BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004300
(762 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P93022|ARFG_ARATH Auxin response factor 7 OS=Arabidopsis thaliana GN=ARF7 PE=1 SV=2
Length = 1164
Score = 470 bits (1209), Expect = e-131, Method: Compositional matrix adjust.
Identities = 255/371 (68%), Positives = 297/371 (80%), Gaps = 20/371 (5%)
Query: 400 VQPQQLPMNQPQ-NQNRPLTG-TRAHSNHTDG-DAPSCSTSPSSNNCQISPSNFLNRNQQ 456
+QP Q+ +++PQ QN P+ G +A+S TDG DAPS STSPS+NNCQIS S FLNR+Q
Sbjct: 806 LQPPQMLVSRPQEKQNPPVGGGVKAYSGITDGGDAPSSSTSPSTNNCQISSSGFLNRSQS 865
Query: 457 GPAMLMGDSVVEPSSNLVQELHSKSDARIKHELPISKGPEHLKYNGSMTD-QVEASSSGT 515
GPA+L+ D+ ++ S NLVQ+L+SKSD R+K EL + K S+TD Q+EAS+SGT
Sbjct: 866 GPAILIPDAAIDMSGNLVQDLYSKSDMRLKQELVGQQ-----KSKASLTDHQLEASASGT 920
Query: 516 SYCLDPG--NIQQNFSLPTYCLDGDTQSHPRNSLPFVANID-GMAPDTLLSRGYDSQKDL 572
SY LD G N QQNF PT+ LDGD+ RNSL AN+D G PDTLLSRGYDSQKDL
Sbjct: 921 SYGLDGGENNRQQNFLAPTFGLDGDS----RNSLLGGANVDNGFVPDTLLSRGYDSQKDL 976
Query: 573 HNLLSNYGGTPRDIETELSTAAISSQSFAVPNIPFKPACSNEVGINEAGVLGNGLWANQT 632
N+LSNYGG DI TE+ST+A+ +QSF VPN+P A SN++ +N+AGVLG GLW QT
Sbjct: 977 QNMLSNYGGVTNDIGTEMSTSAVRTQSFGVPNVP---AISNDLAVNDAGVLGGGLWPAQT 1033
Query: 633 QRMRTFTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHE 692
QRMRT+TKVQKRGSVGRSIDV RY+GYDELRHDLARMFGIEGQLEDPQ+SDWKLVYVDHE
Sbjct: 1034 QRMRTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHE 1093
Query: 693 NDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDGDLGNLPVPNQACSGSDSGNAWR-H 751
NDILLVGDDPW+EFV+CVQSIKILSSAEVQQMSLDG+ +PV NQACSG DSGNAWR H
Sbjct: 1094 NDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQACSGGDSGNAWRGH 1153
Query: 752 YDDNSAASFNR 762
YDDNSA SFNR
Sbjct: 1154 YDDNSATSFNR 1164
>sp|A3B9A0|ARFP_ORYSJ Auxin response factor 16 OS=Oryza sativa subsp. japonica GN=ARF16
PE=2 SV=1
Length = 1055
Score = 338 bits (867), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 195/350 (55%), Positives = 240/350 (68%), Gaps = 10/350 (2%)
Query: 403 QQLPMNQPQNQNRPLTGTRAHSNHTD-GDAPSCSTSPSSNNCQISPSNFLNRNQQGPAML 461
QQ P+N P R+HS + GD S+S + + +ISP N L+R QG L
Sbjct: 713 QQAPLNHMTGSLTPQQLVRSHSALAESGDP---SSSTAPSTSRISPINSLSRANQGSRNL 769
Query: 462 MGDSVVEP-SSNLVQELHSKSDARIKHELPISKGPEHLKYNGSMTDQVEASSSGTSYCLD 520
D V P NL+QE+ SK D RIK+++ SK + ++DQ++ASS+ TS+CLD
Sbjct: 770 T-DMVATPQIDNLLQEIQSKPDNRIKNDIQ-SKETVPIHNRHPVSDQLDASSA-TSFCLD 826
Query: 521 PGNIQQNFSLPTYCLDGDTQSHPRNSLPFVANIDGMAPDTLLSRGYDSQKDLHNLLSNYG 580
+ ++ FS P CLD + Q PR++ N+D + PD LLSRG S K + L S
Sbjct: 827 E-SPREGFSFPPVCLDNNVQVDPRDNFLIAENVDALMPDALLSRGMASGKGMCTLTSGQR 885
Query: 581 GTPRDIETELSTAAISSQSFAVPNIPFKPACSNEVGINEAGVLGNGLWANQTQRMRTFTK 640
RD+E ELS+AA SSQSF VP++ FKP CS++V + +AG+ GLW NQTQRMRTFTK
Sbjct: 886 DH-RDVENELSSAAFSSQSFGVPDMSFKPGCSSDVAVTDAGMPSQGLWNNQTQRMRTFTK 944
Query: 641 VQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILLVGD 700
VQKRGSVGRSID+TRY+ YDELRHDLA MFGI+GQLEDP DWKLVYVDHENDILLVGD
Sbjct: 945 VQKRGSVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDILLVGD 1004
Query: 701 DPWDEFVSCVQSIKILSSAEVQQMSLDGDLGNLPVPNQACSGSDSGNAWR 750
DPW+EFV CV+SIKILS+AEVQQMSLDGDLG +P QACS SD NAWR
