Query 004301
Match_columns 762
No_of_seqs 499 out of 3216
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 20:48:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004301.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004301hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 5E-126 2E-130 1100.7 51.5 634 107-762 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 8E-113 3E-117 993.5 50.6 613 107-761 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 2.1E-83 7.3E-88 775.4 44.7 536 120-761 7-605 (926)
4 3afg_A Subtilisin-like serine 100.0 1.8E-61 6E-66 551.6 32.0 367 27-612 33-419 (539)
5 2z2z_A TK-subtilisin precursor 100.0 2E-59 6.8E-64 518.1 20.7 342 29-611 2-392 (395)
6 3t41_A Epidermin leader peptid 100.0 2E-57 6.9E-62 514.9 25.8 356 28-612 43-466 (471)
7 2p4e_P Proprotein convertase s 100.0 1.6E-59 5.4E-64 537.3 7.2 333 30-577 76-422 (692)
8 1y9z_A Alkaline serine proteas 100.0 2.6E-55 8.8E-60 492.2 26.9 384 114-632 6-437 (441)
9 1r6v_A Subtilisin-like serine 100.0 3.5E-55 1.2E-59 505.1 25.4 374 26-622 28-450 (671)
10 1dbi_A AK.1 serine protease; h 100.0 9.9E-52 3.4E-56 435.1 24.2 265 113-610 12-279 (280)
11 1gci_A Subtilisin; hydrolase, 100.0 1.8E-51 6.2E-56 430.3 22.8 262 113-610 5-269 (269)
12 1r0r_E Subtilisin carlsberg; h 100.0 1.5E-51 5.1E-56 432.6 21.1 262 114-610 6-274 (274)
13 4h6x_A Thiazoline oxidase/subt 100.0 1.1E-53 3.8E-58 465.5 3.9 306 120-610 21-337 (357)
14 1to2_E Subtilisin BPN'; serine 100.0 4.9E-51 1.7E-55 430.0 21.9 265 113-611 5-276 (281)
15 1thm_A Thermitase; hydrolase(s 100.0 1E-50 3.5E-55 427.3 23.6 264 113-610 12-278 (279)
16 2x8j_A Intracellular subtilisi 100.0 2E-51 6.9E-56 442.1 17.5 271 112-610 21-310 (327)
17 2ixt_A 36KDA protease; serine 100.0 3.6E-50 1.2E-54 430.6 25.8 289 113-605 7-309 (310)
18 3zxy_A Subtilisin-like protein 100.0 3.3E-51 1.1E-55 432.5 14.6 264 126-610 3-274 (282)
19 2z30_A TK-subtilisin; thermoco 100.0 7.1E-51 2.4E-55 437.3 16.7 271 113-611 9-317 (320)
20 2iy9_A SUBA; toxin, shiga, pla 100.0 2E-50 6.8E-55 439.3 14.5 277 113-611 24-329 (347)
21 4h6w_A N-terminal cyanobactin 100.0 1.7E-50 5.9E-55 432.6 12.5 270 120-610 11-287 (306)
22 3lpc_A APRB2; protease, subtil 100.0 2.4E-49 8.2E-54 429.9 17.3 303 119-612 21-338 (340)
23 1wmd_A Protease; alpha-beta hy 100.0 1.6E-48 5.3E-53 436.8 21.1 291 120-612 11-319 (434)
24 1sh7_A Extracellular subtilisi 100.0 4E-48 1.4E-52 407.9 23.0 235 120-578 19-257 (284)
25 3lxu_X Tripeptidyl-peptidase 2 100.0 5.1E-48 1.7E-52 462.6 26.2 355 206-760 267-651 (1354)
26 2pwa_A Proteinase K; structure 100.0 7.2E-48 2.5E-52 404.9 17.6 240 122-606 24-272 (279)
27 2b6n_A Proteinase K; S binding 100.0 4.9E-47 1.7E-51 399.1 23.5 236 120-577 21-260 (278)
28 4dzt_A Aqualysin-1, aqualysin- 100.0 2E-47 6.7E-52 402.3 20.3 235 120-578 21-259 (276)
29 2oxa_A Extracellular serine pr 100.0 2E-46 6.9E-51 435.6 23.5 297 120-615 60-429 (600)
30 2qtw_B Proprotein convertase s 100.0 2.1E-46 7.2E-51 418.4 20.5 278 122-610 18-313 (546)
31 1p8j_A Furin precursor; prohor 100.0 1.1E-46 3.6E-51 425.5 17.4 292 119-613 27-332 (471)
32 3f7m_A Alkaline serine proteas 100.0 1.2E-45 4.1E-50 389.3 18.0 228 122-578 25-261 (279)
33 2id4_A Kexin; KEX2, kexin, fur 100.0 1.3E-45 4.4E-50 419.3 18.9 283 120-613 44-344 (503)
34 3hjr_A Extracellular serine pr 100.0 3.9E-43 1.3E-47 409.5 24.9 316 120-612 60-426 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 5.9E-26 2E-30 258.4 7.2 96 237-336 274-383 (552)
36 1ga6_A Serine-carboxyl protein 99.9 1.3E-22 4.6E-27 220.0 9.9 99 238-336 90-206 (372)
37 3edy_A Tripeptidyl-peptidase 1 99.1 2.3E-10 7.8E-15 129.3 9.6 76 261-336 284-374 (544)
38 2w2n_P Proprotein convertase s 99.0 4.9E-10 1.7E-14 99.9 7.1 78 28-105 36-113 (114)
39 3cnq_P Subtilisin BPN'; unclea 98.9 3.8E-09 1.3E-13 88.1 8.9 74 27-109 6-79 (80)
40 2qtw_A Proprotein convertase s 98.8 6.3E-09 2.1E-13 93.9 7.1 78 28-105 46-123 (124)
41 3icu_A E3 ubiquitin-protein li 98.7 1.2E-07 4E-12 91.9 11.8 94 381-474 82-187 (194)
42 1v5i_B POIA1, IA-1=serine prot 98.6 6.5E-08 2.2E-12 79.5 7.9 70 30-105 3-75 (76)
43 2z30_B TK-subtilisin; thermoco 97.8 4.2E-05 1.4E-09 60.5 6.3 62 30-104 2-63 (65)
44 2ek8_A Aminopeptidase; metallo 96.4 0.016 5.4E-07 63.7 11.8 69 393-461 111-182 (421)
45 3iib_A Peptidase M28; YP_92679 95.7 0.038 1.3E-06 61.1 10.7 102 365-474 105-227 (444)
46 3kas_A Transferrin receptor pr 95.5 0.022 7.6E-07 65.4 8.2 69 393-461 128-230 (640)
47 3fed_A Glutamate carboxypeptid 94.8 0.043 1.5E-06 63.8 7.7 71 392-462 150-268 (707)
48 2ys4_A Hydrocephalus-inducing 94.4 0.075 2.6E-06 47.3 6.9 72 676-757 41-114 (122)
49 3lxu_X Tripeptidyl-peptidase 2 87.3 0.27 9.2E-06 60.3 3.3 25 125-149 31-55 (1354)
50 3qbt_B Inositol polyphosphate 85.6 3.6 0.00012 37.2 9.2 85 676-761 43-137 (140)
51 2e6j_A Hydin protein; PAPD, st 84.9 0.86 2.9E-05 39.4 4.5 67 676-747 26-93 (112)
52 1y9z_A Alkaline serine proteas 84.1 0.64 2.2E-05 51.1 4.0 32 480-519 181-212 (441)
53 2r39_A FIXG-related protein; s 79.8 6.5 0.00022 34.3 8.3 55 676-734 31-86 (118)
54 3idu_A Uncharacterized protein 79.2 6.7 0.00023 34.8 8.1 50 676-731 33-84 (127)
55 2qsv_A Uncharacterized protein 73.1 14 0.00048 36.0 9.5 66 676-747 19-85 (220)
56 3qis_A Inositol polyphosphate 68.4 23 0.00077 37.5 10.5 83 676-761 46-140 (366)
57 2x41_A Beta-glucosidase; hydro 62.0 9.6 0.00033 44.4 6.5 72 656-732 597-677 (721)
58 1w8o_A Bacterial sialidase; 3D 59.1 45 0.0015 37.6 11.5 88 658-758 363-452 (601)
59 3zyz_A Beta-D-glucoside glucoh 57.9 33 0.0011 39.8 10.0 56 676-732 613-674 (713)
60 1m1s_A WR4; structural genomic 54.1 27 0.00091 30.3 6.4 49 679-732 26-75 (116)
61 1row_A SSP-19, MSP-domain prot 53.8 28 0.00095 29.8 6.4 49 679-732 18-67 (109)
62 2l0d_A Cell surface protein; s 51.0 45 0.0015 28.8 7.4 24 676-699 19-44 (114)
63 1z9l_A Vesicle-associated memb 49.3 32 0.0011 30.2 6.4 52 676-732 27-79 (128)
64 2kq1_A BH0266 protein; solutio 47.5 5.2 0.00018 35.0 0.8 57 678-735 55-113 (119)
65 1msp_A MSP, major sperm protei 44.3 51 0.0017 28.9 6.8 50 677-731 26-76 (126)
66 1wic_A Hypothetical protein ri 43.7 46 0.0016 30.3 6.7 51 677-732 36-87 (152)
67 3abz_A Beta-glucosidase I; gly 40.1 80 0.0027 37.3 9.6 69 656-730 717-795 (845)
68 1wgl_A TOLL-interacting protei 39.9 21 0.00073 26.9 3.0 37 541-577 3-39 (59)
69 2cri_A Vesicle-associated memb 38.6 43 0.0015 30.3 5.5 51 677-732 32-83 (147)
70 4ay0_A Chaperone protein CAF1M 31.3 1.7E+02 0.0058 28.2 8.8 68 677-746 27-99 (218)
71 2kut_A Uncharacterized protein 30.6 26 0.0009 30.6 2.6 55 676-732 16-74 (122)
72 3isy_A Bsupi, intracellular pr 29.6 1.8E+02 0.0062 25.2 7.8 69 676-747 18-104 (120)
73 2qsv_A Uncharacterized protein 29.3 1.1E+02 0.0036 29.5 7.1 65 676-747 134-203 (220)
74 3q48_A Chaperone CUPB2; IG fol 28.5 2.6E+02 0.0088 27.7 9.8 60 677-738 43-110 (257)
75 1ni7_A ER75, hypothetical prot 27.4 43 0.0015 30.6 3.5 33 536-569 78-110 (155)
76 3g0m_A Cysteine desulfuration 23.2 42 0.0014 30.2 2.5 33 535-568 70-102 (141)
77 1yew_A Particulate methane mon 21.4 2.4E+02 0.008 29.3 7.9 54 676-732 264-337 (382)
78 3rfr_A PMOB; membrane, oxidore 20.3 5.2E+02 0.018 27.1 10.2 52 676-732 298-369 (419)
79 3hrz_B Cobra venom factor; ser 20.2 2.2E+02 0.0074 28.0 7.5 64 656-731 85-154 (252)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=4.6e-126 Score=1100.72 Aligned_cols=634 Identities=42% Similarity=0.694 Sum_probs=576.8
Q ss_pred CCCCCcccCCcCCCCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeecc
Q 004301 107 TTRSPEFLGLDKSANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFA 186 (762)
Q Consensus 107 ~~~s~~~~g~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~ 186 (762)
++++|+|+|+.+..++|..+.+|+||+|||||||||++||+|.+.++.++|.+|+|.|+.|.+|+...||+|++++++|.
T Consensus 1 Tt~s~~flgl~~~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~ 80 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFN 80 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECC
T ss_pred CCCChHHcCCCCchhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEecc
Confidence 57899999998778899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCCCCHHHHHHHH
Q 004301 187 RGYEATLGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGGCFSSDILAAI 266 (762)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai 266 (762)
.+++... ++...+..+++|.+||||||||||||+.+++.+.+|++.|.+.||||+|+|++||+|+..|+..+++++||
T Consensus 81 ~~~~~~~--~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~Ai 158 (649)
T 3i6s_A 81 KGILAND--PTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLIAAM 158 (649)
T ss_dssp HHHHHHC--TTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHHHHHHH
T ss_pred Ccccccc--cccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHHHHHHH
Confidence 8765433 23345566789999999999999999999888999999999999999999999999998889999999999
Q ss_pred HHHHhCCCcEEEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCCCccCCCCceEEecCCCCCCccceeEEc
Q 004301 267 EQAIDDNVNVLSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSYSLSNVAPWITTVGAGTLDRDFPAFVSL 346 (762)
Q Consensus 267 ~~a~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~ 346 (762)
+||+++|+||||||||....+++.+++..++++|.++||+||+||||+|+...++++.+||+|+|||++.||.|+..+.+
T Consensus 159 ~~A~~~gvdVIn~SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~l 238 (649)
T 3i6s_A 159 DQAVADGVDMISISYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTL 238 (649)
T ss_dssp HHHHHTTCSEEEECCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEE
T ss_pred HHHHHcCCCEEEeCCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEe
Confidence 99999999999999999777778899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCcccc--CCcEEEEeCCCchhhhHHHHHHHcCceEE
Q 004301 347 GNGQNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKV--AGKIVMCDRGVNARVQKGAVVKAAGGLGM 424 (762)
Q Consensus 347 ~~g~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~--~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~ 424 (762)
++++++.|.++|+.... ...+|+++.. ....|.+..+++.++ +||||+|.|+.+.+.+|..+++++|+.|+
T Consensus 239 gng~~~~g~sl~~~~~~-~~~~plv~~~------~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~ 311 (649)
T 3i6s_A 239 GNGLKIRGWSLFPARAF-VRDSPVIYNK------TLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAI 311 (649)
T ss_dssp TTSCEEEEECCCSSCBC-EEEEEEECCT------TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEE
T ss_pred CCCcEEeeeecccCccc-CcceeeEecc------cccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcCceEE
Confidence 99999999999987653 6789999975 356899888888877 99999999999999999999999999999
Q ss_pred EEeecCCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCc
Q 004301 425 VLANTESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPD 504 (762)
Q Consensus 425 i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPD 504 (762)
|++|+. .....+.+.+|+++++..+++.|++|++++.+++++|.+..+..+..+.+.+++||||||+.+.+++||||
T Consensus 312 i~~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPD 388 (649)
T 3i6s_A 312 FISEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPD 388 (649)
T ss_dssp EECCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCC
T ss_pred EEecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCCe
Confidence 999986 44556788999999999999999999999999999999999999888999999999999999888999999
Q ss_pred EEecCCcEEecccCCCCCCCCCCCC-cccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccccCCcc
Q 004301 505 MIAPGVNILAGWSGAVGPTGLATDS-RRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAYVSYKNGQK 583 (762)
Q Consensus 505 I~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g~~ 583 (762)
|+|||++|+++|+....+.....+. +...|..+||||||||||||+||||||+||+|+|++||++||+||+++++.+.+
T Consensus 389 I~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~ 468 (649)
T 3i6s_A 389 ILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKP 468 (649)
T ss_dssp EEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSB
T ss_pred EEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCc
Confidence 9999999999999865544433332 346899999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCcCccccCCCCeeecCCcchhhhhccccCCCccccccccccccc--cCCCcCCCCCCccCCc
Q 004301 584 LQDIATGKASTPFDHGAGHVNPVSALNPGLVYDLTVDDYLGFLCALNYTASQINSLARRKFT--CDASKRYSLADFNYPS 661 (762)
Q Consensus 584 ~~~~~~~~~~~~~~~G~G~vd~~~A~~~~lv~d~~~~~y~~~~~~~~~~~~~~~~~~~~~~~--c~~~~~~~~~~ln~ps 661 (762)
+.+...+.+++++.||+|+||+.+|++||||||++.+||++|||++||+.++|+.|++...+ |+. ...+|||||
T Consensus 469 i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~----~~~~lNyPs 544 (649)
T 3i6s_A 469 IKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN----PSADLNYPS 544 (649)
T ss_dssp CEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC----CCCCCCCSS
T ss_pred ccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC----chhhcCCCc
Confidence 98876678899999999999999999999999999999999999999999999999988777 974 567999999
Q ss_pred eeeec-cccccCCCcce--EEEEEEEEecCC-CceEEEEEeecCCCCeEEEEEcCeEEEeecCeeeEEEEEEEEecCCCC
Q 004301 662 FAVNI-ETAQSSSGSSV--LKYTRSLTNVGP-PGTYKVFITSSTGPGVKISVEPATLSFTQANEKKSYTVTFTVSSMPSN 737 (762)
Q Consensus 662 ~~~~~-~~~~~~~~~~~--~~~~rtv~n~~~-~~~y~~~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~ 737 (762)
|++.+ +. ..... ++|+|||||||+ .++|+++++. |+|++|+|+|.+|+|++.+|+++|+|||+......+
T Consensus 545 ~~~~~~~~----~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~--p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~ 618 (649)
T 3i6s_A 545 FIALYSIE----GNFTLLEQKFKRTVTNVGKGAATYKAKLKA--PKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQ 618 (649)
T ss_dssp EEEEECCS----SCCCCEEEEEEEEEEECC--CEEEEEEEEC--CTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---
T ss_pred EEeecccC----CCCccceEEEEEEEEEeCCCCcEEEEEEec--CCCCEEEEECCEEEEecCCCEEEEEEEEEecccCCC
Confidence 99987 32 20012 899999999999 9999999999 999999999999999889999999999998766667
Q ss_pred CeEEEEEEEEc--CceEEEeEEEEEeC
Q 004301 738 TNSFAHLEWSD--GKYIVGSPIAISWN 762 (762)
Q Consensus 738 ~~~~G~i~~~~--~~~~v~~P~~v~~~ 762 (762)
.|.||+|+|+| ++|.||+||+|++.
T Consensus 619 ~~~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 619 SRNVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp CCCEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred ceEEEEEEEEcCCCCeEEEEeEEEEEc
Confidence 79999999998 99999999999873
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=8.2e-113 Score=993.46 Aligned_cols=613 Identities=43% Similarity=0.744 Sum_probs=513.0
Q ss_pred CCCCCcccCCcCCCCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeecc
Q 004301 107 TTRSPEFLGLDKSANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFA 186 (762)
Q Consensus 107 ~~~s~~~~g~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~ 186 (762)
++++|+|+||+ ..+|.+..+|+||+|||||||||++||+|+++++.+++.+|+|.|+.+.+|. ||+|++|+++|.
T Consensus 1 tt~s~~flGl~--~~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~---~n~k~ig~~~~~ 75 (621)
T 3vta_A 1 TTRSWDFLGFP--LTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFR---CNRKIIGARSYH 75 (621)
T ss_dssp CCSHHHHTTCC--TTCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCC---CCSSEEEEEECC
T ss_pred CCCChhHcCCC--ccccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcc---cCcceeeeeecc
Confidence 57899999996 4689899999999999999999999999999999999999999999998874 999999999998
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCCCCHHHHHHHH
Q 004301 187 RGYEATLGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGGCFSSDILAAI 266 (762)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai 266 (762)
.+.... ..+..+++|++||||||||||||+.+.+.+.+|++.|.++||||+|+|++||+|++.||..+++++||
T Consensus 76 ~~~~~~------~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di~~a~ 149 (621)
T 3vta_A 76 IGRPIS------PGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAY 149 (621)
T ss_dssp CSSSCC------TTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHHHHHH
T ss_pred cCCccC------CCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHHHHHH
Confidence 775432 23445789999999999999999998888888888899999999999999999999999999999999
Q ss_pred HHHHhCCCcEEEEccCCCC-CCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCCCccCCCCceEEecCCCCCCccceeEE
Q 004301 267 EQAIDDNVNVLSMSLGGGT-SDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSYSLSNVAPWITTVGAGTLDRDFPAFVS 345 (762)
Q Consensus 267 ~~a~~~g~dVIn~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~ 345 (762)
++|+++|+||||||||+.. .....+++++++++|.++||+||+||||+|+...++++.+||+++|++++.++.|...+.
T Consensus 150 ~~a~~~g~dVin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~ 229 (621)
T 3vta_A 150 DDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQ 229 (621)
T ss_dssp HHHHHHTCSEEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEE
T ss_pred HHHHHhCCCEEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEE
Confidence 9999999999999999865 455678899999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEeEeeecCCCCCCceeeEEEccCCCC----CCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCc
Q 004301 346 LGNGQNYSGVSLYKGDGLPGKLLPFVYAGNASN----ATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGG 421 (762)
Q Consensus 346 ~~~g~~~~g~s~~~~~~~~~~~~p~v~~~~~~~----~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga 421 (762)
++++..+.+.+++... ...+++++...... ......|.+..+++.+++|||++|.++. ..+..+....|+
T Consensus 230 ~~~~~~~~~~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~~---~~~~~~~~~~Ga 303 (621)
T 3vta_A 230 IGNGQSFQGVSINTFD---NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASF---GPHEFFKSLDGA 303 (621)
T ss_dssp ETTSCEEEEBCCCCSC---CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSCC---CHHHHHHHHTTC
T ss_pred eccCceeeeeecccCC---CcccccccccccccccccccccccccccccccccccceEEEEecCC---ChhHHhhhhcce
Confidence 9999999888876533 45677777665432 2235678899999999999999998763 356677788999
Q ss_pred eEEEEeecCCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCC
Q 004301 422 LGMVLANTESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELL 501 (762)
Q Consensus 422 ~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~l 501 (762)
.+++++++... ..+.+.+|...++..++..++.|+..+..+.+.+....+ ......+.++.||||||+...++++
T Consensus 304 ~gvi~~~~~~~----~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~-~~~~~~~~va~FSSrGP~~~~~~il 378 (621)
T 3vta_A 304 AGVLMTSNTRD----YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTT-ILNASAPVVVSFSSRGPNRATKDVI 378 (621)
T ss_dssp SEEEEECSCCS----SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEE-EECTTCCCBCTTSCCCSCTTCTTSC
T ss_pred eEEEEEecCCC----cccccccceEEECHHHHHHHHHHHhccCCcceEEecceE-eccCCCCceeeecCCCCCCCCCCee
Confidence 99999987543 235678999999999999999999998888887754443 3446788999999999998778999
Q ss_pred CCcEEecCCcEEecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccccCC
Q 004301 502 KPDMIAPGVNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAYVSYKNG 581 (762)
Q Consensus 502 KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g 581 (762)
||||+|||++|+|+|+....... ......|..+||||||||||||+||||||+||+|+|++||++||+||++++..
T Consensus 379 KPDI~APG~~Ilsa~~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~- 454 (621)
T 3vta_A 379 KPDISGPGVEILAAWPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNAR- 454 (621)
T ss_dssp SCCEEEECSSEEEECCSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTT-
T ss_pred ccccccCCcceEeecCccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCccccc-
Confidence 99999999999999987543222 22345899999999999999999999999999999999999999999988654
Q ss_pred cccccccCCCCCCCCCCCCCCcCccccCCCCeeecCCcchhhhhccccCCCccccccccccccccCCCcCCCCCCccCCc
Q 004301 582 QKLQDIATGKASTPFDHGAGHVNPVSALNPGLVYDLTVDDYLGFLCALNYTASQINSLARRKFTCDASKRYSLADFNYPS 661 (762)
Q Consensus 582 ~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~lv~d~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ln~ps 661 (762)
..+..+++||+|+||+.+|++||||||+..+||+.|||++||+..+++.+++....|.........+|||||
T Consensus 455 --------~~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lN~pS 526 (621)
T 3vta_A 455 --------FNPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPS 526 (621)
T ss_dssp --------TCTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC-----------------------------CGGGSCCSS
T ss_pred --------CCCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCCCCcCccccccccc
Confidence 345677899999999999999999999999999999999999999999999988899876656778999999
Q ss_pred eeeeccccccCCCcceEEEEEEEEecCC-CceEEEEEeecCCCCeEEEEEcCeEEEeecCeeeEEEEEEEEecCCCCCeE
Q 004301 662 FAVNIETAQSSSGSSVLKYTRSLTNVGP-PGTYKVFITSSTGPGVKISVEPATLSFTQANEKKSYTVTFTVSSMPSNTNS 740 (762)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~rtv~n~~~-~~~y~~~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~ 740 (762)
|++.... ....+++|+||||||+. ..+|+++++. |+|++|+|+|.+|+|++.+|+++|+|||+.. .++.++
T Consensus 527 ~~v~~~~----~~~~~~t~~rtvtnvg~~~~ty~~~v~~--p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~--~~~~~~ 598 (621)
T 3vta_A 527 FGLSVSP----SQTFNQYFNRTLTSVAPQASTYRAMISA--PQGLTISVNPNVLSFNGLGDRKSFTLTVRGS--IKGFVV 598 (621)
T ss_dssp EEEECCS----SCCEEEEEEEEEEECSSSCEEEEEEEEC--CSSEEEEEESSEEEECSTTCEEEEEEEEEEC--CCSSEE
T ss_pred EEEEccC----CCceEEEEEEEEEccCCCCeEEEEEEEC--CCCcEEEEecCEEEEcCCCcEEEEEEEEEec--CCCceE
Confidence 9987542 22368999999999999 9999999999 9999999999999999889999999999764 678899
Q ss_pred EEEEEEEcCceEEEeEEEEEe
Q 004301 741 FAHLEWSDGKYIVGSPIAISW 761 (762)
Q Consensus 741 ~G~i~~~~~~~~v~~P~~v~~ 761 (762)
||+|+|+|++|.||+||+|+.
T Consensus 599 ~g~l~w~d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 599 SASLVWSDGVHYVRSPITITS 619 (621)
T ss_dssp EEEEEEECSSCCCEEEEEEEC
T ss_pred EEEEEEEcCCEEEEeCEEEEE
Confidence 999999999999999999984
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=2.1e-83 Score=775.44 Aligned_cols=536 Identities=24% Similarity=0.317 Sum_probs=426.9
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCC----------CCCCCCceeeeeeeccccc
Q 004301 120 ANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNF----------NASNCNRKLIGARYFARGY 189 (762)
Q Consensus 120 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f----------~~~~~n~kiig~~~~~~~~ 189 (762)
..+|..+++|+||+|||||||||++||+|.+. ..|++.|..+..| ...+||+|++++++|..+.
T Consensus 7 ~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~~ 80 (926)
T 1xf1_A 7 KTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKDG 80 (926)
T ss_dssp HHHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCCS
T ss_pred HHHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceeeccccCC
Confidence 45899999999999999999999999999853 5677776543222 2347999999999987542
Q ss_pred cccCCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC--CCHHHHHHHHH
Q 004301 190 EATLGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG--CFSSDILAAIE 267 (762)
Q Consensus 190 ~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~ 267 (762)
...|..||||||||||||+...+.+. .+.+.||||+|+|++||+|++.+ +..+++++||+
T Consensus 81 --------------~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai~ 142 (926)
T 1xf1_A 81 --------------KTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAIR 142 (926)
T ss_dssp --------------CCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHHH
T ss_pred --------------CCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHHH
Confidence 12288999999999999987554322 24468999999999999998876 55678999999
Q ss_pred HHHhCCCcEEEEccCCCC--CCCcccHHHHHHHHHHhcCCEEEEecCCCCCCC-------------C--CccCCCCceEE
Q 004301 268 QAIDDNVNVLSMSLGGGT--SDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSS-------------Y--SLSNVAPWITT 330 (762)
Q Consensus 268 ~a~~~g~dVIn~SlG~~~--~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-------------~--~~~~~~p~vit 330 (762)
||+++|+||||||||+.. ...+.+.+..++++|.++||+||+||||+|+.. . ..++.+||+|+
T Consensus 143 ~Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vit 222 (926)
T 1xf1_A 143 DAINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLT 222 (926)
T ss_dssp HHHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEE
T ss_pred HHHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEE
Confidence 999999999999999864 344567788899999999999999999999632 1 23345899999
Q ss_pred ecCCCCCCccceeEEc-CCCcEEEeEeeecCCCC-CCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCch
Q 004301 331 VGAGTLDRDFPAFVSL-GNGQNYSGVSLYKGDGL-PGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNA 408 (762)
Q Consensus 331 VgA~~~~~~~~~~~~~-~~g~~~~g~s~~~~~~~-~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~ 408 (762)
|||++.++.+...+.+ +++....+.+++...++ ....+|+++... .|.+..+ .+++||||+|.|+.|.
T Consensus 223 VgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~--------g~~~~~~--~~v~Gkivl~~rg~~~ 292 (926)
T 1xf1_A 223 VASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR--------GTKEDDF--KDVKGKIALIERGDID 292 (926)
T ss_dssp EEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT--------SCSTTTT--TTCTTSEEEEECCSSC
T ss_pred EeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC--------CCCccch--hhcCCeEEEEECCCCC
Confidence 9999999999888887 66655556665543333 356799999754 3766555 6899999999999999
Q ss_pred hhhHHHHHHHcCceEEEEeecCCCCcc-ccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEeccee--ecCcCCCee
Q 004301 409 RVQKGAVVKAAGGLGMVLANTESNGEE-LVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTK--VGVEPSPVV 485 (762)
Q Consensus 409 ~~~~~~~~~~~Ga~g~i~~n~~~~~~~-~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~ 485 (762)
+.+|..+++++||.|+|++|+...... ......++|+++++..+++.|++ .+..++.+..+. ......+.+
T Consensus 293 ~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~------~~~~ti~~~~~~~~~~~~~~~~~ 366 (926)
T 1xf1_A 293 FKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD------NPQKTITFNATPKVLPTASGTKL 366 (926)
T ss_dssp HHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH------CSSCEEEECSSCEEEECSSCSBC
T ss_pred HHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh------CCceEEEecccceecccCCccee
Confidence 999999999999999999998654322 23446789999999999998874 345566666553 455667899
Q ss_pred ecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHH----hhCCCC
Q 004301 486 AAFSSRGPNSITPELLKPDMIAPGVNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLK----AAHPEW 561 (762)
Q Consensus 486 a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~----~~~p~~ 561 (762)
+.||||||+.+ +++||||+|||++|+++++++ .|..+||||||||||||+||||+ +.||+|
T Consensus 367 a~FSSrGp~~~--~~lKPDI~APG~~I~sa~~~~-------------~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~ 431 (926)
T 1xf1_A 367 SRFSSWGLTAD--GNIKPDIAAPGQDILSSVANN-------------KYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDM 431 (926)
T ss_dssp CTTSCCCBCTT--SCBSCCEEEECCCEEESSSCS-------------SSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSS
T ss_pred ccccCCCCCCC--CccCceEECCCCCEEeeccCC-------------cceecCccchhHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999965 899999999999999999864 79999999999999999999995 569999
Q ss_pred CHHH----HHHHHHhcccccccCCcccccccCCCCCCCCCCCCCCcCccccCCCCeeecCCcchhhhhccccCCCccccc
Q 004301 562 SPAA----IRSALMTTAYVSYKNGQKLQDIATGKASTPFDHGAGHVNPVSALNPGLVYDLTVDDYLGFLCALNYTASQIN 637 (762)
Q Consensus 562 sp~~----ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~lv~d~~~~~y~~~~~~~~~~~~~~~ 637 (762)
+|+| ||++||+||+++...+. ...+++++||+|+||+.+|++|.+ |||..++...
