Query 004297
Match_columns 763
No_of_seqs 468 out of 3226
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 20:41:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004297.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004297hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 3.7E-32 1.3E-36 284.6 29.1 229 200-475 19-272 (284)
2 2r83_A Synaptotagmin-1; C2A-C2 100.0 3E-32 1E-36 285.2 28.4 243 25-309 8-273 (284)
3 1dqv_A Synaptotagmin III; beta 100.0 4.3E-32 1.5E-36 285.2 18.3 229 200-475 20-275 (296)
4 1dqv_A Synaptotagmin III; beta 100.0 1.4E-31 4.8E-36 281.3 20.3 245 26-309 8-276 (296)
5 2ep6_A MCTP2 protein; beta san 99.8 7.3E-21 2.5E-25 174.5 12.5 124 358-495 9-132 (133)
6 2dmh_A Myoferlin; beta-sandwic 99.8 1.2E-19 4E-24 168.1 16.6 125 360-496 5-134 (140)
7 1wfj_A Putative elicitor-respo 99.8 6.2E-20 2.1E-24 169.0 13.1 123 359-496 7-131 (136)
8 2fk9_A Protein kinase C, ETA t 99.8 5.5E-20 1.9E-24 171.5 12.8 119 359-494 26-156 (157)
9 3kwu_A MUNC13-1; calcium bindi 99.8 2.6E-19 8.9E-24 167.4 17.3 128 361-494 16-146 (148)
10 2ep6_A MCTP2 protein; beta san 99.8 1.6E-19 5.4E-24 165.6 13.2 125 30-162 5-131 (133)
11 3b7y_A E3 ubiquitin-protein li 99.8 2.3E-19 8E-24 168.7 14.3 124 359-494 17-152 (153)
12 2dmh_A Myoferlin; beta-sandwic 99.8 7E-19 2.4E-23 162.8 16.9 123 36-164 5-134 (140)
13 3m7f_B E3 ubiquitin-protein li 99.8 8E-19 2.7E-23 169.1 15.1 126 359-496 5-142 (176)
14 1rlw_A Phospholipase A2, CALB 99.8 4.3E-19 1.5E-23 161.0 11.5 118 361-493 2-123 (126)
15 3b7y_A E3 ubiquitin-protein li 99.8 3.1E-18 1E-22 161.1 17.1 129 34-163 16-153 (153)
16 1gmi_A Protein kinase C, epsil 99.8 6.6E-19 2.2E-23 162.0 12.2 119 361-496 5-134 (136)
17 1wfj_A Putative elicitor-respo 99.8 5.5E-19 1.9E-23 162.6 11.4 124 35-165 7-132 (136)
18 3kwu_A MUNC13-1; calcium bindi 99.8 5.5E-18 1.9E-22 158.3 17.2 119 36-162 15-146 (148)
19 3m7f_B E3 ubiquitin-protein li 99.8 5.7E-18 1.9E-22 163.1 17.2 129 35-164 5-142 (176)
20 2d8k_A Synaptotagmin VII; exoc 99.8 1E-17 3.5E-22 155.1 16.5 120 321-476 10-136 (141)
21 2fk9_A Protein kinase C, ETA t 99.8 3.3E-18 1.1E-22 159.4 12.8 121 197-334 26-157 (157)
22 1rsy_A Synaptotagmin I; calciu 99.8 4.4E-18 1.5E-22 159.7 13.5 119 321-475 26-150 (152)
23 3fdw_A Synaptotagmin-like prot 99.8 1.5E-18 5E-23 162.2 9.4 122 321-477 7-136 (148)
24 2z0u_A WW domain-containing pr 99.8 2.8E-18 9.5E-23 160.8 10.9 117 322-474 28-154 (155)
25 2b3r_A Phosphatidylinositol-4- 99.7 1.1E-17 3.9E-22 153.1 14.5 116 23-146 7-131 (134)
26 3pyc_A E3 ubiquitin-protein li 99.7 7.9E-18 2.7E-22 154.0 13.3 123 362-493 5-131 (132)
27 1rlw_A Phospholipase A2, CALB 99.7 8.6E-18 2.9E-22 152.4 12.8 115 37-160 2-122 (126)
28 2bwq_A Regulating synaptic mem 99.7 7E-18 2.4E-22 153.7 12.2 115 322-473 3-128 (129)
29 3f04_A Synaptotagmin-1; C2A, c 99.7 6.4E-18 2.2E-22 156.9 12.0 119 321-475 18-142 (143)
30 2z0u_A WW domain-containing pr 99.7 3.9E-18 1.3E-22 159.8 9.8 116 26-145 31-155 (155)
31 2nq3_A Itchy homolog E3 ubiqui 99.7 1.8E-17 6.2E-22 158.2 14.0 123 360-495 34-161 (173)
32 1v27_A Regulating synaptic mem 99.7 1.3E-17 4.5E-22 154.4 12.5 119 321-476 5-134 (141)
33 2bwq_A Regulating synaptic mem 99.7 1.5E-17 5.1E-22 151.5 12.7 111 26-144 8-129 (129)
34 2dmg_A KIAA1228 protein; beta- 99.7 1.1E-17 3.9E-22 155.0 12.1 120 321-475 8-135 (142)
35 3fbk_A RGS3, RGP3, regulator o 99.7 8.6E-18 2.9E-22 157.9 11.3 119 321-476 11-138 (153)
36 1gmi_A Protein kinase C, epsil 99.7 1.2E-17 4.2E-22 153.5 12.0 117 36-163 4-133 (136)
37 1rsy_A Synaptotagmin I; calciu 99.7 2.3E-17 7.9E-22 154.7 13.9 116 26-146 30-151 (152)
38 2d8k_A Synaptotagmin VII; exoc 99.7 1.9E-17 6.4E-22 153.3 13.1 117 26-147 14-137 (141)
39 1wfm_A Synaptotagmin XIII; C2 99.7 4.4E-17 1.5E-21 150.1 15.4 116 321-475 10-132 (138)
40 2nq3_A Itchy homolog E3 ubiqui 99.7 2.2E-17 7.5E-22 157.7 13.8 127 35-163 33-161 (173)
41 2q3x_A Regulating synaptic mem 99.7 1.3E-17 4.3E-22 159.7 12.1 104 362-476 30-140 (171)
42 3rdl_A Protein kinase C alpha 99.7 2E-17 7E-22 152.3 12.8 103 362-476 16-125 (137)
43 2b3r_A Phosphatidylinositol-4- 99.7 2.1E-17 7.2E-22 151.3 12.6 103 361-475 19-130 (134)
44 1ugk_A Synaptotagmin IV, KIAA1 99.7 3.4E-17 1.2E-21 151.0 14.1 119 321-475 6-133 (138)
45 1v27_A Regulating synaptic mem 99.7 1.2E-17 4.2E-22 154.6 11.1 118 26-149 9-137 (141)
46 3f04_A Synaptotagmin-1; C2A, c 99.7 2E-17 6.7E-22 153.6 12.4 115 26-145 22-142 (143)
47 1tjx_A Similar to synaptotagmi 99.7 5.5E-17 1.9E-21 153.4 14.8 119 321-475 9-147 (159)
48 3pyc_A E3 ubiquitin-protein li 99.7 4.9E-17 1.7E-21 148.6 13.6 119 37-161 4-131 (132)
49 1rh8_A Piccolo protein; beta-s 99.7 7E-18 2.4E-22 156.4 7.8 116 322-475 5-138 (142)
50 1a25_A CALB, protein kinase C 99.7 3.6E-17 1.2E-21 152.9 12.4 102 362-475 31-139 (149)
51 3n5a_A Synaptotagmin-7; calciu 99.7 6.2E-17 2.1E-21 149.2 13.6 92 360-462 14-113 (138)
52 1rh8_A Piccolo protein; beta-s 99.7 1.4E-17 4.7E-22 154.5 8.8 114 25-147 9-140 (142)
53 2chd_A Rabphilin-3A, exophilin 99.7 3.9E-17 1.3E-21 151.4 11.9 118 321-474 13-139 (142)
54 2enp_A B/K protein; C2 type 1, 99.7 4.1E-17 1.4E-21 152.2 12.0 123 320-475 9-141 (147)
55 1wfm_A Synaptotagmin XIII; C2 99.7 1.9E-16 6.4E-21 145.8 15.8 115 26-148 14-135 (138)
56 2cm5_A Rabphilin-3A; protein t 99.7 1.2E-16 4E-21 152.3 14.9 106 321-462 21-134 (166)
57 3fdw_A Synaptotagmin-like prot 99.7 2.4E-17 8.1E-22 154.0 9.4 118 26-148 11-137 (148)
58 3fbk_A RGS3, RGP3, regulator o 99.7 1.2E-16 4E-21 150.0 12.9 115 25-147 16-139 (153)
59 3rdl_A Protein kinase C alpha 99.7 1.1E-16 3.7E-21 147.4 12.1 113 25-147 7-126 (137)
60 1ugk_A Synaptotagmin IV, KIAA1 99.7 1.7E-16 5.9E-21 146.2 12.9 118 26-147 10-135 (138)
61 2dmg_A KIAA1228 protein; beta- 99.7 8.5E-17 2.9E-21 149.1 10.8 117 26-148 12-138 (142)
62 2q3x_A Regulating synaptic mem 99.7 1.2E-16 4E-21 152.9 11.7 113 25-147 21-141 (171)
63 1w15_A Synaptotagmin IV; metal 99.7 3.5E-16 1.2E-20 146.9 14.7 117 321-475 14-138 (153)
64 2chd_A Rabphilin-3A, exophilin 99.7 1.3E-16 4.5E-21 147.8 11.6 115 25-146 18-141 (142)
65 1a25_A CALB, protein kinase C 99.7 2.3E-16 8E-21 147.4 13.0 104 37-146 30-140 (149)
66 2cm5_A Rabphilin-3A; protein t 99.7 5.7E-16 2E-20 147.5 15.9 102 26-127 25-134 (166)
67 1tjx_A Similar to synaptotagmi 99.7 3.3E-16 1.1E-20 148.1 13.5 119 26-147 13-149 (159)
68 2enp_A B/K protein; C2 type 1, 99.7 2E-16 6.9E-21 147.5 10.3 117 26-147 14-143 (147)
69 3n5a_A Synaptotagmin-7; calciu 99.7 3.2E-16 1.1E-20 144.4 11.4 102 26-127 4-113 (138)
70 1w15_A Synaptotagmin IV; metal 99.7 6.4E-16 2.2E-20 145.1 13.3 100 26-125 18-125 (153)
71 2cjt_A UNC-13 homolog A, MUNC1 99.6 1.7E-15 5.9E-20 137.6 11.6 86 361-463 4-90 (131)
72 3l9b_A Otoferlin; C2-domain, b 99.6 4.4E-15 1.5E-19 132.1 12.2 115 39-163 22-140 (144)
73 2cjt_A UNC-13 homolog A, MUNC1 99.6 6.3E-15 2.2E-19 133.8 13.1 88 36-130 3-92 (131)
74 2cjs_A UNC-13 homolog A, MUNC1 99.6 6E-15 2.1E-19 139.5 12.5 118 361-495 13-141 (167)
75 3l9b_A Otoferlin; C2-domain, b 99.6 7.3E-15 2.5E-19 130.7 12.2 118 362-497 21-142 (144)
76 3jzy_A Intersectin 2; C2 domai 99.6 5.1E-15 1.7E-19 167.7 12.8 119 359-494 384-507 (510)
77 3nsj_A Perforin-1; pore formin 99.6 1.6E-14 5.4E-19 161.0 15.7 113 359-496 391-505 (540)
78 2cjs_A UNC-13 homolog A, MUNC1 99.6 1.7E-14 5.8E-19 136.4 12.3 119 36-162 12-140 (167)
79 3nsj_A Perforin-1; pore formin 99.5 7.9E-14 2.7E-18 155.3 14.6 111 35-162 391-503 (540)
80 3jzy_A Intersectin 2; C2 domai 99.5 1E-13 3.5E-18 156.9 13.1 123 197-332 384-506 (510)
81 3bxj_A RAS GTPase-activating p 99.5 5E-15 1.7E-19 164.9 0.9 119 361-495 10-157 (483)
82 1djx_A PLC-D1, phosphoinositid 99.5 2.6E-13 8.7E-18 154.8 14.8 121 360-494 495-623 (624)
83 1djx_A PLC-D1, phosphoinositid 99.5 4.5E-13 1.5E-17 152.9 16.7 119 36-162 495-623 (624)
84 1cjy_A CPLA2, protein (cytosol 99.4 2.3E-13 7.7E-18 156.1 9.3 104 359-474 15-125 (749)
85 1cjy_A CPLA2, protein (cytosol 99.4 3.7E-13 1.3E-17 154.3 10.4 107 35-146 15-127 (749)
86 3bxj_A RAS GTPase-activating p 99.2 6.5E-13 2.2E-17 147.8 -0.2 100 37-147 10-118 (483)
87 3pfq_A PKC-B, PKC-beta, protei 99.1 4.9E-11 1.7E-15 139.0 9.2 102 362-475 172-280 (674)
88 3pfq_A PKC-B, PKC-beta, protei 99.1 9.8E-11 3.3E-15 136.5 10.7 114 26-147 162-282 (674)
89 3qr0_A Phospholipase C-beta (P 99.1 4E-10 1.4E-14 130.8 15.4 111 38-163 650-771 (816)
90 3ohm_B 1-phosphatidylinositol- 99.1 3.1E-10 1.1E-14 132.3 14.0 111 38-163 725-845 (885)
91 2zkm_X 1-phosphatidylinositol- 99.1 7.4E-10 2.5E-14 129.4 14.7 110 37-161 677-797 (799)
92 3qr0_A Phospholipase C-beta (P 99.1 6.2E-10 2.1E-14 129.2 13.9 110 361-494 649-770 (816)
93 3ohm_B 1-phosphatidylinositol- 99.1 4.3E-10 1.5E-14 131.2 11.9 109 362-494 725-844 (885)
94 2zkm_X 1-phosphatidylinositol- 99.0 1E-09 3.5E-14 128.2 12.8 110 360-493 676-797 (799)
95 1yrk_A NPKC-delta, protein kin 98.9 3.1E-08 1.1E-12 85.3 13.0 106 362-493 6-123 (126)
96 2enj_A NPKC-theta, protein kin 98.8 3.5E-08 1.2E-12 86.2 12.1 110 362-494 10-129 (138)
97 1yrk_A NPKC-delta, protein kin 98.8 4.4E-08 1.5E-12 84.4 10.7 114 38-162 6-124 (126)
98 2enj_A NPKC-theta, protein kin 98.7 5.1E-08 1.7E-12 85.1 8.9 114 38-162 10-129 (138)
99 2yrb_A Protein fantom; beta sa 89.5 0.92 3.1E-05 40.9 7.4 127 32-163 12-150 (156)
100 2wxf_A Phosphatidylinositol-4, 88.1 3.5 0.00012 48.7 13.1 106 31-162 213-340 (940)
101 2yrb_A Protein fantom; beta sa 87.8 2.1 7.2E-05 38.6 8.5 126 359-496 15-151 (156)
102 3hhm_A Phosphatidylinositol-4, 83.6 7.4 0.00025 46.3 12.8 106 31-161 351-470 (1091)
103 2wxf_A Phosphatidylinositol-4, 83.1 4.6 0.00016 47.7 10.9 94 362-461 217-324 (940)
104 3l4c_A Dedicator of cytokinesi 83.1 15 0.00051 35.0 12.4 75 71-160 78-155 (220)
105 3hhm_A Phosphatidylinositol-4, 81.7 4.4 0.00015 48.3 9.9 92 361-461 354-455 (1091)
106 2y3a_A Phosphatidylinositol-4, 77.3 2.6 8.9E-05 50.4 6.2 94 362-461 353-470 (1092)
107 3l4c_A Dedicator of cytokinesi 73.8 9.2 0.00031 36.5 7.8 58 398-459 78-138 (220)
108 1e7u_A Phosphatidylinositol 3- 73.0 20 0.00067 42.5 12.1 70 39-109 219-296 (961)
109 1e7u_A Phosphatidylinositol 3- 70.6 14 0.00047 43.7 10.0 96 362-461 218-330 (961)
110 2y3a_A Phosphatidylinositol-4, 65.7 6.8 0.00023 46.9 6.2 68 39-109 354-430 (1092)
111 1gk7_A Vimentin; intermediate 32.1 45 0.0015 22.2 3.3 19 677-695 7-25 (39)
112 3hd7_A Vesicle-associated memb 29.9 1.4E+02 0.0048 23.9 6.7 37 668-704 35-71 (91)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=3.7e-32 Score=284.56 Aligned_cols=229 Identities=25% Similarity=0.357 Sum_probs=190.9
Q ss_pred eEEEEEEEEccccCCCCCCCCCCcEEEEEECC---EEEeeecccCCCCCccccceEEEEeeCC--CCCeEEEEEEEccCC
Q 004297 200 WYLRVNVIEAQDLQPTDKGRFPEVYVKAQLGN---QALRTRVSASRTINPMWNEDLMFVAAEP--FEEHLILTVEDRVAP 274 (763)
Q Consensus 200 g~L~V~i~~a~~L~~~~~~~~~dpyv~v~l~~---~~~kT~~~~~~t~nP~wne~f~f~~~~~--~~~~L~i~V~d~d~~ 274 (763)
+.|+|+|++|++|+.++.++.+||||++++++ +.++|+++++ +.||.|||+|.|.+... ....|.|+|||++..
T Consensus 19 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~-~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~~ 97 (284)
T 2r83_A 19 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRF 97 (284)
T ss_dssp TEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCS-CSSCEEEEEEEECCCGGGCTTCEEEEEEEECCSS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccC-CCCCeeCceEEEEechHHhCcCEEEEEEEECCCC
Confidence 47999999999999999989999999999963 5789999887 99999999999998643 357999999999999
Q ss_pred CCCceeEEEEEeccccccccCCCCCCceeEEcccccccccccccCCceeceEEEEEEEccCccccCCCcccCCCCCcchh
Q 004297 275 NKDEVLGKCMIPLQYVDKRLDHKPVNTRWYNLEKHIVVEGEKKKDTKFASRIHMRICLEGGYHVLDESTHYSSDLRPTAK 354 (763)
Q Consensus 275 ~~d~~iG~~~i~l~~l~~~~~~~~~~~~w~~L~~~~~~~~~~~~~~~~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~~ 354 (763)
+++++||++.++|.++.. ......|++|..... ......|.+.+.+.+.
T Consensus 98 ~~~~~lG~~~i~l~~l~~----~~~~~~w~~L~~~~~------~~~~~~G~i~l~l~~~--------------------- 146 (284)
T 2r83_A 98 SKHDIIGEFKVPMNTVDF----GHVTEEWRDLQSAEK------EEQEKLGDICFSLRYV--------------------- 146 (284)
T ss_dssp SCCCEEEEEEEEGGGCCC----SSCEEEEEECBCCSS------CCCCCCCEEEEEEEEE---------------------
T ss_pred CCCceeEEEEEcchhccc----CCcceeEEEeecccc------ccccccccEEEEEEec---------------------
Confidence 999999999999999864 234678999987521 1123468888777652
Q ss_pred hhccCCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEEC--C---EEEeeeeecCCCCCccccEEEEEeeCC---CcE
Q 004297 355 QLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYG--Q---KWVRTRTIIDSPTPKWNEQYTWEVFDP---CTV 426 (763)
Q Consensus 355 ~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~--~---~~~~T~~~~~t~~P~wne~~~~~v~~~---~~~ 426 (763)
+..+.|.|.|++|+||+++ |..|.+||||++.+. + ..++|+++++++||+|||.|.|.+..+ ...
T Consensus 147 ----p~~~~l~v~v~~a~~L~~~---d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 219 (284)
T 2r83_A 147 ----PTAGKLTVVILEAKNLKKM---DVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQ 219 (284)
T ss_dssp ----TTTTEEEEEEEEEESCCCC---STTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEE
T ss_pred ----CcCCceEEEEEEeECCCCc---CCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceE
Confidence 2347999999999999987 566899999999883 3 357999999999999999999998754 347
Q ss_pred EEEEEEeCCCCCCCCCCCCCCCCccEEEEEecccc------------cCCCeEeeeEeeee
Q 004297 427 ITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTL------------ETDRVYTHSYPLLV 475 (763)
Q Consensus 427 l~i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l------------~~~~~~~~~~~L~~ 475 (763)
|.|+|||++.++ +|++||++.|++..+ ..++...+||+|..
T Consensus 220 l~i~V~d~d~~~--------~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~ 272 (284)
T 2r83_A 220 VVVTVLDYDKIG--------KNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 272 (284)
T ss_dssp EEEEEEECCSSS--------CCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred EEEEEEeCCCCC--------CCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCC
Confidence 999999999876 899999999999874 24567789999965
No 2
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=3e-32 Score=285.23 Aligned_cols=243 Identities=25% Similarity=0.394 Sum_probs=200.6
Q ss_pred ceeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC---eeeeeeeeCCCCCCeeccEEEEEecC--CCCc
Q 004297 25 DKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN---YKGTTRHFEKKTNPEWNQVFAFSKDR--IQSS 99 (763)
Q Consensus 25 ~~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~---~~~kT~~~~~t~nP~Wne~f~f~v~~--~~~~ 99 (763)
..+++.|+ ...+.|.|+|++|++|+..+..+.+||||++++++ ++++|++++++.||.|||+|.|.+.. ....
T Consensus 8 l~~~l~y~--~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~ 85 (284)
T 2r83_A 8 LQYSLDYD--FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGK 85 (284)
T ss_dssp EEEEEEEE--TTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTC
T ss_pred EEEEEEEE--CCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcC
Confidence 34555555 56689999999999999999889999999999964 47889999999999999999999853 3467
Q ss_pred eEEEEEEeCCCC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCC--CccceEEEEEEEEcccCCCCCCcccccc
Q 004297 100 VLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKG--DKVRGELMLAVWMGTQADEAFPEAWHSD 176 (763)
Q Consensus 100 ~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~--~~~~G~i~l~~~~~~~~d~~~~~~~~~~ 176 (763)
.|.|+|||.+.. ++++||++.++|.++..+. ...+|++|....+ ....|+|.+++.+.+
T Consensus 86 ~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p------------- 147 (284)
T 2r83_A 86 TLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQSAEKEEQEKLGDICFSLRYVP------------- 147 (284)
T ss_dssp EEEEEEEECCSSSCCCEEEEEEEEGGGCCCSS-----CEEEEEECBCCSSCCCCCCCEEEEEEEEET-------------
T ss_pred EEEEEEEECCCCCCCceeEEEEEcchhcccCC-----cceeEEEeeccccccccccccEEEEEEecC-------------
Confidence 999999999988 8999999999999997653 3578999987643 235699998876642
Q ss_pred ccccccccccccccccccccCceeEEEEEEEEccccCCCCCCCCCCcEEEEEEC--C---EEEeeecccCCCCCccccce
Q 004297 177 AATVTGIEGLANIRSKVYLSPKLWYLRVNVIEAQDLQPTDKGRFPEVYVKAQLG--N---QALRTRVSASRTINPMWNED 251 (763)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~p~~g~L~V~i~~a~~L~~~~~~~~~dpyv~v~l~--~---~~~kT~~~~~~t~nP~wne~ 251 (763)
..+.|.|.|++|++|+.++.++.+||||++++. + .+++|+++++ +.||.|||.
T Consensus 148 ---------------------~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~ 205 (284)
T 2r83_A 148 ---------------------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKN-TLNPYYNES 205 (284)
T ss_dssp ---------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCS-CSSCEEEEE
T ss_pred ---------------------cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecC-CCCCEEcee
Confidence 234799999999999999998999999999985 2 4688999887 999999999
Q ss_pred EEEEeeCCC--CCeEEEEEEEccCCCCCceeEEEEEeccccccc--------cCCCCCCceeEEcccc
Q 004297 252 LMFVAAEPF--EEHLILTVEDRVAPNKDEVLGKCMIPLQYVDKR--------LDHKPVNTRWYNLEKH 309 (763)
Q Consensus 252 f~f~~~~~~--~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l~~~--------~~~~~~~~~w~~L~~~ 309 (763)
|.|.+.... ...|.|+|||++..+++++||++.+++..+... ...+....+|++|...
T Consensus 206 f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 206 FSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp EEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred EEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 999986543 347999999999999999999999999864321 1123446789999875
No 3
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.98 E-value=4.3e-32 Score=285.18 Aligned_cols=229 Identities=23% Similarity=0.355 Sum_probs=187.7
Q ss_pred eEEEEEEEEccccCCCCCCCCCCcEEEEEE---CCEEEeeecccCCCCCccccceEEEEeeCCC--CCeEEEEEEEccCC
Q 004297 200 WYLRVNVIEAQDLQPTDKGRFPEVYVKAQL---GNQALRTRVSASRTINPMWNEDLMFVAAEPF--EEHLILTVEDRVAP 274 (763)
Q Consensus 200 g~L~V~i~~a~~L~~~~~~~~~dpyv~v~l---~~~~~kT~~~~~~t~nP~wne~f~f~~~~~~--~~~L~i~V~d~d~~ 274 (763)
+.|.|+|++|++|+.++.++.+||||++++ +++.++|+++++ +.||.|||+|.|.+.... ...|.|+|||+|.+
T Consensus 20 ~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~ 98 (296)
T 1dqv_A 20 DQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRK-TLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRF 98 (296)
T ss_dssp CEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCS-CSSCEEEEEEEEECCGGGGSSCCCEEEEEECCSS
T ss_pred CEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCC-CCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCCC
Confidence 479999999999999999999999999999 567899999887 999999999999986432 45899999999999
Q ss_pred CCCceeEEEEEe-ccccccccCCCCCCceeEEcccccccccccccCCceeceEEEEEEEccCccccCCCcccCCCCCcch
Q 004297 275 NKDEVLGKCMIP-LQYVDKRLDHKPVNTRWYNLEKHIVVEGEKKKDTKFASRIHMRICLEGGYHVLDESTHYSSDLRPTA 353 (763)
Q Consensus 275 ~~d~~iG~~~i~-l~~l~~~~~~~~~~~~w~~L~~~~~~~~~~~~~~~~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~ 353 (763)
+++++||++.++ +.++.. .......|+.|.... ......|+|.+.+++.
T Consensus 99 ~~~~~iG~~~i~~l~~~~~---~~~~~~~w~~L~~~~-------~~~~~~G~i~vsl~y~-------------------- 148 (296)
T 1dqv_A 99 SRHDLIGQVVLDNLLELAE---QPPDRPLWRDILEGG-------SEKADLGELNFSLCYL-------------------- 148 (296)
T ss_dssp SCCCEEEEEECCCTTGGGS---SCSSCCCCEECBCCS-------SCCSCCCEEEEEEEEE--------------------
T ss_pred CCCceEEEEEecccccccc---CCccceeeecccccc-------ccccccceEEEEEEec--------------------
Confidence 999999999996 444432 123356899997642 1223468888887652
Q ss_pred hhhccCCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEEC--C---EEEeeeeecCCCCCccccEEEEEeeCC---Cc
Q 004297 354 KQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYG--Q---KWVRTRTIIDSPTPKWNEQYTWEVFDP---CT 425 (763)
Q Consensus 354 ~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~--~---~~~~T~~~~~t~~P~wne~~~~~v~~~---~~ 425 (763)
+..|.|.|.|++|+||+++ |..|.+||||++.++ + ..++|+++++++||+|||.|.|.+... ..