Sbjct: 1005 DPWEEFVGCVKSIKILSAAEVQQMSLDGDLGGVPPQTQACSASDDANAWR 1054
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 66/100 (66%), Gaps = 13/100 (13%)
Query: 9 DDESDIENAFKRAMPWLGDDFGMKDATSSIFPGLSLVQWMSMQQNNQFPAAQSGFFPSMV 68
DDE+++E+AFKRAMPWL DDF +KD S++FPGLSLVQWM+MQQN Q A S V
Sbjct: 382 DDENEVESAFKRAMPWLADDFALKDVQSALFPGLSLVQWMAMQQNPQMLTAAS----QTV 437
Query: 69 SSTGLHSN-------FGT--DDPSKLLNFQASALAAPNLQ 99
S L+SN G+ +DP+K LN QA + PNLQ
Sbjct: 438 QSPYLNSNALAMQDVMGSSNEDPTKRLNTQAQNMVLPNLQ 477
>sp|A2YAA5|ARFP_ORYSI Auxin response factor 16 OS=Oryza sativa subsp. indica GN=ARF16 PE=2
SV=1
Length = 1055
Score = 338 bits (866), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 195/350 (55%), Positives = 240/350 (68%), Gaps = 10/350 (2%)
Query: 403 QQLPMNQPQNQNRPLTGTRAHSNHTD-GDAPSCSTSPSSNNCQISPSNFLNRNQQGPAML 461
QQ P+N P R+HS + GD S+S + + +ISP N L+R QG L
Sbjct: 713 QQAPLNHMTGSLTPQQLVRSHSALAESGDP---SSSTAPSTSRISPINSLSRANQGSRNL 769
Query: 462 MGDSVVEP-SSNLVQELHSKSDARIKHELPISKGPEHLKYNGSMTDQVEASSSGTSYCLD 520
D V P NL+QE+ SK D RIK+++ SK + ++DQ++ASS+ TS+CLD
Sbjct: 770 T-DMVATPQIDNLLQEIQSKPDNRIKNDIQ-SKETVPIHNRHPVSDQLDASSA-TSFCLD 826
Query: 521 PGNIQQNFSLPTYCLDGDTQSHPRNSLPFVANIDGMAPDTLLSRGYDSQKDLHNLLSNYG 580
+ ++ FS P CLD + Q PR++ N+D + PD LLSRG S K + L S
Sbjct: 827 E-SPREGFSFPPVCLDNNVQVDPRDNFLIAENVDALMPDALLSRGMASGKGMCTLTSGQR 885
Query: 581 GTPRDIETELSTAAISSQSFAVPNIPFKPACSNEVGINEAGVLGNGLWANQTQRMRTFTK 640
RD+E ELS+AA SSQSF VP++ FKP CS++V + +AG+ GLW NQTQRMRTFTK
Sbjct: 886 DH-RDVENELSSAAFSSQSFGVPDMSFKPGCSSDVAVTDAGMPSQGLWNNQTQRMRTFTK 944
Query: 641 VQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILLVGD 700
VQKRGSVGRSID+TRY+ YDELRHDLA MFGI+GQLEDP DWKLVYVDHENDILLVGD
Sbjct: 945 VQKRGSVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDILLVGD 1004
Query: 701 DPWDEFVSCVQSIKILSSAEVQQMSLDGDLGNLPVPNQACSGSDSGNAWR 750
DPW+EFV CV+SIKILS+AEVQQMSLDGDLG +P QACS SD NAWR
Sbjct: 1005 DPWEEFVGCVKSIKILSAAEVQQMSLDGDLGGVPPQTQACSASDDANAWR 1054
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 66/100 (66%), Gaps = 13/100 (13%)
Query: 9 DDESDIENAFKRAMPWLGDDFGMKDATSSIFPGLSLVQWMSMQQNNQFPAAQSGFFPSMV 68
DDE+++E+AFKRAMPWL DDF +KD S++FPGLSLVQWM+MQQN Q A S V
Sbjct: 382 DDENEVESAFKRAMPWLADDFALKDVQSALFPGLSLVQWMAMQQNPQMLTAAS----QTV 437
Query: 69 SSTGLHSN-------FGT--DDPSKLLNFQASALAAPNLQ 99
S L+SN G+ +DP+K LN QA + PNLQ
Sbjct: 438 QSPYLNSNALAMQDVMGSSNEDPTKRLNTQAQNMVLPNLQ 477
>sp|Q0D9R7|ARFS_ORYSJ Auxin response factor 19 OS=Oryza sativa subsp. japonica GN=ARF19
PE=2 SV=2
Length = 1161
Score = 229 bits (583), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 162/414 (39%), Positives = 220/414 (53%), Gaps = 55/414 (13%)
Query: 387 QQQLSNNLSASVLVQPQQLPMNQPQNQNRPLTGTRAHSNHTDGDAPSCSTSPSSNNCQIS 446
Q L++ A+V P +N PL T A + + PSCSTSPS+ N
Sbjct: 742 QAMLADTSEAAV---PPTTSVNVISTTGSPLMTTGATHSVLTEEIPSCSTSPSTANGNHL 798
Query: 447 PSNFLNRNQQGPAMLMGDSV---------------VEPSSNLVQELHSKSDARIKHELPI 491
L RN+ +M+ + V V + ++++ K + +K +
Sbjct: 799 LQPILGRNKHC-SMINTEKVPQSAAPMSVPSSLEAVTATPRMMKD-SPKLNHNVKQSVVA 856
Query: 492 SK------GPEHLKYNGSMTDQVEASSSGTSYCL--DPGNIQQNFSL-----PTYCLDG- 537