T Consensus 432 sp~~~~~~Iks~L~~TA~~~~~~~~-------~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~--- 490 (926)
T 1xf1_A 432 TPSERLDLAKKVLMSSATALYDEDE-------KAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSS--- 490 (926)
T ss_dssp HHHHHHHHHHHHHHHHSBCCEEGGG-------TEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCS---
T ss_pred CHHHHHHHHHHHHHhcCCCcccCCC-------CccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcc---
Confidence 9997 99999999998754321 335677899999999999999854 6787654321
Q ss_pred cccccccccCCCcCCCCCCccCCceeeeccccccCCCcceEEEEEEEEecCC-C--ceEEEEEeecCCCCeEEEEEcCeE
Q 004301 638 SLARRKFTCDASKRYSLADFNYPSFAVNIETAQSSSGSSVLKYTRSLTNVGP-P--GTYKVFITSSTGPGVKISVEPATL 714 (762)
Q Consensus 638 ~~~~~~~~c~~~~~~~~~~ln~ps~~~~~~~~~~~~~~~~~~~~rtv~n~~~-~--~~y~~~~~~~~~~~~~v~v~p~~~ 714 (762)
+|.+... . .+.+++|||||+|+ . .+|++++....|++..++|+|..|
T Consensus 491 -----------------------~i~l~~~-----~--~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l 540 (926)
T 1xf1_A 491 -----------------------KVHLNNV-----S--DKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVL 540 (926)
T ss_dssp -----------------------CEEEEEE-----C--SEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred -----------------------eeecccc-----C--ccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEecccee
Confidence 2333322 1 47899999999997 4 567877765446788999988766
Q ss_pred EEe-------ecCeeeEEEEEEEEec--------CCCCCeEEEEEEEE--cCceE-EEeEEEEEe
Q 004301 715 SFT-------QANEKKSYTVTFTVSS--------MPSNTNSFAHLEWS--DGKYI-VGSPIAISW 761 (762)
Q Consensus 715 ~~~-------~~~~~~~~~vt~~~~~--------~~~~~~~~G~i~~~--~~~~~-v~~P~~v~~ 761 (762)
.|. ++|++++|+|||++.. ++++.++||+|+|+ ++.|. ||+||++..
T Consensus 541 ~~~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~ 605 (926)
T 1xf1_A 541 YETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFR 605 (926)
T ss_dssp EECCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEE
T ss_pred EeccCCeEEECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEe
Confidence 554 4599999999999851 35667999999999 56664 999999863
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.8e-61 Score=551.59 Aligned_cols=367 Identities=30% Similarity=0.461 Sum_probs=290.9
Q ss_pred CCCCeEEEEeCCCCCCcchhhhHHHHHHhhcccCCCCcEEEEEcceeeEEEEEcCHHHHHHH-----------hcCCCeE
Q 004301 27 DQRATYIIHMAKSEMPASFEHHTHWYESSLKSVSDSAEILYTYDNVIHGFSTQLTREEAESL-----------EQRPGIL 95 (762)
Q Consensus 27 ~~~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~y~~~~~g~s~~~~~~~~~~L-----------~~~p~V~ 95 (762)
.+...|||+|++.... +...+.+++. +.+++++|. .++||+++++++++++| +++|+|+
T Consensus 33 ~~~~~~iV~~~~~~~~-------~~~~~~~~~~--g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~ 102 (539)
T 3afg_A 33 DQEVSTIIMFDNQADK-------EKAVEILDFL--GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQ 102 (539)
T ss_dssp TCEEEEEEEESSHHHH-------HHHHHHHHHH--TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEE
T ss_pred cCceEEEEEECCCCCH-------HHHHHHHHhc--CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCee
Confidence 3456799999975421 1122334444 578999997 79999999999999999 8899999
Q ss_pred EEEeCceeccCCCCC--CcccCCcCCCCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCC
Q 004301 96 SVLPELKYELHTTRS--PEFLGLDKSANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNAS 173 (762)
Q Consensus 96 ~v~~~~~~~~~~~~s--~~~~g~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~ 173 (762)
+|++++.+++..... ...+.......+|..+++|+||+|||||||||++||+|.+
T Consensus 103 ~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~----------------------- 159 (539)
T 3afg_A 103 FIQEDYVVKVAVETEGLDESAAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQG----------------------- 159 (539)
T ss_dssp EEEECCEEECC-----------CCBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTT-----------------------
T ss_pred EEEecccccccCccccCCccccccCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhC-----------------------
Confidence 999999988753221 1112222346789999999999999999999999999964
Q ss_pred CCCceeeeeeeccccccccCCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEe
Q 004301 174 NCNRKLIGARYFARGYEATLGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCW 253 (762)
Q Consensus 174 ~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~ 253 (762)
++++.++|..+. ..+.|++||||||||||||+.... .|.+.||||+|+|+++|+++
T Consensus 160 ----~i~~~~d~~~~~-------------~~~~D~~gHGThVAgiiag~~~~~-------~g~~~GvAp~A~l~~~kv~~ 215 (539)
T 3afg_A 160 ----KVIGWVDFVNGK-------------TTPYDDNGHGTHVASIAAGTGAAS-------NGKYKGMAPGAKLVGIKVLN 215 (539)
T ss_dssp ----TEEEEEETTTCC-------------SSCCBSSSHHHHHHHHHHCCCGGG-------TTTTCCSCTTCEEEEEECSC
T ss_pred ----CEeeeEECCCCC-------------CCCCCCCCCHHHHHHHHhCcCccC-------CCCEEEECCCCEEEEEEeec
Confidence 355666665431 246788999999999999975321 23358999999999999999
Q ss_pred cCC-CCHHHHHHHHHHHHhC----CCcEEEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCC--CccCCCC
Q 004301 254 VGG-CFSSDILAAIEQAIDD----NVNVLSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSY--SLSNVAP 326 (762)
Q Consensus 254 ~~g-~~~~~i~~ai~~a~~~----g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~--~~~~~~p 326 (762)
+.| ++.+++++||+||+++ |++|||||||........+.+..++.++.++|++||+||||+|+... ..++..+
T Consensus 216 ~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~ 295 (539)
T 3afg_A 216 GQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAAS 295 (539)
T ss_dssp TTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCSCCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCS
T ss_pred CCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCCCCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCC
Confidence 877 7889999999999986 89999999998765455678888999999999999999999998644 4567889
Q ss_pred ceEEecCCCCCCccceeEEcCCCcEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCC
Q 004301 327 WITTVGAGTLDRDFPAFVSLGNGQNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGV 406 (762)
Q Consensus 327 ~vitVgA~~~~~~~~~~~~~~~g~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~ 406 (762)
++|+|||++.
T Consensus 296 ~vitVgA~~~---------------------------------------------------------------------- 305 (539)
T 3afg_A 296 KVITVGAVDK---------------------------------------------------------------------- 305 (539)
T ss_dssp SSEEEEEECT----------------------------------------------------------------------
T ss_pred ceEEEeeecC----------------------------------------------------------------------
Confidence 9999998421
Q ss_pred chhhhHHHHHHHcCceEEEEeecCCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeee
Q 004301 407 NARVQKGAVVKAAGGLGMVLANTESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVA 486 (762)
Q Consensus 407 ~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a 486 (762)
.+.++
T Consensus 306 ---------------------------------------------------------------------------~~~~a 310 (539)
T 3afg_A 306 ---------------------------------------------------------------------------YDVIT 310 (539)
T ss_dssp ---------------------------------------------------------------------------TSCBC
T ss_pred ---------------------------------------------------------------------------Ccccc
Confidence 12678
Q ss_pred cccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHH
Q 004301 487 AFSSRGPNSITPELLKPDMIAPGVNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAI 566 (762)
Q Consensus 487 ~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~i 566 (762)
+||||||+.+ +++||||+|||++|+++++...... +.....|..++|||||||||||++|||+|++|+|+|++|
T Consensus 311 ~fSs~Gp~~~--~~~kpdi~APG~~I~s~~~~~~~~~----~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~v 384 (539)
T 3afg_A 311 DFSSRGPTAD--NRLKPEVVAPGNWIIAARASGTSMG----QPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPDKV 384 (539)
T ss_dssp SSSCCCCCTT--CBCCCSEEEECSSEEEECCTTCCCS----EECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred cccCCCCCCC--CCCcccEecCcCCEEeeccCCCCCC----CCCcccccccCchHHHHHHHHHHHHHHHHHCCCCCHHHH
Confidence 9999999986 8999999999999999986532111 111136999999999999999999999999999999999
Q ss_pred HHHHHhcccccccCCcccccccCCCCCCCCCCCCCCcCccccCCCC
Q 004301 567 RSALMTTAYVSYKNGQKLQDIATGKASTPFDHGAGHVNPVSALNPG 612 (762)
Q Consensus 567 k~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~ 612 (762)
|++|++||+++...+ .+++.||+|+||+.+|++..
T Consensus 385 k~~L~~tA~~~~~~~-----------~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 385 KTALIETADIVKPDE-----------IADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp HHHHHHHSBCSSGGG-----------CSBTTTBTCBCCHHHHHTGG
T ss_pred HHHHHhhCccCCCCC-----------CCccCccCCccCHHHHhhhc
Confidence 999999999875221 24568999999999999854
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=2e-59 Score=518.13 Aligned_cols=342 Identities=28% Similarity=0.383 Sum_probs=277.4
Q ss_pred CCeEEEEeCCCCCCcchhhhHHHHHHhhcccCCCCcEEEEEcceeeEEEEEcCHHHHHHHhcCCCeEEEEeCceeccCCC
Q 004301 29 RATYIIHMAKSEMPASFEHHTHWYESSLKSVSDSAEILYTYDNVIHGFSTQLTREEAESLEQRPGILSVLPELKYELHTT 108 (762)
Q Consensus 29 ~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~y~~~~~g~s~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~ 108 (762)
+.+|||+|+++... ++++++. +.+++++|. .+++|+++++++++++|+++|+|++|++++.+++...
T Consensus 2 ~~~~iV~~~~~~~~----------~~~~~~~--g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~ 68 (395)
T 2z2z_A 2 TIRVIVSVDKAKFN----------PHEVLGI--GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGK 68 (395)
T ss_dssp EEEEEEEECTTTCC----------HHHHHHT--TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCE
T ss_pred cEEEEEEECCCccH----------HHHHHHc--CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCC
Confidence 46899999987432 2234443 678999998 5999999999999999999999999999999876432
Q ss_pred CC-----------CcccCCcC--CCCCCcCCCCCCC--cEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCC
Q 004301 109 RS-----------PEFLGLDK--SANLFPTSGSASE--VIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNAS 173 (762)
Q Consensus 109 ~s-----------~~~~g~~~--~~~~~~~~~~G~G--v~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~ 173 (762)
.. ...|++.. ...+|..+ +|+| |+|||||||||++||+|.++
T Consensus 69 ~~~~~~~~~~~~~~~~w~~~~i~~~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~~---------------------- 125 (395)
T 2z2z_A 69 PSWLGGGSTQPAQTIPWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN---------------------- 125 (395)
T ss_dssp ECC------CCSCCCCHHHHHTTCGGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGGG----------------------
T ss_pred CCcccccccCccccCCcchhhcCHHHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhhc----------------------
Confidence 11 12455443 35689988 9999 99999999999999999752
Q ss_pred CCCceeeeeeeccccccccCCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEe
Q 004301 174 NCNRKLIGARYFARGYEATLGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCW 253 (762)
Q Consensus 174 ~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~ 253 (762)
++..++|..+... ....++.|.+||||||||||+|.. ++ .| +.||||+|+|+.+|+++
T Consensus 126 -----~~~~~~~~~~~~~--------~~~~~~~d~~gHGT~vAgiia~~~-n~---~g-----~~GvAp~a~l~~~kv~~ 183 (395)
T 2z2z_A 126 -----IAWCVSTLRGKVS--------TKLRDCADQNGHGTHVIGTIAALN-ND---IG-----VVGVAPGVQIYSVRVLD 183 (395)
T ss_dssp -----EEEEEECGGGCCB--------CCHHHHBCSSSHHHHHHHHHHCCC-SS---SS-----CCCSSTTCEEEEEECSC
T ss_pred -----cccCccccCCccc--------CCCCCCCCCCCCHHHHHHHHHeec-CC---Cc-----eEEECCCCEEEEEEEec
Confidence 3334444433100 000124678999999999999973 21 12 37999999999999998
Q ss_pred cCC-CCHHHHHHHHHHHHhC--------------------CCcEEEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecC
Q 004301 254 VGG-CFSSDILAAIEQAIDD--------------------NVNVLSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAG 312 (762)
Q Consensus 254 ~~g-~~~~~i~~ai~~a~~~--------------------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAG 312 (762)
+.| ++.+++++||+||+++ +++|||||||.... ...+..++.++.++|++||+|||
T Consensus 184 ~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AAG 260 (395)
T 2z2z_A 184 ARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD---DSYLYDMIIQAYNAGIVIVAASG 260 (395)
T ss_dssp TTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCCccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCCC---CHHHHHHHHHHHHCCCEEEEECC
Confidence 877 7888999999999988 99999999998542 35667777789999999999999
Q ss_pred CCCCCCCCccCCCCceEEecCCCCCCccceeEEcCCCcEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCc
Q 004301 313 NAGPSSYSLSNVAPWITTVGAGTLDRDFPAFVSLGNGQNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIP 392 (762)
Q Consensus 313 N~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~ 392 (762)
|+|.....+++..|++|+|||++.
T Consensus 261 N~g~~~~~~Pa~~~~vi~Vga~~~-------------------------------------------------------- 284 (395)
T 2z2z_A 261 NEGAPSPSYPAAYPEVIAVGAIDS-------------------------------------------------------- 284 (395)
T ss_dssp SSCCSSCCBTTTSTTEEEEEEECT--------------------------------------------------------
T ss_pred CCCCCCCCCccCCCCEEEEEEecC--------------------------------------------------------
Confidence 999887788899999999998431
Q ss_pred cccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeecCCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEe
Q 004301 393 EKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANTESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILF 472 (762)
Q Consensus 393 ~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~ 472 (762)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeecCcCCCeeecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHH
Q 004301 473 EGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIAPGVNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAA 552 (762)
Q Consensus 473 ~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aA 552 (762)
.+.+++||++|| +|+|||++|+++++.+ .|..++|||||||||||++|
T Consensus 285 ---------~~~~a~fS~~G~----------~v~APG~~i~s~~~~~-------------~y~~~sGTS~AaP~VaG~aA 332 (395)
T 2z2z_A 285 ---------NDNIASFSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVA 332 (395)
T ss_dssp ---------TSCBCTTSCSSC----------SEEEECSSEEEEETTT-------------EEEEEESHHHHHHHHHHHHH
T ss_pred ---------CCCCCcccCCCC----------CEEeCCCCeeeecCCC-------------ceEecCCHHHHHHHHHHHHH
Confidence 126789999998 6799999999999864 89999999999999999999
Q ss_pred HHHhhCC-------------CCCHHHHHHHHHhcccccccCCcccccccCCCCCCCCCCCCCCcCccccCCC
Q 004301 553 LLKAAHP-------------EWSPAAIRSALMTTAYVSYKNGQKLQDIATGKASTPFDHGAGHVNPVSALNP 611 (762)
Q Consensus 553 Ll~~~~p-------------~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 611 (762)
||+|++| .|++.+||++|++||+++.. +..+..||||+||+.+|++.
T Consensus 333 ll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~------------~g~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 333 LIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGP------------TGWDADYGYGVVRAALAVQA 392 (395)
T ss_dssp HHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSS------------SSSBTTTBTCBCCHHHHHHH
T ss_pred HHHHhCccccccccccccccCCCHHHHHHHHHhhccccCC------------CCCCCCccCceeCHHHHHHH
Confidence 9999999 99999999999999998742 23456899999999999874
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=2e-57 Score=514.93 Aligned_cols=356 Identities=19% Similarity=0.233 Sum_probs=277.4
Q ss_pred CCCeEEEEeCCCCCCcchhhhHHHHHHhhcccCCCCcEEEEEcceeeEEEEEcCHHHHHHHhc-CCCeEEEEeCceeccC
Q 004301 28 QRATYIIHMAKSEMPASFEHHTHWYESSLKSVSDSAEILYTYDNVIHGFSTQLTREEAESLEQ-RPGILSVLPELKYELH 106 (762)
Q Consensus 28 ~~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~y~~~~~g~s~~~~~~~~~~L~~-~p~V~~v~~~~~~~~~ 106 (762)
+++.|||++++.. .+.+.+++. +.+++++|. .+++|+++++++++++|++ +|+|++|++++.+++.
T Consensus 43 ~~~~yiv~~~~~~----------~~~~~~~~~--g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~ 109 (471)
T 3t41_A 43 EELYYSVEYKNTA----------TFNKLVKKK--SLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCIT 109 (471)
T ss_dssp CCEEEEEEESCHH----------HHHHHHHHH--TCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBC
T ss_pred CceEEEEEcCCHH----------HHHHHHHhC--CCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccc
Confidence 3568999777533 133445544 678889986 5999999999999999999 9999999999988775
Q ss_pred CCCC----------CcccCCcCC---CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCC
Q 004301 107 TTRS----------PEFLGLDKS---ANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNAS 173 (762)
Q Consensus 107 ~~~s----------~~~~g~~~~---~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~ 173 (762)
.... ...|++..+ ..+|..+.+|+||+|||||||||++||+|.++- |.+
T Consensus 110 ~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~~~G~gv~VaViDtGid~~Hp~~~~~~-------~~~----------- 171 (471)
T 3t41_A 110 SEKTIDRTSNESLFSRQWDMNKITNNGASYDDLPKHANTKIAIIDTGVMKNHDDLKNNF-------STD----------- 171 (471)
T ss_dssp CCCCCCC---CCSCCCCHHHHTTTTTTGGGGGCCSSCCCCEEEEESCCCTTCTTTTTTB-------CTT-----------
T ss_pred cccccccCCCCccccccccHhhccCcHHHHhccCCCCCcEEEEEeCCCCCCChhHhcCc-------ccC-----------
Confidence 4322 123444433 358999999999999999999999999998641 111
Q ss_pred CCCceeeeeeeccccccccCCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEe
Q 004301 174 NCNRKLIGARYFARGYEATLGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCW 253 (762)
Q Consensus 174 ~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~ 253 (762)
.+.|..+..+.....+...+...+.|..||||||||||||+.. +.||||+|+|+++|+++
T Consensus 172 --------~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiiaa~g~------------~~GvAp~a~l~~~kv~~ 231 (471)
T 3t41_A 172 --------SKNLVPLNGFRGTEPEETGDVHDVNDRKGHGTMVSGQTSANGK------------LIGVAPNNKFTMYRVFG 231 (471)
T ss_dssp --------CEECCCTTCGGGCCTTCCCCTTCCCCSSSHHHHHHHHHHCBSS------------SBCSSTTSCEEEEECCS
T ss_pred --------CcccccCCCccCCCcccCCCCCCCcCCCCccchhhheeecCCc------------eeEECCCCeEEEEEecc
Confidence 1112111111111111112233578899999999999998631 48999999999999998
Q ss_pred cCCCCHHHHHHHHHHHHhCCCcEEEEccCCCCC-------------CCcccHHHHHHHHHHhcCCEEEEecCCCCCCCCC
Q 004301 254 VGGCFSSDILAAIEQAIDDNVNVLSMSLGGGTS-------------DYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSYS 320 (762)
Q Consensus 254 ~~g~~~~~i~~ai~~a~~~g~dVIn~SlG~~~~-------------~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~ 320 (762)
+.++..+++++||+||+++|++|||||||.... ....+.+..++..+.++|++||+||||+|.....
T Consensus 232 ~~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~ 311 (471)
T 3t41_A 232 SKKTELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVND 311 (471)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTC
T ss_pred CCCCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCc
Confidence 866889999999999999999999999997320 0223567788889999999999999999986542
Q ss_pred ------------------ccCCCCceEEecCCCCCCccceeEEcCCCcEEEeEeeecCCCCCCceeeEEEccCCCCCCCC
Q 004301 321 ------------------LSNVAPWITTVGAGTLDRDFPAFVSLGNGQNYSGVSLYKGDGLPGKLLPFVYAGNASNATNG 382 (762)
Q Consensus 321 ------------------~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~ 382 (762)
.++.+|++|+|||++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~---------------------------------------------- 345 (471)
T 3t41_A 312 KQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQ---------------------------------------------- 345 (471)
T ss_dssp HHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECT----------------------------------------------
T ss_pred ccccccccccccCCceeeccccCCCeEEEEeeCC----------------------------------------------
Confidence 5677889999988432
Q ss_pred CcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeecCCCCccccccCcccceEEEchhhHHHHHHHHhc
Q 004301 383 NLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANTESNGEELVADAHLLPATAVGQKFGDAIKSYLVS 462 (762)
Q Consensus 383 ~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~ 462 (762)
T Consensus 346 -------------------------------------------------------------------------------- 345 (471)
T 3t41_A 346 -------------------------------------------------------------------------------- 345 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEEecCCc----------------------EEecccCCC
Q 004301 463 DPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIAPGVN----------------------ILAGWSGAV 520 (762)
Q Consensus 463 ~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~----------------------I~sa~~~~~ 520 (762)
.+.+++||++||+. |||+|||++ |+++++.+
T Consensus 346 -------------------~~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~~- 398 (471)
T 3t41_A 346 -------------------KSNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANNG- 398 (471)
T ss_dssp -------------------TSSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTTS-
T ss_pred -------------------CCCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecCCCC-
Confidence 12678999999974 499999987 88888764
Q ss_pred CCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCC-CCCHHHHHHHHHhcccccccCCcccccccCCCCCCCCCCC
Q 004301 521 GPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHP-EWSPAAIRSALMTTAYVSYKNGQKLQDIATGKASTPFDHG 599 (762)
Q Consensus 521 ~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p-~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G 599 (762)
.|..++|||||||||||++|||+|++| .++|++||++|++||.+... .++..||
T Consensus 399 ------------~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~-------------~~~~~~G 453 (471)
T 3t41_A 399 ------------RYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN-------------KPFSRYG 453 (471)
T ss_dssp ------------SEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC-------------CCHHHHT
T ss_pred ------------CEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC-------------CCcCccc
Confidence 799999999999999999999999999 89999999999999997632 3445899
Q ss_pred CCCcCccccCCCC
Q 004301 600 AGHVNPVSALNPG 612 (762)
Q Consensus 600 ~G~vd~~~A~~~~ 612 (762)
||++|+.+|++..
T Consensus 454 ~G~vd~~~Al~~a 466 (471)
T 3t41_A 454 HGELDVYKALNVA 466 (471)
T ss_dssp TCBBCHHHHTTTT
T ss_pred cChhCHHHHHHHH
Confidence 9999999999854
No 7
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=1.6e-59 Score=537.28 Aligned_cols=333 Identities=21% Similarity=0.265 Sum_probs=63.1
Q ss_pred CeEEEEeCCCCCCcchhhhHHHHHHhhcccCCCCcEEEEEcceeeEEEEEcCHHHHHHHhcCCCeEEEEeCceeccCCCC
Q 004301 30 ATYIIHMAKSEMPASFEHHTHWYESSLKSVSDSAEILYTYDNVIHGFSTQLTREEAESLEQRPGILSVLPELKYELHTTR 109 (762)
Q Consensus 30 ~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~y~~~~~g~s~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~ 109 (762)
++|||+||++......+.+.+++.+.+.+.....++++.|.+.|+||+++++++++++|+++|+|++||+++.+...
T Consensus 76 g~YIV~lk~~~~~~~~~~~~~~l~a~~~~~g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~--- 152 (692)
T 2p4e_P 76 GTYVVVLKEETHLSQSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQ--- 152 (692)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC---
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHHhhcccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccC---
Confidence 49999999988765555555666555544433568999999999999999999999999999999999999988652
Q ss_pred CCcccCCcCCC------CCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeee
Q 004301 110 SPEFLGLDKSA------NLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGAR 183 (762)
Q Consensus 110 s~~~~g~~~~~------~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~ 183 (762)
...|++.++. ..|..+.+|+||+|||||||||++||+|.++. .|. +|
T Consensus 153 -~~pWgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~------~~~-------~~------------- 205 (692)
T 2p4e_P 153 -SIPWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRV------MVT-------DF------------- 205 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -CCCcchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCce------Eec-------cc-------------
Confidence 1235665432 36888899999999999999999999998641 010 00
Q ss_pred eccccccccCCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC-CCHHHH
Q 004301 184 YFARGYEATLGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG-CFSSDI 262 (762)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i 262 (762)
++..+. ++ .....++.|.+||||||||||+|+. .||||+|+|+++||+++.| ++.+++
T Consensus 206 ~~~~d~---dg----~~~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~G~g~~s~i 264 (692)
T 2p4e_P 206 ENVPEE---DG----TRFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGT 264 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCC---CC----CcccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCCCCCCHHHH
Confidence 000000 00 0001246789999999999999873 6999999999999998877 788899
Q ss_pred HHHHHHHHhC------CCcEEEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCC-CccCCCCceEEecCCC
Q 004301 263 LAAIEQAIDD------NVNVLSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSY-SLSNVAPWITTVGAGT 335 (762)
Q Consensus 263 ~~ai~~a~~~------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgA~~ 335 (762)
++||+|++++ |++|||||||+..+ ..+..++.++.++|++||+||||+|.+.. ..++..|++|+|||++
T Consensus 265 i~aI~~a~~~~~~~~~g~~VINmSlGg~~s----~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d 340 (692)
T 2p4e_P 265 LIGLEFIRKSQLVQPVGPLVVLLPLAGGYS----RVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATN 340 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhhhhcccCCceEEEecCCCCCc----HHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEc
Confidence 9999999986 89999999997543 34455556889999999999999998764 3478889999999964
Q ss_pred CCCccceeEEcCCCcEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHH
Q 004301 336 LDRDFPAFVSLGNGQNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAV 415 (762)
Q Consensus 336 ~~~~~~~~~~~~~g~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~ 415 (762)
.+...
T Consensus 341 ~~~~~--------------------------------------------------------------------------- 345 (692)
T 2p4e_P 341 AQDQP--------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCc---------------------------------------------------------------------------
Confidence 32210
Q ss_pred HHHcCceEEEEeecCCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCC
Q 004301 416 VKAAGGLGMVLANTESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNS 495 (762)
Q Consensus 416 ~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~ 495 (762)
...-+.||+|||
T Consensus 346 ------------------------------------------------------------------a~~ss~fSn~G~-- 357 (692)
T 2p4e_P 346 ------------------------------------------------------------------VTLGTLGTNFGR-- 357 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------------------cccccccCCCCC--
Confidence 000123899998
Q ss_pred CCCCCCCCcEEecCCcEEecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhccc
Q 004301 496 ITPELLKPDMIAPGVNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAY 575 (762)
Q Consensus 496 ~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~ 575 (762)
||||+|||++|+++++... ..|..++|||||||||||++|||+|++|+|+|++||++|++||.
T Consensus 358 ------~vDI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~ 420 (692)
T 2p4e_P 358 ------CVDLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSA 420 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------ceeEEecCCcEEeeccCCC-----------CceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcc
Confidence 4599999999999988642 27899999999999999999999999999999999999999998
Q ss_pred cc
Q 004301 576 VS 577 (762)
Q Consensus 576 ~~ 577 (762)
+.
T Consensus 421 ~~ 422 (692)
T 2p4e_P 421 KD 422 (692)
T ss_dssp --
T ss_pred cc
Confidence 64
No 8
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=2.6e-55 Score=492.17 Aligned_cols=384 Identities=26% Similarity=0.361 Sum_probs=277.1
Q ss_pred cCCcC--CCCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeeccccccc
Q 004301 114 LGLDK--SANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYEA 191 (762)
Q Consensus 114 ~g~~~--~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~ 191 (762)
|++.+ +..+|..+ |+||+|||||||||++||+|.++ ++..+++...
T Consensus 6 W~l~~i~~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~---------------------------~~~~~~~~~~--- 53 (441)
T 1y9z_A 6 WGQTFVGATVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN---------------------------NVTGTNNSGT--- 53 (441)
T ss_dssp HHHHHTTCSSSCCTT--GGGCEEEEEESCCCTTSTTTTTS---------------------------EEEECCCTTS---
T ss_pred CChhhcChhhhhhcC--CCCcEEEEEcCCCCCCChhHhcC---------------------------cccCcccCCC---
Confidence 55444 35688764 77999999999999999999753 1111111110
Q ss_pred cCCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCc--eEEEEEEEecCC-CCHHHHHHHHHH
Q 004301 192 TLGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRA--RVAAYKVCWVGG-CFSSDILAAIEQ 268 (762)
Q Consensus 192 ~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A--~l~~~kv~~~~g-~~~~~i~~ai~~ 268 (762)
.+...+.|..||||||||||+|..+. .| +.||||+| +|+.+|++++.| ++.+++++||+|
T Consensus 54 --------~~~~~~~d~~gHGT~vAgiia~~~~~----~g-----~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~ 116 (441)
T 1y9z_A 54 --------GNWYQPGNNNAHGTHVAGTIAAIANN----EG-----VVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDT 116 (441)
T ss_dssp --------CCTTCCCSSCCHHHHHHHHHHCCCSS----SB-----CCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHH
T ss_pred --------CCCCCCCCCCCcHHHHHHHHhcccCC----CC-----ceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHH
Confidence 01124678899999999999997522 12 48999995 999999999877 788899999999
Q ss_pred HHhC-CCcEEEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCCCccCCCCceEEecCCCCCCccceeEEcC
Q 004301 269 AIDD-NVNVLSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSYSLSNVAPWITTVGAGTLDRDFPAFVSLG 347 (762)
Q Consensus 269 a~~~-g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~ 347 (762)
|+++ |++|||||||.... ...+..++.+|.++|++||+||||+|.....+++..|++|+|||++.+.....+...+
T Consensus 117 a~~~~g~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g 193 (441)
T 1y9z_A 117 CVNSGGANVVTMSLGGSGS---TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYT 193 (441)
T ss_dssp HHHTTCCSEEEECCCBSCC---BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCC
T ss_pred HHHhcCCcEEEeCCCCCCC---CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCC
Confidence 9999 99999999998542 2456667778999999999999999998888899999999999988765432221111
Q ss_pred -------------------CCc----EEEeEeeecCCCCCCc-eee--EEEccCCC---CCCCCCcccCC--CCCccccC
Q 004301 348 -------------------NGQ----NYSGVSLYKGDGLPGK-LLP--FVYAGNAS---NATNGNLCMMD--TLIPEKVA 396 (762)
Q Consensus 348 -------------------~g~----~~~g~s~~~~~~~~~~-~~p--~v~~~~~~---~~~~~~~c~~~--~~~~~~~~ 396 (762)
++. .+.+.+++....++.. .++ +.+..... .......|... .+++.+++
T Consensus 194 ~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~~~~ 273 (441)
T 1y9z_A 194 DQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGNMA 273 (441)
T ss_dssp TTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECCCCT
T ss_pred CceEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCccccccccccccccchhccccccccccCCCcc
Confidence 111 1222333221110000 000 11111000 01122457543 56778999
Q ss_pred CcEEEEeCCCc-----hhhhHHHHHHHcCceEEEEeecCCC-Cc-----cccccCcccceEEEchhhHHHHHHHHhcCCC
Q 004301 397 GKIVMCDRGVN-----ARVQKGAVVKAAGGLGMVLANTESN-GE-----ELVADAHLLPATAVGQKFGDAIKSYLVSDPK 465 (762)
Q Consensus 397 g~iv~~~~g~~-----~~~~~~~~~~~~Ga~g~i~~n~~~~-~~-----~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~ 465 (762)
|||++|+|+.+ .+.+|..+++++|+.|+|++|+... +. ........+|.+.++..+|+.|+.++.+.