T Consensus 149 -----~~~~~l~v~v~~a~~L~~~---d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~ 220 (296)
T 1dqv_A 149 -----PTAGLLTVTIIKASNLKAM---DLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENV 220 (296)
T ss_dssp -----TTTTEEEEEEEEEESCCCC---SSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSC
T ss_pred -----cccceeEEEEEEeecCCcc---CCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCc
Confidence 2348999999999999987 566889999999885 3 468999999999999999999998754 45
Q ss_pred EEEEEEEeCCCCCCCCCCCCCCCCccEEEEEeccccc-------------CCCeEeeeEeeee
Q 004297 426 VITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLE-------------TDRVYTHSYPLLV 475 (763)
Q Consensus 426 ~l~i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~-------------~~~~~~~~~~L~~ 475 (763)
.|.|+|||++.++ +|++||.+.|++..+. .++...+|++|..
T Consensus 221 ~L~i~V~d~d~~~--------~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~ 275 (296)
T 1dqv_A 221 GLSIAVVDYDCIG--------HNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVE 275 (296)
T ss_dssp CCCCEEEECCSSS--------CCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBB
T ss_pred EEEEEEEeCCCCC--------CCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccC
Confidence 7999999999876 8999999999999863 3455667777754
No 4
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.97 E-value=1.4e-31 Score=281.28 Aligned_cols=245 Identities=29% Similarity=0.442 Sum_probs=196.6
Q ss_pred eeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeeeeeeeeCCCCCCeeccEEEEEec--CCCCce
Q 004297 26 KLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKM---GNYKGTTRHFEKKTNPEWNQVFAFSKD--RIQSSV 100 (763)
Q Consensus 26 ~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~---~~~~~kT~~~~~t~nP~Wne~f~f~v~--~~~~~~ 100 (763)
++.+...+....+.|.|+|++|++|+..|..|.+||||++++ +.++++|++++++.||.|||+|.|.+. ++....
T Consensus 8 ~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 87 (296)
T 1dqv_A 8 RISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRK 87 (296)
T ss_dssp EEEEEEECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCC
T ss_pred EEEEEEEEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCE
Confidence 344444455567899999999999999999999999999999 447889999999999999999999984 333568
Q ss_pred EEEEEEeCCCC-CCeeeEEEEEE-ccccCCCCCCCCCCcCeEEEeecCCC-CccceEEEEEEEEcccCCCCCCccccccc
Q 004297 101 LEVTVKDKDFV-KDDFMGRVLFD-LNEIPKRVPPDSPLAPQWYRLEDRKG-DKVRGELMLAVWMGTQADEAFPEAWHSDA 177 (763)
Q Consensus 101 l~i~V~d~~~~-~d~~lG~~~i~-l~~l~~~~~~~~~~~~~w~~L~~~~~-~~~~G~i~l~~~~~~~~d~~~~~~~~~~~ 177 (763)
|.|+|||.+.+ ++++||++.++ +.++.... .....|++|....+ ....|+|.+++.+.+
T Consensus 88 L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~----~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~-------------- 149 (296)
T 1dqv_A 88 LHFSVYDFDRFSRHDLIGQVVLDNLLELAEQP----PDRPLWRDILEGGSEKADLGELNFSLCYLP-------------- 149 (296)
T ss_dssp CEEEEEECCSSSCCCEEEEEECCCTTGGGSSC----SSCCCCEECBCCSSCCSCCCEEEEEEEEET--------------
T ss_pred EEEEEEEcCCCCCCceEEEEEeccccccccCC----ccceeeeccccccccccccceEEEEEEecc--------------
Confidence 99999999998 89999999995 44444321 12467999987543 235699999887642
Q ss_pred cccccccccccccccccccCceeEEEEEEEEccccCCCCCCCCCCcEEEEEEC--C---EEEeeecccCCCCCccccceE
Q 004297 178 ATVTGIEGLANIRSKVYLSPKLWYLRVNVIEAQDLQPTDKGRFPEVYVKAQLG--N---QALRTRVSASRTINPMWNEDL 252 (763)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~p~~g~L~V~i~~a~~L~~~~~~~~~dpyv~v~l~--~---~~~kT~~~~~~t~nP~wne~f 252 (763)
..+.|.|+|++|++|+.++..+.+||||++++. + .+++|+++++ +.||.|||.|
T Consensus 150 --------------------~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f 208 (296)
T 1dqv_A 150 --------------------TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKN-TLNPTYNEAL 208 (296)
T ss_dssp --------------------TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCS-CSSCEEEECC
T ss_pred --------------------ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecC-CCCCeECceE
Confidence 234799999999999999999999999999996 2 5789999887 9999999999
Q ss_pred EEEeeCCC--CCeEEEEEEEccCCCCCceeEEEEEecccccc-cc--------CCCCCCceeEEcccc
Q 004297 253 MFVAAEPF--EEHLILTVEDRVAPNKDEVLGKCMIPLQYVDK-RL--------DHKPVNTRWYNLEKH 309 (763)
Q Consensus 253 ~f~~~~~~--~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l~~-~~--------~~~~~~~~w~~L~~~ 309 (763)
.|.+.... ...|.|+|||++..+++++||++.|++.++.. .. ..+....+|+.|...
T Consensus 209 ~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 209 VFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp CCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred EEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 99886543 44799999999999999999999999987643 00 023346678877765
No 5
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.84 E-value=7.3e-21 Score=174.47 Aligned_cols=124 Identities=25% Similarity=0.448 Sum_probs=110.1
Q ss_pred cCCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCEEEeeeeecCCCCCccccEEEEEeeCCCcEEEEEEEeCCCC
Q 004297 358 KSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTIIDSPTPKWNEQYTWEVFDPCTVITIGVFDNCHL 437 (763)
Q Consensus 358 ~~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~~~~~T~~~~~t~~P~wne~~~~~v~~~~~~l~i~V~d~~~~ 437 (763)
....|.|.|+|++|+||+++ +..|++||||++.++++.++|+++++++||.|||.|.|.+.++...|.|+|||++..
T Consensus 9 ~~~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~ 85 (133)
T 2ep6_A 9 VKDVGILQVKVLKAADLLAA---DFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGD 85 (133)
T ss_dssp CCCSEEEEEEEEEEESCCCS---SSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETT
T ss_pred cCCceEEEEEEEeeECCCCC---CCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCC
Confidence 45679999999999999987 556899999999999999999999999999999999999998888999999999987
Q ss_pred CCCCCCCCCCCCccEEEEEecccccCCCeEeeeEeeeeeCCCCcccceEEEEEEEEee
Q 004297 438 HGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYPNGVKKMGEIHLAVRFTC 495 (763)
Q Consensus 438 ~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~~ 495 (763)
+ +|++||++.|+|.++..+. .+||+|.....++ +..|+|+++++|.+
T Consensus 86 ~--------~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~-~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 86 K--------PPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQ-AFKGVIYLEMDLIY 132 (133)
T ss_dssp E--------EEEECCBCEEEGGGCCSSC--CEECCCBCSCTTS-CCSSEEEEEEEEEE
T ss_pred C--------CCCeeEEEEEEHHHccCCC--ceEEEeecCCCCC-ccceEEEEEEEEEe
Confidence 5 7899999999999998776 6899998655433 45699999999854
No 6
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=1.2e-19 Score=168.07 Aligned_cols=125 Identities=20% Similarity=0.297 Sum_probs=107.7
Q ss_pred CcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCEEEeeeeecCCCCCccccEEEEEeeC----CCcEEEEEEEeCC
Q 004297 360 SIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTIIDSPTPKWNEQYTWEVFD----PCTVITIGVFDNC 435 (763)
Q Consensus 360 ~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~~~~~T~~~~~t~~P~wne~~~~~v~~----~~~~l~i~V~d~~ 435 (763)
..|.|.|+|++|+||+.+ +. |.+||||++.++++.++|+++++++||+|||.|.|.+.. ....|.|+|||++
T Consensus 5 ~~g~L~v~v~~a~~L~~~---~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d 80 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKT---KF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFE 80 (140)
T ss_dssp BCCEEEEEEEEEESCCCC---SS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETT
T ss_pred CCcEEEEEEEEeeCCCCC---CC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECC
Confidence 348999999999999987 55 899999999999999999999999999999999999975 3679999999999
Q ss_pred CCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEeeeee-CCCCcccceEEEEEEEEeec
Q 004297 436 HLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVL-YPNGVKKMGEIHLAVRFTCS 496 (763)
Q Consensus 436 ~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~~~-~~~g~~~~G~i~l~~~~~~~ 496 (763)
.++ +|++||++.|+|.++..+.....||+|... ...+....|+|+++++|.+.
T Consensus 81 ~~~--------~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 81 TIG--------QNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp CSS--------SCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCC
T ss_pred CCC--------CCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECC
Confidence 876 789999999999999988888899983322 23344456999999999653
No 7
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.82 E-value=6.2e-20 Score=169.03 Aligned_cols=123 Identities=24% Similarity=0.356 Sum_probs=108.6
Q ss_pred CCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCEEEeeeeec-CCCCCccccEEEEEeeCCCcEEEEEEEeCCCC
Q 004297 359 SSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTII-DSPTPKWNEQYTWEVFDPCTVITIGVFDNCHL 437 (763)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~~~~~T~~~~-~t~~P~wne~~~~~v~~~~~~l~i~V~d~~~~ 437 (763)
.+.|.|.|+|++|+||+++ +..|.+||||++.++++.++|++++ +++||+|||.|.|.+.+....|.|+|||++.+
T Consensus 7 ~~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~ 83 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDA---DFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVG 83 (136)
T ss_dssp CCEEEEEEEEEEEEECSSC---CSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSC
T ss_pred CCcEEEEEEEEeccCCCCc---ccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCC
Confidence 3459999999999999987 5568999999999999999999998 89999999999999998888999999999987
Q ss_pred CCCCCCCCCCCCccEEEEEecccc-cCCCeEeeeEeeeeeCCCCcccceEEEEEEEEeec
Q 004297 438 HGGDKAGGARDSRIGKVRIRLSTL-ETDRVYTHSYPLLVLYPNGVKKMGEIHLAVRFTCS 496 (763)
Q Consensus 438 ~~~~~~~~~~d~~lG~v~i~l~~l-~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~~~ 496 (763)
+ +|++||++.|+|.++ ..+.....||+|.. +.+..|+|+++++|.+.
T Consensus 84 ~--------~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~----~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 84 T--------EDDAVGEATIPLEPVFVEGSIPPTAYNVVK----DEEYKGEIWVALSFKPS 131 (136)
T ss_dssp T--------TTCCSEEEEEESHHHHHHSEEEEEEEEEEE----TTEEEEEEEEEEEEEEC
T ss_pred C--------CCceEEEEEEEHHHhccCCCCCcEEEEeec----CCccCEEEEEEEEEEeC
Confidence 6 899999999999999 55666789999971 23457999999999764
No 8
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.82 E-value=5.5e-20 Score=171.52 Aligned_cols=119 Identities=22% Similarity=0.289 Sum_probs=102.0
Q ss_pred CCcceEEEEEEEccCCCCCccCC-------CCCCCCcEEEEEECCEE-EeeeeecCCCCCccccEEEEEeeCCCcEEEEE
Q 004297 359 SSIGVLELGILNAQGLMPMKTKD-------GRGTTDAYCVAKYGQKW-VRTRTIIDSPTPKWNEQYTWEVFDPCTVITIG 430 (763)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~~~~~~-------~~g~~Dpyv~v~~~~~~-~~T~~~~~t~~P~wne~~~~~v~~~~~~l~i~ 430 (763)
...|.|+|+|++|+||+++|... ..|.+||||++.++++. .||+++++|+||+|||.|.|.+.+ ...|.|+
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~~ 104 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLELA 104 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEEE
Confidence 45699999999999999875210 13679999999999876 699999999999999999999876 4689999
Q ss_pred EEeCCCCCCCCCCCCCCCCccEEEEEecccccCC----CeEeeeEeeeeeCCCCcccceEEEEEEEEe
Q 004297 431 VFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETD----RVYTHSYPLLVLYPNGVKKMGEIHLAVRFT 494 (763)
Q Consensus 431 V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~----~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~ 494 (763)
|||+|.++ +|++||++.|+|.++..+ .....||+|. .+|+|+|+++|.
T Consensus 105 V~D~d~~~--------~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~--------~~G~i~l~l~~~ 156 (157)
T 2fk9_A 105 VFHETPLG--------YDHFVANCTLQFQELLRTTGASDTFEGWVDLE--------PEGKVFVVITLT 156 (157)
T ss_dssp EEECCSSS--------SCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB--------SSCEEEEEEEEC
T ss_pred EEECCCCC--------CCCEEEEEEEEHHHhhcccCCCCcccEEEECC--------CCcEEEEEEEEE
Confidence 99999886 899999999999999754 7789999994 259999998873
No 9
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.82 E-value=2.6e-19 Score=167.41 Aligned_cols=128 Identities=23% Similarity=0.355 Sum_probs=105.2
Q ss_pred cceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCEEEeeeeecCCCCCccccEEEEEeeCCCcEEEEEEEeCCCCCC-
Q 004297 361 IGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTIIDSPTPKWNEQYTWEVFDPCTVITIGVFDNCHLHG- 439 (763)
Q Consensus 361 ~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~~~~~T~~~~~t~~P~wne~~~~~v~~~~~~l~i~V~d~~~~~~- 439 (763)
.|.|+|+|++|+||+++ |..|.+||||++.++++.++|+++++++||.|||.|.|.+.++...|.|+|||++....
T Consensus 16 ~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~ 92 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAK---DKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKS 92 (148)
T ss_dssp CEEEEEEEEEEESCCCC---STTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHH
T ss_pred ccEEEEEEEeeeCCCCC---CCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccc
Confidence 49999999999999987 55689999999999999999999999999999999999999888899999999987400
Q ss_pred --CCCCCCCCCCccEEEEEecccccCCCeEeeeEeeeeeCCCCcccceEEEEEEEEe
Q 004297 440 --GDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYPNGVKKMGEIHLAVRFT 494 (763)
Q Consensus 440 --~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~ 494 (763)
.++...++|++||++.|+|.++. ....+||+|......+ +..|+|+|+++|.
T Consensus 93 ~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~-~~~G~i~l~l~~e 146 (148)
T 3kwu_A 93 RVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDKS-AVSGAIRLHISVE 146 (148)
T ss_dssp HHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSSTTC-CCCCEEEEEEEEE
T ss_pred cccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCCCCC-CCceEEEEEEEEE
Confidence 00000017899999999999994 4458999997543322 3469999999885
No 10
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.81 E-value=1.6e-19 Score=165.57 Aligned_cols=125 Identities=35% Similarity=0.540 Sum_probs=111.1
Q ss_pred eecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeeCCCCCCeeccEEEEEecCCCCceEEEEEEeCC
Q 004297 30 TYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDKD 109 (763)
Q Consensus 30 ~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~~l~i~V~d~~ 109 (763)
..++.++.+.|.|+|++|++|+..+..|.+||||++++++++++|++++++.||.|||+|.|.+.+. ...|.|+|||++
T Consensus 5 s~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~d 83 (133)
T 2ep6_A 5 SSGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDED 83 (133)
T ss_dssp CCCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEEE
T ss_pred cccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEECC
Confidence 4567788999999999999999999889999999999999999999999999999999999999864 578999999999
Q ss_pred CC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCCC-ccceEEEEEEEEc
Q 004297 110 FV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGD-KVRGELMLAVWMG 162 (763)
Q Consensus 110 ~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~-~~~G~i~l~~~~~ 162 (763)
.. ++++||++.+++.++..+ ..+|++|....++ ...|+|++++.+.
T Consensus 84 ~~~~~~~lG~~~i~l~~l~~~-------~~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 84 GDKPPDFLGKVAIPLLSIRDG-------QPNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp TTEEEEECCBCEEEGGGCCSS-------CCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred CCCCCCeeEEEEEEHHHccCC-------CceEEEeecCCCCCccceEEEEEEEEE
Confidence 98 899999999999999653 3589999977532 4679999998764
No 11
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.81 E-value=2.3e-19 Score=168.73 Aligned_cols=124 Identities=25% Similarity=0.383 Sum_probs=100.8
Q ss_pred CCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC------EEEeeeeecCCCCCccccEEEEEeeCCCcEEEEEEE
Q 004297 359 SSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ------KWVRTRTIIDSPTPKWNEQYTWEVFDPCTVITIGVF 432 (763)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~------~~~~T~~~~~t~~P~wne~~~~~v~~~~~~l~i~V~ 432 (763)
+..+.|+|+|++|+||+++ +..|++||||++.+++ ..++|+++++++||+|||.|.|.+.+....|.|+||
T Consensus 17 ~~~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~ 93 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKK---DILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVF 93 (153)
T ss_dssp TTCEEEEEEEEEEESCC----------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEE
T ss_pred CCccEEEEEEEEeeCCCCC---CCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEE
Confidence 4568999999999999987 5568999999999863 578999999999999999999999887889999999
Q ss_pred eCCCCCCCCCCCCCCCCccEEEEEecccccCCCe------EeeeEeeeeeCCCCcccceEEEEEEEEe
Q 004297 433 DNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRV------YTHSYPLLVLYPNGVKKMGEIHLAVRFT 494 (763)
Q Consensus 433 d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~------~~~~~~L~~~~~~g~~~~G~i~l~~~~~ 494 (763)
|++.++ +|++||++.|+|.++..+.. ..+||+|......+ +..|+|++++.|.
T Consensus 94 d~d~~~--------~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 94 DENRLT--------RDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYL 152 (153)
T ss_dssp ECCSSS--------CCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTC-CCCSEEEEEEEEC
T ss_pred ECCCCc--------CCCeeEEEEEEHHHcccCCCcccccccccccccccccCCC-CcceEEEEEEEEe
Confidence 999876 89999999999999976542 25899997654333 4569999999884
No 12
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=7e-19 Score=162.79 Aligned_cols=123 Identities=25% Similarity=0.407 Sum_probs=108.2
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeeCCCCCCeeccEEEEEecCC---CCceEEEEEEeCCCC-
Q 004297 36 QMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFEKKTNPEWNQVFAFSKDRI---QSSVLEVTVKDKDFV- 111 (763)
Q Consensus 36 ~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~---~~~~l~i~V~d~~~~- 111 (763)
..+.|.|+|++|++|+..+. +.+||||++++++++++|++++++.||+|||+|.|.+... ....|.|+|||++..
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~ 83 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIG 83 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSS
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCC
Confidence 35799999999999999998 9999999999999999999999999999999999998643 368899999999998
Q ss_pred CCeeeEEEEEEccccCCCCCCCCCCcCeEEE---eecCCCCccceEEEEEEEEccc
Q 004297 112 KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYR---LEDRKGDKVRGELMLAVWMGTQ 164 (763)
Q Consensus 112 ~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~---L~~~~~~~~~G~i~l~~~~~~~ 164 (763)
+|++||++.++|.++..+. ....|++ |.+..+....|+|.+++.|.+.
T Consensus 84 ~~~~lG~~~i~l~~l~~~~-----~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 84 QNKLIGTATVALKDLTGDQ-----SRSLPYKLISLLNEKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp SCCCCEEEEEEGGGTCSSS-----CEEEEEEEEEEECTTCCEEEEEEEEEEEECCC
T ss_pred CCceEEEEEEEHHHhccCC-----CceeEEeeeeccCCCCCCCCCEEEEEEEEECC
Confidence 8999999999999997653 2567987 7776666678999999999763
No 13
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.79 E-value=8e-19 Score=169.06 Aligned_cols=126 Identities=26% Similarity=0.387 Sum_probs=100.8
Q ss_pred CCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC------EEEeeeeecCCCCCccccEEEEEeeCCCcEEEEEEE
Q 004297 359 SSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ------KWVRTRTIIDSPTPKWNEQYTWEVFDPCTVITIGVF 432 (763)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~------~~~~T~~~~~t~~P~wne~~~~~v~~~~~~l~i~V~ 432 (763)
...|.|+|+|++|+||+++ +..|++||||++.+++ ..++|+++++++||.|||.|.|.+......|.|+||
T Consensus 5 ~~~g~L~V~v~~a~~L~~~---d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~ 81 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKK---DILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVF 81 (176)
T ss_dssp TTCEEEEEEEEEEESCC------CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEE
T ss_pred CCcEEEEEEEEEeeCCCCc---CCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEE
Confidence 4569999999999999987 5568999999999865 678999999999999999999999987789999999
Q ss_pred eCCCCCCCCCCCCCCCCccEEEEEecccccCCCeE-e-----eeEeeeeeCCCCcccceEEEEEEEEeec
Q 004297 433 DNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVY-T-----HSYPLLVLYPNGVKKMGEIHLAVRFTCS 496 (763)
Q Consensus 433 d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~-~-----~~~~L~~~~~~g~~~~G~i~l~~~~~~~ 496 (763)
|++.++ +|++||++.|+|.++..+... . +||+|......+ +..|+|+|++.|.+.
T Consensus 82 d~d~~~--------~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 82 DENRLT--------RDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYLPK 142 (176)
T ss_dssp ECC------------CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTC-CCCSEEEEEEEECC-
T ss_pred ECCCCC--------CCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCC-ccCEEEEEEEEEEeC
Confidence 999876 889999999999999776432 1 799997654443 346999999999654
No 14
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.79 E-value=4.3e-19 Score=161.02 Aligned_cols=118 Identities=16% Similarity=0.207 Sum_probs=99.3
Q ss_pred cceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC---EEEeeeeecCCCCCccccEEEEEeeC-CCcEEEEEEEeCCC
Q 004297 361 IGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ---KWVRTRTIIDSPTPKWNEQYTWEVFD-PCTVITIGVFDNCH 436 (763)
Q Consensus 361 ~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~---~~~~T~~~~~t~~P~wne~~~~~v~~-~~~~l~i~V~d~~~ 436 (763)
.|.|.|+|++|+||++++..+..|++||||++.+++ ..++|+++++++||+|||.|.|.+.. ....|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 379999999999999853224458899999999985 68999999999999999999999964 46789999999987
Q ss_pred CCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEeeeeeCCCCcccceEEEEEEEE
Q 004297 437 LHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYPNGVKKMGEIHLAVRF 493 (763)
Q Consensus 437 ~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~ 493 (763)
. +|++||++.|+|.++..+.....||+|.. ...|.|+++++.
T Consensus 82 ~---------~~~~iG~~~i~l~~l~~~~~~~~~~~L~~------~~~g~i~~~le~ 123 (126)
T 1rlw_A 82 V---------MDETLGTATFTVSSMKVGEKKEVPFIFNQ------VTEMVLEMSLEV 123 (126)
T ss_dssp S---------CCEEEEEEEEEGGGSCTTCEEEEEEEETT------TEEEEEEEEEEC
T ss_pred C---------CCceeEEEEEEHHHccCCCcEEEEEEcCC------CceEEEEEEEEe
Confidence 5 57899999999999999999999999953 224666666553
No 15
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.78 E-value=3.1e-18 Score=161.07 Aligned_cols=129 Identities=29% Similarity=0.447 Sum_probs=102.7
Q ss_pred cCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeeeeeCCCCCCeeccEEEEEecCCCCceEEEEEEe
Q 004297 34 VEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN------YKGTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKD 107 (763)
Q Consensus 34 ~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~------~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~~l~i~V~d 107 (763)
....+.|.|+|++|++|+..+..|.+||||++++++ .+++|++++++.||+|||+|.|.+... ...|.|+|||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d 94 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFD 94 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEE
Confidence 456689999999999999999889999999999974 578999999999999999999999763 5789999999
Q ss_pred CCCC-CCeeeEEEEEEccccCCCCCCC-CCCcCeEEEeecCCC-CccceEEEEEEEEcc
Q 004297 108 KDFV-KDDFMGRVLFDLNEIPKRVPPD-SPLAPQWYRLEDRKG-DKVRGELMLAVWMGT 163 (763)
Q Consensus 108 ~~~~-~d~~lG~~~i~l~~l~~~~~~~-~~~~~~w~~L~~~~~-~~~~G~i~l~~~~~~ 163 (763)
++.. ++++||++.++|.++....... .....+||+|....+ ....|+|+++++|.+
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 9998 8999999999999998664321 233469999987642 356799999998853
No 16
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.78 E-value=6.6e-19 Score=162.00 Aligned_cols=119 Identities=19% Similarity=0.305 Sum_probs=100.4
Q ss_pred cceEEEEEEEccCCCCCccCCC--------CCCCCcEEEEEECCEE-EeeeeecCCCCCccccEEEEEeeCCCcEEEEEE
Q 004297 361 IGVLELGILNAQGLMPMKTKDG--------RGTTDAYCVAKYGQKW-VRTRTIIDSPTPKWNEQYTWEVFDPCTVITIGV 431 (763)
Q Consensus 361 ~g~l~v~v~~a~~L~~~~~~~~--------~g~~Dpyv~v~~~~~~-~~T~~~~~t~~P~wne~~~~~v~~~~~~l~i~V 431 (763)
.|.|+|+|++|+||++++.... .+.+||||++.+++.. .+|+++++|+||+|||.|.|.+.++ ..|.|+|
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~V 83 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELAV 83 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEEE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEEE
Confidence 4899999999999998742100 1349999999998875 6999999999999999999999876 8999999
Q ss_pred EeCCCCCCCCCCCCCCCCccEEEEEecccccCC--CeEeeeEeeeeeCCCCcccceEEEEEEEEeec
Q 004297 432 FDNCHLHGGDKAGGARDSRIGKVRIRLSTLETD--RVYTHSYPLLVLYPNGVKKMGEIHLAVRFTCS 496 (763)
Q Consensus 432 ~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~--~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~~~ 496 (763)
||+|.++ +|++||++.|+|.++..+ .....|++|. ..|+|+|+++|...
T Consensus 84 ~d~d~~~--------~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~--------~~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 84 FHDAPIG--------YDDFVANCTIQFEELLQNGSRHFEDWIDLE--------PEGKVYVIIDLSGS 134 (136)
T ss_dssp EECCSSS--------SCEEEEEEEEEHHHHTSTTCSEEEEEEECB--------SSCEEEEEEEEEEE
T ss_pred EeCCCCC--------CCCEEEEEEEEHHHhcccCCCCccEEEEcC--------CCeEEEEEEEEEec
Confidence 9999876 899999999999999764 4568999984 35999999998653
No 17
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.78 E-value=5.5e-19 Score=162.62 Aligned_cols=124 Identities=27% Similarity=0.417 Sum_probs=108.4
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeeC-CCCCCeeccEEEEEecCCCCceEEEEEEeCCCC-C
Q 004297 35 EQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFE-KKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDFV-K 112 (763)
Q Consensus 35 ~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~~~~kT~~~~-~t~nP~Wne~f~f~v~~~~~~~l~i~V~d~~~~-~ 112 (763)
.+.+.|.|+|++|++|+..+..+.+||||++++++++++|++++ ++.||.|||+|.|.+.+ ....|.|+|||++.. +
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~~~~ 85 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDVGTE 85 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSSCTT
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCCCCC
Confidence 56789999999999999999889999999999999999999998 89999999999999986 578899999999988 8
Q ss_pred CeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCCCccceEEEEEEEEcccC
Q 004297 113 DDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVWMGTQA 165 (763)
Q Consensus 113 d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~~~~~ 165 (763)
|++||++.++|.++.... ....+||+|. .+....|+|++++.|.+..
T Consensus 86 d~~lG~~~i~l~~l~~~~----~~~~~w~~L~--~~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 86 DDAVGEATIPLEPVFVEG----SIPPTAYNVV--KDEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp TCCSEEEEEESHHHHHHS----EEEEEEEEEE--ETTEEEEEEEEEEEEEECC
T ss_pred CceEEEEEEEHHHhccCC----CCCcEEEEee--cCCccCEEEEEEEEEEeCC
Confidence 999999999999995331 2246899998 2345689999999987643
No 18
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.77 E-value=5.5e-18 Score=158.33 Aligned_cols=119 Identities=32% Similarity=0.552 Sum_probs=104.8
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeeCCCCCCeeccEEEEEecCCCCceEEEEEEeCCCC----
Q 004297 36 QMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDFV---- 111 (763)
Q Consensus 36 ~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~~l~i~V~d~~~~---- 111 (763)
..+.|.|+|++|++|+..+..|.+||||++++++++++|++++++.||.|||+|.|.+... ...|.|+|||++..
