEARAQATRDLLQCIVEYRTAVGSLPPEEQDFIISECY 712 (763)
Q Consensus 646 g~~a~~~~~~~kl~~L~~~~~pi~~R~~e-------------~~~rp~a~~~l~~~l~~~~~~~~~i~~~e~~~v~~~~~ 712 (763)
. +.-...+.+++.+|+....|....+.+ ...-...-+.+...+...+..+..+.++=+..+...++
T Consensus 123 ~-eelr~k~~~~leeLr~~l~P~ae~~~~kl~~~~e~L~~ql~~~a~~L~~~l~~~~eeLr~~L~p~ae~lr~~l~~~~e 201 (273)
T 3s84_A 123 A-DEFKVKIDQTVEELRRSLAPYAQDTQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQRLAPLAEDVRGNLRGNTE 201 (273)
T ss_dssp H-HHHHHHHHHHHHHHHHHHGGGCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCHH
T ss_pred H-HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCceeHHHHHHHHHHHHHHHHhhh
Q 004296 713 KAEQWLREIAQQQDSLPKNTDPILWSGDIKRRTEDLKLKCQHLL 756 (763)
Q Consensus 713 ~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~l~ 756 (763)
++..||.+.. ..|+.++..+.+-+.|..
T Consensus 202 ~l~~~l~~~~----------------~~~~qq~e~f~~~~~p~~ 229 (273)
T 3s84_A 202 GLQKSLAELG----------------GHLDQQVEEFRRRVEPYG 229 (273)
T ss_dssp HHHHHHHHHH----------------HHHHHHHHHHHHHHTTHH
T ss_pred HHHHhHHHHH----------------HHHHHHHHHHHHHhHhhH
No 111
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=60.23 E-value=1.3e+02 Score=29.16 Aligned_cols=142 Identities=15% Similarity=0.130 Sum_probs=67.0
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhh-hhccCCCHHHHHHHHHHHHHHHHHhhcC----------------CCCcCHHHHHHH
Q 004296 595 EQTKDKKNALESYVYEMRNKLFS-TYRSFASDQEREGISRSLQETEEWLYDD----------------GDDETANTYASK 657 (763)
Q Consensus 595 ~~~~~akN~LEs~iy~~r~~l~~-~~~~~~~~~e~~~l~~~l~e~~~WL~~~----------------g~~a~~~~~~~k 657 (763)
..-...-..+|++|......+.. ++ ...+.+..+.+.++....+.=|... ........+..+
T Consensus 17 ~~F~~~~~e~~~Wl~e~e~~l~~~~~-~g~dl~~v~~llkkh~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~r 95 (250)
T 1quu_A 17 EKFRQKASTHETWAYGKEQILLQKDY-ESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDR 95 (250)
T ss_dssp HHHHHHHHHHHHHTTTHHHHHHCCCC-SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHhcCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHH
Confidence 34455566677777777666653 22 0123344433333333332211100 001223345555
Q ss_pred HHHHHhchhhHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcee
Q 004296 658 LEDLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRTAVGSLPPEEQDFIISECYKAEQWLREIAQQQDSLPKNTDPILW 737 (763)
Q Consensus 658 l~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~i~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~ 737 (763)
+.+|....+.+......+..+=...-.+...+... ...+...++++..|+.++...-.......|+- .
T Consensus 96 ~~~l~~~W~~L~~~~~~R~~~L~~~l~~~~~~d~l-----------~~qF~~~a~~~~~Wl~~~e~~l~~~~~~~d~e-~ 163 (250)
T 1quu_A 96 CQKICDQWDRLGTLTQKRREALERMEKLLETIDQL-----------HLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIE-E 163 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHTTTTCCCCCCSTT-T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHhHHHHHHHHHHHHHhccccccCCHH-H
Confidence 55555555555544444443333333333322222 12566788999999999886544433222322 4
Q ss_pred HHHHHHHHHHHH
Q 004296 738 SGDIKRRTEDLK 749 (763)
Q Consensus 738 ~~di~~k~~~l~ 749 (763)
+..+..+.+.+.
T Consensus 164 v~~ll~~h~~~~ 175 (250)
T 1quu_A 164 IQSLITAHEQFK 175 (250)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 444454444444
No 112
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=59.61 E-value=12 Score=43.22 Aligned_cols=64 Identities=16% Similarity=0.085 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhc---CCCCcc---CCCchhHHhcchHHhhhhh
Q 004296 312 EKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLF---GREPRR---SLNASECVARGCALQCAML 380 (763)
Q Consensus 312 ~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~f---g~~~~~---~~n~~eava~Gaa~~a~~~ 380 (763)
+.+...+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.++.. ..-.|.++|+|.|+.|+..
T Consensus 679 ~~L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~ 748 (761)
T 3vth_A 679 NFTYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKI 748 (761)
T ss_dssp HHHHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHH
Confidence 333444444444444 568999999999999999999887 444332 2235899999999988754
No 113
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=59.24 E-value=35 Score=37.45 Aligned_cols=46 Identities=17% Similarity=0.117 Sum_probs=35.1
Q ss_pred CcceEEEEecCCCCHHHHHHHHHHHHHcCCceeeee-cchHHHHHhh
Q 004296 136 PVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLI-HDCTATALGY 181 (763)
Q Consensus 136 ~~~~~VitVP~~~~~~qr~~l~~Aa~~AGl~~~~li-~Ep~Aaal~y 181 (763)
+-..+++.||..++..+-.++.+++...|+++...| ---.++.++.
T Consensus 127 ~~~~~i~~~~~~~df~~~a~~in~~~~~g~~i~~~i~q~dd~vli~n 173 (610)
T 2d0o_A 127 ADAPYILVVSSAFDFADIASVINASLRAGYQITGVILQRDDGVLVSN 173 (610)
T ss_dssp TTSEEEEEECTTSCHHHHHHHHHHHHHTTCEEEEEEESSSCHHHHHH
T ss_pred CCCcEEEEECCcCCHHHHHHHHHHHHHCCCcEEEEEEecCCEEEEcc
Confidence 445699999999999999999999999999876544 3334444443
No 114
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=58.39 E-value=5.8 Score=40.09 Aligned_cols=20 Identities=25% Similarity=0.290 Sum_probs=17.1
Q ss_pred eEEEEEccccceEEEEEeCC
Q 004296 2 SVVGFDIGNENCVIATVKHR 21 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~ 21 (763)
..+|||+|+|.+++++.+++
T Consensus 21 ~~iGIDiGsTt~K~V~~~~~ 40 (287)
T 2ews_A 21 MKVGIDAGGTLIKIVQEQDN 40 (287)
T ss_dssp CEEEEEECSSEEEEEEECSS
T ss_pred eEEEEEEChhhEEEEEEcCC
Confidence 47899999999999988544
No 115
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=57.79 E-value=76 Score=33.96 Aligned_cols=57 Identities=11% Similarity=0.048 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHHHcC---CceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEE
Q 004296 149 TDLQRREYLNAASIAG---LRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVS 212 (763)
Q Consensus 149 ~~~qr~~l~~Aa~~AG---l~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~ 212 (763)
...-.+.+.+|.+.-| ++++.++|+.+|+.++.+... +...+-+=+|-||=-+.+-+
T Consensus 159 G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~-------~~~~iglIlGTGtNa~y~e~ 218 (445)
T 3hm8_A 159 GQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED-------PRCEIGLIVGTGTNACYMEE 218 (445)
T ss_dssp TSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC-------CCceEEEEEeCCceEEEEEe
Confidence 4555778888887753 568899999999998865432 34555555777755544433
No 116
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=56.82 E-value=1e+02 Score=32.13 Aligned_cols=113 Identities=16% Similarity=0.193 Sum_probs=0.0
Q ss_pred EEEEEccccceEEEEEeCCceEEEeCCCCCccceeEEEEcCCceEEcHhHHHhHhhCCcchHHHHHHhhCCCCCCHHHHh
Q 004296 3 VVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQK 82 (763)
Q Consensus 3 vvGID~Gtt~s~va~~~~~~~~ii~n~~~~r~~ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~~ 82 (763)
++|||+|.|++++++++ .+
T Consensus 11 ~lgiDIGgt~i~~~l~d-~G------------------------------------------------------------ 29 (366)
T 3mcp_A 11 VMTLDAGGTNFVFSAIQ-GG------------------------------------------------------------ 29 (366)
T ss_dssp EEEEECSSSEEEEEEEE-TT------------------------------------------------------------
T ss_pred EEEEEECcceEEEEEEE-CC------------------------------------------------------------
Q ss_pred hhhcCCceeeeCCCCCeEEEEEecCce-eeecHHHHHHHHHHHHHH---HHHhhcCCCcceEEEEecC------------
Q 004296 83 DLMVLPFESCESPDGGISIKLKYLGET-HTFCPVQVMGMLFSHLKD---VAEKNLEMPVVDCVIGVPS------------ 146 (763)
Q Consensus 83 ~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~~~l~a~~L~~l~~---~a~~~~~~~~~~~VitVP~------------ 146 (763)
...... ..-++..-...++..+.+ .....+..++..+.|++|.
T Consensus 30 ---------------------~il~~~~~~~~~~~~~~~~l~~i~~~~~~i~~~~~~~i~gIGIavPG~Vd~~~G~i~~~ 88 (366)
T 3mcp_A 30 ---------------------KEIADPVVLPACADCLDKCLGNLVEGFKAIQAGLPEAPVAISFAFPGPADYQAGIIGDL 88 (366)
T ss_dssp ---------------------EECSCCEEEECCTTCHHHHHHHHHHHHHHHHTTCSSCCCEEEEECCSSEETTTTEECCC
T ss_pred ---------------------EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhhcCCeEEEEEecceEeCCCCEEEeC
Q ss_pred ----CCC--HHHHHHHHHHHHHcCCceeeeecchHHHHHhhhccc-------------cCCCCCCcceEEEEEeCCc
Q 004296 147 ----YFT--DLQRREYLNAASIAGLRPLRLIHDCTATALGYGIYK-------------TDFANGGKSYIAFVDIGHS 204 (763)
Q Consensus 147 ----~~~--~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~-------------~~~~~~~~~~vlv~D~Ggg 204 (763)
.|. -.-+..+.+.. |++ +.+.|+..|+|++-.... .. ...++++++-+|.|
T Consensus 89 ~nlp~w~~~~~l~~~L~~~~---g~P-V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~---~~~~~~v~l~lGtG 158 (366)
T 3mcp_A 89 PNFPSFRGGVALGPFLEDIF---GIP-VFINNDGSLFAYGEALTGVLPEINRRLREAGST---KRYKNLLGVTLGTG 158 (366)
T ss_dssp TTCGGGTTCBCHHHHHHHHH---CSC-EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCC---CCCCEEEEEEESSS
T ss_pred CCcccccCCCCHHHHHHHHH---CCC-EEEechhhHHHHHHHHhCCCccccccccccccc---CCCCcEEEEEECCc
No 117
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=55.96 E-value=6.7 Score=43.29 Aligned_cols=21 Identities=5% Similarity=0.063 Sum_probs=17.8
Q ss_pred eEEEEEccccceEEEEEeCCc
Q 004296 2 SVVGFDIGNENCVIATVKHRG 22 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~ 22 (763)
.++|||+|||++++++++..+
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g 25 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEEL 25 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTC
T ss_pred EEEEEEeCCcceEEEEECCCC
Confidence 479999999999999987543
No 118
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=55.05 E-value=7.4 Score=42.94 Aligned_cols=21 Identities=19% Similarity=0.370 Sum_probs=17.8
Q ss_pred eEEEEEccccceEEEEEeCCc
Q 004296 2 SVVGFDIGNENCVIATVKHRG 22 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~ 22 (763)
.++|||+|||++++++++..+
T Consensus 5 ~~lgIDiGtts~K~~l~d~~G 25 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDING 25 (504)
T ss_dssp EEEEEEECSSEEEEEEEETTS
T ss_pred EEEEEEecCCceEEEEEcCCC
Confidence 389999999999999987543
No 119
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=54.44 E-value=6.3 Score=43.40 Aligned_cols=21 Identities=14% Similarity=0.232 Sum_probs=17.7
Q ss_pred eEEEEEccccceEEEEEeCCc
Q 004296 2 SVVGFDIGNENCVIATVKHRG 22 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~ 22 (763)
.++|||+|||++++++++..+
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g 23 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEG 23 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTS
T ss_pred EEEEEeeCCcceEEEEECCCC
Confidence 479999999999999986543
No 120
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=54.02 E-value=7.3 Score=43.29 Aligned_cols=19 Identities=21% Similarity=0.438 Sum_probs=16.6
Q ss_pred EEEEEccccceEEEEEeCC
Q 004296 3 VVGFDIGNENCVIATVKHR 21 (763)
Q Consensus 3 vvGID~Gtt~s~va~~~~~ 21 (763)
++|||+|||++++++++..