T Consensus 274 gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~-- 351 (441)
T 1y9z_A 274 NKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS-- 351 (441)
T ss_dssp TEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE--
T ss_pred ccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC--
Confidence 99999999876 7789999999999999999987542 11 11233567999999999999999876321
Q ss_pred cEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCCcccceeeeccccchhh
Q 004301 466 PTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIAPGVNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCP 545 (762)
Q Consensus 466 ~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP 545 (762)
+ .+ ++... ..|..++|||||||
T Consensus 352 --~-----------------------------------t~--------~~~~~-------------~~y~~~sGTSmAaP 373 (441)
T 1y9z_A 352 --T-----------------------------------TV--------SNQGN-------------QDYEYYNGTSMATP 373 (441)
T ss_dssp --E-----------------------------------EE--------EEEEE-------------ESEEEECSHHHHHH
T ss_pred --c-----------------------------------cc--------ccccC-------------CCceeecccccCCc
Confidence 1 01 11111 37999999999999
Q ss_pred hHHHHHHHHHhhCCCCCHHHHHHHHHhcccccccCCcccccccCCCCCCCCCCCCCCcCccccCCCCeeecCCcchhhhh
Q 004301 546 HVSGLAALLKAAHPEWSPAAIRSALMTTAYVSYKNGQKLQDIATGKASTPFDHGAGHVNPVSALNPGLVYDLTVDDYLGF 625 (762)
Q Consensus 546 ~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~lv~d~~~~~y~~~ 625 (762)
||||++|||+|+||+|+|++||++||+||++++..+ .+..||+|+||+.+|++ |+.|
T Consensus 374 ~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g------------~~~~~G~G~vn~~~A~~-----------~~~~ 430 (441)
T 1y9z_A 374 HVSGVATLVWSYHPECSASQVRAALNATADDLSVAG------------RDNQTGYGMINAVAAKA-----------YLDE 430 (441)
T ss_dssp HHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS------------CBTTTBTCBCCHHHHHH-----------HHHH
T ss_pred ccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC------------CcccccccccCHHHHHH-----------HHHh
Confidence 999999999999999999999999999999885432 34589999999999974 9999
Q ss_pred ccccCCC
Q 004301 626 LCALNYT 632 (762)
Q Consensus 626 ~~~~~~~ 632 (762)
||+.+++
T Consensus 431 lc~~~~~ 437 (441)
T 1y9z_A 431 SCTGPTD 437 (441)
T ss_dssp CTTCC--
T ss_pred hhcCCCC
Confidence 9998754
No 9
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=3.5e-55 Score=505.07 Aligned_cols=374 Identities=26% Similarity=0.293 Sum_probs=275.1
Q ss_pred CCCCCeEEEEeCCCCCCcchhhhHHHHHHhhcccCCCCcEEEEEcceeeEEEEEcCH----HHHHHHhc--CCCeEEEEe
Q 004301 26 PDQRATYIIHMAKSEMPASFEHHTHWYESSLKSVSDSAEILYTYDNVIHGFSTQLTR----EEAESLEQ--RPGILSVLP 99 (762)
Q Consensus 26 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~y~~~~~g~s~~~~~----~~~~~L~~--~p~V~~v~~ 99 (762)
...+++|||+|++... .+++++.. +.++.+++. .+++++++++. +.+++|++ +|+|++|||
T Consensus 28 ~~~~~~~IV~~k~~~~----------~~~~~~~~--g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vep 94 (671)
T 1r6v_A 28 EYTEGKILVGYNDRSE----------VDKIVKAV--NGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEP 94 (671)
T ss_dssp SBCTTEEEEEESSHHH----------HHHHHHHH--TCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEEC
T ss_pred ccCCccEEEEECCCcC----------HHHHHHhc--CCeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceEEec
Confidence 3468999999997431 12233333 467788886 78999999864 34566764 799999999
Q ss_pred CceeccCCC---C------------------------CCcccCCcCC--CCC-CcCCCCCCCcEEEEEcccCCCCCCCCC
Q 004301 100 ELKYELHTT---R------------------------SPEFLGLDKS--ANL-FPTSGSASEVIVGVLDTGVWPESKSFD 149 (762)
Q Consensus 100 ~~~~~~~~~---~------------------------s~~~~g~~~~--~~~-~~~~~~G~Gv~VgVIDtGid~~Hp~f~ 149 (762)
+..+++... . ....|++..+ ..+ |.. .+|+||+|||||||||++||+|.
T Consensus 95 d~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~~~~a~w~~-~tG~gV~VAVIDTGVd~~HpdL~ 173 (671)
T 1r6v_A 95 SYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIGVTQQLWEE-ASGTNIIVAVVDTGVDGTHPDLE 173 (671)
T ss_dssp CBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTTCCHHHHHH-CSCTTCEEEEEESCCBTTSGGGT
T ss_pred CeEEEeccccccCcccccccccccccccccccccccccccCCchhccCCchhhhhc-cCCCCCEEEEEeCCCCCCCcccc
Confidence 977654310 0 0123444332 345 887 89999999999999999999997
Q ss_pred CCCCCCCCCCcccccccCCCCCCCCCCceeeeeeeccccccccCCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCcc
Q 004301 150 DTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYEATLGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASL 229 (762)
Q Consensus 150 ~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~ 229 (762)
++- + .+ +++..+... ....+..|.+||||||||||||..+ +
T Consensus 174 ~~~-------~-------------------~g-~~~~~~~~~--------p~~~d~~d~~gHGThVAGiIAa~~n-g--- 214 (671)
T 1r6v_A 174 GQV-------I-------------------AG-YRPAFDEEL--------PAGTDSSYGGSAGTHVAGTIAAKKD-G--- 214 (671)
T ss_dssp TTB-------C-------------------CE-EEGGGTEEE--------CTTCBCCTTCSHHHHHHHHHHCCCS-S---
T ss_pred ccE-------E-------------------ec-ccccCCCcC--------CCCCCCccCCCcchhhhhhhhccCC-C---
Confidence 531 1 11 111111000 0011245678999999999999731 1
Q ss_pred ccccCcceeeeccCceEEEEEEEec------CC-CCHHHHHHHHHHHHhCCCcEEEEccCCCCCCCcccHHHHHHHHHHh
Q 004301 230 FGYAAGTARGMATRARVAAYKVCWV------GG-CFSSDILAAIEQAIDDNVNVLSMSLGGGTSDYYKDSVAIGAFAAME 302 (762)
Q Consensus 230 ~G~~~g~~~GvAP~A~l~~~kv~~~------~g-~~~~~i~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~ 302 (762)
.| +.||||+|+|+++|++++ .+ .....+++||+||+++|++|||||||+.. +...+..++.+|.+
T Consensus 215 ~g-----v~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~---~s~~l~~Ai~~A~~ 286 (671)
T 1r6v_A 215 KG-----IVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG---YSYTMKEAFDYAME 286 (671)
T ss_dssp SS-----CCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC---CCHHHHHHHHHHHH
T ss_pred Cc-----eEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC---CCHHHHHHHHHHHh
Confidence 12 389999999999999986 23 34567899999999999999999999853 34567778889999
Q ss_pred cCCEEEEecCCCCCCC-CCccCCCCceEEecCCCCCCccceeEEcCCCcEEEeEeeecCCCCCCceeeEEEccCCCCCCC
Q 004301 303 KGILVSCSAGNAGPSS-YSLSNVAPWITTVGAGTLDRDFPAFVSLGNGQNYSGVSLYKGDGLPGKLLPFVYAGNASNATN 381 (762)
Q Consensus 303 ~Gi~vV~AAGN~g~~~-~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~ 381 (762)
+|+++|+||||+|.+. ..+++..|++|+|||++.+..
T Consensus 287 ~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~------------------------------------------ 324 (671)
T 1r6v_A 287 HGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG------------------------------------------ 324 (671)
T ss_dssp TTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT------------------------------------------
T ss_pred CCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC------------------------------------------
Confidence 9999999999999875 567788899999998532110
Q ss_pred CCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeecCCCCccccccCcccceEEEchhhHHHHHHHHh
Q 004301 382 GNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANTESNGEELVADAHLLPATAVGQKFGDAIKSYLV 461 (762)
Q Consensus 382 ~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~ 461 (762)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCC-----CCCCCCcccceee
Q 004301 462 SDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIAPGVNILAGWSGAVGPT-----GLATDSRRVSFNI 536 (762)
Q Consensus 462 ~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~-----~~~~~~~~~~y~~ 536 (762)
...+++||++||.. ||+|||++|+++++...... ..........|..
T Consensus 325 --------------------~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~ 376 (671)
T 1r6v_A 325 --------------------TFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDY 376 (671)
T ss_dssp --------------------EEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEE
T ss_pred --------------------ceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccccccCCCceEE
Confidence 01478999999975 99999999999987642110 0001112347999
Q ss_pred eccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccccCCcccccccCCCCCCCCCCCCCCcCccccCCCCeeec
Q 004301 537 ISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAYVSYKNGQKLQDIATGKASTPFDHGAGHVNPVSALNPGLVYD 616 (762)
Q Consensus 537 ~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~lv~d 616 (762)
++|||||||||||++|||+|++|+|+|.+||++|++||+++.. +..+..||||++|+.+|++..|..+
T Consensus 377 ~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~------------~g~d~~~G~G~vna~~Al~~~l~~~ 444 (671)
T 1r6v_A 377 YQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNG------------NGWDHDTGYGLVKLDAALQGPLPTQ 444 (671)
T ss_dssp EESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSS------------SSCBTTTBTCBCCHHHHHHCCCCSS
T ss_pred ecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCC------------CCCCCCcccceeCHHHHhhhhcCCC
Confidence 9999999999999999999999999999999999999998743 2334589999999999999888776
Q ss_pred CCcchh
Q 004301 617 LTVDDY 622 (762)
Q Consensus 617 ~~~~~y 622 (762)
....+|
T Consensus 445 ~~~~~~ 450 (671)
T 1r6v_A 445 GGVEEF 450 (671)
T ss_dssp SEEEEE
T ss_pred CCccce
Confidence 655444
No 10
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=9.9e-52 Score=435.07 Aligned_cols=265 Identities=31% Similarity=0.368 Sum_probs=214.5
Q ss_pred ccCCcCC--CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeecccccc
Q 004301 113 FLGLDKS--ANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYE 190 (762)
Q Consensus 113 ~~g~~~~--~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~ 190 (762)
.|++..+ ..+|..+..|+||+|||||||||++||+|.++ ++..++|.++.
T Consensus 12 ~w~l~~i~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~---------------------------~~~~~~~~~~~- 63 (280)
T 1dbi_A 12 QYGPQNTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK---------------------------VIKGYDFVDND- 63 (280)
T ss_dssp CCTTGGGTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTTT---------------------------EEEEEETTTTB-
T ss_pred CCChhhcCcHHHHhhcCCCCCCEEEEEeCCcCCCChhhccC---------------------------cccceeccCCC-
Confidence 4666554 46899988888999999999999999999742 34444454321
Q ss_pred ccCCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC-CCHHHHHHHHHHH
Q 004301 191 ATLGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG-CFSSDILAAIEQA 269 (762)
Q Consensus 191 ~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a 269 (762)
.++.|..||||||||||+|...+..+ +.||||+|+|+.+|++++.+ ++.+++++||+||
T Consensus 64 ------------~~~~d~~gHGT~vAgiia~~~~~~~g--------~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a 123 (280)
T 1dbi_A 64 ------------YDPMDLNNHGTHVAGIAAAETNNATG--------IAGMAPNTRILAVRALDRNGSGTLSDIADAIIYA 123 (280)
T ss_dssp ------------SCCCCSSSHHHHHHHHHHCCCSSSSS--------CCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHH
T ss_pred ------------CCCCCCCCcHHHHHHHHhCcCCCCCc--------ceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHH
Confidence 23678899999999999998543322 37999999999999998776 7888999999999
Q ss_pred HhCCCcEEEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCCCccCCCCceEEecCCCCCCccceeEEcCCC
Q 004301 270 IDDNVNVLSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSYSLSNVAPWITTVGAGTLDRDFPAFVSLGNG 349 (762)
Q Consensus 270 ~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g 349 (762)
+++|++|||||||... ....+..++.++.++|+++|+||||+|.....+++..+++|+|||++.
T Consensus 124 ~~~g~~Vin~S~G~~~---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------- 187 (280)
T 1dbi_A 124 ADSGAEVINLSLGCDC---HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQ------------- 187 (280)
T ss_dssp HHTTCSEEEECCSSCC---CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECT-------------
T ss_pred HHCCCCEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCC-------------
Confidence 9999999999999853 235677788899999999999999999887778888999999998421
Q ss_pred cEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeec
Q 004301 350 QNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANT 429 (762)
Q Consensus 350 ~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~ 429 (762)
T Consensus 188 -------------------------------------------------------------------------------- 187 (280)
T 1dbi_A 188 -------------------------------------------------------------------------------- 187 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEEecC
Q 004301 430 ESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIAPG 509 (762)
Q Consensus 430 ~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG 509 (762)
.+.+++||++||.. ||+|||
T Consensus 188 ----------------------------------------------------~~~~~~~S~~G~~~--------dv~ApG 207 (280)
T 1dbi_A 188 ----------------------------------------------------YDRLASFSNYGTWV--------DVVAPG 207 (280)
T ss_dssp ----------------------------------------------------TSCBCTTBCCSTTC--------CEEEEC
T ss_pred ----------------------------------------------------CCCcCCCCCCCCCc--------eEEEec
Confidence 12578999999854 999999
Q ss_pred CcEEecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccccCCcccccccC
Q 004301 510 VNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAYVSYKNGQKLQDIAT 589 (762)
Q Consensus 510 ~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~ 589 (762)
++|+++++.+ .|..++|||||||||||++|||++ |.+++.+||++|++||+++...
T Consensus 208 ~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~~--------- 263 (280)
T 1dbi_A 208 VDIVSTITGN-------------RYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISGT--------- 263 (280)
T ss_dssp SSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTTB---------
T ss_pred CCeEeecCCC-------------CEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCCC---------
Confidence 9999998764 899999999999999999999987 8999999999999999987421
Q ss_pred CCCCCCCCCCCCCcCccccCC
Q 004301 590 GKASTPFDHGAGHVNPVSALN 610 (762)
Q Consensus 590 ~~~~~~~~~G~G~vd~~~A~~ 610 (762)
...||+|+||+.+|++
T Consensus 264 -----~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 264 -----GTYFKYGRINSYNAVT 279 (280)
T ss_dssp -----TTTBSSEECCHHHHHT
T ss_pred -----CCcccCCEECHHHHhc
Confidence 2479999999999986
No 11
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=1.8e-51 Score=430.27 Aligned_cols=262 Identities=33% Similarity=0.465 Sum_probs=219.5
Q ss_pred ccCCcCC--CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeecccccc
Q 004301 113 FLGLDKS--ANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYE 190 (762)
Q Consensus 113 ~~g~~~~--~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~ 190 (762)
.|++..+ +.+|..+++|+||+|+|||||| .+||+|+ +...++|..+
T Consensus 5 ~W~l~~i~~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~-----------------------------~~~~~~~~~~-- 52 (269)
T 1gci_A 5 PWGISRVQAPAAHNRGLTGSGVKVAVLDTGI-STHPDLN-----------------------------IRGGASFVPG-- 52 (269)
T ss_dssp CHHHHHTTHHHHHHTTCSCTTCEEEEEESCC-CCCTTCC-----------------------------EEEEEECSTT--
T ss_pred CcChhhcCcHHHHhcCCCCCCCEEEEECCCC-CCCHhhc-----------------------------ccCCcccCCC--
Confidence 3555443 4589999999999999999999 8999994 1223334322
Q ss_pred ccCCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC-CCHHHHHHHHHHH
Q 004301 191 ATLGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG-CFSSDILAAIEQA 269 (762)
Q Consensus 191 ~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a 269 (762)
...+.|..||||||||||+|..+ . .| +.||||+|+|+.+|+++..+ +..+++++||+|+
T Consensus 53 -----------~~~~~d~~gHGT~vAgiia~~~~-~---~~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a 112 (269)
T 1gci_A 53 -----------EPSTQDGNGHGTHVAGTIAALNN-S---IG-----VLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWA 112 (269)
T ss_dssp -----------CCSCSCSSSHHHHHHHHHHCCCS-S---SB-----CCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHH
T ss_pred -----------CCCCCCCCCChHHHHHHHhcCcC-C---CC-----cEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHH
Confidence 11256789999999999999731 1 12 37999999999999998776 7788999999999
Q ss_pred HhCCCcEEEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCCCccCCCCceEEecCCCCCCccceeEEcCCC
Q 004301 270 IDDNVNVLSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSYSLSNVAPWITTVGAGTLDRDFPAFVSLGNG 349 (762)
Q Consensus 270 ~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g 349 (762)
+++|++|||||||.... ...+..++.++.++|++||+||||+|.....+++..+++|+|||++.
T Consensus 113 ~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~------------- 176 (269)
T 1gci_A 113 GNNGMHVANLSLGSPSP---SATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ------------- 176 (269)
T ss_dssp HHTTCSEEEECCCBSSC---CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT-------------
T ss_pred HHCCCeEEEeCCCCCCC---CHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC-------------
Confidence 99999999999998542 35677778889999999999999999888888889999999998421
Q ss_pred cEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeec
Q 004301 350 QNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANT 429 (762)
Q Consensus 350 ~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~ 429 (762)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEEecC
Q 004301 430 ESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIAPG 509 (762)
Q Consensus 430 ~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG 509 (762)
.+.+++||++||.+ ||+|||
T Consensus 177 ----------------------------------------------------~~~~~~~S~~G~~~--------di~APG 196 (269)
T 1gci_A 177 ----------------------------------------------------NNNRASFSQYGAGL--------DIVAPG 196 (269)
T ss_dssp ----------------------------------------------------TSCBCTTCCCSTTE--------EEEEEC
T ss_pred ----------------------------------------------------CCCCCCCCCCCCCc--------ceEecC
Confidence 12578999999965 999999
Q ss_pred CcEEecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccccCCcccccccC
Q 004301 510 VNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAYVSYKNGQKLQDIAT 589 (762)
Q Consensus 510 ~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~ 589 (762)
++|+++++.+ .|..++|||||||||||++|||+|++|+|++.|||++|++||+++.
T Consensus 197 ~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g----------- 252 (269)
T 1gci_A 197 VNVQSTYPGS-------------TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG----------- 252 (269)
T ss_dssp SSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS-----------
T ss_pred CCeEeecCCC-------------CEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC-----------
Confidence 9999998764 8999999999999999999999999999999999999999999873
Q ss_pred CCCCCCCCCCCCCcCccccCC
Q 004301 590 GKASTPFDHGAGHVNPVSALN 610 (762)
Q Consensus 590 ~~~~~~~~~G~G~vd~~~A~~ 610 (762)
.+..||||+||+.+|++
T Consensus 253 ----~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 253 ----STNLYGSGLVNAEAATR 269 (269)
T ss_dssp ----CHHHHTTCBCCHHHHTC
T ss_pred ----CCCCcccCccCHHHHcC
Confidence 23489999999999985
No 12
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=1.5e-51 Score=432.59 Aligned_cols=262 Identities=31% Similarity=0.444 Sum_probs=217.3
Q ss_pred cCCcCC--CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeeccccccc
Q 004301 114 LGLDKS--ANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYEA 191 (762)
Q Consensus 114 ~g~~~~--~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~ 191 (762)
|++..+ ..+|..+++|+||+|+|||||||++||+|+ +...++|..+.
T Consensus 6 w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-----------------------------~~~g~~~~~~~-- 54 (274)
T 1r0r_E 6 YGIPLIKADKVQAQGFKGANVKVAVLDTGIQASHPDLN-----------------------------VVGGASFVAGE-- 54 (274)
T ss_dssp THHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-----------------------------EEEEEECSTTC--
T ss_pred CchhhcCCHHHHhcCCCCCCCEEEEEcCCCCCCCHhHc-----------------------------CCCCccccCCC--
Confidence 555443 468999999999999999999999999994 12233343221
Q ss_pred cCCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC-CCHHHHHHHHHHHH
Q 004301 192 TLGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG-CFSSDILAAIEQAI 270 (762)
Q Consensus 192 ~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~ 270 (762)
..+.|..||||||||||+|..+ + .| +.||||+|+|+.+|+++..+ +..+++++||+||+
T Consensus 55 -----------~~~~d~~gHGT~vAgiia~~~~-~---~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~ 114 (274)
T 1r0r_E 55 -----------AYNTDGNGHGTHVAGTVAALDN-T---TG-----VLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWAT 114 (274)
T ss_dssp -----------CTTCCSSSHHHHHHHHHHCCSS-S---SB-----CCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHH
T ss_pred -----------CCCCCCCCCHHHHHHHHHccCC-C---Cc-----eEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHH
Confidence 1256789999999999999731 1 12 38999999999999998776 77889999999999
Q ss_pred hCCCcEEEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCCC----CCccCCCCceEEecCCCCCCccceeEEc
Q 004301 271 DDNVNVLSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSS----YSLSNVAPWITTVGAGTLDRDFPAFVSL 346 (762)
Q Consensus 271 ~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~p~vitVgA~~~~~~~~~~~~~ 346 (762)
+++++|||||||.... .+.+..++.++.++|+++|+||||+|... ..+++..|++|+|||++.
T Consensus 115 ~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~---------- 181 (274)
T 1r0r_E 115 TNGMDVINMSLGGASG---STAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS---------- 181 (274)
T ss_dssp HTTCSEEEECEEBSSC---CHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECT----------
T ss_pred HcCCCEEEeCCCCCCC---cHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecC----------
Confidence 9999999999998542 35677788899999999999999999763 356677889999998421
Q ss_pred CCCcEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEE
Q 004301 347 GNGQNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVL 426 (762)
Q Consensus 347 ~~g~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~ 426 (762)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecCCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEE
Q 004301 427 ANTESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMI 506 (762)
Q Consensus 427 ~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~ 506 (762)
.+.++.||++||. |||+
T Consensus 182 -------------------------------------------------------~~~~~~~S~~G~~--------~di~ 198 (274)
T 1r0r_E 182 -------------------------------------------------------NSNRASFSSVGAE--------LEVM 198 (274)
T ss_dssp -------------------------------------------------------TSCBCTTCCCSTT--------EEEE
T ss_pred -------------------------------------------------------CCCcCccCCCCCC--------ceEE
Confidence 1257889999985 4999
Q ss_pred ecCCcEEecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccccCCccccc
Q 004301 507 APGVNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAYVSYKNGQKLQD 586 (762)
Q Consensus 507 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~ 586 (762)
|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++.+||++|++||+++.
T Consensus 199 APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g-------- 257 (274)
T 1r0r_E 199 APGAGVYSTYPTN-------------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG-------- 257 (274)
T ss_dssp EECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS--------
T ss_pred eCCCCeEeecCCC-------------CEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC--------
Confidence 9999999998764 8999999999999999999999999999999999999999999873
Q ss_pred ccCCCCCCCCCCCCCCcCccccCC
Q 004301 587 IATGKASTPFDHGAGHVNPVSALN 610 (762)
Q Consensus 587 ~~~~~~~~~~~~G~G~vd~~~A~~ 610 (762)
++..||||+||+.+|++
T Consensus 258 -------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 258 -------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp -------CHHHHTTCBCCHHHHTC
T ss_pred -------CCCCcccCccCHHHHhC
Confidence 23489999999999985
No 13
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=1.1e-53 Score=465.55 Aligned_cols=306 Identities=22% Similarity=0.237 Sum_probs=197.6
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeeccccccccCCCCCCC
Q 004301 120 ANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYEATLGPIDES 199 (762)
Q Consensus 120 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 199 (762)
..+|..+..|+||+|||||||||++||+|++..+.+....|+..++........ .+..+.. ....++..........
T Consensus 21 ~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~ 97 (357)
T 4h6x_A 21 ADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYA-AFQSIRD--QGLKGKEKEEALEAVI 97 (357)
T ss_dssp HHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHH-HHHHHHH--HTCCSHHHHHHHHHHC
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCccccc-ccccccC--cccccccccccccccc
Confidence 458999999999999999999999999999876666677776654422110000 0000000 0000000000000000
Q ss_pred CCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC------CCHHHHHHHHHHHHhCC
Q 004301 200 KESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG------CFSSDILAAIEQAIDDN 273 (762)
Q Consensus 200 ~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g------~~~~~i~~ai~~a~~~g 273 (762)
.+..++.|.+||||||||||||+..+ .+.||||+|+|+.+|++.... ....++++||+||+++|
T Consensus 98 ~~~~~~~D~~gHGThVAGiiag~~~~----------g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~g 167 (357)
T 4h6x_A 98 PDTKDRIVLNDHACHVTSTIVGQEHS----------PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELG 167 (357)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCCTTS----------SCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHTT
T ss_pred CCCCCCcCCCCcHHHHHHHHhccCCC----------CceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHcC
Confidence 11123557789999999999997422 248999999999999975321 34557889999999999
Q ss_pred CcEEEEccCCCC-CCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCCCccCCCCceEEecCCCCCCccceeEEcCCCcEE
Q 004301 274 VNVLSMSLGGGT-SDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSYSLSNVAPWITTVGAGTLDRDFPAFVSLGNGQNY 352 (762)
Q Consensus 274 ~dVIn~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~ 352 (762)
++|||||||... .....+.+..++.++.++|++||+||||+|.....+++..|++|+|||++.
T Consensus 168 ~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~---------------- 231 (357)
T 4h6x_A 168 ANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKV---------------- 231 (357)
T ss_dssp CSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECT----------------
T ss_pred CCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEecc----------------
Confidence 999999999764 334456788888899999999999999999888888888999999998432
Q ss_pred EeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeecCCC
Q 004301 353 SGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANTESN 432 (762)
Q Consensus 353 ~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~ 432 (762)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEEecCCcE
Q 004301 433 GEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIAPGVNI 512 (762)
Q Consensus 433 ~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I 512 (762)
.+.+++|||||+. ..||||+|||++|
T Consensus 232 -------------------------------------------------~~~~~~fSn~G~~-----~~~~di~APG~~i 257 (357)
T 4h6x_A 232 -------------------------------------------------DGTPCHFSNWGGN-----NTKEGILAPGEEI 257 (357)
T ss_dssp -------------------------------------------------TSSBCTTCC---C-----TTTTEEEEECSSE
T ss_pred -------------------------------------------------CCcccccccCCCC-----CCccceeecCCCe
Confidence 1267899999975 4589999999999
Q ss_pred EecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhh----CCCCCHHHHHHHHHhcccccccCCccccccc
Q 004301 513 LAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAA----HPEWSPAAIRSALMTTAYVSYKNGQKLQDIA 588 (762)
Q Consensus 513 ~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~ 588 (762)
+++++.+ ..|..++|||||||||||++|||+++ +|.|+++|||++|++||++++..
T Consensus 258 ~s~~~~~------------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~-------- 317 (357)
T 4h6x_A 258 LGAQPCT------------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPE-------- 317 (357)
T ss_dssp EECCTTC------------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC---------------
T ss_pred EeccCCC------------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCC--------
Confidence 9998765 25778999999999999999999954 66899999999999999987531
Q ss_pred CCCCCCCCCCCCCCcCccccCC
Q 004301 589 TGKASTPFDHGAGHVNPVSALN 610 (762)
Q Consensus 589 ~~~~~~~~~~G~G~vd~~~A~~ 610 (762)
....+..||+|+||+.+|++
T Consensus 318 --~~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 318 --VVEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp ---------CTTCBCCHHHHHH
T ss_pred --CCCCcccceeEEecHHHHHH
Confidence 23345689999999999997
No 14
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=4.9e-51 Score=430.00 Aligned_cols=265 Identities=33% Similarity=0.462 Sum_probs=218.4
Q ss_pred ccCCcCC--CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeecccccc
Q 004301 113 FLGLDKS--ANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYE 190 (762)
Q Consensus 113 ~~g~~~~--~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~ 190 (762)
.|++..+ ..+|..+++|+||+|||||||||++||+|+. ...++|..+.
T Consensus 5 ~w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~-----------------------------~~g~~~~~~~- 54 (281)
T 1to2_E 5 PYGVSQIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLKV-----------------------------AGGASMVPSE- 54 (281)
T ss_dssp CHHHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCCE-----------------------------EEEEECCTTC-
T ss_pred CcchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCCHHHcC-----------------------------cCCccccCCC-
Confidence 3555543 4589999999999999999999999999942 2223332210
Q ss_pred ccCCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC-CCHHHHHHHHHHH
Q 004301 191 ATLGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG-CFSSDILAAIEQA 269 (762)
Q Consensus 191 ~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a 269 (762)
.....|..||||||||||+|..+ . .| +.||||+|+|+.+|+++..+ +..+++++||+|+
T Consensus 55 -----------~~~~~d~~gHGT~vAgiia~~~~-~---~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a 114 (281)
T 1to2_E 55 -----------TNPFQDNNSHGTHVAGTVAALNN-S---IG-----VLGVAPSASLYAVKVLGADGSGQYSWIINGIEWA 114 (281)
T ss_dssp -----------CCTTCCSSSHHHHHHHHHHCCSS-S---SS-----BCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHH
T ss_pred -----------CCCCCCCCCcHHHHHHHHhccCC-C---Cc-----ceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHH
Confidence 11236789999999999999731 1 11 38999999999999998776 7788999999999
Q ss_pred HhCCCcEEEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCCC----CCccCCCCceEEecCCCCCCccceeEE
Q 004301 270 IDDNVNVLSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSS----YSLSNVAPWITTVGAGTLDRDFPAFVS 345 (762)
Q Consensus 270 ~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~p~vitVgA~~~~~~~~~~~~ 345 (762)
++++++|||||||.... ...+..++.++.++|++||+||||+|... ..+++..|++|+|||++.
