Your job contains 1 sequence.
>004300
MISRIMFADDESDIENAFKRAMPWLGDDFGMKDATSSIFPGLSLVQWMSMQQNNQFPAAQ
SGFFPSMVSSTGLHSNFGTDDPSKLLNFQASALAAPNLQFSKANPQNQVNQLPQSPIAWT
QQQQLQHLLQNPLNQQQQQHPQLHQQRQQQQQLLHPQQSQQQQQQQQNHHHHNQQPPPPP
QLQPSPTPPHSQSQSQSPVPQRPQQQPQQQQQQPQQQIFLPTHVNNGVLVPNANQNVQQP
TVYSQLQQPQLLTSNTQAPQGILSNNKNSYQLTSLPQDSQFQQQMEQSTGPLQRQQQQSQ
LQQSSLQFLQQSLAQRAQQQPQVQQLAQQSMSDQQLQSQLQQKLQQQQQQQLLSPAGSLL
QPQLLQQQLAHQQNQQLSQLPPSQNHQQQLSNNLSASVLVQPQQLPMNQPQNQNRPLTGT
RAHSNHTDGDAPSCSTSPSSNNCQISPSNFLNRNQQGPAMLMGDSVVEPSSNLVQELHSK
SDARIKHELPISKGPEHLKYNGSMTDQVEASSSGTSYCLDPGNIQQNFSLPTYCLDGDTQ
SHPRNSLPFVANIDGMAPDTLLSRGYDSQKDLHNLLSNYGGTPRDIETELSTAAISSQSF
AVPNIPFKPACSNEVGINEAGVLGNGLWANQTQRMRTFTKVQKRGSVGRSIDVTRYKGYD
ELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWDEFVSCVQSIKILSSAE
VQQMSLDGDLGNLPVPNQACSGSDSGNAWRHYDDNSAASFNR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004300
(762 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2202205 - symbol:ARF19 "auxin response factor ... 1109 5.5e-151 3
TAIR|locus:2035454 - symbol:MP "MONOPTEROS" species:3702 ... 367 2.3e-31 1
TAIR|locus:2204237 - symbol:ARF6 "auxin response factor 6... 327 1.3e-26 2
TAIR|locus:2152642 - symbol:ARF8 "auxin response factor 8... 296 9.0e-24 2
TAIR|locus:2175098 - symbol:ARF4 "auxin response factor 4... 232 5.5e-16 1
TAIR|locus:2174013 - symbol:ARF2 "auxin response factor 2... 226 2.9e-15 1
TAIR|locus:2025991 - symbol:ARF1 "auxin response factor 1... 214 4.0e-14 1
TAIR|locus:2138096 - symbol:ARF9 "auxin response factor 9... 213 4.7e-14 1
TAIR|locus:2039124 - symbol:ARF11 "auxin response factor ... 207 1.2e-13 2
TAIR|locus:2076765 - symbol:ARF18 "auxin response factor ... 207 2.0e-13 1
TAIR|locus:2014731 - symbol:ARF14 "auxin response factor ... 204 1.0e-12 2
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 194 5.4e-12 3
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 192 8.4e-12 1
TAIR|locus:2026145 - symbol:ARF12 "auxin response factor ... 183 7.9e-11 2
TAIR|locus:2036288 - symbol:ARF22 "auxin response factor ... 174 5.1e-10 2
TAIR|locus:2170862 - symbol:ATAUX2-11 "AT5G43700" species... 141 8.3e-09 1
UNIPROTKB|Q6K846 - symbol:IAA9 "Auxin-responsive protein ... 139 1.4e-08 1
TAIR|locus:2180557 - symbol:IAA28 "AT5G25890" species:370... 137 2.2e-08 1
TAIR|locus:2008991 - symbol:ARF13 "AUXIN RESPONSE FACTOR ... 159 3.1e-08 1
UNIPROTKB|Q7Y1H8 - symbol:IAA14 "Auxin-responsive protein... 137 2.0e-07 1
TAIR|locus:2129910 - symbol:IAA1 "indole-3-acetic acid in... 126 3.4e-07 1
TAIR|locus:2090527 - symbol:IAA31 "indole-3-acetic acid i... 125 4.4e-07 1
UNIPROTKB|Q75GK1 - symbol:IAA12 "Auxin-responsive protein... 136 1.2e-06 1
TAIR|locus:2197838 - symbol:IAA12 "indole-3-acetic acid i... 130 7.8e-06 1
UNIPROTKB|P49679 - symbol:IAA4/5 "Auxin-induced protein I... 125 8.3e-06 1
UNIPROTKB|Q652A1 - symbol:IAA26 "Auxin-responsive protein... 113 8.5e-06 1
TAIR|locus:2051154 - symbol:IAA13 "auxin-induced protein ... 126 2.6e-05 1
TAIR|locus:2098023 - symbol:IAA30 "indole-3-acetic acid i... 118 3.0e-05 1
TAIR|locus:2041324 - symbol:IAA20 "indole-3-acetic acid i... 117 5.1e-05 1
TAIR|locus:2196573 - symbol:IAA5 "indole-3-acetic acid in... 114 5.3e-05 1
TAIR|locus:2094578 - symbol:IAA2 "indole-3-acetic acid in... 116 6.5e-05 1
TAIR|locus:2018379 - symbol:SHY2 "SHORT HYPOCOTYL 2" spec... 118 7.2e-05 1
UNIPROTKB|Q75GB1 - symbol:IAA17 "Auxin-responsive protein... 122 8.4e-05 1
UNIPROTKB|Q6ZL57 - symbol:IAA24 "Auxin-responsive protein... 120 8.5e-05 1
TAIR|locus:2090141 - symbol:IAA19 "indole-3-acetic acid i... 116 0.00016 1
TAIR|locus:2018374 - symbol:AXR3 "AT1G04250" species:3702... 86 0.00024 2
UNIPROTKB|Q9LG86 - symbol:IAA2 "Auxin-responsive protein ... 117 0.00025 1
UNIPROTKB|Q5NB25 - symbol:IAA3 "Auxin-responsive protein ... 118 0.00026 1
TAIR|locus:2088324 - symbol:PAP1 "phytochrome-associated ... 118 0.00027 1
TAIR|locus:2196184 - symbol:IAA34 "indole-3-acetic acid i... 110 0.00063 1
TAIR|locus:2195820 - symbol:IAA18 "indole-3-acetic acid i... 113 0.00096 1
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 1109 (395.4 bits), Expect = 5.5e-151, Sum P(3) = 5.5e-151
Identities = 225/357 (63%), Positives = 270/357 (75%)
Query: 421 RAHSNHTDGDA---XXXXXXXXXXXXQISPSNFLNRNQQ-GPAMLMG--DSVVEPSSNLV 474
R+HS HTDG+A +SP+NFL+RNQQ G A + DSV E +SN V
Sbjct: 735 RSHSGHTDGEAPSCSTSPSANNTGHDNVSPTNFLSRNQQQGQAASVSASDSVFERASNPV 794
Query: 475 QELHSKSDARIKHELPISKGP-EHLKYNGSMTDQVEASSSGTSYCLD---PGNIQQNFSL 530
QEL++K+++RI + K EH ++ ++TDQ++ S++GT+YC D P QQ F L
Sbjct: 795 QELYTKTESRISQGMMNMKSAGEHFRFKSAVTDQIDVSTAGTTYCPDVVGPVQQQQTFPL 854
Query: 531 PTYCLDGDTQSH-PRNSLPFVANIDGMAPDTLLSRGYDSQKDLHNLLSNYGGTPRDIETE 589
P++ DGD QSH PRN+L F N++ + D L Y SQKD NL+ NYG TPRDIETE
Sbjct: 855 PSFGFDGDCQSHHPRNNLAFPGNLEAVTSDPL----Y-SQKDFQNLVPNYGNTPRDIETE 909
Query: 590 LSTAAISSQSFAVPNIPFKPACSNEVG-INEAGVL-GNGLWANQTQRMRTFTKVQKRGSV 647
LS+AAISSQSF +P+IPFKP CSNEVG IN++G++ G GLW NQTQRMRT+TKVQKRGSV
Sbjct: 910 LSSAAISSQSFGIPSIPFKPGCSNEVGGINDSGIMNGGGLWPNQTQRMRTYTKVQKRGSV 969
Query: 648 GRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWDEFV 707
GRSIDVTRY GYDELRHDLARMFGIEGQLEDP +SDWKLVY DHENDILLVGDDPW+EFV
Sbjct: 970 GRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEFV 1029
Query: 708 SCVQSIKILSSAEVQQMSLDGDLGNLPVPNQACSGSDSGNAWR-HYDDNSAA-SFNR 762
+CVQ+IKILSS EVQQMSLDGDL +P NQACS +DSGNAW+ HY+D SAA SFNR
Sbjct: 1030 NCVQNIKILSSVEVQQMSLDGDLAAIPTTNQACSETDSGNAWKVHYEDTSAAASFNR 1086
Score = 341 (125.1 bits), Expect = 5.5e-151, Sum P(3) = 5.5e-151
Identities = 65/107 (60%), Positives = 82/107 (76%)
Query: 9 DDESDIENAFKRAMPWLGDDFGMKDATSSIFPGLSLVQWMSMQQNNQFPAAQSGFFPSMV 68
DDE D+ENAFKRAMPW+G+DFGMKDA SS+FPGLSLVQWMSMQQNN + + PS +
Sbjct: 381 DDELDMENAFKRAMPWMGEDFGMKDAQSSMFPGLSLVQWMSMQQNNPLSGSATPQLPSAL 440
Query: 69 SSTGLHSNFGTDDPSKLLNFQASALAAPNLQFSKANPQNQVNQLPQS 115
SS L +NF ++DPSKLLNFQ+ L++ N QF+K N N ++Q Q+
Sbjct: 441 SSFNLPNNFASNDPSKLLNFQSPNLSSANSQFNKPNTVNHISQQMQA 487
Score = 60 (26.2 bits), Expect = 5.5e-151, Sum P(3) = 5.5e-151
Identities = 24/57 (42%), Positives = 30/57 (52%)
Query: 225 NNGVL-VPN--ANQNVQQPTVYSQ--LQQPQLL-TSNTQAPQGILS-NNKNSYQLTS 274
NNG + V N + Q+ QPT +SQ LQQ +L T Q I S NK Q+TS
Sbjct: 532 NNGTIAVANQVSCQSPNQPTGFSQSQLQQQSMLPTGAKMTHQNINSMGNKGLSQMTS 588
Score = 45 (20.9 bits), Expect = 3.9e-28, Sum P(2) = 3.9e-28
Identities = 33/162 (20%), Positives = 58/162 (35%)
Query: 449 NFLNRNQQG-PAMLMGDSVVEPSSNLVQELHSKSDARIKHELPISKGPEHLK--YNG--- 502
N +++ Q PAM+ + Q H + + + +L +S+ + YN
Sbjct: 479 NHISQQMQAQPAMVKSQQQQQQQQQ--QHQHQQQQLQQQQQLQMSQQQVQQQGIYNNGTI 536
Query: 503 SMTDQVEASSSGTSYCLDPGNIQQNFSLPTYCLDGDTQSHPR-NSL---------PFVAN 552
++ +QV S +QQ LPT G +H NS+ F
Sbjct: 537 AVANQVSCQSPNQPTGFSQSQLQQQSMLPT----GAKMTHQNINSMGNKGLSQMTSFAQE 592
Query: 553 ID-----GMAPDTLLSRGYDSQKDLHNLLSNYGGTPRDIETE 589
