Query 004314
Match_columns 761
No_of_seqs 501 out of 3204
Neff 7.3
Searched_HMMs 46136
Date Thu Mar 28 21:17:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004314.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004314hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02205 alpha,alpha-trehalose 100.0 2E-181 4E-186 1604.3 77.2 758 1-760 1-765 (854)
2 PLN03064 alpha,alpha-trehalose 100.0 6E-154 1E-158 1359.1 71.5 661 60-760 93-771 (934)
3 PLN03063 alpha,alpha-trehalose 100.0 3E-145 6E-150 1295.4 72.1 663 58-760 8-681 (797)
4 PRK14501 putative bifunctional 100.0 8E-134 2E-138 1198.8 72.8 655 61-760 1-660 (726)
5 KOG1050 Trehalose-6-phosphate 100.0 7E-127 1E-131 1103.6 52.2 658 60-761 2-661 (732)
6 PRK10117 trehalose-6-phosphate 100.0 2E-120 4E-125 1008.8 47.9 455 61-549 2-456 (474)
7 TIGR02398 gluc_glyc_Psyn gluco 100.0 8E-119 2E-123 1006.8 48.6 462 66-546 1-482 (487)
8 PF00982 Glyco_transf_20: Glyc 100.0 2E-119 5E-124 1013.2 33.8 467 62-546 2-474 (474)
9 COG0380 OtsA Trehalose-6-phosp 100.0 6E-113 1E-117 943.5 44.5 466 57-547 11-480 (486)
10 TIGR02400 trehalose_OtsA alpha 100.0 2E-107 4E-112 919.8 48.8 454 62-545 1-455 (456)
11 cd03788 GT1_TPS Trehalose-6-Ph 100.0 9.8E-98 2E-102 846.1 50.5 459 62-544 1-459 (460)
12 TIGR02468 sucrsPsyn_pln sucros 100.0 1.5E-30 3.3E-35 310.0 41.9 508 202-760 312-959 (1050)
13 COG1877 OtsB Trehalose-6-phosp 100.0 3.4E-31 7.4E-36 275.3 15.3 180 578-761 5-186 (266)
14 PF02358 Trehalose_PPase: Treh 100.0 5.1E-30 1.1E-34 266.8 11.0 165 595-760 1-168 (235)
15 cd03792 GT1_Trehalose_phosphor 99.9 2.7E-25 5.8E-30 246.3 25.1 301 176-546 63-371 (372)
16 PLN02151 trehalose-phosphatase 99.9 1.9E-25 4.1E-30 240.6 18.2 167 587-760 94-272 (354)
17 PRK00654 glgA glycogen synthas 99.9 2.7E-24 5.8E-29 245.8 28.6 293 201-547 119-463 (466)
18 PRK15484 lipopolysaccharide 1, 99.9 9.1E-24 2E-28 235.2 31.1 269 201-546 100-377 (380)
19 PLN02939 transferase, transfer 99.9 9.5E-24 2.1E-28 248.6 32.7 298 202-548 612-968 (977)
20 TIGR00685 T6PP trehalose-phosp 99.9 3.5E-25 7.5E-30 231.8 17.4 166 589-760 1-170 (244)
21 PLN02580 trehalose-phosphatase 99.9 3.4E-25 7.4E-30 241.4 17.8 169 584-760 112-304 (384)
22 PLN02316 synthase/transferase 99.9 1.6E-23 3.5E-28 250.9 32.8 308 179-548 689-1035(1036)
23 TIGR02472 sucr_P_syn_N sucrose 99.9 9.9E-24 2.2E-28 239.4 27.3 296 202-544 116-438 (439)
24 PRK14098 glycogen synthase; Pr 99.9 1.6E-23 3.5E-28 240.0 29.2 318 178-547 120-486 (489)
25 TIGR02095 glgA glycogen/starch 99.9 1.2E-23 2.7E-28 240.8 27.6 292 201-545 129-471 (473)
26 PRK14099 glycogen synthase; Pr 99.9 5.6E-23 1.2E-27 235.3 29.6 294 202-548 135-480 (485)
27 PLN03017 trehalose-phosphatase 99.9 4.4E-24 9.5E-29 230.7 18.2 168 585-760 105-286 (366)
28 TIGR03449 mycothiol_MshA UDP-N 99.9 1.8E-22 3.9E-27 225.9 31.5 287 201-547 102-402 (405)
29 cd03818 GT1_ExpC_like This fam 99.9 9.1E-23 2E-27 228.2 26.5 284 197-541 86-395 (396)
30 PRK15427 colanic acid biosynth 99.9 2.5E-22 5.4E-27 225.6 28.6 275 201-546 119-405 (406)