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~~~~~ 93 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDDIKSR 93 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCSHHHH
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCCcccc
Confidence 3589999999999999999999999999999999999999999999999999999999764 47899999999973
Q ss_pred --------CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCCC-ccceEEEEEEEEc
Q 004297 112 --------KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGD-KVRGELMLAVWMG 162 (763)
Q Consensus 112 --------~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~-~~~G~i~l~~~~~ 162 (763)
++++||++.++|.++... ..+||+|....+. ...|+|++++.+.
T Consensus 94 ~~~~~~~~~~~~lG~~~i~l~~l~~~-------~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 94 VKQRFKRESDDFLGQTIIEVRTLSGE-------MDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHTTTSSCSSEEEEEEEEEGGGCCSE-------EEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred ccccccCCCCccEEEEEEEHHHCcCC-------CCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 899999999999999422 5689999976532 3679999998874
No 19
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.77 E-value=5.7e-18 Score=163.10 Aligned_cols=129 Identities=28% Similarity=0.464 Sum_probs=102.8
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeeeeeCCCCCCeeccEEEEEecCCCCceEEEEEEeC
Q 004297 35 EQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN------YKGTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDK 108 (763)
Q Consensus 35 ~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~------~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~~l~i~V~d~ 108 (763)
...+.|.|+|++|++|+..+..|.+||||++++++ .+++|++++++.||.|||+|.|.+.. ....|.|+|||+
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~-~~~~L~~~V~d~ 83 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLP-QRHRILFEVFDE 83 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECT-TTCEEEEEEEEC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcC-CCCEEEEEEEEC
Confidence 45689999999999999999889999999999986 57899999999999999999999975 357899999999
Q ss_pred CCC-CCeeeEEEEEEccccCCCCCC-CCCCcCeEEEeecCCC-CccceEEEEEEEEccc
Q 004297 109 DFV-KDDFMGRVLFDLNEIPKRVPP-DSPLAPQWYRLEDRKG-DKVRGELMLAVWMGTQ 164 (763)
Q Consensus 109 ~~~-~d~~lG~~~i~l~~l~~~~~~-~~~~~~~w~~L~~~~~-~~~~G~i~l~~~~~~~ 164 (763)
+.. ++++||++.|+|.++...... +.....+||+|....+ .+..|+|.+++.|.+.
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 998 899999999999999866432 2233458999997653 3467999999999875
No 20
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=1e-17 Score=155.13 Aligned_cols=120 Identities=23% Similarity=0.325 Sum_probs=103.2
Q ss_pred ceeceEEEEEEEccCccccCCCcccCCCCCcchhhhccCCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEEC---CE
Q 004297 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYG---QK 397 (763)
Q Consensus 321 ~~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~---~~ 397 (763)
...|+|.+.+.+. +..+.|.|+|++|+||+++ +..|.+||||++.+. ..
T Consensus 10 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~ 61 (141)
T 2d8k_A 10 ENLGRIQFSVGYN-------------------------FQESTLTVKIMKAQELPAK---DFSGTSDPFVKIYLLPDKKH 61 (141)
T ss_dssp CCCCEEEEEEEEC-------------------------SSSCCEEEEEEEEESCCCC---SSSSCCCEEEEEEEESCCSS
T ss_pred ceeeEEEEEEEEe-------------------------CCCCEEEEEEEEeECCCCC---CCCCCCCcEEEEEEECCCCc
Confidence 3479999888762 3348999999999999987 556899999999983 45
Q ss_pred EEeeeeecCCCCCccccEEEEEeeC----CCcEEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEee
Q 004297 398 WVRTRTIIDSPTPKWNEQYTWEVFD----PCTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPL 473 (763)
Q Consensus 398 ~~~T~~~~~t~~P~wne~~~~~v~~----~~~~l~i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L 473 (763)
.++|+++++++||+|||.|.|.+.. ....|.|+|||++.++ +|++||++.|+|.++..+.....||+|
T Consensus 62 ~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~--------~~~~iG~~~i~l~~l~~~~~~~~W~~L 133 (141)
T 2d8k_A 62 KLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFS--------RNDPIGEVSIPLNKVDLTQMQTFWKDL 133 (141)
T ss_dssp EEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCSSS--------SCEEEEEEEEETTTSCTTSCEEEEECC
T ss_pred cEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCCCC--------CCcEEEEEEEEhhhhcCCCCccEEEEC
Confidence 7999999999999999999998642 3578999999999876 889999999999999988888999999
Q ss_pred eee
Q 004297 474 LVL 476 (763)
Q Consensus 474 ~~~ 476 (763)
...
T Consensus 134 ~~~ 136 (141)
T 2d8k_A 134 KPS 136 (141)
T ss_dssp EEC
T ss_pred cCC
Confidence 764
No 21
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.76 E-value=3.3e-18 Score=159.43 Aligned_cols=121 Identities=24% Similarity=0.343 Sum_probs=101.8
Q ss_pred CceeEEEEEEEEccccCCCCC----------CCCCCcEEEEEECCEE-EeeecccCCCCCccccceEEEEeeCCCCCeEE
Q 004297 197 PKLWYLRVNVIEAQDLQPTDK----------GRFPEVYVKAQLGNQA-LRTRVSASRTINPMWNEDLMFVAAEPFEEHLI 265 (763)
Q Consensus 197 p~~g~L~V~i~~a~~L~~~~~----------~~~~dpyv~v~l~~~~-~kT~~~~~~t~nP~wne~f~f~~~~~~~~~L~ 265 (763)
...|.|+|+|++|++|+++|. .+.+||||++.++++. .+|+++++ |+||.|||+|.|.+.+ ...|.
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~k-tlnP~WNE~F~f~v~~--~~~L~ 102 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQK-TNKPTYNEEFCANVTD--GGHLE 102 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSS-CSSCEEEEEEEEEEEE--ECEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCC-CCCCccCcEEEEEcCC--CCEEE
Confidence 456899999999999998873 3678999999999865 69999877 9999999999999875 46899
Q ss_pred EEEEEccCCCCCceeEEEEEeccccccccCCCCCCceeEEcccccccccccccCCceeceEEEEEEEcc
Q 004297 266 LTVEDRVAPNKDEVLGKCMIPLQYVDKRLDHKPVNTRWYNLEKHIVVEGEKKKDTKFASRIHMRICLEG 334 (763)
Q Consensus 266 i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~w~~L~~~~~~~~~~~~~~~~~G~l~l~l~~~~ 334 (763)
|+|||++..++|++||++.|++.++....+.......||+|+. .|+|++++++.|
T Consensus 103 ~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--------------~G~i~l~l~~~g 157 (157)
T 2fk9_A 103 LAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--------------EGKVFVVITLTG 157 (157)
T ss_dssp EEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--------------SCEEEEEEEEC-
T ss_pred EEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--------------CcEEEEEEEEEC
Confidence 9999999999999999999999998754222344789999975 599999998753
No 22
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.76 E-value=4.4e-18 Score=159.66 Aligned_cols=119 Identities=21% Similarity=0.303 Sum_probs=103.3
Q ss_pred ceeceEEEEEEEccCccccCCCcccCCCCCcchhhhccCCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE---CCE
Q 004297 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY---GQK 397 (763)
Q Consensus 321 ~~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~---~~~ 397 (763)
...|+|++.+.+. +..+.|.|+|++|+||+++ +..|.+||||++.+ +.+
T Consensus 26 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~ 77 (152)
T 1rsy_A 26 EKLGKLQYSLDYD-------------------------FQNNQLLVGIIQAAELPAL---DMGGTSDPYVKVFLLPDKKK 77 (152)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCC---STTSCCCEEEEEEEETTCCS
T ss_pred CCceEEEEEEEEe-------------------------CCCCEEEEEEEEeECCCCc---cCCCCcCeEEEEEEEcCCCc
Confidence 3468998888762 3348999999999999987 55689999999998 445
Q ss_pred EEeeeeecCCCCCccccEEEEEeeC---CCcEEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEeee
Q 004297 398 WVRTRTIIDSPTPKWNEQYTWEVFD---PCTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLL 474 (763)
Q Consensus 398 ~~~T~~~~~t~~P~wne~~~~~v~~---~~~~l~i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~ 474 (763)
.++|+++++++||+|||.|.|.+.. ....|.|+|||++.++ +|++||++.|+|.++..+....+||+|.
T Consensus 78 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~--------~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 149 (152)
T 1rsy_A 78 KFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFS--------KHDIIGEFKVPMNTVDFGHVTEEWRDLQ 149 (152)
T ss_dssp CEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSS--------CCEEEEEEEEEGGGCCCSSCEEEEEECB
T ss_pred eEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCCCC--------CCcEEEEEEEEchhccCCCCcceEEECC
Confidence 7899999999999999999998874 3679999999999876 7999999999999998888889999996
Q ss_pred e
Q 004297 475 V 475 (763)
Q Consensus 475 ~ 475 (763)
.
T Consensus 150 ~ 150 (152)
T 1rsy_A 150 S 150 (152)
T ss_dssp C
T ss_pred C
Confidence 4
No 23
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.75 E-value=1.5e-18 Score=162.21 Aligned_cols=122 Identities=16% Similarity=0.265 Sum_probs=103.0
Q ss_pred ceeceEEEEEEEccCccccCCCcccCCCCCcchhhhccCCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEEC-----
Q 004297 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYG----- 395 (763)
Q Consensus 321 ~~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~----- 395 (763)
...|+|.+++++. +..+.|.|.|++|+||++++. ..|.+||||++.++
T Consensus 7 ~~~G~l~~sl~y~-------------------------~~~~~L~V~v~~a~~L~~~d~--~~~~~dpyv~v~l~~~~~~ 59 (148)
T 3fdw_A 7 FVTGRIAFSLKYE-------------------------QQTQSLVVHVKECHQLAYADE--AKKRSNPYVKTYLLPDKSR 59 (148)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCSBT--TTTBCCEEEEEEEETCCSG
T ss_pred ccceEEEEEEEEe-------------------------CCCCEEEEEEEEecCCCCccc--CCCCCCeEEEEEEEcCCcc
Confidence 4579999988863 334899999999999998731 46889999999985
Q ss_pred CEEEeeeeecCCCCCccccEEEEEeeCC---CcEEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEe
Q 004297 396 QKWVRTRTIIDSPTPKWNEQYTWEVFDP---CTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYP 472 (763)
Q Consensus 396 ~~~~~T~~~~~t~~P~wne~~~~~v~~~---~~~l~i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~ 472 (763)
...++|+++++++||+|||.|.|.+... ...|.|+|||++.++ +|++||++.|+|.++..+.....||+
T Consensus 60 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~~~--------~~~~iG~~~i~l~~l~~~~~~~~W~~ 131 (148)
T 3fdw_A 60 QGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGRFG--------RNTFLGEAEIQMDSWKLDKKLDHCLP 131 (148)
T ss_dssp GGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECGGG--------CEEEEEEEEEEHHHHHHHCCSEEEEE
T ss_pred cCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCCCc--------CCcEEEEEEEEcccccccCCccceEE
Confidence 3478999999999999999999998753 457999999999876 89999999999999987777789999
Q ss_pred eeeeC
Q 004297 473 LLVLY 477 (763)
Q Consensus 473 L~~~~ 477 (763)
|....
T Consensus 132 L~~~~ 136 (148)
T 3fdw_A 132 LHGKI 136 (148)
T ss_dssp CBCC-
T ss_pred CcCcc
Confidence 97644
No 24
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.75 E-value=2.8e-18 Score=160.85 Aligned_cols=117 Identities=19% Similarity=0.181 Sum_probs=100.4
Q ss_pred eeceEEEEEEEccCccccCCCcccCCCCCcchhhhccCCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC-----
Q 004297 322 FASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ----- 396 (763)
Q Consensus 322 ~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~----- 396 (763)
..|+|++.+.+. +..+.|.|.|++|+||+++ |..|.+||||++.+.+
T Consensus 28 ~~G~l~~sl~y~-------------------------~~~~~L~V~Vi~a~~L~~~---d~~g~sDPyVkv~l~~~~~~~ 79 (155)
T 2z0u_A 28 GATRIQIALKYD-------------------------EKNKQFAILIIQLSNLSAL---LQQQDQKVNIRVAVLPCSEST 79 (155)
T ss_dssp CCEEEEEEEEEE-------------------------TTTTEEEEEEEEEECGGGT---CCSCCSEEEEEEEEESCSCHH
T ss_pred CcEEEEEEEEEc-------------------------CCCCEEEEEEEEccCcCCc---ccCCCCCEEEEEEEecCCCCC
Confidence 468888888762 3348999999999999987 5678999999999854
Q ss_pred -EEEeeeeecCCCCCccccEEEEEeeCC---CcEEEEEEEeCCCCCCCCCCCCCCCCccEEEEEeccccc-CCCeEeeeE
Q 004297 397 -KWVRTRTIIDSPTPKWNEQYTWEVFDP---CTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLE-TDRVYTHSY 471 (763)
Q Consensus 397 -~~~~T~~~~~t~~P~wne~~~~~v~~~---~~~l~i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~-~~~~~~~~~ 471 (763)
..+||+++++|+||+|||.|.|.+... ...|.|+|||+|..+ +|++||++.|+|.++. .+....+||
T Consensus 80 ~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~~~--------~~d~iG~~~i~l~~l~~~~~~~~~W~ 151 (155)
T 2z0u_A 80 TCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDRSH--------LEECLGGAQISLAEVCRSGERSTRWY 151 (155)
T ss_dssp HHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEECTTS--------CEEEEEEEEEECTTSCTTCCCEEEEE
T ss_pred ccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECCCCC--------CCcEEEEEEEEHHHccCCCCccccce
Confidence 269999999999999999999998742 568999999999876 8999999999999995 466778999
Q ss_pred eee
Q 004297 472 PLL 474 (763)
Q Consensus 472 ~L~ 474 (763)
+|.
T Consensus 152 ~L~ 154 (155)
T 2z0u_A 152 NLL 154 (155)
T ss_dssp EEB
T ss_pred Ecc
Confidence 985
No 25
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.75 E-value=1.1e-17 Score=153.13 Aligned_cols=116 Identities=20% Similarity=0.375 Sum_probs=98.0
Q ss_pred cCceeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeeeCCCCCCeeccEEEEE-ec--
Q 004297 23 TGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKM-----GNYKGTTRHFEKKTNPEWNQVFAFS-KD-- 94 (763)
Q Consensus 23 ~~~~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~-----~~~~~kT~~~~~t~nP~Wne~f~f~-v~-- 94 (763)
++..+.++|++. .+.|.|+|++|++|+. +..+.+||||++++ ...+++|+++++|.||+|||+|.|. +.
T Consensus 7 ~~~~~~~~~~~~--~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~ 83 (134)
T 2b3r_A 7 GSGAVKLSVSYR--NGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKE 83 (134)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHH
T ss_pred ccEEEEEEEeec--CCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHH
Confidence 345677777774 4799999999999997 67889999999999 3467899999999999999999999 64
Q ss_pred CCCCceEEEEEEeCCCC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecC
Q 004297 95 RIQSSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDR 146 (763)
Q Consensus 95 ~~~~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 146 (763)
++....|.|+|||++.. ++++||++.++|.++..+. ...+||+|.+.
T Consensus 84 ~l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~~~W~~L~~~ 131 (134)
T 2b3r_A 84 TLRQRELQLSVLSAESLRENFFLGGITLPLKDFNLSK-----ETVKWYQLTAA 131 (134)
T ss_dssp HHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTS-----CEEEEEECBC-
T ss_pred HhCcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCC-----CcceeEECCCc
Confidence 33467899999999998 8999999999999997643 36799999875
No 26
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.75 E-value=7.9e-18 Score=153.96 Aligned_cols=123 Identities=22% Similarity=0.266 Sum_probs=98.4
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC--EEEeeeeecCCCCCccccEEEEEeeCCCcEEEEEEEeCCCCCC
Q 004297 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ--KWVRTRTIIDSPTPKWNEQYTWEVFDPCTVITIGVFDNCHLHG 439 (763)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~--~~~~T~~~~~t~~P~wne~~~~~v~~~~~~l~i~V~d~~~~~~ 439 (763)
..|+|+|++|+||+++ |..|++||||++.+++ +.++|+++++++||+|||.|.|.+.++. .|.|+|||++..+.
T Consensus 5 ~~L~V~v~~a~~L~~~---d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~~ 80 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKK---DFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIHK 80 (132)
T ss_dssp EEEEEEEEEEESCCCC---STTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTTS
T ss_pred EEEEEEEEEeECCCCC---CCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCCC
Confidence 6899999999999987 5668999999999965 7899999999999999999999998764 49999999998750
Q ss_pred CCCCCCCCCCccEEEEEecccc-cCCCeEeeeEeeeeeCCCC-cccceEEEEEEEE
Q 004297 440 GDKAGGARDSRIGKVRIRLSTL-ETDRVYTHSYPLLVLYPNG-VKKMGEIHLAVRF 493 (763)
Q Consensus 440 ~~~~~~~~d~~lG~v~i~l~~l-~~~~~~~~~~~L~~~~~~g-~~~~G~i~l~~~~ 493 (763)
...|++||.+.|++.++ ..+.....|++|....+.+ .+..|+|++++..
T Consensus 81 -----~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 81 -----KQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp -----STTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred -----CCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 01278999999999988 2222235789997653322 2347999998764
No 27
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.74 E-value=8.6e-18 Score=152.39 Aligned_cols=115 Identities=27% Similarity=0.443 Sum_probs=98.3
Q ss_pred eeEEEEEEEEeecCCCC---CCCCCCCcEEEEEECC---eeeeeeeeCCCCCCeeccEEEEEecCCCCceEEEEEEeCCC
Q 004297 37 MQYLYVRVVKAKDLPPK---DVTGSCDPYVEVKMGN---YKGTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDF 110 (763)
Q Consensus 37 ~~~L~v~v~~a~~L~~~---~~~~~~dPyv~v~~~~---~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~~l~i~V~d~~~ 110 (763)
.+.|.|+|++|++|+.+ +..|.+||||++++++ ++++|++++++.||+|||+|.|.+.......|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 36899999999999984 5568999999999986 68899999999999999999999965567899999999998
Q ss_pred CCCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCCCccceEEEEEEE
Q 004297 111 VKDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVW 160 (763)
Q Consensus 111 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~ 160 (763)
.++++||++.++|.++..+. ....|++|... ..|.|.+++.
T Consensus 82 ~~~~~iG~~~i~l~~l~~~~-----~~~~~~~L~~~----~~g~i~~~le 122 (126)
T 1rlw_A 82 VMDETLGTATFTVSSMKVGE-----KKEVPFIFNQV----TEMVLEMSLE 122 (126)
T ss_dssp SCCEEEEEEEEEGGGSCTTC-----EEEEEEEETTT----EEEEEEEEEE
T ss_pred CCCceeEEEEEEHHHccCCC-----cEEEEEEcCCC----ceEEEEEEEE
Confidence 88999999999999997553 35689999862 2467776654
No 28
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=7e-18 Score=153.69 Aligned_cols=115 Identities=20% Similarity=0.388 Sum_probs=94.4
Q ss_pred eeceEEEEEEEccCccccCCCcccCCCCCcchhhhccCCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE-----CC
Q 004297 322 FASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY-----GQ 396 (763)
Q Consensus 322 ~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~-----~~ 396 (763)
..|+|.+++.+. +..+.|.|+|++|+||+++ +..|++||||++.+ +.
T Consensus 3 ~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~---d~~~~~dpyv~v~~~~~~~~~ 54 (129)
T 2bwq_A 3 LSGQLSIKLWFD-------------------------KVGHQLIVTILGAKDLPSR---EDGRPRNPYVKIYFLPDRSDK 54 (129)
T ss_dssp CCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCC---TTSCCBCEEEEEEEESSCSGG
T ss_pred eeEEEEEEEEEc-------------------------cCCCEEEEEEEEeeCCCCC---CCCCCCCCEEEEEEecCCCCC
Confidence 368888888763 2338999999999999987 56689999999998 45
Q ss_pred EEEeeeeecCCCCCccccEEEEEeeC----CCcEEEEEEEeCCCCCCCCCCCCCC--CCccEEEEEecccccCCCeEeee
Q 004297 397 KWVRTRTIIDSPTPKWNEQYTWEVFD----PCTVITIGVFDNCHLHGGDKAGGAR--DSRIGKVRIRLSTLETDRVYTHS 470 (763)
Q Consensus 397 ~~~~T~~~~~t~~P~wne~~~~~v~~----~~~~l~i~V~d~~~~~~~~~~~~~~--d~~lG~v~i~l~~l~~~~~~~~~ 470 (763)
..++|+++++++||+|||.|.|.+.. ....|.|+|||++..+ + |++||++.|+|.++.... ..+|
T Consensus 55 ~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~~~--------~~~~~~lG~~~i~l~~l~~~~-~~~W 125 (129)
T 2bwq_A 55 NKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVR--------EEESEFLGEILIELETALLDD-EPHW 125 (129)
T ss_dssp GEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC---------------CEEEEEEEEEGGGCCCSS-CEEE
T ss_pred cceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECCcCc--------CcCCceeEEEEEEccccCCCc-CCcc
Confidence 68999999999999999999999642 2569999999999875 5 899999999999987654 7899
Q ss_pred Eee
Q 004297 471 YPL 473 (763)
Q Consensus 471 ~~L 473 (763)
|+|
T Consensus 126 ~~L 128 (129)
T 2bwq_A 126 YKL 128 (129)
T ss_dssp EEC
T ss_pred EEC
Confidence 998
No 29
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.74 E-value=6.4e-18 Score=156.91 Aligned_cols=119 Identities=21% Similarity=0.308 Sum_probs=103.1
Q ss_pred ceeceEEEEEEEccCccccCCCcccCCCCCcchhhhccCCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE---CCE
Q 004297 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY---GQK 397 (763)
Q Consensus 321 ~~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~---~~~ 397 (763)
...|+|.+.+++. +..+.|.|+|++|+||+++ +..|.+||||++.+ +.+
T Consensus 18 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~l~~~~~~ 69 (143)
T 3f04_A 18 EKLGKLQYSLDYD-------------------------FQNNQLLVGIIQAAELPAL---DMGGTSDPYVKVFLLPDKKK 69 (143)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEECCCCB---GGGBCCCEEEEEEEESCCSC
T ss_pred cCeEEEEEEEEEe-------------------------CCCCEEEEEEEEecCCCCC---CCCCCcCcEEEEEEECCCCc
Confidence 4478888888762 3348999999999999987 44588999999998 556
Q ss_pred EEeeeeecCCCCCccccEEEEEeeCC---CcEEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEeee
Q 004297 398 WVRTRTIIDSPTPKWNEQYTWEVFDP---CTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLL 474 (763)
Q Consensus 398 ~~~T~~~~~t~~P~wne~~~~~v~~~---~~~l~i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~ 474 (763)
.++|+++++++||+|||.|.|.+... ...|.|+|||++.++ +|++||++.|+|.++..+....+||+|.
T Consensus 70 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~--------~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 70 KFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFS--------KHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp CEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSS--------CCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred cEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCCCC--------CCceEEEEEEEHHHccCCCCcceEEECc
Confidence 79999999999999999999998742 479999999999876 8999999999999999998889999995
Q ss_pred e
Q 004297 475 V 475 (763)
Q Consensus 475 ~ 475 (763)
.
T Consensus 142 ~ 142 (143)
T 3f04_A 142 S 142 (143)
T ss_dssp C
T ss_pred C
Confidence 3
No 30
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.74 E-value=3.9e-18 Score=159.83 Aligned_cols=116 Identities=16% Similarity=0.231 Sum_probs=96.6
Q ss_pred eeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC---e---eeeeeeeCCCCCCeeccEEEEEecC--CC
Q 004297 26 KLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN---Y---KGTTRHFEKKTNPEWNQVFAFSKDR--IQ 97 (763)
Q Consensus 26 ~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~---~---~~kT~~~~~t~nP~Wne~f~f~v~~--~~ 97 (763)
++.+...+....+.|.|+|++|++|+.++..|.+||||++++.+ . ++||+++++|+||+|||+|.|.+.. +.
T Consensus 31 ~l~~sl~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~ 110 (155)
T 2z0u_A 31 RIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALH 110 (155)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHH
T ss_pred EEEEEEEEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhC
Confidence 34444444456789999999999999999999999999999975 2 7899999999999999999999853 23
Q ss_pred CceEEEEEEeCCCC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeec
Q 004297 98 SSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLED 145 (763)
Q Consensus 98 ~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~ 145 (763)
...|.|+|||++.. ++++||++.++|.++... .....+||+|.+
T Consensus 111 ~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~----~~~~~~W~~L~~ 155 (155)
T 2z0u_A 111 QKTLRVDVCTTDRSHLEECLGGAQISLAEVCRS----GERSTRWYNLLS 155 (155)
T ss_dssp HCEEEEEEEEECTTSCEEEEEEEEEECTTSCTT----CCCEEEEEEEBC
T ss_pred cCEEEEEEEECCCCCCCcEEEEEEEEHHHccCC----CCccccceEccC
Confidence 57899999999998 899999999999999632 123679999863
No 31
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.73 E-value=1.8e-17 Score=158.22 Aligned_cols=123 Identities=13% Similarity=0.160 Sum_probs=101.1
Q ss_pred CcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCEEEeeeeecCCCCCccccEEEEEeeCCCcEEEEEEEeCCCCCC
Q 004297 360 SIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTIIDSPTPKWNEQYTWEVFDPCTVITIGVFDNCHLHG 439 (763)
Q Consensus 360 ~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~~~~~T~~~~~t~~P~wne~~~~~v~~~~~~l~i~V~d~~~~~~ 439 (763)
..+.|+|+|++|++|++. +..+.+||||++.++++.+||+++++++||+|||.|.|.+. +...|.|+|||++.++
T Consensus 34 ~~~~L~V~V~~A~~L~~~---~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~- 108 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENK---KNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLK- 108 (173)
T ss_dssp CCEEEEEEEEEEEECCCC-----CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSSS-
T ss_pred CceEEEEEEEEeECCCCc---ccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCCC-
Confidence 458999999999999843 22345999999999999999999999999999999999985 5889999999999876
Q ss_pred CCCCCCCCCCccEEEEEecccccCC---C--eEeeeEeeeeeCCCCcccceEEEEEEEEee
Q 004297 440 GDKAGGARDSRIGKVRIRLSTLETD---R--VYTHSYPLLVLYPNGVKKMGEIHLAVRFTC 495 (763)
Q Consensus 440 ~~~~~~~~d~~lG~v~i~l~~l~~~---~--~~~~~~~L~~~~~~g~~~~G~i~l~~~~~~ 495 (763)
+|++||++.|+|.++..+ . ....|++|..... +.+..|+|.+.+.+..