+ M + L R Q LH+L N P+ ++ +
Sbjct: 593 MQFQQQLEMHNSSQLLRNQQEQSSLHSLQQNLSQNPQQLQMQ 634
Score = 40 (19.1 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 223 HVNNGVLVPNANQNVQQPTVYSQLQQPQLLTSNTQAPQGI---LSN---NKNSYQLTSLP 276
H N + P + V +YSQ L+ + P+ I LS+ + S+ + S+P
Sbjct: 867 HPRNNLAFPGNLEAVTSDPLYSQKDFQNLVPNYGNTPRDIETELSSAAISSQSFGIPSIP 926
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 367 (134.2 bits), Expect = 2.3e-31, P = 2.3e-31
Identities = 88/217 (40%), Positives = 130/217 (59%)
Query: 524 IQQN-FSLPTYCLDGDTQSHPRNSLPFVANIDGMAPDTLLSRGYDSQKDLHNLLSNYGGT 582
+QQ+ ++ C+ T S+ + P ++N + D + D Q L T
Sbjct: 673 MQQDLYASQNICMSNSTTSNILD--PPLSNT--VLDDFCAIKDTDFQNHPSGCLVGNNNT 728
Query: 583 P--RDIETELSTAAIS-SQSFAVPNIPFKPA----CSNEVGINEAGVLGNGL---WAN-Q 631
+D+++++++A+ + SQ+F+ + P S+ V ++ + N W
Sbjct: 729 SFAQDVQSQITSASFADSQAFSRQDFPDNSGGTGTSSSNVDFDDCSLRQNSKGSSWQKIA 788
Query: 632 TQRMRTFTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDH 691
T R+RT+TKVQK GSVGRSIDVT +K Y+EL+ + MFG+EG L PQSS WKLVYVD+
Sbjct: 789 TPRVRTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDY 848
Query: 692 ENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDG 728
E+D+LLVGDDPW+EFV CV+ I+ILS EVQQMS +G
Sbjct: 849 ESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEG 885
>TAIR|locus:2204237 [details] [associations]
symbol:ARF6 "auxin response factor 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0009908 "flower development"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009886 "post-embryonic morphogenesis" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010051 "xylem and phloem
pattern formation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC025295
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 HOGENOM:HOG000241141 EMBL:AF013467 EMBL:AY669788
EMBL:EU550049 EMBL:EU550050 EMBL:EU550051 EMBL:EU550052
EMBL:EU550053 EMBL:EU550054 EMBL:EU550055 EMBL:EU550056
EMBL:EU550057 EMBL:EU550058 EMBL:EU550059 EMBL:EU550060
EMBL:EU550061 EMBL:EU550062 EMBL:EU550063 EMBL:EU550064
EMBL:EU550065 EMBL:EU550066 EMBL:EU550067 EMBL:EU550068
EMBL:EU550069 EMBL:EU550070 EMBL:EU550071 EMBL:EU550072
IPI:IPI00533211 IPI:IPI00656643 PIR:F86427 RefSeq:NP_001031115.1
RefSeq:NP_174323.1 UniGene:At.21939 ProteinModelPortal:Q9ZTX8
SMR:Q9ZTX8 IntAct:Q9ZTX8 STRING:Q9ZTX8 PaxDb:Q9ZTX8 PRIDE:Q9ZTX8
EnsemblPlants:AT1G30330.2 GeneID:839913 KEGG:ath:AT1G30330
GeneFarm:3369 TAIR:At1g30330 eggNOG:NOG288258 InParanoid:Q9ZTX8
OMA:ANSHWRS PhylomeDB:Q9ZTX8 ProtClustDB:CLSN2686713
Genevestigator:Q9ZTX8 GermOnline:AT1G30330 Uniprot:Q9ZTX8
Length = 935
Score = 327 (120.2 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 69/134 (51%), Positives = 88/134 (65%)
Query: 617 INEAGVLGNGL-WANQTQRMRTFTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQ 675
I+E+G L + ++ + TF KV K GS GRS+D++++ Y ELR +LARMFG+EGQ
Sbjct: 776 IDESGFLQSSENLGSENPQSNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQ 835
Query: 676 LEDPQSSDWKLVYVDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDGD--LGNL 733
LEDP S W+LV+VD END+LL+GDDPW EFVS V IKILS EVQQM G L +
Sbjct: 836 LEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMGKRGLELLNSA 895
Query: 734 PVPNQACSGSDSGN 747
P N +GN
Sbjct: 896 PSSNNVDKLPSNGN 909
Score = 45 (20.9 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 19/58 (32%), Positives = 25/58 (43%)
Query: 31 MKDATSSIFPGLSLVQWM-SMQQNNQFPAAQSGFFPSMVSSTGLHSNFGTDDPSKLLN 87
M S+ P S +Q M S+ F G P T L SNF D+ S+LL+
Sbjct: 583 MSQFGSASQPNTSPLQSMTSLCHQQSFSDTNGGNNPISPLHT-LLSNFSQDESSQLLH 639
Score = 41 (19.5 bits), Expect = 3.4e-26, Sum P(2) = 3.4e-26
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 234 NQNVQQPTVYSQLQQPQLLTSNTQAPQGILSNNKNSY 270
+Q QQ Q QQ L T PQ + N++
Sbjct: 522 SQQQQQQLSQQQQQQAYLGVPETHQPQSQAQSQSNNH 558
>TAIR|locus:2152642 [details] [associations]
symbol:ARF8 "auxin response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009908
"flower development" evidence=IGI] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009886 "post-embryonic
morphogenesis" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009908 HOGENOM:HOG000241141
ProtClustDB:CLSN2686713 EMBL:AF042196 EMBL:AY669790 EMBL:AB024026
IPI:IPI00525703 IPI:IPI00846789 RefSeq:NP_001078672.1
RefSeq:NP_198518.1 UniGene:At.23446 ProteinModelPortal:Q9FGV1
SMR:Q9FGV1 IntAct:Q9FGV1 STRING:Q9FGV1 PaxDb:Q9FGV1 PRIDE:Q9FGV1
EnsemblPlants:AT5G37020.1 GeneID:833672 KEGG:ath:AT5G37020
GeneFarm:3372 TAIR:At5g37020 eggNOG:NOG292968 InParanoid:Q9FGV1
OMA:NDAYLPA PhylomeDB:Q9FGV1 Genevestigator:Q9FGV1
GermOnline:AT5G37020 Uniprot:Q9FGV1
Length = 811
Score = 296 (109.3 bits), Expect = 9.0e-24, Sum P(2) = 9.0e-24
Identities = 56/100 (56%), Positives = 72/100 (72%)
Query: 630 NQTQRMRTFTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYV 689
N + + + F KV K GSVGRS+D++R+ Y ELR +L +MF IEG LEDP S W+LV+V
Sbjct: 699 NSSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFV 758
Query: 690 DHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDGD 729
D ENDILL+GDDPW+ FV+ V IKILS +V QM G+
Sbjct: 759 DKENDILLLGDDPWESFVNNVWYIKILSPEDVHQMGDHGE 798
Score = 51 (23.0 bits), Expect = 9.0e-24, Sum P(2) = 9.0e-24
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 514 GTSYCLDPGNIQQNFSLPTYCLDGDTQSHPRNSLPFVANIDGMA---PDTLLSRGYDSQK 570
G S L+PGN QN SL + +D D+ +++P A+ G A P +L G+ Q
Sbjct: 624 GKSLALEPGN-PQNPSL--FGVDPDSGLFLPSTVPRFASSSGDAEASPMSLTDSGF--QN 678
Query: 571 DLHNLLSN 578
L++ + +
Sbjct: 679 SLYSCMQD 686
>TAIR|locus:2175098 [details] [associations]
symbol:ARF4 "auxin response factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] [GO:0010050 "vegetative
phase change" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB011483 GO:GO:0010050
HOGENOM:HOG000241141 GO:GO:0010158 EMBL:AF013466 EMBL:AF344313
EMBL:AY080832 EMBL:AY113977 IPI:IPI00525857 RefSeq:NP_200853.1
UniGene:At.6797 ProteinModelPortal:Q9ZTX9 SMR:Q9ZTX9 IntAct:Q9ZTX9
STRING:Q9ZTX9 PaxDb:Q9ZTX9 PRIDE:Q9ZTX9 EnsemblPlants:AT5G60450.1
GeneID:836166 KEGG:ath:AT5G60450 GeneFarm:3367 TAIR:At5g60450
eggNOG:NOG277773 InParanoid:Q9ZTX9 OMA:RILYTDS PhylomeDB:Q9ZTX9
ProtClustDB:CLSN2686689 Genevestigator:Q9ZTX9 GermOnline:AT5G60450
Uniprot:Q9ZTX9
Length = 788
Score = 232 (86.7 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 44/98 (44%), Positives = 66/98 (67%)
Query: 631 QTQRMRTFTKVQKRGS-VGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYV 689
Q+ R TKV K+GS VGR+ID++R GYD+L +L R+F +EG L DP+ W+++Y
Sbjct: 660 QSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEKG-WRILYT 718
Query: 690 DHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSLD 727
D END+++VGDDPW +F + V I + + EV+ + D
Sbjct: 719 DSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDD 756
>TAIR|locus:2174013 [details] [associations]