T Consensus 115 ~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~--------- 182 (281)
T 1to2_E 115 IANNMDVINMSLGGPSG---SAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDS--------- 182 (281)
T ss_dssp HHTTCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECT---------
T ss_pred HHCCCcEEEECCcCCCC---CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecC---------
Confidence 99999999999998542 35677788899999999999999999763 356777889999997421
Q ss_pred cCCCcEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEE
Q 004301 346 LGNGQNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMV 425 (762)
Q Consensus 346 ~~~g~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i 425 (762)
T Consensus 183 -------------------------------------------------------------------------------- 182 (281)
T 1to2_E 183 -------------------------------------------------------------------------------- 182 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeecCCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcE
Q 004301 426 LANTESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDM 505 (762)
Q Consensus 426 ~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI 505 (762)
.+.+++||++||.. ||
T Consensus 183 --------------------------------------------------------~~~~~~fS~~G~~~--------di 198 (281)
T 1to2_E 183 --------------------------------------------------------SNQRASFSSVGPEL--------DV 198 (281)
T ss_dssp --------------------------------------------------------TSCBCTTCCCSTTC--------CE
T ss_pred --------------------------------------------------------CCCcCCcCCCCCCc--------eE
Confidence 12578999999954 99
Q ss_pred EecCCcEEecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccccCCcccc
Q 004301 506 IAPGVNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAYVSYKNGQKLQ 585 (762)
Q Consensus 506 ~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g~~~~ 585 (762)
+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++++||++|++||+++.
T Consensus 199 ~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g------- 258 (281)
T 1to2_E 199 MAPGVSIQSTLPGN-------------KYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG------- 258 (281)
T ss_dssp EEECSSEEEEETTT-------------EEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS-------
T ss_pred EecCCCeEeecCCC-------------CEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC-------
Confidence 99999999998764 7999999999999999999999999999999999999999999873
Q ss_pred cccCCCCCCCCCCCCCCcCccccCCC
Q 004301 586 DIATGKASTPFDHGAGHVNPVSALNP 611 (762)
Q Consensus 586 ~~~~~~~~~~~~~G~G~vd~~~A~~~ 611 (762)
+++.||||+||+.+|+++
T Consensus 259 --------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 259 --------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp --------CHHHHTTCBCCHHHHTSS
T ss_pred --------CCCCcccceecHHHHhhh
Confidence 234899999999999974
No 15
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=1e-50 Score=427.31 Aligned_cols=264 Identities=28% Similarity=0.397 Sum_probs=220.0
Q ss_pred ccCCcC--CCCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeecccccc
Q 004301 113 FLGLDK--SANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYE 190 (762)
Q Consensus 113 ~~g~~~--~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~ 190 (762)
.|++.. +..+|... +|+||+|||||||||++||+|.++ ++..++|.++.
T Consensus 12 ~w~l~~i~~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~~~- 62 (279)
T 1thm_A 12 QYGPQKIQAPQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK---------------------------VVGGWDFVDND- 62 (279)
T ss_dssp CCHHHHTTHHHHHTTC-CCTTCEEEEEESCCCTTCTTTTTT---------------------------EEEEEETTTTB-
T ss_pred ccChhhCChHHHHhcC-CCCCCEEEEEccCCCCCCcchhcC---------------------------ccccccccCCC-
Confidence 345443 34588876 699999999999999999999742 44444554321
Q ss_pred ccCCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC-CCHHHHHHHHHHH
Q 004301 191 ATLGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG-CFSSDILAAIEQA 269 (762)
Q Consensus 191 ~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a 269 (762)
..+.|..||||||||||+|...+..+ +.||||+|+|+.+|++++.+ ++..++++||+||
T Consensus 63 ------------~~~~d~~gHGT~vAgiia~~~~n~~g--------~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a 122 (279)
T 1thm_A 63 ------------STPQNGNGHGTHCAGIAAAVTNNSTG--------IAGTAPKASILAVRVLDNSGSGTWTAVANGITYA 122 (279)
T ss_dssp ------------SCCCCSSSHHHHHHHHHHCCCSSSSS--------CCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHH
T ss_pred ------------CCCCCCCCcHHHHHHHHhCccCCCCc--------cEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHH
Confidence 23578899999999999998644322 37999999999999998776 7788999999999
Q ss_pred HhCCCcEEEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCCCccCCCCceEEecCCCCCCccceeEEcCCC
Q 004301 270 IDDNVNVLSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSYSLSNVAPWITTVGAGTLDRDFPAFVSLGNG 349 (762)
Q Consensus 270 ~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g 349 (762)
+++|++|||||||... ..+.+..++.++.++|+++|+||||+|.....+++..+++|+|||++.
T Consensus 123 ~~~g~~Vin~S~G~~~---~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------- 186 (279)
T 1thm_A 123 ADQGAKVISLSLGGTV---GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQ------------- 186 (279)
T ss_dssp HHTTCSEEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECT-------------
T ss_pred HHCCCCEEEEecCCCC---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCC-------------
Confidence 9999999999999853 235677788899999999999999999888888888999999998431
Q ss_pred cEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeec
Q 004301 350 QNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANT 429 (762)
Q Consensus 350 ~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~ 429 (762)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 1thm_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEEecC
Q 004301 430 ESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIAPG 509 (762)
Q Consensus 430 ~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG 509 (762)
.+.++.||++||.. ||+|||
T Consensus 187 ----------------------------------------------------~~~~~~fS~~G~~~--------dv~APG 206 (279)
T 1thm_A 187 ----------------------------------------------------NDNKSSFSTYGSWV--------DVAAPG 206 (279)
T ss_dssp ----------------------------------------------------TSCBCTTCCCCTTC--------CEEEEC
T ss_pred ----------------------------------------------------CCCcCCcCCCCCce--------EEEEcC
Confidence 12578999999864 999999
Q ss_pred CcEEecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccccCCcccccccC
Q 004301 510 VNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAYVSYKNGQKLQDIAT 589 (762)
Q Consensus 510 ~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~ 589 (762)
++|+++++.+ .|..++|||||||||||++||| ++|.+++++||++|++||+++...+
T Consensus 207 ~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~~-------- 263 (279)
T 1thm_A 207 SSIYSTYPTS-------------TYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGTG-------- 263 (279)
T ss_dssp SSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTBT--------
T ss_pred CCeEEEeCCC-------------CEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCCC--------
Confidence 9999998764 8999999999999999999999 5799999999999999999875321
Q ss_pred CCCCCCCCCCCCCcCccccCC
Q 004301 590 GKASTPFDHGAGHVNPVSALN 610 (762)
Q Consensus 590 ~~~~~~~~~G~G~vd~~~A~~ 610 (762)
..||+|+||+.+|++
T Consensus 264 ------~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 264 ------TYWAKGRVNAYKAVQ 278 (279)
T ss_dssp ------TTBSSEECCHHHHHH
T ss_pred ------ccccCCeeCHHHHhc
Confidence 378999999999975
No 16
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=2e-51 Score=442.07 Aligned_cols=271 Identities=27% Similarity=0.409 Sum_probs=218.2
Q ss_pred cccCCcCC--CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeeccccc
Q 004301 112 EFLGLDKS--ANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGY 189 (762)
Q Consensus 112 ~~~g~~~~--~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~ 189 (762)
..|++..+ ..+|..+++|+||+|||||||||++||+|.+ +++..++|..++
T Consensus 21 ~~w~l~~i~~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~---------------------------~~~~~~~~~~~~ 73 (327)
T 2x8j_A 21 VPMGVEIVEAPAVWRASAKGAGQIIGVIDTGCQVDHPDLAE---------------------------RIIGGVNLTTDY 73 (327)
T ss_dssp CCHHHHHTTHHHHHHHHGGGTTCEEEEEESCCCTTCTTTGG---------------------------GEEEEEECSSGG
T ss_pred cCcchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCChhHhh---------------------------cccCCccccCCC
Confidence 34665543 5689999999999999999999999999974 344555565443
Q ss_pred cccCCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC-CCHHHHHHHHHH
Q 004301 190 EATLGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG-CFSSDILAAIEQ 268 (762)
Q Consensus 190 ~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ 268 (762)
.. +.....|..||||||||||+|..+ +. | +.||||+|+|+.+|+++..+ +..+++++||+|
T Consensus 74 ~~---------~~~~~~d~~gHGT~VAgiia~~~~-~~---g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~ 135 (327)
T 2x8j_A 74 GG---------DETNFSDNNGHGTHVAGTVAAAET-GS---G-----VVGVAPKADLFIIKALSGDGSGEMGWIAKAIRY 135 (327)
T ss_dssp GG---------CTTCCCCSSSHHHHHHHHHHCCCC-SS---B-----CCCSSTTCEEEEEECSCTTSEECHHHHHHHHHH
T ss_pred CC---------CCCCCCCCCCchHHHHHHHhccCC-CC---C-----cEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHH
Confidence 11 112356889999999999999732 11 1 38999999999999998776 778899999999
Q ss_pred HHh------CCCcEEEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCCC-----CCccCCCCceEEecCCCCC
Q 004301 269 AID------DNVNVLSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSS-----YSLSNVAPWITTVGAGTLD 337 (762)
Q Consensus 269 a~~------~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-----~~~~~~~p~vitVgA~~~~ 337 (762)
|++ ++++|||||||... ....+..++.++.++|++||+||||+|... ..+++..|++|+|||++.
T Consensus 136 a~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~- 211 (327)
T 2x8j_A 136 AVDWRGPKGEQMRIITMSLGGPT---DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDF- 211 (327)
T ss_dssp HHHCCCTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECT-
T ss_pred HHhhcccccCCceEEEECCCcCC---CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECC-
Confidence 999 89999999999854 235677778889999999999999999752 356778899999998431
Q ss_pred CccceeEEcCCCcEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHH
Q 004301 338 RDFPAFVSLGNGQNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVK 417 (762)
Q Consensus 338 ~~~~~~~~~~~g~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~ 417 (762)
T Consensus 212 -------------------------------------------------------------------------------- 211 (327)
T 2x8j_A 212 -------------------------------------------------------------------------------- 211 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCceEEEEeecCCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCC
Q 004301 418 AAGGLGMVLANTESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSIT 497 (762)
Q Consensus 418 ~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~ 497 (762)
.+.++.||++||.
T Consensus 212 ----------------------------------------------------------------~~~~~~fS~~G~~--- 224 (327)
T 2x8j_A 212 ----------------------------------------------------------------DLRLSDFTNTNEE--- 224 (327)
T ss_dssp ----------------------------------------------------------------TCCBSCC---CCC---
T ss_pred ----------------------------------------------------------------CCCCCCccCCCCC---
Confidence 1267899999984
Q ss_pred CCCCCCcEEecCCcEEecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhh-----CCCCCHHHHHHHHHh
Q 004301 498 PELLKPDMIAPGVNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAA-----HPEWSPAAIRSALMT 572 (762)
Q Consensus 498 ~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-----~p~~sp~~ik~~L~~ 572 (762)
|||+|||++|+++++.+ .|..++|||||||||||++|||+|+ +|.+++.+||++|++
T Consensus 225 -----~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~ 286 (327)
T 2x8j_A 225 -----IDIVAPGVGIKSTYLDS-------------GYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVR 286 (327)
T ss_dssp -----CSEEEECSSEEEECSTT-------------CEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHT
T ss_pred -----ceEecCcCceEeecCCC-------------CEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHH
Confidence 49999999999998764 7999999999999999999999999 999999999999999
Q ss_pred cccccccCCcccccccCCCCCCCCCCCCCCcCccccCC
Q 004301 573 TAYVSYKNGQKLQDIATGKASTPFDHGAGHVNPVSALN 610 (762)
Q Consensus 573 TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~ 610 (762)
||+++. .++..||+|++|+.+|++
T Consensus 287 tA~~~g--------------~~~~~~G~G~vd~~~A~~ 310 (327)
T 2x8j_A 287 RATPIG--------------FTAQAEGNGFLTLDLVER 310 (327)
T ss_dssp TEECCS--------------SCHHHHTTCEECTTHHHH
T ss_pred hCccCC--------------CCCCceeeeEECHHHHHH
Confidence 999863 134589999999999997
No 17
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=3.6e-50 Score=430.62 Aligned_cols=289 Identities=30% Similarity=0.398 Sum_probs=226.6
Q ss_pred ccCCcC--CCCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeecccccc
Q 004301 113 FLGLDK--SANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYE 190 (762)
Q Consensus 113 ~~g~~~--~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~ 190 (762)
.|++.. +..+|..+++|+||+|||||||||++||+|.++ +...++|.....
T Consensus 7 ~W~l~~i~~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~---------------------------~~~~~~~~~~~~ 59 (310)
T 2ixt_A 7 PWGIKAIYNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN---------------------------VEQCKDFTGATT 59 (310)
T ss_dssp CHHHHHHHTCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT---------------------------EEEEEESSSSSS
T ss_pred CCchhhcCchhhhhccCCCCCcEEEEEecCCCCCCHHHhhc---------------------------ccccccccCCCC
Confidence 355544 467999999999999999999999999999753 333444443210
Q ss_pred ccCCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC-CCHHHHHHHHHHH
Q 004301 191 ATLGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG-CFSSDILAAIEQA 269 (762)
Q Consensus 191 ~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a 269 (762)
.......|..||||||||||+|....+ ...+.||||+|+|+.+|++++.+ ++.+++++||+|+
T Consensus 60 ---------~~~~~~~d~~gHGT~vAgiia~~~~~n-------~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a 123 (310)
T 2ixt_A 60 ---------PINNSCTDRNGHGTHVAGTALADGGSD-------QAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHA 123 (310)
T ss_dssp ---------CEETCCCCSSSHHHHHHHHHHCBCCTT-------SCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHH
T ss_pred ---------CCCCCCCCCCCCHHHHHHHHhccCCCC-------CCceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHH
Confidence 011235678999999999999985221 12248999999999999998776 6888999999999
Q ss_pred HhCCC-----cEEEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCC--CCCccCCCCceEEecCCCCCCccce
Q 004301 270 IDDNV-----NVLSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPS--SYSLSNVAPWITTVGAGTLDRDFPA 342 (762)
Q Consensus 270 ~~~g~-----dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~--~~~~~~~~p~vitVgA~~~~~~~~~ 342 (762)
+++++ +|||||||.... ...+..++.++.++|++||+||||+|.. ...+++..|++|+|||++....
T Consensus 124 ~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~--- 197 (310)
T 2ixt_A 124 ADQATATGTKTIISMSLGSSAN---NSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQ--- 197 (310)
T ss_dssp HHHHHHHTCCEEEEECCCBSSC---CHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEE---
T ss_pred HHhhhccCCCeEEEEcCCCCCC---CHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccccc---
Confidence 99887 999999998542 4567777788999999999999999976 3456778899999998431000
Q ss_pred eEEcCCCcEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCce
Q 004301 343 FVSLGNGQNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGL 422 (762)
Q Consensus 343 ~~~~~~g~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~ 422 (762)
T Consensus 198 -------------------------------------------------------------------------------- 197 (310)
T 2ixt_A 198 -------------------------------------------------------------------------------- 197 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEeecCCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCC----C
Q 004301 423 GMVLANTESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSIT----P 498 (762)
Q Consensus 423 g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~----~ 498 (762)
.....++.||++||.... .
T Consensus 198 ---------------------------------------------------------~g~~~~~~~S~~G~~~~~g~~~~ 220 (310)
T 2ixt_A 198 ---------------------------------------------------------NGTYRVADYSSRGYISTAGDYVI 220 (310)
T ss_dssp ---------------------------------------------------------TTEEEECTTSCCCCTTTTTSSSC
T ss_pred ---------------------------------------------------------CCCeeeccccCCCCccCCccccc
Confidence 000157889999995321 1
Q ss_pred CCCCCcEEecCCcEEecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccc
Q 004301 499 ELLKPDMIAPGVNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAYVSY 578 (762)
Q Consensus 499 ~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~ 578 (762)
.+.||||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++.+||++|++||++++
T Consensus 221 ~~~~~di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 287 (310)
T 2ixt_A 221 QEGDIEISAPGSSVYSTWYNG-------------GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVD 287 (310)
T ss_dssp CTTCCCEEEECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSC
T ss_pred cCCCeeEECCCCCEeeecCCC-------------CEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC
Confidence 345999999999999998764 7999999999999999999999999999999999999999999876
Q ss_pred cCCcccccccCCCCCCCCCCCCCCcCc
Q 004301 579 KNGQKLQDIATGKASTPFDHGAGHVNP 605 (762)
Q Consensus 579 ~~g~~~~~~~~~~~~~~~~~G~G~vd~ 605 (762)
..+. ....++.+..||||++|+
T Consensus 288 ~~~~-----~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 288 IKGG-----YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp CCBS-----TTCCSSSBTTTBTCBCCC
T ss_pred CCCC-----cccccCCccccccceeec
Confidence 4321 113566778999999986
No 18
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=3.3e-51 Score=432.52 Aligned_cols=264 Identities=23% Similarity=0.257 Sum_probs=209.6
Q ss_pred CCCC-CCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeeccccccccCCCCCCCCCCCC
Q 004301 126 SGSA-SEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYEATLGPIDESKESKS 204 (762)
Q Consensus 126 ~~~G-~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~ 204 (762)
.++| +||+|||||||||++||+|+++ ++..+++... .....
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~---------------------------~~~~~~~~~~-----------~~~~~ 44 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGA---------------------------DLTVLPTLAP-----------TAARS 44 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTC---------------------------EEEECCCSSC-----------CCCCT
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCC---------------------------eeecCcCCCC-----------CCCCC
Confidence 3578 7999999999999999999753 1111111111 01112
Q ss_pred CCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC--CCHHHHHHHHHHHHhCCCcEEEEccC
Q 004301 205 PRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG--CFSSDILAAIEQAIDDNVNVLSMSLG 282 (762)
Q Consensus 205 ~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~a~~~g~dVIn~SlG 282 (762)
..|.+||||||||||+|+..+ .+.||||+|+|+.+|++.+.+ .+..++++||+||++++++|||||||
T Consensus 45 d~~~~gHGT~VAGiiag~~~~----------~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G 114 (282)
T 3zxy_A 45 DGFMSAHGTHVASIIFGQPET----------SVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGG 114 (282)
T ss_dssp TCHHHHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred CCCCCCcccceeehhhccCCc----------eeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCc
Confidence 334679999999999997422 247999999999999986553 67778999999999999999999999
Q ss_pred CCC-CCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCCCccCCCCceEEecCCCCCCccceeEEcCCCcEEEeEeeecCC
Q 004301 283 GGT-SDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSYSLSNVAPWITTVGAGTLDRDFPAFVSLGNGQNYSGVSLYKGD 361 (762)
Q Consensus 283 ~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~g~s~~~~~ 361 (762)
... .......+..++..+.++|+++|+||||+|.....+++..|++|+|||.+.
T Consensus 115 ~~~~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~------------------------- 169 (282)
T 3zxy_A 115 ELTDFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDD------------------------- 169 (282)
T ss_dssp EEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECT-------------------------
T ss_pred cccccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcC-------------------------
Confidence 754 233345677788899999999999999999988888889999999998431
Q ss_pred CCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeecCCCCccccccCc
Q 004301 362 GLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANTESNGEELVADAH 441 (762)
Q Consensus 362 ~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~ 441 (762)
T Consensus 170 -------------------------------------------------------------------------------- 169 (282)
T 3zxy_A 170 -------------------------------------------------------------------------------- 169 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCC
Q 004301 442 LLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIAPGVNILAGWSGAVG 521 (762)
Q Consensus 442 ~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~ 521 (762)
.+.++.||+||+. ..||||+|||++|+++++.+
T Consensus 170 ----------------------------------------~~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~~-- 202 (282)
T 3zxy_A 170 ----------------------------------------HGHPLDFSNWGST-----YEQQGILAPGEDILGAKPGG-- 202 (282)
T ss_dssp ----------------------------------------TSCBCSSSCCCHH-----HHHHEEEEECSSEEEECTTS--
T ss_pred ----------------------------------------CCccccccCCCCC-----ccccceeccCcceeeecCCC--
Confidence 1256889999875 35889999999999998875
Q ss_pred CCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhC----CCCCHHHHHHHHHhcccccccCCcccccccCCCCCCCCC
Q 004301 522 PTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAH----PEWSPAAIRSALMTTAYVSYKNGQKLQDIATGKASTPFD 597 (762)
Q Consensus 522 ~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~----p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~ 597 (762)
.|..++|||||||||||++|||+|++ |.++|+|||++|++||++++. ..+.....
T Consensus 203 -----------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~----------~~~~~~~~ 261 (282)
T 3zxy_A 203 -----------GTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDD----------DAPEQARR 261 (282)
T ss_dssp -----------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC-----------------CGG
T ss_pred -----------ceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCC----------CCCCccCc
Confidence 79999999999999999999999874 789999999999999998743 22344558
Q ss_pred CCCCCcCccccCC
Q 004301 598 HGAGHVNPVSALN 610 (762)
Q Consensus 598 ~G~G~vd~~~A~~ 610 (762)
||+|+||+.+|++
T Consensus 262 ~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 262 CLAGRLNVSGAFT 274 (282)
T ss_dssp GTTCBCCHHHHHH
T ss_pred eeeeEeCHHHHHH
Confidence 9999999999986
No 19
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=7.1e-51 Score=437.30 Aligned_cols=271 Identities=31% Similarity=0.417 Sum_probs=221.1
Q ss_pred ccCCcC--CCCCCcCCCCCC--CcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeecccc
Q 004301 113 FLGLDK--SANLFPTSGSAS--EVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARG 188 (762)
Q Consensus 113 ~~g~~~--~~~~~~~~~~G~--Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~ 188 (762)
.|++.. +..+|..+ +|+ ||+|||||||||++||+|.++ +...++|..+
T Consensus 9 ~W~l~~i~~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~---------------------------~~~~~~~~~~ 60 (320)
T 2z30_A 9 PWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN---------------------------IAWCVSTLRG 60 (320)
T ss_dssp CHHHHHTTCGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG---------------------------EEEEEECGGG
T ss_pred CCChhhcChHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc---------------------------cccCccccCC
Confidence 455544 35689988 899 999999999999999999742 3333444332
Q ss_pred ccccCCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC-CCHHHHHHHHH
Q 004301 189 YEATLGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG-CFSSDILAAIE 267 (762)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~ 267 (762)
... ....+..|..||||||||||+|.. ++ .| +.||||+|+|+.+|+++..| +..+++++||+
T Consensus 61 ~~~--------~~~~~~~d~~gHGT~vAgiia~~~-n~---~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~ 123 (320)
T 2z30_A 61 KVS--------TKLRDCADQNGHGTHVIGTIAALN-ND---IG-----VVGVAPGVQIYSVRVLDARGSGSYSDIAIGIE 123 (320)
T ss_dssp CCB--------CCHHHHBCSSSHHHHHHHHHHCCS-SS---BS-----CCCSSTTCEEEEEECSCTTSEEEHHHHHHHHH
T ss_pred ccC--------CCCCCCCCCCCCHHHHHHHHHccc-CC---Cc-----eEeeCCCCEEEEEEeeCCCCCccHHHHHHHHH
Confidence 110 000123678999999999999972 11 12 37999999999999998777 77889999999
Q ss_pred HHHhC--------------------CCcEEEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCCCccCCCCc
Q 004301 268 QAIDD--------------------NVNVLSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSYSLSNVAPW 327 (762)
Q Consensus 268 ~a~~~--------------------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~ 327 (762)
||+++ +++|||||||.... ...+..++.++.++|++||+||||+|.....+++..|+
T Consensus 124 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~ 200 (320)
T 2z30_A 124 QAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD---DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPE 200 (320)
T ss_dssp HHHHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTT
T ss_pred HHHhCcccccccccccccccccccCCceEEEecCCCCCC---CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCC
Confidence 99987 99999999998542 35667777789999999999999999887888889999
Q ss_pred eEEecCCCCCCccceeEEcCCCcEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCc
Q 004301 328 ITTVGAGTLDRDFPAFVSLGNGQNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVN 407 (762)
Q Consensus 328 vitVgA~~~~~~~~~~~~~~~g~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~ 407 (762)
+|+|||++.
T Consensus 201 vi~Vga~~~----------------------------------------------------------------------- 209 (320)
T 2z30_A 201 VIAVGAIDS----------------------------------------------------------------------- 209 (320)
T ss_dssp EEEEEEECT-----------------------------------------------------------------------
T ss_pred eEEEEeeCC-----------------------------------------------------------------------
Confidence 999998431
Q ss_pred hhhhHHHHHHHcCceEEEEeecCCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeec
Q 004301 408 ARVQKGAVVKAAGGLGMVLANTESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAA 487 (762)
Q Consensus 408 ~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~ 487 (762)
.+.+++
T Consensus 210 --------------------------------------------------------------------------~~~~~~ 215 (320)
T 2z30_A 210 --------------------------------------------------------------------------NDNIAS 215 (320)
T ss_dssp --------------------------------------------------------------------------TSCBCT
T ss_pred --------------------------------------------------------------------------CCCcCc
Confidence 125788
Q ss_pred ccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhC---------
Q 004301 488 FSSRGPNSITPELLKPDMIAPGVNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAH--------- 558 (762)
Q Consensus 488 fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~--------- 558 (762)
||++|| +|+|||++|+++++.+ .|..++|||||||||||++|||+|++
T Consensus 216 ~S~~g~----------~v~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~ 272 (320)
T 2z30_A 216 FSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILP 272 (320)
T ss_dssp TSCSSC----------SEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCCCC----------CEEeCCCCeEEeccCC-------------CeEeccCHHHHHHHHHHHHHHHHHhchhhcccccc
Confidence 999997 7899999999998764 89999999999999999999999999
Q ss_pred ----CCCCHHHHHHHHHhcccccccCCcccccccCCCCCCCCCCCCCCcCccccCCC
Q 004301 559 ----PEWSPAAIRSALMTTAYVSYKNGQKLQDIATGKASTPFDHGAGHVNPVSALNP 611 (762)
Q Consensus 559 ----p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 611 (762)
|.|++.+||++|++||+++.. +..+..||||+||+.+|++.
T Consensus 273 ~~~~p~lt~~~v~~~L~~ta~~~~~------------~g~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 273 VGTFDDISKNTVRGILHITADDLGP------------TGWDADYGYGVVRAALAVQA 317 (320)
T ss_dssp CCCTTCCSTTSHHHHHHHHSBCCSS------------SSSBTTTBTCBCCHHHHHHH
T ss_pred cccCCCCCHHHHHHHHHhhCccCCC------------CCCCCCcCCceeCHHHHHHH
Confidence 999999999999999998732 33456899999999999863
No 20
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=2e-50 Score=439.35 Aligned_cols=277 Identities=20% Similarity=0.118 Sum_probs=220.4
Q ss_pred ccCCcC--CCCCCcCCCCCC--CcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeecccc
Q 004301 113 FLGLDK--SANLFPTSGSAS--EVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARG 188 (762)
Q Consensus 113 ~~g~~~--~~~~~~~~~~G~--Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~ 188 (762)
.|++.. +..+|.. .+|+ ||+||||||||| +||+|.++ ++..++|..+
T Consensus 24 ~W~l~~i~~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~---------------------------~~~~~~~~~~ 74 (347)
T 2iy9_A 24 PWYFDAIGLTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS---------------------------EFAKFSFTQD 74 (347)
T ss_dssp CHHHHHHTCCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC---------------------------EEEEEECBTT
T ss_pred CcchhhCChHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC---------------------------cccCCcccCC
Confidence 355443 3568987 8999 999999999999 99999753 3334444432
Q ss_pred ccccCCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCCCCHHHHHHHHHH
Q 004301 189 YEATLGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGGCFSSDILAAIEQ 268 (762)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~ 268 (762)
.. +.+...+.|..||||||||||+|+ .| +.||||+|+|+.+|++++.+.. ++++||+|
T Consensus 75 ~~--------~~~~~~~~d~~gHGT~vAgiia~~-------~g-----~~GvAp~a~l~~~~v~~~~~~~--~~~~ai~~ 132 (347)
T 2iy9_A 75 GS--------PFPVKKSEALYIHGTAMASLIASR-------YG-----IYGVYPHALISSRRVIPDGVQD--SWIRAIES 132 (347)
T ss_dssp CC--------SSCCSSSHHHHHHHHHHHHHHHCS-------SS-----SCCSSTTCEEEEEECCSSBCTT--HHHHHHHH
T ss_pred CC--------CCCCCCCCCCCCcHHHHHHHHhcc-------cC-----CcccCCCCEEEEEEEecCCCHH--HHHHHHHH
Confidence 10 111124567889999999999997 12 2799999999999999775533 99999999
Q ss_pred HHhC------CCcEEEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCC-------CCCccCCCC---------
Q 004301 269 AIDD------NVNVLSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPS-------SYSLSNVAP--------- 326 (762)
Q Consensus 269 a~~~------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~-------~~~~~~~~p--------- 326 (762)
|+++ |++|||||||........+.+..++.++.++|++||+||||+|.. ...+++..+
T Consensus 133 a~~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~ 212 (347)
T 2iy9_A 133 IMSNVFLAPGEEKIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQ 212 (347)
T ss_dssp HHTCTTSCTTEEEEEEESSCBCCC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHT
T ss_pred HHhhhhcccCCceEEEeccccCCCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCcccccccccc
Confidence 9999 999999999976544456778888889999999999999999975 346677778
Q ss_pred -ceEEecCCCC--CCccceeEEcCCCcEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEe
Q 004301 327 -WITTVGAGTL--DRDFPAFVSLGNGQNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCD 403 (762)
Q Consensus 327 -~vitVgA~~~--~~~~~~~~~~~~g~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~ 403 (762)
++|+|||++. +...
T Consensus 213 ~~vi~Vga~~~~~~g~~--------------------------------------------------------------- 229 (347)
T 2iy9_A 213 DPVIRVAALAQYRKGET--------------------------------------------------------------- 229 (347)
T ss_dssp CCEEEEEEECCCCTTSC---------------------------------------------------------------
T ss_pred CCEEEEEEcccCCCCce---------------------------------------------------------------
Confidence 9999998643 1110
Q ss_pred CCCchhhhHHHHHHHcCceEEEEeecCCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCC
Q 004301 404 RGVNARVQKGAVVKAAGGLGMVLANTESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSP 483 (762)
Q Consensus 404 ~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~ 483 (762)
....+
T Consensus 230 ---------------------------------------------------------------------------~~~~~ 234 (347)
T 2iy9_A 230 ---------------------------------------------------------------------------PVLHG 234 (347)
T ss_dssp ---------------------------------------------------------------------------CCBCC
T ss_pred ---------------------------------------------------------------------------ecccC
Confidence 00011
Q ss_pred eeecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCH
Q 004301 484 VVAAFSSRGPNSITPELLKPDMIAPGVNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSP 563 (762)
Q Consensus 484 ~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp 563 (762)
.+++||++||+ ||||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++
T Consensus 235 ~~~~fS~~G~~-------~~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~ 294 (347)
T 2iy9_A 235 GGITGSRFGNN-------WVDIAAPGQNITFLRPDA-------------KTGTGSGTSEATAIVSGVLAAMTSCNPRATA 294 (347)
T ss_dssp CSSSCBCBCTT-------TCSEEEECSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHCTTSCH
T ss_pred CCCCCCCCCCC-------CCEEEeCCCCeEeecCCC-------------CeEeccchHHHHHHHHHHHHHHHHhCCCCCH
Confidence 45799999995 679999999999998864 7999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccccCCcccccccCCCCCCCCCCCCCCcCccccCCC
Q 004301 564 AAIRSALMTTAYVSYKNGQKLQDIATGKASTPFDHGAGHVNPVSALNP 611 (762)
Q Consensus 564 ~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 611 (762)
.+||++|++||+++...+ ...||+|+||+.+|++.