SK G ++ N TD +E +SS TS L + G + QNF + P D
Sbjct: 857 SKLANAGTGSQNYVNNPPPTDYLETASSATSVWLSQNDGLLHQNFPMSNFNQPQMFKDAP 916
Query: 538 -DTQSHPRNS---LPFVANIDG-------MAPDTLLSRGYDSQKDLHNL---LSNYGGTP 583
D + H N+ F N DG + D LS G D+ K +++ + N P
Sbjct: 917 PDAEIHAANTSNNALFGINGDGPLGFPIGLGTDDFLSNGIDAAKYENHISTEIDNSYRIP 976
Query: 584 RDIETELSTAAISSQSFAVPNIPFKPACSNEVGINEAGVLGNGLW--ANQTQRMRTFTKV 641
+D + E+S++ +S QSF ++ F S + IN+ G L W A +RMRTFTKV
Sbjct: 977 KDAQQEISSSMVS-QSFGASDMAFN---SIDSTINDGGFLNRSSWPPAAPLKRMRTFTKV 1032
Query: 642 QKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILLVGDD 701
KRG+VGRSID++++ GYDEL+H LARMF IEGQLE+ Q WKLVY DHE+DILL+GDD
Sbjct: 1033 YKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDD 1092
Query: 702 PWDEFVSCVQSIKILSSAEVQQMSLDG-DLGNLPVPNQACSGSDSGNAWRHYDD 754
PW+EFV CV+ I+ILS EVQQMSL+G DLGN PNQACS SD GNAWR D
Sbjct: 1093 PWEEFVGCVKCIRILSPQEVQQMSLEGCDLGNNIPPNQACSSSDGGNAWRARCD 1146
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 6/65 (9%)
Query: 9 DDESDIENAFKRAMPWLGDDFGMKD--ATSSIFPGLSLVQW--MSMQQNNQFP--AAQSG 62
D+ S++EN KRAMPWLG++ +KD ++I PGLSLVQW M+MQQ++ F A QS
Sbjct: 408 DESSEMENLLKRAMPWLGEEICIKDPQTQNTIMPGLSLVQWMNMNMQQSSSFANTAMQSE 467
Query: 63 FFPSM 67
+ S+
Sbjct: 468 YLRSL 472
>sp|Q6YZW0|ARFU_ORYSJ Auxin response factor 21 OS=Oryza sativa subsp. japonica GN=ARF21
PE=2 SV=2
Length = 1116
Score = 213 bits (541), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/273 (46%), Positives = 164/273 (60%), Gaps = 30/273 (10%)
Query: 506 DQVEASSSGTSYCLD--PGNIQQNF---SLPTYCLDGDTQ-------SHPRNSLPFVANI 553
D ++ SSS TS CL G++QQNF S + L DT + PRN+L F NI
Sbjct: 850 DYLDTSSSATSVCLSQADGSLQQNFPPSSFHQHHLLKDTVPDSEFEVTDPRNNLLFGVNI 909
Query: 554 DG-----MAPDTLLSRGYDSQKDLHNL----LSNYGGTPRDIETELSTAAISSQSFAVPN 604
DG + D LL+ + K + L +SN+ + +D + ELS++ IS SF V +
Sbjct: 910 DGQLGLPLNAD-LLANDIGTDKYMDQLPGNGISNFISS-KDSQQELSSSMIS-HSFGVAD 966
Query: 605 IPFKPACSNEVGINEAGVLGNGLWANQT---QRMRTFTKVQKRGSVGRSIDVTRYKGYDE 661
+ F S + IN+ L + QRMRT+TKV KRG+VGRSID+ RY GYDE
Sbjct: 967 MAFN---SIDSAINDTPFLNRNSRSAAGPAHQRMRTYTKVHKRGAVGRSIDINRYSGYDE 1023
Query: 662 LRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWDEFVSCVQSIKILSSAEV 721
L+HD+ARMFGIEGQL D WKLVY DHE D+LLVGDDPW++FV CV+ I+ILS E
Sbjct: 1024 LKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKDVLLVGDDPWEDFVKCVRCIRILSPQEE 1083
Query: 722 QQMSLDGDLGNLPVPNQACSGSDSGNAWRHYDD 754
QM L GD G+ +PNQACS SD G+ WR D
Sbjct: 1084 MQMRLVGDFGDSFLPNQACSSSDGGHPWRITGD 1116
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 7 FADDESDIENAFKRAMPWLGDDFGMKDAT--SSIFPGLSLVQWMSMQQNNQFPAAQSGFF 64
DDE++++ KRAMPW+G++ KD +S+ PGL+L QWM+MQ ++ P +
Sbjct: 386 MTDDETEMDGLLKRAMPWVGEEICKKDLNIQNSVVPGLNLAQWMNMQHSSSLPG--TVVQ 443
Query: 65 PSMVSSTGLH--SNFGTDDPSKLLNFQASALAAPNLQFSKA 103
P +++S N D S+ ++F L N+QF+ A
Sbjct: 444 PELLNSLSGKPVQNLAAADLSRQISFHPQFLQQNNIQFNTA 484
>sp|Q8S983|ARFK_ORYSJ Auxin response factor 11 OS=Oryza sativa subsp. japonica GN=ARF11
PE=2 SV=1
Length = 955
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 83/94 (88%)
Query: 635 MRTFTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEND 694