31 TIGR02470 sucr_synth sucrose s 99.9 1.1E-21 2.4E-26 230.6 33.1 337 177-544 362-745 (784)
32 PLN02871 UDP-sulfoquinovose:DA 99.9 5.8E-22 1.3E-26 226.6 28.8 283 194-550 140-438 (465)
33 cd03796 GT1_PIG-A_like This fa 99.9 5.5E-22 1.2E-26 222.1 27.7 278 197-548 87-369 (398)
34 cd03791 GT1_Glycogen_synthase_ 99.9 8.4E-22 1.8E-26 225.6 28.9 310 181-544 111-474 (476)
35 TIGR02149 glgA_Coryne glycogen 99.9 2.9E-21 6.3E-26 214.3 30.0 285 201-547 84-387 (388)
36 PLN00142 sucrose synthase 99.9 2.6E-21 5.7E-26 227.3 29.5 333 176-544 384-768 (815)
37 cd03800 GT1_Sucrose_synthase T 99.9 4.6E-21 9.9E-26 212.5 29.4 284 202-541 103-397 (398)
38 cd03813 GT1_like_3 This family 99.9 2E-21 4.2E-26 222.8 26.2 276 199-542 172-472 (475)
39 TIGR03088 stp2 sugar transfera 99.9 7.1E-21 1.5E-25 210.6 29.3 231 256-546 136-372 (374)
40 cd04951 GT1_WbdM_like This fam 99.9 1E-20 2.3E-25 206.2 28.5 280 192-544 73-358 (360)
41 cd05844 GT1_like_7 Glycosyltra 99.9 1.7E-20 3.8E-25 205.9 27.5 274 193-541 77-365 (367)
42 cd03819 GT1_WavL_like This fam 99.9 4.1E-20 9E-25 201.6 27.5 268 195-531 75-349 (355)
43 cd03806 GT1_ALG11_like This fa 99.9 2.9E-20 6.2E-25 209.8 26.5 273 198-535 107-415 (419)
44 cd04962 GT1_like_5 This family 99.9 1E-19 2.3E-24 200.1 30.3 286 187-546 74-370 (371)
45 PRK10187 trehalose-6-phosphate 99.9 8E-21 1.7E-25 201.1 18.3 162 591-760 14-177 (266)
46 PRK15490 Vi polysaccharide bio 99.9 5.5E-20 1.2E-24 207.8 25.7 290 192-546 274-575 (578)
47 cd03812 GT1_CapH_like This fam 99.9 5.8E-20 1.3E-24 200.6 25.3 257 194-519 76-338 (358)
48 PRK10307 putative glycosyl tra 99.9 2.6E-19 5.7E-24 201.2 30.9 283 201-548 107-409 (412)
49 cd03805 GT1_ALG2_like This fam 99.9 1.2E-19 2.5E-24 201.7 27.3 281 200-539 94-391 (392)
50 PLN02949 transferase, transfer 99.9 2.5E-19 5.4E-24 203.7 29.4 315 150-548 108-458 (463)
51 PRK15179 Vi polysaccharide bio 99.9 1E-19 2.2E-24 214.1 26.7 281 195-543 397-690 (694)
52 cd03809 GT1_mtfB_like This fam 99.8 1.3E-19 2.8E-24 197.1 24.5 272 202-541 87-364 (365)
53 cd03822 GT1_ecORF704_like This 99.8 3.2E-19 6.8E-24 194.0 27.6 277 202-544 78-365 (366)
54 cd03793 GT1_Glycogen_synthase_ 99.8 1.3E-18 2.8E-23 196.7 30.6 346 153-545 105-585 (590)
55 cd03799 GT1_amsK_like This is 99.8 7.4E-19 1.6E-23 191.3 27.9 264 201-538 80-353 (355)
56 cd03821 GT1_Bme6_like This fam 99.8 6E-19 1.3E-23 191.1 26.7 274 201-541 88-374 (375)
57 cd03807 GT1_WbnK_like This fam 99.8 7.5E-19 1.6E-23 189.6 27.2 280 195-543 77-363 (365)
58 TIGR02918 accessory Sec system 99.8 9.6E-19 2.1E-23 200.7 29.4 271 200-545 211-498 (500)
59 cd04946 GT1_AmsK_like This fam 99.8 1.2E-18 2.5E-23 196.1 29.0 272 198-541 125-406 (407)
60 PRK10125 putative glycosyl tra 99.8 2.2E-19 4.7E-24 201.5 23.0 187 299-545 212-403 (405)
61 cd03801 GT1_YqgM_like This fam 99.8 1.5E-18 3.2E-23 186.3 28.2 283 193-544 80-373 (374)
62 cd03817 GT1_UGDG_like This fam 99.8 1.1E-18 2.3E-23 189.3 26.9 267 194-532 80-362 (374)
63 cd03794 GT1_wbuB_like This fam 99.8 1.6E-18 3.4E-23 188.5 27.3 275 201-540 100-393 (394)