T Consensus 295 ~~v~~~L~~tA~~~~~~~-------------~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 295 TELKRTLLESADKYPSLV-------------DKVTEGRVLNAEKAISM 329 (347)
T ss_dssp HHHHHHHHHHSEECGGGT-------------TTSGGGEECCHHHHHHH
T ss_pred HHHHHHHHHhCccCCCCC-------------CccccCCEecHHHHHHH
Confidence 999999999999875321 24899999999999983
No 21
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=1.7e-50 Score=432.57 Aligned_cols=270 Identities=25% Similarity=0.290 Sum_probs=216.3
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeeccccccccCCCCCCC
Q 004301 120 ANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYEATLGPIDES 199 (762)
Q Consensus 120 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 199 (762)
+++|+....++||+|||||||||++||+|.++ .+.+..++..+.
T Consensus 11 ~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~~~---------- 54 (306)
T 4h6w_A 11 KKLWSETRGDPKICVAVLDGIVDQNHPCFIGA--------------------------DLTRLPSLVSGE---------- 54 (306)
T ss_dssp HHHHHHCSCCTTCEEEEESSCCCTTSGGGTTC--------------------------EEEECC----------------
T ss_pred HHHHhhhCCCCCCEEEEEcCCCCCCChhHcCC--------------------------cccCCCcccCCC----------
Confidence 45899888779999999999999999999753 122222222221
Q ss_pred CCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC--CCHHHHHHHHHHHHhCCCcEE
Q 004301 200 KESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG--CFSSDILAAIEQAIDDNVNVL 277 (762)
Q Consensus 200 ~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~a~~~g~dVI 277 (762)
.....|.+||||||||||+|+... .+.||||+|+|+++|++.+.+ ....++++||+||+++|++||
T Consensus 55 --~~~~~d~~gHGThVAGiiag~~~~----------~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi 122 (306)
T 4h6w_A 55 --ANANGSMSTHGTHVASIIFGQHDS----------PVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANII 122 (306)
T ss_dssp ------CCCCHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred --CCCCCCCCCchHHHHHHHHccccC----------CcceeccccccceeeccccccccchHHHHHHHHHHhhcccceee
Confidence 112446789999999999997421 248999999999999997653 677889999999999999999
Q ss_pred EEccCCCC-CCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCCCccCCCCceEEecCCCCCCccceeEEcCCCcEEEeEe
Q 004301 278 SMSLGGGT-SDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSYSLSNVAPWITTVGAGTLDRDFPAFVSLGNGQNYSGVS 356 (762)
Q Consensus 278 n~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~g~s 356 (762)
|+|||... .......+..++..+.++|+++|+||||+|.....+++..+++|+|||++.
T Consensus 123 ~~s~g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~-------------------- 182 (306)
T 4h6w_A 123 NVSAGQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDD-------------------- 182 (306)
T ss_dssp EECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECT--------------------
T ss_pred eccccccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecC--------------------
Confidence 99999643 233445677788899999999999999999888888888899999998432
Q ss_pred eecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeecCCCCccc
Q 004301 357 LYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANTESNGEEL 436 (762)
Q Consensus 357 ~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~ 436 (762)
T Consensus 183 -------------------------------------------------------------------------------- 182 (306)
T 4h6w_A 183 -------------------------------------------------------------------------------- 182 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEEecCCcEEecc
Q 004301 437 VADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIAPGVNILAGW 516 (762)
Q Consensus 437 ~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~ 516 (762)
.+.+++||++|+. ..||||+|||++|++++
T Consensus 183 ---------------------------------------------~~~~~~~s~~g~~-----~~~~di~APG~~i~s~~ 212 (306)
T 4h6w_A 183 ---------------------------------------------QGKPVDFSNWGDA-----YQKQGILAPGKDILGAK 212 (306)
T ss_dssp ---------------------------------------------TSCBCSSSCBCHH-----HHHHEEEEECSSEEEEC
T ss_pred ---------------------------------------------CCCccccccccCC-----cCcceeecCCcCccccc
Confidence 1256789999974 35889999999999998
Q ss_pred cCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhh----CCCCCHHHHHHHHHhcccccccCCcccccccCCCC
Q 004301 517 SGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAA----HPEWSPAAIRSALMTTAYVSYKNGQKLQDIATGKA 592 (762)
Q Consensus 517 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~ 592 (762)
+.+ .|..++|||||||||||++|||+++ +|.|+|+|||++|++||+++...+ .
T Consensus 213 ~~~-------------~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~----------~ 269 (306)
T 4h6w_A 213 PNG-------------GTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD----------T 269 (306)
T ss_dssp TTS-------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT----------C
T ss_pred CCC-------------ceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC----------C
Confidence 875 7999999999999999999999864 699999999999999999875322 1
Q ss_pred CCCCCCCCCCcCccccCC
Q 004301 593 STPFDHGAGHVNPVSALN 610 (762)
Q Consensus 593 ~~~~~~G~G~vd~~~A~~ 610 (762)
.....||+|+||+.+|++
T Consensus 270 ~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 270 DDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp SCGGGGTTCBCCHHHHHH
T ss_pred CCCCCcceeecCHHHHHH
Confidence 223479999999999997
No 22
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=2.4e-49 Score=429.91 Aligned_cols=303 Identities=24% Similarity=0.324 Sum_probs=220.7
Q ss_pred CCCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeeccccccccCCCCCC
Q 004301 119 SANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYEATLGPIDE 198 (762)
Q Consensus 119 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 198 (762)
+..+|..+++|+||+||||||||+ +||+|.++-.. .|+-......................+.+.+.. ...
T Consensus 21 ~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~----~~~ 91 (340)
T 3lpc_A 21 ADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVLP----GYDFISNSQISLDGDGRDADPFDEGDWFDNWAC----GGR 91 (340)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBCC----CEECCCCHHHHCSSSSSBSCCBCCCCCBCTTTT----SCT
T ss_pred HHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccccc----CccccCCccccccCCCccCCccccccccccccc----cCC
Confidence 356999999999999999999998 99999864111 111000000000000000000000000000000 001
Q ss_pred CCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCCCCHHHHHHHHHHHHh-------
Q 004301 199 SKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGGCFSSDILAAIEQAID------- 271 (762)
Q Consensus 199 ~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~------- 271 (762)
+.+.....|..||||||||||+|...+..+ +.||||+|+|+.+|+++..++..+++++||+||++
T Consensus 92 ~~~~~~~~d~~gHGT~vAgiia~~~~~~~g--------~~GvAp~a~l~~~~v~~~~~~~~~~~~~ai~~a~~~~~~~~~ 163 (340)
T 3lpc_A 92 PDPRKERSDSSWHGSHVAGTIAAVTNNRIG--------VAGVAYGAKVVPVRALGRCGGYDSDISDGLYWAAGGRIAGIP 163 (340)
T ss_dssp TCGGGSCBCCCCHHHHHHHHHHCCCSSSSS--------CCCTTTTSEEEEEECCBTTBCCHHHHHHHHHHHHTCCCTTSC
T ss_pred CCcccCCCCCCCCHHHHHHHHHccCCCCCc--------ceeecCCCEEEEEEEecCCCCcHHHHHHHHHHHhcccccccc
Confidence 122234578899999999999998654332 37999999999999998888889999999999998
Q ss_pred ---CCCcEEEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCC-CccCCCCceEEecCCCCCCccceeEEcC
Q 004301 272 ---DNVNVLSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSY-SLSNVAPWITTVGAGTLDRDFPAFVSLG 347 (762)
Q Consensus 272 ---~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~ 347 (762)
.+++|||||||.... ....+..++.++.++|++||+||||+|.... .+++..+++|+|||++.
T Consensus 164 ~~~~~~~Vin~S~G~~~~--~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~----------- 230 (340)
T 3lpc_A 164 ENRNPAKVINMSLGSDGQ--CSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTS----------- 230 (340)
T ss_dssp CCSSCCSEEEECCCEESC--CCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECT-----------
T ss_pred cccCCCeEEEeCcCCCCC--cchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCC-----------
Confidence 899999999997432 2345667777899999999999999997654 46778899999998431
Q ss_pred CCcEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEe
Q 004301 348 NGQNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLA 427 (762)
Q Consensus 348 ~g~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~ 427 (762)
T Consensus 231 -------------------------------------------------------------------------------- 230 (340)
T 3lpc_A 231 -------------------------------------------------------------------------------- 230 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecCCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEEe
Q 004301 428 NTESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIA 507 (762)
Q Consensus 428 n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~A 507 (762)
.+.++.||++|| ||||+|
T Consensus 231 ------------------------------------------------------~~~~~~~S~~g~--------~~di~A 248 (340)
T 3lpc_A 231 ------------------------------------------------------RGIRASFSNYGV--------DVDLAA 248 (340)
T ss_dssp ------------------------------------------------------TSSBCTTCCBST--------TCCEEE
T ss_pred ------------------------------------------------------CCCcCCCCCCCC--------CceEEe
Confidence 126789999998 459999
Q ss_pred cCCcEEecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhh-C---CCCCHHHHHHHHHhcccccccCCcc
Q 004301 508 PGVNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAA-H---PEWSPAAIRSALMTTAYVSYKNGQK 583 (762)
Q Consensus 508 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-~---p~~sp~~ik~~L~~TA~~~~~~g~~ 583 (762)
||++|+++++..... .....|..++|||||||||||++|||+|+ + |.+++++||++|++||+++..
T Consensus 249 pG~~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~~---- 318 (340)
T 3lpc_A 249 PGQDILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNG---- 318 (340)
T ss_dssp ECSSEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSS----
T ss_pred cCCCeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCC----
Confidence 999999998765321 11236999999999999999999999998 5 999999999999999998741
Q ss_pred cccccCCCCCCCCCCCCCCcCccccCCCC
Q 004301 584 LQDIATGKASTPFDHGAGHVNPVSALNPG 612 (762)
Q Consensus 584 ~~~~~~~~~~~~~~~G~G~vd~~~A~~~~ 612 (762)
.....||||+||+.+|++..
T Consensus 319 ---------~~~~~~G~G~vd~~~Av~~~ 338 (340)
T 3lpc_A 319 ---------RLDRALGSGIVDAEAAVNSV 338 (340)
T ss_dssp ---------CCSSCCCSSBCCHHHHHHHH
T ss_pred ---------CCCCCcccceecHHHHHHHH
Confidence 23458999999999998743
No 23
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=1.6e-48 Score=436.81 Aligned_cols=291 Identities=26% Similarity=0.313 Sum_probs=223.0
Q ss_pred CCCCc-CCCCCCCcEEEEEcccCCC------CCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeecccccccc
Q 004301 120 ANLFP-TSGSASEVIVGVLDTGVWP------ESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYEAT 192 (762)
Q Consensus 120 ~~~~~-~~~~G~Gv~VgVIDtGid~------~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~ 192 (762)
+.+|. .+++|+||+|||||||||+ .||+|.++ ++..++|...
T Consensus 11 ~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~---------------------------i~~~~~~~~~---- 59 (434)
T 1wmd_A 11 DVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK---------------------------ITALYALGRT---- 59 (434)
T ss_dssp HHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC---------------------------EEEEEETTTT----
T ss_pred hhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCC---------------------------EeeeccccCC----
Confidence 45887 7999999999999999999 79999642 3333444321
Q ss_pred CCCCCCCCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCCC---CHHHHHHHHHHH
Q 004301 193 LGPIDESKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGGC---FSSDILAAIEQA 269 (762)
Q Consensus 193 ~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~---~~~~i~~ai~~a 269 (762)
..+.|..||||||||||+|+.. .+.||||+|+|+.+|+++..|. ...++.++|++|
T Consensus 60 ----------~~~~d~~gHGT~VAgiiag~g~-----------~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a 118 (434)
T 1wmd_A 60 ----------NNANDTNGHGTHVAGSVLGNGS-----------TNKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQA 118 (434)
T ss_dssp ----------TCCCCSSSHHHHHHHHHHCCSS-----------SSCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHH
T ss_pred ----------CCCCCCCCcHHHHHHHHHcCCC-----------CceeeCCCCEEEEEEeecCCCccccccHHHHHHHHHH
Confidence 2367889999999999998631 1379999999999999987663 456899999999
Q ss_pred HhCCCcEEEEccCCCCCCCcccHHHHHHHHH-HhcCCEEEEecCCCCCCC--CCccCCCCceEEecCCCCCCccceeEEc
Q 004301 270 IDDNVNVLSMSLGGGTSDYYKDSVAIGAFAA-MEKGILVSCSAGNAGPSS--YSLSNVAPWITTVGAGTLDRDFPAFVSL 346 (762)
Q Consensus 270 ~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~g~~~--~~~~~~~p~vitVgA~~~~~~~~~~~~~ 346 (762)
+++|++|||||||......+ +....++.++ .++|+++|+||||+|... ...++.++++|+|||++..+....
T Consensus 119 ~~~g~~Vin~S~G~~~~~~~-~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~~---- 193 (434)
T 1wmd_A 119 YSAGARIHTNSWGAAVNGAY-TTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSFG---- 193 (434)
T ss_dssp HHTTCSEEEECCCBCCTTCC-CHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGGC----
T ss_pred HhcCCeEEEecCCCCcCCcC-CHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCcccC----
Confidence 99999999999998652222 2334444444 589999999999999764 356778899999999654321000
Q ss_pred CCCcEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEE
Q 004301 347 GNGQNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVL 426 (762)
Q Consensus 347 ~~g~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~ 426 (762)
.
T Consensus 194 --------------------------------------------------------------------------~----- 194 (434)
T 1wmd_A 194 --------------------------------------------------------------------------S----- 194 (434)
T ss_dssp --------------------------------------------------------------------------G-----
T ss_pred --------------------------------------------------------------------------c-----
Confidence 0
Q ss_pred eecCCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEE
Q 004301 427 ANTESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMI 506 (762)
Q Consensus 427 ~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~ 506 (762)
.....+.+++||++||+.+ +++||||+
T Consensus 195 ---------------------------------------------------~~~~~~~~a~fS~~G~~~~--g~~kpdi~ 221 (434)
T 1wmd_A 195 ---------------------------------------------------YADNINHVAQFSSRGPTKD--GRIKPDVM 221 (434)
T ss_dssp ---------------------------------------------------GGSCTTSBCTTSCCCCCTT--SCCCCCEE
T ss_pred ---------------------------------------------------ccCCCCccccccCCCCCCC--CCCCceEE
Confidence 0012347899999999986 89999999
Q ss_pred ecCCcEEecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCC-----CHHHHHHHHHhcccccccCC
Q 004301 507 APGVNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEW-----SPAAIRSALMTTAYVSYKNG 581 (762)
Q Consensus 507 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~-----sp~~ik~~L~~TA~~~~~~g 581 (762)
|||++|+++++........ .......|..++|||||||||||++|||+|++|++ ++++||++|++||+++.
T Consensus 222 ApG~~i~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~--- 297 (434)
T 1wmd_A 222 APGTFILSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIG--- 297 (434)
T ss_dssp EECSSEEEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCS---
T ss_pred cCCCCeEecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccC---
Confidence 9999999998643110000 00012479999999999999999999999998875 89999999999998752
Q ss_pred cccccccCCCCCCCCCCCCCCcCccccCCCC
Q 004301 582 QKLQDIATGKASTPFDHGAGHVNPVSALNPG 612 (762)
Q Consensus 582 ~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~ 612 (762)
..++.+.||||++|+.+|++..
T Consensus 298 ---------~~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 298 ---------LGYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp ---------SCSSCTTTTTCBCCHHHHHTCE
T ss_pred ---------CCCCCccCCcCeEeHHHhcccc
Confidence 2345679999999999999754
No 24
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=4e-48 Score=407.88 Aligned_cols=235 Identities=28% Similarity=0.421 Sum_probs=200.5
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeeccccccccCCCCCCC
Q 004301 120 ANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYEATLGPIDES 199 (762)
Q Consensus 120 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 199 (762)
..+|..+++|+||+|||||||||++||+|.++ ++..++|....
T Consensus 19 ~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~~~---------- 61 (284)
T 1sh7_A 19 DRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR---------------------------SVSGYDFVDND---------- 61 (284)
T ss_dssp CSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC---------------------------EEEEEETTTTB----------
T ss_pred hhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC---------------------------ccccccccCCC----------
Confidence 45899999999999999999999999999753 33334444321
Q ss_pred CCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC-CCHHHHHHHHHHHHhC--CCcE
Q 004301 200 KESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG-CFSSDILAAIEQAIDD--NVNV 276 (762)
Q Consensus 200 ~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~--g~dV 276 (762)
.++.|..||||||||||+|+. .||||+|+|+.+|++++.+ ++.+++++||+|++++ +++|
T Consensus 62 ---~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~~~V 124 (284)
T 1sh7_A 62 ---ADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASGPSV 124 (284)
T ss_dssp ---SCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCSSEE
T ss_pred ---CCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCCCcE
Confidence 236788999999999999873 6999999999999998876 7888999999999984 7999
Q ss_pred EEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCC-CccCCCCceEEecCCCCCCccceeEEcCCCcEEEeE
Q 004301 277 LSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSY-SLSNVAPWITTVGAGTLDRDFPAFVSLGNGQNYSGV 355 (762)
Q Consensus 277 In~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~g~ 355 (762)
||||||... ...+..++.++.++|++||+||||+|.... .+++..|++|+|||++.
T Consensus 125 in~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------------- 181 (284)
T 1sh7_A 125 ANMSLGGGQ----STALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS------------------- 181 (284)
T ss_dssp EEECCCBSC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT-------------------
T ss_pred EEeCCCCCC----CHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC-------------------
Confidence 999999853 356777777899999999999999997653 55778899999998431
Q ss_pred eeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeecCCCCcc
Q 004301 356 SLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANTESNGEE 435 (762)
Q Consensus 356 s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~ 435 (762)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEEecCCcEEec
Q 004301 436 LVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIAPGVNILAG 515 (762)
Q Consensus 436 ~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa 515 (762)
.+.+++||++||.. ||+|||++|+++
T Consensus 182 ----------------------------------------------~~~~~~~S~~G~~~--------di~ApG~~i~s~ 207 (284)
T 1sh7_A 182 ----------------------------------------------SDSRSSFSNWGSCV--------DLFAPGSQIKSA 207 (284)
T ss_dssp ----------------------------------------------TSBBCTTCCBSTTC--------CEEEECSSEEEE
T ss_pred ----------------------------------------------CCCcCcccCCCCcc--------EEEeccCCeEEe
Confidence 12678999999965 999999999999
Q ss_pred ccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccc
Q 004301 516 WSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAYVSY 578 (762)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~ 578 (762)
++.+ .|..++|||||||||||++|||+|++|+++++|||++|++||++..
T Consensus 208 ~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 208 WYDG-------------GYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENK 257 (284)
T ss_dssp CTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred cCCC-------------CEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 8764 7999999999999999999999999999999999999999998763
No 25
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=5.1e-48 Score=462.60 Aligned_cols=355 Identities=21% Similarity=0.220 Sum_probs=246.0
Q ss_pred CCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC---CCHHHHHHHHHHHHh-----CCCcEE
Q 004301 206 RDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG---CFSSDILAAIEQAID-----DNVNVL 277 (762)
Q Consensus 206 ~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g---~~~~~i~~ai~~a~~-----~g~dVI 277 (762)
.|++||||||||||||.. ++. .+.||||+|+|+.+|+++..+ .+..+++.+|.+|++ +|++||
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~~--------g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVI 337 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SSR--------DVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVI 337 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SSS--------SSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCCCCcHHHHHHHHhcCC-CCC--------CceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEE
Confidence 478999999999999986 222 238999999999999997653 255678888888887 799999
Q ss_pred EEccCCCCCCCcccHHHHHHHHHH-hcCCEEEEecCCCCCCCCC--ccC--CCCceEEecCCCCCCccceeEEcCCCcEE
Q 004301 278 SMSLGGGTSDYYKDSVAIGAFAAM-EKGILVSCSAGNAGPSSYS--LSN--VAPWITTVGAGTLDRDFPAFVSLGNGQNY 352 (762)
Q Consensus 278 n~SlG~~~~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~g~~~~~--~~~--~~p~vitVgA~~~~~~~~~~~~~~~g~~~ 352 (762)
|||||........+.+..++.++. ++|++||+||||+|....+ +++ .++++|+|||++...........
T Consensus 338 NmS~G~~~~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~------ 411 (1354)
T 3lxu_X 338 NMSYGEHANWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM------ 411 (1354)
T ss_dssp EECCCCCCSCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC----------
T ss_pred EcCCccCCCCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc------
Confidence 999999764344566777777776 8999999999999986543 455 38999999997543321000000
Q ss_pred EeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeecCCC
Q 004301 353 SGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANTESN 432 (762)
Q Consensus 353 ~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~ 432 (762)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEEecCCcE
Q 004301 433 GEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIAPGVNI 512 (762)
Q Consensus 433 ~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I 512 (762)
.....+.+++|||+||+.+ +++||||+|||++|
T Consensus 412 ---------------------------------------------~~~~~g~~asFSS~GPt~d--g~~KpDIaAPG~~I 444 (1354)
T 3lxu_X 412 ---------------------------------------------REKLPGNVYTWTSRDPCID--GGQGVTVCAPGGAI 444 (1354)
T ss_dssp ---------------------------------------------------CCCCCCCCSCCSS--SSCCEEEEEEC---
T ss_pred ---------------------------------------------ccCCCCccccccCCCCCcc--CCCcceEEecCceE
Confidence 0011237899999999986 89999999999999
Q ss_pred EecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHh----hCCCCCHHHHHHHHHhcccccccCCccccccc
Q 004301 513 LAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKA----AHPEWSPAAIRSALMTTAYVSYKNGQKLQDIA 588 (762)
Q Consensus 513 ~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~----~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~ 588 (762)
+++..... ..|..++|||||||||||++|||++ ++|.|++.+||++|++||+++..
T Consensus 445 ~St~~~~~-----------~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~--------- 504 (1354)
T 3lxu_X 445 ASVPQFTM-----------SKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY--------- 504 (1354)
T ss_dssp -----------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT---------
T ss_pred EEeecCCC-----------CceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC---------
Confidence 99755321 2789999999999999999999986 79999999999999999998742
Q ss_pred CCCCCCCCCCCCCCcCccccCCCCeeecCCcchhhhhccccCCC-ccccccccccccccCCCcCCCCCCccCCceeeecc
Q 004301 589 TGKASTPFDHGAGHVNPVSALNPGLVYDLTVDDYLGFLCALNYT-ASQINSLARRKFTCDASKRYSLADFNYPSFAVNIE 667 (762)
Q Consensus 589 ~~~~~~~~~~G~G~vd~~~A~~~~lv~d~~~~~y~~~~~~~~~~-~~~~~~~~~~~~~c~~~~~~~~~~ln~ps~~~~~~ 667 (762)
.+++.||||+||+.+|++..+.|+..+++|+.|+|..+.. ...|. .+ +...+...
T Consensus 505 ----~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgIy--lR--------------~~~~~~~~---- 560 (1354)
T 3lxu_X 505 ----VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGIH--LR--------------QGVQRNSI---- 560 (1354)
T ss_dssp ----SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSEE--EC--------------SSCCCSCE----
T ss_pred ----CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCCceE--Ee--------------ccccCCce----
Confidence 3446899999999999999999999999999999998753 22211 00 00000000
Q ss_pred ccccCCCcceEEEEEEEEecC---C----CceEEEEEeecCCCCeEEEEEcCeEEEeecCeeeEEEEEEEEecCCCCCeE
Q 004301 668 TAQSSSGSSVLKYTRSLTNVG---P----PGTYKVFITSSTGPGVKISVEPATLSFTQANEKKSYTVTFTVSSMPSNTNS 740 (762)
Q Consensus 668 ~~~~~~~~~~~~~~rtv~n~~---~----~~~y~~~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~ 740 (762)
. ..++|+-++.|.. . ...-++.+... .+ -|+ -|..|.+ .++.++|.|.+++..-+ .+..
T Consensus 561 -----~--~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t-~~--wv~-~p~~l~l--~~~~r~~~v~vDp~~L~-~G~h 626 (1354)
T 3lxu_X 561 -----D--YNVYIEPIFYNDKEADPKDKFNFNVRLNLIAS-QP--WVQ-CGAFLDL--SYGTRSIAVRVDPTGLQ-PGVH 626 (1354)
T ss_dssp -----E--EEEEEEEEESSCSCSSSTTCSCCCCEEEEEES-ST--TEE-ECSCEEC--TTSCEEEEEEECGGGCC-SEEE
T ss_pred -----E--EEEEEeeeecCcccCChhhccceEEEEEEecC-CC--cee-cccceee--cCCCceEEEEECCCCCC-Ccce
Confidence 0 1223333342211 1 12233444431 12 222 3777766 68899999999988543 3689
Q ss_pred EEEEEEEc-----CceEEEeEEEEE
Q 004301 741 FAHLEWSD-----GKYIVGSPIAIS 760 (762)
Q Consensus 741 ~G~i~~~~-----~~~~v~~P~~v~ 760 (762)
+++|..-| ....-|+||.|.
T Consensus 627 ~~~v~~~D~~~~~~gp~f~ipvTv~ 651 (1354)
T 3lxu_X 627 SAVIRAYDTDCVQKGSLFEIPVTVV 651 (1354)
T ss_dssp EEEEEEEESSCTTSCCSEEEEEEEE
T ss_pred eEEEEEEEcCCcccCceEEeeEEEE
Confidence 99998875 358899999775
No 26
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=7.2e-48 Score=404.89 Aligned_cols=240 Identities=32% Similarity=0.414 Sum_probs=201.9
Q ss_pred CCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeeccccccccCCCCCCCCC
Q 004301 122 LFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYEATLGPIDESKE 201 (762)
Q Consensus 122 ~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~ 201 (762)
.|. ..+|+||+|+|||||||++||+|.++ +...++|..
T Consensus 24 ~~~-~~~G~gv~VaViDsGvd~~H~~l~~~---------------------------~~~~~~~~~-------------- 61 (279)
T 2pwa_A 24 YYD-ESAGQGSCVYVIDTGIEASHPEFEGR---------------------------AQMVKTYYY-------------- 61 (279)
T ss_dssp ECC-TTTTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEESSS--------------
T ss_pred ccc-CCCCCCCEEEEEeCCCCCCChhHhCc---------------------------cccccCCCC--------------
Confidence 344 37899999999999999999999753 233333331
Q ss_pred CCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC-CCHHHHHHHHHHHHhCCC------
Q 004301 202 SKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG-CFSSDILAAIEQAIDDNV------ 274 (762)
Q Consensus 202 ~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~------ 274 (762)
++.|..||||||||||+|+. .||||+|+|+.+|++++.+ ++.+++++||+|++++++
T Consensus 62 --~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~ 125 (279)
T 2pwa_A 62 --SSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPK 125 (279)
T ss_dssp --CSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTT
T ss_pred --CCCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccCCC
Confidence 25678999999999999872 6999999999999998877 788999999999999887
Q ss_pred -cEEEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCC-CccCCCCceEEecCCCCCCccceeEEcCCCcEE
Q 004301 275 -NVLSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSY-SLSNVAPWITTVGAGTLDRDFPAFVSLGNGQNY 352 (762)
Q Consensus 275 -dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~ 352 (762)
+|||||||... .+.+..++.++.++|++||+||||+|.... .+++..|++|+|||++.
T Consensus 126 ~~Vin~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------------- 185 (279)
T 2pwa_A 126 GVVASLSLGGGY----SSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDR---------------- 185 (279)
T ss_dssp EEEEEECCCEEC----CHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----------------
T ss_pred ccEEEecCCCCC----CHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecC----------------
Confidence 99999999743 456777778899999999999999998653 45778899999998431
Q ss_pred EeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeecCCC
Q 004301 353 SGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANTESN 432 (762)
Q Consensus 353 ~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~ 432 (762)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 2pwa_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEEecCCcE
Q 004301 433 GEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIAPGVNI 512 (762)
Q Consensus 433 ~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I 512 (762)
.+.+++||++||.+ ||+|||++|
T Consensus 186 -------------------------------------------------~~~~~~~S~~G~~~--------di~APG~~i 208 (279)
T 2pwa_A 186 -------------------------------------------------YDRRSSFSNYGSVL--------DIFGPGTDI 208 (279)
T ss_dssp -------------------------------------------------TSBBCTTCCBSTTC--------CEEEECSSE
T ss_pred -------------------------------------------------CCCcCCcCCCCCcc--------eEEEecCCe
Confidence 12678999999964 999999999
Q ss_pred EecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccccCCcccccccCCCC
Q 004301 513 LAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAYVSYKNGQKLQDIATGKA 592 (762)
Q Consensus 513 ~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~ 592 (762)
+++++.+ .|..++|||||||||||++|||+|+ |++++.+||++|++||++...
T Consensus 209 ~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~------------- 261 (279)
T 2pwa_A 209 LSTWIGG-------------STRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDL------------- 261 (279)
T ss_dssp EEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCC-------------
T ss_pred EEeecCC-------------CEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccccc-------------
Confidence 9998865 7999999999999999999999999 999999999999999987531
Q ss_pred CCCCCCCCCCcCcc
Q 004301 593 STPFDHGAGHVNPV 606 (762)
Q Consensus 593 ~~~~~~G~G~vd~~ 606 (762)
..+|+|..|+.
T Consensus 262 ---~~~~~g~~n~l 272 (279)
T 2pwa_A 262 ---SNIPFGTVNLL 272 (279)
T ss_dssp ---BSCCTTSCCEE
T ss_pred ---CCCCCCCccEe
Confidence 15678887764
No 27
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=4.9e-47 Score=399.08 Aligned_cols=236 Identities=33% Similarity=0.429 Sum_probs=199.2
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeeccccccccCCCCCCC
Q 004301 120 ANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYEATLGPIDES 199 (762)
Q Consensus 120 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 199 (762)
..+|..+++|+||+|+|||||||++||+|.++ +...++|.++
T Consensus 21 ~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~---------------------------~~~~~d~~~~----------- 62 (278)
T 2b6n_A 21 DNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR---------------------------ASSGYDFIDN----------- 62 (278)
T ss_dssp CSEEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEETTTT-----------
T ss_pred chhcccCCCCCCCEEEEEeCCCCCCChhHhcc---------------------------cccCeecCCC-----------
Confidence 45799999999999999999999999999753 2333444332
Q ss_pred CCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC-CCHHHHHHHHHHHHh--CCCcE
Q 004301 200 KESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG-CFSSDILAAIEQAID--DNVNV 276 (762)
Q Consensus 200 ~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~--~g~dV 276 (762)
..++.|..||||||||||+|.. .||||+|+|+.+|++++.+ +..+++++||+|+++ .|++|
T Consensus 63 --~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g~~V 126 (278)
T 2b6n_A 63 --DYDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASGPAV 126 (278)
T ss_dssp --BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEE
T ss_pred --CCCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCCCeE
Confidence 1235788999999999999862 6999999999999998776 788899999999998 59999
Q ss_pred EEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCC-CccCCCCceEEecCCCCCCccceeEEcCCCcEEEeE
Q 004301 277 LSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSY-SLSNVAPWITTVGAGTLDRDFPAFVSLGNGQNYSGV 355 (762)
Q Consensus 277 In~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~g~ 355 (762)
||||||... .+.+..++.++.++|++||+||||+|.... .+++..|++|+|||++.