symbol:ARF2 "auxin response factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;TAS] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0010227 "floral organ abscission" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0048481 "ovule development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0009737 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0008285 GO:GO:0009734 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0010150 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009911 GO:GO:0010047
GO:GO:0010227 GO:GO:0048481 EMBL:AY669787 EMBL:AB016880
EMBL:AF336918 EMBL:AF378862 EMBL:BT000784 EMBL:BT001072
EMBL:AK221252 EMBL:AK221254 EMBL:AK221274 EMBL:AK221277
EMBL:AK221282 EMBL:AK221305 EMBL:U89771 EMBL:AJ441313 EMBL:AJ458328
IPI:IPI00518739 RefSeq:NP_201006.2 RefSeq:NP_851244.1
RefSeq:NP_974980.1 UniGene:At.21704 ProteinModelPortal:Q94JM3
SMR:Q94JM3 DIP:DIP-46014N IntAct:Q94JM3 STRING:Q94JM3 PaxDb:Q94JM3
PRIDE:Q94JM3 EnsemblPlants:AT5G62000.1 EnsemblPlants:AT5G62000.2
EnsemblPlants:AT5G62000.3 GeneID:836321 KEGG:ath:AT5G62000
GeneFarm:3364 TAIR:At5g62000 eggNOG:NOG255064 InParanoid:Q94JM3
OMA:HTESVEC PhylomeDB:Q94JM3 ProtClustDB:CLSN2680590
Genevestigator:Q94JM3 GermOnline:AT5G62000 Uniprot:Q94JM3
Length = 859
Score = 226 (84.6 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 43/96 (44%), Positives = 67/96 (69%)
Query: 631 QTQRMRTFTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYV 689
+T R+ TKV K+G ++GRS+D+++++ Y+EL +L R+F G+L P+ DW +VY
Sbjct: 728 KTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKK-DWLIVYT 786
Query: 690 DHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 725
D END++LVGDDPW EF V+ I I + EV++M+
Sbjct: 787 DEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMN 822
>TAIR|locus:2025991 [details] [associations]
symbol:ARF1 "auxin response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;IPI] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0010150 "leaf
senescence" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016246
"RNA interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 EMBL:AC007258 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:U83245 EMBL:AY133723 EMBL:BT002748
IPI:IPI00518211 IPI:IPI00520405 PIR:D96621 RefSeq:NP_001031208.1
RefSeq:NP_176184.1 RefSeq:NP_849830.1 UniGene:At.74832
ProteinModelPortal:Q8L7G0 SMR:Q8L7G0 IntAct:Q8L7G0 STRING:Q8L7G0
EnsemblPlants:AT1G59750.1 EnsemblPlants:AT1G59750.3 GeneID:842268
KEGG:ath:AT1G59750 GeneFarm:3363 TAIR:At1g59750 eggNOG:NOG257828
HOGENOM:HOG000241141 InParanoid:Q8L7G0 KO:K14486 OMA:QMPSFNL
PhylomeDB:Q8L7G0 ProtClustDB:CLSN2679699 Genevestigator:Q8L7G0
GermOnline:AT1G59750 Uniprot:Q8L7G0
Length = 665
Score = 214 (80.4 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 47/120 (39%), Positives = 79/120 (65%)
Query: 630 NQTQRMRTFTKVQKRGS-VGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVY 688
+Q++++R+ TKV +GS VGR+ID+TR + Y++L L MF I+G+L + + W++VY
Sbjct: 536 SQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLE-STKKWQVVY 594
Query: 689 VDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDGDLG-NLPVPNQACSGSDSGN 747
D E+D+++VGDDPW+EF V+ I I + EV+++S L N + +A ++GN
Sbjct: 595 TDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQLKA-DAEENGN 653
>TAIR|locus:2138096 [details] [associations]
symbol:ARF9 "auxin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000241141
EMBL:AF082176 EMBL:AC002343 EMBL:AL078468 EMBL:AL161560
EMBL:AF344312 EMBL:AK221865 EMBL:AK228263 IPI:IPI00519218
IPI:IPI00657180 PIR:T08917 RefSeq:NP_001031706.1 RefSeq:NP_194129.1
UniGene:At.3396 ProteinModelPortal:Q9XED8 SMR:Q9XED8 IntAct:Q9XED8
PaxDb:Q9XED8 PRIDE:Q9XED8 EnsemblPlants:AT4G23980.1 GeneID:828498
KEGG:ath:AT4G23980 GeneFarm:3373 TAIR:At4g23980 eggNOG:NOG300390
InParanoid:Q9XED8 OMA:YAQITLI PhylomeDB:Q9XED8
ProtClustDB:CLSN2685375 Genevestigator:Q9XED8 Uniprot:Q9XED8
Length = 638
Score = 213 (80.0 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 42/98 (42%), Positives = 66/98 (67%)
Query: 629 ANQTQRMRTFTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLV 687
+ Q+ R+ TKVQ +G VGR++D+ KGY+EL D+ ++F I+G+L + W++V
Sbjct: 516 SKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS--RNQWEIV 573
Query: 688 YVDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 725
+ D E D++LVGDDPW EF + V+ I I S EV++M+
Sbjct: 574 FTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMT 611
>TAIR|locus:2039124 [details] [associations]
symbol:ARF11 "auxin response factor 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC006526 EMBL:AC006418
HOGENOM:HOG000241141 EMBL:AY669791 EMBL:AK229757 EMBL:BX837073
EMBL:AK229924 IPI:IPI00544804 IPI:IPI00547357 IPI:IPI00656718
PIR:A84904 RefSeq:NP_001031548.1 RefSeq:NP_182176.2
RefSeq:NP_973701.1 UniGene:At.36497 ProteinModelPortal:Q9ZPY6
SMR:Q9ZPY6 PRIDE:Q9ZPY6 EnsemblPlants:AT2G46530.3 GeneID:819264
KEGG:ath:AT2G46530 GeneFarm:3388 TAIR:At2g46530 eggNOG:NOG303653
InParanoid:Q9ZPY6 OMA:MFEIEGE PhylomeDB:Q9ZPY6
ProtClustDB:CLSN2681223 ArrayExpress:Q9ZPY6 Genevestigator:Q9ZPY6
Uniprot:Q9ZPY6
Length = 622
Score = 207 (77.9 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 47/107 (43%), Positives = 67/107 (62%)
Query: 631 QTQRMRTFTKVQKRGS-VGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYV 689
Q R+ KVQ +G+ VGR++D+T + YDEL +L +MF IEG+L P+ W +V+
Sbjct: 506 QQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELS-PKDK-WAIVFT 563
Query: 690 DHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQM---SLDGDLGNL 733
D E D +LVGDDPW+EF + + I S EV++M SL GD G +
Sbjct: 564 DDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLLGDKGTI 610
Score = 47 (21.6 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 82 PSKLLNFQASALA-APNLQFSKANPQNQVNQLPQSPIA 118
P ++ F SAL P Q SK+ ++++ SP+A
Sbjct: 367 PWEIEPFSPSALTPTPTQQQSKSKRSRPISEITGSPVA 404
>TAIR|locus:2076765 [details] [associations]
symbol:ARF18 "auxin response factor 18" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL132959 HOGENOM:HOG000241141 EMBL:AF334717
EMBL:AY059746 EMBL:AY070463 EMBL:AY091392 EMBL:AK229945
IPI:IPI00524053 PIR:T47975 RefSeq:NP_567119.1 UniGene:At.17167
UniGene:At.69165 ProteinModelPortal:Q9C5W9 SMR:Q9C5W9 IntAct:Q9C5W9
EnsemblPlants:AT3G61830.1 GeneID:825356 KEGG:ath:AT3G61830
GeneFarm:3414 TAIR:At3g61830 eggNOG:NOG268528 InParanoid:Q9C5W9
OMA:RISQFIV PhylomeDB:Q9C5W9 ProtClustDB:CLSN2917487
Genevestigator:Q9C5W9 GermOnline:AT3G61830 Uniprot:Q9C5W9
Length = 602
Score = 207 (77.9 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 46/96 (47%), Positives = 62/96 (64%)
Query: 631 QTQRMRTFTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYV 689
QT R RT KVQ +G +VGR++D+T K YDEL +L MF I+GQL W +V+
Sbjct: 486 QTSRSRT--KVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFT 541