T Consensus 6 vlgID~GTss~Ka~l~d~~ 24 (526)
T 3ezw_A 6 IVALDQGTTSSRAVVMDHD 24 (526)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEEccccceeeeEEcCC
Confidence 7999999999999887644
No 121
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=52.77 E-value=7.3 Score=42.94 Aligned_cols=21 Identities=14% Similarity=0.346 Sum_probs=17.8
Q ss_pred eEEEEEccccceEEEEEeCCc
Q 004296 2 SVVGFDIGNENCVIATVKHRG 22 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~ 22 (763)
.++|||+|||++++++++..+
T Consensus 7 ~~lgIDiGtts~k~~l~d~~G 27 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQKG 27 (501)
T ss_dssp EEEEEEECSSEEEEEEECTTS
T ss_pred EEEEEEeCccceEEEEEcCCC
Confidence 489999999999999986543
No 122
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=52.15 E-value=8.9 Score=38.30 Aligned_cols=21 Identities=14% Similarity=0.213 Sum_probs=18.5
Q ss_pred eEEEEEccccceEEEEEeCCc
Q 004296 2 SVVGFDIGNENCVIATVKHRG 22 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~ 22 (763)
.+++||+|+|+++.++++++.
T Consensus 3 MlL~IDIGNT~iK~gl~d~~~ 23 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGDE 23 (266)
T ss_dssp CEEEEEECSSEEEEEEEETTE
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 489999999999999998763
No 123
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=52.10 E-value=7.9 Score=42.82 Aligned_cols=20 Identities=20% Similarity=0.385 Sum_probs=17.4
Q ss_pred eEEEEEccccceEEEEEeCC
Q 004296 2 SVVGFDIGNENCVIATVKHR 21 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~ 21 (763)
.++|||+|||++++++++..
T Consensus 4 ~~lgIDiGtts~k~~l~d~~ 23 (510)
T 2p3r_A 4 YIVALDQGTTSSRAVVMDHD 23 (510)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEcCCcceEEEEECCC
Confidence 48999999999999998644
No 124
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=51.44 E-value=9.8 Score=42.02 Aligned_cols=21 Identities=29% Similarity=0.556 Sum_probs=18.0
Q ss_pred eEEEEEccccceEEEEEeCCc
Q 004296 2 SVVGFDIGNENCVIATVKHRG 22 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~ 22 (763)
.++|||+|||++++++++..+
T Consensus 8 ~~lgIDiGtts~k~~l~d~~G 28 (508)
T 3ifr_A 8 QVIGLDIGTTSTIAILVRLPD 28 (508)
T ss_dssp EEEEEEECSSEEEEEEEETTT
T ss_pred EEEEEEecCcceEEEEECCCC
Confidence 379999999999999987544
No 125
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=51.27 E-value=9.8 Score=42.52 Aligned_cols=21 Identities=19% Similarity=0.446 Sum_probs=17.9
Q ss_pred eEEEEEccccceEEEEEeCCc
Q 004296 2 SVVGFDIGNENCVIATVKHRG 22 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~ 22 (763)
.++|||+|||++++++++..+
T Consensus 6 ~~lgIDiGtts~ka~l~d~~G 26 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFDLQG 26 (554)
T ss_dssp EEEEEEECSSEEEEEEEETTS
T ss_pred EEEEEEECcccEEEEEECCCC
Confidence 489999999999999987543
No 126
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=50.70 E-value=8.5 Score=42.47 Aligned_cols=21 Identities=19% Similarity=0.308 Sum_probs=17.9
Q ss_pred eEEEEEccccceEEEEEeCCc
Q 004296 2 SVVGFDIGNENCVIATVKHRG 22 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~ 22 (763)
.++|||+|||++++++++..+
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G 26 (506)
T 3h3n_X 6 YVMAIDQGTTSSRAIIFDRNG 26 (506)
T ss_dssp EEEEEEECSSEEEEEEEETTS
T ss_pred EEEEEEcCCCceEEEEECCCC
Confidence 489999999999999987543
No 127
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=50.65 E-value=20 Score=38.63 Aligned_cols=44 Identities=23% Similarity=0.352 Sum_probs=26.3
Q ss_pred eeeeecchHHHH-----HhhhccccCCCCCCcceEEEEEeCCceeEEEEEE
Q 004296 167 PLRLIHDCTATA-----LGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVS 212 (763)
Q Consensus 167 ~~~li~Ep~Aaa-----l~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~ 212 (763)
.+++|+-..=+. ++|.+..-. ......+.++|||||+|+++...
T Consensus 151 ~v~iisG~eEg~y~wi~vnyllg~l~--~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 151 GAKIITGQEEGAYGWITINYLLGRFK--TPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTTTC-----CCCCEEEEECSSEEEEEECC
T ss_pred ceEECCchhhhhhhHHHHHhhhcccc--CCCCCceEEEecCCCceEEEecc
Confidence 467776554443 344433211 11235688999999999998654
No 128
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=50.05 E-value=9.8 Score=42.35 Aligned_cols=21 Identities=14% Similarity=0.355 Sum_probs=17.7
Q ss_pred eEEEEEccccceEEEEEeCCc
Q 004296 2 SVVGFDIGNENCVIATVKHRG 22 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~ 22 (763)
.++|||+|||.+++++++..+
T Consensus 11 ~~lgID~GTts~Ka~l~d~~G 31 (538)
T 4bc3_A 11 CCLGWDFSTQQVKVVAVDAEL 31 (538)
T ss_dssp EEEEEEECSSEEEEEEEETTC
T ss_pred EEEEEEEcCcCEEEEEECCCC
Confidence 479999999999999887543
No 129
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=49.60 E-value=9.1 Score=42.13 Aligned_cols=20 Identities=15% Similarity=0.212 Sum_probs=17.4
Q ss_pred eEEEEEccccceEEEEEeCC
Q 004296 2 SVVGFDIGNENCVIATVKHR 21 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~ 21 (763)
.++|||+|||++++++++..
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~ 23 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRE 23 (497)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCCchhEEEEECCC
Confidence 48999999999999988644
No 130
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=49.10 E-value=8.9 Score=42.36 Aligned_cols=20 Identities=25% Similarity=0.390 Sum_probs=17.5
Q ss_pred eEEEEEccccceEEEEEeCC
Q 004296 2 SVVGFDIGNENCVIATVKHR 21 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~ 21 (763)
.++|||+|||++++++++..
T Consensus 6 ~~lgIDiGtts~k~~l~d~~ 25 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRD 25 (511)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEeCCCceEEEEECCC
Confidence 58999999999999988644
No 131
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=48.75 E-value=9.8 Score=42.07 Aligned_cols=21 Identities=24% Similarity=0.561 Sum_probs=18.0
Q ss_pred eEEEEEccccceEEEEEe-CCc
Q 004296 2 SVVGFDIGNENCVIATVK-HRG 22 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~-~~~ 22 (763)
.++|||+|||++++++++ ..+
T Consensus 6 ~~lgIDiGtts~ka~l~d~~~G 27 (515)
T 3i8b_A 6 LVAGVDTSTQSCKVRVTDAETG 27 (515)
T ss_dssp EEEEEEECSSEEEEEEEETTTC
T ss_pred EEEEEEeccccEEEEEEECCCC
Confidence 489999999999999988 443
No 132
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=48.47 E-value=7.7 Score=42.53 Aligned_cols=21 Identities=14% Similarity=0.276 Sum_probs=17.3
Q ss_pred eEEEEEccccceEEEEEeCCc
Q 004296 2 SVVGFDIGNENCVIATVKHRG 22 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~ 22 (763)
.++|||+|||++++++++..+
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~G 27 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLDG 27 (482)
T ss_dssp -CEEEEECSSEEEEEEECTTS
T ss_pred eEEEEEcCCCCeEEEEEECCC
Confidence 479999999999999987443
No 133
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=47.91 E-value=1.2e+02 Score=32.80 Aligned_cols=57 Identities=11% Similarity=0.034 Sum_probs=38.7
Q ss_pred CHHHHHHHHHHHHHcC---CceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEEE
Q 004296 149 TDLQRREYLNAASIAG---LRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVS 212 (763)
Q Consensus 149 ~~~qr~~l~~Aa~~AG---l~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~ 212 (763)
...-.+.|++|.+.-| ++++.++|+.+|..++.+... +...+-+=+|-||=-+.+-+
T Consensus 183 G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~-------~~~~iGlI~GTGtNa~Y~E~ 242 (470)
T 3f9m_A 183 GNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED-------HQCEVGMIVGTGCNACYMEE 242 (470)
T ss_dssp TSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEE
T ss_pred CccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC-------CCceEEEEEecCCceEEeee
Confidence 4556788889988877 468899999999988766432 23444444787765444333
No 134
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=47.86 E-value=7.5 Score=42.69 Aligned_cols=19 Identities=16% Similarity=0.309 Sum_probs=16.7
Q ss_pred eEEEEEccccceEEEEEeC
Q 004296 2 SVVGFDIGNENCVIATVKH 20 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~ 20 (763)
.++|||+|||++++++++.
T Consensus 5 ~~lgiDiGtts~k~~l~d~ 23 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLARY 23 (489)
T ss_dssp EEEEEEECSSEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEEe
Confidence 4799999999999998863
No 135
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=47.23 E-value=11 Score=42.44 Aligned_cols=19 Identities=21% Similarity=0.338 Sum_probs=17.1
Q ss_pred eEEEEEccccceEEEEEeC
Q 004296 2 SVVGFDIGNENCVIATVKH 20 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~ 20 (763)
.+||||+|||++++++++.
T Consensus 6 ~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEecCCcceEEEEEEC
Confidence 4899999999999999875
No 136
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=45.60 E-value=87 Score=25.96 Aligned_cols=44 Identities=9% Similarity=0.192 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHhhcC--------CCCcCHHHHHHHHHHHHhchhhHHH
Q 004296 627 EREGISRSLQETEEWLYDD--------GDDETANTYASKLEDLKKLVDPIEN 670 (763)
Q Consensus 627 e~~~l~~~l~e~~~WL~~~--------g~~a~~~~~~~kl~~L~~~~~pi~~ 670 (763)
+...|...++++..||.+- ....+...++..+...+.+..-|..
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~ 54 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTA 54 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3467788888888888641 1123445555555555555544444
No 137
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=45.54 E-value=13 Score=41.18 Aligned_cols=21 Identities=10% Similarity=0.154 Sum_probs=17.8
Q ss_pred eEEEEEccccceEEEEEeCCc
Q 004296 2 SVVGFDIGNENCVIATVKHRG 22 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~ 22 (763)
.+||||+|||++++++++..+
T Consensus 27 ~~lgIDiGtts~k~~l~d~~G 47 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGNQ 47 (520)
T ss_dssp EEEEEEECSSEEEEEEECTTS
T ss_pred eEEEEEeCCcceEEEEECCCC
Confidence 489999999999999986443
No 138
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=45.28 E-value=11 Score=41.36 Aligned_cols=19 Identities=16% Similarity=0.503 Sum_probs=16.6
Q ss_pred EEEEEccccceEEEEEeCC
Q 004296 3 VVGFDIGNENCVIATVKHR 21 (763)
Q Consensus 3 vvGID~Gtt~s~va~~~~~ 21 (763)
++|||+|||++++++++..