T Consensus 127 in~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------------- 183 (278)
T 2b6n_A 127 ANMSLGGGA----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS------------------- 183 (278)
T ss_dssp EEECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT-------------------
T ss_pred EEECCCCCc----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC-------------------
Confidence 999999854 356677777899999999999999997654 35778899999998421
Q ss_pred eeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeecCCCCcc
Q 004301 356 SLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANTESNGEE 435 (762)
Q Consensus 356 s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~ 435 (762)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEEecCCcEEec
Q 004301 436 LVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIAPGVNILAG 515 (762)
Q Consensus 436 ~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa 515 (762)
.+.++.||++||.. ||+|||++|+++
T Consensus 184 ----------------------------------------------~~~~~~~S~~G~~~--------di~ApG~~i~s~ 209 (278)
T 2b6n_A 184 ----------------------------------------------NDSRSSFSNYGTCL--------DIYAPGSSITSS 209 (278)
T ss_dssp ----------------------------------------------TSBBCTTCCBSTTC--------CEEEECSSEEEE
T ss_pred ----------------------------------------------CCCcCCcCCCCCCC--------eEEeCCCCeECc
Confidence 12578899999854 999999999999
Q ss_pred ccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccc
Q 004301 516 WSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAYVS 577 (762)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~ 577 (762)
++... ..|..++|||||||||||++|||+|++|+|++.|||++|++||++.
T Consensus 210 ~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 210 WYTSN-----------SATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp CTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred ccCCC-----------CCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 87532 2799999999999999999999999999999999999999999875
No 28
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=2e-47 Score=402.26 Aligned_cols=235 Identities=29% Similarity=0.430 Sum_probs=200.6
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeeccccccccCCCCCCC
Q 004301 120 ANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYEATLGPIDES 199 (762)
Q Consensus 120 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 199 (762)
..+|..+.+|+||+|||||||||++||+|.++ +...++|..+
T Consensus 21 ~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~~----------- 62 (276)
T 4dzt_A 21 SNSYTYTATGRGVNVYVIDTGIRTTHREFGGR---------------------------ARVGYDALGG----------- 62 (276)
T ss_dssp CSCEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEETTSS-----------
T ss_pred ccceecCCCCCCcEEEEEccCCCCCChhHccC---------------------------eeccccCCCC-----------
Confidence 46899999999999999999999999999753 2333333321
Q ss_pred CCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC-CCHHHHHHHHHHHHhC--CCcE
Q 004301 200 KESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG-CFSSDILAAIEQAIDD--NVNV 276 (762)
Q Consensus 200 ~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~--g~dV 276 (762)
.+.|..||||||||||+|.. .||||+|+|+.+|++++.+ +...++++|++|++++ +++|
T Consensus 63 ----~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~v 124 (276)
T 4dzt_A 63 ----NGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRRPAV 124 (276)
T ss_dssp ----CSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEE
T ss_pred ----CCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCCCeE
Confidence 35678899999999999873 6999999999999998876 7888999999999987 8999
Q ss_pred EEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCCC-ccCCCCceEEecCCCCCCccceeEEcCCCcEEEeE
Q 004301 277 LSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSYS-LSNVAPWITTVGAGTLDRDFPAFVSLGNGQNYSGV 355 (762)
Q Consensus 277 In~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~g~ 355 (762)
||||||... ...+..++.++.++|+++|+||||+|..... .++..+++|+|||++.
T Consensus 125 in~S~g~~~----~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------------- 181 (276)
T 4dzt_A 125 ANMSLGGGV----STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTS------------------- 181 (276)
T ss_dssp EEECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT-------------------
T ss_pred EEECCCCCC----CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECC-------------------
Confidence 999999743 4567777779999999999999999977544 3778899999998421
Q ss_pred eeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeecCCCCcc
Q 004301 356 SLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANTESNGEE 435 (762)
Q Consensus 356 s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~ 435 (762)
T Consensus 182 -------------------------------------------------------------------------------- 181 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------- 181 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEEecCCcEEec
Q 004301 436 LVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIAPGVNILAG 515 (762)
Q Consensus 436 ~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa 515 (762)
.+.+++||++||.. ||+|||++|+++
T Consensus 182 ----------------------------------------------~~~~~~~S~~g~~~--------dv~ApG~~i~s~ 207 (276)
T 4dzt_A 182 ----------------------------------------------SDARASFSNYGSCV--------DLFAPGASIPSA 207 (276)
T ss_dssp ----------------------------------------------TSBBCTTCCBSTTC--------CEEEECSSEEEE
T ss_pred ----------------------------------------------CCCcCCcCCCCCCc--------eEEeCCCCeEcc
Confidence 12678999999976 999999999999
Q ss_pred ccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccc
Q 004301 516 WSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAYVSY 578 (762)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~ 578 (762)
++... ..|..++|||||||+|||++|||+|++|++++++||++|++||++..
T Consensus 208 ~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 259 (276)
T 4dzt_A 208 WYTSD-----------TATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGR 259 (276)
T ss_dssp CTTSS-----------SCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred ccCCC-----------CceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCc
Confidence 87642 27999999999999999999999999999999999999999999864
No 29
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=2e-46 Score=435.57 Aligned_cols=297 Identities=22% Similarity=0.174 Sum_probs=202.2
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeeccccccccCCCCCCC
Q 004301 120 ANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYEATLGPIDES 199 (762)
Q Consensus 120 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 199 (762)
..+|..+++|+||+|||||||||++||+|.++- +.+.++|..+.
T Consensus 60 ~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~--------------------------~~~~~~~~~~~---------- 103 (600)
T 2oxa_A 60 WWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTGS---------- 103 (600)
T ss_dssp HHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTCS----------
T ss_pred HHHHhcCCCCCCcEEEEecCCcCCCCcchhhcc--------------------------ccCceeccCCC----------
Confidence 458999999999999999999999999997531 11122333221
Q ss_pred CCCCCCCC-CCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCCCCH--HHHHHHHHHHHhCCCcE
Q 004301 200 KESKSPRD-DDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGGCFS--SDILAAIEQAIDDNVNV 276 (762)
Q Consensus 200 ~~~~~~~D-~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~--~~i~~ai~~a~~~g~dV 276 (762)
.+..|.| .+||||||||||||. .++.. +.||||+|+|+.+|+++..+... ..+++....+..++++|
T Consensus 104 -~d~~p~d~~~gHGT~vAGiiaa~-~n~~g--------~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~~~V 173 (600)
T 2oxa_A 104 -DDPTPTDPDTGHGTSVSGIIAAV-DNAIG--------TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRV 173 (600)
T ss_dssp -SCCCCCSTTCCHHHHHHHHHHCC-SSSSS--------CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHTCSE
T ss_pred -CCCCCCCCCCCCccHHHHHhhcc-cCCCc--------ceEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccCCeE
Confidence 1122444 789999999999998 33222 38999999999999998776332 33444444477889999
Q ss_pred EEEccCCCCC-CCcc----cHHHHHHHH---HHhcCCEEEEecCCCCCCCC----------------------CccCCCC
Q 004301 277 LSMSLGGGTS-DYYK----DSVAIGAFA---AMEKGILVSCSAGNAGPSSY----------------------SLSNVAP 326 (762)
Q Consensus 277 In~SlG~~~~-~~~~----~~~~~a~~~---a~~~Gi~vV~AAGN~g~~~~----------------------~~~~~~p 326 (762)
||||||.... .... ..+..++.. +.++|++||+||||+|.... ..++.++
T Consensus 174 in~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s~ 253 (600)
T 2oxa_A 174 FNHSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNF 253 (600)
T ss_dssp EEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGSS
T ss_pred EEEeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcccCc
Confidence 9999998642 1111 222222222 44789999999999986421 1111233
Q ss_pred ceEEecCCCCCCccceeEEcCCCcEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCC
Q 004301 327 WITTVGAGTLDRDFPAFVSLGNGQNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGV 406 (762)
Q Consensus 327 ~vitVgA~~~~~~~~~~~~~~~g~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~ 406 (762)
|+|+|||+
T Consensus 254 ~vItVgA~------------------------------------------------------------------------ 261 (600)
T 2oxa_A 254 WNLVVSAL------------------------------------------------------------------------ 261 (600)
T ss_dssp SEEEEEEE------------------------------------------------------------------------
T ss_pred eeEEEecc------------------------------------------------------------------------
Confidence 45555542
Q ss_pred chhhhHHHHHHHcCceEEEEeecCCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeee
Q 004301 407 NARVQKGAVVKAAGGLGMVLANTESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVA 486 (762)
Q Consensus 407 ~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a 486 (762)
...+.++
T Consensus 262 -------------------------------------------------------------------------~~~g~~a 268 (600)
T 2oxa_A 262 -------------------------------------------------------------------------NADGVRS 268 (600)
T ss_dssp -------------------------------------------------------------------------CTTSSBC
T ss_pred -------------------------------------------------------------------------cCCCCcC
Confidence 2233688
Q ss_pred cccCCCCCCCCCCCCCCcEEecCCcEEecccC-------CC--CCC------------CCCCCCcccceeeeccccchhh
Q 004301 487 AFSSRGPNSITPELLKPDMIAPGVNILAGWSG-------AV--GPT------------GLATDSRRVSFNIISGTSMSCP 545 (762)
Q Consensus 487 ~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~-------~~--~~~------------~~~~~~~~~~y~~~sGTSmAaP 545 (762)
+||++||+. ||+|||++|.+..+. .. +.. ....+.....|..++|||||||
T Consensus 269 ~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP 340 (600)
T 2oxa_A 269 SYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATP 340 (600)
T ss_dssp TTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHH
T ss_pred CcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHHhH
Confidence 999999987 999999996544331 10 000 0000111234899999999999
Q ss_pred hHHHHHHHHHhhCCCCCHHHHHHHHHhcccccccCCcccc-----------------c--ccCCCCCCCCCCCCCCcCcc
Q 004301 546 HVSGLAALLKAAHPEWSPAAIRSALMTTAYVSYKNGQKLQ-----------------D--IATGKASTPFDHGAGHVNPV 606 (762)
Q Consensus 546 ~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g~~~~-----------------~--~~~~~~~~~~~~G~G~vd~~ 606 (762)
||||++|||+|++|+|+|++||++|++||++++..+.++. + ...........||||+||+.
T Consensus 341 ~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G~vda~ 420 (600)
T 2oxa_A 341 STSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVN 420 (600)
T ss_dssp HHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCchhhHH
Confidence 9999999999999999999999999999999865442211 0 00112223568999999999
Q ss_pred ccCCCCeee
Q 004301 607 SALNPGLVY 615 (762)
Q Consensus 607 ~A~~~~lv~ 615 (762)
+|++.+.-+
T Consensus 421 ~Av~~A~~~ 429 (600)
T 2oxa_A 421 KALELAANH 429 (600)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHHhc
Confidence 999855433
No 30
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=2.1e-46 Score=418.38 Aligned_cols=278 Identities=23% Similarity=0.251 Sum_probs=201.1
Q ss_pred CCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeeccccccccCCCCCCCCC
Q 004301 122 LFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYEATLGPIDESKE 201 (762)
Q Consensus 122 ~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~ 201 (762)
.|..+++|+||+|+|||||||++||+|.++- .....++.... ++ ...
T Consensus 18 aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~--------------------------~~~~~~~v~~~---dg----~~f 64 (546)
T 2qtw_B 18 EYQPPDGGSLVEVYLLDTSIQSDHREIEGRV--------------------------MVTDFENVPEE---DG----TRF 64 (546)
T ss_dssp ------CCTTSEEEEEESCCCTTSTTTTTTE--------------------------EEEEEECCCCC---C--------
T ss_pred hcccCCCCCCcEEEEECCCCCCCChHHcccc--------------------------cccCcccccCC---CC----ccc
Confidence 7888999999999999999999999997530 11111111000 00 000
Q ss_pred CCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC-CCHHHHHHHHHHHHhC------CC
Q 004301 202 SKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG-CFSSDILAAIEQAIDD------NV 274 (762)
Q Consensus 202 ~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~------g~ 274 (762)
...+.|..||||||||||+|+. .||||+|+|+.+|++++.| ++.+++++||+|++++ ++
T Consensus 65 ~~~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~ 130 (546)
T 2qtw_B 65 HRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGP 130 (546)
T ss_dssp ---CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSC
T ss_pred cCCCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCC
Confidence 1235688999999999999873 6999999999999998877 7788999999999984 89
Q ss_pred cEEEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCC-CccCCCCceEEecCCCCCCccceeEEcCCCcEEE
Q 004301 275 NVLSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSY-SLSNVAPWITTVGAGTLDRDFPAFVSLGNGQNYS 353 (762)
Q Consensus 275 dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~ 353 (762)
+|||||||+.. ...+..++.++.++|++||+||||+|.+.. .+++..|++|+|||++.+...
T Consensus 131 ~VINmSlGg~~----s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~------------- 193 (546)
T 2qtw_B 131 LVVLLPLAGGY----SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP------------- 193 (546)
T ss_dssp EEEEECEEEEC----CHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB-------------
T ss_pred eEEEecCCCCC----cHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc-------------
Confidence 99999999742 456777788999999999999999997653 457888999999986432210
Q ss_pred eEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeecCCCC
Q 004301 354 GVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANTESNG 433 (762)
Q Consensus 354 g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~ 433 (762)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEEecCCcEE
Q 004301 434 EELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIAPGVNIL 513 (762)
Q Consensus 434 ~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~ 513 (762)
...-..||++|+. |||+|||++|+
T Consensus 194 ------------------------------------------------a~~s~~fSn~G~~--------vDI~APG~~I~ 217 (546)
T 2qtw_B 194 ------------------------------------------------VTLGTLGTNFGRC--------VDLFAPGEDII 217 (546)
T ss_dssp ------------------------------------------------CEETTEECCBSTT--------CCEEEECSSEE
T ss_pred ------------------------------------------------ccccCCcCCCCCc--------ceEEecCccEE
Confidence 0000128999984 59999999999
Q ss_pred ecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccccCCcccc------cc
Q 004301 514 AGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAYVSYKNGQKLQ------DI 587 (762)
Q Consensus 514 sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g~~~~------~~ 587 (762)
++++... ..|..++|||||||||||++|||+|++|+|+|+|||++|++||.+..-....+. ..
T Consensus 218 St~~~~~-----------~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i~~~~~p~~~~~~tp 286 (546)
T 2qtw_B 218 GASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTP 286 (546)
T ss_dssp EECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCSCGGGSCHHHHTTSC
T ss_pred eeccCCC-----------CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCCccCccccCCCCc
Confidence 9987642 279999999999999999999999999999999999999999986432111000 00
Q ss_pred c--CCCCCCCCCCCCCC--cCccccCC
Q 004301 588 A--TGKASTPFDHGAGH--VNPVSALN 610 (762)
Q Consensus 588 ~--~~~~~~~~~~G~G~--vd~~~A~~ 610 (762)
. ...+.....+|+|+ .++..+..
T Consensus 287 N~l~~~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 287 NLVAALPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp CEECCCCCTTCC--CCCEEEEEECCCC
T ss_pred cchhccCCcccccCCCcchhchhccCC
Confidence 0 01122345678888 77777664
No 31
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=1.1e-46 Score=425.53 Aligned_cols=292 Identities=15% Similarity=0.135 Sum_probs=212.3
Q ss_pred CCCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeeccccccccCCCCCC
Q 004301 119 SANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYEATLGPIDE 198 (762)
Q Consensus 119 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 198 (762)
+..+|..+++|+||+|||||||||++||+|.++-. . ...++|..+. ..
T Consensus 27 ~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~------------~-------------~~~~d~~~~~-------~~ 74 (471)
T 1p8j_A 27 VKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD------------P-------------GASFDVNDQD-------PD 74 (471)
T ss_dssp CHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBC------------G-------------GGCEETTTTB-------SC
T ss_pred hHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccC------------c-------------cCcccccCCC-------CC
Confidence 34689999999999999999999999999975300 0 0112232221 11
Q ss_pred CCCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCCCCHHHHHHHHHHHHh-CCCcEE
Q 004301 199 SKESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGGCFSSDILAAIEQAID-DNVNVL 277 (762)
Q Consensus 199 ~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~-~g~dVI 277 (762)
+.+...+.|.+||||||||||||...++.+ +.||||+|+|+.+|+++ +..+++++|++++++ ++++||
T Consensus 75 p~~~~~~~d~~gHGT~vAGiiaa~~~n~~g--------~~GvAp~a~i~~~rv~~---g~~~~~~~ai~~a~~~~~~~Vi 143 (471)
T 1p8j_A 75 PQPRYTQMNDNRHGTRCAGEVAAVANNGVC--------GVGVAYNARIGGVRMLD---GEVTDAVEARSLGLNPNHIHIY 143 (471)
T ss_dssp CCCCCCTTCTTCHHHHHHHHHHCCSSSSSS--------CCCTTTTSEEEEEECSS---SCCCHHHHHHHHTSCTTTCCEE
T ss_pred CCCccCCCCCCCcHHHHHHHHHeeccCCCC--------CEEECCCCeEEEEEccC---CchhHHHHHHHhhhccCCCeEE
Confidence 111124568899999999999997544322 37999999999999985 346789999999999 999999
Q ss_pred EEccCCCCCC----CcccHHHHHHHHHHh-----cCCEEEEecCCCCCCCCC----ccCCCCceEEecCCCCCCccceeE
Q 004301 278 SMSLGGGTSD----YYKDSVAIGAFAAME-----KGILVSCSAGNAGPSSYS----LSNVAPWITTVGAGTLDRDFPAFV 344 (762)
Q Consensus 278 n~SlG~~~~~----~~~~~~~~a~~~a~~-----~Gi~vV~AAGN~g~~~~~----~~~~~p~vitVgA~~~~~~~~~~~ 344 (762)
|||||..... .....+..++.++.+ +|++||+||||+|..... ....++++|+|||++.
T Consensus 144 n~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~-------- 215 (471)
T 1p8j_A 144 SASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQ-------- 215 (471)
T ss_dssp EECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECT--------
T ss_pred EeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccC--------
Confidence 9999985421 112234444445543 699999999999976321 1234588999998432
Q ss_pred EcCCCcEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEE
Q 004301 345 SLGNGQNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGM 424 (762)
Q Consensus 345 ~~~~g~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~ 424 (762)
T Consensus 216 -------------------------------------------------------------------------------- 215 (471)
T 1p8j_A 216 -------------------------------------------------------------------------------- 215 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeecCCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCc
Q 004301 425 VLANTESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPD 504 (762)
Q Consensus 425 i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPD 504 (762)
.+.+++||++||... ...+|.
T Consensus 216 ---------------------------------------------------------~g~~a~~S~~g~~~~--~~~~~~ 236 (471)
T 1p8j_A 216 ---------------------------------------------------------FGNVPWYSEACSSTL--ATTYSS 236 (471)
T ss_dssp ---------------------------------------------------------TSCCCTTCCBCTTCC--EEEECC
T ss_pred ---------------------------------------------------------CCCcccccCCCCcce--EEeCCC
Confidence 125789999999875 233444
Q ss_pred EEecCCcEEecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccccCCccc
Q 004301 505 MIAPGVNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAYVSYKNGQKL 584 (762)
Q Consensus 505 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g~~~ 584 (762)
..+||..|+++.+.+ ..|..++|||||||||||++|||+|++|+|++++||++|++||++++......
T Consensus 237 ~~~~g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~ 304 (471)
T 1p8j_A 237 GNQNEKQIVTTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDW 304 (471)
T ss_dssp CSTTSCCEEEEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCC
T ss_pred CCCCCCCEEEeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCc
Confidence 444567899987643 36999999999999999999999999999999999999999999876432211
Q ss_pred ccccCCCCCCCCCCCCCCcCccccCCCCe
Q 004301 585 QDIATGKASTPFDHGAGHVNPVSALNPGL 613 (762)
Q Consensus 585 ~~~~~~~~~~~~~~G~G~vd~~~A~~~~l 613 (762)
.... ........||||+||+.+|++...
T Consensus 305 ~~n~-~g~~~~~~~G~G~vda~~Av~~a~ 332 (471)
T 1p8j_A 305 ATNG-VGRKVSHSYGYGLLDAGAMVALAQ 332 (471)
T ss_dssp EECT-TSCEEBTTTBTCBCCHHHHHHHHH
T ss_pred eecC-CCcccCCCCCCEEEcHhHHHHHhh
Confidence 1111 111234599999999999998543
No 32
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=1.2e-45 Score=389.26 Aligned_cols=228 Identities=33% Similarity=0.466 Sum_probs=193.8
Q ss_pred CCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeeccccccccCCCCCCCCC
Q 004301 122 LFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYEATLGPIDESKE 201 (762)
Q Consensus 122 ~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~ 201 (762)
+|... +|+||+|||||||||++||+|.++ +...++|..+
T Consensus 25 ~~~~~-~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~~------------- 63 (279)
T 3f7m_A 25 AYDTS-AGAGACVYVIDTGVEDTHPDFEGR---------------------------AKQIKSYAST------------- 63 (279)
T ss_dssp EECTT-TTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEECSSS-------------
T ss_pred eecCC-CCCCCEEEEEcCCCCCCChhhccc---------------------------cccccCCCCC-------------
Confidence 56555 899999999999999999999753 3333333322
Q ss_pred CCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC-CCHHHHHHHHHHHHhCC-------
Q 004301 202 SKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG-CFSSDILAAIEQAIDDN------- 273 (762)
Q Consensus 202 ~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g------- 273 (762)
..|.+||||||||||+|+. .||||+|+|+.+|++++.+ ++..++++||+|+++++
T Consensus 64 ---~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~ 126 (279)
T 3f7m_A 64 ---ARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPR 126 (279)
T ss_dssp ---SSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTT
T ss_pred ---CCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCC
Confidence 2378899999999999862 6999999999999998876 78889999999999976
Q ss_pred CcEEEEccCCCCCCCcccHHHHHHHHHHhcCCEEEEecCCCCCCCCC-ccCCCCceEEecCCCCCCccceeEEcCCCcEE
Q 004301 274 VNVLSMSLGGGTSDYYKDSVAIGAFAAMEKGILVSCSAGNAGPSSYS-LSNVAPWITTVGAGTLDRDFPAFVSLGNGQNY 352 (762)
Q Consensus 274 ~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~ 352 (762)
++|||||||.. ..+.+..++.++.++|++||+||||+|..... .++..|++|+|||++.
T Consensus 127 ~~Vin~S~g~~----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------------- 186 (279)
T 3f7m_A 127 RTVASMSLGGG----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDS---------------- 186 (279)
T ss_dssp EEEEEECCCEE----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----------------
T ss_pred CeEEEeCCCcC----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCC----------------
Confidence 89999999974 34677778889999999999999999977543 4778899999998421
Q ss_pred EeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeecCCC
Q 004301 353 SGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANTESN 432 (762)
Q Consensus 353 ~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~ 432 (762)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 3f7m_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEEecCCcE
Q 004301 433 GEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIAPGVNI 512 (762)
Q Consensus 433 ~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I 512 (762)
.+.+++||++||.. ||+|||++|
T Consensus 187 -------------------------------------------------~~~~~~~S~~g~~~--------di~ApG~~i 209 (279)
T 3f7m_A 187 -------------------------------------------------NDVRSTFSNYGRVV--------DIFAPGTSI 209 (279)
T ss_dssp -------------------------------------------------TSBBCTTCCBSTTC--------CEEEECSSE
T ss_pred -------------------------------------------------CCCCCCCCCCCCCC--------eEEECCCCe
Confidence 12678999999965 999999999
Q ss_pred EecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccc
Q 004301 513 LAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAYVSY 578 (762)
Q Consensus 513 ~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~ 578 (762)
+++++.+ .|..++|||||||+|||++|||+|++|. ++++||++|++||++..
T Consensus 210 ~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 210 TSTWIGG-------------RTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp EEECGGG-------------CEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESC
T ss_pred EeecCCC-------------CEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccc
Confidence 9998764 7899999999999999999999999999 99999999999998753
No 33
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=1.3e-45 Score=419.35 Aligned_cols=283 Identities=19% Similarity=0.206 Sum_probs=211.6
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeeccccccccCCCCCCC
Q 004301 120 ANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYEATLGPIDES 199 (762)
Q Consensus 120 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 199 (762)
..+|..+++|+||+|||||||||++||+|.++- +. .+.++|..+.
T Consensus 44 ~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~-------~~------------------~~~~d~~~~~---------- 88 (503)
T 2id4_A 44 LDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF-------CA------------------EGSWDFNDNT---------- 88 (503)
T ss_dssp HHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB-------CG------------------GGCEETTTTB----------
T ss_pred HHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc-------cc------------------cCcccCCCCC----------
Confidence 458999999999999999999999999998641 00 0122333221
Q ss_pred CCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCCCCHHHHHHHHHHHHhCCCcEEEE
Q 004301 200 KESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGGCFSSDILAAIEQAIDDNVNVLSM 279 (762)
Q Consensus 200 ~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~dVIn~ 279 (762)
.......|.+||||||||||||...++.. +.||||+|+|+.+|+++.. ++..++++||+|+++++ +||||
T Consensus 89 ~~~~p~~d~~gHGT~vAGiiaa~~~n~~~--------~~GvAp~a~i~~~rv~~~~-~~~~~~~~ai~~a~~~~-~Iin~ 158 (503)
T 2id4_A 89 NLPKPRLSDDYHGTRCAGEIAAKKGNNFC--------GVGVGYNAKISGIRILSGD-ITTEDEAASLIYGLDVN-DIYSC 158 (503)
T ss_dssp SCCCCCSTTTTHHHHHHHHHHCCSSSSSS--------CCCTTTTSEEEEEECTTSC-CCHHHHHHHTTTTTTTC-SEEEE
T ss_pred CCCCCCCCCCChHHHHHHHHHhccCCCCC--------cEEECCCCEEEEEEeeCCC-CChHHHHHHHHhHhhcC-CEEEe
Confidence 01112357889999999999998643322 3799999999999998643 67888999999999998 99999
Q ss_pred ccCCCCCC----CcccHHHHHHHHHH-----hcCCEEEEecCCCCCCCC--CccC--CCCceEEecCCCCCCccceeEEc
Q 004301 280 SLGGGTSD----YYKDSVAIGAFAAM-----EKGILVSCSAGNAGPSSY--SLSN--VAPWITTVGAGTLDRDFPAFVSL 346 (762)
Q Consensus 280 SlG~~~~~----~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~g~~~~--~~~~--~~p~vitVgA~~~~~~~~~~~~~ 346 (762)
|||..... .....+..++.++. .+|++||+||||+|.... .++. .++++|+|||++.
T Consensus 159 S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~---------- 228 (503)
T 2id4_A 159 SWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDH---------- 228 (503)
T ss_dssp CEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECT----------
T ss_pred CCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCC----------
Confidence 99975421 12234555665665 479999999999997532 2232 5678999998432
Q ss_pred CCCcEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEE
Q 004301 347 GNGQNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVL 426 (762)
Q Consensus 347 ~~g~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~ 426 (762)
T Consensus 229 -------------------------------------------------------------------------------- 228 (503)
T 2id4_A 229 -------------------------------------------------------------------------------- 228 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecCCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEE
Q 004301 427 ANTESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMI 506 (762)
Q Consensus 427 ~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~ 506 (762)
.+.+++||++||.. |++
T Consensus 229 -------------------------------------------------------~~~~a~~S~~g~~~--------~~~ 245 (503)
T 2id4_A 229 -------------------------------------------------------KDLHPPYSEGCSAV--------MAV 245 (503)
T ss_dssp -------------------------------------------------------TSCCCTTCCCCTTE--------EEE
T ss_pred -------------------------------------------------------CCCcCCcCCCCCcc--------eEe
Confidence 12568999999987 787
Q ss_pred e----cCCcEEecccCCCCCCCCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccccC-C
Q 004301 507 A----PGVNILAGWSGAVGPTGLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAYVSYKN-G 581 (762)
Q Consensus 507 A----PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~-g 581 (762)
| ||..|+++...+ ..|..++|||||||||||++|||+|++|+|++.+||++|++||+++... .
T Consensus 246 a~~~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~ 313 (503)
T 2id4_A 246 TYSSGSGEYIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNAD 313 (503)
T ss_dssp EECSBTTBCEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGG
T ss_pred ecCCCCCCceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcC
Confidence 7 899999985432 3799999999999999999999999999999999999999999987643 1
Q ss_pred cccccccCCCCCCCCCCCCCCcCccccCCCCe
Q 004301 582 QKLQDIATGKASTPFDHGAGHVNPVSALNPGL 613 (762)
Q Consensus 582 ~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~l 613 (762)
....... ........||||+||+.+|++...
T Consensus 314 ~~~~~~~-~g~~~~~~~G~G~vda~~Av~~a~ 344 (503)
T 2id4_A 314 GDWRDSA-MGKKYSHRYGFGKIDAHKLIEMSK 344 (503)
T ss_dssp GCCEECS-SSSEEBTTTBTCBCCHHHHHHHHT
T ss_pred CCceecC-CCCccCcccCCcEecHHHHHHHHh
Confidence 1111110 112234589999999999998443
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=3.9e-43 Score=409.52 Aligned_cols=316 Identities=21% Similarity=0.186 Sum_probs=198.6
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCceeeeeeeccccccccCCCCCCC
Q 004301 120 ANLFPTSGSASEVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGACETGTNFNASNCNRKLIGARYFARGYEATLGPIDES 199 (762)
Q Consensus 120 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 199 (762)
..+|..+++|+||+|||||||||++||||.++- ..+.++|..+..