+RT+TKVQK+GSVGRSIDVT ++ Y ELR +A MFG++G+LE P SS+WKLVYVD+END
Sbjct: 851 VRTYTKVQKQGSVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 910
Query: 695 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDG 728
+LLVGDDPW+EF++CV+ I+ILS +EVQQMS +G
Sbjct: 911 VLLVGDDPWEEFINCVRCIRILSPSEVQQMSENG 944
>sp|Q01K26|ARFK_ORYSI Auxin response factor 11 OS=Oryza sativa subsp. indica GN=ARF11
PE=2 SV=2
Length = 955
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 83/94 (88%)
Query: 635 MRTFTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEND 694
+RT+TKVQK+GSVGRSIDVT ++ Y ELR +A MFG++G+LE P SS+WKLVYVD+END
Sbjct: 851 VRTYTKVQKQGSVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 910
Query: 695 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDG 728
+LLVGDDPW+EF++CV+ I+ILS +EVQQMS +G
Sbjct: 911 VLLVGDDPWEEFINCVRCIRILSPSEVQQMSENG 944
>sp|P93024|ARFE_ARATH Auxin response factor 5 OS=Arabidopsis thaliana GN=ARF5 PE=1 SV=3
Length = 902
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/97 (68%), Positives = 80/97 (82%)
Query: 632 TQRMRTFTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDH 691
T R+RT+TKVQK GSVGRSIDVT +K Y+EL+ + MFG+EG L PQSS WKLVYVD+
Sbjct: 789 TPRVRTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDY 848
Query: 692 ENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDG 728
E+D+LLVGDDPW+EFV CV+ I+ILS EVQQMS +G
Sbjct: 849 ESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEG 885
>sp|Q6H6V4|ARFF_ORYSJ Auxin response factor 6 OS=Oryza sativa subsp. japonica GN=ARF6
PE=1 SV=1
Length = 908
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 125/229 (54%), Gaps = 26/229 (11%)
Query: 509 EASSSGTSYCLDPGNIQQNFSLPTY----CL-DGDTQSHPRNSLPFVANIDGMAPDTLLS 563
+ SS ++ L P +I QN +L CL D D S P+N F NID +LL
Sbjct: 658 DISSQIENFDLTPSSIPQNSTLAPLPGRECLVDQDGSSDPQNHFLFGVNIDS---QSLLM 714
Query: 564 RGYDSQKDLHNLLSNYGGTPRDIETELSTAAISSQSFAVP---NIPFKPACSNEVGINEA 620
+ D LHN E ST S+ +F P + P + ++E+
Sbjct: 715 Q--DGIPSLHN------------ENSSSTIPYSTSNFLSPSQDDYPLSQTLTTPGCLDES 760
Query: 621 GVLGNGLWANQTQR-MRTFTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDP 679
G + A+Q +R TF KV K G+VGR +D+TR+ Y ELR ++ R+FG+EGQLEDP
Sbjct: 761 GYVPCSDNADQVKRPHATFVKVYKSGTVGRLLDITRFSSYHELRSEVGRLFGLEGQLEDP 820
Query: 680 QSSDWKLVYVDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDG 728
S W+LV+VD E+D+LLVGDDPW EFV+ V IKILS EVQQM G
Sbjct: 821 LRSGWQLVFVDREDDVLLVGDDPWQEFVNSVSCIKILSPQEVQQMGKPG 869
>sp|A2X1A1|ARFF_ORYSI Auxin response factor 6 OS=Oryza sativa subsp. indica GN=ARF6 PE=2
SV=1
Length = 908
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 125/229 (54%), Gaps = 26/229 (11%)
Query: 509 EASSSGTSYCLDPGNIQQNFSLPTY----CL-DGDTQSHPRNSLPFVANIDGMAPDTLLS 563
+ SS ++ L P +I QN +L CL D D S P+N F NID +LL
Sbjct: 658 DISSQIENFDLTPSSIPQNSTLAPLPGRECLVDQDGSSDPQNHFLFGVNIDS---QSLLM 714
Query: 564 RGYDSQKDLHNLLSNYGGTPRDIETELSTAAISSQSFAVP---NIPFKPACSNEVGINEA 620
+ D LHN E ST S+ +F P + P + ++E+
Sbjct: 715 Q--DGIPSLHN------------ENSSSTIPYSTSNFLSPSQDDYPLSQTLTTPGCLDES 760
Query: 621 GVLGNGLWANQTQR-MRTFTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDP 679