T Consensus 2 ~lgiDiGtt~~k~~l~d~~ 20 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQ 20 (484)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCcccEEEEECCC
Confidence 6899999999999988644
No 139
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=45.25 E-value=42 Score=28.07 Aligned_cols=25 Identities=12% Similarity=0.105 Sum_probs=19.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhc
Q 004296 703 EQDFIISECYKAEQWLREIAQQQDS 727 (763)
Q Consensus 703 e~~~v~~~~~~~~~Wl~~~~~~q~~ 727 (763)
++..+.+.++++..||.++......
T Consensus 3 ~L~~f~~~l~el~~WL~e~e~~l~~ 27 (118)
T 3uul_A 3 DLDSYQIALEEVLTWLLSAEDTFQE 27 (118)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5677888999999999987665554
No 140
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=45.23 E-value=1.5e+02 Score=26.14 Aligned_cols=82 Identities=12% Similarity=0.153 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHHhchhhHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 004296 650 TANTYASKLEDLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRTAVGSLPPEEQDFIISECYKAEQWLREIAQQQDSLP 729 (763)
Q Consensus 650 ~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~i~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~ 729 (763)
+.+.+.+++..|......+..+..++..+=+..-. +..+...+++...|++++...- .-+
T Consensus 13 ~a~~I~~r~~~l~~r~~~L~~~a~~R~~~Le~s~~-------------------l~~F~~d~~el~~Wi~ek~~~~-~~~ 72 (149)
T 3f31_A 13 TAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYR-------------------FQFFQRDAEELEKWIQEKLQIA-SDE 72 (149)
T ss_dssp CTTHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHHHHT-TSC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHHHHH-cCc
Confidence 44567778888777666666655544433222111 2445566777888888877642 334
Q ss_pred CCCCCceeHHHHHHHHHHHHHHH
Q 004296 730 KNTDPILWSGDIKRRTEDLKLKC 752 (763)
Q Consensus 730 ~~~dP~~~~~di~~k~~~l~~~~ 752 (763)
.+.||. .+.....|.+.++..+
T Consensus 73 ~~~d~~-~v~~~l~kH~afe~El 94 (149)
T 3f31_A 73 NYKDPT-NLQGKLQKHQAFEAEV 94 (149)
T ss_dssp SSCSSS-CHHHHHHHHHHHHHHH
T ss_pred ccCCHH-HHHHHHHHHHHHHHHH
Confidence 455542 3333444444444443
No 141
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=43.95 E-value=62 Score=35.13 Aligned_cols=31 Identities=13% Similarity=0.270 Sum_probs=24.4
Q ss_pred CcceEEEEEeCCceeEEEEEEEeCC-eEEEEE
Q 004296 192 GKSYIAFVDIGHSDTQVSIVSFEAG-HMKVLS 222 (763)
Q Consensus 192 ~~~~vlv~D~GggT~dvsv~~~~~~-~~~vl~ 222 (763)
....+|.+|+||.++-+.++.+.++ .+++..
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~ 109 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGNHDFDTTQ 109 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESSSCEEEEE
T ss_pred cceEEEEEEecCCeEEEEEEEECCCCceEEEE
Confidence 3467999999999999999999764 344443
No 142
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=43.59 E-value=25 Score=35.79 Aligned_cols=49 Identities=14% Similarity=0.081 Sum_probs=39.8
Q ss_pred HhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCC
Q 004296 307 ASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGRE 358 (763)
Q Consensus 307 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~ 358 (763)
.+.....+...++++|+++|+++++|+.|+..|++.++ -+.+.+.||.+
T Consensus 213 ~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 261 (317)
T 1hnj_A 213 FKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLGMS 261 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 33455677889999999999999999999999998765 45788888754
No 143
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=43.13 E-value=12 Score=41.19 Aligned_cols=21 Identities=24% Similarity=0.398 Sum_probs=17.7
Q ss_pred eEEEEEccccceEEEEEeCCc
Q 004296 2 SVVGFDIGNENCVIATVKHRG 22 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~ 22 (763)
.++|||+|||++++++++..+
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G 23 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSG 23 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTS
T ss_pred EEEEEecCCcceEEEEECCCC
Confidence 479999999999999886443
No 144
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=41.69 E-value=15 Score=37.75 Aligned_cols=68 Identities=18% Similarity=0.044 Sum_probs=38.8
Q ss_pred cHHHHHHHHhhHHHHH----HHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCc-----c-CCCchhH
Q 004296 299 KREEFEELASGLTEKI----AIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPR-----R-SLNASEC 368 (763)
Q Consensus 299 tr~efe~l~~~~~~~i----~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~-----~-~~n~~ea 368 (763)
+.++.+++.+.+.++. .+-+.+++.+.++ ..|+.+||+ +++-..+.+.+ ++. . +.+.+-+
T Consensus 244 ~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~~-----~~vv~aG~G---~~L~~~la~~~--~~~~~~~~i~~~~s~va 313 (334)
T 3cet_A 244 SEIDAENIAKNYYELWKELILENVENVAEKYGS-----KKVVITGLG---ENILKDALADF--EVISVAERYGKDVSLAT 313 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEESTT---HHHHHHHTTTS--EEEEHHHHHCHHHHHSH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CeEEEeCCc---HHHHHHHHhhC--CeeehhcccCccccccc
Confidence 5666676666555444 4445555555433 379999987 46666655442 211 1 2234556
Q ss_pred HhcchHHh
Q 004296 369 VARGCALQ 376 (763)
Q Consensus 369 va~Gaa~~ 376 (763)
-|+|+|++
T Consensus 314 pA~avA~l 321 (334)
T 3cet_A 314 PSFAVAEL 321 (334)
T ss_dssp HHHHHHHH
T ss_pred CHHHHHHH
Confidence 78888855
No 145
>3l4q_C Phosphatidylinositol 3-kinase regulatory subunit beta; PI3K, phosphoinositide-3-kinase, influenza virus, NS1; 2.30A {Bos taurus} PDB: 2v1y_B
Probab=39.56 E-value=1.7e+02 Score=26.71 Aligned_cols=93 Identities=12% Similarity=0.175 Sum_probs=55.8
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHhchhhHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcC----
Q 004296 623 ASDQEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRTAVGS---- 698 (763)
Q Consensus 623 ~~~~e~~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~---- 698 (763)
+.+...+.+...|.++. ..|.+|..+-..+....-..-.|..-.-.|+++|..++..+...+..
T Consensus 7 ~~~~~ve~v~~~L~e~h------------~qy~~ks~~yd~l~e~y~r~sqEiq~Kr~AieAF~E~ik~FeeQ~~~qer~ 74 (170)
T 3l4q_C 7 VKEDSVEAVGAQLKVYH------------QQYQDKSREYDQLYEEYTRTSQELQMKRTAIEAFNETIKIFEEQGQTQEKS 74 (170)
T ss_dssp -CHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred cccccHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555666666666554 34444555554444444444455566667888888888777764321
Q ss_pred -----------CCcchhhHHHHHHHHHHHHHHHHHHHhhc
Q 004296 699 -----------LPPEEQDFIISECYKAEQWLREIAQQQDS 727 (763)
Q Consensus 699 -----------i~~~e~~~v~~~~~~~~~Wl~~~~~~q~~ 727 (763)
=.+.|+..+..-......||.+.......
T Consensus 75 ~~~~~~~f~~e~~~~E~~~l~~N~e~LksRL~~l~~sk~~ 114 (170)
T 3l4q_C 75 SKEYLERFRREGNEKEMQRILLNSERLKSRIAEIHESRTK 114 (170)
T ss_dssp TTGGGSSSSSCCCSSSTTTTTHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456777777777778887775554444
No 146
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=39.31 E-value=71 Score=24.56 Aligned_cols=46 Identities=22% Similarity=0.250 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhcCchhHHHHHHHhhhhHHHHHHHHHHhhhhhccCCC
Q 004296 578 ALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFAS 624 (763)
Q Consensus 578 ~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~ 624 (763)
..+.++.+++..+|...++++......|+-|-.+|+.|+. |..+++
T Consensus 26 ~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDK-frSVl~ 71 (72)
T 3nmd_A 26 YALQEKIEELRQRDALIDELELELDQKDELIQMLQNELDK-YRSVIR 71 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhccCC
Confidence 4455677788888989999999999999999888888854 555443
No 147
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=39.14 E-value=1.4e+02 Score=31.39 Aligned_cols=43 Identities=19% Similarity=0.264 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecCCC-ChHHHHHHHHhhcC
Q 004296 310 LTEKIAIPCRKALADAGLHVDKIHSVEIVGSGS-RIPAITRLLTSLFG 356 (763)
Q Consensus 310 ~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s-rip~v~~~l~~~fg 356 (763)
+..++.+.|-.... -+ ..+|.|+++||-+ +.+.|++.|.+.++
T Consensus 313 f~yri~k~IGa~aa--~L--ggvDaIVFTgGIGEns~~vR~~i~~~l~ 356 (415)
T 2e1z_A 313 FVHRIARHIAGHAA--SL--HRLDGIIFTGGIGENSVLIRQLVIEHLG 356 (415)
T ss_dssp HHHHHHHHHHHHHT--TC--SSCCEEEEEHHHHHHCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHH--Hh--CCCCEEEECccccccCHHHHHHHHhhHh
Confidence 44444444444332 23 4699999999999 99999999988774
No 148
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=39.05 E-value=2.5e+02 Score=26.44 Aligned_cols=25 Identities=12% Similarity=0.243 Sum_probs=19.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhc
Q 004296 703 EQDFIISECYKAEQWLREIAQQQDS 727 (763)
Q Consensus 703 e~~~v~~~~~~~~~Wl~~~~~~q~~ 727 (763)
....+...+++...|++++...-..
T Consensus 121 ~l~~F~~~~~~~~~Wi~eke~~~~s 145 (224)
T 2iak_A 121 TLHNFVTRATNELIWLNEKEESEVA 145 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5566777888899999998886544
No 149
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=38.84 E-value=96 Score=32.31 Aligned_cols=25 Identities=16% Similarity=0.250 Sum_probs=22.1
Q ss_pred CccEEEEecCCC-ChHHHHHHHHhhc
Q 004296 331 KIHSVEIVGSGS-RIPAITRLLTSLF 355 (763)
Q Consensus 331 ~i~~V~lvGG~s-rip~v~~~l~~~f 355 (763)
.+|.|+++||-+ ..+.+++.+.+.+
T Consensus 313 gvDaIVFTgGIgEns~~iR~~i~~~l 338 (384)
T 3khy_A 313 KLDALVFTGGIGENAANIRKNIISKL 338 (384)
T ss_dssp SCCEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred CCCEEEECCccccCcHHHHHHHHhhc
Confidence 699999999988 7799999998776
No 150
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=38.62 E-value=1.1e+02 Score=32.90 Aligned_cols=53 Identities=13% Similarity=0.021 Sum_probs=33.7
Q ss_pred CcceEEEEEeCCceeEEEEEEEeCCe---EEEEEEeCCCCC---chHHHHHHHHHHHHH
Q 004296 192 GKSYIAFVDIGHSDTQVSIVSFEAGH---MKVLSHAFDSSL---GGRDFDDVLFGYFAA 244 (763)
Q Consensus 192 ~~~~vlv~D~GggT~dvsv~~~~~~~---~~vl~~~~~~~l---GG~~~D~~l~~~l~~ 244 (763)
....++.+|+||.++-+.++...+.. +......-...+ +|..+-..|++.+.+
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~ 117 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAA 117 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHH
Confidence 34568999999999999999987654 222222222233 566665556555543
No 151
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=38.38 E-value=75 Score=34.30 Aligned_cols=52 Identities=19% Similarity=0.380 Sum_probs=33.3
Q ss_pred CcceEEEEEeCCceeEEEEEEEeCC-----eEEEEEEeCCCC----CchHHHHHHHHHHHHHHH
Q 004296 192 GKSYIAFVDIGHSDTQVSIVSFEAG-----HMKVLSHAFDSS----LGGRDFDDVLFGYFAAKF 246 (763)
Q Consensus 192 ~~~~vlv~D~GggT~dvsv~~~~~~-----~~~vl~~~~~~~----lGG~~~D~~l~~~l~~~~ 246 (763)
....+|.+|+||.++-|++|++.++ .+++....+..+ .| . ...|++|+.+.+
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~Ip~~l~~g-t--~~eLFd~IA~~i 135 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTG-T--AEMLFDYISECI 135 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEECCHHHHSS-B--HHHHHHHHHHHH
T ss_pred cceEEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecCChHhccC-C--HHHHHHHHHHHH
Confidence 3467999999999999999999764 355554443322 22 1 245666665543
No 152
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=38.19 E-value=18 Score=35.59 Aligned_cols=21 Identities=19% Similarity=0.300 Sum_probs=18.1
Q ss_pred eEEEEEccccceEEEEEeCCc
Q 004296 2 SVVGFDIGNENCVIATVKHRG 22 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~~ 22 (763)
..++||+|+|+++.++++++.