Query: 690 DHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 725
D E D++L GDDPW+EF + I I SS EV++M+
Sbjct: 542 DDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMT 577
>TAIR|locus:2014731 [details] [associations]
symbol:ARF14 "auxin response factor 14" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC007887 IPI:IPI00548517 PIR:G86476
RefSeq:NP_174786.1 UniGene:At.39556 ProteinModelPortal:Q9LQE8
SMR:Q9LQE8 IntAct:Q9LQE8 PRIDE:Q9LQE8 EnsemblPlants:AT1G35540.1
GeneID:840450 KEGG:ath:AT1G35540 GeneFarm:3394 TAIR:At1g35540
OMA:DITEDAM PhylomeDB:Q9LQE8 Genevestigator:Q9LQE8 Uniprot:Q9LQE8
Length = 605
Score = 204 (76.9 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 58/188 (30%), Positives = 98/188 (52%)
Query: 554 DGMAPDTLLSRGYDSQKDLHNLLSNYGGTPRDIETELSTAAISS-----QSFAVPNIPFK 608
D M P LL Y Q + L NY IE ++T A++S S A P++
Sbjct: 416 DAMTPSRLLM-SYPVQP-MAKL--NYNNVVTPIEENITTNAVASFRLFGVSLATPSVIKD 471
Query: 609 PA---------CSNEVGINEAGVLGNG--LWANQTQRMRTFTKVQKRG-SVGRSIDVTRY 656
P + E ++ +L + + + Q RT TKVQ +G ++GR++D++
Sbjct: 472 PVEQIGLEISRLTQEKKFGQSQILRSPTEIQSKQFSSTRTCTKVQMQGVTIGRAVDLSVL 531
Query: 657 KGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWDEFVSCVQSIKIL 716
GYD+L +L ++F ++GQL+ + W++ + ++E D +LVG+DPW EF + V+ I I
Sbjct: 532 NGYDQLILELEKLFDLKGQLQ--ARNQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFIY 589
Query: 717 SSAEVQQM 724
S EV+ +
Sbjct: 590 SKEEVKNL 597
Score = 41 (19.5 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 228 VLVPNANQNVQQPTVYSQLQQPQLLTSNTQAPQGILSNNKNSYQLTSLP 276
V++P NQN +P V S + +LT++ + G S K + + LP
Sbjct: 109 VVIPTQNQNQFRPLVNSFTK---VLTASDTSVHGGFSVPKK-HAIECLP 153
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 194 (73.4 bits), Expect = 5.4e-12, Sum P(3) = 5.4e-12
Identities = 40/105 (38%), Positives = 63/105 (60%)
Query: 629 ANQTQRMRTFTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLV 687
+ Q RT TKVQ +G ++GR++D++ GYD+L +L ++F I+GQL+ + WK+
Sbjct: 504 SKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT--RNQWKIA 561
Query: 688 YVDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDGDLGN 732
+ D + +LVGDDPW EF V+ I I S EV+ + L +
Sbjct: 562 FTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKNLKSSKSLSS 606
Score = 47 (21.6 bits), Expect = 5.4e-12, Sum P(3) = 5.4e-12
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 483 ARIKHELPISKGPEHLKYNGSMTDQVE---ASSSGTSYCL 519
+R+ P+ P+ L YN M Q+E + +GT++ L
Sbjct: 421 SRLLMSYPVQPMPK-LNYNNQMVTQIEENITTKAGTNFRL 459
Score = 37 (18.1 bits), Expect = 5.4e-12, Sum P(3) = 5.4e-12
Identities = 12/59 (20%), Positives = 27/59 (45%)
Query: 40 PGLSLVQWMSMQQNNQFPAAQSGFFPSMVSSTGLHSNFGTDDPSKL-LNFQASALAAPN 97
P SL++ +++ N+F ++ S P +++ P + L ++ + AA N
Sbjct: 361 PRSSLLKNKRLREVNEFGSSSSHLLPPILTQGQEIGQLSVASPMNISLRYRDTTEAAMN 419
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 192 (72.6 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 60/197 (30%), Positives = 96/197 (48%)
Query: 554 DGMAPDTLLSRGYDSQKDLHNLLSNYGGTP-RDIETELSTAAISS-----QSFAVPNI-- 605
D M P LL Y Q + L NY IE ++T A+++ S A+P +
Sbjct: 400 DAMNPSRLLM-SYPVQP-MPKL--NYNNQMVTQIEENITTKAVTNFRLFGVSLAIPLVIK 455
Query: 606 -PFKPACSNEVGINEAGVLGNG--------LWANQTQRMRTFTKVQKRG-SVGRSIDVTR 655
P + S+ + E G + + Q RT TKVQ +G ++GR++D++
Sbjct: 456 DPIEEIGSDISKLTEGKKFGQSQTLRSPIEIQSKQFGSTRTCTKVQMQGVTIGRAVDLSV 515
Query: 656 YKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWDEFVSCVQSIKI 715
GYD+L +L ++F ++GQL+ + WK+ + D + +LVGDDPW EF V+ I I
Sbjct: 516 LNGYDQLILELEKLFDLKGQLQT--RNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILI 573
Query: 716 LSSAEVQQMSLDGDLGN 732
S EV+ + L +
Sbjct: 574 YSKEEVKNLKSSKSLSS 590
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 183 (69.5 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 36/86 (41%), Positives = 57/86 (66%)
Query: 631 QTQRMRTFTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYV 689
Q RT TKVQ +G ++GR++D++ GYD+L +L ++F I+GQL+ + W++ +
Sbjct: 506 QFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT--RNQWEIAFT 563
Query: 690 DHENDILLVGDDPWDEFVSCVQSIKI 715
D + D +LVGDDPW EF + V+ I I
Sbjct: 564 DSDEDKMLVGDDPWPEFCNMVKKIFI 589
Score = 45 (20.9 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 228 VLVPNANQNVQQPTVYSQLQQPQLLTSNTQAPQGILSNNKNSYQ-LTSL 275
V++P N+N +P V S + L S+T A G K++ + L SL
Sbjct: 109 VVIPTQNENQFRPLVNSFTKV--LTASDTSAHGGFFVPKKHAIECLPSL 155
>TAIR|locus:2036288 [details] [associations]
symbol:ARF22 "auxin response factor 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 ProtClustDB:CLSN2681760
EMBL:AC023913 EMBL:AY669796 IPI:IPI00545778 PIR:C86468
RefSeq:NP_174699.2 UniGene:At.51186 ProteinModelPortal:Q9C8N7
SMR:Q9C8N7 IntAct:Q9C8N7 EnsemblPlants:AT1G34390.1 GeneID:840341
KEGG:ath:AT1G34390 GeneFarm:3426 TAIR:At1g34390 OMA:NITTNAN
PhylomeDB:Q9C8N7 Genevestigator:Q9C8N7 Uniprot:Q9C8N7
Length = 598
Score = 174 (66.3 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 34/88 (38%), Positives = 57/88 (64%)
Query: 629 ANQTQRMRTFTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLV 687
+ Q RT TKVQ +G ++ R++D++ GYD+L +L +F ++GQL+ + W++
Sbjct: 502 SKQFSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQT--RNQWEIA 559
Query: 688 YVDHENDILLVGDDPWDEFVSCVQSIKI 715
+ D ++D +LVGDDPW EF + V+ I I
Sbjct: 560 FTDSDDDKMLVGDDPWPEFCNMVKKILI 587
Score = 47 (21.6 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 483 ARIKHELPISKGPEHLKYNGSMTDQVE---ASSSGTSYCL 519
+R+ P+ P+ L YN M Q+E + +GT++ L
Sbjct: 419 SRLLMSYPVQPMPK-LNYNNQMVTQIEENITTKTGTNFRL 457
>TAIR|locus:2170862 [details] [associations]
symbol:ATAUX2-11 "AT5G43700" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=ISS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;ISS;RCA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007020
"microtubule nucleation" evidence=RCA] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] [GO:0003677 "DNA binding"
evidence=ISS] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009536 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB026651
HOGENOM:HOG000238261 ProtClustDB:CLSN2681778 UniGene:At.47260
EMBL:X53435 EMBL:L15450 EMBL:BT005853 IPI:IPI00523552 PIR:S12243
RefSeq:NP_199183.1 IntAct:P33077 STRING:P33077
EnsemblPlants:AT5G43700.1 GeneID:834390 KEGG:ath:AT5G43700
GeneFarm:3150 TAIR:At5g43700 eggNOG:NOG253406 InParanoid:P33077
OMA:KVYKSYP PhylomeDB:P33077 Genevestigator:P33077
GermOnline:AT5G43700 Uniprot:P33077
Length = 186
Score = 141 (54.7 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 35/104 (33%), Positives = 55/104 (52%)
Query: 630 NQTQRMRTFTKVQKRGSVG-RSIDVTRYKGYDELRHDLARMFGIE-GQL---EDPQSSDW 684
++++ + KV G+ R ID+T YK Y EL L MF G+ E + SD+
Sbjct: 82 SESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFEREGYKGSDF 141
Query: 685 KLVYVDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDG 728