64 cd03814 GT1_like_2 This family 99.8 1.5E-18 3.3E-23 188.3 26.5 273 195-544 80-363 (364)
65 PLN02501 digalactosyldiacylgly 99.8 2.5E-19 5.4E-24 204.3 20.8 318 137-543 379-706 (794)
66 PHA01633 putative glycosyl tra 99.8 2.3E-19 4.9E-24 194.6 18.5 194 304-541 118-334 (335)
67 cd03798 GT1_wlbH_like This fam 99.8 3.1E-18 6.7E-23 184.7 27.3 278 201-545 94-375 (377)
68 PLN02846 digalactosyldiacylgly 99.8 1.1E-18 2.5E-23 196.2 22.8 268 193-545 111-390 (462)
69 cd04949 GT1_gtfA_like This fam 99.8 1.3E-18 2.7E-23 192.3 22.4 277 185-538 86-370 (372)
70 cd03820 GT1_amsD_like This fam 99.8 4E-18 8.7E-23 182.3 24.1 259 202-541 85-347 (348)
71 cd03823 GT1_ExpE7_like This fa 99.8 1E-17 2.2E-22 181.1 26.7 262 192-542 90-355 (359)
72 PRK09922 UDP-D-galactose:(gluc 99.8 3.5E-18 7.6E-23 188.7 21.9 240 192-514 78-326 (359)
73 cd03816 GT1_ALG1_like This fam 99.8 7.4E-18 1.6E-22 190.0 24.8 273 201-542 96-409 (415)
74 cd03808 GT1_cap1E_like This fa 99.8 1.3E-17 2.7E-22 179.3 25.1 275 195-541 77-358 (359)
75 PHA01630 putative group 1 glyc 99.8 1.3E-17 2.8E-22 182.2 22.6 211 256-545 94-329 (331)
76 cd03795 GT1_like_4 This family 99.8 2.9E-17 6.4E-22 178.9 23.9 259 201-530 84-349 (357)
77 TIGR03087 stp1 sugar transfera 99.8 6.4E-17 1.4E-21 181.2 27.1 216 255-545 171-395 (397)
78 cd03802 GT1_AviGT4_like This f 99.8 8.3E-17 1.8E-21 174.1 24.0 240 201-542 88-332 (335)
79 cd04955 GT1_like_6 This family 99.7 1.9E-16 4E-21 173.2 25.2 265 202-544 86-362 (363)
80 cd03804 GT1_wbaZ_like This fam 99.7 1.3E-16 2.9E-21 175.0 23.5 196 254-539 151-349 (351)
81 cd03811 GT1_WabH_like This fam 99.7 9.8E-17 2.1E-21 171.6 21.9 245 197-511 80-328 (353)
82 cd03825 GT1_wcfI_like This fam 99.7 1.8E-16 3.8E-21 173.3 24.1 194 299-545 159-363 (365)
83 PLN02275 transferase, transfer 99.7 3.2E-16 6.9E-21 174.1 21.8 236 202-510 102-371 (371)
84 PRK05749 3-deoxy-D-manno-octul 99.7 1.5E-15 3.3E-20 171.7 27.1 285 191-545 117-418 (425)
85 COG0297 GlgA Glycogen synthase 99.7 4.5E-15 9.7E-20 167.5 26.7 297 201-547 131-478 (487)
86 TIGR01484 HAD-SF-IIB HAD-super 99.7 3.5E-16 7.6E-21 159.0 12.5 158 593-760 1-166 (204)
87 PF00534 Glycos_transf_1: Glyc 99.6 1.7E-15 3.6E-20 149.0 13.2 154 334-525 13-170 (172)
88 KOG1111 N-acetylglucosaminyltr 99.6 1.7E-14 3.8E-19 151.5 12.4 240 203-511 92-334 (426)
89 cd04950 GT1_like_1 Glycosyltra 99.6 2.7E-13 5.9E-18 150.8 21.5 266 198-546 100-371 (373)
90 PLN02605 monogalactosyldiacylg 99.5 1.2E-11 2.6E-16 138.1 24.7 191 300-542 174-377 (382)
91 PTZ00174 phosphomannomutase; P 99.4 6.8E-12 1.5E-16 131.7 16.9 168 589-760 3-191 (247)
92 COG0561 Cof Predicted hydrolas 99.4 5E-12 1.1E-16 133.9 16.0 161 590-760 2-192 (264)
93 TIGR01485 SPP_plant-cyano sucr 99.4 3.3E-12 7.2E-17 134.2 12.3 158 591-760 1-170 (249)
94 PLN02423 phosphomannomutase 99.3 2.3E-11 5E-16 127.5 16.7 161 591-760 7-192 (245)
95 KOG0853 Glycosyltransferase [C 99.3 7.1E-11 1.5E-15 131.9 20.1 184 336-548 273-465 (495)
96 PRK13609 diacylglycerol glucos 99.3 5.8E-10 1.3E-14 124.2 26.0 268 188-547 94-372 (380)