T Consensus 4 M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp EEEEEEECSSEEEEEEESSSS
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 478999999999999987554
No 153
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=37.56 E-value=33 Score=34.87 Aligned_cols=47 Identities=17% Similarity=0.116 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCC
Q 004296 309 GLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGRE 358 (763)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~ 358 (763)
-....+...++++|+++|+++++|+.|++.|++.++ -+.+.+.||.+
T Consensus 217 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 263 (322)
T 1ub7_A 217 FAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLGLP 263 (322)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 345677888999999999999999999999988664 45678888753
No 154
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=37.25 E-value=21 Score=36.10 Aligned_cols=63 Identities=11% Similarity=0.014 Sum_probs=38.9
Q ss_pred HhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCC--hHHHHHHHHhhcCCCCccCCCchhHHhcchHHhhh
Q 004296 307 ASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSR--IPAITRLLTSLFGREPRRSLNASECVARGCALQCA 378 (763)
Q Consensus 307 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~sr--ip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a~ 378 (763)
+..++++....+-..+...-. . +...|+|.||.+. .|.+.+.+.+.+ .-|+.+.++||+++|.
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i-------~~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL-------VAPQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC-------CCCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc-------cCCCCCHHHHHHHHHh
Confidence 444555555555555554321 2 5678999998764 455666666542 1246778999998874
No 155
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=36.85 E-value=3.3e+02 Score=27.09 Aligned_cols=26 Identities=12% Similarity=0.211 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCC
Q 004296 704 QDFIISECYKAEQWLREIAQQQDSLP 729 (763)
Q Consensus 704 ~~~v~~~~~~~~~Wl~~~~~~q~~~~ 729 (763)
...+...++++..||.+....-...+
T Consensus 221 ~~~F~~~~~~l~~Wl~~~~~~l~~~~ 246 (323)
T 3edv_A 221 KFRFFSMVRDLMLWMEDVIRQIEAQE 246 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 45678889999999999887766533
No 156
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=36.35 E-value=37 Score=34.28 Aligned_cols=47 Identities=19% Similarity=0.252 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCC
Q 004296 309 GLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGRE 358 (763)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~ 358 (763)
.....+...++++|+++|+++++|+.|++.|+++++ -+.+.+.||.+
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg~~ 253 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLNIP 253 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCCC
Confidence 345577788999999999999999999999998765 35677888743
No 157
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=36.24 E-value=73 Score=26.49 Aligned_cols=43 Identities=9% Similarity=0.225 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHhhcC-------C-CCcCHHHHHHHHHHHHhchhhHHH
Q 004296 628 REGISRSLQETEEWLYDD-------G-DDETANTYASKLEDLKKLVDPIEN 670 (763)
Q Consensus 628 ~~~l~~~l~e~~~WL~~~-------g-~~a~~~~~~~kl~~L~~~~~pi~~ 670 (763)
...+...++++..||.+- . ...+...++..+.+.+.+..-|..
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~ 54 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSA 54 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 456777888888888641 1 123455666666666665555544
No 158
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=35.82 E-value=5.2e+02 Score=29.98 Aligned_cols=45 Identities=9% Similarity=0.042 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCceeHHHHHHHHHHHHHH
Q 004296 706 FIISECYKAEQWLREIAQQQDSLPKNTDPILWSGDIKRRTEDLKLK 751 (763)
Q Consensus 706 ~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~ 751 (763)
.+...++++..|+.++...-.....- ...-.+.++..+.+.+...
T Consensus 489 ~f~~~a~~~~~Wl~~~e~~l~~~~~g-~dl~~ve~ll~kh~~~~~~ 533 (863)
T 1sjj_A 489 EYAKRAAPFNNWMEGAMEDLQDTFIV-HTIEEIQGLTTAHEQFKAT 533 (863)
T ss_dssp HHHHHTTTTHHHHHHHHHHHHCCCCC-SSSGGGHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHhh-ccHHHHHHHHHHHHHHHhH
Confidence 44456667889999888766554332 2233355555555444433
No 159
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=35.23 E-value=22 Score=35.66 Aligned_cols=43 Identities=16% Similarity=0.100 Sum_probs=29.9
Q ss_pred cCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEE
Q 004296 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (763)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 211 (763)
.|++ +.+.|+..|+|++....... ... +++++-+|.| +-.+++
T Consensus 96 ~~~p-v~v~NDa~aaa~~e~~~g~~---~~~-~~v~l~~GtG-iG~gii 138 (289)
T 2aa4_A 96 TNLP-TIAINDAQAAAWAEFQALDG---DIT-DMVFITVSTG-VGGGVV 138 (289)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSCT---TCC-CEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechHHHHHHHHHHhCCC---CCc-eEEEEEeCcc-EEEEEE
Confidence 4775 67999999999876443321 223 8889999988 555555
No 160
>2kmf_A Photosystem II 11 kDa protein; PSB27, structure, helical bundle, cyanobacteria, photosynthesis; NMR {Synechocystis SP} PDB: 2knd_A
Probab=34.49 E-value=2.1e+02 Score=24.19 Aligned_cols=87 Identities=10% Similarity=0.090 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHhchhhHHHhhhhh--hHHHHHHHHHHHHHHHHHHHhcC-----CCcc
Q 004296 630 GISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDG--EARAQATRDLLQCIVEYRTAVGS-----LPPE 702 (763)
Q Consensus 630 ~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~--~~rp~a~~~l~~~l~~~~~~~~~-----i~~~ 702 (763)
.-.+.++.+++-|..+.++... .+-.+++++..+-...||.-. -..-.....++.+|+..-.++.+ |+++
T Consensus 19 dT~~Vv~~lr~~l~l~~d~~~~---~~a~~~ar~~ind~vsrYRr~~~v~g~~Sf~tm~tAlNaLAGHY~s~g~~PlPek 95 (115)
T 2kmf_A 19 DTLTVIATLREAIDLPQDAPNR---QEVQDTARGQINDYISRYRRKGDAGGLKSFTTMQTALNSLAGYYTSYGARPIPEK 95 (115)
T ss_dssp HHHHHHHHHHHHHHSCTTCTTH---HHHHHHHHHHHHHHHHHTHHHHCSSSCHHHHHHHHHHHHHHHHHHHHSSCCCCHH
T ss_pred HHHHHHHHHHHHHcCCCCCccH---HHHHHHHHHHHHHHHHHhcCCCCccccchHHHHHHHHHHHHHHHhhcCCCCCCHH
Confidence 3344455555555555445554 445556666666777776633 34445666777777765554443 9999
Q ss_pred hhhHHHHHHHHHHHHHH
Q 004296 703 EQDFIISECYKAEQWLR 719 (763)
Q Consensus 703 e~~~v~~~~~~~~~Wl~ 719 (763)
-++.|...++.++.-|.
T Consensus 96 ~k~Rl~~el~~AE~al~ 112 (115)
T 2kmf_A 96 LKKRLQLEFTQAERSIE 112 (115)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999887764
No 161
>2y6x_A PSB27, photosystem II 11 KD protein; photosynthesis; 1.60A {Thermosynechococcus elongatus}
Probab=34.40 E-value=2.1e+02 Score=24.12 Aligned_cols=90 Identities=12% Similarity=0.066 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHhchhhHHHhhhhh--hHHHHHHHHHHHHHHHHHHHhcC-----CCc
Q 004296 629 EGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDG--EARAQATRDLLQCIVEYRTAVGS-----LPP 701 (763)
Q Consensus 629 ~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~--~~rp~a~~~l~~~l~~~~~~~~~-----i~~ 701 (763)
+.-.+.++.+++-|..+.++....+. ..++++..+-...||.-. -..-.....++.+|+..-.++.+ |++
T Consensus 14 ~dT~~Vv~~lr~~l~l~~d~~~~~~a---~~~ar~~ind~vsrYRr~~~v~g~~Sfttm~tAlNaLAGHY~s~g~~PlPe 90 (113)
T 2y6x_A 14 EDTLALISSLREAIALPENDPNKKAA---QAEARKKLNDFFALYRRDDSLRSLSSFMTMQTALNSLAGHYSSYPNRPLPE 90 (113)
T ss_dssp HHHHHHHHHHHHHHHSCTTCTTHHHH---HHHHHHHHHHHHHHHTTCHHHHTSHHHHHHHHHHHHHHHHHHHCTTSCCCH
T ss_pred HHHHHHHHHHHHHHcCCCCCccHHHH---HHHHHHHHHHHHHHhcCCCCccccchHHHHHHHHHHHHHHHhhcCCCCCCH
Confidence 33445556666666655555555443 466666677777777633 34456667778888866655543 999
Q ss_pred chhhHHHHHHHHHHHHHHHH
Q 004296 702 EEQDFIISECYKAEQWLREI 721 (763)
Q Consensus 702 ~e~~~v~~~~~~~~~Wl~~~ 721 (763)
+-++.|...++.++.-|...
T Consensus 91 k~k~Rl~~el~~AE~al~Rg 110 (113)
T 2y6x_A 91 KLKARLEQEFKQVELALDRE 110 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999998877653
No 162
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=34.34 E-value=3.1e+02 Score=29.25 Aligned_cols=49 Identities=6% Similarity=-0.002 Sum_probs=30.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCceeHHHHHHHHHHHHHHH
Q 004296 703 EQDFIISECYKAEQWLREIAQQQDSLPKNTDPILWSGDIKRRTEDLKLKC 752 (763)
Q Consensus 703 e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 752 (763)
.+..+...+.+...|++++...-....-.+++ ..+.-+..|.+.|+..+
T Consensus 94 ~L~qFl~d~~ee~~Wi~EKe~~~~s~d~gd~l-~dv~~l~~khq~l~~EL 142 (450)
T 3r6n_A 94 QLQNIIQATSREIMWINDCEEEELLYDWSDKN-TNIAQKQEAFSIRMSQL 142 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCSTTC-CCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccCcCh-hhHHHHHHHHHHHHHHH
Confidence 46677788899999999988765554433222 22334455555555443
No 163
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=34.33 E-value=56 Score=27.21 Aligned_cols=25 Identities=12% Similarity=0.147 Sum_probs=19.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhc
Q 004296 703 EQDFIISECYKAEQWLREIAQQQDS 727 (763)
Q Consensus 703 e~~~v~~~~~~~~~Wl~~~~~~q~~ 727 (763)
++..+.+.++++..||.++......
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~~ 27 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQA 27 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4677888999999999887665443
No 164
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=34.10 E-value=2.3e+02 Score=26.44 Aligned_cols=23 Identities=4% Similarity=-0.097 Sum_probs=18.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHh
Q 004296 703 EQDFIISECYKAEQWLREIAQQQ 725 (763)
Q Consensus 703 e~~~v~~~~~~~~~Wl~~~~~~q 725 (763)
++..+...++++..|+.++....