Y D + D +LVGD PW+ FVS + ++I+ +EV+ + G
Sbjct: 142 VPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLGCGG 185
>UNIPROTKB|Q6K846 [details] [associations]
symbol:IAA9 "Auxin-responsive protein IAA9" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
ProtClustDB:CLSN2695987 EMBL:AC069158 EMBL:AP004240 EMBL:AK073365
RefSeq:NP_001048437.1 UniGene:Os.23256
EnsemblPlants:LOC_Os02g56120.1 EnsemblPlants:LOC_Os02g56120.2
GeneID:4331061 KEGG:dosa:Os02t0805100-01 KEGG:osa:4331061
Gramene:Q6K846 eggNOG:NOG253641 OMA:ARSRACG Uniprot:Q6K846
Length = 182
Score = 139 (54.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 34/88 (38%), Positives = 50/88 (56%)
Query: 638 FTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGI-EGQLEDPQSSDWK-------LVY 688
+ KV+K G ++GR +D+ + YDEL LARMF + Q E ++D + Y
Sbjct: 94 YVKVKKEGDAIGRKVDLALHSSYDELAATLARMFPTNDHQGEKKMANDDHGDAAGPVVTY 153
Query: 689 VDHENDILLVGDDPWDEFVSCVQSIKIL 716
D + D +LVGD PWD+F V+ +KIL
Sbjct: 154 EDGDGDWMLVGDVPWDDFARSVKRLKIL 181
>TAIR|locus:2180557 [details] [associations]
symbol:IAA28 "AT5G25890" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0010102 "lateral
root morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 EMBL:AF149413
GO:GO:0010102 EMBL:AC005405 HOGENOM:HOG000238261 KO:K14484
EMBL:AF149816 EMBL:BT000427 EMBL:BT002175 IPI:IPI00545995
PIR:T52143 RefSeq:NP_568478.1 UniGene:At.11439 IntAct:Q9XFM0
EnsemblPlants:AT5G25890.1 GeneID:832658 KEGG:ath:AT5G25890
GeneFarm:3188 TAIR:At5g25890 eggNOG:NOG283222 InParanoid:Q9XFM0
OMA:WEMFVST PhylomeDB:Q9XFM0 ProtClustDB:CLSN2917715
Genevestigator:Q9XFM0 GermOnline:AT5G25890 Uniprot:Q9XFM0
Length = 175
Score = 137 (53.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 37/151 (24%), Positives = 73/151 (48%)
Query: 577 SNYGGTPRDIETELSTAAISSQSFAV-PNIPFKPACSNEVGINEAGVLGNGLWANQTQRM 635
+N G+ + T+ T+ +S+ V P + + P S+ + A + +
Sbjct: 22 NNINGSKQKSSTK-ETSFLSNNRVEVAPVVGWPPVRSSRRNLT-AQLKEEMKKKESDEEK 79
Query: 636 RTFTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEND 694
+ K+ G +GR ++++ Y Y +L H + ++F + + + + LVY D E D
Sbjct: 80 ELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWD--LNRQYTLVYEDTEGD 137
Query: 695 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 725
+LVGD PW+ FVS V+ + +L ++ +S
Sbjct: 138 KVLVGDVPWEMFVSTVKRLHVLKTSHAFSLS 168
>TAIR|locus:2008991 [details] [associations]
symbol:ARF13 "AUXIN RESPONSE FACTOR 13" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GO:GO:0005634 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 IPI:IPI00938986 RefSeq:NP_001154393.1
UniGene:At.51184 ProteinModelPortal:F4HT52 SMR:F4HT52 PRIDE:F4HT52
EnsemblPlants:AT1G34170.3 GeneID:840316 KEGG:ath:AT1G34170
OMA:PEFCNMA ArrayExpress:F4HT52 Uniprot:F4HT52
Length = 546
Score = 159 (61.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 31/89 (34%), Positives = 55/89 (61%)
Query: 639 TKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILL 697
TKV +G ++ R++D+T GY++L L +F ++ +L + W++V+ ++E +L
Sbjct: 436 TKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRT--RNQWEIVFTNNEGAEML 493
Query: 698 VGDDPWDEFVSCVQSIKILSSAEVQQMSL 726
VGDDPW EF + + I I S E+++M L
Sbjct: 494 VGDDPWPEFCNMAKRIFICSKEEIKKMKL 522
>UNIPROTKB|Q7Y1H8 [details] [associations]
symbol:IAA14 "Auxin-responsive protein IAA14" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AC093713
EMBL:AK059619 KEGG:dosa:Os03t0797800-01 Gramene:Q7Y1H8
eggNOG:NOG284674 Uniprot:Q7Y1H8
Length = 195
Score = 137 (53.3 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 45/186 (24%), Positives = 75/186 (40%)
Query: 544 RNSLPFVANIDGMAPDTLLSRGYDSQKDLHNLLSNYGGTPRDIETELSTAAISSQSFAVP 603
R LP DG+A S + + G RD+E S A+ Q P
Sbjct: 11 RLGLPGSGGGDGVAAKKRRSASSTVKSEASGTACCGGAGARDVEDGASPAS-KVQVVGWP 69
Query: 604 NIPFKPACSNEVGINEAGVLGNGLWANQTQRMRT------FTKVQKRGSVG-RSIDVTRY 656
+ + + + G +T + R + KV G+ R +D+ Y
Sbjct: 70 PVGSYRRSTFQSSSSSTAAAAKGKGGGETDQGRKNKGGGLYVKVSMDGAPYLRKVDLRMY 129
Query: 657 KGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWDEFVSCVQSIKIL 716
GY ELR L +FG ++ + + Y D + D++L GD PWD F+S + ++I+
Sbjct: 130 GGYRELRDALDALFGCFSADASASAAHFAVAYEDKDGDLMLAGDVPWDMFISSCKKLRIM 189
Query: 717 SSAEVQ 722
+E +
Sbjct: 190 RGSEAR 195
>TAIR|locus:2129910 [details] [associations]
symbol:IAA1 "indole-3-acetic acid inducible" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] [GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 EMBL:Z97336
EMBL:AL161539 HOGENOM:HOG000238261 EMBL:L15448 EMBL:AY133714
IPI:IPI00539077 PIR:A71408 RefSeq:NP_193192.1 UniGene:At.43941
IntAct:P49677 STRING:P49677 DNASU:827103 EnsemblPlants:AT4G14560.1
GeneID:827103 KEGG:ath:AT4G14560 GeneFarm:3140 TAIR:At4g14560
eggNOG:NOG329801 InParanoid:P49677 OMA:CQKLRIM PhylomeDB:P49677
ProtClustDB:CLSN2681778 Genevestigator:P49677 GermOnline:AT4G14560
Uniprot:P49677
Length = 168
Score = 126 (49.4 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 33/96 (34%), Positives = 47/96 (48%)
Query: 630 NQTQRMRTFTKVQKRGSVG-RSIDVTRYKGYDELRHDLARMF----GIEGQLEDPQSSDW 684
N + ++ KV G+ R ID+ YK Y EL L MF G + E + S +
Sbjct: 68 NNNNKNVSYVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKFTVGEYSEREGYKGSGF 127
Query: 685 KLVYVDHENDILLVGDDPWDEFVSCVQSIKILSSAE 720
Y D + D +LVGD PWD F S Q ++I+ +E
Sbjct: 128 VPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSE 163
>TAIR|locus:2090527 [details] [associations]
symbol:IAA31 "indole-3-acetic acid inducible 31"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0009630 GO:GO:0022621 EMBL:AB022219 HOGENOM:HOG000005696
EMBL:AY054274 EMBL:BT000543 IPI:IPI00540266 RefSeq:NP_188387.1
UniGene:At.22356 IntAct:Q8H174 EnsemblPlants:AT3G17600.1
GeneID:821026 KEGG:ath:AT3G17600 GeneFarm:3238 TAIR:At3g17600
eggNOG:NOG267119 InParanoid:Q8H174 OMA:KITRPER PhylomeDB:Q8H174
ProtClustDB:CLSN2913488 Genevestigator:Q8H174 GermOnline:AT3G17600
Uniprot:Q8H174
Length = 158
Score = 125 (49.1 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 638 FTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDIL 696
F KV G +GR +D+ + GY+ L +L+ MF + L Y D + D +
Sbjct: 74 FVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWM 133
Query: 697 LVGDDPWDEFVSCVQSIKI 715
+VGD PWD F+ V+ +KI
Sbjct: 134 MVGDIPWDMFLETVRRLKI 152
>UNIPROTKB|Q75GK1 [details] [associations]
symbol:IAA12 "Auxin-responsive protein IAA12" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC145379 EMBL:AK073044 RefSeq:NP_001050714.1 UniGene:Os.9945
STRING:Q75GK1 EnsemblPlants:LOC_Os03g43410.1 GeneID:4333512
KEGG:dosa:Os03t0633800-01 KEGG:osa:4333512 Gramene:Q75GK1
eggNOG:NOG272839 OMA:TCKKLRI ProtClustDB:CLSN2694101 Uniprot:Q75GK1
Length = 226
Score = 136 (52.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 649 RSIDVTRYKGYDELRHDLARMFG-IEGQLEDPQSSDWKLVYVDHENDILLVGDDPWDEFV 707