97 PRK15126 thiamin pyrimidine py 99.3 5.2E-11 1.1E-15 126.7 15.7 71 591-665 2-73 (272)
98 COG0438 RfaG Glycosyltransfera 99.3 1.3E-10 2.9E-15 122.8 18.5 197 300-546 173-376 (381)
99 PRK00726 murG undecaprenyldiph 99.3 2.3E-10 5E-15 126.2 21.0 256 192-544 85-355 (357)
100 cd01635 Glycosyltransferase_GT 99.3 7.8E-11 1.7E-15 119.0 15.7 111 341-488 109-220 (229)
101 PRK10976 putative hydrolase; P 99.2 4.6E-11 1E-15 126.6 13.0 71 591-665 2-73 (266)
102 cd03785 GT1_MurG MurG is an N- 99.2 1.1E-09 2.4E-14 120.1 23.1 246 192-534 83-345 (350)
103 PRK10513 sugar phosphate phosp 99.2 8.5E-11 1.8E-15 124.8 13.6 71 591-665 3-77 (270)
104 TIGR00236 wecB UDP-N-acetylglu 99.2 1E-09 2.2E-14 121.6 21.8 252 187-513 76-335 (365)
105 PRK01158 phosphoglycolate phos 99.2 1.7E-10 3.6E-15 119.4 14.5 71 591-665 3-74 (230)
106 PF08282 Hydrolase_3: haloacid 99.2 3.6E-10 7.8E-15 117.2 15.3 157 594-760 1-189 (254)
107 TIGR00099 Cof-subfamily Cof su 99.2 3.1E-10 6.8E-15 119.6 14.6 70 593-666 1-71 (256)
108 PRK03669 mannosyl-3-phosphogly 99.2 4E-10 8.6E-15 120.0 15.2 73 590-666 6-80 (271)
109 PRK13608 diacylglycerol glucos 99.2 3.9E-09 8.4E-14 118.4 23.6 270 191-551 97-376 (391)
110 cd03786 GT1_UDP-GlcNAc_2-Epime 99.2 2.8E-09 6.1E-14 117.5 21.7 252 186-514 77-339 (363)
111 TIGR01133 murG undecaprenyldip 99.1 1.4E-09 3E-14 119.1 18.8 180 302-538 153-346 (348)
112 TIGR01487 SPP-like sucrose-pho 99.1 7E-10 1.5E-14 113.8 14.3 72 591-666 1-73 (215)
113 TIGR02463 MPGP_rel mannosyl-3- 99.1 4.5E-10 9.7E-15 115.7 12.2 69 593-665 1-71 (221)
114 TIGR02471 sucr_syn_bact_C sucr 99.1 6.2E-10 1.3E-14 116.0 12.3 152 593-760 1-162 (236)
115 PRK10530 pyridoxal phosphate ( 99.1 2.5E-09 5.3E-14 113.5 15.3 71 591-665 3-74 (272)
116 TIGR01482 SPP-subfamily Sucros 99.1 1.2E-09 2.6E-14 112.5 12.5 69 594-666 1-70 (225)
117 PLN02887 hydrolase family prot 99.1 2.8E-09 6.1E-14 123.7 16.7 73 589-665 306-388 (580)
118 TIGR02094 more_P_ylases alpha- 99.0 1.1E-07 2.3E-12 111.5 29.6 182 334-543 387-597 (601)
119 TIGR01486 HAD-SF-IIB-MPGP mann 99.0 2.3E-09 5E-14 113.1 14.0 71 593-667 1-72 (256)
120 PLN02382 probable sucrose-phos 99.0 1.8E-09 3.8E-14 121.4 13.1 161 587-760 5-178 (413)
121 PF13692 Glyco_trans_1_4: Glyc 98.9 2.3E-09 4.9E-14 101.0 7.8 128 336-511 2-134 (135)
122 PRK00025 lpxB lipid-A-disaccha 98.9 6.7E-08 1.4E-12 107.5 20.9 141 328-514 175-343 (380)
123 PRK14502 bifunctional mannosyl 98.9 6.3E-09 1.4E-13 120.5 12.7 74 589-666 414-488 (694)
124 PRK09814 beta-1,6-galactofuran 98.9 1.3E-07 2.8E-12 103.8 21.3 251 193-542 58-327 (333)
125 PRK00192 mannosyl-3-phosphogly 98.9 7E-09 1.5E-13 110.5 10.4 72 591-666 4-76 (273)
126 PRK12702 mannosyl-3-phosphogly 98.9 8.8E-09 1.9E-13 108.5 10.5 71 591-665 1-72 (302)
127 KOG1387 Glycosyltransferase [C 98.9 1.4E-07 2.9E-12 99.5 18.4 182 335-546 268-458 (465)
128 PF05116 S6PP: Sucrose-6F-phos 98.8 3.3E-09 7.2E-14 111.4 4.0 156 590-760 1-168 (247)
129 TIGR03713 acc_sec_asp1 accesso 98.8 8E-07 1.7E-11 102.8 22.5 255 182-514 203-490 (519)