T Consensus 109 ~~~~F~~~~~e~~~Wl~ek~~~l 131 (218)
T 3edu_A 109 DLHRYFYTGAEILGLIDEKHREL 131 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Confidence 46677788999999999977654
No 165
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=33.64 E-value=29 Score=27.86 Aligned_cols=28 Identities=21% Similarity=0.250 Sum_probs=25.8
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCce
Q 004296 140 CVIGVPSYFTDLQRREYLNAASIAGLRP 167 (763)
Q Consensus 140 ~VitVP~~~~~~qr~~l~~Aa~~AGl~~ 167 (763)
-.++.|+.++..+|..+...|+..||..
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 5899999999999999999999999864
No 166
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=33.43 E-value=24 Score=35.51 Aligned_cols=67 Identities=7% Similarity=-0.103 Sum_probs=40.9
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCC-CccEEEEecCCCCh--HHHHHHHHhhcCCCCccCCCchhHHhcchHHhhhh
Q 004296 306 LASGLTEKIAIPCRKALADAGLHVD-KIHSVEIVGSGSRI--PAITRLLTSLFGREPRRSLNASECVARGCALQCAM 379 (763)
Q Consensus 306 l~~~~~~~i~~~i~~~l~~~~~~~~-~i~~V~lvGG~sri--p~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a~~ 379 (763)
.+..++++....+-..+ . +..- +...|+|.||-++. +.+++.+++.. .++ ..|..+...||+.++..
T Consensus 211 ~A~~i~~~~~~~La~~i-~--~~~~~~p~~vvlgGGv~~~~~~~l~~~l~~~~-~~i---~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-V--LRYNRPDLPLHFIGSVAFHYREVLSSVIKKRG-LTL---GSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-T--GGGCCTTSCEEEESHHHHHTHHHHHHHHHHTT-CCE---EEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-h--cccCCCCceEEEECchHHhhHHHHHHHHHHcC-Cee---cccCcCHHHHHHHHHHh
Confidence 34445555555555555 2 2222 56789999998776 66666666543 122 23557889999988854
No 167
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=33.29 E-value=1.2e+02 Score=32.37 Aligned_cols=34 Identities=18% Similarity=0.406 Sum_probs=26.4
Q ss_pred CcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCC
Q 004296 192 GKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFD 226 (763)
Q Consensus 192 ~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~ 226 (763)
....+|.+|+||.++-|.++++.++ +++....+.
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~~~~~ 90 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG-VQITSEIYS 90 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS-EEEEEEEEC
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc-eEEEEEEec
Confidence 3457899999999999999999766 555554443
No 168
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=33.22 E-value=1.1e+02 Score=36.88 Aligned_cols=19 Identities=16% Similarity=0.247 Sum_probs=0.0
Q ss_pred HHhhhhHHHHHHHHHHhhh
Q 004296 599 DKKNALESYVYEMRNKLFS 617 (763)
Q Consensus 599 ~akN~LEs~iy~~r~~l~~ 617 (763)
..+..||.-|-+++.+|++
T Consensus 921 ~~~~~LE~kl~eLq~rL~~ 939 (1080)
T 2dfs_A 921 KLHIGLENKIMQLQRKIDE 939 (1080)
T ss_dssp -------------------
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3456777777777777753
No 169
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=32.98 E-value=1.8e+02 Score=26.41 Aligned_cols=63 Identities=13% Similarity=0.089 Sum_probs=37.3
Q ss_pred CCCCHHHHHHHHHHHHHHhcCchhHHHHHHHhhhhHHHHHHHHHHhhhhhccCCCHHHHHHHHHHHHHHH
Q 004296 570 GGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQETE 639 (763)
Q Consensus 570 ~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~e~~~l~~~l~e~~ 639 (763)
+|++.+-...+.+....+. .+.....++.|..|+-|+-.+|..+.. -.++-|.++.-.+.++.
T Consensus 83 ~P~t~el~~~l~~~~e~Lr--~~L~~d~EelR~~l~p~~~el~~~l~~-----~~EelR~kl~P~~eeL~ 145 (165)
T 1gs9_A 83 TPVAEETRARLSKELQAAQ--ARLGADMEDVRGRLVQYRGEVQAMLGQ-----STEELRVRLASHLRKLR 145 (165)
T ss_dssp CCCCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTSTTC-----CCHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHH
Confidence 4677666666666666553 345555666666666666666666543 34555666665555553
No 170
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=31.97 E-value=32 Score=34.34 Aligned_cols=46 Identities=15% Similarity=0.122 Sum_probs=30.6
Q ss_pred ccEEEEecCCCChHHHHHHHHhhcCC-------CCccCCCchhHHhcchHHhh
Q 004296 332 IHSVEIVGSGSRIPAITRLLTSLFGR-------EPRRSLNASECVARGCALQC 377 (763)
Q Consensus 332 i~~V~lvGG~srip~v~~~l~~~fg~-------~~~~~~n~~eava~Gaa~~a 377 (763)
.+.|+|.||.+..+.+.+.+++.+.. ++....-.+.+.++|||.++
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 46788888877667777777666632 12223345678999999875
No 171
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=31.34 E-value=85 Score=31.72 Aligned_cols=48 Identities=13% Similarity=0.100 Sum_probs=32.7
Q ss_pred CccEEEEecCCCCh-----HHHHHHHHhhcCC-------CCccCCCchhHHhcchHHhhh
Q 004296 331 KIHSVEIVGSGSRI-----PAITRLLTSLFGR-------EPRRSLNASECVARGCALQCA 378 (763)
Q Consensus 331 ~i~~V~lvGG~sri-----p~v~~~l~~~fg~-------~~~~~~n~~eava~Gaa~~a~ 378 (763)
+.+.|+|-||.++. +.+++.+++++.. ++....-.+.+.++|||.++.
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 46788888888765 5677777776631 122223457899999998774
No 172
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=30.75 E-value=51 Score=33.25 Aligned_cols=47 Identities=15% Similarity=0.075 Sum_probs=37.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCC
Q 004296 309 GLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGRE 358 (763)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~ 358 (763)
.....+...++++|+++|++++||+.|++.|++.++ -+.+.+.||.+
T Consensus 209 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 255 (313)
T 1zow_A 209 FAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI---MESARERLGIS 255 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCCC
Confidence 345677888999999999999999999999988654 35567778743
No 173
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=30.63 E-value=53 Score=33.55 Aligned_cols=47 Identities=13% Similarity=0.220 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCC
Q 004296 309 GLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGRE 358 (763)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~ 358 (763)
-....+...++++|+++|+++++|+.|++.+++.++ -+.+.+.||.+
T Consensus 221 ~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 267 (331)
T 2x3e_A 221 QAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQLDLP 267 (331)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 345677788999999999999999999999998765 35577778754
No 174
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=30.28 E-value=31 Score=34.29 Aligned_cols=20 Identities=25% Similarity=0.516 Sum_probs=17.6
Q ss_pred EEEEEccccceEEEEEeCCc
Q 004296 3 VVGFDIGNENCVIATVKHRG 22 (763)
Q Consensus 3 vvGID~Gtt~s~va~~~~~~ 22 (763)
++.||+|+|+++.++++++.
T Consensus 2 lL~IDIGNT~ik~gl~~~~~ 21 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGE 21 (268)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEECcCcEEEEEEECCE
Confidence 57899999999999998664
No 175
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=30.22 E-value=2e+02 Score=25.75 Aligned_cols=26 Identities=4% Similarity=0.128 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHhchhhHHHhhhhhhH
Q 004296 652 NTYASKLEDLKKLVDPIENRYKDGEA 677 (763)
Q Consensus 652 ~~~~~kl~~L~~~~~pi~~R~~e~~~ 677 (763)
+.+.+++..|....+.+..+..++..
T Consensus 25 ~~I~~r~~~l~~rw~~L~~~a~~R~~ 50 (161)
T 3lbx_A 25 EEIQERRQEVLTRYQSFKERVAERGQ 50 (161)
T ss_dssp TTGGGHHHHGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666665555555544444433
No 176
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=30.12 E-value=26 Score=36.91 Aligned_cols=49 Identities=8% Similarity=-0.023 Sum_probs=32.9
Q ss_pred CccEEEEecCCCChHH-HHHHHHhhcCC----CCccCCCchhHHhcchHHhhhh
Q 004296 331 KIHSVEIVGSGSRIPA-ITRLLTSLFGR----EPRRSLNASECVARGCALQCAM 379 (763)
Q Consensus 331 ~i~~V~lvGG~srip~-v~~~l~~~fg~----~~~~~~n~~eava~Gaa~~a~~ 379 (763)
+++.|+|.||.+..+. +.+.|.+.+.. .+......+.+.++||+..+..
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 348 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLRG 348 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHcC
Confidence 5789999999886543 66777766642 2222333446999999987643
No 177
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=29.94 E-value=37 Score=35.66 Aligned_cols=20 Identities=5% Similarity=0.263 Sum_probs=17.8
Q ss_pred eEEEEEccccceEEEEEeCC
Q 004296 2 SVVGFDIGNENCVIATVKHR 21 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~~ 21 (763)
.++|||+|.|++++++++.+
T Consensus 3 ~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred eEEEEECCccceeEEEEecc
Confidence 48999999999999998754
No 178
>2ra1_A Surface layer protein; triple coiled-coil, S-layer protein, protein binding, sugar protein; 2.41A {Geobacillus stearothermophilus}
Probab=29.59 E-value=2.5e+02 Score=29.10 Aligned_cols=115 Identities=14% Similarity=0.138 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHhchhhHHHhhhhhhHHHHHHHHHHHHHHHHHHH-------------
Q 004296 629 EGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRTA------------- 695 (763)
Q Consensus 629 ~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~------------- 695 (763)
.+|..+-.+++.-|.+..-+...+-|-+-.-+|+.-.- |..|.+....|...++.|+.--+..+..
T Consensus 101 ~kl~~~~~eL~~ai~~~dl~~a~~~YHklsyeikk~av-ll~RVYG~stRe~il~~fk~pA~~l~~~~~y~Itv~~~~~~ 179 (412)
T 2ra1_A 101 TKLDKMRQELKAAVDAKDLKKAEELYHKISYELKTRTV-ILDRVYGQSTRELLRSTFKADAQALRDRLIYDITVAMKARE 179 (412)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTH-HHHTSSCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhccHHHHHHHhhhhhHhhhhcEE-EEecccChhHHHHHHHHhhchHHHHHHHhhhHHHHHHHHHH
Confidence 34555555555556443223345556666677776664 9999999999999999998744333321
Q ss_pred -hcCCCcchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCceeHHHHHHHHHHHHHHHHhhh
Q 004296 696 -VGSLPPEEQDFIISECYKAEQWLREIAQQQDSLPKNTDPILWSGDIKRRTEDLKLKCQHLL 756 (763)
Q Consensus 696 -~~~i~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~l~ 756 (763)
...+.+.++.+....+++..+||.. -.|- ..+||..+...........+
T Consensus 180 ~~~a~~~g~l~~a~~~l~~v~~~l~k----------v~d~--FkaeL~~aa~~a~~aYeaa~ 229 (412)
T 2ra1_A 180 AQDAVKAGNLDKAKAALDQVNQYVSK----------VTDA--FKAELQKAAQDAKAAYEAAL 229 (412)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHGGG----------CCST--THHHHHHHHHHHHHHHHHHS
T ss_pred HHHHhccCcHHHHHHHHHHHHHHHHh----------hhHH--HHHHHHHhhhhhhhhhcccc
Confidence 1227777889999999999999854 2233 55788888877766655543
No 179
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=29.02 E-value=1e+02 Score=29.91 Aligned_cols=120 Identities=17% Similarity=0.103 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhc--CchhHHHHHHHhhhhHHHHHHHHHHhhh------hhccCCCHHHHHHHHHHHHHHHHHhhcC
Q 004296 574 KPELALAQETENLLAQ--QDITMEQTKDKKNALESYVYEMRNKLFS------TYRSFASDQEREGISRSLQETEEWLYDD 645 (763)
Q Consensus 574 ~~ei~~~~~~~~~~~~--~D~~~~~~~~akN~LEs~iy~~r~~l~~------~~~~~~~~~e~~~l~~~l~e~~~WL~~~ 645 (763)
...++.++.++.-+.. .++.....++.+..|.-|.-++|+++.. .-.....++-|.++...+.++.+||...