R ID+ YKGY ELR L MF G + S++ + Y D + D++LVGD P+D F
Sbjct: 142 RKIDLRMYKGYRELREALEAMFVCFSGAADGANPSEFAITYQDKDGDLMLVGDVPFDMFT 201
Query: 708 SCVQSIKILSSAE 720
S + ++I+ +E
Sbjct: 202 STCKKLRIMKRSE 214
>TAIR|locus:2197838 [details] [associations]
symbol:IAA12 "indole-3-acetic acid inducible 12"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009733 "response to auxin
stimulus" evidence=IGI] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010051 "xylem and phloem
pattern formation" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0048364 "root
development" evidence=IMP] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0010051 EMBL:AC002376 GO:GO:0009880 HOGENOM:HOG000238261
EMBL:U18414 EMBL:AF332398 EMBL:AY065240 EMBL:AY096535 EMBL:AY088042
IPI:IPI00527949 PIR:S58498 RefSeq:NP_171949.1 UniGene:At.10466
UniGene:At.10797 IntAct:Q38830 STRING:Q38830 PRIDE:Q38830
DNASU:839495 EnsemblPlants:AT1G04550.2 GeneID:839495
KEGG:ath:AT1G04550 GeneFarm:3159 TAIR:At1g04550 eggNOG:NOG330636
InParanoid:Q38830 KO:K14484 OMA:WKERGRI PhylomeDB:Q38830
ProtClustDB:CLSN2681806 Genevestigator:Q38830 Uniprot:Q38830
Length = 239
Score = 130 (50.8 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 33/99 (33%), Positives = 52/99 (52%)
Query: 638 FTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMF-GIEG----QLEDPQ-----SSDWKL 686
F KV G +GR +D+ + Y+ L L MF G+ G + P SSD+ L
Sbjct: 126 FVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVL 185
Query: 687 VYVDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 725
Y D E D +LVGD PW F++ V+ ++I+ ++E ++
Sbjct: 186 TYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLA 224
>UNIPROTKB|P49679 [details] [associations]
symbol:IAA4/5 "Auxin-induced protein IAA4" species:3888
"Pisum sativum" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:X68215
EMBL:X68216 PIR:S39075 IntAct:P49679 Uniprot:P49679
Length = 189
Score = 125 (49.1 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 32/90 (35%), Positives = 46/90 (51%)
Query: 638 FTKVQKRGSVG-RSIDVTRYKGYDELRHDLARMF----GIEGQLEDPQSSDWKLVYVDHE 692
F KV G+ R ID+ Y GY EL L MF G + E + S++ Y D +
Sbjct: 94 FVKVSMDGAPYLRKIDLRVYGGYSELLKALETMFKLTIGEYSEREGYKGSEYAPTYEDKD 153
Query: 693 NDILLVGDDPWDEFVSCVQSIKILSSAEVQ 722
D +LVGD PWD FV+ + ++I+ E +
Sbjct: 154 GDWMLVGDVPWDMFVTSCKRLRIMKGTEAK 183
>UNIPROTKB|Q652A1 [details] [associations]
symbol:IAA26 "Auxin-responsive protein IAA26" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AP005681 EMBL:AK111128 RefSeq:NP_001063732.1 UniGene:Os.57199
EnsemblPlants:LOC_Os09g35870.1 GeneID:4347643
KEGG:dosa:Os09t0527700-01 KEGG:osa:4347643 Gramene:Q652A1
eggNOG:NOG296772 OMA:WEHAVVY ProtClustDB:CLSN2697868 Uniprot:Q652A1
Length = 140
Score = 113 (44.8 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 638 FTKVQKRGSVG-RSIDVTRYKGYDELRHDLARMFGIE--GQLEDPQSSDWKLVYVDHEND 694
F KV G+ R +DV Y Y EL L MF G ++ + +VY D + D
Sbjct: 47 FVKVSMDGTPYLRKVDVAAYGDYLELVEALNDMFYCSTIGLMDGYGEWEHAVVYEDGDGD 106
Query: 695 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 725
+LVGD PW+ FVS + ++++ + E + +S
Sbjct: 107 WMLVGDVPWEMFVSSCKRMRVMRACEARGLS 137
>TAIR|locus:2051154 [details] [associations]
symbol:IAA13 "auxin-induced protein 13" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC002332 HOGENOM:HOG000238261
UniGene:At.10797 ProtClustDB:CLSN2681806 EMBL:U18415 EMBL:AF332399
EMBL:BT005874 EMBL:AY085194 EMBL:Z26543 IPI:IPI00536192
IPI:IPI00548760 PIR:S58499 RefSeq:NP_001118434.1 RefSeq:NP_180889.1
RefSeq:NP_850205.1 UniGene:At.74387 IntAct:Q38831 STRING:Q38831
EnsemblPlants:AT2G33310.2 GeneID:817894 KEGG:ath:AT2G33310
GeneFarm:3160 TAIR:At2g33310 eggNOG:NOG308656 InParanoid:Q38831
OMA:LEDMFFR PhylomeDB:Q38831 Genevestigator:Q38831
GermOnline:AT2G33310 Uniprot:Q38831
Length = 247
Score = 126 (49.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 31/102 (30%), Positives = 52/102 (50%)
Query: 638 FTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMF--------GIEGQLEDPQ-----SSD 683
F KV G ++GR +D+ + Y+ L L MF G+ Q P SS+
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190
Query: 684 WKLVYVDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 725
+ L Y D E D +LVGD PW F++ V+ ++++ ++E ++
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 232
>TAIR|locus:2098023 [details] [associations]
symbol:IAA30 "indole-3-acetic acid inducible 30"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;RCA;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0010583
"response to cyclopentenone" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 GO:GO:0048364 GO:GO:0009630
GO:GO:0010262 EMBL:AL138651 PIR:T48002 HOGENOM:HOG000005696
ProtClustDB:CLSN2683572 EMBL:AY669801 IPI:IPI00529772
RefSeq:NP_191769.1 UniGene:At.50305 IntAct:Q9M1R4 STRING:Q9M1R4
EnsemblPlants:AT3G62100.1 GeneID:825383 KEGG:ath:AT3G62100
GeneFarm:3237 TAIR:At3g62100 eggNOG:NOG324376 InParanoid:Q9M1R4
OMA:EMMIMEE PhylomeDB:Q9M1R4 Genevestigator:Q9M1R4
GermOnline:AT3G62100 Uniprot:Q9M1R4
Length = 172
Score = 118 (46.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 31/83 (37%), Positives = 42/83 (50%)
Query: 638 FTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIE---GQLEDPQSS-DWKLVYVDHE 692
+ KV G +GR ID+ GY +L L MF + ED S L Y D E
Sbjct: 84 YVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEKSHVLTYADKE 143
Query: 693 NDILLVGDDPWDEFVSCVQSIKI 715
D ++VGD PW+ F+S V+ +KI
Sbjct: 144 GDWMMVGDVPWEMFLSSVRRLKI 166
>TAIR|locus:2041324 [details] [associations]
symbol:IAA20 "indole-3-acetic acid inducible 20"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0009647 "skotomorphogenesis" evidence=IMP]
[GO:0010588 "cotyledon vascular tissue pattern formation"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
EMBL:AC004411 GO:GO:0009630 GO:GO:0009647 GO:GO:0010588
EMBL:AK117233 EMBL:AF348576 EMBL:U49076 IPI:IPI00547197 PIR:T02188
RefSeq:NP_182222.1 UniGene:At.10480 IntAct:O24410 STRING:O24410
DNASU:819313 EnsemblPlants:AT2G46990.1 GeneID:819313
KEGG:ath:AT2G46990 GeneFarm:3236 TAIR:At2g46990 eggNOG:NOG254610
HOGENOM:HOG000005696 InParanoid:O24410 OMA:KISRANY PhylomeDB:O24410
ProtClustDB:CLSN2683572 Genevestigator:O24410 GermOnline:AT2G46990
Uniprot:O24410
Length = 175
Score = 117 (46.2 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 30/83 (36%), Positives = 41/83 (49%)
Query: 638 FTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIE---GQLEDP-QSSDWKLVYVDHE 692
+ KV G +GR ID+ GY +L L MF + ED L Y D E
Sbjct: 86 YVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKE 145
Query: 693 NDILLVGDDPWDEFVSCVQSIKI 715
D ++VGD PW+ F+S V+ +KI
Sbjct: 146 GDWMMVGDVPWEMFLSTVRRLKI 168
>TAIR|locus:2196573 [details] [associations]
symbol:IAA5 "indole-3-acetic acid inducible 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;RCA;TAS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC013453 HOGENOM:HOG000238261