130 TIGR02461 osmo_MPG_phos mannos 98.8 4.7E-08 1E-12 101.3 11.2 69 593-666 1-70 (225)
131 cd04299 GT1_Glycogen_Phosphory 98.7 8.1E-06 1.7E-10 97.7 29.2 181 337-545 479-688 (778)
132 PF05693 Glycogen_syn: Glycoge 98.7 2.6E-06 5.7E-11 97.1 23.0 300 203-542 146-577 (633)
133 TIGR00215 lpxB lipid-A-disacch 98.5 1.5E-05 3.3E-10 89.3 21.8 134 335-513 190-348 (385)
134 COG1519 KdtA 3-deoxy-D-manno-o 98.4 0.00015 3.2E-09 79.9 26.2 301 183-531 32-404 (419)
135 PF13524 Glyco_trans_1_2: Glyc 98.2 4.7E-06 1E-10 73.4 7.1 87 435-541 1-91 (92)
136 COG3769 Predicted hydrolase (H 98.1 3.8E-05 8.2E-10 76.7 12.3 72 590-666 6-79 (274)
137 smart00775 LNS2 LNS2 domain. T 98.1 6E-06 1.3E-10 80.7 6.7 71 593-664 1-89 (157)
138 KOG3189 Phosphomannomutase [Li 98.0 4.6E-05 9.9E-10 74.9 11.5 166 585-759 5-195 (252)
139 TIGR02919 accessory Sec system 97.9 0.00012 2.6E-09 83.1 13.8 132 333-514 281-413 (438)
140 TIGR01689 EcbF-BcbF capsule bi 97.8 4.2E-05 9.1E-10 71.6 6.2 51 592-643 2-55 (126)
141 PF03332 PMM: Eukaryotic phosp 97.7 0.00041 9E-09 70.3 11.9 143 616-760 1-165 (220)
142 TIGR01684 viral_ppase viral ph 97.4 0.00041 8.9E-09 73.5 7.3 75 590-665 125-202 (301)
143 cd01427 HAD_like Haloacid deha 97.3 0.00024 5.1E-09 65.7 4.8 70 593-663 1-79 (139)
144 PHA03398 viral phosphatase sup 96.8 0.0027 5.9E-08 67.5 6.8 73 590-664 127-203 (303)
145 TIGR01681 HAD-SF-IIIC HAD-supe 96.6 0.0039 8.4E-08 58.7 5.7 55 592-647 1-65 (128)
146 TIGR01662 HAD-SF-IIIA HAD-supe 96.5 0.0031 6.8E-08 59.2 4.9 57 592-649 1-70 (132)
147 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.4 0.0021 4.5E-08 68.1 3.1 50 592-642 2-51 (257)
148 PRK10444 UMP phosphatase; Prov 96.4 0.0021 4.4E-08 67.7 2.9 54 591-649 1-54 (248)
149 PF02684 LpxB: Lipid-A-disacch 96.4 0.37 8.1E-06 53.7 20.6 250 198-515 82-343 (373)
150 TIGR01452 PGP_euk phosphoglyco 96.3 0.0025 5.4E-08 68.3 2.9 50 591-645 2-51 (279)
151 PLN02645 phosphoglycolate phos 96.2 0.0045 9.8E-08 67.4 4.6 53 590-647 27-79 (311)
152 PF08323 Glyco_transf_5: Starc 96.1 0.021 4.6E-07 59.9 9.0 85 188-273 118-232 (245)
153 TIGR01670 YrbI-phosphatas 3-de 96.1 0.0019 4.2E-08 62.8 0.9 58 591-649 1-65 (154)
154 TIGR01457 HAD-SF-IIA-hyp2 HAD- 96.1 0.0061 1.3E-07 64.2 4.6 52 592-648 2-56 (249)
155 TIGR01672 AphA HAD superfamily 96.0 0.012 2.5E-07 61.5 6.3 63 574-637 46-139 (237)
156 COG0763 LpxB Lipid A disacchar 96.0 1 2.2E-05 49.8 21.2 273 177-538 69-372 (381)
157 TIGR01664 DNA-3'-Pase DNA 3'-p 96.0 0.01 2.2E-07 58.6 5.3 49 590-639 12-69 (166)
158 PRK09484 3-deoxy-D-manno-octul 96.0 0.005 1.1E-07 61.7 3.0 59 590-649 20-85 (183)
159 COG2179 Predicted hydrolase of 95.4 0.063 1.4E-06 52.2 7.9 61 586-649 23-83 (175)
160 KOG2941 Beta-1,4-mannosyltrans 95.3 0.67 1.5E-05 50.2 15.8 168 335-542 254-434 (444)
161 PF13439 Glyco_transf_4: Glyco 95.1 0.068 1.5E-06 51.4 7.6 98 192-314 74-177 (177)
162 PF13344 Hydrolase_6: Haloacid 94.3 0.012 2.7E-07 53.0 0.1 49 594-647 1-49 (101)
163 TIGR01656 Histidinol-ppas hist 94.2 0.048 1E-06 52.5 3.9 47 592-639 1-54 (147)