T Consensus 109 -------~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~-~~~~~G~L~v~l~~l~ 161 (173)
T 2nq3_A 109 -------SDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKE-PTETIGDLSICLDGLQ 161 (173)
T ss_dssp -------CCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSC-TTSEEEEEEEEEESEE
T ss_pred -------CCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCC-CCcccEEEEEEEeeee
Confidence 899999999999998532 1 2367999987532 3345799999887653
No 32
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=1.3e-17 Score=154.44 Aligned_cols=119 Identities=19% Similarity=0.350 Sum_probs=100.5
Q ss_pred ceeceEEEEEEEccCccccCCCcccCCCCCcchhhhccCCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE-----C
Q 004297 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY-----G 395 (763)
Q Consensus 321 ~~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~-----~ 395 (763)
...|+|.+.+.+. +..+.|.|.|++|+||+++ +..|.+||||++.+ +
T Consensus 5 ~~~G~i~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~ 56 (141)
T 1v27_A 5 SSGGQLSIKLWFD-------------------------KVGHQLIVTILGAKDLPSR---EDGRPRNPYVKIYFLPDRSD 56 (141)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCC---SSSCCCCEEEECCCSSCCSS
T ss_pred CcccEEEEEEEEe-------------------------CCCCEEEEEEEEccCCCCc---CCCCCCCCEEEEEEecCCCC
Confidence 3479999988863 2338999999999999987 55689999999988 4
Q ss_pred CEEEeeeeecCCCCCccccEEEEEeeC----CCcEEEEEEEeCCCCCCCCCCCCCC--CCccEEEEEecccccCCCeEee
Q 004297 396 QKWVRTRTIIDSPTPKWNEQYTWEVFD----PCTVITIGVFDNCHLHGGDKAGGAR--DSRIGKVRIRLSTLETDRVYTH 469 (763)
Q Consensus 396 ~~~~~T~~~~~t~~P~wne~~~~~v~~----~~~~l~i~V~d~~~~~~~~~~~~~~--d~~lG~v~i~l~~l~~~~~~~~ 469 (763)
...++|+++++++||+|||.|.|.+.. ....|.|+|||++..+ + |++||++.|+|.++..+. ..+
T Consensus 57 ~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~--------~~~~~~lG~~~i~l~~l~~~~-~~~ 127 (141)
T 1v27_A 57 KNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVR--------EEESEFLGEILIELETALLDD-EPH 127 (141)
T ss_dssp SSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCSSS--------SCCBCCCEEEEEEGGGCCCSS-EEE
T ss_pred CcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCCCc--------CCCCceEEEEEEEccccCCCC-CCc
Confidence 567999999999999999999999542 2579999999999875 4 899999999999987655 789
Q ss_pred eEeeeee
Q 004297 470 SYPLLVL 476 (763)
Q Consensus 470 ~~~L~~~ 476 (763)
||+|...
T Consensus 128 W~~L~~~ 134 (141)
T 1v27_A 128 WYKLQTH 134 (141)
T ss_dssp EEECBCC
T ss_pred eEECccc
Confidence 9999764
No 33
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=1.5e-17 Score=151.47 Aligned_cols=111 Identities=30% Similarity=0.597 Sum_probs=91.4
Q ss_pred eeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeeeCCCCCCeeccEEEEEec---CCC
Q 004297 26 KLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKM-----GNYKGTTRHFEKKTNPEWNQVFAFSKD---RIQ 97 (763)
Q Consensus 26 ~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~-----~~~~~kT~~~~~t~nP~Wne~f~f~v~---~~~ 97 (763)
.++..|+ ...+.|.|+|++|++|+..+..|.+||||++++ +..+++|++++++.||+|||+|.|.+. ++.
T Consensus 8 ~~~l~y~--~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~ 85 (129)
T 2bwq_A 8 SIKLWFD--KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFR 85 (129)
T ss_dssp EEEEEEE--TTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGG
T ss_pred EEEEEEc--cCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhc
Confidence 4444554 566899999999999999998999999999999 346889999999999999999999952 334
Q ss_pred CceEEEEEEeCCCC-C--CeeeEEEEEEccccCCCCCCCCCCcCeEEEee
Q 004297 98 SSVLEVTVKDKDFV-K--DDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLE 144 (763)
Q Consensus 98 ~~~l~i~V~d~~~~-~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~ 144 (763)
...|.|+|||++.. + +++||++.++|.++.... ..+||+|+
T Consensus 86 ~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~------~~~W~~Lq 129 (129)
T 2bwq_A 86 ERMLEITLWDQARVREEESEFLGEILIELETALLDD------EPHWYKLQ 129 (129)
T ss_dssp GCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS------CEEEEECC
T ss_pred CCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc------CCccEECc
Confidence 67999999999988 5 999999999999987642 57899984
No 34
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=1.1e-17 Score=154.98 Aligned_cols=120 Identities=17% Similarity=0.220 Sum_probs=99.4
Q ss_pred ceeceEEEEEEEccCccccCCCcccCCCCCcchhhhccCCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC----
Q 004297 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ---- 396 (763)
Q Consensus 321 ~~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~---- 396 (763)
...|+|++.+.+. +..+.|.|.|++|+||+++ +..| +||||++.+.+
T Consensus 8 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~---d~~g-~dpyv~v~l~~~~~~ 58 (142)
T 2dmg_A 8 SPLGQIQLTIRHS-------------------------SQRNKLIVVVHACRNLIAF---SEDG-SDPYVRMYLLPDKRR 58 (142)
T ss_dssp CSSCEEEEEEEEE-------------------------TTTTEEEEEEEEEECCCCS---STTC-CCEEEEEEEESCCCS
T ss_pred CCcceEEEEEEEe-------------------------CCCCEEEEEEEEeECCCCC---CCCC-CCeeEEEEEEcCCCC
Confidence 4579999988763 2348999999999999987 5567 99999998832
Q ss_pred -EEEeeeeecCCCCCccccEEEEEeeC---CCcEEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEe
Q 004297 397 -KWVRTRTIIDSPTPKWNEQYTWEVFD---PCTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYP 472 (763)
Q Consensus 397 -~~~~T~~~~~t~~P~wne~~~~~v~~---~~~~l~i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~ 472 (763)
..++|+++++++||+|||.|.|.+.. ....|.|+|||++.++ ...|++||++.|+|.++..+....+||+
T Consensus 59 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~------~~~~~~iG~~~i~l~~~~~~~~~~~W~~ 132 (142)
T 2dmg_A 59 SGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFL------SKDKGLLGKVLVALASEELAKGWTQWYD 132 (142)
T ss_dssp SSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCSS------CCSCCCCEEEEEECCCSTTTTCBCCBCC
T ss_pred CCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCcc------ccCCcEEEEEEEecccccccccccceee
Confidence 56899999999999999999999864 2458999999999764 0025799999999999987777889999
Q ss_pred eee
Q 004297 473 LLV 475 (763)
Q Consensus 473 L~~ 475 (763)
|..
T Consensus 133 L~~ 135 (142)
T 2dmg_A 133 LTE 135 (142)
T ss_dssp CBC
T ss_pred ccC
Confidence 975
No 35
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.73 E-value=8.6e-18 Score=157.85 Aligned_cols=119 Identities=24% Similarity=0.377 Sum_probs=99.4
Q ss_pred ceeceEEEEEEEccCccccCCCcccCCCCCcchhhhccCCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE-----C
Q 004297 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY-----G 395 (763)
Q Consensus 321 ~~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~-----~ 395 (763)
...|++.+++++. +..+.|.|+|++|+||+++ + .|.+||||++.+ +
T Consensus 11 ~~~G~~~lsL~y~-------------------------~~~~~L~V~v~~a~~L~~~---d-~g~~Dpyv~v~l~~~~~~ 61 (153)
T 3fbk_A 11 KVQGAGQLRLSID-------------------------AQDRVLLLHIIEGKGLISK---Q-PGTCDPYVKISLIPEDSR 61 (153)
T ss_dssp --CCCCEEEEEEE-------------------------ESSSEEEEEEEEEESCCCC---S-SSCCCEEEEEEEESCSCC
T ss_pred CCCCEEEEEEEEE-------------------------CCCCEEEEEEEEeeCCCCC---C-CCCCCEEEEEEEEcCCCC
Confidence 4578888888763 3348999999999999987 4 488999999988 3
Q ss_pred CEEEeeeeecCCCCCccccEEEEEee--CCCcEEEEEEEeCCCCCCCCCCCCCC-CCccEEEEEecccccC-CCeEeeeE
Q 004297 396 QKWVRTRTIIDSPTPKWNEQYTWEVF--DPCTVITIGVFDNCHLHGGDKAGGAR-DSRIGKVRIRLSTLET-DRVYTHSY 471 (763)
Q Consensus 396 ~~~~~T~~~~~t~~P~wne~~~~~v~--~~~~~l~i~V~d~~~~~~~~~~~~~~-d~~lG~v~i~l~~l~~-~~~~~~~~ 471 (763)
...++|+++++++||+|||.|.|.+. +....|.|+|||++.++ + |++||++.|+|.++.. +.....||
T Consensus 62 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~~--------~~d~~lG~~~i~l~~l~~~~~~~~~W~ 133 (153)
T 3fbk_A 62 LRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQS--------RQSGLIGCMSFGVKSLLTPDKEISGWY 133 (153)
T ss_dssp TTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCSSG--------GGCEEEEEEEEEHHHHTC--CCEEEEE
T ss_pred ccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCCCC--------CCCcEEEEEEEEHHHhcCCCCccccEE
Confidence 35689999999999999999999984 45567999999999865 5 8999999999999985 77889999
Q ss_pred eeeee
Q 004297 472 PLLVL 476 (763)
Q Consensus 472 ~L~~~ 476 (763)
+|...
T Consensus 134 ~L~~~ 138 (153)
T 3fbk_A 134 YLLGE 138 (153)
T ss_dssp ECBCT
T ss_pred ECCCh
Confidence 99763
No 36
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.73 E-value=1.2e-17 Score=153.46 Aligned_cols=117 Identities=20% Similarity=0.364 Sum_probs=99.1
Q ss_pred ceeEEEEEEEEeecCCCCCCCCC-----------CCcEEEEEECCee-eeeeeeCCCCCCeeccEEEEEecCCCCceEEE
Q 004297 36 QMQYLYVRVVKAKDLPPKDVTGS-----------CDPYVEVKMGNYK-GTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEV 103 (763)
Q Consensus 36 ~~~~L~v~v~~a~~L~~~~~~~~-----------~dPyv~v~~~~~~-~kT~~~~~t~nP~Wne~f~f~v~~~~~~~l~i 103 (763)
..+.|.|+|++|++|+..|..+. +||||++++++++ .+|+++.+|.||+|||+|.|.+.+. ..|.|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L~~ 81 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG--RKIEL 81 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE--CEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC--CEEEE
Confidence 35799999999999998774433 9999999998864 6899999999999999999998753 78999
Q ss_pred EEEeCCCC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCCCccceEEEEEEEEcc
Q 004297 104 TVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVWMGT 163 (763)
Q Consensus 104 ~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~~~ 163 (763)
+|||++.. +|++||++.+++.++..+.. .....|++|+. .|+|++.+.|..
T Consensus 82 ~V~d~d~~~~dd~iG~~~i~l~~l~~~~~---~~~~~w~~L~~------~G~i~l~l~~~~ 133 (136)
T 1gmi_A 82 AVFHDAPIGYDDFVANCTIQFEELLQNGS---RHFEDWIDLEP------EGKVYVIIDLSG 133 (136)
T ss_dssp EEEECCSSSSCEEEEEEEEEHHHHTSTTC---SEEEEEEECBS------SCEEEEEEEEEE
T ss_pred EEEeCCCCCCCCEEEEEEEEHHHhcccCC---CCccEEEEcCC------CeEEEEEEEEEe
Confidence 99999988 89999999999999986531 12468999875 489999998754
No 37
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=2.3e-17 Score=154.75 Aligned_cols=116 Identities=29% Similarity=0.432 Sum_probs=98.2
Q ss_pred eeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeeeeeeeeCCCCCCeeccEEEEEecC--CCCce
Q 004297 26 KLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMG---NYKGTTRHFEKKTNPEWNQVFAFSKDR--IQSSV 100 (763)
Q Consensus 26 ~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~---~~~~kT~~~~~t~nP~Wne~f~f~v~~--~~~~~ 100 (763)
++.+...+....+.|.|+|++|++|+..+..+.+||||++++. .++++|++++++.||+|||+|.|.+.. +....
T Consensus 30 ~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 109 (152)
T 1rsy_A 30 KLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKT 109 (152)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCE
T ss_pred EEEEEEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCE
Confidence 4444444445678999999999999999988999999999994 367899999999999999999998843 24578
Q ss_pred EEEEEEeCCCC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecC
Q 004297 101 LEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDR 146 (763)
Q Consensus 101 l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 146 (763)
|.|+|||++.. ++++||++.++|.++..+. ...+||+|.+.
T Consensus 110 L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~ 151 (152)
T 1rsy_A 110 LVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQSA 151 (152)
T ss_dssp EEEEEEECCSSSCCEEEEEEEEEGGGCCCSS-----CEEEEEECBCC
T ss_pred EEEEEEECCCCCCCcEEEEEEEEchhccCCC-----CcceEEECCCC
Confidence 99999999998 8999999999999997553 36799999864
No 38
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=1.9e-17 Score=153.31 Aligned_cols=117 Identities=28% Similarity=0.470 Sum_probs=99.3
Q ss_pred eeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeeeeeeeeCCCCCCeeccEEEEEec---CCCCc
Q 004297 26 KLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMG---NYKGTTRHFEKKTNPEWNQVFAFSKD---RIQSS 99 (763)
Q Consensus 26 ~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~---~~~~kT~~~~~t~nP~Wne~f~f~v~---~~~~~ 99 (763)
++.+...+..+.+.|.|+|++|++|+..+..+.+||||++++. .++++|++++++.||+|||+|.|.+. +....
T Consensus 14 ~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~ 93 (141)
T 2d8k_A 14 RIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQR 93 (141)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTS
T ss_pred EEEEEEEEeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccC
Confidence 4444545556778999999999999999988999999999995 36789999999999999999999852 22357
Q ss_pred eEEEEEEeCCCC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCC
Q 004297 100 VLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (763)
Q Consensus 100 ~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (763)
.|.|+|||++.. ++++||++.++|.++..+. ....||+|.+..
T Consensus 94 ~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 137 (141)
T 2d8k_A 94 ILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQ-----MQTFWKDLKPSG 137 (141)
T ss_dssp EEEEEEEECCSSSSCEEEEEEEEETTTSCTTS-----CEEEEECCEECC
T ss_pred EEEEEEEECCCCCCCcEEEEEEEEhhhhcCCC-----CccEEEECcCCC
Confidence 899999999998 8999999999999998653 367899999875
No 39
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=4.4e-17 Score=150.08 Aligned_cols=116 Identities=16% Similarity=0.140 Sum_probs=98.2
Q ss_pred ceeceEEEEEEEccCccccCCCcccCCCCCcchhhhccCCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEEC---C-
Q 004297 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYG---Q- 396 (763)
Q Consensus 321 ~~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~---~- 396 (763)
...|+|++.+.+. ...+.|.|+|++|++ + |..|.+||||++.+. +
T Consensus 10 ~~~G~l~~sl~y~-------------------------~~~~~L~V~v~~a~~---~---d~~g~sDPyv~v~l~~~~~~ 58 (138)
T 1wfm_A 10 NQAPKLHYCLDYD-------------------------CQKAELFVTRLEAVT---S---NHDGGCDCYVQGSVANRTGS 58 (138)
T ss_dssp SSCCEEEEEEEEE-------------------------TTTTEEEEEEEEEEC---C---CCSSCCCEEEEEEEEETTEE
T ss_pred CcceEEEEEEEEe-------------------------CCCCEEEEEEEEEEc---C---CCCCCcceEEEEEEEcCCCc
Confidence 3479999888763 233799999999994 3 667899999999883 2
Q ss_pred EEEeeeeecCCCCCccccEEEEEeeCC---CcEEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEee
Q 004297 397 KWVRTRTIIDSPTPKWNEQYTWEVFDP---CTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPL 473 (763)
Q Consensus 397 ~~~~T~~~~~t~~P~wne~~~~~v~~~---~~~l~i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L 473 (763)
..++|+++++++||+|||.|.|.+... ...|.|+|||+|.++ +|++||++.|+|.++..+.....||+|
T Consensus 59 ~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~~~--------~dd~lG~~~i~l~~l~~~~~~~~W~~L 130 (138)
T 1wfm_A 59 VEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFS--------RHSVAGELRLGLDGTSVPLGAAQWGEL 130 (138)
T ss_dssp EEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCSSC--------TTSCSEEEEEESSSSSSCTTCCEEEEC
T ss_pred ccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCCCC--------CCcEEEEEEEEcccccCcccccceeeC
Confidence 358999999999999999999998753 568999999999886 899999999999999866677899999
Q ss_pred ee
Q 004297 474 LV 475 (763)
Q Consensus 474 ~~ 475 (763)
..
T Consensus 131 ~~ 132 (138)
T 1wfm_A 131 KT 132 (138)
T ss_dssp CC
T ss_pred cC
Confidence 75
No 40
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.73 E-value=2.2e-17 Score=157.66 Aligned_cols=127 Identities=20% Similarity=0.192 Sum_probs=103.3
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeeCCCCCCeeccEEEEEecCCCCceEEEEEEeCCCC-CC
Q 004297 35 EQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDFV-KD 113 (763)
Q Consensus 35 ~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~~l~i~V~d~~~~-~d 113 (763)
...+.|.|+|++|++|+..+..+.+||||++++++++++|+++++|+||+|||+|.|.+.+ ...|.|+|||++.+ +|
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~~~d 110 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTLKSD 110 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSSSCC
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCCCCC
Confidence 3457899999999999944434559999999999999999999999999999999999864 78899999999998 89
Q ss_pred eeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCC-CccceEEEEEEEEcc
Q 004297 114 DFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKG-DKVRGELMLAVWMGT 163 (763)
Q Consensus 114 ~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~-~~~~G~i~l~~~~~~ 163 (763)
++||++.++|.++.............|++|....+ ....|+|.+.+.+.+
T Consensus 111 d~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~ 161 (173)
T 2nq3_A 111 VLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQ 161 (173)
T ss_dssp EEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEE
T ss_pred ceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeee
Confidence 99999999999987543211112357999998642 246799999987654
No 41
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.73 E-value=1.3e-17 Score=159.67 Aligned_cols=104 Identities=19% Similarity=0.290 Sum_probs=92.0
Q ss_pred ceEEEEEEEccCCCCCccCCC-CCCCCcEEEEEECC-----EEEeeeeecCCCCCccccEEEEEeeCCCcEEEEEEE-eC
Q 004297 362 GVLELGILNAQGLMPMKTKDG-RGTTDAYCVAKYGQ-----KWVRTRTIIDSPTPKWNEQYTWEVFDPCTVITIGVF-DN 434 (763)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~-~g~~Dpyv~v~~~~-----~~~~T~~~~~t~~P~wne~~~~~v~~~~~~l~i~V~-d~ 434 (763)
|.|.|+|++|+||+++ |. .|.+||||++.+++ ..++|+++++++||+|||.|.|.+......|.|+|| |+
T Consensus 30 ~~L~V~v~~a~~L~~~---d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQK---PGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDY 106 (171)
T ss_dssp TEEEEEEEEEESCCCC---C---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCC---CcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcC
Confidence 7999999999999987 43 58899999998843 378999999999999999999998766789999999 99
Q ss_pred CCCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEeeeee
Q 004297 435 CHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVL 476 (763)
Q Consensus 435 ~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~~~ 476 (763)
+.++ +|++||++.|+|.++..+....+||+|...
T Consensus 107 d~~~--------~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 107 GRMD--------HKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp STTC--------SSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCC--------CCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 9876 789999999999999888888999999764
No 42
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.73 E-value=2e-17 Score=152.30 Aligned_cols=103 Identities=25% Similarity=0.423 Sum_probs=91.5
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE-----CCEEEeeeeecCCCCCccccEEEEEeeCC--CcEEEEEEEeC
Q 004297 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY-----GQKWVRTRTIIDSPTPKWNEQYTWEVFDP--CTVITIGVFDN 434 (763)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~-----~~~~~~T~~~~~t~~P~wne~~~~~v~~~--~~~l~i~V~d~ 434 (763)
|.|.|.|++|+||+++ +..|.+||||++.+ +...++|+++++++||.|||.|.|.+... ...|.|+|||+
T Consensus 16 ~~L~v~v~~a~~L~~~---d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~ 92 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPM---DPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDW 92 (137)
T ss_dssp TEEEEEEEEEESCCCC---STTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCC---CCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEEC
Confidence 7999999999999987 55689999999998 56679999999999999999999998753 45899999999
Q ss_pred CCCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEeeeee
Q 004297 435 CHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVL 476 (763)
Q Consensus 435 ~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~~~ 476 (763)
+..+ +|++||.+.|+|.++..+. ..+||+|...
T Consensus 93 d~~~--------~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 93 DRTT--------RNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp CSSS--------CCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred CCCC--------CCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 9876 8999999999999997665 7899999753
No 43
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.73 E-value=2.1e-17 Score=151.30 Aligned_cols=103 Identities=14% Similarity=0.239 Sum_probs=91.4
Q ss_pred cceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE-----CCEEEeeeeecCCCCCccccEEEEE-eeC---CCcEEEEEE
Q 004297 361 IGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY-----GQKWVRTRTIIDSPTPKWNEQYTWE-VFD---PCTVITIGV 431 (763)
Q Consensus 361 ~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~-----~~~~~~T~~~~~t~~P~wne~~~~~-v~~---~~~~l~i~V 431 (763)
.+.|.|.|++|+||+. +..|.+||||++.+ +...+||+++++++||+|||.|.|. +.. ....|.|+|
T Consensus 19 ~~~L~V~V~~a~~L~~----~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V 94 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVT----EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSV 94 (134)
T ss_dssp TTEEEEEEEEEECCCC----TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEE
T ss_pred CCEEEEEEEEeeCCCC----CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEE
Confidence 3899999999999985 44688999999988 4467899999999999999999999 663 357999999
Q ss_pred EeCCCCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEeeee
Q 004297 432 FDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLV 475 (763)
Q Consensus 432 ~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~~ 475 (763)
||++.++ +|++||++.|+|.++..+.....||+|..
T Consensus 95 ~d~d~~~--------~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 95 LSAESLR--------ENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp EECCSSS--------CCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred EECCCCC--------CCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 9999876 78999999999999998888899999964
No 44
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=3.4e-17 Score=150.95 Aligned_cols=119 Identities=20% Similarity=0.253 Sum_probs=98.5
Q ss_pred ceeceEEEEEEEccCccccCCCcccCCCCCcchhhhccCCcceEEEEEEEccCCCCCccCCC-CCCCCcEEEEEEC---C
Q 004297 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDG-RGTTDAYCVAKYG---Q 396 (763)
Q Consensus 321 ~~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~-~g~~Dpyv~v~~~---~ 396 (763)
...|+|.+.+.+. +..+.|.|+|++|+||+++ +. .|.+||||++.+. .
T Consensus 6 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~---d~~~~~~dpyv~v~~~~~~~ 57 (138)
T 1ugk_A 6 SGLGTLFFSLEYN-------------------------FERKAFVVNIKEARGLPAM---DEQSMTSDPYIKMTILPEKK 57 (138)
T ss_dssp CCCCEEEEEEEEE-------------------------GGGTEEEEEEEEEESCCCC---BTTTTBCEEEEEEEEETTTC
T ss_pred CccEEEEEEEEEE-------------------------CCCCEEEEEEEEeeCCCCC---CCCCCCCCCEEEEEEecCCC
Confidence 4479999888763 2348999999999999987 55 3789999999985 3
Q ss_pred EEEeeeeecCCCCCccccEEEEE-eeC---CCcEEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecccccCCC-eEeeeE
Q 004297 397 KWVRTRTIIDSPTPKWNEQYTWE-VFD---PCTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDR-VYTHSY 471 (763)
Q Consensus 397 ~~~~T~~~~~t~~P~wne~~~~~-v~~---~~~~l~i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~-~~~~~~ 471 (763)
..++|+++++++||+|||.|.|. +.. ....|.|+|||++.++ +|++||++.|+|.++..+. ....|+
T Consensus 58 ~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~~~--------~~~~lG~~~i~l~~l~~~~~~~~~~~ 129 (138)
T 1ugk_A 58 HKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFS--------RDDIIGEVLIPLSGIELSEGKMLMNR 129 (138)
T ss_dssp SEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECSSC--------CCCCCEEEEEECTTCCCTTCCEEEEE
T ss_pred ceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCCCC--------CCcEEEEEEEehhHccCCCCcchhhh
Confidence 68999999999999999999996 553 2468999999999876 8899999999999997654 345678
Q ss_pred eeee
Q 004297 472 PLLV 475 (763)
Q Consensus 472 ~L~~ 475 (763)
+|..
T Consensus 130 ~l~~ 133 (138)
T 1ugk_A 130 EIIS 133 (138)
T ss_dssp ECBS
T ss_pred hhhc
Confidence 8864
No 45
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=1.2e-17 Score=154.63 Aligned_cols=118 Identities=28% Similarity=0.553 Sum_probs=98.5
Q ss_pred eeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeeeCCCCCCeeccEEEEEe-c--CCC
Q 004297 26 KLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKM-----GNYKGTTRHFEKKTNPEWNQVFAFSK-D--RIQ 97 (763)
Q Consensus 26 ~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~-----~~~~~kT~~~~~t~nP~Wne~f~f~v-~--~~~ 97 (763)
++.+...+....+.|.|+|++|++|+..+..+.+||||++++ +.++++|++++++.||+|||+|.|.+ . ++.
T Consensus 9 ~i~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~ 88 (141)
T 1v27_A 9 QLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFR 88 (141)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGG
T ss_pred EEEEEEEEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhc
Confidence 344444444566899999999999999998999999999999 34688999999999999999999995 2 334
Q ss_pred CceEEEEEEeCCCC-C--CeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCCC
Q 004297 98 SSVLEVTVKDKDFV-K--DDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGD 149 (763)
Q Consensus 98 ~~~l~i~V~d~~~~-~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~ 149 (763)
...|.|+|||++.. + +++||++.++|.++.... ..+||+|.+....
T Consensus 89 ~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~------~~~W~~L~~~~~g 137 (141)
T 1v27_A 89 ERMLEITLWDQARVREEESEFLGEILIELETALLDD------EPHWYKLQTHDSG 137 (141)
T ss_dssp TCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS------EEEEEECBCCSSC
T ss_pred CCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC------CCceEECcccccC
Confidence 57899999999998 5 899999999999987542 6799999987643
No 46
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.72 E-value=2e-17 Score=153.59 Aligned_cols=115 Identities=30% Similarity=0.444 Sum_probs=98.5
Q ss_pred eeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeeeeeeeeCCCCCCeeccEEEEEec--CCCCce
Q 004297 26 KLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMG---NYKGTTRHFEKKTNPEWNQVFAFSKD--RIQSSV 100 (763)
Q Consensus 26 ~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~---~~~~kT~~~~~t~nP~Wne~f~f~v~--~~~~~~ 100 (763)
++.+...+....+.|.|+|++|++|+..+..+.+||||++++. .++++|++++++.||+|||+|.|.+. ++....