EMBL:X53436 EMBL:AY150496 EMBL:U18407 IPI:IPI00531814 PIR:G86289
PIR:S12244 PIR:S58492 RefSeq:NP_173011.1 UniGene:At.28674
IntAct:P33078 STRING:P33078 EnsemblPlants:AT1G15580.1 GeneID:838128
KEGG:ath:AT1G15580 GeneFarm:3151 TAIR:At1g15580 eggNOG:NOG305053
OMA:ESECVPI PhylomeDB:P33078 ProtClustDB:CLSN2912676
Genevestigator:P33078 GermOnline:AT1G15580 Uniprot:P33078
Length = 163
Score = 114 (45.2 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 38/141 (26%), Positives = 64/141 (45%)
Query: 581 GTPRDIETELSTAAISSQSFAVPNIPFKPACSNEVGINEAG--VLGNGLWANQTQRMRT- 637
G P DI +S +IS + A P + C G + + N +R ++
Sbjct: 18 GLPGDIV--VSGESISGKKRASPEVEIDLKCEPAKKSQVVGWPPVCSYRRKNSLERTKSS 75
Query: 638 FTKVQKRGSVG-RSIDVTRYKGYDELRHDLARMFGIEGQLEDP-QSSDWKLVYVDHENDI 695
+ KV G+ R ID+ YK Y +L L +FG +D + S+ +Y D + D
Sbjct: 76 YVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYINFDDTLKESECVPIYEDKDGDW 135
Query: 696 LLVGDDPWDEFVSCVQSIKIL 716
+L GD PW+ F+ + ++I+
Sbjct: 136 MLAGDVPWEMFLGSCKRLRIM 156
>TAIR|locus:2094578 [details] [associations]
symbol:IAA2 "indole-3-acetic acid inducible 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003700
GO:GO:0006351 EMBL:AB026655 HOGENOM:HOG000238261
ProtClustDB:CLSN2681778 EMBL:L15449 EMBL:AF027157 EMBL:AF332392
IPI:IPI00527263 RefSeq:NP_188943.1 UniGene:At.23539 IntAct:P49678
STRING:P49678 EnsemblPlants:AT3G23030.1 GeneID:821877
KEGG:ath:AT3G23030 GeneFarm:3142 TAIR:At3g23030 eggNOG:NOG239673
InParanoid:P49678 OMA:CEREGYK PhylomeDB:P49678
Genevestigator:P49678 GermOnline:AT3G23030 Uniprot:P49678
Length = 174
Score = 116 (45.9 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 33/99 (33%), Positives = 50/99 (50%)
Query: 637 TFTKVQKRGSVG-RSIDVTRYKGYDELRHDLARMFGIE-GQL---EDPQSSDWKLVYVDH 691
++ KV G+ R ID+ YK Y EL L MF + G+ E + S + Y D
Sbjct: 78 SYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMIGEYCEREGYKGSGFVPTYEDK 137
Query: 692 ENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDGDL 730
+ D +LVGD PWD F S + ++I+ ++ +LD L
Sbjct: 138 DGDWMLVGDVPWDMFSSSCKRLRIMKGSDAP--ALDSSL 174
>TAIR|locus:2018379 [details] [associations]
symbol:SHY2 "SHORT HYPOCOTYL 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
[GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351
EMBL:AC000104 HOGENOM:HOG000238261 KO:K14484
ProtClustDB:CLSN2681778 EMBL:U18406 EMBL:AF332393 EMBL:AY064007
IPI:IPI00519738 PIR:S58491 RefSeq:NP_171920.1 UniGene:At.20801
DIP:DIP-31741N IntAct:Q38822 STRING:Q38822 ProMEX:Q38822
DNASU:839570 EnsemblPlants:AT1G04240.1 GeneID:839570
KEGG:ath:AT1G04240 GeneFarm:3143 TAIR:At1g04240 eggNOG:NOG275456
InParanoid:Q38822 OMA:KNESEHE PhylomeDB:Q38822
Genevestigator:Q38822 GermOnline:AT1G04240 Uniprot:Q38822
Length = 189
Score = 118 (46.6 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 29/90 (32%), Positives = 48/90 (53%)
Query: 638 FTKVQKRGSVG-RSIDVTRYKGYDELRHDLARMFGIE-GQL---EDPQSSDWKLVYVDHE 692
+ KV G+ R ID++ YKGY EL L MF G+ + + SD+ Y D +
Sbjct: 94 YVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKD 153
Query: 693 NDILLVGDDPWDEFVSCVQSIKILSSAEVQ 722
D +L+GD PW+ F+ + ++I+ +E +
Sbjct: 154 GDWMLIGDVPWEMFICTCKRLRIMKGSEAK 183
>UNIPROTKB|Q75GB1 [details] [associations]
symbol:IAA17 "Auxin-responsive protein IAA17" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC145396 EMBL:AC145477 EMBL:AK106192
EnsemblPlants:LOC_Os05g14180.1 KEGG:dosa:Os05t0230700-01
Gramene:Q75GB1 eggNOG:NOG266390 OMA:CKKLKIM Uniprot:Q75GB1
Length = 257
Score = 122 (48.0 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 606 PFKPACSNEVGINEAGVLGNGLWANQTQRMRTFTKVQKRGSVG-RSIDVTRYKGYDELRH 664
P + N + N+ A Q Q + KV G+ R +D+ YK Y +L
Sbjct: 122 PIRSYRKNTMATNQLKSSKEDAEAKQGQGF-LYVKVSMDGAPYLRKVDLKTYKNYKDLST 180
Query: 665 DLARMF-----GIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWDEFVSCVQSIKILSSA 719
L +MF G +G E + ++ L Y D + D +LVGD PW+ F + + ++I+ +
Sbjct: 181 ALEKMFIGFTTGKDGLSESRKDGEYVLTYEDKDGDWMLVGDVPWEMFANSCRRLRIMKGS 240
Query: 720 E 720
+
Sbjct: 241 D 241
>UNIPROTKB|Q6ZL57 [details] [associations]
symbol:IAA24 "Auxin-responsive protein IAA24" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AP003835
EMBL:AK103483 RefSeq:NP_001059051.1 UniGene:Os.8622
EnsemblPlants:LOC_Os07g08460.1 GeneID:4342573
KEGG:dosa:Os07t0182400-01 KEGG:osa:4342573 Gramene:Q6ZL57
eggNOG:NOG284204 OMA:QHAIAYE ProtClustDB:CLSN2694400 Uniprot:Q6ZL57
Length = 219
Score = 120 (47.3 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 47/189 (24%), Positives = 79/189 (41%)
Query: 543 PRNSLPFVANIDGMAPDTLLSRGYD-SQKDLHNLLSNYGGTPRDIETELSTAA-ISSQSF 600
P +S+ G P S G S + ++ S G + E + TAA +Q
Sbjct: 31 PGSSITTTTTTGGADPAAKRSLGAKRSLESTDSMASGTGTSAAGDEHDDDTAAPAKAQVV 90
Query: 601 AVPNI-PFKPACSNEVGINEAGVL--GNGLWANQTQRMRTFTKVQKRGSVG-RSIDVTRY 656
P + ++ ++ A G+ Q Q + KV G+ R +D+
Sbjct: 91 GWPPVRAYRRNTFHQAAAAAAATKKGGDEKQKQQQQGGGLYVKVSMDGAPYLRKVDLKMC 150
Query: 657 KGYDELRHDLARMFG--IEGQLEDPQSS-DWKLVYVDHENDILLVGDDPWDEFVSCVQSI 713
KGY ELR L +F D S + + Y D + D++LVGD PW+ F+S + +
Sbjct: 151 KGYRELREALDLLFTKCFSATASDGCSDGQFAIAYEDKDGDLMLVGDVPWEMFISSCKKL 210
Query: 714 KILSSAEVQ 722
+I+ +E +
Sbjct: 211 RIMKGSEAR 219
>TAIR|locus:2090141 [details] [associations]
symbol:IAA19 "indole-3-acetic acid inducible 19"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009630 "gravitropism"
evidence=NAS] [GO:0009638 "phototropism" evidence=NAS] [GO:0009733
"response to auxin stimulus" evidence=RCA;NAS;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080086 "stamen filament development" evidence=IMP] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AB022218 EMBL:AC024081
HOGENOM:HOG000238261 KO:K14484 EMBL:AY088753 EMBL:U49075
IPI:IPI00522744 RefSeq:NP_188173.1 UniGene:At.10479 IntAct:O24409
STRING:O24409 EnsemblPlants:AT3G15540.1 GeneID:820793
KEGG:ath:AT3G15540 GeneFarm:3183 TAIR:At3g15540 eggNOG:NOG325225
InParanoid:O24409 OMA:NCEYVTI PhylomeDB:O24409
ProtClustDB:CLSN2679755 Genevestigator:O24409 GermOnline:AT3G15540
GO:GO:0080086 Uniprot:O24409
Length = 197
Score = 116 (45.9 bits), Expect = 0.00016, P = 0.00016
Identities = 23/81 (28%), Positives = 43/81 (53%)
Query: 649 RSIDVTRYKGYDELRHDLARMFGIEG---QLEDPQSSDWKLVYVDHENDILLVGDDPWDE 705
R +D+ +GYD+L L ++FG G L+D + ++ +Y D + D +L GD PW
Sbjct: 110 RKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAGDVPWGM 169
Query: 706 FVSCVQSIKILSSAEVQQMSL 726
F+ + ++I+ ++ L
Sbjct: 170 FLESCKRLRIMKRSDATGFGL 190
>TAIR|locus:2018374 [details] [associations]
symbol:AXR3 "AT1G04250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0009734 "auxin mediated signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009733 "response to auxin stimulus" evidence=IEP;IMP;TAS]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351
GO:GO:0009416 EMBL:AC000104 HOGENOM:HOG000238261 KO:K14484