G + A+Q +R TF KV K G+VGR +D+TR+ Y ELR ++ R+FG+EGQLEDP
Sbjct: 761 GYVPCSDNADQVKRPHATFVKVYKSGTVGRLLDITRFSSYHELRSEVGRLFGLEGQLEDP 820
Query: 680 QSSDWKLVYVDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDG 728
S W+LV+VD E+D+LLVGDDPW EFV+ V IKILS EVQQM G
Sbjct: 821 LRSGWQLVFVDREDDVLLVGDDPWQEFVNSVSCIKILSPQEVQQMGKPG 869
>sp|Q2QM84|ARFY_ORYSJ Auxin response factor 25 OS=Oryza sativa subsp. japonica GN=ARF25
PE=2 SV=1
Length = 899
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 104/175 (59%), Gaps = 10/175 (5%)
Query: 557 APDTLLSRGYDSQKDLHNLLSNYGGTPRDIETELSTAAISSQSFAVPNIPFKPACSNEVG 616
A + LLS ++ Q + ++++ D E T AI ++ ++ + +
Sbjct: 693 AENRLLSSSFELQDGMTSIIT-------DANRETDTMAIPLLRYSGADLTTENTLATSNC 745
Query: 617 INEAGVLG--NGLWANQTQRMRTFTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEG 674
+ E+G N + N +Q TF KV K GS+GRS+D++R+ Y ELR +L R+FG+EG
Sbjct: 746 LGESGTFNPLNNISVNPSQGA-TFVKVYKSGSLGRSLDISRFSSYCELRSELERLFGLEG 804
Query: 675 QLEDPQSSDWKLVYVDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDGD 729
QLEDP S W+LV+VD ENDILLVGDDPW EF + V IKILS EVQQ+ GD
Sbjct: 805 QLEDPVRSGWQLVFVDRENDILLVGDDPWQEFANSVWCIKILSPQEVQQLVRGGD 859
>sp|A2YG67|ARFQ_ORYSI Auxin response factor 17 OS=Oryza sativa subsp. indica GN=ARF17
PE=2 SV=1
Length = 917
Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 112/199 (56%), Gaps = 27/199 (13%)
Query: 534 CL-DGDTQSHPRNSLPFVANIDGMAPDTLLSRGYDSQKDLHNLLSNYGGTPRDIETELST 592
CL D D S P+N L F NID SQ L GG P ++ E +
Sbjct: 695 CLVDQDGNSDPQNHLLFGVNID-------------SQSLLMQ-----GGIP-SLQGENDS 735
Query: 593 AAI--SSQSFAVP---NIPFKPACSNEVGINEAGVLGNGLWANQTQRM--RTFTKVQKRG 645
AI S+ +F P + P S+ ++E+G + ++Q TF KV K G
Sbjct: 736 TAIPYSTSNFLSPLQNDFPLDQTLSSADCLDESGYVPCSQNSDQVINRPPATFVKVYKSG 795
Query: 646 SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWDE 705
+ GRS+D+TR+ Y ELR +L R+FG+EGQLE+P S W+LV+VD E+D+LLVGDDPW E
Sbjct: 796 TYGRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLVGDDPWQE 855
Query: 706 FVSCVQSIKILSSAEVQQM 724
FV+ V IKILS EVQQM
Sbjct: 856 FVNSVSCIKILSPQEVQQM 874
>sp|Q653U3|ARFQ_ORYSJ Auxin response factor 17 OS=Oryza sativa subsp. japonica GN=ARF17
PE=2 SV=1
Length = 917
Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 112/199 (56%), Gaps = 27/199 (13%)
Query: 534 CL-DGDTQSHPRNSLPFVANIDGMAPDTLLSRGYDSQKDLHNLLSNYGGTPRDIETELST 592
CL D D S P+N L F NID SQ L GG P ++ E +
Sbjct: 695 CLVDQDGNSDPQNHLLFGVNID-------------SQSLLMQ-----GGIP-SLQGENDS 735
Query: 593 AAI--SSQSFAVP---NIPFKPACSNEVGINEAGVLGNGLWANQTQRM--RTFTKVQKRG 645
AI S+ +F P + P S+ ++E+G + ++Q TF KV K G
Sbjct: 736 TAIPYSTSNFLSPSQNDFPLDQTLSSADCLDESGYVPCSQNSDQVINRPPATFVKVYKSG 795
Query: 646 SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWDE 705
+ GRS+D+TR+ Y ELR +L R+FG+EGQLE+P S W+LV+VD E+D+LLVGDDPW E
Sbjct: 796 TYGRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLVGDDPWQE 855
Query: 706 FVSCVQSIKILSSAEVQQM 724
FV+ V IKILS EVQQM
Sbjct: 856 FVNSVSCIKILSPQEVQQM 874
>sp|Q8RYC8|ARFS_ARATH Auxin response factor 19 OS=Arabidopsis thaliana GN=ARF19 PE=1 SV=2
Length = 1086
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/103 (62%), Positives = 80/103 (77%)