T Consensus 109 ~~~~eelr~~L~P~~eel~~~~~~~~eel~~~L~p~~eelr~kl~~~veelk~~l~P~~ee~r~kl~~~~~el~~~l~p~ 188 (243)
T 2a01_A 109 QEEMELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDELRQRLAARLEALKENGGAR 188 (243)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHCCSCCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcchh
Q ss_pred CCCcCHHHHHHHHHHHHhchhhHHHhhhh-----hhHHHHHHHHHHHHHHHHHH
Q 004296 646 GDDETANTYASKLEDLKKLVDPIENRYKD-----GEARAQATRDLLQCIVEYRT 694 (763)
Q Consensus 646 g~~a~~~~~~~kl~~L~~~~~pi~~R~~e-----~~~rp~a~~~l~~~l~~~~~ 694 (763)
. ..-.+.+....++|+....|....+.+ .+..-..+..+-..+.....
T Consensus 189 ~-~e~~~kl~~~~e~lr~~l~p~~e~lk~~l~p~~e~~~~~l~~~~e~~~~~~~ 241 (243)
T 2a01_A 189 L-AEYHAKATEHLSTLSEKAKPALEDLRQGLLPVLESFKVSFLSALEEYTKKLN 241 (243)
T ss_dssp T-TSSSCCHHHHHHHHHHHHHHHHHHSSSCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhc
No 180
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=28.48 E-value=22 Score=35.71 Aligned_cols=67 Identities=12% Similarity=-0.046 Sum_probs=36.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCCccCCCchhHHhcchHHhhh
Q 004296 308 SGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCA 378 (763)
Q Consensus 308 ~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a~ 378 (763)
..++++....+-..+ ...+ ..+...|+|.||-+.. +.+.|++.+..+......+..+.++||++++.
T Consensus 211 ~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 211 RQLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQTGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp THHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTTTTCCEEEECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhcCCcEEeecCCCHHHHHHHHHH
Confidence 344455544444444 2221 1156778888887765 55566665543111112345678899998764
No 181
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=28.25 E-value=53 Score=33.66 Aligned_cols=46 Identities=24% Similarity=0.282 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCC
Q 004296 310 LTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGRE 358 (763)
Q Consensus 310 ~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~ 358 (763)
....+...++++|+++|+++++|+.|+..|++.++ -+.+.+.||.+
T Consensus 229 ~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 274 (339)
T 1mzj_A 229 AVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRLGVP 274 (339)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHhCCC
Confidence 45677788999999999999999999999988764 35677788743
No 182
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=27.95 E-value=25 Score=39.57 Aligned_cols=48 Identities=27% Similarity=0.322 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCC--CCccEEEEecCCCChHHHHHHHHhhcC
Q 004296 309 GLTEKIAIPCRKALADAGLHV--DKIHSVEIVGSGSRIPAITRLLTSLFG 356 (763)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~--~~i~~V~lvGG~srip~v~~~l~~~fg 356 (763)
||=..|++-|..+......++ +=.+.|++|||+|.+|++.-.|.++++
T Consensus 476 pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri~ 525 (655)
T 4am6_A 476 PLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRIN 525 (655)
T ss_dssp CHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHHH
Confidence 444445555554332212221 124689999999999999999999885
No 183
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=27.03 E-value=4.9e+02 Score=26.07 Aligned_cols=232 Identities=12% Similarity=0.052 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCCCcceEEEEecC------------CCCHHHHHHHHHHHHHcCCceeeeecchHHHHHhhhcc-----
Q 004296 122 FSHLKDVAEKNLEMPVVDCVIGVPS------------YFTDLQRREYLNAASIAGLRPLRLIHDCTATALGYGIY----- 184 (763)
Q Consensus 122 L~~l~~~a~~~~~~~~~~~VitVP~------------~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~----- 184 (763)
+..+........+..+..+.|++|. .|... ++.+.+.. |++.+.+.|+..|+|++-...
T Consensus 52 ~~~~i~~~~~~~~~~i~gigi~~pG~vd~~~~~~~nl~w~~~-~~~l~~~~---~~p~V~v~NDanaaalgE~~~~~~~~ 127 (332)
T 1sz2_A 52 LEAVIRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWAFS-IAEMKKNL---GFSHLEIINDFTAVSMAIPMLKKEHL 127 (332)
T ss_dssp HHHHHHHHHHHSCCCCCEEEEEESSCCCSSEECCSSSCCCEE-HHHHHHHH---TCSEEEEEEHHHHHHHHGGGCCGGGE
T ss_pred HHHHHHHHHHhcCCCccEEEEEEeCceeCCEEeeeCCCCcCC-HHHHHHHh---CCCcEEEEeCHhHHhccccccChhhh
Q ss_pred -------ccCCCCCCcceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCCCCc-hHHHHHHHHHHHHHHHHhhhcccccc
Q 004296 185 -------KTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLG-GRDFDDVLFGYFAAKFKEQYKINVYS 256 (763)
Q Consensus 185 -------~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lG-G~~~D~~l~~~l~~~~~~~~~~~~~~ 256 (763)
. ....+++++-+|.|-=-.-++.-..|..-.-+..|...+. ....+..+..+++..+. .--..-.-
T Consensus 128 ~~~g~g~~-----~~~~~~~~v~~GTGiG~giv~~g~~G~~g~agE~GH~~v~~~~~~~~~l~~~~c~~~g-~gclE~~~ 201 (332)
T 1sz2_A 128 IQFGGAEP-----VEGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEAIILEILRAEIG-HVSAERVL 201 (332)
T ss_dssp EECSSCCC-----CTTCCEEEEEESSSEEEEEEEEETTEEEEEECCGGGSBCCCCSHHHHHHHHHHHHHSS-SCBGGGTS
T ss_pred eecCCCCC-----CCCCcEEEEEcCccceEEEEecCCCCeeeCCCCccccCcCCCChHHHHHHHHHHhccC-Ccchhhhc
Q ss_pred cHHHHHHHHHHHHHHhhhcCCCCceeEEeecccCC-cceEEEecHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccE-
Q 004296 257 NVRACIRLRAACEKLKKVLSANAEAPLNIECLMDE-KDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHS- 334 (763)
Q Consensus 257 ~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~-~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~- 334 (763)
+...+.++..........-........-.+....+ ...- ++-|++.+..+-.-+..++.-. +.+.
T Consensus 202 S~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~a~~G~D~~A----~~~~~~~~~~Lg~~i~~l~~~l---------~P~~g 268 (332)
T 1sz2_A 202 SGPGLVNLYRAIVKADNRLPENLKPKDITERALADSCTDC----RRALSLFCVIMGRFGGNLALNL---------GTFGG 268 (332)
T ss_dssp SHHHHHHHHHHHHHHTTCCCCCCCHHHHHHHHHHTCCHHH----HHHHHHHHHHHHHHHHHHHHHH---------TCTTE
T ss_pred cHHHHHHHHHHHhhccCCCccCCCHHHHHHHHHcCCCHHH----HHHHHHHHHHHHHHHHHHHHHH---------CCCeE
Q ss_pred EEEecCCCCh-------HHHHHHHHh--hc-----CCCCccCCCchhHHhcchHHhh
Q 004296 335 VEIVGSGSRI-------PAITRLLTS--LF-----GREPRRSLNASECVARGCALQC 377 (763)
Q Consensus 335 V~lvGG~sri-------p~v~~~l~~--~f-----g~~~~~~~n~~eava~Gaa~~a 377 (763)
|+|.||-+.. |.+++.+.+ .+ ..++.... .+.+..+||+.++
T Consensus 269 vvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~a~l~GAa~l~ 324 (332)
T 1sz2_A 269 VFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIV-HDNPGLLGSGAHL 324 (332)
T ss_dssp EEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEEC-CSCHHHHHHHHHH
T ss_pred EEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEEE-CCchhHHHHHHHH
No 184
>4ehp_B Catenin alpha-1; adherens junctions, vinculin binding site, vinculin binding helix bundle, cell adhesion; 2.66A {Homo sapiens}
Probab=26.61 E-value=48 Score=27.90 Aligned_cols=78 Identities=15% Similarity=0.205 Sum_probs=47.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcC-CC-cchhhHHHHHHHHHHHHHHHHHHH----hhcCCCCCCCceeHHHHHHHHH
Q 004296 673 KDGEARAQATRDLLQCIVEYRTAVGS-LP-PEEQDFIISECYKAEQWLREIAQQ----QDSLPKNTDPILWSGDIKRRTE 746 (763)
Q Consensus 673 ~e~~~rp~a~~~l~~~l~~~~~~~~~-i~-~~e~~~v~~~~~~~~~Wl~~~~~~----q~~~~~~~dP~~~~~di~~k~~ 746 (763)
.+..-||..-+.|...|..+..++++ .| .+.++.+...|+.+.+=|.+.+.+ |.+...+++--.-+.-+-.|.+
T Consensus 26 ~~~~~r~~Lee~LE~Iisgaa~~aDS~~Tr~e~RerIv~eCnavRqaLQdLlseym~~~g~ke~se~L~~aI~km~~kt~ 105 (111)
T 4ehp_B 26 SEERFRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTR 105 (111)
T ss_dssp HHHSSSCCHHHHHHHHHHHHTCSCCCCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCCCCCHHHHHHHHHHHHHH
T ss_pred cccccchhHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHH
Confidence 45555777767777777776666666 44 456788999988877666555544 5555555433333344445555
Q ss_pred HHHH
Q 004296 747 DLKL 750 (763)
Q Consensus 747 ~l~~ 750 (763)
+|.+
T Consensus 106 dLrR 109 (111)
T 4ehp_B 106 DLRR 109 (111)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4443
No 185
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=26.56 E-value=6e+02 Score=26.98 Aligned_cols=101 Identities=9% Similarity=0.083 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHHhhcC---------CCC-cCHHHHHHHHHHHHhchhhHHHhhhhhhHHHHHHH--------HHHHH
Q 004296 627 EREGISRSLQETEEWLYDD---------GDD-ETANTYASKLEDLKKLVDPIENRYKDGEARAQATR--------DLLQC 688 (763)
Q Consensus 627 e~~~l~~~l~e~~~WL~~~---------g~~-a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~--------~l~~~ 688 (763)
..-.|...+.+.+.||.+- |++ .+.....+|.+.|+.=...-..|+.....+.+.+- ..+..
T Consensus 94 ~L~qFl~d~~ee~~Wi~EKe~~~~s~d~gd~l~dv~~l~~khq~l~~EL~~~e~~i~~v~~~G~~Li~~~Hpas~~I~~r 173 (450)
T 3r6n_A 94 QLQNIIQATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIEAY 173 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCSTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccCcChhhHHHHHHHHHHHHHHHHHchHHHHHHHHHHHHHHHcCCCCchHHHHH
Confidence 3556777777888888652 222 23444555665555444444444444333333221 11111
Q ss_pred HHH-------HHHHhcC----C-CcchhhHHHHHHHHHHHHHHHHHHHhhc
Q 004296 689 IVE-------YRTAVGS----L-PPEEQDFIISECYKAEQWLREIAQQQDS 727 (763)
Q Consensus 689 l~~-------~~~~~~~----i-~~~e~~~v~~~~~~~~~Wl~~~~~~q~~ 727 (763)
+.. ....+.. + ...+...+...++++++||.++...-..