T Consensus 22 ~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 101 (143)
T 3f04_A 22 KLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKT 101 (143)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCE
T ss_pred EEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCE
Confidence 4555555556778999999999999999888999999999994 46889999999999999999999985 334578
Q ss_pred EEEEEEeCCCC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeec
Q 004297 101 LEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLED 145 (763)
Q Consensus 101 l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~ 145 (763)
|.|+|||++.. ++++||++.++|.++..+. ...+|++|++
T Consensus 102 L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~ 142 (143)
T 3f04_A 102 LVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQS 142 (143)
T ss_dssp EEEEEEECCSSSCCEEEEEEEEEGGGCCTTS-----CEEEEEECBC
T ss_pred EEEEEEeCCCCCCCceEEEEEEEHHHccCCC-----CcceEEECcC
Confidence 99999999998 8999999999999997653 3578999975
No 47
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.72 E-value=5.5e-17 Score=153.43 Aligned_cols=119 Identities=24% Similarity=0.298 Sum_probs=100.1
Q ss_pred ceeceEEEEEEEccCccccCCCcccCCCCCcchhhhccCCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC----
Q 004297 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ---- 396 (763)
Q Consensus 321 ~~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~---- 396 (763)
...|+|.+.+.+. +..|.|.|+|++|+||+++ +..|.+||||++.+++
T Consensus 9 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~l~~~~~~ 60 (159)
T 1tjx_A 9 EKLGDICFSLRYV-------------------------PTAGKLTVVILEAKNLKKM---DVGGLSDPYVKIHLMQNGKR 60 (159)
T ss_dssp GCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCC---STTSCCCEEEEEEEEETTEE
T ss_pred CcCCeEEEEEEEc-------------------------CCCCEEEEEEEEeeCCCCc---cCCCCCCeEEEEEEEeCCce
Confidence 4579999988763 3348999999999999987 5568999999998842
Q ss_pred -EEEeeeeecCCCCCccccEEEEEeeCC---CcEEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecccc-----------
Q 004297 397 -KWVRTRTIIDSPTPKWNEQYTWEVFDP---CTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTL----------- 461 (763)
Q Consensus 397 -~~~~T~~~~~t~~P~wne~~~~~v~~~---~~~l~i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l----------- 461 (763)
..++|+++++++||+|||.|.|.+... ...|.|+|||++.++ +|++||.+.|++..+
T Consensus 61 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~--------~~~~iG~~~i~l~~~~~~~~~w~~l~ 132 (159)
T 1tjx_A 61 LKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIG--------KNDAIGKVFVGYNSTGAELRHWSDML 132 (159)
T ss_dssp EEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSS--------CCEEEEEEEEETTCCHHHHHHHHHHH
T ss_pred eceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCCCC--------CCceEEEEEECCCCCCcHHHHHHHHH
Confidence 468999999999999999999998753 468999999999876 899999999999964
Q ss_pred -cCCCeEeeeEeeee
Q 004297 462 -ETDRVYTHSYPLLV 475 (763)
Q Consensus 462 -~~~~~~~~~~~L~~ 475 (763)
..++...+||+|..
T Consensus 133 ~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 133 ANPRRPIAQWHTLQV 147 (159)
T ss_dssp HSTTCCEEEEEECBC
T ss_pred HCCCCeeeeEEECcC
Confidence 24567789999965
No 48
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.72 E-value=4.9e-17 Score=148.63 Aligned_cols=119 Identities=22% Similarity=0.342 Sum_probs=99.6
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC--eeeeeeeeCCCCCCeeccEEEEEecCCCCceEEEEEEeCCCC-C-
Q 004297 37 MQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN--YKGTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDFV-K- 112 (763)
Q Consensus 37 ~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~--~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~~l~i~V~d~~~~-~- 112 (763)
...|.|+|++|++|+..|..|.+||||++++++ ++++|+++++|+||+|||+|.|.+... ..|.|+|||++.. +
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIHKK 81 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTTSS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCCCC
Confidence 458999999999999999999999999999975 789999999999999999999999764 3599999999987 4
Q ss_pred --CeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCC---CccceEEEEEEEE
Q 004297 113 --DDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKG---DKVRGELMLAVWM 161 (763)
Q Consensus 113 --d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~---~~~~G~i~l~~~~ 161 (763)
|++||++.+++.++..... ...+|++|....+ ....|+|.+++..
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~~----~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLKD----TGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHTT----SCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCceEEEEEeHHHhhcccc----cCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 8999999999998843211 1358999987642 2357999998754
No 49
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.71 E-value=7e-18 Score=156.44 Aligned_cols=116 Identities=24% Similarity=0.381 Sum_probs=100.0
Q ss_pred eeceEEEEEEEccCccccCCCcccCCCCCcchhhhccCCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCE----
Q 004297 322 FASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQK---- 397 (763)
Q Consensus 322 ~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~~---- 397 (763)
..|+|++++.+. .|.|.|+|++|+||+++ |..|.+||||++.+++.
T Consensus 5 ~~G~i~~~l~y~---------------------------~~~L~V~v~~a~~L~~~---d~~g~~Dpyv~v~~~~~~~~~ 54 (142)
T 1rh8_A 5 ITGEIQLQINYD---------------------------LGNLIIHILQARNLVPR---DNNGYSDPFVKVYLLPGRGQV 54 (142)
T ss_dssp CCCEEEEEEEEE---------------------------TTEEEEEEEEEESCCCC---SSSSCSCCEEEEEETTSSCCC
T ss_pred cceEEEEEEEEc---------------------------CCEEEEEEEEecCCCCC---CCCCCCCceEEEEEecCCCcc
Confidence 479999888762 27999999999999987 55689999999999763
Q ss_pred ----------EEeeeeecCCCCCccccEEEEE-eeC---CCcEEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecccccC
Q 004297 398 ----------WVRTRTIIDSPTPKWNEQYTWE-VFD---PCTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLET 463 (763)
Q Consensus 398 ----------~~~T~~~~~t~~P~wne~~~~~-v~~---~~~~l~i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~ 463 (763)
.++|+++++++||+|||.|.|. +.. ....|.|+|||++.++ +|++||++.|+|.++..
T Consensus 55 ~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~~~--------~~~~lG~~~i~l~~l~~ 126 (142)
T 1rh8_A 55 MVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFS--------SNDFLGEVLIDLSSTSH 126 (142)
T ss_dssp EECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECSSS--------CEEEEEEEEEETTSCGG
T ss_pred cccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECCCCC--------CCceEEEEEEecccccc
Confidence 4799999999999999999997 542 3679999999999876 78999999999999987
Q ss_pred CCeEeeeEeeee
Q 004297 464 DRVYTHSYPLLV 475 (763)
Q Consensus 464 ~~~~~~~~~L~~ 475 (763)
+.....||+|..
T Consensus 127 ~~~~~~W~~L~~ 138 (142)
T 1rh8_A 127 LDNTPRWYPLKE 138 (142)
T ss_dssp GTTCCEEEECBC
T ss_pred CCCCCeEEECCc
Confidence 777789999965
No 50
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.71 E-value=3.6e-17 Score=152.88 Aligned_cols=102 Identities=25% Similarity=0.409 Sum_probs=90.8
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEEC-----CEEEeeeeecCCCCCccccEEEEEeeCC--CcEEEEEEEeC
Q 004297 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYG-----QKWVRTRTIIDSPTPKWNEQYTWEVFDP--CTVITIGVFDN 434 (763)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~-----~~~~~T~~~~~t~~P~wne~~~~~v~~~--~~~l~i~V~d~ 434 (763)
+.|.|+|++|+||+++ +..|.+||||++.++ ...++|+++++++||+|||.|.|.+... ...|.|+|||+
T Consensus 31 ~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~ 107 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPM---DPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDW 107 (149)
T ss_dssp SEEEEEEEEEESCCCC---STTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCC---CCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEEC
Confidence 6899999999999987 556899999999986 3579999999999999999999999763 46899999999
Q ss_pred CCCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEeeee
Q 004297 435 CHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLV 475 (763)
Q Consensus 435 ~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~~ 475 (763)
+.++ +|++||++.|+|.++..+ ...+||+|..
T Consensus 108 d~~~--------~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 108 DLTS--------RNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp CSSS--------CCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred CCCC--------CCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 9876 899999999999999876 4789999965
No 51
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.71 E-value=6.2e-17 Score=149.23 Aligned_cols=92 Identities=27% Similarity=0.346 Sum_probs=80.9
Q ss_pred CcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC-----EEEeeeeecCCCCCccccEEEEEeeCCC---cEEEEEE
Q 004297 360 SIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ-----KWVRTRTIIDSPTPKWNEQYTWEVFDPC---TVITIGV 431 (763)
Q Consensus 360 ~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~-----~~~~T~~~~~t~~P~wne~~~~~v~~~~---~~l~i~V 431 (763)
..|.|.|.|++|+||+++ +..|.+||||++.+++ ..++|+++++++||+|||.|.|.+.... ..|.|+|
T Consensus 14 ~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V 90 (138)
T 3n5a_A 14 SANSIIVNIIKARNLKAM---DIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITV 90 (138)
T ss_dssp TTTEEEEEEEEEESCCCC---BTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEE
T ss_pred CCCeEEEEEEEeeCCCCc---CCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEE
Confidence 348999999999999987 5568999999998853 4689999999999999999999987543 6899999
Q ss_pred EeCCCCCCCCCCCCCCCCccEEEEEeccccc
Q 004297 432 FDNCHLHGGDKAGGARDSRIGKVRIRLSTLE 462 (763)
Q Consensus 432 ~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~ 462 (763)
||++.++ +|++||++.|+|.++.
T Consensus 91 ~d~~~~~--------~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 91 MDKDKLS--------RNDVIGKIYLSWKSGP 113 (138)
T ss_dssp EECCSSS--------CCEEEEEEEESSSSCH
T ss_pred EECCCCC--------CCcEEEEEEEccccCC
Confidence 9999876 8999999999999864
No 52
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.71 E-value=1.4e-17 Score=154.48 Aligned_cols=114 Identities=35% Similarity=0.627 Sum_probs=97.3
Q ss_pred ceeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe--------------eeeeeeeCCCCCCeeccEEE
Q 004297 25 DKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNY--------------KGTTRHFEKKTNPEWNQVFA 90 (763)
Q Consensus 25 ~~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~~--------------~~kT~~~~~t~nP~Wne~f~ 90 (763)
..+++.|+ .+.|.|+|++|++|+..+..|.+||||++++++. +++|+++++|.||+|||+|.
T Consensus 9 i~~~l~y~----~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~ 84 (142)
T 1rh8_A 9 IQLQINYD----LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVI 84 (142)
T ss_dssp EEEEEEEE----TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEE
T ss_pred EEEEEEEc----CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEE
Confidence 45666666 5799999999999999998999999999999873 47899999999999999999
Q ss_pred EE-ec--CCCCceEEEEEEeCCCC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCC
Q 004297 91 FS-KD--RIQSSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (763)
Q Consensus 91 f~-v~--~~~~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (763)
|. +. ++....|.|+|||++.. ++++||++.++|.++.... ...+||+|.+..
T Consensus 85 f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 140 (142)
T 1rh8_A 85 YKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLD-----NTPRWYPLKEQT 140 (142)
T ss_dssp ECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGT-----TCCEEEECBCCC
T ss_pred ECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCC-----CCCeEEECCccC
Confidence 97 43 33467899999999998 8999999999999987542 257999999864
No 53
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.71 E-value=3.9e-17 Score=151.36 Aligned_cols=118 Identities=23% Similarity=0.398 Sum_probs=100.3
Q ss_pred ceeceEEEEEEEccCccccCCCcccCCCCCcchhhhccCCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC----
Q 004297 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ---- 396 (763)
Q Consensus 321 ~~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~---- 396 (763)
...|+|.+.+.+. +..+.|.|+|++|+||+++ +..|.+||||++.+++
T Consensus 13 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~ 64 (142)
T 2chd_A 13 TTLGALEFSLLYD-------------------------QDNSNLQCTIIRAKGLKPM---DSNGLADPYVKLHLLPGASK 64 (142)
T ss_dssp -CCCEEEEEEEEE-------------------------GGGTEEEEEEEEEESCCCC---CTTSCCCEEEEEEEESCCSG
T ss_pred CccceEEEEEEEe-------------------------CCCCEEEEEEEEecCCCCC---CCCCCCCCEEEEEEEcCCCC
Confidence 4578998888763 2338999999999999987 5568999999999865
Q ss_pred -EEEeeeeecCCCCCccccEEEEE-eeCC---CcEEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeE
Q 004297 397 -KWVRTRTIIDSPTPKWNEQYTWE-VFDP---CTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSY 471 (763)
Q Consensus 397 -~~~~T~~~~~t~~P~wne~~~~~-v~~~---~~~l~i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~ 471 (763)
..++|+++++++||+|||.|.|. +... ...|.|+|||++.++ +|++||++.|+|.++..+.....|+
T Consensus 65 ~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~--------~d~~iG~~~i~l~~l~~~~~~~~~~ 136 (142)
T 2chd_A 65 SNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDKFG--------HNEFIGETRFSLKKLKANQRKNFNI 136 (142)
T ss_dssp GGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECTTS--------CEEEEEEEEEEGGGCCTTCCEEEEE
T ss_pred cceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCCCC--------CCcEEEEEEEEHHHcCCCCccEEEE
Confidence 67999999999999999999998 5432 368999999999876 7899999999999999888778888
Q ss_pred eee
Q 004297 472 PLL 474 (763)
Q Consensus 472 ~L~ 474 (763)
+|.
T Consensus 137 ~L~ 139 (142)
T 2chd_A 137 CLE 139 (142)
T ss_dssp ECB
T ss_pred ecc
Confidence 874
No 54
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=4.1e-17 Score=152.16 Aligned_cols=123 Identities=17% Similarity=0.187 Sum_probs=101.2
Q ss_pred CceeceEEEEEEEccCccccCCCcccCCCCCcchhhhccCCcceEEEEEEEccCCCCC-ccC---CCCCCCCcEEEEEEC
Q 004297 320 TKFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPM-KTK---DGRGTTDAYCVAKYG 395 (763)
Q Consensus 320 ~~~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~-~~~---~~~g~~Dpyv~v~~~ 395 (763)
....|+|.+.+.+. +..+.|.|+|++|+||++. +.. +..|.+||||++.+.
T Consensus 9 ~~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~ 63 (147)
T 2enp_A 9 KYQLGMLHFSTQYD-------------------------LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLL 63 (147)
T ss_dssp CCCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEE
T ss_pred CCcceEEEEEEEEc-------------------------CCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEE
Confidence 34579999988863 3348999999999999973 321 124689999999985
Q ss_pred ---CEEEeeeeecCCCCCccccEEEEEeeCC---CcEEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecccccCCCeEee
Q 004297 396 ---QKWVRTRTIIDSPTPKWNEQYTWEVFDP---CTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTH 469 (763)
Q Consensus 396 ---~~~~~T~~~~~t~~P~wne~~~~~v~~~---~~~l~i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~ 469 (763)
...++|+++++++||+|||.|.|.+... ...|.|+|||++.++ +|++||++.|+|.++..+.....
T Consensus 64 ~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~--------~~~~iG~~~i~l~~l~~~~~~~~ 135 (147)
T 2enp_A 64 PDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFS--------RHCVIGKVSVPLCEVDLVKGGHW 135 (147)
T ss_dssp TCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCSTTC--------CSCCCEEEEEETTTSCTTTCCCE
T ss_pred eCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCCCc--------CCcEEEEEEEechhcCCCCCccE
Confidence 3578999999999999999999998742 458999999999876 78999999999999987766678
Q ss_pred eEeeee
Q 004297 470 SYPLLV 475 (763)
Q Consensus 470 ~~~L~~ 475 (763)
|++|..
T Consensus 136 w~~L~~ 141 (147)
T 2enp_A 136 WKALIP 141 (147)
T ss_dssp EECCBC
T ss_pred EEEeec
Confidence 999965
No 55
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.70 E-value=1.9e-16 Score=145.80 Aligned_cols=115 Identities=21% Similarity=0.341 Sum_probs=94.1
Q ss_pred eeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC----eeeeeeeeCCCCCCeeccEEEEEecC--CCCc
Q 004297 26 KLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN----YKGTTRHFEKKTNPEWNQVFAFSKDR--IQSS 99 (763)
Q Consensus 26 ~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~----~~~kT~~~~~t~nP~Wne~f~f~v~~--~~~~ 99 (763)
++.+...+....+.|.|+|++|++ .+..|.+||||++++.+ .+++|+++++|+||+|||+|.|.+.. +...
T Consensus 14 ~l~~sl~y~~~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~ 90 (138)
T 1wfm_A 14 KLHYCLDYDCQKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTA 90 (138)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTC
T ss_pred EEEEEEEEeCCCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCC
Confidence 344444444566899999999993 67788999999999942 36799999999999999999999853 3457
Q ss_pred eEEEEEEeCCCC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCC
Q 004297 100 VLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKG 148 (763)
Q Consensus 100 ~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 148 (763)
.|.|+|||++.+ ++++||++.++|.++.... ...+|++|.+...
T Consensus 91 ~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~-----~~~~W~~L~~~~~ 135 (138)
T 1wfm_A 91 TLTLTLRTCDRFSRHSVAGELRLGLDGTSVPL-----GAAQWGELKTSGP 135 (138)
T ss_dssp EEEEEEEECCSSCTTSCSEEEEEESSSSSSCT-----TCCEEEECCCCSC
T ss_pred EEEEEEEECCCCCCCcEEEEEEEEcccccCcc-----cccceeeCcCCCc
Confidence 899999999998 8999999999999996432 3679999998643
No 56
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.70 E-value=1.2e-16 Score=152.29 Aligned_cols=106 Identities=19% Similarity=0.296 Sum_probs=91.7
Q ss_pred ceeceEEEEEEEccCccccCCCcccCCCCCcchhhhccCCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC----
Q 004297 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ---- 396 (763)
Q Consensus 321 ~~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~---- 396 (763)
...|+|.+.+.+. +..+.|.|.|++|+||+++ +..|.+||||++.+++
T Consensus 21 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~---d~~g~~DPyv~v~l~~~~~~ 72 (166)
T 2cm5_A 21 EERGKILVSLMYS-------------------------TQQGGLIVGIIRCVHLAAM---DANGYSDPFVKLWLKPDMGK 72 (166)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCC---STTSCCCEEEEEEEETC---
T ss_pred CccceEEEEEEEE-------------------------CCCCEEEEEEEEeECCCCc---cCCCCCCcEEEEEEECCCCc
Confidence 4579999888763 2348999999999999987 5568999999999865
Q ss_pred -EEEeeeeecCCCCCccccEEEEEeeCC---CcEEEEEEEeCCCCCCCCCCCCCCCCccEEEEEeccccc
Q 004297 397 -KWVRTRTIIDSPTPKWNEQYTWEVFDP---CTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLE 462 (763)
Q Consensus 397 -~~~~T~~~~~t~~P~wne~~~~~v~~~---~~~l~i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~ 462 (763)
..++|+++++++||+|||.|.|.+... ...|.|+|||++.++ +|++||++.|+|.++.
T Consensus 73 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~--------~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 73 KAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGK--------SNDYIGGCQLGISAKG 134 (166)
T ss_dssp CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSS--------CCEEEEEEEEETTCCH
T ss_pred cceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCCCC--------CCcEEEeEEEecccCC
Confidence 579999999999999999999998752 569999999999876 8899999999999863
No 57
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.70 E-value=2.4e-17 Score=153.98 Aligned_cols=118 Identities=16% Similarity=0.235 Sum_probs=97.7
Q ss_pred eeeeeecccCceeEEEEEEEEeecCCCCC-CCCCCCcEEEEEECC-----eeeeeeeeCCCCCCeeccEEEEEecCC--C
Q 004297 26 KLTSTYDLVEQMQYLYVRVVKAKDLPPKD-VTGSCDPYVEVKMGN-----YKGTTRHFEKKTNPEWNQVFAFSKDRI--Q 97 (763)
Q Consensus 26 ~~~~~~~~~~~~~~L~v~v~~a~~L~~~~-~~~~~dPyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~v~~~--~ 97 (763)
++.+...+....+.|.|+|++|++|+..+ ..+.+||||++++.+ .+++|++++++.||+|||+|.|.+... .
T Consensus 11 ~l~~sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~ 90 (148)
T 3fdw_A 11 RIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLA 90 (148)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGG
T ss_pred EEEEEEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhC
Confidence 34444444566789999999999999888 578999999999974 478999999999999999999998542 3
Q ss_pred CceEEEEEEeCCCC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCC
Q 004297 98 SSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKG 148 (763)
Q Consensus 98 ~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 148 (763)
...|.|+|||++.. ++++||++.++|.++..+. ...+||+|.++.+
T Consensus 91 ~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~~ 137 (148)
T 3fdw_A 91 QRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDK-----KLDHCLPLHGKIS 137 (148)
T ss_dssp GCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHC-----CSEEEEECBCC--
T ss_pred ceEEEEEEEECCCCcCCcEEEEEEEEcccccccC-----CccceEECcCccc
Confidence 56799999999998 8999999999999997653 2569999998763
No 58
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.69 E-value=1.2e-16 Score=150.03 Aligned_cols=115 Identities=23% Similarity=0.417 Sum_probs=95.8
Q ss_pred ceeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeeeCCCCCCeeccEEEEEe--cCCC
Q 004297 25 DKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN-----YKGTTRHFEKKTNPEWNQVFAFSK--DRIQ 97 (763)
Q Consensus 25 ~~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~v--~~~~ 97 (763)
..+++.|+ ...+.|.|+|++|++|+..+ .+.+||||++++.+ .+++|+++++|.||+|||+|.|.+ .+..
T Consensus 16 ~~lsL~y~--~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~ 92 (153)
T 3fbk_A 16 GQLRLSID--AQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQ 92 (153)
T ss_dssp CEEEEEEE--ESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTT
T ss_pred EEEEEEEE--CCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhC
Confidence 35555555 56679999999999999998 68999999999943 568999999999999999999998 4443
Q ss_pred CceEEEEEEeCCCC-C-CeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCC
Q 004297 98 SSVLEVTVKDKDFV-K-DDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (763)
Q Consensus 98 ~~~l~i~V~d~~~~-~-d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (763)
..|.|+|||.+.. + |++||++.++|.++.... ....+||+|.+..
T Consensus 93 -~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~----~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 93 -KRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPD----KEISGWYYLLGEH 139 (153)
T ss_dssp -SEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC------CCEEEEEECBCTT
T ss_pred -CEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCC----CccccEEECCChh
Confidence 4599999999997 5 999999999999997521 2367899999865
No 59
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.69 E-value=1.1e-16 Score=147.38 Aligned_cols=113 Identities=34% Similarity=0.559 Sum_probs=96.4
Q ss_pred ceeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeeeCCCCCCeeccEEEEEecCC-CC
Q 004297 25 DKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKM-----GNYKGTTRHFEKKTNPEWNQVFAFSKDRI-QS 98 (763)
Q Consensus 25 ~~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~-----~~~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~ 98 (763)
..++..| ..+.|.|+|++|++|+..+..+.+||||++++ +..+++|++++++.||.|||+|.|.+... ..
T Consensus 7 l~~~l~~----~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~ 82 (137)
T 3rdl_A 7 IYLKAEV----TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKD 82 (137)
T ss_dssp EEEEEEE----ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGG
T ss_pred EEEEEEE----cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcC
Confidence 3455555 34899999999999999998999999999999 44688999999999999999999998542 24
Q ss_pred ceEEEEEEeCCCC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCC
Q 004297 99 SVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (763)
Q Consensus 99 ~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (763)
..|.|+|||++.. ++++||++.++|.++.... ..+||+|.+..
T Consensus 83 ~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~------~~~W~~L~~~~ 126 (137)
T 3rdl_A 83 RRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP------ASGWYKLLNQE 126 (137)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC------EEEEEECBCHH
T ss_pred CEEEEEEEECCCCCCCceEEEEEEeHHHhccCc------cCceEECcCcc
Confidence 5899999999988 8999999999999997542 67999998764
No 60
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.68 E-value=1.7e-16 Score=146.22 Aligned_cols=118 Identities=24% Similarity=0.316 Sum_probs=97.1
Q ss_pred eeeeeecccCceeEEEEEEEEeecCCCCCCC-CCCCcEEEEEECC---eeeeeeeeCCCCCCeeccEEEEE-ec--CCCC
Q 004297 26 KLTSTYDLVEQMQYLYVRVVKAKDLPPKDVT-GSCDPYVEVKMGN---YKGTTRHFEKKTNPEWNQVFAFS-KD--RIQS 98 (763)
Q Consensus 26 ~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~-~~~dPyv~v~~~~---~~~kT~~~~~t~nP~Wne~f~f~-v~--~~~~ 98 (763)
++.+...+....+.|.|+|++|++|+..+.. +.+||||++++.+ ++++|++++++.||+|||+|.|. +. ++..
T Consensus 10 ~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~ 89 (138)
T 1ugk_A 10 TLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQE 89 (138)
T ss_dssp EEEEEEEEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGG
T ss_pred EEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhcc
Confidence 4454555556778999999999999999885 8999999999964 68899999999999999999995 53 2245
Q ss_pred ceEEEEEEeCCCC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCC
Q 004297 99 SVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (763)
Q Consensus 99 ~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (763)
..|.|+|||++.. ++++||++.++|.++..... ....|++|....
T Consensus 90 ~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~----~~~~~~~l~~~~ 135 (138)
T 1ugk_A 90 LALHFTILSFDRFSRDDIIGEVLIPLSGIELSEG----KMLMNREIISGP 135 (138)
T ss_dssp CEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTC----CEEEEEECBSSS
T ss_pred CEEEEEEEECCCCCCCcEEEEEEEehhHccCCCC----cchhhhhhhcCC
Confidence 7899999999988 89999999999999986532 234578888654
No 61
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.68 E-value=8.5e-17 Score=149.07 Aligned_cols=117 Identities=28% Similarity=0.380 Sum_probs=96.4
Q ss_pred eeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeeeCCCCCCeeccEEEEEecC--CCC
Q 004297 26 KLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN-----YKGTTRHFEKKTNPEWNQVFAFSKDR--IQS 98 (763)
Q Consensus 26 ~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~v~~--~~~ 98 (763)
++.+...+....+.|.|+|++|++|+..+..+ +||||++++.+ .+++|+++++|.||+|||+|.|.+.. +..
T Consensus 12 ~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~ 90 (142)
T 2dmg_A 12 QIQLTIRHSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQR 90 (142)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHH
T ss_pred eEEEEEEEeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCc
Confidence 34444444566789999999999999999888 99999999953 57899999999999999999999842 234
Q ss_pred ceEEEEEEeCCCC-C--CeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCC
Q 004297 99 SVLEVTVKDKDFV-K--DDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKG 148 (763)
Q Consensus 99 ~~l~i~V~d~~~~-~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 148 (763)
..|.|+|||++.. + +++||++.++|.++.... ...+||+|.+..+
T Consensus 91 ~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~-----~~~~W~~L~~~~~ 138 (142)
T 2dmg_A 91 RTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAK-----GWTQWYDLTEDSG 138 (142)
T ss_dssp CEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTT-----CBCCBCCCBCSCS
T ss_pred CEEEEEEEECCCccccCCcEEEEEEEecccccccc-----cccceeeccCCCC
Confidence 5899999999986 3 479999999999987653 3678999998653
No 62
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.68 E-value=1.2e-16 Score=152.88 Aligned_cols=113 Identities=27% Similarity=0.352 Sum_probs=95.6
Q ss_pred ceeeeeecccCceeEEEEEEEEeecCCCCCC-CCCCCcEEEEEECC-----eeeeeeeeCCCCCCeeccEEEEEecCCCC
Q 004297 25 DKLTSTYDLVEQMQYLYVRVVKAKDLPPKDV-TGSCDPYVEVKMGN-----YKGTTRHFEKKTNPEWNQVFAFSKDRIQS 98 (763)
Q Consensus 25 ~~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~-~~~~dPyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~v~~~~~ 98 (763)
..++..| ..+.|.|+|++|++|+..|. .+.+||||++++.+ .+++|+++++|.||+|||+|.|.+.. ..
T Consensus 21 l~~~l~y----~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~ 95 (171)
T 2q3x_A 21 IQIGMED----KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QG 95 (171)
T ss_dssp EEEEEEE----ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TT
T ss_pred EEEEEEE----CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CC
Confidence 3455555 46799999999999999985 68999999999965 37899999999999999999999864 46
Q ss_pred ceEEEEEE-eCCCC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCC
Q 004297 99 SVLEVTVK-DKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (763)
Q Consensus 99 ~~l~i~V~-d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (763)
..|.|+|| |++.. ++++||++.++|.++..+. ...+||+|....