Query: 9 DDESDIENAFKRAMPWLGDDFGMKDATSSIFPGLSLVQWMSMQQNNQFPAAQSGFFPSMV 68
DDE D+ENAFKRAMPW+G+DFGMKDA SS+FPGLSLVQWMSMQQNN + + PS +
Sbjct: 381 DDELDMENAFKRAMPWMGEDFGMKDAQSSMFPGLSLVQWMSMQQNNPLSGSATPQLPSAL 440
Query: 69 SSTGLHSNFGTDDPSKLLNFQASALAAPNLQFSKANPQNQVNQ 111
SS L +NF ++DPSKLLNFQ+ L++ N QF+K N N ++Q
Sbjct: 441 SSFNLPNNFASNDPSKLLNFQSPNLSSANSQFNKPNTVNHISQ 483
>sp|Q0J951|ARFL_ORYSJ Auxin response factor 12 OS=Oryza sativa subsp. japonica GN=ARF12
PE=2 SV=1
Length = 818
Score = 129 bits (325), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 72/94 (76%)
Query: 636 RTFTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDI 695
RTF KV K GSVGRS+D+TR+ Y ELR +L +MFGI+GQL+DP S W+LV+VD END+
Sbjct: 719 RTFVKVYKSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDV 778
Query: 696 LLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDGD 729
LL+GDDPW+ FV+ V IKILS +V +M G+
Sbjct: 779 LLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGN 812
>sp|Q258Y5|ARFL_ORYSI Auxin response factor 12 OS=Oryza sativa subsp. indica GN=ARF12
PE=2 SV=1
Length = 816
Score = 129 bits (325), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 72/94 (76%)
Query: 636 RTFTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDI 695
RTF KV K GSVGRS+D+TR+ Y ELR +L +MFGI+GQL+DP S W+LV+VD END+
Sbjct: 717 RTFVKVYKSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDV 776
Query: 696 LLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDGD 729
LL+GDDPW+ FV+ V IKILS +V +M G+
Sbjct: 777 LLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGN 810
>sp|Q9FGV1|ARFH_ARATH Auxin response factor 8 OS=Arabidopsis thaliana GN=ARF8 PE=2 SV=2
Length = 811
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 72/100 (72%)
Query: 630 NQTQRMRTFTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYV 689
N + + + F KV K GSVGRS+D++R+ Y ELR +L +MF IEG LEDP S W+LV+V
Sbjct: 699 NSSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFV 758
Query: 690 DHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDGD 729
D ENDILL+GDDPW+ FV+ V IKILS +V QM G+
Sbjct: 759 DKENDILLLGDDPWESFVNNVWYIKILSPEDVHQMGDHGE 798
>sp|Q5JK20|ARFD_ORYSJ Auxin response factor 4 OS=Oryza sativa subsp. japonica GN=ARF4
PE=2 SV=1
Length = 808
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 80/122 (65%), Gaps = 13/122 (10%)
Query: 630 NQTQRMRTFTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVY 688
Q R+ TKV K+G ++GRS+D++++ YDEL+ +L +MF +G+L + +W++VY
Sbjct: 686 TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGELVS-SNKNWQIVY 744
Query: 689 VDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQM-----------SLDGDLGNLPVPN 737
D+E D++LVGDDPW+EF S V+ I I + EVQ+M S + + G+LP+PN
Sbjct: 745 TDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAPRKDDSSENEKGHLPMPN 804
Query: 738 QA 739
++
Sbjct: 805 KS 806
>sp|Q6YVY0|ARFG_ORYSJ Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7
PE=2 SV=1
Length = 678
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
Query: 630 NQTQRMRTFTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVY 688
Q++++R+ TKV +G +VGR++D+TR GYD+LR L MF I+G+L WK+VY