164 TIGR03492 conserved hypothetic 94.0 0.81 1.7E-05 51.6 13.9 138 337-513 208-365 (396)
165 TIGR01668 YqeG_hyp_ppase HAD s 94.0 0.14 3E-06 50.6 6.9 56 589-647 23-79 (170)
166 PRK11009 aphA acid phosphatase 93.9 0.13 2.8E-06 53.7 6.8 62 576-638 48-140 (237)
167 PF08645 PNK3P: Polynucleotide 93.9 0.06 1.3E-06 52.7 4.1 43 592-635 1-52 (159)
168 PF02350 Epimerase_2: UDP-N-ac 93.9 13 0.00028 41.2 24.0 256 185-512 55-318 (346)
169 PTZ00445 p36-lilke protein; Pr 93.8 0.13 2.8E-06 52.2 6.1 61 578-639 30-102 (219)
170 PRK06769 hypothetical protein; 93.7 0.062 1.3E-06 53.3 3.8 50 589-639 2-55 (173)
171 PF09419 PGP_phosphatase: Mito 93.7 0.13 2.8E-06 50.8 5.8 63 572-638 24-87 (168)
172 PHA02530 pseT polynucleotide k 93.6 0.14 2.9E-06 55.3 6.6 58 590-648 157-223 (300)
173 TIGR00213 GmhB_yaeD D,D-heptos 93.5 0.064 1.4E-06 53.2 3.4 47 592-639 2-53 (176)
174 COG1778 Low specificity phosph 93.3 0.077 1.7E-06 51.0 3.5 60 588-649 5-72 (170)
175 PF13844 Glyco_transf_41: Glyc 93.2 0.95 2.1E-05 51.8 12.6 103 334-457 283-385 (468)
176 PRK08942 D,D-heptose 1,7-bisph 92.5 0.099 2.1E-06 52.0 3.2 47 591-638 3-55 (181)
177 TIGR01663 PNK-3'Pase polynucle 92.4 0.16 3.5E-06 59.0 5.2 50 589-639 166-224 (526)
178 TIGR03568 NeuC_NnaA UDP-N-acet 92.1 9.2 0.0002 42.6 18.5 73 413-511 263-338 (365)
179 TIGR01675 plant-AP plant acid 92.0 0.25 5.5E-06 51.2 5.4 57 590-647 76-158 (229)
180 TIGR01459 HAD-SF-IIA-hyp4 HAD- 91.8 0.23 5E-06 51.9 5.1 47 590-641 7-53 (242)
181 TIGR01533 lipo_e_P4 5'-nucleot 91.8 0.13 2.9E-06 54.6 3.3 54 589-643 73-149 (266)
182 TIGR00338 serB phosphoserine p 91.7 0.27 5.8E-06 50.2 5.3 36 612-648 86-121 (219)
183 PF13579 Glyco_trans_4_4: Glyc 91.6 0.31 6.8E-06 45.8 5.4 68 201-273 74-146 (160)
184 TIGR01680 Veg_Stor_Prot vegeta 91.6 0.2 4.3E-06 53.0 4.2 75 590-665 100-198 (275)
185 TIGR01460 HAD-SF-IIA Haloacid 91.5 0.24 5.2E-06 51.7 4.8 50 594-648 1-53 (236)
186 PLN02954 phosphoserine phospha 91.5 0.25 5.5E-06 50.6 5.0 35 613-648 86-120 (224)
187 PRK09552 mtnX 2-hydroxy-3-keto 91.4 0.3 6.4E-06 50.2 5.4 36 612-648 75-110 (219)
188 TIGR01261 hisB_Nterm histidino 91.4 0.17 3.8E-06 49.6 3.4 46 591-637 1-54 (161)
189 PRK13225 phosphoglycolate phos 90.9 0.36 7.8E-06 51.6 5.5 36 613-649 144-179 (273)
190 PRK05446 imidazole glycerol-ph 90.9 0.28 6E-06 54.3 4.7 47 590-637 1-55 (354)
191 TIGR01686 FkbH FkbH-like domai 90.9 0.47 1E-05 51.9 6.5 58 590-648 2-67 (320)
192 TIGR01491 HAD-SF-IB-PSPlk HAD- 90.6 0.52 1.1E-05 47.1 6.1 34 614-648 83-116 (201)
193 PRK13582 thrH phosphoserine ph 90.1 0.28 6.1E-06 49.5 3.7 34 613-648 70-103 (205)
194 PRK11133 serB phosphoserine ph 89.8 0.79 1.7E-05 50.2 7.1 35 612-647 182-216 (322)
195 KOG3742 Glycogen synthase [Car 89.4 5.3 0.00012 44.7 12.8 70 425-511 493-577 (692)
196 COG0381 WecB UDP-N-acetylgluco 89.4 32 0.0007 38.4 18.9 136 336-514 205-343 (383)
197 TIGR01488 HAD-SF-IB Haloacid D 89.2 0.64 1.4E-05 45.5 5.4 35 613-648 75-109 (177)
198 TIGR01685 MDP-1 magnesium-depe 89.1 0.62 1.3E-05 46.3 5.1 56 591-647 2-81 (174)
199 smart00577 CPDc catalytic doma 89.0 0.63 1.4E-05 44.8 5.1 58 590-649 1-81 (148)