T Consensus 96 ~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 141 (171)
T 2q3x_A 96 KVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSS-----MVIGWYKLFPPS 141 (171)
T ss_dssp EEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTS-----CEEEEEECBCGG
T ss_pred CEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCC-----CcceeEECCCcc
Confidence 88999999 99988 8999999999999998553 367999999764
No 63
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.68 E-value=3.5e-16 Score=146.87 Aligned_cols=117 Identities=18% Similarity=0.228 Sum_probs=90.5
Q ss_pred ceeceEEEEEEEccCccccCCCcccCCCCCcchhhhccCCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE--CCE-
Q 004297 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY--GQK- 397 (763)
Q Consensus 321 ~~~G~l~l~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~--~~~- 397 (763)
...|+|.+.+.+. +..+.|.|.|++|+||+++ +..|++||||++.+ ++.
T Consensus 14 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~ 65 (153)
T 1w15_A 14 SGRGELLVSLCYQ-------------------------STTNTLTVVVLKARHLPKS---DVSGLSDPYVKVNLYHAKKR 65 (153)
T ss_dssp --CCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCC---------CCCEEEEEEEEETTEE
T ss_pred ccccEEEEEEEEc-------------------------CCCCEEEEEEEEeECCCCc---CCCCCCCeEEEEEEEeCCeE
Confidence 4578998888763 3348999999999999987 55688999999988 443
Q ss_pred --EEeeeeecCCCCCccccEEEEEeeCC---CcEEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEe
Q 004297 398 --WVRTRTIIDSPTPKWNEQYTWEVFDP---CTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYP 472 (763)
Q Consensus 398 --~~~T~~~~~t~~P~wne~~~~~v~~~---~~~l~i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~ 472 (763)
.++|+++++++||+|||.|.|.+... ...|.|+|||++.++ +|++||++.|+|.+. +....+||+
T Consensus 66 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~~~--------~~~~lG~~~i~l~~~--~~~~~~W~~ 135 (153)
T 1w15_A 66 ISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSERGS--------RNEVIGRLVLGATAE--GSGGGHWKE 135 (153)
T ss_dssp EEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCTTS--------CCEEEEEEEESTTCC--SHHHHHHHH
T ss_pred eceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCCCC--------CCcEEEEEEECCCCC--chHHHHHHH
Confidence 57999999999999999999998764 368999999999876 889999999999983 233455666
Q ss_pred eee
Q 004297 473 LLV 475 (763)
Q Consensus 473 L~~ 475 (763)
|..
T Consensus 136 l~~ 138 (153)
T 1w15_A 136 ICD 138 (153)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
No 64
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.68 E-value=1.3e-16 Score=147.78 Aligned_cols=115 Identities=26% Similarity=0.457 Sum_probs=96.0
Q ss_pred ceeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeeeCCCCCCeeccEEEEE-ecC--C
Q 004297 25 DKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN-----YKGTTRHFEKKTNPEWNQVFAFS-KDR--I 96 (763)
Q Consensus 25 ~~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~-v~~--~ 96 (763)
..+++.|+ ...+.|.|+|++|++|+..+..|.+||||++++.+ .+++|++++++.||+|||+|.|. +.. +
T Consensus 18 l~~~l~y~--~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~ 95 (142)
T 2chd_A 18 LEFSLLYD--QDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDM 95 (142)
T ss_dssp EEEEEEEE--GGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHH
T ss_pred EEEEEEEe--CCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHc
Confidence 34555554 67789999999999999999889999999999976 68899999999999999999998 532 2
Q ss_pred CCceEEEEEEeCCCC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecC
Q 004297 97 QSSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDR 146 (763)
Q Consensus 97 ~~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 146 (763)
....|.|+|||++.. ++++||++.++|.++..+. ....|++|+.+
T Consensus 96 ~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~-----~~~~~~~L~~p 141 (142)
T 2chd_A 96 QRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQ-----RKNFNICLERV 141 (142)
T ss_dssp HHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTC-----CEEEEEECBCC
T ss_pred cCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCC-----ccEEEEecccC
Confidence 246899999999998 8899999999999998653 24567777653
No 65
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.68 E-value=2.3e-16 Score=147.35 Aligned_cols=104 Identities=35% Similarity=0.601 Sum_probs=92.1
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeeeCCCCCCeeccEEEEEecCC-CCceEEEEEEeCCC
Q 004297 37 MQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN-----YKGTTRHFEKKTNPEWNQVFAFSKDRI-QSSVLEVTVKDKDF 110 (763)
Q Consensus 37 ~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~~~l~i~V~d~~~ 110 (763)
.+.|.|+|++|++|+..+..+.+||||++++.+ .+++|++++++.||+|||+|.|.+... ....|.|+|||++.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 468999999999999999889999999999974 578999999999999999999998643 24689999999999
Q ss_pred C-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecC
Q 004297 111 V-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDR 146 (763)
Q Consensus 111 ~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 146 (763)
. ++++||++.++|.++.... ..+||+|.+.
T Consensus 110 ~~~~~~iG~~~i~l~~l~~~~------~~~W~~L~~~ 140 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQKAG------VDGWFKLLSQ 140 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTTCC------EEEEEECBCH
T ss_pred CCCCCEEEEEEEEHHHhCcCc------cCCeEEccCC
Confidence 8 8999999999999997642 5789999875
No 66
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.68 E-value=5.7e-16 Score=147.51 Aligned_cols=102 Identities=24% Similarity=0.386 Sum_probs=89.3
Q ss_pred eeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeeeCCCCCCeeccEEEEEecC--CCC
Q 004297 26 KLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN-----YKGTTRHFEKKTNPEWNQVFAFSKDR--IQS 98 (763)
Q Consensus 26 ~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~v~~--~~~ 98 (763)
++.+...+....+.|.|+|++|++|+..+..|.+||||++++++ .+++|++++++.||+|||+|.|.+.. +..
T Consensus 25 ~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~ 104 (166)
T 2cm5_A 25 KILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAK 104 (166)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGG
T ss_pred eEEEEEEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCC
Confidence 45555555667889999999999999999899999999999986 57899999999999999999999853 235
Q ss_pred ceEEEEEEeCCCC-CCeeeEEEEEEccccC
Q 004297 99 SVLEVTVKDKDFV-KDDFMGRVLFDLNEIP 127 (763)
Q Consensus 99 ~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~ 127 (763)
..|.|+|||++.. ++++||++.+++.++.
T Consensus 105 ~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 105 KSLDISVWDYDIGKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEETTCCH
T ss_pred CEEEEEEEECCCCCCCcEEEeEEEecccCC
Confidence 6899999999998 8999999999998753
No 67
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.67 E-value=3.3e-16 Score=148.11 Aligned_cols=119 Identities=29% Similarity=0.398 Sum_probs=96.7
Q ss_pred eeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeeeCCCCCCeeccEEEEEecC--CCC
Q 004297 26 KLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN-----YKGTTRHFEKKTNPEWNQVFAFSKDR--IQS 98 (763)
Q Consensus 26 ~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~v~~--~~~ 98 (763)
++.+...+.+..+.|.|+|++|++|+..+..|.+||||++++.+ .+++|++++++.||+|||+|.|.+.. +..
T Consensus 13 ~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~ 92 (159)
T 1tjx_A 13 DICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQK 92 (159)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGG
T ss_pred eEEEEEEEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCC
Confidence 45555555567789999999999999999889999999999963 46899999999999999999999853 235
Q ss_pred ceEEEEEEeCCCC-CCeeeEEEEEEcccc----------CCCCCCCCCCcCeEEEeecCC
Q 004297 99 SVLEVTVKDKDFV-KDDFMGRVLFDLNEI----------PKRVPPDSPLAPQWYRLEDRK 147 (763)
Q Consensus 99 ~~l~i~V~d~~~~-~d~~lG~~~i~l~~l----------~~~~~~~~~~~~~w~~L~~~~ 147 (763)
..|.|+|||++.. ++++||++.+++..+ .... .....+||+|....
T Consensus 93 ~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~---~~~~~~W~~L~~~~ 149 (159)
T 1tjx_A 93 VQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANP---RRPIAQWHTLQVEE 149 (159)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHST---TCCEEEEEECBCHH
T ss_pred cEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCC---CCeeeeEEECcCcc
Confidence 6899999999998 899999999999854 2111 12356899988653
No 68
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=2e-16 Score=147.45 Aligned_cols=117 Identities=25% Similarity=0.284 Sum_probs=95.2
Q ss_pred eeeeeecccCceeEEEEEEEEeecCCCC-CC------CCCCCcEEEEEECC---eeeeeeeeCCCCCCeeccEEEEEecC
Q 004297 26 KLTSTYDLVEQMQYLYVRVVKAKDLPPK-DV------TGSCDPYVEVKMGN---YKGTTRHFEKKTNPEWNQVFAFSKDR 95 (763)
Q Consensus 26 ~~~~~~~~~~~~~~L~v~v~~a~~L~~~-~~------~~~~dPyv~v~~~~---~~~kT~~~~~t~nP~Wne~f~f~v~~ 95 (763)
++.+...+....+.|.|+|++|++|+.. +. .+.+||||++++.+ ++++|++++++.||+|||+|.|.+..
T Consensus 14 ~l~~~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 93 (147)
T 2enp_A 14 MLHFSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPF 93 (147)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCH
T ss_pred EEEEEEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeCh
Confidence 4444444456778999999999999984 43 35899999999974 57899999999999999999999853
Q ss_pred --CCCceEEEEEEeCCCC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCC
Q 004297 96 --IQSSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (763)
Q Consensus 96 --~~~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (763)
+....|.|+|||++.. ++++||++.++|.++.... ....|+.|.++.
T Consensus 94 ~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~w~~L~~~~ 143 (147)
T 2enp_A 94 LEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVK-----GGHWWKALIPSG 143 (147)
T ss_dssp HHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTT-----CCCEEECCBCCC
T ss_pred HHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCC-----CccEEEEeecCC
Confidence 2246899999999988 8999999999999997553 246899998753
No 69
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.66 E-value=3.2e-16 Score=144.39 Aligned_cols=102 Identities=27% Similarity=0.453 Sum_probs=87.1
Q ss_pred eeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeeeCCCCCCeeccEEEEEecCC--CC
Q 004297 26 KLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN-----YKGTTRHFEKKTNPEWNQVFAFSKDRI--QS 98 (763)
Q Consensus 26 ~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~v~~~--~~ 98 (763)
++.+...+....+.|.|+|++|++|+..+..|.+||||++++.+ .+++|++++++.||+|||+|.|.+... ..
T Consensus 4 ~l~~sl~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~ 83 (138)
T 3n5a_A 4 ELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRE 83 (138)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGG
T ss_pred EEEEEEEEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCc
Confidence 34444444567789999999999999999889999999999975 478999999999999999999998532 24
Q ss_pred ceEEEEEEeCCCC-CCeeeEEEEEEccccC
Q 004297 99 SVLEVTVKDKDFV-KDDFMGRVLFDLNEIP 127 (763)
Q Consensus 99 ~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~ 127 (763)
..|.|+|||++.. +|++||++.+++.++.
T Consensus 84 ~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 84 TTIIITVMDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp EEEEEEEEECCSSSCCEEEEEEEESSSSCH
T ss_pred eEEEEEEEECCCCCCCcEEEEEEEccccCC
Confidence 6899999999998 8999999999998754
No 70
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.66 E-value=6.4e-16 Score=145.09 Aligned_cols=100 Identities=27% Similarity=0.394 Sum_probs=81.0
Q ss_pred eeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--Ce---eeeeeeeCCCCCCeeccEEEEEecCC--CC
Q 004297 26 KLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMG--NY---KGTTRHFEKKTNPEWNQVFAFSKDRI--QS 98 (763)
Q Consensus 26 ~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~--~~---~~kT~~~~~t~nP~Wne~f~f~v~~~--~~ 98 (763)
++.+...+....+.|.|+|++|++|+..+..+.+||||++++. +. +++|++++++.||+|||+|.|.+... ..
T Consensus 18 ~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~ 97 (153)
T 1w15_A 18 ELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEE 97 (153)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTT
T ss_pred EEEEEEEEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCc
Confidence 4555555556778999999999999999988999999999994 32 67999999999999999999998543 34
Q ss_pred ceEEEEEEeCCCC-CCeeeEEEEEEccc
Q 004297 99 SVLEVTVKDKDFV-KDDFMGRVLFDLNE 125 (763)
Q Consensus 99 ~~l~i~V~d~~~~-~d~~lG~~~i~l~~ 125 (763)
..|.|+|||++.. ++++||++.+++..
T Consensus 98 ~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 98 ISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp EEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred eEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 7899999999988 89999999999987
No 71
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.62 E-value=1.7e-15 Score=137.57 Aligned_cols=86 Identities=23% Similarity=0.388 Sum_probs=73.9
Q ss_pred cceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCEEEeeeeec-CCCCCccccEEEEEeeCCCcEEEEEEEeCCCCCC
Q 004297 361 IGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTII-DSPTPKWNEQYTWEVFDPCTVITIGVFDNCHLHG 439 (763)
Q Consensus 361 ~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~~~~~T~~~~-~t~~P~wne~~~~~v~~~~~~l~i~V~d~~~~~~ 439 (763)
.+.|.|+|++|++|.. .|.+||||++. ++..+|++++ +++||+|||.|.|.+.++...|.|+|||+| ++
T Consensus 4 ~~~L~V~V~~A~~l~~------~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~- 73 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA------QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI- 73 (131)
T ss_dssp CEEEEEEEEEEECSSC------GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SS-
T ss_pred ceEEEEEEEEeECCCC------CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CC-
Confidence 4899999999998852 46899999999 3345666665 699999999999999988788999999999 65
Q ss_pred CCCCCCCCCCccEEEEEecccccC
Q 004297 440 GDKAGGARDSRIGKVRIRLSTLET 463 (763)
Q Consensus 440 ~~~~~~~~d~~lG~v~i~l~~l~~ 463 (763)
+|++||++.|+|.++..
T Consensus 74 -------~dd~iG~~~i~l~~l~~ 90 (131)
T 2cjt_A 74 -------WDTMVGTVWIPLRTIRQ 90 (131)
T ss_dssp -------CEEEEEEEEEEGGGSCB
T ss_pred -------CCCeEEEEEEEHHHhhh
Confidence 79999999999999854
No 72
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.60 E-value=4.4e-15 Score=132.12 Aligned_cols=115 Identities=17% Similarity=0.235 Sum_probs=100.4
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeeC-CCCCCeeccEEEEEecC--CCCceEEEEEEeCCCC-CCe
Q 004297 39 YLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFE-KKTNPEWNQVFAFSKDR--IQSSVLEVTVKDKDFV-KDD 114 (763)
Q Consensus 39 ~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~~~~kT~~~~-~t~nP~Wne~f~f~v~~--~~~~~l~i~V~d~~~~-~d~ 114 (763)
-|+|+|.+|.+|+ |.+|||+++.+.+.+++|++++ ++.||+|||+|.|++.. ..+..|.|.|||++++ +++
T Consensus 22 sL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~nr 96 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSNK 96 (144)
T ss_dssp EEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCCE
T ss_pred EEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCCC
Confidence 4889999999998 5789999999999999999998 69999999999999843 3478999999999999 999
Q ss_pred eeEEEEEEccccCCCCCCCCCCcCeEEEeecCCCCccceEEEEEEEEcc
Q 004297 115 FMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVWMGT 163 (763)
Q Consensus 115 ~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~~~ 163 (763)
+||++.++|+++..... ..-+-+|.+.++....++|.+++.|.+
T Consensus 97 lIG~~~i~Lq~lv~~~~-----l~l~~~LvD~n~~~~~a~I~l~l~Y~p 140 (144)
T 3l9b_A 97 LIGTFRMVLQKVVEENR-----VEVSDTLIDDNNAIIKTSLSMEVRYQA 140 (144)
T ss_dssp EEEEEEEESHHHHHHSE-----EEEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred EEEEEEEEhHHhccCCe-----EEEeecccCCCCCccccEEEEEEEecC
Confidence 99999999999997642 224568888887777799999999876
No 73
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.60 E-value=6.3e-15 Score=133.81 Aligned_cols=88 Identities=28% Similarity=0.378 Sum_probs=73.7
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeeC-CCCCCeeccEEEEEecCCCCceEEEEEEeCCCC-CC
Q 004297 36 QMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFE-KKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDFV-KD 113 (763)
Q Consensus 36 ~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~~~~kT~~~~-~t~nP~Wne~f~f~v~~~~~~~l~i~V~d~~~~-~d 113 (763)
.++.|.|+|++|++|.. .|.+||||+++ .+..+|+++. ++.||+|||+|.|.+.+. ...|.|+|||++ . +|
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~~d 75 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LIWD 75 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-SSCE
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-CCCC
Confidence 35799999999998852 57899999999 3444565554 699999999999999764 567999999999 6 99
Q ss_pred eeeEEEEEEccccCCCC
Q 004297 114 DFMGRVLFDLNEIPKRV 130 (763)
Q Consensus 114 ~~lG~~~i~l~~l~~~~ 130 (763)
++||++.|+|.++....
T Consensus 76 d~iG~~~i~l~~l~~~~ 92 (131)
T 2cjt_A 76 TMVGTVWIPLRTIRQSN 92 (131)
T ss_dssp EEEEEEEEEGGGSCBCS
T ss_pred CeEEEEEEEHHHhhhcC
Confidence 99999999999987543
No 74
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.59 E-value=6e-15 Score=139.53 Aligned_cols=118 Identities=21% Similarity=0.324 Sum_probs=89.1
Q ss_pred cceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCEEEeeeeec-CCCCCccccEEEEEeeCCCcEEEEEEEeCCCCCC
Q 004297 361 IGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTII-DSPTPKWNEQYTWEVFDPCTVITIGVFDNCHLHG 439 (763)
Q Consensus 361 ~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~~~~~T~~~~-~t~~P~wne~~~~~v~~~~~~l~i~V~d~~~~~~ 439 (763)
.+.|.|+|++|++|.. .|++||||+++ .+..+|++++ +++||+|||.|.|.+.+....|.|+|||+| ++
T Consensus 13 ~~~L~V~V~~A~~l~~------~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~- 82 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDGA------QEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI- 82 (167)
T ss_dssp CCEEEEEEEEEECSSC------GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SS-
T ss_pred eEEEEEEEEEEECCCC------CCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CC-
Confidence 5899999999998842 47899999999 3346777776 699999999999999988889999999999 65
Q ss_pred CCCCCCCCCCccEEEEEecccccCCC------eEeeeEeeeeeCCC--Cc--ccceEEEEEEEEee
Q 004297 440 GDKAGGARDSRIGKVRIRLSTLETDR------VYTHSYPLLVLYPN--GV--KKMGEIHLAVRFTC 495 (763)
Q Consensus 440 ~~~~~~~~d~~lG~v~i~l~~l~~~~------~~~~~~~L~~~~~~--g~--~~~G~i~l~~~~~~ 495 (763)
+|++||++.|+|.++.... ....||++.....+ |. ...|.+.++++|..
T Consensus 83 -------~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e~ 141 (167)
T 2cjs_A 83 -------WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFEL 141 (167)
T ss_dssp -------CCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEC
T ss_pred -------CCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEeec
Confidence 7999999999999985432 33455555432211 11 12456777777743
No 75
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.59 E-value=7.3e-15 Score=130.69 Aligned_cols=118 Identities=16% Similarity=0.261 Sum_probs=101.8
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCEEEeeeeec-CCCCCccccEEEEEeeC---CCcEEEEEEEeCCCC
Q 004297 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTII-DSPTPKWNEQYTWEVFD---PCTVITIGVFDNCHL 437 (763)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~~~~~T~~~~-~t~~P~wne~~~~~v~~---~~~~l~i~V~d~~~~ 437 (763)
-.|+|.|.+|.||+ |++|||+++.+.+.+++|+++. .+.||+|||.|+|++.. ....|.|.|+|++.+
T Consensus 21 msL~V~l~~a~~Lp--------g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v 92 (144)
T 3l9b_A 21 MALIVHLKTVSELR--------GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKV 92 (144)
T ss_dssp EEEEEEEEEEESCC--------SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTT
T ss_pred EEEEEEEEEecCCC--------CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccc
Confidence 47899999999997 5799999999999999999998 59999999999999984 478999999999998
Q ss_pred CCCCCCCCCCCCccEEEEEecccccCCCeEeeeEeeeeeCCCCcccceEEEEEEEEeecc
Q 004297 438 HGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYPNGVKKMGEIHLAVRFTCSS 497 (763)
Q Consensus 438 ~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~~~~ 497 (763)
+ +|.+||++.|+|.++..+....-+-+|.+.+.+ ...+.|.++++|.++.
T Consensus 93 ~--------~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~--~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 93 F--------SNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNA--IIKTSLSMEVRYQAAD 142 (144)
T ss_dssp S--------CCEEEEEEEEESHHHHHHSEEEEEEEEECTTSC--EEEEEEEEEEEEEETT
T ss_pred c--------CCCEEEEEEEEhHHhccCCeEEEeecccCCCCC--ccccEEEEEEEecCCC
Confidence 7 899999999999999877766677788764432 2348899999987753
No 76
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.58 E-value=5.1e-15 Score=167.65 Aligned_cols=119 Identities=26% Similarity=0.440 Sum_probs=103.1
Q ss_pred CCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCEEEeeeeecCCCCCccccEEEEEeeCC-CcEEEEEEEeCCCC
Q 004297 359 SSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTIIDSPTPKWNEQYTWEVFDP-CTVITIGVFDNCHL 437 (763)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~~~~~T~~~~~t~~P~wne~~~~~v~~~-~~~l~i~V~d~~~~ 437 (763)
...|.|.|+|++|+||+++ |..|++||||++.+++..++|+++++++||.|||.|.|.+.++ ...|.|+|||+|.+
T Consensus 384 ~~~~~l~v~v~~a~~L~~~---d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKAC---KPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp --CEEEEEEEEEEESCCCC---STTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred CCCceEEEEeceeecCCCC---CCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 4568999999999999987 6678999999999999999999999999999999999999876 46899999999987
Q ss_pred CCCCCCCCCCCCccEEEEEecccccCCCe----EeeeEeeeeeCCCCcccceEEEEEEEEe
Q 004297 438 HGGDKAGGARDSRIGKVRIRLSTLETDRV----YTHSYPLLVLYPNGVKKMGEIHLAVRFT 494 (763)
Q Consensus 438 ~~~~~~~~~~d~~lG~v~i~l~~l~~~~~----~~~~~~L~~~~~~g~~~~G~i~l~~~~~ 494 (763)
+ +|++||++.++|.++..+.. ...|++|.. +..|+|++++++.
T Consensus 461 ~--------~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~------~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 461 S--------PDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHE------VPTGEVWVRFDLQ 507 (510)
T ss_dssp S--------SCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBS------SSSCEEEEEEEEE
T ss_pred C--------CCCceEEEEEEHHHhccccCCCCceeeeecCCC------CCCceEEEEEEEE
Confidence 6 89999999999999976543 678999853 2459999988764
No 77
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.57 E-value=1.6e-14 Score=160.95 Aligned_cols=113 Identities=19% Similarity=0.280 Sum_probs=97.5
Q ss_pred CCcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCEEEeeeeecCCCCCccccEEEEEeeC--CCcEEEEEEEeCCC
Q 004297 359 SSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTIIDSPTPKWNEQYTWEVFD--PCTVITIGVFDNCH 436 (763)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~~~~~T~~~~~t~~P~wne~~~~~v~~--~~~~l~i~V~d~~~ 436 (763)
...|.|+|.|++|+||+. |..|++||||+|.++++.+||+++++++||+|||.|.|.+.+ ....|.|+|||+|.
T Consensus 391 ~~~~~L~V~V~~A~~L~~----D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~ 466 (540)
T 3nsj_A 391 RGLAHLVVSNFRAEHLWG----DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY 466 (540)
T ss_dssp TTEEEEEEEEEEEESCCC----SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS
T ss_pred CcccEEEEEEEEccCCCc----ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC
Confidence 346899999999999986 556899999999999999999999999999999999998753 57889999999998
Q ss_pred CCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEeeeeeCCCCcccceEEEEEEEEeec
Q 004297 437 LHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYPNGVKKMGEIHLAVRFTCS 496 (763)
Q Consensus 437 ~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~~~ 496 (763)
.+ +||+||.+.++|.. | ....|.+|. .|.|++.+++++.
T Consensus 467 ~~--------~dD~LG~~~~~L~~---g-~~~~~~~l~---------~G~l~~~~~~~c~ 505 (540)
T 3nsj_A 467 GW--------DDDLLGSCDRSPHS---G-FHEVTCELN---------HGRVKFSYHAKCL 505 (540)
T ss_dssp SS--------CCEEEEEEEECCCS---E-EEEEEEECS---------SSEEEEEEEEEEC
T ss_pred CC--------CCCEEEEEEEEeeC---C-cEEEEEEcC---------CeEEEEEEEEEEC
Confidence 76 78999999999983 3 356788862 3999999888773
No 78
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.56 E-value=1.7e-14 Score=136.42 Aligned_cols=119 Identities=21% Similarity=0.257 Sum_probs=88.0
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeeC-CCCCCeeccEEEEEecCCCCceEEEEEEeCCCC-CC
Q 004297 36 QMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFE-KKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDFV-KD 113 (763)
Q Consensus 36 ~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~~~~kT~~~~-~t~nP~Wne~f~f~v~~~~~~~l~i~V~d~~~~-~d 113 (763)
.++.|+|+|++|+++. ..+.+||||+++ .+..+|+++. ++.||+|||+|.|.+.+. ...|.|+|||++ . +|
T Consensus 12 ~~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~~d 84 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LIWD 84 (167)
T ss_dssp CCCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC-SSCC
T ss_pred ceEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC-CCCC
Confidence 3679999999999884 257899999999 4445676665 699999999999999864 567999999999 6 99
Q ss_pred eeeEEEEEEccccCCCCCCCC--CCcCeEEEeecCCCC------ccceEEEEEEEEc
Q 004297 114 DFMGRVLFDLNEIPKRVPPDS--PLAPQWYRLEDRKGD------KVRGELMLAVWMG 162 (763)
Q Consensus 114 ~~lG~~~i~l~~l~~~~~~~~--~~~~~w~~L~~~~~~------~~~G~i~l~~~~~ 162 (763)
++||++.|+|.++..... +. ...+.|+.+....|+ ...|.+++.+++.
T Consensus 85 d~iG~~~i~L~~l~~~~~-~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e 140 (167)
T 2cjs_A 85 TMVGTVWIPLRTIRQSNE-EGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 140 (167)
T ss_dssp EEEEEEEEEGGGSCBCSS-CCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEE
T ss_pred ceEEEEEEEHHHhcccCc-CCcccceeeeeeeEcCCCCCCceEccccceEEEEEEee
Confidence 999999999999875431 11 122344554433332 1345577777764
No 79
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.51 E-value=7.9e-14 Score=155.33 Aligned_cols=111 Identities=23% Similarity=0.288 Sum_probs=94.8
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeeCCCCCCeeccEEEEEec-CCCCceEEEEEEeCCCC-C
Q 004297 35 EQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFEKKTNPEWNQVFAFSKD-RIQSSVLEVTVKDKDFV-K 112 (763)
Q Consensus 35 ~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~-~~~~~~l~i~V~d~~~~-~ 112 (763)
..++.|.|+|++|++|+. |..|.+||||+|++++++++|+++++++||+|||+|.|.+. ......|.|+|||+|.. +
T Consensus 391 ~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~ 469 (540)
T 3nsj_A 391 RGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWD 469 (540)
T ss_dssp TTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSC
T ss_pred CcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCC
Confidence 457899999999999998 88999999999999999999999999999999999999863 23578899999999998 8
Q ss_pred CeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCCCccceEEEEEEEEc
Q 004297 113 DDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVWMG 162 (763)
Q Consensus 113 d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~~ 162 (763)
||+||++.++|.. + ....|++|.. |+|.+++.+.