EMBL:U49073 EMBL:AF040631 EMBL:AF040632 EMBL:AF336916 EMBL:AY070094
EMBL:AY117183 EMBL:AY087284 IPI:IPI00548274 PIR:H86173
RefSeq:NP_171921.1 UniGene:At.20252 IntAct:P93830 STRING:P93830
DNASU:839568 EnsemblPlants:AT1G04250.1 GeneID:839568
KEGG:ath:AT1G04250 GeneFarm:3180 TAIR:At1g04250 eggNOG:NOG250798
InParanoid:P93830 OMA:KEGSTTH PhylomeDB:P93830
ProtClustDB:CLSN2914376 Genevestigator:P93830 GermOnline:AT1G04250
Uniprot:P93830
Length = 229
Score = 86 (35.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 37/124 (29%), Positives = 50/124 (40%)
Query: 554 DGMAPDTLLSRGYDSQKDLHNLLSNYGGTPRDIETELSTAAISSQSFAVPNIPFKP-ACS 612
D +AP T RG+ DL L+N T S + A P P KP A +
Sbjct: 22 DTVAPVTGNKRGFSETVDLKLNLNNEPANKEGSTTHDVVTFDSKEKSACPKDPAKPPAKA 81
Query: 613 NEVG-----INEAGVLGNGLWANQTQRMRTFTKVQKRGSVG-RSIDVTRYKGYDELRHDL 666
VG V+ + ++ F KV G+ R ID+ YK YDEL + L
Sbjct: 82 QVVGWPPVRSYRKNVMVSCQKSSGGPEAAAFVKVSMDGAPYLRKIDLRMYKSYDELSNAL 141
Query: 667 ARMF 670
+ MF
Sbjct: 142 SNMF 145
Score = 73 (30.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 673 EGQLEDPQSSDWKLV--YVDHENDILLVGDDPWDEFVSCVQSIKILSSAE 720
E +L D +S W V Y D + D +LVGD PW FV + ++++ ++
Sbjct: 165 ERKLMDLVNS-WDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSD 213
>UNIPROTKB|Q9LG86 [details] [associations]
symbol:IAA2 "Auxin-responsive protein IAA2" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AP002743
EMBL:AK100314 RefSeq:NP_001042263.1 UniGene:Os.19952 GeneID:4326775
KEGG:dosa:Os01t0190300-01 KEGG:osa:4326775 Gramene:Q9LG86
eggNOG:NOG325733 OMA:KRIEHAP ProtClustDB:CLSN2691155 Uniprot:Q9LG86
Length = 238
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 30/105 (28%), Positives = 55/105 (52%)
Query: 638 FTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMF-GI--------EGQLEDPQSSD---- 683
F K+ G +GR +D+ Y GY +L + ++F G+ +G+ + + +
Sbjct: 120 FVKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGEADAAAAGEMVGG 179
Query: 684 --WKLVYVDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSL 726
+ LVY D E D +LVGD PW F++ + +++L S+++ SL
Sbjct: 180 GEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSDLPPPSL 224
>UNIPROTKB|Q5NB25 [details] [associations]
symbol:IAA3 "Auxin-responsive protein IAA3" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
eggNOG:NOG266390 EMBL:AP001550 EMBL:AP001859 EMBL:AK104654
RefSeq:NP_001042495.1 UniGene:Os.12733
EnsemblPlants:LOC_Os01g13030.1 EnsemblPlants:LOC_Os01g13030.2
GeneID:4325890 KEGG:dosa:Os01t0231000-01 KEGG:osa:4325890
Gramene:Q5NB25 OMA:CHIVFRS Uniprot:Q5NB25
Length = 263
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 33/121 (27%), Positives = 57/121 (47%)
Query: 606 PFKPACSNEVGINEAGVLGNGLWANQTQRMRTFTKVQKRGSVG-RSIDVTRYKGYDELRH 664
P + N + N+ + A Q Q + KV G+ R +D+ YK Y ++
Sbjct: 129 PIRSYRKNTMATNQIKSNKEDVDAKQGQGF-LYVKVSMDGAPYLRKVDLKTYKNYKDMSL 187
Query: 665 DLARMF-----GIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWDEFVSCVQSIKILSSA 719
L +MF G EG E+ + ++ L Y D + D +LVGD PW+ F + ++I+ +
Sbjct: 188 GLEKMFIGFSTGKEGA-ENQKDGEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGS 246
Query: 720 E 720
+
Sbjct: 247 D 247
>TAIR|locus:2088324 [details] [associations]
symbol:PAP1 "phytochrome-associated protein 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0006995 "cellular response to
nitrogen starvation" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AP000373 HOGENOM:HOG000238261
UniGene:At.16067 ProtClustDB:CLSN2679451 EMBL:AF088281
EMBL:AF332394 EMBL:AF332401 EMBL:AF386948 EMBL:AY072502
EMBL:AY087745 IPI:IPI00539954 RefSeq:NP_188271.1 UniGene:At.20072
UniGene:At.47260 IntAct:Q8LAL2 EnsemblPlants:AT3G16500.1
GeneID:820898 KEGG:ath:AT3G16500 GeneFarm:3185 TAIR:At3g16500
eggNOG:NOG303951 InParanoid:Q8LAL2 OMA:DEEDHSA PhylomeDB:Q8LAL2
Genevestigator:Q8LAL2 GermOnline:AT3G16500 Uniprot:Q8LAL2
Length = 269
Score = 118 (46.6 bits), Expect = 0.00027, P = 0.00027
Identities = 28/91 (30%), Positives = 50/91 (54%)
Query: 647 VGRSIDVTRYKGYDELRHDLARMF-GI--------EGQLEDPQ-------SSDWKLVYVD 690
+GR +D+ Y Y++L + ++F G+ +GQ E+ ++ L Y D
Sbjct: 163 IGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGKGEFTLTYED 222
Query: 691 HENDILLVGDDPWDEFVSCVQSIKILSSAEV 721
+E D +LVGD PW FVS V+ ++++ S+E+
Sbjct: 223 NEGDKMLVGDVPWQMFVSSVKRLRVIKSSEI 253
>TAIR|locus:2196184 [details] [associations]
symbol:IAA34 "indole-3-acetic acid inducible 34"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC012189 EMBL:AJ458327
EMBL:AF334713 IPI:IPI00539053 PIR:B86284 RefSeq:NP_172959.2
UniGene:At.17166 IntAct:Q9C5X0 DNASU:838070
EnsemblPlants:AT1G15050.1 GeneID:838070 KEGG:ath:AT1G15050
GeneFarm:3196 TAIR:At1g15050 eggNOG:NOG305135 HOGENOM:HOG000090886
OMA:RITRRND PhylomeDB:Q9C5X0 ProtClustDB:CLSN2915091
ArrayExpress:Q9C5X0 Genevestigator:Q9C5X0 GermOnline:AT1G15050
Uniprot:Q9C5X0
Length = 185
Score = 110 (43.8 bits), Expect = 0.00063, P = 0.00063
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 624 GNGLWANQTQRMRT-FTKVQKRGSV-GRSIDVTRYKGYDELRHDLARMFGIE---GQLED 678
G +N+ R + + KV G V GR + V + Y L H L MFG++ G
Sbjct: 79 GQRYCSNEGYRRKWGYVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQSVSGLRLF 138
Query: 679 PQSSDWKLVYVDHENDILLVGDDPWDEFVSCVQSIKI 715
S++ LVY D E GD PW+EF+ V+ ++I
Sbjct: 139 QMESEFCLVYRDEEGLWRNAGDVPWNEFIESVERLRI 175
>TAIR|locus:2195820 [details] [associations]
symbol:IAA18 "indole-3-acetic acid inducible 18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000238261
KO:K14484 EMBL:AC015448 EMBL:AF367263 EMBL:AY056062 EMBL:AY088406
EMBL:U49074 IPI:IPI00534235 PIR:H96558 RefSeq:NP_175607.1
UniGene:At.16067 IntAct:O24408 STRING:O24408
EnsemblPlants:AT1G51950.1 GeneID:841623 KEGG:ath:AT1G51950
GeneFarm:3181 TAIR:At1g51950 eggNOG:NOG285609 InParanoid:O24408
OMA:MIPQERR PhylomeDB:O24408 ProtClustDB:CLSN2679451
Genevestigator:O24408 GermOnline:AT1G51950 Uniprot:O24408
Length = 267
Score = 113 (44.8 bits), Expect = 0.00097, P = 0.00096
Identities = 25/91 (27%), Positives = 51/91 (56%)
Query: 647 VGRSIDVTRYKGYDELRHDLARMF-GI-------EGQLEDPQ--------SSDWKLVYVD 690
+GR +D++ + Y++L + ++F G+ +ED + + ++ L Y D
Sbjct: 161 IGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITGLLDGNGEYTLTYED 220
Query: 691 HENDILLVGDDPWDEFVSCVQSIKILSSAEV 721
+E D +LVGD PW FVS V+ ++++ ++E+
Sbjct: 221 NEGDKMLVGDVPWQMFVSSVKRLRVIKTSEI 251
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.129 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 762 518 0.00089 119 3 11 23 0.46 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 41
No. of states in DFA: 619 (66 KB)
Total size of DFA: 311 KB (2159 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.20u 0.11s 44.31t Elapsed: 00:00:02
Total cpu time: 44.20u 0.11s 44.31t Elapsed: 00:00:03
Start: Tue May 21 00:32:31 2013 End: Tue May 21 00:32:34 2013