T Consensus 60 ~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n~--------------------------~~~~~~~~~~~~--------- 104 (600)
T 3hjr_A 60 WWAHRTGVLGQGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTGSD--------- 104 (600)
T ss_dssp HHHHHHTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTSSS---------
T ss_pred HHHHHcCCCCCCeEEEEEcCCCCCCChhHhhcc--------------------------ccCcceeecCCC---------
Confidence 358999999999999999999999999997530 011222322211
Q ss_pred CCCCCCCCCCCChhhHHHhhcccCCCCCccccccCcceeeeccCceEEEEEEEecCC-CCHHHHHHHH-HHHHhCCCcEE
Q 004301 200 KESKSPRDDDGHGTHTASTAAGSVVEGASLFGYAAGTARGMATRARVAAYKVCWVGG-CFSSDILAAI-EQAIDDNVNVL 277 (762)
Q Consensus 200 ~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai-~~a~~~g~dVI 277 (762)
+.....|.+||||||||||||.. ++ .| +.||||+|+|+.+|++++.+ +..++++.|+ +++..++++||
T Consensus 105 -dp~p~~~~~gHGThVAGiIAa~~-n~---~g-----~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~ 174 (600)
T 3hjr_A 105 -DPTPTDPDTAHGTSVSGIIAAVD-NA---IG-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVF 174 (600)
T ss_dssp -CCCCCSTTCCHHHHHHHHHHCCS-SS---SS-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEE
T ss_pred -CCCCCCCCCChHHHHHHHHhEeC-CC---CC-----cEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEE
Confidence 11123457899999999999863 11 12 37999999999999998776 6777877766 67788899999
Q ss_pred EEccCCCC-CCCcc-----cHHHHHHHHH--HhcCCEEEEecCCCCCCCCCccCCCCceEEecCCCCCCccceeEEcCCC
Q 004301 278 SMSLGGGT-SDYYK-----DSVAIGAFAA--MEKGILVSCSAGNAGPSSYSLSNVAPWITTVGAGTLDRDFPAFVSLGNG 349 (762)
Q Consensus 278 n~SlG~~~-~~~~~-----~~~~~a~~~a--~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g 349 (762)
|+|||... ..... ..+..++..+ ..+|+++|+||||.+....... .. +.+. +++
T Consensus 175 n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~-----~~-~~~~------------g~~ 236 (600)
T 3hjr_A 175 NQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGG-----YV-LNRT------------GNG 236 (600)
T ss_dssp EECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETT-----EE-EEEE------------SSC
T ss_pred ecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccc-----cc-cccC------------CCC
Confidence 99999753 11111 1222222222 2579999999999864321000 00 0000 000
Q ss_pred cEEEeEeeecCCCCCCceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeec
Q 004301 350 QNYSGVSLYKGDGLPGKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANT 429 (762)
Q Consensus 350 ~~~~g~s~~~~~~~~~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~ 429 (762)
. ......|... .+......|.+.
T Consensus 237 ~----------------------------~~~~~~~~~d--~~~~~~~~IsVg--------------------------- 259 (600)
T 3hjr_A 237 P----------------------------KLPFENSNLD--PSNSNFWNLVVS--------------------------- 259 (600)
T ss_dssp C----------------------------CCCSSBTTSS--GGGGSSSEEEEE---------------------------
T ss_pred C----------------------------CCCccccccc--CccccCcceEEe---------------------------
Confidence 0 0000001000 000000111110
Q ss_pred CCCCccccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecceeecCcCCCeeecccCCCCCCCCCCCCCCcEEecC
Q 004301 430 ESNGEELVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEGTKVGVEPSPVVAAFSSRGPNSITPELLKPDMIAPG 509 (762)
Q Consensus 430 ~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG 509 (762)
.....+.++.||++|+.. +++|||
T Consensus 260 ------------------------------------------------A~~~~g~~a~yS~~G~~v--------~~~apg 283 (600)
T 3hjr_A 260 ------------------------------------------------ALNADGVRSSYSSVGSNI--------FLSATG 283 (600)
T ss_dssp ------------------------------------------------EECTTSSBCTTCCBCTTC--------CEEEEC
T ss_pred ------------------------------------------------eecCCCCEeecccCCcce--------eeccCC
Confidence 012345789999999987 899999
Q ss_pred CcE--------EecccCCCCCC-------------CCCCCCcccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHH
Q 004301 510 VNI--------LAGWSGAVGPT-------------GLATDSRRVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRS 568 (762)
Q Consensus 510 ~~I--------~sa~~~~~~~~-------------~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~ 568 (762)
..+ .+..++..... ..........|..++|||||||||||++|||+|+||+||++|||+
T Consensus 284 ~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~lt~~~v~~ 363 (600)
T 3hjr_A 284 GEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRD 363 (600)
T ss_dssp CSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHH
T ss_pred CCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCCCCHHHHHH
Confidence 763 22222211000 001112234688999999999999999999999999999999999
Q ss_pred HHHhcccccccCCcccccc--------------------cCCCCCCCCCCCCCCcCccccCCCC
Q 004301 569 ALMTTAYVSYKNGQKLQDI--------------------ATGKASTPFDHGAGHVNPVSALNPG 612 (762)
Q Consensus 569 ~L~~TA~~~~~~g~~~~~~--------------------~~~~~~~~~~~G~G~vd~~~A~~~~ 612 (762)
+|++||++++....|.... ..+.. ....||+|+||+.+|++.+
T Consensus 364 ~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~-~s~~yGfG~vDA~~aV~~A 426 (600)
T 3hjr_A 364 LLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMW-FSPTYGFGLIDVNKALELA 426 (600)
T ss_dssp HHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCE-EBTTTBTCBCCHHHHHHHH
T ss_pred HHHhhCccCCCCCCcccccccccccccccccccCCcccccCCce-EccccCCceecHHHHHHHh
Confidence 9999999998766553210 11111 2347999999999998744
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.92 E-value=5.9e-26 Score=258.40 Aligned_cols=96 Identities=23% Similarity=0.402 Sum_probs=77.8
Q ss_pred eeeeccCceEEEEEEEecCCCCHHHHHHHHHHHHh---CCCcEEEEccCCCCCCC---cccHHHHHHHHHHhcCCEEEEe
Q 004301 237 ARGMATRARVAAYKVCWVGGCFSSDILAAIEQAID---DNVNVLSMSLGGGTSDY---YKDSVAIGAFAAMEKGILVSCS 310 (762)
Q Consensus 237 ~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~---~g~dVIn~SlG~~~~~~---~~~~~~~a~~~a~~~Gi~vV~A 310 (762)
+.||||+|+|+.|++. ....+++++|+||++ ++++|||||||...... +...+..++.+|..+||+||+|
T Consensus 274 ~~gvAp~a~i~~~~~~----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv~A 349 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAP----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAA 349 (552)
T ss_dssp HHHHCTTSEEEEEECC----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhccCCCCeEEEEEcC----CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 4799999999999973 356789999999998 79999999999864221 2345666777888999999999
Q ss_pred cCCCCCCC--------CCccCCCCceEEecCCCC
Q 004301 311 AGNAGPSS--------YSLSNVAPWITTVGAGTL 336 (762)
Q Consensus 311 AGN~g~~~--------~~~~~~~p~vitVgA~~~ 336 (762)
|||+|... ..+++.+|+|++||+++.
T Consensus 350 sGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 350 AGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp CCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred cCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 99999653 356678999999999753
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.87 E-value=1.3e-22 Score=219.99 Aligned_cols=99 Identities=20% Similarity=0.196 Sum_probs=80.9
Q ss_pred eeeccCceEEEEEEEecCCCCHHHHHHHHHHHHh-CCCcEEEEccCCCCC----CCcccHHHHHHHHHHhcCCEEEEecC
Q 004301 238 RGMATRARVAAYKVCWVGGCFSSDILAAIEQAID-DNVNVLSMSLGGGTS----DYYKDSVAIGAFAAMEKGILVSCSAG 312 (762)
Q Consensus 238 ~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~-~g~dVIn~SlG~~~~----~~~~~~~~~a~~~a~~~Gi~vV~AAG 312 (762)
..+||+++++.|++.+..+++..+++++|+||++ ++++|||||||.... ..+.+.+..++.+|..+||+||+|||
T Consensus 90 g~~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhcCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 4578999999999987655778899999999998 899999999998531 12335667777788899999999999
Q ss_pred CCCCCCC-------------CccCCCCceEEecCCCC
Q 004301 313 NAGPSSY-------------SLSNVAPWITTVGAGTL 336 (762)
Q Consensus 313 N~g~~~~-------------~~~~~~p~vitVgA~~~ 336 (762)
|+|...+ .+++.+|+|++||+++.
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~ 206 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL 206 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeec
Confidence 9997642 45678899999999754
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.06 E-value=2.3e-10 Score=129.28 Aligned_cols=76 Identities=20% Similarity=0.350 Sum_probs=54.6
Q ss_pred HHHHHHHHHHh--CCCcEEEEccCCCCCC---CcccHHHHHHHHHHhcCCEEEEecCCCCCCC----------CCccCCC
Q 004301 261 DILAAIEQAID--DNVNVLSMSLGGGTSD---YYKDSVAIGAFAAMEKGILVSCSAGNAGPSS----------YSLSNVA 325 (762)
Q Consensus 261 ~i~~ai~~a~~--~g~dVIn~SlG~~~~~---~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----------~~~~~~~ 325 (762)
.++..+++... +-++|||+|||..... .+.+.+...+.++..+||.|++|+||+|... ..+++..
T Consensus 284 ~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASGD~G~~~~~~~~~~~~~~~~Pas~ 363 (544)
T 3edy_A 284 PFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGDSGAGCWSVSGRHQFRPTFPASS 363 (544)
T ss_dssp HHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCSSTTBCEEETTEEECCCEETTTC
T ss_pred cHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecCCCCccccCCCCCccccCCCcCCC
Confidence 44554444432 4689999999986422 2234455566678899999999999999743 2466789
Q ss_pred CceEEecCCCC
Q 004301 326 PWITTVGAGTL 336 (762)
Q Consensus 326 p~vitVgA~~~ 336 (762)
|||++||+++.
T Consensus 364 P~VtaVGgT~l 374 (544)
T 3edy_A 364 PYVTTVGGTSF 374 (544)
T ss_dssp TTSEEEEEEEE
T ss_pred CcEEEEeeeec
Confidence 99999999754
No 38
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.99 E-value=4.9e-10 Score=99.93 Aligned_cols=78 Identities=12% Similarity=0.155 Sum_probs=68.8
Q ss_pred CCCeEEEEeCCCCCCcchhhhHHHHHHhhcccCCCCcEEEEEcceeeEEEEEcCHHHHHHHhcCCCeEEEEeCceecc
Q 004301 28 QRATYIIHMAKSEMPASFEHHTHWYESSLKSVSDSAEILYTYDNVIHGFSTQLTREEAESLEQRPGILSVLPELKYEL 105 (762)
Q Consensus 28 ~~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~y~~~~~g~s~~~~~~~~~~L~~~p~V~~v~~~~~~~~ 105 (762)
.+++|||.|+++........|.+|+.+++.+...+.+++|+|.+.|+||+++++++++++|+++|+|.+||+|+.++.
T Consensus 36 ip~~YIV~lk~~~~~~~~~~h~~~l~s~~~~~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 36 LPGTYVVVLKEETHLSQSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 113 (114)
T ss_dssp EEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CCCcEEEEECCCCCHHHHHHHHHHHHHHhhhcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEec
Confidence 578999999998776667788899988887643477999999999999999999999999999999999999998764
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.91 E-value=3.8e-09 Score=88.13 Aligned_cols=74 Identities=14% Similarity=0.241 Sum_probs=59.0
Q ss_pred CCCCeEEEEeCCCCCCcchhhhHHHHHHhhcccCCCCcEEEEEcceeeEEEEEcCHHHHHHHhcCCCeEEEEeCceeccC
Q 004301 27 DQRATYIIHMAKSEMPASFEHHTHWYESSLKSVSDSAEILYTYDNVIHGFSTQLTREEAESLEQRPGILSVLPELKYELH 106 (762)
Q Consensus 27 ~~~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~y~~~~~g~s~~~~~~~~~~L~~~p~V~~v~~~~~~~~~ 106 (762)
..+++|||.|+++...+.. ..++++.. +.++.++|.+ |+||+++++++++++|+++|+|.+||+|+.++++
T Consensus 6 ~i~~~YIV~~k~~~~~~~~------~~~~~~~~--g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~~~ 76 (80)
T 3cnq_P 6 NGEKKYIVGFKQGFKSCAK------KEDVISEK--GGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYRAL 76 (80)
T ss_dssp --CCEEEEEECTTCCSHHH------HHHHHHTT--TCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEEEC
T ss_pred cCCCCEEEEECCCCChHHH------HHHHHHHc--CCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEEEe
Confidence 4589999999988764321 12233333 6789999998 9999999999999999999999999999999987
Q ss_pred CCC
Q 004301 107 TTR 109 (762)
Q Consensus 107 ~~~ 109 (762)
++.
T Consensus 77 tt~ 79 (80)
T 3cnq_P 77 SAT 79 (80)
T ss_dssp CC-
T ss_pred eec
Confidence 654
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.80 E-value=6.3e-09 Score=93.88 Aligned_cols=78 Identities=12% Similarity=0.155 Sum_probs=63.9
Q ss_pred CCCeEEEEeCCCCCCcchhhhHHHHHHhhcccCCCCcEEEEEcceeeEEEEEcCHHHHHHHhcCCCeEEEEeCceecc
Q 004301 28 QRATYIIHMAKSEMPASFEHHTHWYESSLKSVSDSAEILYTYDNVIHGFSTQLTREEAESLEQRPGILSVLPELKYEL 105 (762)
Q Consensus 28 ~~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~y~~~~~g~s~~~~~~~~~~L~~~p~V~~v~~~~~~~~ 105 (762)
.+++|||.||++........+.+++.+.+++...+.++.++|++.|+||+++++++++++|+++|+|.+|++++.++.
T Consensus 46 Ip~~YIV~~K~~~~~~~~~~~~~~l~~~~~~r~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 46 LPGTYVVVLKEETHLSQSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp EEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHHhhcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEec
Confidence 478999999998866555555555555444422367899999999999999999999999999999999999998764
No 41
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.67 E-value=1.2e-07 Score=91.85 Aligned_cols=94 Identities=19% Similarity=0.123 Sum_probs=74.3
Q ss_pred CCCcccCCCCCccc-------cCCcEEEEeCCC-chhhhHHHHHHHcCceEEEEeecCCCCcc--c--cccCcccceEEE
Q 004301 381 NGNLCMMDTLIPEK-------VAGKIVMCDRGV-NARVQKGAVVKAAGGLGMVLANTESNGEE--L--VADAHLLPATAV 448 (762)
Q Consensus 381 ~~~~c~~~~~~~~~-------~~g~iv~~~~g~-~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~--~--~~~~~~~p~~~i 448 (762)
....|.+..+.... .+|||+|++||. |.|.+|..+++++||.++|+||+...+.. . ..+...||+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 46789877653222 478999999999 99999999999999999999998532211 1 122357999999
Q ss_pred chhhHHHHHHHHhcCCCcEEEEEecc
Q 004301 449 GQKFGDAIKSYLVSDPKPTVTILFEG 474 (762)
Q Consensus 449 ~~~~~~~l~~~~~~~~~~~~~i~~~~ 474 (762)
+..+|+.|++.+..+...+++|.+..
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 99999999999999888777776644
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.64 E-value=6.5e-08 Score=79.53 Aligned_cols=70 Identities=13% Similarity=0.136 Sum_probs=57.4
Q ss_pred CeEEEEeCCCCCCcchhhhHHHHHHhhcccCCCCcEEEEEc-ceeeEEEEEcCHHHHHHHhcC--CCeEEEEeCceecc
Q 004301 30 ATYIIHMAKSEMPASFEHHTHWYESSLKSVSDSAEILYTYD-NVIHGFSTQLTREEAESLEQR--PGILSVLPELKYEL 105 (762)
Q Consensus 30 ~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~y~-~~~~g~s~~~~~~~~~~L~~~--p~V~~v~~~~~~~~ 105 (762)
+.|||.|+++........+..++.+ . +.++.+.|. ..|+||+++++++.+++|+++ |.|.+||+|+.+++
T Consensus 3 ~sYIV~lk~~~~~~~~~~~~~~~~~----~--gg~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 3 GKFIVIFKNDVSEDKIRETKDEVIA----E--GGTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHH----H--TCCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEEC
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHh----h--CCceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEeC
Confidence 7899999998765555555555443 2 467889994 799999999999999999999 89999999998764
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.76 E-value=4.2e-05 Score=60.48 Aligned_cols=62 Identities=15% Similarity=0.307 Sum_probs=51.3
Q ss_pred CeEEEEeCCCCCCcchhhhHHHHHHhhcccCCCCcEEEEEcceeeEEEEEcCHHHHHHHhcCCCeEEEEeCceec
Q 004301 30 ATYIIHMAKSEMPASFEHHTHWYESSLKSVSDSAEILYTYDNVIHGFSTQLTREEAESLEQRPGILSVLPELKYE 104 (762)
Q Consensus 30 ~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~y~~~~~g~s~~~~~~~~~~L~~~p~V~~v~~~~~~~ 104 (762)
.+|||.|+++... .+.++.. +.++.++|. .+++++++++++.++.|+++|+|++|++|...+
T Consensus 2 ~~~IV~f~~~~~~----------~~~i~~~--gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 2 IRVIVSVDKAKFN----------PHEVLGI--GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp EEEEEEECGGGCC----------GGGGGGG--TCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred eeEEEEEcCcchh----------HHHHHHC--CCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 4899999875221 2234444 799999997 899999999999999999999999999998765
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.37 E-value=0.016 Score=63.67 Aligned_cols=69 Identities=22% Similarity=0.292 Sum_probs=57.5
Q ss_pred cccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeecCCCCcc---ccccCcccceEEEchhhHHHHHHHHh
Q 004301 393 EKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANTESNGEE---LVADAHLLPATAVGQKFGDAIKSYLV 461 (762)
Q Consensus 393 ~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~---~~~~~~~~p~~~i~~~~~~~l~~~~~ 461 (762)
.+++||||++.++.|.+.+|..+++++||.|+|++++...... .......+|...++.++++.|+..+.
T Consensus 111 ~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 111 KDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp SCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred CCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 4799999999999999999999999999999999998532111 11134679999999999999999984
No 45
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.68 E-value=0.038 Score=61.05 Aligned_cols=102 Identities=14% Similarity=0.196 Sum_probs=70.0
Q ss_pred CceeeEEEccCCCCCCCCCcccCCCCCccccCCcEEEEeCCCch---------hhhH----HHHHHHcCceEEEEeecCC
Q 004301 365 GKLLPFVYAGNASNATNGNLCMMDTLIPEKVAGKIVMCDRGVNA---------RVQK----GAVVKAAGGLGMVLANTES 431 (762)
Q Consensus 365 ~~~~p~v~~~~~~~~~~~~~c~~~~~~~~~~~g~iv~~~~g~~~---------~~~~----~~~~~~~Ga~g~i~~n~~~ 431 (762)
..+-++|+..+. ..|.. ..+.+++|||||+.++.|. +..+ ..+|+++||+|+|++|+..
T Consensus 105 ~vta~lV~v~~~------~~~~~--~~~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~ 176 (444)
T 3iib_A 105 GLSATIVRFDTL------QDLQN--AEAGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGT 176 (444)
T ss_dssp CEEEEEEEESSH------HHHHT--SCTTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCS
T ss_pred CeEEEEEecCCH------HHHhh--ccccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCC
Confidence 456778876421 12322 2356899999999998773 3344 3579999999999998643
Q ss_pred CCc-------c-ccccCcccceEEEchhhHHHHHHHHhcCCCcEEEEEecc
Q 004301 432 NGE-------E-LVADAHLLPATAVGQKFGDAIKSYLVSDPKPTVTILFEG 474 (762)
Q Consensus 432 ~~~-------~-~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~ 474 (762)
... . .......+|++.|+.++++.|...+..+...++++....
T Consensus 177 ~~~~~~~tg~~~~~~~~~~IP~~~Is~~da~~L~~~l~~g~~~~v~l~~~~ 227 (444)
T 3iib_A 177 DHDRMAHTGMMRYEEGVTAIPAAAISNPDADLINAMLKRDKEVVISLELGS 227 (444)
T ss_dssp CCSSCCCCCBCCCCTTSCCCCEEEECHHHHHHHHHHHTTTCCCEEEEEEEE
T ss_pred cccccccCCccccCCCCCCCCeEEecHHHHHHHHHHHhCCCCeEEEEEEee
Confidence 211 1 111245799999999999999999987766666665443
No 46
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.51 E-value=0.022 Score=65.45 Aligned_cols=69 Identities=13% Similarity=0.195 Sum_probs=55.3
Q ss_pred cccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeecCCCCcc------------------cc----------------c
Q 004301 393 EKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANTESNGEE------------------LV----------------A 438 (762)
Q Consensus 393 ~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~------------------~~----------------~ 438 (762)
.+++|||||+.+|.|.+.+|..+|+++||+|+|++++...... .. .
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 4799999999999999999999999999999999987532100 00 0
Q ss_pred cCcccceEEEchhhHHHHHHHHh
Q 004301 439 DAHLLPATAVGQKFGDAIKSYLV 461 (762)
Q Consensus 439 ~~~~~p~~~i~~~~~~~l~~~~~ 461 (762)
....||+..|+..+++.|+..+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 12368999999999999988654
No 47
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=94.76 E-value=0.043 Score=63.78 Aligned_cols=71 Identities=24% Similarity=0.325 Sum_probs=56.3
Q ss_pred ccccCCcEEEEeCCCchhhhHHHHHHHcCceEEEEeecCC----------------------CCcc----cccc------
Q 004301 392 PEKVAGKIVMCDRGVNARVQKGAVVKAAGGLGMVLANTES----------------------NGEE----LVAD------ 439 (762)
Q Consensus 392 ~~~~~g~iv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~----------------------~~~~----~~~~------ 439 (762)
..+++|||||+++|.|.+.+|..+|+++||+|+|++++.. .|.. ...|
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 3579999999999999999999999999999999998621 0000 0011
Q ss_pred ----------------CcccceEEEchhhHHHHHHHHhc
Q 004301 440 ----------------AHLLPATAVGQKFGDAIKSYLVS 462 (762)
Q Consensus 440 ----------------~~~~p~~~i~~~~~~~l~~~~~~ 462 (762)
...||+..|+..+++.|+..+..
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 24789999999999999988753
No 48
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.43 E-value=0.075 Score=47.32 Aligned_cols=72 Identities=18% Similarity=0.151 Sum_probs=52.7
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeecCCCCeEEEEEcCeEEEeecCeeeEEEEEEEEecCCCCCeEEEEEEEE-cCceEE
Q 004301 676 SVLKYTRSLTNVGP-PGTYKVFITSSTGPGVKISVEPATLSFTQANEKKSYTVTFTVSSMPSNTNSFAHLEWS-DGKYIV 753 (762)
Q Consensus 676 ~~~~~~rtv~n~~~-~~~y~~~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~G~i~~~-~~~~~v 753 (762)
.+.+.+++|+|+|+ +..|+... ++ -++++|....+ ++|+++.++|+|.+.. -+.+.+.|.+. ++...+
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~----~~--~F~i~P~~g~L-~pg~~~~i~V~F~P~~---~g~~~~~l~v~~~~g~~~ 110 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKT----CR--PFSIEPAIGTL-NVGESMQLEVEFEPQS---VGDHSGRLIVCYDTGEKV 110 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEC----CT--TEEEESSEEEE-CTTCEEEEEEEECCSS---SBCCCCBCEEEESSSCEE
T ss_pred CeEEEEEEEEECCCCCEEEEEec----CC--CeEEECCcCEE-CCCCEEEEEEEEEcCC---CccEEEEEEEEECCCCEE
Confidence 47888999999999 88887554 33 36678999998 7999999999998862 23456666665 554555
Q ss_pred EeEE
Q 004301 754 GSPI 757 (762)
Q Consensus 754 ~~P~ 757 (762)
.+++
T Consensus 111 ~v~L 114 (122)
T 2ys4_A 111 FVSL 114 (122)
T ss_dssp CCEE
T ss_pred EEEE
Confidence 5543
No 49
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=87.34 E-value=0.27 Score=60.31 Aligned_cols=25 Identities=20% Similarity=0.489 Sum_probs=23.2
Q ss_pred CCCCCCCcEEEEEcccCCCCCCCCC
Q 004301 125 TSGSASEVIVGVLDTGVWPESKSFD 149 (762)
Q Consensus 125 ~~~~G~Gv~VgVIDtGid~~Hp~f~ 149 (762)
-.+.|+||+|||+|||||+.+|-|+
T Consensus 31 P~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 31 PEYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TTCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCCccEEEEEeCCCCCCCCcce
Confidence 3678999999999999999999996
No 50
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=85.56 E-value=3.6 Score=37.21 Aligned_cols=85 Identities=15% Similarity=0.054 Sum_probs=59.7
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeecC--CCCeEEEEEcCeEEEeecCeeeEEEEEEEEecCC------CCCeEEEEEEE
Q 004301 676 SVLKYTRSLTNVGP-PGTYKVFITSST--GPGVKISVEPATLSFTQANEKKSYTVTFTVSSMP------SNTNSFAHLEW 746 (762)
Q Consensus 676 ~~~~~~rtv~n~~~-~~~y~~~~~~~~--~~~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~------~~~~~~G~i~~ 746 (762)
...+.++||+|.|. +.+|+....... ...--++++|..-++ ++|++.++.|++...... ...-++--|++
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL 121 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVL 121 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEE
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEEE
Confidence 35677889999999 999998743200 111236678999888 899999999999875321 12345666777
Q ss_pred E-cCceEEEeEEEEEe
Q 004301 747 S-DGKYIVGSPIAISW 761 (762)
Q Consensus 747 ~-~~~~~v~~P~~v~~ 761 (762)
. .++....+|+--.|
T Consensus 122 ~Ve~G~d~fI~v~g~~ 137 (140)
T 3qbt_B 122 HLDRGKDYFLTISGNY 137 (140)
T ss_dssp EETTSCEEEEEEEEEE
T ss_pred EeecCCcEEEEEeccc
Confidence 6 67777788886655
No 51
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.87 E-value=0.86 Score=39.40 Aligned_cols=67 Identities=13% Similarity=0.137 Sum_probs=47.4
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeecCCCCeEEEEEcCeEEEeecCeeeEEEEEEEEecCCCCCeEEEEEEEE
Q 004301 676 SVLKYTRSLTNVGP-PGTYKVFITSSTGPGVKISVEPATLSFTQANEKKSYTVTFTVSSMPSNTNSFAHLEWS 747 (762)
Q Consensus 676 ~~~~~~rtv~n~~~-~~~y~~~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~G~i~~~ 747 (762)
...+.+.+++|.|+ +..|+... ...+.+..++++|..-.+ ++|++++++|++.+.. .+ ...=.|.+.
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~-~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~--~g-~f~~~i~v~ 93 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTP-PTSALGACFVFSPKEGII-EPSGVQAIQISFSSII--LG-NFEEEFLVN 93 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECC-CSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCC--CE-EEEEEECEE
T ss_pred CEEEEEEEEEECCcceEEEEEec-CCccccCcEEEECCcCEE-CCCCEEEEEEEEECCC--cc-eEEEEEEEE
Confidence 35777889999999 99998732 211123447778999888 7999999999998862 23 333456665
No 52
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=84.09 E-value=0.64 Score=51.08 Aligned_cols=32 Identities=25% Similarity=0.284 Sum_probs=26.8
Q ss_pred cCCCeeecccCCCCCCCCCCCCCCcEEecCCcEEecccCC
Q 004301 480 EPSPVVAAFSSRGPNSITPELLKPDMIAPGVNILAGWSGA 519 (762)
Q Consensus 480 ~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~ 519 (762)
...+.++.||++||.. ||+|||++|+++++..
T Consensus 181 ~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~g 212 (441)
T 1y9z_A 181 DSNLDHAAFSQYTDQV--------EISGPGEAILSTVTVG 212 (441)
T ss_dssp CTTCCBCTTSCCCTTE--------EEEEECSSEEEECSTT
T ss_pred CCCCCCCccccCCCce--------EEEeccCCeeccccCC
Confidence 3445789999999865 9999999999998753
No 53
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=79.80 E-value=6.5 Score=34.29 Aligned_cols=55 Identities=13% Similarity=0.092 Sum_probs=44.4
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeecCCCCeEEEEEcCeEEEeecCeeeEEEEEEEEecC
Q 004301 676 SVLKYTRSLTNVGP-PGTYKVFITSSTGPGVKISVEPATLSFTQANEKKSYTVTFTVSSM 734 (762)
Q Consensus 676 ~~~~~~rtv~n~~~-~~~y~~~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~ 734 (762)
-+-..++.|.|... +.+|++++.. .+++++. .+..+++ ++++..++.|.|..+..
T Consensus 31 I~N~Ytlki~Nkt~~~~~~~l~v~g--~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~~ 86 (118)
T 2r39_A 31 VENTYTLKVINKTQQVQEYNLDVKG--LNDVSWY-GKQTIQV-EPGEVLNLPMSLGADPD 86 (118)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEES--CSSCEEE-SCCEEEE-CTTCEEEEEEEEEECGG
T ss_pred EEEEEEEEEEECCCCCEEEEEEEeC--CcccEEe-CCCcEEE-CCCCEEEEEEEEEEChH
Confidence 46778889999999 9999999988 6776653 3556777 79999999999988743
No 54
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=79.15 E-value=6.7 Score=34.80 Aligned_cols=50 Identities=24% Similarity=0.258 Sum_probs=37.9
Q ss_pred ceEEEEEEEEecCC--CceEEEEEeecCCCCeEEEEEcCeEEEeecCeeeEEEEEEEE
Q 004301 676 SVLKYTRSLTNVGP--PGTYKVFITSSTGPGVKISVEPATLSFTQANEKKSYTVTFTV 731 (762)
Q Consensus 676 ~~~~~~rtv~n~~~--~~~y~~~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~vt~~~ 731 (762)
+..+++.||+|.|. ...|++.+.. .|-.+.-. .+.+ ++|++++++++..+
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~lyv---ng~~v~t~--~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVYI---NGTLYKNW--TVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEEE---TTEEEEEE--EEEE-CTTCEEEEEEEECC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEEE---CCEEEeeE--Eecc-CCCCeEEEEEEEEc
Confidence 68999999999998 5778888876 56555433 3456 78999988888753
No 55
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=73.06 E-value=14 Score=35.99 Aligned_cols=66 Identities=12% Similarity=-0.014 Sum_probs=47.0
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeecCCCCeEEEEEcCeEEEeecCeeeEEEEEEEEecCCCCCeEEEEEEEE
Q 004301 676 SVLKYTRSLTNVGP-PGTYKVFITSSTGPGVKISVEPATLSFTQANEKKSYTVTFTVSSMPSNTNSFAHLEWS 747 (762)
Q Consensus 676 ~~~~~~rtv~n~~~-~~~y~~~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~G~i~~~ 747 (762)
...+.+++++|.|+ +.+++.. .. |+-+++...|. .+ ++|++.+++|+++......-+...+.|++.