T Consensus 470 dD~LG~~~~~L~~---g------~~~~~~~l~~-------G~l~~~~~~~ 503 (540)
T 3nsj_A 470 DDLLGSCDRSPHS---G------FHEVTCELNH-------GRVKFSYHAK 503 (540)
T ss_dssp CEEEEEEEECCCS---E------EEEEEEECSS-------SEEEEEEEEE
T ss_pred CCEEEEEEEEeeC---C------cEEEEEEcCC-------eEEEEEEEEE
Confidence 8999999999872 2 1357887653 7888876543
No 80
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.48 E-value=1e-13 Score=156.88 Aligned_cols=123 Identities=28% Similarity=0.398 Sum_probs=105.5
Q ss_pred CceeEEEEEEEEccccCCCCCCCCCCcEEEEEECCEEEeeecccCCCCCccccceEEEEeeCCCCCeEEEEEEEccCCCC
Q 004297 197 PKLWYLRVNVIEAQDLQPTDKGRFPEVYVKAQLGNQALRTRVSASRTINPMWNEDLMFVAAEPFEEHLILTVEDRVAPNK 276 (763)
Q Consensus 197 p~~g~L~V~i~~a~~L~~~~~~~~~dpyv~v~l~~~~~kT~~~~~~t~nP~wne~f~f~~~~~~~~~L~i~V~d~d~~~~ 276 (763)
+..+.|+|+|++|++|+..+.+|.+||||++.++++.++|+++++ +.||.|||.|.|.+..+....|.|+|||+|..++
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~-t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~ 462 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQD-TLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSP 462 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSS-CSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSS
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCC-CCCCccCceEEEEecCCCCCEEEEEEEeCCCCCC
Confidence 456789999999999999999999999999999999999999987 9999999999999987777889999999999999
Q ss_pred CceeEEEEEeccccccccCCCCCCceeEEcccccccccccccCCceeceEEEEEEE
Q 004297 277 DEVLGKCMIPLQYVDKRLDHKPVNTRWYNLEKHIVVEGEKKKDTKFASRIHMRICL 332 (763)
Q Consensus 277 d~~iG~~~i~l~~l~~~~~~~~~~~~w~~L~~~~~~~~~~~~~~~~~G~l~l~l~~ 332 (763)
|++||++.+++.++............|+.|... ..|.|.+.+.+
T Consensus 463 ~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~------------~~G~i~l~~~l 506 (510)
T 3jzy_A 463 DDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV------------PTGEVWVRFDL 506 (510)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS------------SSCEEEEEEEE
T ss_pred CCceEEEEEEHHHhccccCCCCceeeeecCCCC------------CCceEEEEEEE
Confidence 999999999999987532222236789998764 36888887765
No 81
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.47 E-value=5e-15 Score=164.86 Aligned_cols=119 Identities=20% Similarity=0.355 Sum_probs=20.3
Q ss_pred cceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCE-EEeeeeecCC---CCCccccEEEEEeeCCCcEEEEEEEeC-C
Q 004297 361 IGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQK-WVRTRTIIDS---PTPKWNEQYTWEVFDPCTVITIGVFDN-C 435 (763)
Q Consensus 361 ~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~~-~~~T~~~~~t---~~P~wne~~~~~v~~~~~~l~i~V~d~-~ 435 (763)
.|.|+|+|++|+||+++ | ||||++.++++ +.||+++++| +||+|||.|.|.+......|.|+|||+ |
T Consensus 10 ~~~L~V~VieAk~L~~~---d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d 81 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPK---K-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSD 81 (483)
T ss_dssp EECC-----------------------------------------------------CCEECC-----------------
T ss_pred ccEEEEEEEEcCCcCCC---C-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCC
Confidence 47999999999999875 2 99999999886 6799999999 999999999999766578999999994 4
Q ss_pred C---CCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEeeeeeCC---------------------CCcccceEEEEEE
Q 004297 436 H---LHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYP---------------------NGVKKMGEIHLAV 491 (763)
Q Consensus 436 ~---~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~~~~~---------------------~g~~~~G~i~l~~ 491 (763)
. .+ +|++||++.|++.++..+....+||+|.+... +|.+..|.|+|++
T Consensus 82 ~~~~~~--------~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v 153 (483)
T 3bxj_A 82 KKRKKD--------KAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKA 153 (483)
T ss_dssp ---------------------------------CCEECC--------------------------------------CEE
T ss_pred ccccCC--------CCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEE
Confidence 2 33 78999999999999998888899999965443 1223468999999
Q ss_pred EEee
Q 004297 492 RFTC 495 (763)
Q Consensus 492 ~~~~ 495 (763)
+|.+
T Consensus 154 ~~~~ 157 (483)
T 3bxj_A 154 RYQT 157 (483)
T ss_dssp EEEE
T ss_pred Eeee
Confidence 9865
No 82
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.47 E-value=2.6e-13 Score=154.84 Aligned_cols=121 Identities=17% Similarity=0.267 Sum_probs=100.3
Q ss_pred CcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC-----EEEeeeeecCC-CCCccccEEEEEeeCC-CcEEEEEEE
Q 004297 360 SIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ-----KWVRTRTIIDS-PTPKWNEQYTWEVFDP-CTVITIGVF 432 (763)
Q Consensus 360 ~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~-----~~~~T~~~~~t-~~P~wne~~~~~v~~~-~~~l~i~V~ 432 (763)
..+.|+|+|++|++|++++. +..|.+||||+|.+.+ ...||++++++ +||+|||.|.|.+..+ ...|.|+||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~-~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~ 573 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNK-NKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVE 573 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSS-CSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccc-cccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEE
Confidence 56899999999999998732 1357899999999844 67999999997 9999999999999876 468999999
Q ss_pred eCCCCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEeeeeeCCCCcc-cceEEEEEEEEe
Q 004297 433 DNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYPNGVK-KMGEIHLAVRFT 494 (763)
Q Consensus 433 d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~~~~~~g~~-~~G~i~l~~~~~ 494 (763)
|+|..+ +|++||++.|+|..|..|. +|++|.+.. |.. ..|+|.+.++|.
T Consensus 574 D~D~~~--------~dd~iG~~~ipl~~L~~G~---r~v~L~d~~--g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 574 DYDSSS--------KNDFIGQSTIPWNSLKQGY---RHVHLLSKN--GDQHPSATLFVKISIQ 623 (624)
T ss_dssp ECCSSS--------CCEEEEEEEEEGGGBCCEE---EEEEEECTT--SCEEEEEEEEEEEEEE
T ss_pred EcCCCC--------CCceeEEEEEEHHHcCCCc---EEEeCCCCC--cCCCCceEEEEEEEEE
Confidence 999876 8999999999999998873 599997643 332 357888877763
No 83
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.47 E-value=4.5e-13 Score=152.85 Aligned_cols=119 Identities=23% Similarity=0.387 Sum_probs=102.6
Q ss_pred ceeEEEEEEEEeecCCCCCC--CCCCCcEEEEEECC-----eeeeeeeeCCC-CCCeeccEEEEEecCCCCceEEEEEEe
Q 004297 36 QMQYLYVRVVKAKDLPPKDV--TGSCDPYVEVKMGN-----YKGTTRHFEKK-TNPEWNQVFAFSKDRIQSSVLEVTVKD 107 (763)
Q Consensus 36 ~~~~L~v~v~~a~~L~~~~~--~~~~dPyv~v~~~~-----~~~kT~~~~~t-~nP~Wne~f~f~v~~~~~~~l~i~V~d 107 (763)
..+.|.|+|++|++|+..+. .+.+||||+|.+.+ .++||++++++ .||+|||+|.|.+..+....|.|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 45789999999999998873 68999999999954 57899999887 999999999999976556789999999
Q ss_pred CCCC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCCCc-cceEEEEEEEEc
Q 004297 108 KDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDK-VRGELMLAVWMG 162 (763)
Q Consensus 108 ~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~-~~G~i~l~~~~~ 162 (763)
++.. ++++||++.++|..|..+ .+|++|.+..|+. ..|.|.+.+.+.
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G--------~r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQG--------YRHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCE--------EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCC--------cEEEeCCCCCcCCCCceEEEEEEEEE
Confidence 9988 899999999999999754 3699999988775 457888887663
No 84
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.41 E-value=2.3e-13 Score=156.15 Aligned_cols=104 Identities=18% Similarity=0.244 Sum_probs=93.0
Q ss_pred CCcceEEEEEEEccCCCC---CccCCCCCCCCcEEEEEECC---EEEeeeeecCCCCCccccEEEEEeeC-CCcEEEEEE
Q 004297 359 SSIGVLELGILNAQGLMP---MKTKDGRGTTDAYCVAKYGQ---KWVRTRTIIDSPTPKWNEQYTWEVFD-PCTVITIGV 431 (763)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~---~~~~~~~g~~Dpyv~v~~~~---~~~~T~~~~~t~~P~wne~~~~~v~~-~~~~l~i~V 431 (763)
.+.|.|+|+|++|+||++ + |..|++||||++.+++ ..+||+++++++||+|||.|.|.+.+ ....|.|+|
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~---D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V 91 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFG---DMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITL 91 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHH---HHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEE
T ss_pred CCccEEEEEEEEEECCCCcccc---CCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEE
Confidence 456999999999999997 5 4458899999999984 67999999999999999999999987 467999999
Q ss_pred EeCCCCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEeee
Q 004297 432 FDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLL 474 (763)
Q Consensus 432 ~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~ 474 (763)
||+|.+ .|++||++.|+|.++..+.....|++|.
T Consensus 92 ~D~D~~---------~ddfIG~v~I~L~~L~~g~~~~~w~~L~ 125 (749)
T 1cjy_A 92 MDANYV---------MDETLGTATFTVSSMKVGEKKEVPFIFN 125 (749)
T ss_dssp EECCSS---------SCEEEEEECCBSTTSCTTCCCCEEEEET
T ss_pred EECCCC---------CCceeEEEEEEHHHcCCCCceEEEEecC
Confidence 999886 3789999999999999888889999994
No 85
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.40 E-value=3.7e-13 Score=154.33 Aligned_cols=107 Identities=28% Similarity=0.481 Sum_probs=95.0
Q ss_pred CceeEEEEEEEEeecCCC---CCCCCCCCcEEEEEECC---eeeeeeeeCCCCCCeeccEEEEEecCCCCceEEEEEEeC
Q 004297 35 EQMQYLYVRVVKAKDLPP---KDVTGSCDPYVEVKMGN---YKGTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDK 108 (763)
Q Consensus 35 ~~~~~L~v~v~~a~~L~~---~~~~~~~dPyv~v~~~~---~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~~l~i~V~d~ 108 (763)
.+.+.|.|+|++|++|+. .|..|.+||||++++++ .++||++++++.||+|||+|.|.+.......|.|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 457899999999999998 77788999999999985 678999999999999999999999876678899999999
Q ss_pred CCCCCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecC
Q 004297 109 DFVKDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDR 146 (763)
Q Consensus 109 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 146 (763)
|...|++||++.++|.++..+. ...+|++|...
T Consensus 95 D~~~ddfIG~v~I~L~~L~~g~-----~~~~w~~L~~~ 127 (749)
T 1cjy_A 95 NYVMDETLGTATFTVSSMKVGE-----KKEVPFIFNQV 127 (749)
T ss_dssp CSSSCEEEEEECCBSTTSCTTC-----CCCEEEEETTT
T ss_pred CCCCCceeEEEEEEHHHcCCCC-----ceEEEEecCCC
Confidence 9877999999999999997553 25689999864
No 86
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.24 E-value=6.5e-13 Score=147.81 Aligned_cols=100 Identities=21% Similarity=0.388 Sum_probs=13.1
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe-eeeeeeeCCC---CCCeeccEEEEEecCCCCceEEEEEEeC-C--
Q 004297 37 MQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNY-KGTTRHFEKK---TNPEWNQVFAFSKDRIQSSVLEVTVKDK-D-- 109 (763)
Q Consensus 37 ~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~~-~~kT~~~~~t---~nP~Wne~f~f~v~~~~~~~l~i~V~d~-~-- 109 (763)
.+.|+|+|++|++|+++| ||||+++++++ ..||+++++| .||+|||+|.|.+... ...|.|+|||. +
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~~d~~ 83 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRDSDKK 83 (483)
T ss_dssp EECC--------------------------------------------------CCEECC--------------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEecCCcc
Confidence 367999999999999876 99999999985 6799999998 9999999999996543 57899999994 4
Q ss_pred -CC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCC
Q 004297 110 -FV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (763)
Q Consensus 110 -~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (763)
.. +|++||++.|++.++..+. ...+||+|....
T Consensus 84 ~~~~~d~~lG~v~i~l~~l~~~~-----~~~~W~~L~~~~ 118 (483)
T 3bxj_A 84 RKKDKAGYVGLVTVPVATLAGRH-----FTEQWYPVTLPT 118 (483)
T ss_dssp ----------------------------CCEECC------
T ss_pred ccCCCCceEEEEEEEHHHhcCCC-----CCCeEEECCCCC
Confidence 24 8999999999999998653 357899996543
No 87
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.14 E-value=4.9e-11 Score=138.96 Aligned_cols=102 Identities=25% Similarity=0.441 Sum_probs=90.4
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE-----CCEEEeeeeecCCCCCccccEEEEEeeC--CCcEEEEEEEeC
Q 004297 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY-----GQKWVRTRTIIDSPTPKWNEQYTWEVFD--PCTVITIGVFDN 434 (763)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~-----~~~~~~T~~~~~t~~P~wne~~~~~v~~--~~~~l~i~V~d~ 434 (763)
+.|.|.|++|++|.++ |..|.+||||++.+ +....+|+++++++||+|||.|.|.+.. ....|.|+|||+
T Consensus 172 ~~L~V~v~~a~~L~~~---d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~ 248 (674)
T 3pfq_A 172 EVLIVVVRDAKNLVPM---DPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDW 248 (674)
T ss_dssp SEEEEEEEEEESCCCC---STTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEEC
T ss_pred ceeeeeeecccccCCC---CcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeec
Confidence 7899999999999988 66789999999988 4456899999999999999999999874 356799999999
Q ss_pred CCCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEeeee
Q 004297 435 CHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLV 475 (763)
Q Consensus 435 ~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~~ 475 (763)
|..+ +|++||.+.++++++..+. ..+||+|..
T Consensus 249 d~~~--------~dd~iG~~~i~l~~l~~~~-~~~w~~Lls 280 (674)
T 3pfq_A 249 DLTS--------RNDFMGSLSFGISELQKAG-VDGWFKLLS 280 (674)
T ss_dssp CSSS--------CCEECCBCCCBTTHHHHCC-EEEEEECBC
T ss_pred cccc--------ccccccccccchhhhccCC-cccceeecc
Confidence 9886 8999999999999998765 489999965
No 88
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.13 E-value=9.8e-11 Score=136.45 Aligned_cols=114 Identities=32% Similarity=0.580 Sum_probs=95.9
Q ss_pred eeeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeeeCCCCCCeeccEEEEEecCC-CCc
Q 004297 26 KLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKM-----GNYKGTTRHFEKKTNPEWNQVFAFSKDRI-QSS 99 (763)
Q Consensus 26 ~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~-----~~~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~~ 99 (763)
++.+.+.+. .+.|.|+|++|++|..+|..|.+||||++++ ...+.+|+++++++||.|||+|.|.+... ...
T Consensus 162 ~i~~~~~~~--~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~ 239 (674)
T 3pfq_A 162 RIYIQAHID--REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDR 239 (674)
T ss_dssp EEEEEEEEC--SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTC
T ss_pred cccccceec--cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccc
Confidence 344444443 4689999999999999999999999999999 33578999999999999999999998532 345
Q ss_pred eEEEEEEeCCCC-CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCC
Q 004297 100 VLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (763)
Q Consensus 100 ~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (763)
.|.|+|||++.. +|++||++.+++.++.... ..+|+.|....
T Consensus 240 ~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~------~~~w~~Lls~~ 282 (674)
T 3pfq_A 240 RLSVEIWDWDLTSRNDFMGSLSFGISELQKAG------VDGWFKLLSQE 282 (674)
T ss_dssp EEEEEEEECCSSSCCEECCBCCCBTTHHHHCC------EEEEEECBCTT
T ss_pred eeeeEEeecccccccccccccccchhhhccCC------cccceeecccc
Confidence 699999999998 9999999999999987542 47899998764
No 89
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.12 E-value=4e-10 Score=130.76 Aligned_cols=111 Identities=19% Similarity=0.311 Sum_probs=93.3
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-------eeeeeeeeCC-CCCCeeccE-EEEE-ecCCCCceEEEEEEe
Q 004297 38 QYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN-------YKGTTRHFEK-KTNPEWNQV-FAFS-KDRIQSSVLEVTVKD 107 (763)
Q Consensus 38 ~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~-------~~~kT~~~~~-t~nP~Wne~-f~f~-v~~~~~~~l~i~V~d 107 (763)
+.|.|+|++|++|+.. .+||||+|.+.+ .+++|+++.+ +.||+|||+ |.|. +..+....|.|+|||
T Consensus 650 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D 725 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSE 725 (816)
T ss_dssp EEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred eEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEe
Confidence 6899999999999753 589999999975 5679999975 699999998 9998 755555789999999
Q ss_pred CCCCCCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCCCccc-eEEEEEEEEcc
Q 004297 108 KDFVKDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVR-GELMLAVWMGT 163 (763)
Q Consensus 108 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~-G~i~l~~~~~~ 163 (763)
.+ +++||++.++|..|..+ -++++|.+..|+... +.|.+.+.+..
T Consensus 726 ~d---ddfiG~~~ipL~~L~~G--------yR~vpL~~~~g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 726 EN---GKFIGHRVMPLDGIKPG--------YRHVPLRNESNRPLGLASVFAHIVAKD 771 (816)
T ss_dssp TT---SCEEEEEEEESTTCCCE--------EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred cC---CCeeeEEEEEHHHcCCc--------ceEEEEeCCCCCCCCceEEEEEEEEEe
Confidence 85 79999999999998854 357899998887644 88888887764
No 90
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.11 E-value=3.1e-10 Score=132.27 Aligned_cols=111 Identities=21% Similarity=0.299 Sum_probs=93.0
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeeeeeCC-CCCCeecc-EEEEE-ecCCCCceEEEEEEeC
Q 004297 38 QYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN------YKGTTRHFEK-KTNPEWNQ-VFAFS-KDRIQSSVLEVTVKDK 108 (763)
Q Consensus 38 ~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~------~~~kT~~~~~-t~nP~Wne-~f~f~-v~~~~~~~l~i~V~d~ 108 (763)
..|.|+|++|++|+.. .+||||+|.+.+ .+++|+++.+ +.||+||| +|.|. +..+....|.|+|||.
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~ 800 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEE 800 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcC
Confidence 4799999999999853 589999999965 3579999975 69999999 69998 6555567899999998
Q ss_pred CCCCCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCCCc-cceEEEEEEEEcc
Q 004297 109 DFVKDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDK-VRGELMLAVWMGT 163 (763)
Q Consensus 109 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~-~~G~i~l~~~~~~ 163 (763)
+ +++||++.++|..|..+ -++++|.+..|+. ..|.|.+.+.+..
T Consensus 801 d---ddfiG~~~lpL~~L~~G--------yR~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 801 G---GKFVGHRILPVSAIRSG--------YHYVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp T---TEEEEEEEEETTTCCCE--------EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred C---ccEEeeEEEEHHHcCCC--------ceEEEecCCCCCccCceEEEEEEEEEe
Confidence 7 89999999999998754 3578999988875 5689999988764
No 91
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.07 E-value=7.4e-10 Score=129.39 Aligned_cols=110 Identities=21% Similarity=0.304 Sum_probs=89.9
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeee-eeC-CCCCCeecc-EEEE-EecCCCCceEEEEEE
Q 004297 37 MQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN------YKGTTR-HFE-KKTNPEWNQ-VFAF-SKDRIQSSVLEVTVK 106 (763)
Q Consensus 37 ~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~------~~~kT~-~~~-~t~nP~Wne-~f~f-~v~~~~~~~l~i~V~ 106 (763)
.+.|.|+|++|++|+. +.+||||+|.+.+ +++||+ +++ ++.||+||| +|.| .+..+....|.|+||
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~ 752 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVM 752 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEE
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEE
Confidence 4789999999999984 4689999999943 367899 885 469999999 7999 776555568999999
Q ss_pred eCCCCCCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCCCc-cceEEEEEEEE
Q 004297 107 DKDFVKDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDK-VRGELMLAVWM 161 (763)
Q Consensus 107 d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~-~~G~i~l~~~~ 161 (763)
|++ +++||++.++|..|..+ .+|++|.+..|.. ..+.|.+.+.+
T Consensus 753 D~d---~d~iG~~~ipl~~L~~G--------~r~v~L~~~~g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 753 EEG---NKFLGHRIIPINALNSG--------YHHLCLHSESNMPLTMPALFIFLEM 797 (799)
T ss_dssp ETT---TEEEEEEEEEGGGBCCE--------EEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred EeC---CCccceEeeehhhcCCC--------cEEEeccCCCCCCCCceEEEEEEEE
Confidence 987 79999999999999754 3689999887764 34777777765
No 92
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.07 E-value=6.2e-10 Score=129.18 Aligned_cols=110 Identities=20% Similarity=0.276 Sum_probs=88.7
Q ss_pred cceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC-------EEEeeeeecC-CCCCccccE-EEEE-eeCC-CcEEEE
Q 004297 361 IGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ-------KWVRTRTIID-SPTPKWNEQ-YTWE-VFDP-CTVITI 429 (763)
Q Consensus 361 ~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~-------~~~~T~~~~~-t~~P~wne~-~~~~-v~~~-~~~l~i 429 (763)
.+.|.|+|++|++|+. .++||||+|.+.+ +.+||+++++ ++||+|||. |.|. |..+ ...|.|
T Consensus 649 ~~~L~V~Visaq~L~~-------~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf 721 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSD-------KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRI 721 (816)
T ss_dssp CEEEEEEEEEEECCCS-------SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEE
T ss_pred ceEEEEEEEEcccCCC-------CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEE
Confidence 4789999999999974 2689999999854 5789999987 599999998 9998 7655 468999
Q ss_pred EEEeCCCCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEeeeeeCCCCcc-cceEEEEEEEEe
Q 004297 430 GVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYPNGVK-KMGEIHLAVRFT 494 (763)
Q Consensus 430 ~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~~~~~~g~~-~~G~i~l~~~~~ 494 (763)
.|||+ .|++||++.|+|+.|..|- +++||.+.. |.. ..++|.+.+.+.
T Consensus 722 ~V~D~------------dddfiG~~~ipL~~L~~Gy---R~vpL~~~~--g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 722 IVSEE------------NGKFIGHRVMPLDGIKPGY---RHVPLRNES--NRPLGLASVFAHIVAK 770 (816)
T ss_dssp EEEET------------TSCEEEEEEEESTTCCCEE---EEEEEECTT--SCEEEEEEEEEEEEEE
T ss_pred EEEec------------CCCeeeEEEEEHHHcCCcc---eEEEEeCCC--CCCCCceEEEEEEEEE
Confidence 99997 3579999999999999873 478997643 332 237788777765
No 93
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.06 E-value=4.3e-10 Score=131.17 Aligned_cols=109 Identities=18% Similarity=0.241 Sum_probs=87.7
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC------EEEeeeeecC-CCCCcccc-EEEEE-eeCC-CcEEEEEE
Q 004297 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ------KWVRTRTIID-SPTPKWNE-QYTWE-VFDP-CTVITIGV 431 (763)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~------~~~~T~~~~~-t~~P~wne-~~~~~-v~~~-~~~l~i~V 431 (763)
..|.|+|++|++|+. .++||||+|.+.+ ..+||+++.+ ++||+||| .|.|. |..+ ...|.|+|
T Consensus 725 ~~L~V~Visaq~L~~-------~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V 797 (885)
T 3ohm_B 725 NALRVKVISGQFLSD-------RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAA 797 (885)
T ss_dssp EEEEEEEEEEESCCS-------SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEE
T ss_pred eEEEEEEEEeccCcc-------cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEE
Confidence 489999999999974 2689999999854 2479999987 59999999 69998 6654 46899999
Q ss_pred EeCCCCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEeeeeeCCCCcc-cceEEEEEEEEe
Q 004297 432 FDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYPNGVK-KMGEIHLAVRFT 494 (763)
Q Consensus 432 ~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~~~~~~g~~-~~G~i~l~~~~~ 494 (763)
||+| |++||++.|+|..|..|- +++||.+.. |.. ..|+|.+.+.+.
T Consensus 798 ~D~d------------ddfiG~~~lpL~~L~~Gy---R~vpL~~~~--g~~l~~atLfv~i~~~ 844 (885)
T 3ohm_B 798 FEEG------------GKFVGHRILPVSAIRSGY---HYVCLRNEA--NQPLCLPALLIYTEAS 844 (885)
T ss_dssp EETT------------TEEEEEEEEETTTCCCEE---EEEEEECTT--SCEEEEEEEEEEEEEE
T ss_pred EcCC------------ccEEeeEEEEHHHcCCCc---eEEEecCCC--CCccCceEEEEEEEEE
Confidence 9973 579999999999998873 468886643 332 358888888875
No 94
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.01 E-value=1e-09 Score=128.15 Aligned_cols=110 Identities=16% Similarity=0.306 Sum_probs=86.8
Q ss_pred CcceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC------EEEeee-eecC-CCCCcccc-EEEE-EeeCC-CcEEE
Q 004297 360 SIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ------KWVRTR-TIID-SPTPKWNE-QYTW-EVFDP-CTVIT 428 (763)
Q Consensus 360 ~~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~------~~~~T~-~~~~-t~~P~wne-~~~~-~v~~~-~~~l~ 428 (763)
..|.|.|.|++|++|+. +++||||+|.+.+ +++||+ ++++ ++||+||| .|.| .|..+ -..|.
T Consensus 676 ~~~~L~V~Visa~~L~~-------~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr 748 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE-------RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLR 748 (799)
T ss_dssp TCEEEEEEEEEEESCCS-------SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEE
T ss_pred eeeeEEEEEEeccccCc-------cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEE
Confidence 45799999999999974 3699999998832 358999 8875 69999999 6999 78655 45899
Q ss_pred EEEEeCCCCCCCCCCCCCCCCccEEEEEecccccCCCeEeeeEeeeeeCCCCcc-cceEEEEEEEE
Q 004297 429 IGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYPNGVK-KMGEIHLAVRF 493 (763)
Q Consensus 429 i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~~~L~~~~~~g~~-~~G~i~l~~~~ 493 (763)
|.|||++ +++||.+.|+|+.|..| -+|++|.+.. |.. ..+.|.+.+++
T Consensus 749 ~~V~D~d------------~d~iG~~~ipl~~L~~G---~r~v~L~~~~--g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 749 VAVMEEG------------NKFLGHRIIPINALNSG---YHHLCLHSES--NMPLTMPALFIFLEM 797 (799)
T ss_dssp EEEEETT------------TEEEEEEEEEGGGBCCE---EEEEEEECTT--CCEEEEEEEEEEEEE
T ss_pred EEEEEeC------------CCccceEeeehhhcCCC---cEEEeccCCC--CCCCCceEEEEEEEE
Confidence 9999973 57999999999999887 3588996543 322 34777777765
No 95
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.86 E-value=3.1e-08 Score=85.33 Aligned_cols=106 Identities=14% Similarity=0.289 Sum_probs=83.2
Q ss_pred ceEEEEEEEccC--CCCCccCCCCCCCCcEEEEEECCEE----Eee-eeecCCCCCccccEEEEEeeCCCcEEEEEEEeC
Q 004297 362 GVLELGILNAQG--LMPMKTKDGRGTTDAYCVAKYGQKW----VRT-RTIIDSPTPKWNEQYTWEVFDPCTVITIGVFDN 434 (763)
Q Consensus 362 g~l~v~v~~a~~--L~~~~~~~~~g~~Dpyv~v~~~~~~----~~T-~~~~~t~~P~wne~~~~~v~~~~~~l~i~V~d~ 434 (763)
+.|+|.+.++.- |++ .....||||.|.+.... .+| .+.++|..|.||++|.-.|.+ ...|.|.||+.