200 TIGR03590 PseG pseudaminic aci 88.6 1.9 4.2E-05 46.1 8.9 92 335-457 170-261 (279)
201 PRK13288 pyrophosphatase PpaX; 87.6 0.68 1.5E-05 47.1 4.5 34 614-648 85-118 (214)
202 TIGR03333 salvage_mtnX 2-hydro 87.0 1.2 2.7E-05 45.5 6.0 37 612-649 71-107 (214)
203 COG0647 NagD Predicted sugar p 86.8 0.81 1.8E-05 48.7 4.6 46 590-640 7-52 (269)
204 TIGR01426 MGT glycosyltransfer 86.8 12 0.00026 41.7 14.4 98 417-540 279-386 (392)
205 TIGR02726 phenyl_P_delta pheny 86.5 0.55 1.2E-05 46.5 3.0 58 591-649 7-71 (169)
206 TIGR01489 DKMTPPase-SF 2,3-dik 86.4 1.3 2.9E-05 43.6 5.7 35 613-648 74-108 (188)
207 PF03767 Acid_phosphat_B: HAD 86.1 0.094 2E-06 54.5 -2.8 76 589-665 70-168 (229)
208 PRK10826 2-deoxyglucose-6-phos 86.0 1 2.2E-05 46.2 4.8 34 614-648 95-128 (222)
209 TIGR03351 PhnX-like phosphonat 85.3 1.4 3.1E-05 44.9 5.5 34 614-648 90-123 (220)
210 TIGR01456 CECR5 HAD-superfamil 85.2 1.4 3E-05 48.2 5.7 48 593-644 2-55 (321)
211 PF07429 Glyco_transf_56: 4-al 84.6 12 0.00027 41.0 12.2 132 343-508 192-329 (360)
212 PRK13222 phosphoglycolate phos 83.2 1.4 3E-05 44.9 4.3 35 613-648 95-129 (226)
213 COG0546 Gph Predicted phosphat 82.9 1.7 3.7E-05 44.7 4.9 36 612-648 90-125 (220)
214 PF03031 NIF: NLI interacting 82.9 1.1 2.4E-05 43.4 3.2 56 592-649 1-72 (159)
215 COG0637 Predicted phosphatase/ 82.6 1.8 4E-05 44.6 4.9 35 612-647 87-121 (221)
216 COG0560 SerB Phosphoserine pho 82.6 1.1 2.3E-05 46.1 3.2 35 612-647 78-112 (212)
217 cd03784 GT1_Gtf_like This fami 82.5 11 0.00024 42.1 11.5 73 414-511 290-371 (401)
218 COG3882 FkbH Predicted enzyme 82.3 4.6 9.9E-05 45.8 8.0 80 578-658 209-301 (574)
219 PF06941 NT5C: 5' nucleotidase 81.9 0.65 1.4E-05 46.6 1.3 29 611-640 73-101 (191)
220 COG0707 MurG UDP-N-acetylgluco 81.7 49 0.0011 36.8 16.0 85 423-530 243-340 (357)
221 COG0816 Predicted endonuclease 81.3 9.5 0.00021 36.6 8.8 73 353-435 40-112 (141)
222 PLN02940 riboflavin kinase 80.0 2.2 4.8E-05 47.9 4.8 33 614-647 96-128 (382)
223 PLN02779 haloacid dehalogenase 80.0 0.99 2.1E-05 48.6 1.9 28 578-605 27-54 (286)
224 PF08235 LNS2: LNS2 (Lipin/Ned 79.4 2.9 6.2E-05 40.8 4.7 55 593-648 1-66 (157)
225 PLN02575 haloacid dehalogenase 78.9 2.4 5.2E-05 47.4 4.5 34 614-648 219-252 (381)
226 KOG1050 Trehalose-6-phosphate 78.1 0.15 3.2E-06 61.3 -5.6 175 577-759 175-384 (732)
227 TIGR02245 HAD_IIID1 HAD-superf 78.0 4 8.7E-05 41.4 5.4 58 588-647 18-79 (195)
228 TIGR01490 HAD-SF-IB-hyp1 HAD-s 77.4 4 8.7E-05 40.9 5.4 36 612-648 88-123 (202)
229 TIGR02250 FCP1_euk FCP1-like p 76.4 4.4 9.6E-05 39.5 5.1 60 588-649 3-94 (156)
230 TIGR02251 HIF-SF_euk Dullard-l 75.6 4.8 0.0001 39.4 5.2 57 591-649 1-78 (162)
231 PF12689 Acid_PPase: Acid Phos 75.5 2.8 6E-05 41.5 3.4 56 591-647 3-81 (169)
232 PF06258 Mito_fiss_Elm1: Mitoc 74.7 17 0.00036 39.7 9.5 108 327-457 135-250 (311)
233 COG3914 Spy Predicted O-linked 74.6 42 0.00091 39.2 12.8 101 338-457 432-532 (620)
234 PF12000 Glyco_trans_4_3: Gkyc 74.6 25 0.00054 34.9 9.9 50 178-229 42-93 (171)