T Consensus 174 ~~~L~~~W~~L~~l~~~R~~~L~~a~~~~QF~~Da~EaesWL~eke~~l~s 224 (450)
T 3r6n_A 174 MDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRK 224 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhcc
Confidence 111 1111100 1 1134556777799999999987665443
No 186
>1d7m_A Cortexillin I; coiled-coil, coiled-coil trigger site, alpha helix, dimeriza contractIle protein; 2.70A {Dictyostelium discoideum} SCOP: h.1.10.1
Probab=26.16 E-value=1.9e+02 Score=22.90 Aligned_cols=57 Identities=19% Similarity=0.276 Sum_probs=34.3
Q ss_pred HHHHHHHHHhhcCCCCcCHHHHHHHHHHHHhchhhHHHhhhhhhHHHHHHHHHHHHHHHHHH
Q 004296 633 RSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRT 694 (763)
Q Consensus 633 ~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~ 694 (763)
+.|.-++.-|.. +..+.+++.++.++|.+....+.. +...|..-+..++..|..+..
T Consensus 4 n~La~le~sLe~--EK~S~eeL~kQk~eL~~~l~~l~~---e~~~R~~~i~el~akidd~Lk 60 (101)
T 1d7m_A 4 NRLAGLENSLES--EKVSREQLIKQKDQLNSLLASLES---EGAEREKRLRELEAKLDETLK 60 (101)
T ss_dssp HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh--hhccHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 344445555543 355666777777777777766654 455566666666666665444
No 187
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=26.06 E-value=4.9e+02 Score=25.73 Aligned_cols=22 Identities=5% Similarity=0.022 Sum_probs=17.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHH
Q 004296 703 EQDFIISECYKAEQWLREIAQQ 724 (763)
Q Consensus 703 e~~~v~~~~~~~~~Wl~~~~~~ 724 (763)
++..+...++++..|+.++...
T Consensus 114 ~~~~f~~~~~e~~~Wl~~k~~~ 135 (323)
T 3edv_A 114 ELHKFYHDAKEIFGRIQDKHKK 135 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 3556778899999999997654
No 188
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=26.04 E-value=24 Score=35.43 Aligned_cols=61 Identities=8% Similarity=-0.067 Sum_probs=35.7
Q ss_pred CcceEEEEecCCCCHHHHHHHHHHHH-HcCC-ceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCcee
Q 004296 136 PVVDCVIGVPSYFTDLQRREYLNAAS-IAGL-RPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDT 206 (763)
Q Consensus 136 ~~~~~VitVP~~~~~~qr~~l~~Aa~-~AGl-~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~ 206 (763)
.+..+.|++|..- ......+++..+ ..++ ..+.+.|+..||+++-. . ....+++=+|-|.-
T Consensus 59 ~i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~--g-------~~~~v~v~~GTGig 121 (291)
T 1zbs_A 59 SIRAVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC--G-------DSEGIACILGTGSN 121 (291)
T ss_dssp TCCEEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT--T-------TSCEEEEEESSSEE
T ss_pred cccEEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc--C-------CCCcEEEEecCChh
Confidence 3556888888864 222223444443 3454 36789999999998631 1 12344444777753
No 189
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=25.41 E-value=2.7e+02 Score=31.15 Aligned_cols=96 Identities=15% Similarity=0.276 Sum_probs=61.7
Q ss_pred cceEEEEEeCCceeEEEEEEEeCCeEEEEEEeCCC--CCchHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHH
Q 004296 193 KSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDS--SLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEK 270 (763)
Q Consensus 193 ~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~--~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~ 270 (763)
..+-+-+|+|..|+-+.++.+..|.+--.+...+. .+|.+-+++.-+ +.+
T Consensus 205 ~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~---------------------------a~~- 256 (631)
T 3zyy_X 205 RVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIY---------------------------VDE- 256 (631)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHH---------------------------HHH-
T ss_pred CceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHH---------------------------Hhc-
Confidence 45668999999999999998887754333333233 244443333221 100
Q ss_pred HhhhcCCCCceeEEeecccCCcceEEEecHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCh
Q 004296 271 LKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRI 344 (763)
Q Consensus 271 ~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~sri 344 (763)
+.+-++.+-+-+++.+..++.+++.+++++.++|..++++|-.+..
T Consensus 257 ----------------------------~~~g~~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~ 302 (631)
T 3zyy_X 257 ----------------------------NPDGAEKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMT 302 (631)
T ss_dssp ----------------------------CTTHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHH
T ss_pred ----------------------------CcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHH
Confidence 0011233444466778888899999999999999999999975443
No 190
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=24.98 E-value=76 Score=32.40 Aligned_cols=50 Identities=16% Similarity=0.077 Sum_probs=39.9
Q ss_pred HhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCC
Q 004296 307 ASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREP 359 (763)
Q Consensus 307 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~ 359 (763)
++.....+...++++|+++|++.++|+.+++..++.+ +-+.+.+.+|.+.
T Consensus 229 ~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~---i~~~~~~~lgl~~ 278 (333)
T 4dfe_A 229 FKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIR---IMQSTCRKLGLPQ 278 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHTTCCG
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHhCCCH
Confidence 3455677788899999999999999999999988765 4577777887543
No 191
>1ywm_A C protein alpha-antigen; beta sandwich, fibronectin fold, antiparallel three-helix BU surface active protein; 1.86A {Streptococcus agalactiae} PDB: 2o0i_1
Probab=24.90 E-value=2e+02 Score=25.84 Aligned_cols=56 Identities=18% Similarity=0.176 Sum_probs=36.1
Q ss_pred HHHHHHHHHhcC--CCcchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCceeHHHHHHHHHHHHHHHHhh
Q 004296 687 QCIVEYRTAVGS--LPPEEQDFIISECYKAEQWLREIAQQQDSLPKNTDPILWSGDIKRRTEDLKLKCQHL 755 (763)
Q Consensus 687 ~~l~~~~~~~~~--i~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~l 755 (763)
..|+.+.+.++. |++.-+++|...++....=+++ .|+++ .||..|+-++..+-+.|
T Consensus 128 ~kIdeV~kka~Dpkws~~srdeVl~~ld~Ik~DIDn-------nPKtq------~dI~nkI~eV~elEK~L 185 (200)
T 1ywm_A 128 DKIEEVRTNANDPKWTEESRTEVLTGLDTIKTDIDN-------NPKTQ------TDIDSKIVEVNELEKLL 185 (200)
T ss_dssp HHHHHHHHHHTSTTBCHHHHHHHHHHHHHHHHHHHH-------SCCCH------HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcccCCCCCcccHHHHHHHHHHHhhhhcc-------CCccc------cchHHHhhhhhhhhhcc
Confidence 334444444444 7777788888887766655554 45554 78888888877665544
No 192
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=24.40 E-value=40 Score=34.67 Aligned_cols=44 Identities=16% Similarity=0.133 Sum_probs=29.7
Q ss_pred cCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEE
Q 004296 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (763)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 211 (763)
.|++ +.+.|+..|+|++....... ....+++++-+|.| +-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~---~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQG---KGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTT---TTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCC---CCCCcEEEEEECCC-EEEEEE
Confidence 3776 67999999999875443211 23457888888887 455554
No 193
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=24.39 E-value=4.2e+02 Score=24.38 Aligned_cols=48 Identities=10% Similarity=0.183 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCceeHHHHHHHHHHHHHHH
Q 004296 704 QDFIISECYKAEQWLREIAQQQDSLPKNTDPILWSGDIKRRTEDLKLKC 752 (763)
Q Consensus 704 ~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 752 (763)
...+...+++...|+.++...-...+ +-+-+-.+..+..|.+.|+..+
T Consensus 111 l~qf~~~~~~~~~Wl~e~e~~~~~~~-~g~dl~~v~~ll~kh~~~~~el 158 (216)
T 1u5p_A 111 LHQFFRDMDDEESWIKEKKLLVSSED-YGRDLTGVQNLRKKHKRLEAEL 158 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCC-CCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHhcCcc-cCCCHHHHHHHHHHHHHHHHHH
Confidence 34567778999999999876443322 2223344445555555554443
No 194
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=24.29 E-value=2e+02 Score=27.92 Aligned_cols=46 Identities=13% Similarity=0.180 Sum_probs=24.8
Q ss_pred ecHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCh
Q 004296 298 IKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRI 344 (763)
Q Consensus 298 itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~sri 344 (763)
+-+..-+.+-.-++.-....|+..+++..-...+ -.|+++||.+.+
T Consensus 178 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~~~-~~vi~TGG~a~~ 223 (249)
T 3bex_A 178 VGKDTEENIRLGVVNGSVYALEGIIGRIKEVYGD-LPVVLTGGQSKI 223 (249)
T ss_dssp SBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEEESTTSGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CEEEEECCChHH
Confidence 4455556665555555555555444432100012 359999998865
No 195
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=24.09 E-value=1.1e+02 Score=30.72 Aligned_cols=48 Identities=8% Similarity=-0.043 Sum_probs=30.7
Q ss_pred CccEEEEecCCCCh----HHHHHHHHhhcC----C---------CCccCCCchhHHhcchHHhhh
Q 004296 331 KIHSVEIVGSGSRI----PAITRLLTSLFG----R---------EPRRSLNASECVARGCALQCA 378 (763)
Q Consensus 331 ~i~~V~lvGG~sri----p~v~~~l~~~fg----~---------~~~~~~n~~eava~Gaa~~a~ 378 (763)
+++.|+|-||.++. +.+++.+.+... . .+....-.+.|.++|||.++.
T Consensus 224 dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~ 288 (302)
T 3epq_A 224 APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAH 288 (302)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHH
T ss_pred CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHH
Confidence 46778888887764 455566655542 1 122233457799999998764
No 196
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=24.02 E-value=76 Score=32.28 Aligned_cols=46 Identities=26% Similarity=0.227 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCC
Q 004296 309 GLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGR 357 (763)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~ 357 (763)
.....+...++++|+++|++++||+.+++-++++++ -+.+.+.||.
T Consensus 229 ~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~---~~~~~~~lg~ 274 (335)
T 1u6e_A 229 WAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRI---NELLVKNLQL 274 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHcCC
Confidence 345677888999999999999999999999988765 3446677774
No 197
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=23.98 E-value=53 Score=32.65 Aligned_cols=21 Identities=14% Similarity=0.202 Sum_probs=17.8
Q ss_pred eEEEEEccccceEEEEEe-CCc
Q 004296 2 SVVGFDIGNENCVIATVK-HRG 22 (763)
Q Consensus 2 ~vvGID~Gtt~s~va~~~-~~~ 22 (763)
..+.||.|+|+++.++++ ++.
T Consensus 24 M~L~IDiGNT~ik~g~~~~~~~ 45 (271)
T 2f9w_A 24 MILELDCGNSLIKWRVIEGAAR 45 (271)
T ss_dssp EEEEEEECSSCEEEEEEETTTE
T ss_pred cEEEEEeCCCeeEEEEEeCCCE
Confidence 368999999999999998 443
No 198
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=23.50 E-value=1.1e+02 Score=32.43 Aligned_cols=72 Identities=22% Similarity=0.275 Sum_probs=49.1
Q ss_pred cceEEEEecCCCCHHHHHHHHHHHHHcCCceeeeecchHH-HHHhhhcccc---CCCCCCc--------------ceEEE
Q 004296 137 VVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTA-TALGYGIYKT---DFANGGK--------------SYIAF 198 (763)
Q Consensus 137 ~~~~VitVP~~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~A-aal~y~~~~~---~~~~~~~--------------~~vlv 198 (763)
+.++|+..|+.-+ -.++-||.++|.+.+.-+--.-| ||++||...- +.....+ ...+=
T Consensus 154 V~~Iv~~tPp~i~----p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G~Vg 229 (434)
T 1kae_A 154 CKKVVLCSPPPIA----DEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAA 229 (434)
T ss_dssp CSEEEEEECSSCC----HHHHHHHHHTTCCEEEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTTSCE
T ss_pred CCeEEEECCCCCC----HHHHHHHHHcCCCEEeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcCccc
Confidence 7789999998322 46889999999999888888777 5689996421 1000000 11244
Q ss_pred EEeCCceeEEEEEE
Q 004296 199 VDIGHSDTQVSIVS 212 (763)
Q Consensus 199 ~D~GggT~dvsv~~ 212 (763)
+||=+|-+++.|+.