T Consensus 6 ~flRi~~~~~~~~~~~~-----~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~ 79 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQA-----EDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLMRA 79 (126)
T ss_dssp CEEEEEEEEEECSSCCC-----SSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-TCEEEEEEEEE
T ss_pred ccEEeeeccccccccCC-----ccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-CEEEEEEEEcC
Confidence 577888766653 332 12359999999886543 255 778889999999999999887 67899999974
Q ss_pred CCCCCCCCCCCCCCCccEEEEEeccccc-----CCCeEeeeEeeeeeCCCCcccceEEEEEEEE
Q 004297 435 CHLHGGDKAGGARDSRIGKVRIRLSTLE-----TDRVYTHSYPLLVLYPNGVKKMGEIHLAVRF 493 (763)
Q Consensus 435 ~~~~~~~~~~~~~d~~lG~v~i~l~~l~-----~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~ 493 (763)
..++++.+.|.+.+|. .+....-|.+|. ..|+|++.+++
T Consensus 80 ------------a~~fvAn~tV~~edL~~~c~~~~g~~e~WvdLe--------P~Gkl~~~i~~ 123 (126)
T 1yrk_A 80 ------------AEEPVSEVTVGVSVLAERCKKNNGKAEFWLDLQ--------PQAKVLMSVQY 123 (126)
T ss_dssp ------------TTEEEEEEEEEHHHHHHHHHTTTTEEEEEEECB--------SSCEEEEEEEE
T ss_pred ------------CCCeeeEEEEEHHHHHhhhccCCCceEEEEecc--------cCcEEEEEEEE
Confidence 2379999999999996 466789999993 47999998886
No 96
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.82 E-value=3.5e-08 Score=86.16 Aligned_cols=110 Identities=15% Similarity=0.178 Sum_probs=84.9
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCEE----Eee-eeecCCCCCccccEEEEEeeCCCcEEEEEEEeCCC
Q 004297 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKW----VRT-RTIIDSPTPKWNEQYTWEVFDPCTVITIGVFDNCH 436 (763)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~~~~~----~~T-~~~~~t~~P~wne~~~~~v~~~~~~l~i~V~d~~~ 436 (763)
+.|+|.+.++.-.+-+. -.....||||.|.+.... .+| .++++|..|.||+.|.-.|.+ ...|.|.||+.
T Consensus 10 ~flRi~l~~~~~~~~~~--~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~-- 84 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQS--CQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-GRVMQIIVKGK-- 84 (138)
T ss_dssp CCEEEEEEEEECCCCCC--SCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-SCEEEEEEECS--
T ss_pred cceEEEeeccccCCCCC--cccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-CeEEEEEEEcC--
Confidence 67888887766432110 012369999999886542 577 777789999999999998877 67899999974
Q ss_pred CCCCCCCCCCCCCccEEEEEeccccc-----CCCeEeeeEeeeeeCCCCcccceEEEEEEEEe
Q 004297 437 LHGGDKAGGARDSRIGKVRIRLSTLE-----TDRVYTHSYPLLVLYPNGVKKMGEIHLAVRFT 494 (763)
Q Consensus 437 ~~~~~~~~~~~d~~lG~v~i~l~~l~-----~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~ 494 (763)
..++++.+.|.+.+|. .+....-|++| +..|+|++.+++.
T Consensus 85 ----------a~~fVAn~tV~~edL~~~ck~~~g~~e~WvdL--------eP~Gkl~v~i~~~ 129 (138)
T 2enj_A 85 ----------NVDLISETTVELYSLAERCRKNNGKTEIWLEL--------KPQGRMLMNARYF 129 (138)
T ss_dssp ----------SCSCCEEEEEESHHHHHHHHHTTTCEEEEEEC--------BSSCEEEEEEEEC
T ss_pred ----------CCCeeeEEEEEHHHHHhhhccCCCceEEEEec--------ccCcEEEEEEEEE
Confidence 2379999999999996 45678999999 3479999999883
No 97
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.76 E-value=4.4e-08 Score=84.40 Aligned_cols=114 Identities=16% Similarity=0.258 Sum_probs=85.4
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEECCee----eee-eeeCCCCCCeeccEEEEEecCCCCceEEEEEEeCCCCC
Q 004297 38 QYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYK----GTT-RHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDFVK 112 (763)
Q Consensus 38 ~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~~~~~----~kT-~~~~~t~nP~Wne~f~f~v~~~~~~~l~i~V~d~~~~~ 112 (763)
..|+|.+.++.-=.-+......||||.|.+.... .+| ...++|..|+|||+|.-.+.+ ...|.|.|++...
T Consensus 6 ~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~-- 81 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE-- 81 (126)
T ss_dssp CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT--
T ss_pred ccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC--
Confidence 4788888777642222233468999999998632 355 677889999999999999886 6889999997654
Q ss_pred CeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCCCccceEEEEEEEEc
Q 004297 113 DDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVWMG 162 (763)
Q Consensus 113 d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~~ 162 (763)
+|++.|+|.+++|..+.........-|+.|++. |.|++.+.+.
T Consensus 82 -~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP~------Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 -EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQPQ------AKVLMSVQYF 124 (126)
T ss_dssp -EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBSS------CEEEEEEEEE
T ss_pred -CeeeEEEEEHHHHHhhhccCCCceEEEEecccC------cEEEEEEEEe
Confidence 999999999999995411112346789999973 8899887653
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.69 E-value=5.1e-08 Score=85.10 Aligned_cols=114 Identities=17% Similarity=0.379 Sum_probs=86.7
Q ss_pred eEEEEEEEEeecCCCCC-CCCCCCcEEEEEECCe----eeee-eeeCCCCCCeeccEEEEEecCCCCceEEEEEEeCCCC
Q 004297 38 QYLYVRVVKAKDLPPKD-VTGSCDPYVEVKMGNY----KGTT-RHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDFV 111 (763)
Q Consensus 38 ~~L~v~v~~a~~L~~~~-~~~~~dPyv~v~~~~~----~~kT-~~~~~t~nP~Wne~f~f~v~~~~~~~l~i~V~d~~~~ 111 (763)
..|+|.+.+..--+.+. .....||||.|.+... ..+| ...++|..|+|||+|.-.+.+ ...|.|.|++...
T Consensus 10 ~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~- 86 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKNV- 86 (138)
T ss_dssp CCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSSC-
T ss_pred cceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCCC-
Confidence 47888888776543322 1346899999999863 2566 666779999999999999876 6889999996554
Q ss_pred CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCCCccceEEEEEEEEc
Q 004297 112 KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVWMG 162 (763)
Q Consensus 112 ~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~~ 162 (763)
+|++.|+|.+.+|..+.........-|+.|++. |.|++.+.+.
T Consensus 87 --~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP~------Gkl~v~i~~~ 129 (138)
T 2enj_A 87 --DLISETTVELYSLAERCRKNNGKTEIWLELKPQ------GRMLMNARYF 129 (138)
T ss_dssp --SCCEEEEEESHHHHHHHHHTTTCEEEEEECBSS------CEEEEEEEEC
T ss_pred --CeeeEEEEEHHHHHhhhccCCCceEEEEecccC------cEEEEEEEEE
Confidence 899999999999995411011346789999973 8899998775
No 99
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=89.51 E-value=0.92 Score=40.89 Aligned_cols=127 Identities=15% Similarity=0.115 Sum_probs=83.6
Q ss_pred cccCceeEEEEEEEEeecCCCC-CCCCCCCcE--EEEEECC-eeeeeeeeCCCCCCeeccEEEEEecC-------CCCce
Q 004297 32 DLVEQMQYLYVRVVKAKDLPPK-DVTGSCDPY--VEVKMGN-YKGTTRHFEKKTNPEWNQVFAFSKDR-------IQSSV 100 (763)
Q Consensus 32 ~~~~~~~~L~v~v~~a~~L~~~-~~~~~~dPy--v~v~~~~-~~~kT~~~~~t~nP~Wne~f~f~v~~-------~~~~~ 100 (763)
++.+.-+.+.|+|.++.--+.. ...+..+|. |.+.+-+ +.+.|.++. +.+|.+|-+-.|.+.. +.+..
T Consensus 12 ~l~~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~ 90 (156)
T 2yrb_A 12 HLERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNT 90 (156)
T ss_dssp SCCSSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCC
T ss_pred hccCCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCC
Confidence 3445556888999998631110 001334675 4444445 455666665 8899999999998742 12467
Q ss_pred EEEEEEeCCCCCCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCCC-ccceEEEEEEEEcc
Q 004297 101 LEVTVKDKDFVKDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGD-KVRGELMLAVWMGT 163 (763)
Q Consensus 101 l~i~V~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~-~~~G~i~l~~~~~~ 163 (763)
+.++++......-..+|.+.|+|.++..+.. ....-.+|....|. ..-|.|...+.+..
T Consensus 91 l~lELhqa~g~~~~tla~~~I~l~~lLe~~~----~i~g~~~L~g~~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 91 ITLEVHQAYSTEYETIAACQLKFHEILEKSG----RIFCTASLIGTKGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEEEEECSSCEEEEEEEEECCSHHHHCCS----CEEEEEEECBSSSCCTTSEEEEEEEEEEE
T ss_pred EEEEEEEeeCCCceEEEEEEEEhHHhhCcCC----ceEEEEEEEcCCCCcceEEEEEEEEEEec
Confidence 9999988755467899999999999986532 12344577776663 35688887776653
No 100
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=88.06 E-value=3.5 Score=48.69 Aligned_cols=106 Identities=15% Similarity=0.205 Sum_probs=69.3
Q ss_pred ecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----eeeeeeeCCCCCCeeccEEEEEe---cCCCCceE
Q 004297 31 YDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKM--GNY----KGTTRHFEKKTNPEWNQVFAFSK---DRIQSSVL 101 (763)
Q Consensus 31 ~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~--~~~----~~kT~~~~~t~nP~Wne~f~f~v---~~~~~~~l 101 (763)
.++.+ .+.|+|.++.++... ...+-||.+.+ |++ ..+|..+....+|.|||.+.|++ +-+.+..|
T Consensus 213 ~~~~~---~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L 286 (940)
T 2wxf_A 213 WSLEQ---PFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARL 286 (940)
T ss_dssp TTCCS---EEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEE
T ss_pred hhcCC---ceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEE
Confidence 45543 799999999998754 34577877665 553 34566565577899999999987 33457899
Q ss_pred EEEEEeCCCC-------------CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCCCccceEEEEEEEEc
Q 004297 102 EVTVKDKDFV-------------KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVWMG 162 (763)
Q Consensus 102 ~i~V~d~~~~-------------~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~~ 162 (763)
.|.||+.... .+..+|.++++|-+.. |.-.+|...+.+|-.
T Consensus 287 ~~ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~--------------------~~l~~G~~~l~lw~~ 340 (940)
T 2wxf_A 287 CFALYAVVEKAKKARSTKKKSKKADCPIAWANLMLFDYK--------------------DQLKTGERCLYMWPS 340 (940)
T ss_dssp EEEEEEEC----------------CEEEEEEEEESBCTT--------------------SBBCCEEEEEECEEC
T ss_pred EEEEEEecCCccCccccccccccccceEEEEeeeEECCc--------------------CccccCCEEEEEeeC
Confidence 9999995321 1335666666555433 322358888888863
No 101
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=87.76 E-value=2.1 Score=38.56 Aligned_cols=126 Identities=13% Similarity=0.208 Sum_probs=80.5
Q ss_pred CCcceEEEEEEEccCCCCCccCCCCCCCCc--EEEEEECCEEEeeeeecCCCCCccccEEEEEeeCC--------CcEEE
Q 004297 359 SSIGVLELGILNAQGLMPMKTKDGRGTTDA--YCVAKYGQKWVRTRTIIDSPTPKWNEQYTWEVFDP--------CTVIT 428 (763)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~Dp--yv~v~~~~~~~~T~~~~~t~~P~wne~~~~~v~~~--------~~~l~ 428 (763)
+.-+.++|+|.++. +.+. .....+..+| ||.+.+-+....+..+....+|.+|.+..|.|.-. ...+.
T Consensus 15 ~gEnlfEihi~~~~-~~~~-~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 15 RGENLFEIHINKVT-FSSE-VLQASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLVHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp SSCEEEEEEEEEEC-CCHH-HHHHHCSSCCEEEEEECSTTCCCEECCCEESSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred CCCcEEEEEEeEEE-EcHH-HHhhccccCCcEEEEEEEeceEeeecccccCCCCCcceEEEEEEEeCHHHHHHHhcCCEE
Confidence 44579999999987 4321 0000123455 45555545444444455589999999888887521 23688
Q ss_pred EEEEeCCCCCCCCCCCCCCCCccEEEEEeccccc-CCCeEeeeEeeeeeCCCCcccceEEEEEEEEeec
Q 004297 429 IGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLE-TDRVYTHSYPLLVLYPNGVKKMGEIHLAVRFTCS 496 (763)
Q Consensus 429 i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l~-~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~~~ 496 (763)
|++..... +.-+.||+++|+|.++. ....+.+..+|.+... +....|.|+..+++..+
T Consensus 93 lELhqa~g---------~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g-~~~~~G~LeywiRL~~P 151 (156)
T 2yrb_A 93 LEVHQAYS---------TEYETIAACQLKFHEILEKSGRIFCTASLIGTKG-DIPNFGTVEYWFRLRVS 151 (156)
T ss_dssp EEEEEECS---------SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSS-CCTTSEEEEEEEEEEEC
T ss_pred EEEEEeeC---------CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCC-CcceEEEEEEEEEEecc
Confidence 88887532 14569999999999975 3344566678866432 21346999999988654
No 102
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=83.56 E-value=7.4 Score=46.34 Aligned_cols=106 Identities=16% Similarity=0.234 Sum_probs=70.2
Q ss_pred ecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----eeeeeeeCCCCCCeeccEEEEEe---cCCCCceE
Q 004297 31 YDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKM--GNY----KGTTRHFEKKTNPEWNQVFAFSK---DRIQSSVL 101 (763)
Q Consensus 31 ~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dPyv~v~~--~~~----~~kT~~~~~t~nP~Wne~f~f~v---~~~~~~~l 101 (763)
.++.+ .+.|+|.++.++.... ....+-||.+.+ |++ ..+|+.+. ..+|.|||.+.|++ +-+....|
T Consensus 351 w~~~~---~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL 425 (1091)
T 3hhm_A 351 WVINS---ALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARL 425 (1091)
T ss_dssp GGCCS---EEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEE
T ss_pred hhCCC---CEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEE
Confidence 45543 6899999999886433 334677888877 442 34455444 46788999999987 33457899
Q ss_pred EEEEEeCCCC-----CCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCCCccceEEEEEEEE
Q 004297 102 EVTVKDKDFV-----KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVWM 161 (763)
Q Consensus 102 ~i~V~d~~~~-----~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~ 161 (763)
.|.||+.... ....+|-+++.|-+.. |.-.+|...+.+|-
T Consensus 426 ~~tl~~~~~~~~~~~~~~~lg~~n~~lfd~~--------------------~~L~~G~~~L~lW~ 470 (1091)
T 3hhm_A 426 CLSICSVKGRKGAKEEHCPLAWGNINLFDYT--------------------DTLVSGKMALNLWP 470 (1091)
T ss_dssp EEEECCCCCCC-------CCEEEEEESBCTT--------------------CBBCCEEEEEECEE
T ss_pred EEEEEEecCccCcccccceeEEeeeeeEccC--------------------CeEEcCCeEEEeec
Confidence 9999986642 2246777777666543 22224888888885
No 103
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=83.10 E-value=4.6 Score=47.67 Aligned_cols=94 Identities=12% Similarity=0.231 Sum_probs=62.9
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE--CCEE----EeeeeecCCCCCccccEEEEEee--C-C-CcEEEEEE
Q 004297 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY--GQKW----VRTRTIIDSPTPKWNEQYTWEVF--D-P-CTVITIGV 431 (763)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~--~~~~----~~T~~~~~t~~P~wne~~~~~v~--~-~-~~~l~i~V 431 (763)
..++|.|..+.++... ..++-||.+.+ |++. ..|..+....+|.|||-++|++. + | ...|.|.|
T Consensus 217 ~~f~i~i~~~~~~~~~------~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti 290 (940)
T 2wxf_A 217 QPFSIELIEGRKVNAD------ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFAL 290 (940)
T ss_dssp SEEEEEEEEEECCCC---------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEE
T ss_pred CceEEEEEEecccCCC------CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEE
Confidence 6899999999999642 34678888755 7764 45555555778999999998877 3 3 77999999
Q ss_pred EeCCCCCCC---CC-CCCCCCCccEEEEEecccc
Q 004297 432 FDNCHLHGG---DK-AGGARDSRIGKVRIRLSTL 461 (763)
Q Consensus 432 ~d~~~~~~~---~~-~~~~~d~~lG~v~i~l~~l 461 (763)
|+......| .+ .....+..||.+.++|-+-
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 291 YAVVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EEEC----------------CEEEEEEEEESBCT
T ss_pred EEecCCccCccccccccccccceEEEEeeeEECC
Confidence 996431001 00 0111356999999999874
No 104
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=83.07 E-value=15 Score=35.03 Aligned_cols=75 Identities=19% Similarity=0.291 Sum_probs=47.6
Q ss_pred eeeeeeeCCCCCCeeccEEEEEec--CCCCceEEEEEEeCCCCCCeeeEEEEEEccccCCCCCCCCCCcCeEEEeecCCC
Q 004297 71 KGTTRHFEKKTNPEWNQVFAFSKD--RIQSSVLEVTVKDKDFVKDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKG 148 (763)
Q Consensus 71 ~~kT~~~~~t~nP~Wne~f~f~v~--~~~~~~l~i~V~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 148 (763)
..+|.+.+.+.+|.|+|++-+.+. .....-|.|++++...- +. .+ ..+.+..-.|++|....|
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~-~k-------------~d-k~E~pfg~a~lPL~~~dG 142 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQ-DS-------------KD-KSEKIFALAFVKLMRYDG 142 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCC-SS-------------CC-CCCCEEEEEEEESBCTTS
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEeccc-cc-------------cc-ccCCeeEEEEEEcccCCC
Confidence 457788888999999999988873 34567899999887653 10 00 111233445777776554
Q ss_pred Cc-cceEEEEEEE
Q 004297 149 DK-VRGELMLAVW 160 (763)
Q Consensus 149 ~~-~~G~i~l~~~ 160 (763)
.. ..|.-.|-++
T Consensus 143 ~~L~DG~H~L~vy 155 (220)
T 3l4c_A 143 TTLRDGEHDLIVY 155 (220)
T ss_dssp CBCCSEEEEEEEE
T ss_pred cEEccCCEEEEEE
Confidence 42 3466666554
No 105
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=81.74 E-value=4.4 Score=48.27 Aligned_cols=92 Identities=20% Similarity=0.304 Sum_probs=62.1
Q ss_pred cceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE--CCEE----EeeeeecCCCCCccccEEEEEee--C-C-CcEEEEE
Q 004297 361 IGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY--GQKW----VRTRTIIDSPTPKWNEQYTWEVF--D-P-CTVITIG 430 (763)
Q Consensus 361 ~g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~--~~~~----~~T~~~~~t~~P~wne~~~~~v~--~-~-~~~l~i~ 430 (763)
...++|+|..+.++... .....+-||.+.+ |++. .+|+.+. ..+|.|||-++|++. + | ...|.|+
T Consensus 354 ~~~f~v~i~~~~~~n~~----~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~t 428 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVN----IRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLS 428 (1091)
T ss_dssp CSEEEEEEEEESCCCCC----CSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEE
T ss_pred CCCEEEEEEEecCCCCC----ccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEE
Confidence 36899999999988642 2234678988866 6543 3444333 457889999888876 3 3 7899999
Q ss_pred EEeCCCCCCCCCCCCCCCCccEEEEEecccc
Q 004297 431 VFDNCHLHGGDKAGGARDSRIGKVRIRLSTL 461 (763)
Q Consensus 431 V~d~~~~~~~~~~~~~~d~~lG~v~i~l~~l 461 (763)
||+..... + +...+..||.+.++|-+-
T Consensus 429 l~~~~~~~-~---~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 429 ICSVKGRK-G---AKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp ECCCCCCC-----------CCEEEEEESBCT
T ss_pred EEEecCcc-C---cccccceeEEeeeeeEcc
Confidence 99975421 0 011456899999999875
No 106
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=77.29 E-value=2.6 Score=50.39 Aligned_cols=94 Identities=17% Similarity=0.227 Sum_probs=60.3
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEE--EECCEE----EeeeeecCCCCCccccEEEEEee--C-C-CcEEEEEE
Q 004297 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVA--KYGQKW----VRTRTIIDSPTPKWNEQYTWEVF--D-P-CTVITIGV 431 (763)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v--~~~~~~----~~T~~~~~t~~P~wne~~~~~v~--~-~-~~~l~i~V 431 (763)
..++|.|..+.++... ..++-||.+ ..|++. .+|..+..+.+|.|||-++|++. + | ...|.|.|
T Consensus 353 ~~f~i~i~~~~~~~~~------~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti 426 (1092)
T 2y3a_A 353 NPFQITLVKGNKLNTE------ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAV 426 (1092)
T ss_dssp SEEEEEECCCCCCCCC------SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEEC
T ss_pred CCEEEEEEEeccCCCC------CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEE
Confidence 6899999999998642 346778776 447765 34555555678999999888876 3 3 77999999
Q ss_pred EeCCCCCCCCC--------------CCCCCCCccEEEEEecccc
Q 004297 432 FDNCHLHGGDK--------------AGGARDSRIGKVRIRLSTL 461 (763)
Q Consensus 432 ~d~~~~~~~~~--------------~~~~~d~~lG~v~i~l~~l 461 (763)
|+......+.+ ...+.+..||.+.++|-+-
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 470 (1092)
T 2y3a_A 427 YAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDF 470 (1092)
T ss_dssp CCC------------------------------CCEEEEESBCT
T ss_pred EEecCccccccccccccccccccccccccccceeEEEeeeeECC
Confidence 99743211111 0112345899999999874
No 107
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=73.76 E-value=9.2 Score=36.49 Aligned_cols=58 Identities=7% Similarity=0.059 Sum_probs=40.9
Q ss_pred EEeeeeecCCCCCccccEEEEEeeC---CCcEEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecc
Q 004297 398 WVRTRTIIDSPTPKWNEQYTWEVFD---PCTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLS 459 (763)
Q Consensus 398 ~~~T~~~~~t~~P~wne~~~~~v~~---~~~~l~i~V~d~~~~~~~~~~~~~~d~~lG~v~i~l~ 459 (763)
.++|.+.+.+.+|.|+|.+.+.+.- +..-|.+++++..... + ++..+..+|.+-++|-
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~---k-~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQD---S-KDKSEKIFALAFVKLM 138 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCS---S-CCCCCCEEEEEEEESB
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccc---c-ccccCCeeEEEEEEcc
Confidence 4889999999999999999998873 3668999988865321 0 0112346677666654
No 108
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=72.99 E-value=20 Score=42.46 Aligned_cols=70 Identities=17% Similarity=0.171 Sum_probs=46.4
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe---eeeeeeeCCCCCCeeccEEEEEe---cCCCCceEEEEEEeCC
Q 004297 39 YLYVRVVKAKDLPPKDVTGSCDPYVEVKM--GNY---KGTTRHFEKKTNPEWNQVFAFSK---DRIQSSVLEVTVKDKD 109 (763)
Q Consensus 39 ~L~v~v~~a~~L~~~~~~~~~dPyv~v~~--~~~---~~kT~~~~~t~nP~Wne~f~f~v---~~~~~~~l~i~V~d~~ 109 (763)
.++|+|.++....... +..++-||++.+ |++ ..+|..+.-+.+|.|||.+.|++ +-+.+..|.|+||+..
T Consensus 219 ~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 219 KFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp EEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred ceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 5788888887522111 234567777654 553 23455555567899999999986 3345789999999853
No 109
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=70.60 E-value=14 Score=43.74 Aligned_cols=96 Identities=14% Similarity=0.129 Sum_probs=59.4
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE--CCEE---EeeeeecCCCCCccccEEEEEee--C-C-CcEEEEEEE
Q 004297 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY--GQKW---VRTRTIIDSPTPKWNEQYTWEVF--D-P-CTVITIGVF 432 (763)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~g~~Dpyv~v~~--~~~~---~~T~~~~~t~~P~wne~~~~~v~--~-~-~~~l~i~V~ 432 (763)
..++|.|.++...... ....++-||.+.+ |++. .+|..+.-+.+|.|||-++|++. + | ...|.|+||
T Consensus 218 ~~f~i~i~~~~~~~~~----~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 293 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLP----RTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIY 293 (961)
T ss_dssp SEEEEEEEEEECSSCC----TTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred CceEEEEeeccccccc----CCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEE
Confidence 5788888888652110 1135678888744 7754 34444444668999999888877 3 3 779999999
Q ss_pred eCCCCCCCCC--------CCCCCCCccEEEEEecccc
Q 004297 433 DNCHLHGGDK--------AGGARDSRIGKVRIRLSTL 461 (763)
Q Consensus 433 d~~~~~~~~~--------~~~~~d~~lG~v~i~l~~l 461 (763)
+....+...+ ..+++...||.+.++|-+-
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 294 CGAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp EEEC--------------------CEEEEEEEESBCT
T ss_pred ecccCccccccccccccccccccceeEEEEeeeeecC
Confidence 8643210000 0122456899999999875
No 110
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=65.74 E-value=6.8 Score=46.89 Aligned_cols=68 Identities=18% Similarity=0.188 Sum_probs=49.5
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEE--EECCe----eeeeeeeCCCCCCeeccEEEEEe---cCCCCceEEEEEEeCC
Q 004297 39 YLYVRVVKAKDLPPKDVTGSCDPYVEV--KMGNY----KGTTRHFEKKTNPEWNQVFAFSK---DRIQSSVLEVTVKDKD 109 (763)
Q Consensus 39 ~L~v~v~~a~~L~~~~~~~~~dPyv~v--~~~~~----~~kT~~~~~t~nP~Wne~f~f~v---~~~~~~~l~i~V~d~~ 109 (763)
.+.|+|..+.++... ...+-||.+ .-|++ ..+|+.+....+|.|||.+.|++ +-+.+..|.|+||+..
T Consensus 354 ~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~~ 430 (1092)
T 2y3a_A 354 PFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAVL 430 (1092)
T ss_dssp EEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC-
T ss_pred CEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEec
Confidence 799999999998754 345677664 44663 34466555577899999999987 2345789999999974
No 111
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=32.11 E-value=45 Score=22.15 Aligned_cols=19 Identities=16% Similarity=0.244 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 004297 677 RIQTVVGDLATQGERLQSL 695 (763)
Q Consensus 677 ~vQ~~~~~~a~~~e~~~~l 695 (763)
++|++-+.+|+.++|||.|
T Consensus 7 ~mq~LNdrlAsyidkVR~L 25 (39)
T 1gk7_A 7 ELQELNDRFANYIDKVRFL 25 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 5788999999999999976
No 112
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=29.86 E-value=1.4e+02 Score=23.86 Aligned_cols=37 Identities=16% Similarity=0.315 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhH
Q 004297 668 YDRLRSIAGRIQTVVGDLATQGERLQSLLSWRDPRAT 704 (763)
Q Consensus 668 ~~~l~~~~~~vQ~~~~~~a~~~e~~~~l~~w~~p~~t 704 (763)
++.|.+-...+++.-..+.....+++.-+-|++-+..
T Consensus 35 L~~L~~kt~~L~~~s~~F~~~A~~l~rkmwwkn~K~~ 71 (91)
T 3hd7_A 35 LSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMM 71 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444555555555556666667778775443
Done!