Sbjct: 542 TQSRQVRSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQGEL-SASLKKWKVVY 600
Query: 689 VDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 725
D E+D++LVGDDPW EF S V+ I I + E +Q++
Sbjct: 601 TDDEDDMMLVGDDPWPEFCSMVKRIYIYTYEEAKQLT 637
>sp|Q9ZTX9|ARFD_ARATH Auxin response factor 4 OS=Arabidopsis thaliana GN=ARF4 PE=1 SV=1
Length = 788
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
Query: 631 QTQRMRTFTKVQKRGS-VGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYV 689
Q+ R TKV K+GS VGR+ID++R GYD+L +L R+F +EG L DP+ W+++Y
Sbjct: 660 QSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEKG-WRILYT 718
Query: 690 DHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSLD 727
D END+++VGDDPW +F + V I + + EV+ + D
Sbjct: 719 DSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDD 756
>sp|Q94JM3|ARFB_ARATH Auxin response factor 2 OS=Arabidopsis thaliana GN=ARF2 PE=1 SV=2
Length = 859
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
Query: 630 NQTQRMRTFTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVY 688
+T R+ TKV K+G ++GRS+D+++++ Y+EL +L R+F G+L P+ DW +VY
Sbjct: 727 TKTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKK-DWLIVY 785
Query: 689 VDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQM 724
D END++LVGDDPW EF V+ I I + EV++M
Sbjct: 786 TDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
>sp|Q0JCZ4|ARFI_ORYSJ Auxin response factor 9 OS=Oryza sativa subsp. japonica GN=ARF9
PE=2 SV=1
Length = 673
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 80/135 (59%), Gaps = 6/135 (4%)
Query: 630 NQTQRMRTFTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVY 688
+Q++++R+ TKV +G +VGR++D+T+ GY +LR L MF I+G L P W++VY
Sbjct: 541 SQSRQVRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDL-CPTLKRWQVVY 599
Query: 689 VDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDGDLGNLPVPNQACSGSDSGNA 748
D E+D++LVGDDPWDEF S V+ I I S E + ++ LPV S ++
Sbjct: 600 TDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPK---SKLPVIGDTIKLSSMNSS 656
Query: 749 WRHYD-DNSAASFNR 762
D DN A+ NR
Sbjct: 657 HESVDLDNHASVTNR 671
>sp|Q2R3F5|ARFW_ORYSJ Auxin response factor 23 OS=Oryza sativa subsp. japonica GN=ARF23
PE=1 SV=2
Length = 853
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 636 RTFTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEND 694
R+ KV K+G ++GRS+D+T++ GY+EL +L MF G+L+ P+ +W +VY D+E D
Sbjct: 725 RSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKK-EWMVVYTDNEGD 783
Query: 695 ILLVGDDPWDEFVSCVQSIKILSSAEVQQM 724
++LVGDDPW EF V I I + EVQ+M
Sbjct: 784 MMLVGDDPWIEFCDMVHKIFIYTREEVQRM 813
>sp|A2ZET6|ARFW_ORYSI Auxin response factor 23 OS=Oryza sativa subsp. indica GN=ARF23
PE=2 SV=1
Length = 853
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 636 RTFTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEND 694
R+ KV K+G ++GRS+D+T++ GY+EL +L MF G+L+ P+ +W +VY D+E D
Sbjct: 725 RSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKK-EWMVVYTDNEGD 783
Query: 695 ILLVGDDPWDEFVSCVQSIKILSSAEVQQM 724
++LVGDDPW EF V I I + EVQ+M
Sbjct: 784 MMLVGDDPWIEFCDMVHKIFIYTREEVQRM 813