T Consensus 230 IDm~AGPSEilViA 243 (434)
T 1kae_A 230 IDMPAGPSEVLVIA 243 (434)
T ss_dssp ESCCCCCCEEEEEE
T ss_pred cCCCCCCceEEEEe
Confidence 88888888887764
No 199
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=23.19 E-value=1.2e+02 Score=34.04 Aligned_cols=57 Identities=23% Similarity=0.236 Sum_probs=43.9
Q ss_pred EEEecHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHH
Q 004296 295 RGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLT 352 (763)
Q Consensus 295 ~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~ 352 (763)
.+.||..+++++.. --..|..-++-.|+++|++.++|+.|+|.||++.-=-+.+++.
T Consensus 499 ~i~itq~DIr~~ql-AKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 499 DIVITEADIQNLIR-AKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp CEEEEHHHHHHHHH-HHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred cEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 46899999987633 2334556677788899999999999999999988666666553
No 200
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=23.18 E-value=4.3e+02 Score=24.13 Aligned_cols=47 Identities=13% Similarity=0.219 Sum_probs=26.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCceeHHHHHHHHHHHHHH
Q 004296 704 QDFIISECYKAEQWLREIAQQQDSLPKNTDPILWSGDIKRRTEDLKLK 751 (763)
Q Consensus 704 ~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~ 751 (763)
...+...++++..||.++...-.. +.+-+..-.+..+..+.+.++..
T Consensus 108 ~~~f~~~~~e~~~Wl~~~e~~l~~-~~~g~~~~~v~~ll~~h~~~~~e 154 (213)
T 1cun_A 108 YQQFVANVEEEEAWINEKMTLVAS-EDYGDTLAAIQGLLKKHEAFETD 154 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC-CCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 345667788899999997664433 22223333344444444444443
No 201
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=22.90 E-value=2.2e+02 Score=26.49 Aligned_cols=23 Identities=22% Similarity=0.088 Sum_probs=14.4
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhh
Q 004296 594 MEQTKDKKNALESYVYEMRNKLF 616 (763)
Q Consensus 594 ~~~~~~akN~LEs~iy~~r~~l~ 616 (763)
....++.|..|+-|.-++|.++.
T Consensus 105 ~kdlEelr~kL~P~~eEL~~~l~ 127 (191)
T 1nfn_A 105 GADMEDVCGRLVQYRGEVQAMLG 127 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHH
Confidence 45556666666666666666664
No 202
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=22.48 E-value=68 Score=33.93 Aligned_cols=47 Identities=13% Similarity=0.127 Sum_probs=30.7
Q ss_pred HhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCC-ChHHHHHHHHhhcC
Q 004296 307 ASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGS-RIPAITRLLTSLFG 356 (763)
Q Consensus 307 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s-rip~v~~~l~~~fg 356 (763)
++-+..++.+.|-..... +. ..+|.|+++||-+ ..+.||+.+.+.++
T Consensus 318 ~d~f~yri~k~IGa~aa~--L~-G~vDaIVFTgGIGEns~~vR~~v~~~l~ 365 (415)
T 3sk3_A 318 MDVYCHRLAKYIGSYTAL--MD-GRLDAVVFTGGIGENAAMVRELSLGKLG 365 (415)
T ss_dssp HHHHHHHHHHHHHHGGGG--ST-TCCCEEEEEHHHHTTCHHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHHHHHHH--hC-CCCCEEEECCccccCCHHHHHHHHhhch
Confidence 334445555544433322 21 2589999999987 79999999987763
No 203
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=22.40 E-value=5.7e+02 Score=25.22 Aligned_cols=46 Identities=15% Similarity=0.104 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCCCCceeHHHHHHHHHHHHHH
Q 004296 705 DFIISECYKAEQWLREIAQQQDSLPKNTDPILWSGDIKRRTEDLKLK 751 (763)
Q Consensus 705 ~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~ 751 (763)
..+...+.+...|+.++...-...+... .+-.+..+..+.+.+.+.
T Consensus 113 ~~f~~~~~~l~~Wl~~~e~~l~~~~~g~-d~~~v~~l~~~~~~f~~e 158 (326)
T 3kbt_A 113 FQLKRETDDLEQWISEKELVASSPEMGQ-DFDHVTLLRDKFRDFARE 158 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCCCS-SHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccCCC-CHHHHHHHHHHHHHHHHH
Confidence 4456777888999999776544433222 233334444444444443
No 204
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=22.03 E-value=67 Score=33.75 Aligned_cols=48 Identities=21% Similarity=0.227 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCC
Q 004296 309 GLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREP 359 (763)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~ 359 (763)
...+.+...++++|+++|++++||+.+++.+++.++ -+.+.+.+|.+.
T Consensus 284 ~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i---~d~~~~~lgl~~ 331 (393)
T 1ted_A 284 YIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKI---IEQSVRSLGISA 331 (393)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHH---HHHHHHHHTCCG
T ss_pred HHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHH---HHHHHHHcCCCH
Confidence 345677788999999999999999999999888664 456777777543
No 205
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=21.83 E-value=2.4e+02 Score=30.24 Aligned_cols=23 Identities=22% Similarity=0.362 Sum_probs=20.7
Q ss_pred cceEEEEEeCCceeEEEEEEEeC
Q 004296 193 KSYIAFVDIGHSDTQVSIVSFEA 215 (763)
Q Consensus 193 ~~~vlv~D~GggT~dvsv~~~~~ 215 (763)
...++.+|+||.++-+.++.+.+
T Consensus 67 ~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 67 TGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CEEEEEEEESSSSEEEEEEEECC
T ss_pred cceEEEEEeCCCeEEEEEEecCC
Confidence 46789999999999999999976
No 206
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=21.51 E-value=1e+02 Score=31.64 Aligned_cols=51 Identities=18% Similarity=0.116 Sum_probs=40.3
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhhcCCCC
Q 004296 306 LASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREP 359 (763)
Q Consensus 306 l~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~srip~v~~~l~~~fg~~~ 359 (763)
+.+..+..+...++++|+++|++.++|+.+++..++.+ +.+.+.+.+|.+.
T Consensus 240 v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~---i~~~~~~~lgl~~ 290 (345)
T 3s21_A 240 LLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRP---HTAAFVKSFGIDP 290 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHH---HHHHHHHHHTCCG
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHH---HHHHHHHHcCcCH
Confidence 44445667778889999999999999999999988755 4577777787543
No 207
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=21.39 E-value=57 Score=33.06 Aligned_cols=43 Identities=5% Similarity=-0.043 Sum_probs=27.1
Q ss_pred cCCceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCceeEEEEE
Q 004296 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (763)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 211 (763)
.|++ +.+.|+..|+|++...... ....+++++-+|.| .-..++
T Consensus 107 ~~~p-v~v~NDanaaa~~e~~~~~----~~~~~~~~v~~GtG-iG~gii 149 (310)
T 3htv_A 107 LNCP-VEFSRDVNLQLSWDVVENR----LTQQLVLAAYLGTG-MGFAVW 149 (310)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHTT----CTTSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEeeHHHHHHHHHHhhcc----cCCceEEEEEecee-EEEEEE
Confidence 4776 6799999999875432221 12456777888865 444444
No 208
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=21.16 E-value=12 Score=37.93 Aligned_cols=59 Identities=10% Similarity=-0.067 Sum_probs=32.0
Q ss_pred cceEEEEecCCCCHHHHHHHHHHHH-HcCC-ceeeeecchHHHHHhhhccccCCCCCCcceEEEEEeCCce
Q 004296 137 VVDCVIGVPSYFTDLQRREYLNAAS-IAGL-RPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSD 205 (763)
Q Consensus 137 ~~~~VitVP~~~~~~qr~~l~~Aa~-~AGl-~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT 205 (763)
+..+.|++|..- ......+++..+ ..++ ..+.+.|+..||+++-. . ....+++=+|-|.
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~--g-------~~~~v~v~~GTGi 118 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC--G-------QKAGIACILGTGS 118 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT--T-------TSCBEEEEESSSE
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc--C-------CCCcEEEEeCCCh
Confidence 345778888753 221123444333 3464 35789999999998542 1 1223444478776
No 209
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=21.14 E-value=7.3e+02 Score=27.07 Aligned_cols=28 Identities=4% Similarity=-0.089 Sum_probs=13.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 004296 703 EQDFIISECYKAEQWLREIAQQQDSLPK 730 (763)
Q Consensus 703 e~~~v~~~~~~~~~Wl~~~~~~q~~~~~ 730 (763)
.++.+...-++...|-.+..+.+++++.
T Consensus 556 ~~~~~~~l~~e~~~~~~~~~~l~~~~~~ 583 (597)
T 3oja_B 556 KRAKQAELRQETSLKRQKVKQLEAKKNR 583 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3444444445555555555555555443
No 210
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=21.07 E-value=54 Score=34.19 Aligned_cols=20 Identities=15% Similarity=0.144 Sum_probs=17.4
Q ss_pred CeEEEEEccccceEEEEEeC
Q 004296 1 MSVVGFDIGNENCVIATVKH 20 (763)
Q Consensus 1 m~vvGID~Gtt~s~va~~~~ 20 (763)
|.+||||+|.|++++++++.
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEE
T ss_pred CeEEEEEEccccEEEEEEec
Confidence 35899999999999999864
No 211
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=20.98 E-value=3.9e+02 Score=24.43 Aligned_cols=46 Identities=13% Similarity=0.182 Sum_probs=31.9
Q ss_pred CCCCHHHHHHHHHHHHHHhcCchhHHHHHHHhhhhHHHHHHHHHHhhh
Q 004296 570 GGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFS 617 (763)
Q Consensus 570 ~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~ 617 (763)
+|++.+-...+......+ ..+.....++.|..|+-|+-.++.++..
T Consensus 66 ~p~~~e~~~~l~~~~~~L--r~~l~kdlee~r~~l~P~~~e~~~~~~~ 111 (185)
T 3r2p_A 66 GPVTQEFWDNLEKETEGL--RQEMSKDLEEVKAKVQPYLDDFQKKWQE 111 (185)
T ss_dssp CSCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHH--HHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 467777666666655554 3345667788888888888888877753
No 212
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=20.28 E-value=1.1e+02 Score=32.26 Aligned_cols=75 Identities=24% Similarity=0.263 Sum_probs=49.7
Q ss_pred cceEEEEecCCCCHHHHHHHHHHHHHcCCceeeeecchHH-HHHhhhcccc---CCCCCC-cc----------eEEEEEe
Q 004296 137 VVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTA-TALGYGIYKT---DFANGG-KS----------YIAFVDI 201 (763)
Q Consensus 137 ~~~~VitVP~~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~A-aal~y~~~~~---~~~~~~-~~----------~vlv~D~ 201 (763)
+.++|++.|+. ...---.++-||.++|.+.+.-+--.-| ||++||...- +..... +. ..+-+|+
T Consensus 160 V~~Iv~~tPp~-~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g~VgIDm 238 (423)
T 4gic_A 160 VPELIMAVPAP-RGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFGQVGIDM 238 (423)
T ss_dssp CSEEEEECCCG-GGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBTTBEECC
T ss_pred CCeEEEecCCC-CCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcCCcCccc
Confidence 67899999983 2222356889999999998888877777 5688986531 100001 10 1256788
Q ss_pred CCceeEEEEEE
Q 004296 202 GHSDTQVSIVS 212 (763)
Q Consensus 202 GggT~dvsv~~ 212 (763)
=+|-+++.|+.
T Consensus 239 ~AGPSEilViA 249 (423)
T 4gic_A 239 VAGPSEILVIS 249 (423)
T ss_dssp CCCCCEEEEEE
T ss_pred ccccceEEEEe
Confidence 88888887764
Done!