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~-~~--p~~~~~~~~~~--~I-~PG~~g~I~vt~~~~~~~~~G~~~~~i~v~ 85 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVV-SL--PSFVSLDDRAF--RL-QAREPRELNLSLAVPRNMPPGMKDEPLVLE 85 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEE-EC--CTTEECSCCEE--EE-CSSSCEEEEEEECCCTTCCSEEEEEEEEEE
T ss_pred CcceEEEEEEeCCCCceEEEec-cC--CCceEeeeCcc--ee-CCCCceEEEEEEcchhcccCCceeeEEEEE
Confidence 35666889999999 8877753 23 67666654454 44 789999999999877544335567778887
No 56
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=68.36 E-value=23 Score=37.52 Aligned_cols=83 Identities=16% Similarity=0.085 Sum_probs=57.0
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeecCCCC-eE---EEEEcCeEEEeecCeeeEEEEEEEEecCCC------CCeEEEEE
Q 004301 676 SVLKYTRSLTNVGP-PGTYKVFITSSTGPG-VK---ISVEPATLSFTQANEKKSYTVTFTVSSMPS------NTNSFAHL 744 (762)
Q Consensus 676 ~~~~~~rtv~n~~~-~~~y~~~~~~~~~~~-~~---v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~------~~~~~G~i 744 (762)
...+-++||+|.|. +.+|+..-.. ... .. ++|+|..-++ .+|++.+++|++....... ..-.+--+
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~~--~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~~~~~~ln~g~~~l~diL 122 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPKL--NDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDIL 122 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCT--TCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCTTTHHHHHHTSSCSCEEE
T ss_pred CeEEEEEEEEecCCceEEEEEEeCC--CCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECHHHHHHHhcCccccceEE
Confidence 46788889999999 9999885432 111 22 7788999888 7999999999998875210 23345566
Q ss_pred EEE-cCceEEEeEEEEEe
Q 004301 745 EWS-DGKYIVGSPIAISW 761 (762)
Q Consensus 745 ~~~-~~~~~v~~P~~v~~ 761 (762)
++. ++++..-+|+-..|
T Consensus 123 vL~ve~G~d~FI~v~~~~ 140 (366)
T 3qis_A 123 VLHLDRGKDYFLTISGNY 140 (366)
T ss_dssp EEEETTSCEEEEEEEEEE
T ss_pred EEEEeCCCcEEEEecccc
Confidence 666 55555566665544
No 57
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=62.00 E-value=9.6 Score=44.39 Aligned_cols=72 Identities=17% Similarity=0.254 Sum_probs=43.4
Q ss_pred CccCCceeeeccccccCCCcceEEEEEEEEecCC-CceEEEEEeecCCCCeEEEEEcC-------eE-EEeecCeeeEEE
Q 004301 656 DFNYPSFAVNIETAQSSSGSSVLKYTRSLTNVGP-PGTYKVFITSSTGPGVKISVEPA-------TL-SFTQANEKKSYT 726 (762)
Q Consensus 656 ~ln~ps~~~~~~~~~~~~~~~~~~~~rtv~n~~~-~~~y~~~~~~~~~~~~~v~v~p~-------~~-~~~~~~~~~~~~ 726 (762)
-|-|.+|..........+ ...+++++|||+|+ ...-.+.+....|.+ .+. .|. .+ .+ ++||+++++
T Consensus 597 GLSYTtF~ys~~~~~~~~--~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~-~~~-~P~k~L~gF~kv~~L-~pGes~~V~ 671 (721)
T 2x41_A 597 GLSYTTFEYSDLNVSFDG--ETLRVQYRIENTGGRAGKEVSQVYIKAPKG-KID-KPFQELKAFHKTRLL-NPGESEEVV 671 (721)
T ss_dssp CBCSSCEEEEEEEEEECS--SEEEEEEEEEECSSSCBCCEEEEEEECCCS-SSC-CCSCEEEEEEECCCB-CTTCEEEEE
T ss_pred CCCcceeEeeceEeecCC--CeEEEEEEEEECCCCCCcEEeeEEEccCCC-CCC-CchHHhhcccccccC-CCCCeEEEE
Confidence 355666655433211112 47899999999999 665556554432432 111 222 23 33 899999999
Q ss_pred EEEEEe
Q 004301 727 VTFTVS 732 (762)
Q Consensus 727 vt~~~~ 732 (762)
++|+..
T Consensus 672 ~~l~~~ 677 (721)
T 2x41_A 672 LEIPVR 677 (721)
T ss_dssp EEEEGG
T ss_pred EEECHH
Confidence 999875
No 58
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=59.08 E-value=45 Score=37.56 Aligned_cols=88 Identities=10% Similarity=0.063 Sum_probs=53.7
Q ss_pred cCCceeeeccccccCCCcceEEEEEEEEecCC-CceE-EEEEeecCCCCeEEEEEcCeEEEeecCeeeEEEEEEEEecCC
Q 004301 658 NYPSFAVNIETAQSSSGSSVLKYTRSLTNVGP-PGTY-KVFITSSTGPGVKISVEPATLSFTQANEKKSYTVTFTVSSMP 735 (762)
Q Consensus 658 n~ps~~~~~~~~~~~~~~~~~~~~rtv~n~~~-~~~y-~~~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~ 735 (762)
..|.+++..+ ++.+++.+|+|-+. ...- ++++.. |.+.+++. ....+ ++|++++++++|+.+...
T Consensus 363 ~~~~~~~~~g--------~~~~~~~~vtn~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~~~ 429 (601)
T 1w8o_A 363 TIPDVALEPG--------QQVTVPVAVTNQSGIAVPKPSLQLDA--SPDWQVQG--SVEPL-MPGRQAKGQVTITVPAGT 429 (601)
T ss_dssp ECCCEEECTT--------CEEEEEEEEECCSSSCBSSCEEEEEC--CTTSEEEE--EECCB-CTTCEEEEEEEEECCTTC
T ss_pred cCccceecCC--------ceeEEEEEEECCCceeccCceEEEec--CCCcEEec--ccccc-CCCCceEEEEEEecCCCC
Confidence 3466666533 58899999999765 3222 344555 88988876 23444 678999998888887544
Q ss_pred CCCeEEEEEEEEcCceEEEeEEE
Q 004301 736 SNTNSFAHLEWSDGKYIVGSPIA 758 (762)
Q Consensus 736 ~~~~~~G~i~~~~~~~~v~~P~~ 758 (762)
..+.+.=-+.+......+...|.
T Consensus 430 ~~g~y~l~~~~~~~~~~~s~~~~ 452 (601)
T 1w8o_A 430 TPGRYRVGATLRTSAGNASTTFT 452 (601)
T ss_dssp CCEEEEEEEEEEETTEEEEEEEE
T ss_pred CCCcEEeeEEEEecCceeEEEEE
Confidence 43344444455543333333443
No 59
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=57.94 E-value=33 Score=39.78 Aligned_cols=56 Identities=16% Similarity=0.112 Sum_probs=37.4
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeecCCCCe-----EEEEEcCeEEEeecCeeeEEEEEEEEe
Q 004301 676 SVLKYTRSLTNVGP-PGTYKVFITSSTGPGV-----KISVEPATLSFTQANEKKSYTVTFTVS 732 (762)
Q Consensus 676 ~~~~~~rtv~n~~~-~~~y~~~~~~~~~~~~-----~v~v~p~~~~~~~~~~~~~~~vt~~~~ 732 (762)
...+++++|||+|+ ...-.+.+....|.+. +--.--+.+.+ ++||+++++++|+..
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l~~~ 674 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNL-TPGQSGTATFNIRRR 674 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEE-CTTCEEEEEEEEEGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhccccee-CCCCeEEEEEEEcHH
Confidence 46899999999999 7766666654324321 11111223445 899999999999875
No 60
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=54.15 E-value=27 Score=30.33 Aligned_cols=49 Identities=16% Similarity=0.126 Sum_probs=39.6
Q ss_pred EEEEEEEecCC-CceEEEEEeecCCCCeEEEEEcCeEEEeecCeeeEEEEEEEEe
Q 004301 679 KYTRSLTNVGP-PGTYKVFITSSTGPGVKISVEPATLSFTQANEKKSYTVTFTVS 732 (762)
Q Consensus 679 ~~~rtv~n~~~-~~~y~~~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 732 (762)
+.+.+|+|.++ ...|++.-.. |.-+. |.|..=.+ ++|++.++.|+..+.
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~--p~~Yr--VrP~~G~I-~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSN--NEHYR--VRPVYGFV-DAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESC--TTTEE--EECSEEEE-CTTCEEEEEEEECSC
T ss_pred EEEEEEECCCCCeEEEEEEecC--CCceE--EcCCceEE-CCCCeEEEEEEeCCC
Confidence 56788999999 8999988766 66655 56887655 899999999999875
No 61
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=53.80 E-value=28 Score=29.84 Aligned_cols=49 Identities=18% Similarity=0.190 Sum_probs=39.8
Q ss_pred EEEEEEEecCC-CceEEEEEeecCCCCeEEEEEcCeEEEeecCeeeEEEEEEEEe
Q 004301 679 KYTRSLTNVGP-PGTYKVFITSSTGPGVKISVEPATLSFTQANEKKSYTVTFTVS 732 (762)
Q Consensus 679 ~~~rtv~n~~~-~~~y~~~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 732 (762)
+-+.+|+|.++ ...|++.-.. |.-+. |.|..=.+ ++|++.++.|++.+.
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~--p~~y~--VrP~~G~I-~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSN--NNEYR--IAPVFGFV-DPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESC--SSSEE--EECSEEEE-CTTEEEEEEEEECSC
T ss_pred eEEEEEEcCCCCeEEEEEEeCC--CCceE--EcCCceEE-CCCCeEEEEEEeCCC
Confidence 45788999999 9999988776 66655 57887666 899999999999875
No 62
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=51.02 E-value=45 Score=28.76 Aligned_cols=24 Identities=21% Similarity=0.331 Sum_probs=19.7
Q ss_pred ceEEEEEEEEecCC--CceEEEEEee
Q 004301 676 SVLKYTRSLTNVGP--PGTYKVFITS 699 (762)
Q Consensus 676 ~~~~~~rtv~n~~~--~~~y~~~~~~ 699 (762)
...+|+.||+|.|. ...+.+.+..
T Consensus 19 ~~~ti~atVkN~G~~~a~~~~V~ly~ 44 (114)
T 2l0d_A 19 TVNTMTATIENQGNKDSTSFNVSLLV 44 (114)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEEE
T ss_pred CeEEEEEEEEECCCCCCCCEEEEEEE
Confidence 58999999999998 5667777665
No 63
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=49.33 E-value=32 Score=30.18 Aligned_cols=52 Identities=17% Similarity=0.125 Sum_probs=42.1
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeecCCCCeEEEEEcCeEEEeecCeeeEEEEEEEEe
Q 004301 676 SVLKYTRSLTNVGP-PGTYKVFITSSTGPGVKISVEPATLSFTQANEKKSYTVTFTVS 732 (762)
Q Consensus 676 ~~~~~~rtv~n~~~-~~~y~~~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 732 (762)
...+-+++|+|.++ ...|++.-.+ |.- ..|.|..=.+ +++++.++.|++.+.
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~--p~~--y~VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTA--PRR--YCVRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESC--GGG--EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCC--CCc--eEEeCCCcEE-CCCCeEEEEEEECcC
Confidence 35677899999999 9999988777 664 4567887666 799999999999874
No 64
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=47.46 E-value=5.2 Score=35.03 Aligned_cols=57 Identities=19% Similarity=0.250 Sum_probs=34.7
Q ss_pred EEEEEEEEecCCCceEEEEEeec-CCCCeEEEEEcCeEEEe-ecCeeeEEEEEEEEecCC
Q 004301 678 LKYTRSLTNVGPPGTYKVFITSS-TGPGVKISVEPATLSFT-QANEKKSYTVTFTVSSMP 735 (762)
Q Consensus 678 ~~~~rtv~n~~~~~~y~~~~~~~-~~~~~~v~v~p~~~~~~-~~~~~~~~~vt~~~~~~~ 735 (762)
..+..-|+|.+. .+|++.+... .|+|++++++|..++++ ..-.+++|.|++.....+
T Consensus 55 i~~~vDLs~l~~-G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~g~~ 113 (119)
T 2kq1_A 55 YEVFVDLTEAGE-GSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMINLE 113 (119)
T ss_dssp CEEEEECTTCCB-EEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCCCCC
T ss_pred EEEEEECccCCC-CeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEECCCc
Confidence 333444444443 3344333332 38999999999987765 445678888887665443
No 65
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=44.30 E-value=51 Score=28.90 Aligned_cols=50 Identities=22% Similarity=0.228 Sum_probs=40.8
Q ss_pred eEEEEEEEEecCC-CceEEEEEeecCCCCeEEEEEcCeEEEeecCeeeEEEEEEEE
Q 004301 677 VLKYTRSLTNVGP-PGTYKVFITSSTGPGVKISVEPATLSFTQANEKKSYTVTFTV 731 (762)
Q Consensus 677 ~~~~~rtv~n~~~-~~~y~~~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~vt~~~ 731 (762)
..+-.++|+|.++ ..-|++.-.+ |.-. .|.|..=.+ .++++..+.|++.+
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~--p~~y--~VrP~~Gii-~P~~s~~v~V~~q~ 76 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTN--MRRL--SVDPPCGVL-DPKEKVLMAVSCDT 76 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESC--TTTE--EEESCEEEE-CTTCEEEEEEEECC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCC--CCcE--EEECCCeEE-CCCCEEEEEEEecC
Confidence 3455788999999 9999998877 7765 457888777 79999999999877
No 66
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=43.71 E-value=46 Score=30.27 Aligned_cols=51 Identities=24% Similarity=0.107 Sum_probs=41.5
Q ss_pred eEEEEEEEEecCC-CceEEEEEeecCCCCeEEEEEcCeEEEeecCeeeEEEEEEEEe
Q 004301 677 VLKYTRSLTNVGP-PGTYKVFITSSTGPGVKISVEPATLSFTQANEKKSYTVTFTVS 732 (762)
Q Consensus 677 ~~~~~rtv~n~~~-~~~y~~~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 732 (762)
..+-.++|+|.++ ...|++.-.+ |.-. .|.|..=.+ +++++.++.|++.+.
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT~--p~~y--~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTTA--PEKY--RVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEESC--TTTE--EEESSEEEE-CTTCEEEEEEEECSS
T ss_pred eEEEEEEEEcCCCCeEEEEEECCC--CCce--eecCCCcEE-CCCCeEEEEEEecCc
Confidence 3455889999999 9999998777 7654 567988777 799999999999774
No 67
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=40.09 E-value=80 Score=37.27 Aligned_cols=69 Identities=17% Similarity=0.269 Sum_probs=43.4
Q ss_pred CccCCceeee--ccccccCCCcceEEEEEEEEecC-C-CceEEEEEeecCCCCeEEE------EEcCeEEEeecCeeeEE
Q 004301 656 DFNYPSFAVN--IETAQSSSGSSVLKYTRSLTNVG-P-PGTYKVFITSSTGPGVKIS------VEPATLSFTQANEKKSY 725 (762)
Q Consensus 656 ~ln~ps~~~~--~~~~~~~~~~~~~~~~rtv~n~~-~-~~~y~~~~~~~~~~~~~v~------v~p~~~~~~~~~~~~~~ 725 (762)
-|-|.+|... .+.. .. ...+++++|||+| + ...-.+.+....|.+ .+. .--..+.+ ++||++++
T Consensus 717 GLSYTtF~ys~~~l~v--~~--~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~-~~~~P~k~L~gF~kv~L-~pGes~~V 790 (845)
T 3abz_A 717 GLSYTTFELDISDFKV--TD--DKIAISVDVKNTGDKFAGSEVVQVYFSALNS-KVSRPVKELKGFEKVHL-EPGEKKTV 790 (845)
T ss_dssp CBCSSCEEEEEEEEEE--CS--SEEEEEEEEEECCSSCCEEEEEEEEEEESSC-SSCCCSCEEEEEEEEEE-CTTCEEEE
T ss_pred CCcceeEEEecccccc--cC--CeEEEEEEEEECCcCCCcceeeeeeEeCCCC-CcchhhheeccceeEEE-CCCCEEEE
Confidence 4667777766 4421 11 4789999999999 7 666555554422322 111 11223455 89999999
Q ss_pred EEEEE
Q 004301 726 TVTFT 730 (762)
Q Consensus 726 ~vt~~ 730 (762)
+++|+
T Consensus 791 ~~~l~ 795 (845)
T 3abz_A 791 NIDLE 795 (845)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 99999
No 68
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=39.86 E-value=21 Score=26.88 Aligned_cols=37 Identities=19% Similarity=0.072 Sum_probs=27.9
Q ss_pred cchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccc
Q 004301 541 SMSCPHVSGLAALLKAAHPEWSPAAIRSALMTTAYVS 577 (762)
Q Consensus 541 SmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~ 577 (762)
|-..|..--....|++.+|+++...|+..|...-.++
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~gdv 39 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNK 39 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTCH
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCCCH
Confidence 3344445556778999999999999999998765443
No 69
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=38.58 E-value=43 Score=30.26 Aligned_cols=51 Identities=18% Similarity=0.117 Sum_probs=41.4
Q ss_pred eEEEEEEEEecCC-CceEEEEEeecCCCCeEEEEEcCeEEEeecCeeeEEEEEEEEe
Q 004301 677 VLKYTRSLTNVGP-PGTYKVFITSSTGPGVKISVEPATLSFTQANEKKSYTVTFTVS 732 (762)
Q Consensus 677 ~~~~~rtv~n~~~-~~~y~~~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 732 (762)
..+-.++|+|.++ ...|++.-.+ |.-. .|.|..=.+ +++++.++.|++.+.
T Consensus 32 ~~~~~l~L~N~s~~~VaFKVKTT~--p~~y--~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 32 VVTTNLKLQNPSDRKVCFKVKTTA--PRRY--CVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp CCCEEEEEECCSSSCEEEEEEESC--TTSE--EEESSEEEC-CTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCcEEEEEECCC--CccE--EEcCCCcEE-CCCCeEEEEEEECCC
Confidence 4556789999999 9999998877 7765 457887666 799999999999874
No 70
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=31.25 E-value=1.7e+02 Score=28.22 Aligned_cols=68 Identities=15% Similarity=0.137 Sum_probs=42.6
Q ss_pred eEEEEEEEEecCCCceEEEE--EeecC-C--CCeEEEEEcCeEEEeecCeeeEEEEEEEEecCCCCCeEEEEEEE
Q 004301 677 VLKYTRSLTNVGPPGTYKVF--ITSST-G--PGVKISVEPATLSFTQANEKKSYTVTFTVSSMPSNTNSFAHLEW 746 (762)
Q Consensus 677 ~~~~~rtv~n~~~~~~y~~~--~~~~~-~--~~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~G~i~~ 746 (762)
...++++|+|.++ .-|-+. +.... . ...-+-|+|..+.+ ++++++.++|..+....|.+...-=+|.+
T Consensus 27 ~k~~sl~l~N~~~-~p~LvQswv~~~~~~~~~~~pFivtPPl~Rl-~p~~~q~lRI~~~~~~LP~DRESlf~lnv 99 (218)
T 4ay0_A 27 AAGVMVSVKNTQD-YPVLIQSRIYDENKEKESEDPFVVTPPLFRL-DAKQQNSLRIAQAGGVFPRDKESLKWLCV 99 (218)
T ss_dssp CSCEEEEEECCSS-SCEEEEEEEECTTSCCCSSCSEEEESSEEEE-CTTCEEEEEEEECSCCCCSSSCEEEEEEE
T ss_pred CcEEEEEEEcCCC-CCEEEEEEEecCCCCccccCCEEECCCeEEe-CCCCceEEEEEecCCCCCcCcEEEEEEEE
Confidence 4567889999876 234443 33211 1 12337789999999 79999999998766544555433333333
No 71
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=30.64 E-value=26 Score=30.65 Aligned_cols=55 Identities=15% Similarity=0.175 Sum_probs=33.7
Q ss_pred ceEEEEEEEEecCC--CceEEEEEeecCCC--CeEEEEEcCeEEEeecCeeeEEEEEEEEe
Q 004301 676 SVLKYTRSLTNVGP--PGTYKVFITSSTGP--GVKISVEPATLSFTQANEKKSYTVTFTVS 732 (762)
Q Consensus 676 ~~~~~~rtv~n~~~--~~~y~~~~~~~~~~--~~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 732 (762)
...+|+.||+|.|. ..-..+.+..+.|. |..+...+ .-.+ ++|++.+++|+++..
T Consensus 16 ~~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~gg~~vgt~t-v~~L-aaG~s~t~~v~~~~~ 74 (122)
T 2kut_A 16 EEITVSARVTNRGAAEAHNVPVAVYLGNPAQGGVEIGRDT-ISRI-PVGGTGLARVQWKAT 74 (122)
T ss_dssp CEEEEEEEEECCSSSCBCCCCEEECSSCTTTCCCCCBCCC-CSCB-CTTCEEECCEEEECC
T ss_pred CeEEEEEEEEeCCCcccCcEEEEEEeCCCccCCeEEeeEE-cccc-CCCCeEEEEEEEecC
Confidence 58999999999998 44455666553331 12222111 0123 788888877777665
No 72
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=29.59 E-value=1.8e+02 Score=25.16 Aligned_cols=69 Identities=10% Similarity=0.140 Sum_probs=39.2
Q ss_pred ceEEEEEEEEecCC-CceE--------EEEEeecCCCCeEEEE---------EcCeEEEeecCeeeEEEEEEEEecCCCC
Q 004301 676 SVLKYTRSLTNVGP-PGTY--------KVFITSSTGPGVKISV---------EPATLSFTQANEKKSYTVTFTVSSMPSN 737 (762)
Q Consensus 676 ~~~~~~rtv~n~~~-~~~y--------~~~~~~~~~~~~~v~v---------~p~~~~~~~~~~~~~~~vt~~~~~~~~~ 737 (762)
....++++|+|.++ +.+. .+.+.. ..|-.|-- -....++ ++|++++|+.++.....|..
T Consensus 18 ~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d--~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 18 EQIKFNMSLKNQSERAIEFQFSTGQKFELVVYD--SEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp SCEEEEEEEEECSSSCEEEEESSSCCEEEEEEC--TTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESSCCCSEE
T ss_pred CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEEC--CCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCCCCCCcc
Confidence 57999999999987 4332 233332 34432221 1224566 89999999999973111222
Q ss_pred CeEEEEEEEE
Q 004301 738 TNSFAHLEWS 747 (762)
Q Consensus 738 ~~~~G~i~~~ 747 (762)
..+.+++.=.
T Consensus 95 Ytl~a~l~~~ 104 (120)
T 3isy_A 95 YEVKVTFKGR 104 (120)
T ss_dssp EEEEEEECCE
T ss_pred EEEEEEEEee
Confidence 3355554433
No 73
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=29.34 E-value=1.1e+02 Score=29.54 Aligned_cols=65 Identities=12% Similarity=0.097 Sum_probs=40.6
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeecCCCC-eEEEEEcCeEEEeecCeeeEEEEEEEEecCCCCC-e--EEEEEEEE
Q 004301 676 SVLKYTRSLTNVGP-PGTYKVFITSSTGPG-VKISVEPATLSFTQANEKKSYTVTFTVSSMPSNT-N--SFAHLEWS 747 (762)
Q Consensus 676 ~~~~~~rtv~n~~~-~~~y~~~~~~~~~~~-~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~-~--~~G~i~~~ 747 (762)
...+.+.+++|+|+ +...+ .+.. .-| ..+.... -.+ ++|++.+++|++++... .+. | ....|+..
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~-~v~~--scgct~~~~~~--~~i-~PGe~~~i~v~~~~~~~-~g~~~~~~~~~i~v~ 203 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLH-SVTT--RNPALTAVPDR--TEI-KPGGSTLLRIAVDPQVM-KAEGWQSIAADISII 203 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEE-EEEE--CSTTEEEEESC--SEE-CTTCEEEEEEEECHHHH-HHTTCSEEEEEEEEE
T ss_pred CeEEEEEEEEECCCCCEEEE-EEEe--CCCCEeeecCC--ccC-CCCCEEEEEEEEecCCC-CCcccceeccEEEEE
Confidence 46778899999999 76654 3333 233 3333333 344 79999999999987633 122 1 45566555
No 74
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=28.53 E-value=2.6e+02 Score=27.67 Aligned_cols=60 Identities=17% Similarity=0.215 Sum_probs=39.9
Q ss_pred eEEEEEEEEecCCCceEEEE--EeecC----CC--CeEEEEEcCeEEEeecCeeeEEEEEEEEecCCCCC
Q 004301 677 VLKYTRSLTNVGPPGTYKVF--ITSST----GP--GVKISVEPATLSFTQANEKKSYTVTFTVSSMPSNT 738 (762)
Q Consensus 677 ~~~~~rtv~n~~~~~~y~~~--~~~~~----~~--~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~ 738 (762)
....+++|+|.++ ..|.+. ++... |+ ..-+.|+|..+.+ ++++++.++|..+...-|.+.
T Consensus 43 ~k~~sl~l~N~~~-~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~~~LP~Dr 110 (257)
T 3q48_A 43 EREVTLRVSNTSG-TPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLKAPLPTDR 110 (257)
T ss_dssp CSEEEEEEEECSS-SCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECCCCCCSSS
T ss_pred CcEEEEEEEeCCC-CeEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECCCCCCCCc
Confidence 4567889999876 234443 33210 11 2348889999999 799999999977654345443
No 75
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=27.36 E-value=43 Score=30.61 Aligned_cols=33 Identities=27% Similarity=0.246 Sum_probs=27.3
Q ss_pred eeccccchhhhHHHHHHHHHhhCCCCCHHHHHHH
Q 004301 536 IISGTSMSCPHVSGLAALLKAAHPEWSPAAIRSA 569 (762)
Q Consensus 536 ~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~ 569 (762)
.+.|-| =|+.|-|++|||.+.+-..+|++|.+.
T Consensus 78 ~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 78 HFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp CCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred EEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 344555 479999999999999999999998753
No 76
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=23.23 E-value=42 Score=30.19 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=27.9
Q ss_pred eeeccccchhhhHHHHHHHHHhhCCCCCHHHHHH
Q 004301 535 NIISGTSMSCPHVSGLAALLKAAHPEWSPAAIRS 568 (762)
Q Consensus 535 ~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~ 568 (762)
-.+.|.| =|+.|-|++|||.+.+-..+|++|.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4555666 47999999999999999999999865
No 77
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=21.40 E-value=2.4e+02 Score=29.34 Aligned_cols=54 Identities=17% Similarity=0.176 Sum_probs=33.0
Q ss_pred ceEEEEEEEEecCC-CceEEEEEee---------------cCCCCe----EEEEEcCeEEEeecCeeeEEEEEEEEe
Q 004301 676 SVLKYTRSLTNVGP-PGTYKVFITS---------------STGPGV----KISVEPATLSFTQANEKKSYTVTFTVS 732 (762)
Q Consensus 676 ~~~~~~rtv~n~~~-~~~y~~~~~~---------------~~~~~~----~v~v~p~~~~~~~~~~~~~~~vt~~~~ 732 (762)
++.+++.+|||.|+ +.. --+... ..|+.. .++|+|.+- + ++||++++.|+.+-.
T Consensus 264 R~l~~~~~VtN~g~~pvr-lgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~p-I-~PGETr~~~v~a~da 337 (382)
T 1yew_A 264 RAMRMKLTITNHGNSPIR-LGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSP-L-APGETRTVDVTASDA 337 (382)
T ss_dssp SEEEEEEEEEECSSSCEE-EEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSC-B-CTTCEEEEEEEEECH
T ss_pred cEEEEEEEEEcCCCCceE-eeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCC-c-CCCceeEEEEEeehH
Confidence 68999999999998 432 222211 113210 134555542 1 799999999888764
No 78
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=20.26 E-value=5.2e+02 Score=27.09 Aligned_cols=52 Identities=15% Similarity=0.070 Sum_probs=32.6
Q ss_pred ceEEEEEEEEecCC-CceEEEEEee------------c---CCCCe----EEEEEcCeEEEeecCeeeEEEEEEEEe
Q 004301 676 SVLKYTRSLTNVGP-PGTYKVFITS------------S---TGPGV----KISVEPATLSFTQANEKKSYTVTFTVS 732 (762)
Q Consensus 676 ~~~~~~rtv~n~~~-~~~y~~~~~~------------~---~~~~~----~v~v~p~~~~~~~~~~~~~~~vt~~~~ 732 (762)
++.+++.+|||.|+ +.... +... + .|+.. .++ +|. -+ .+||+++++|+++-.
T Consensus 298 R~l~~~~~VtN~g~~pvrlg-eF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~--pI-~PGETrt~~V~a~da 369 (419)
T 3rfr_A 298 RELTINVKVKNGTSQPVRLG-EYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDD--VI-APGESKEIVVKIQDA 369 (419)
T ss_dssp SEEEEEEEEECCSSSCBEEE-EEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCC--CB-CTTCEEEEEEEEECH
T ss_pred cEEEEEEEEecCCCCceEEe-eEEEccEEEeCcccccCCCCCchhhhhccCCC-CCC--Cc-CCCcceEEEEEeehH
Confidence 68999999999998 53221 2111 0 12211 133 555 34 799999999888764
No 79
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=20.24 E-value=2.2e+02 Score=28.03 Aligned_cols=64 Identities=13% Similarity=0.102 Sum_probs=40.1
Q ss_pred CccCCceeeeccccccCCCcceEEEEEEEEecCC-CceEEEEEeecCCCCeEEEEE-----cCeEEEeecCeeeEEEEEE
Q 004301 656 DFNYPSFAVNIETAQSSSGSSVLKYTRSLTNVGP-PGTYKVFITSSTGPGVKISVE-----PATLSFTQANEKKSYTVTF 729 (762)
Q Consensus 656 ~ln~ps~~~~~~~~~~~~~~~~~~~~rtv~n~~~-~~~y~~~~~~~~~~~~~v~v~-----p~~~~~~~~~~~~~~~vt~ 729 (762)
++|+|...+. + ....+..+|.|..+ ....++.+.. .+++..... ..++.+ ++++++++...+
T Consensus 85 ~~~LP~sv~r-------G--E~~~l~~~V~Ny~~~~~~v~V~l~~--~~~~~~~~~~~~~~~~~v~v-~a~~~~~v~f~i 152 (252)
T 3hrz_B 85 DLQMPYSVVK-------N--EQVEIRAILHNYVNEDIYVRVELLY--NPAFCSASTKGQRYRQQFPI-KALSSRAVPFVI 152 (252)
T ss_dssp EECCCSCEET-------T--CCEEEEEEEEECSSSCEEEEEEECC--CTTEEESCCSSCCEEEEEEE-CTTEEEEEEEEE
T ss_pred EcCCCcEEee-------C--CEEEEEEEEEcccCceEEEEEEEEc--CCceEeecCCCCceEEEEEE-CCCCeEEEEEEE
Confidence 5788986542 2 57889999999988 7666666655 344432211 123455 567777766666
Q ss_pred EE
Q 004301 730 TV 731 (762)
Q Consensus 730 ~~ 731 (762)
.+
T Consensus 153 ~p 154 (252)
T 3hrz_B 153 VP 154 (252)
T ss_dssp EE
T ss_pred Ee
Confidence 54
Done!