>sp|Q8L7G0|ARFA_ARATH Auxin response factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2
Length = 665
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
Query: 630 NQTQRMRTFTKVQKRGS-VGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVY 688
+Q++++R+ TKV +GS VGR+ID+TR + Y++L L MF I+G+L + + W++VY
Sbjct: 536 SQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLE-STKKWQVVY 594
Query: 689 VDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 725
D E+D+++VGDDPW+EF V+ I I + EV+++S
Sbjct: 595 TDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLS 631
>sp|Q2QQX6|ARFX_ORYSJ Auxin response factor 24 OS=Oryza sativa subsp. japonica GN=ARF24
PE=2 SV=1
Length = 841
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 636 RTFTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEND 694
R+ KV K+G ++GRSID+T++ YDEL +L +MF G+L + S +W +VY D+E D
Sbjct: 713 RSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGEL-NSSSKNWMVVYTDNEGD 771
Query: 695 ILLVGDDPWDEFVSCVQSIKILSSAEVQQM 724
++LVGDDPW+EF + V I I + EVQ+M
Sbjct: 772 MMLVGDDPWNEFCNMVHKIFIYTREEVQKM 801
>sp|Q9XED8|ARFI_ARATH Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=1 SV=1
Length = 638
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Query: 629 ANQTQRMRTFTKVQKRGS-VGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLV 687
+ Q+ R+ TKVQ +G VGR++D+ KGY+EL D+ ++F I+G+L + W++V
Sbjct: 516 SKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELR--SRNQWEIV 573
Query: 688 YVDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 725
+ D E D++LVGDDPW EF + V+ I I S EV++M+
Sbjct: 574 FTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMT 611
>sp|Q6Z2W3|ARFE_ORYSJ Auxin response factor 5 OS=Oryza sativa subsp. japonica GN=ARF5
PE=2 SV=2
Length = 1142
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 92/172 (53%), Gaps = 15/172 (8%)
Query: 9 DDESDIENAFKRAMPWLGDDFGMKDA--TSSIFPGLSLVQWMSM--QQNNQFP--AAQSG 62
DDES++EN FKRAMPWLG++ +KD +S PGLSLVQWM+M QQ++ AAQS
Sbjct: 401 DDESEMENLFKRAMPWLGEEVCIKDTQNQNSTAPGLSLVQWMNMNRQQSSSLANTAAQSE 460
Query: 63 FFPSMVSSTGLHSNFGTDDPSKLLNFQASALAAPNLQF-SKANPQNQ--VNQLPQSPIAW 119
+ ++ + N D+ ++ L Q + L +QF S PQ +N L ++ I
Sbjct: 461 YLQALGNPA--MQNLAADELARQLYVQNNLLQQNCIQFNSPKLPQQMQTMNDLSKAAIPL 518
Query: 120 TQQQQL---QHLLQNPLNQQQQQHP-QLHQQRQQQQQLLHPQQSQQQQQQQQ 167
Q + Q Q+ +N Q+QQ+ Q+ Q Q L+ Q Q Q QQQ
Sbjct: 519 NQLGAIINPQDQKQDAVNHQRQQNSIQVIPLSQAQSNLVQAQVIVQNQMQQQ 570
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.125 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 287,056,401
Number of Sequences: 539616
Number of extensions: 13095812
Number of successful extensions: 318133
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1843
Number of HSP's successfully gapped in prelim test: 2095
Number of HSP's that attempted gapping in prelim test: 75420
Number of HSP's gapped (non-prelim): 57742
length of query: 762
length of database: 191,569,459
effective HSP length: 125
effective length of query: 637
effective length of database: 124,117,459
effective search space: 79062821383
effective search space used: 79062821383
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)