235 PRK10725 fructose-1-P/6-phosph 74.3 3.4 7.3E-05 40.9 3.8 16 590-605 4-19 (188)
236 PRK08238 hypothetical protein; 74.1 6.8 0.00015 45.3 6.7 36 613-649 74-109 (479)
237 PF06888 Put_Phosphatase: Puta 72.9 4.7 0.0001 42.1 4.5 37 612-648 72-109 (234)
238 PRK14089 ipid-A-disaccharide s 72.8 1.6E+02 0.0035 32.7 19.1 27 426-457 229-255 (347)
239 PF05152 DUF705: Protein of un 72.2 9.8 0.00021 40.5 6.6 58 590-648 121-178 (297)
240 COG0241 HisB Histidinol phosph 71.9 4.2 9.2E-05 40.6 3.8 45 591-636 5-55 (181)
241 PRK11590 hypothetical protein; 71.9 2 4.4E-05 43.8 1.6 15 590-604 5-19 (211)
242 PF13477 Glyco_trans_4_2: Glyc 71.7 13 0.00028 34.5 7.0 40 192-233 68-108 (139)
243 PRK11587 putative phosphatase; 71.0 3.8 8.3E-05 41.8 3.4 16 590-605 2-17 (218)
244 TIGR02009 PGMB-YQAB-SF beta-ph 71.0 4.2 9.2E-05 39.9 3.6 27 592-625 2-28 (185)
245 TIGR02252 DREG-2 REG-2-like, H 70.6 2.8 6E-05 42.1 2.2 14 592-605 1-14 (203)
246 COG4359 Uncharacterized conser 70.5 6.4 0.00014 39.2 4.5 57 613-673 75-137 (220)
247 PRK14988 GMP/IMP nucleotidase; 69.0 2.6 5.7E-05 43.5 1.7 33 614-647 96-128 (224)
248 PHA02597 30.2 hypothetical pro 68.7 2.3 5E-05 42.6 1.2 15 591-605 2-16 (197)
249 PRK13223 phosphoglycolate phos 68.4 4.5 9.7E-05 43.1 3.3 15 591-605 13-27 (272)
250 TIGR01548 HAD-SF-IA-hyp1 haloa 67.5 2.4 5.2E-05 42.5 1.0 13 593-605 2-14 (197)
251 PRK10748 flavin mononucleotide 67.0 5.6 0.00012 41.3 3.7 16 590-605 9-24 (238)
252 PF00343 Phosphorylase: Carboh 65.8 1.6E+02 0.0035 35.8 15.6 134 334-488 442-582 (713)
253 KOG3120 Predicted haloacid deh 65.7 11 0.00024 38.6 5.2 21 587-607 9-29 (256)
254 PRK10563 6-phosphogluconate ph 65.3 6.2 0.00014 40.2 3.6 17 590-606 3-19 (221)
255 TIGR01422 phosphonatase phosph 64.9 3.4 7.3E-05 43.3 1.5 30 617-647 105-134 (253)
256 PLN02770 haloacid dehalogenase 64.9 3.7 8E-05 43.0 1.8 32 616-648 113-144 (248)
257 PLN03243 haloacid dehalogenase 64.9 4.6 0.0001 42.8 2.6 32 616-648 114-145 (260)
258 TIGR01990 bPGM beta-phosphoglu 64.0 5.9 0.00013 38.9 3.0 27 593-626 1-27 (185)
259 TIGR02253 CTE7 HAD superfamily 63.9 8 0.00017 39.2 4.1 16 591-606 2-17 (221)
260 PRK13226 phosphoglycolate phos 62.2 7 0.00015 40.3 3.3 15 591-605 12-26 (229)
261 TIGR02254 YjjG/YfnB HAD superf 62.1 4.9 0.00011 40.7 2.1 16 591-606 1-16 (224)
262 PRK13478 phosphonoacetaldehyde 60.8 4.4 9.6E-05 42.8 1.5 31 616-647 106-136 (267)
263 PF06437 ISN1: IMP-specific 5' 60.5 20 0.00043 39.7 6.4 134 571-710 123-299 (408)
264 TIGR01545 YfhB_g-proteo haloac 59.9 5.4 0.00012 40.8 1.9 33 614-647 97-130 (210)
265 PRK02797 4-alpha-L-fucosyltran 59.5 57 0.0012 35.5 9.5 111 343-488 153-265 (322)
266 TIGR01993 Pyr-5-nucltdase pyri 59.2 5.1 0.00011 39.6 1.5 13 593-605 2-14 (184)
267 PRK01021 lpxB lipid-A-disaccha 58.9 3.8E+02 0.0083 32.0 19.7 27 426-457 482-508 (608)
268 PRK09449 dUMP phosphatase; Pro 58.4 5.2 0.00011 40.8 1.5 14 591-604 3-16 (224)
269 TIGR01549 HAD-SF-IA-v1 haloaci 57.9 7.9 0.00017 36.8 2.6 13 593-605 1-13 (154)
270 PRK00109 Holliday junction res 55.5 1.2E+02 0.0025 29.0 10.1 69 355-433 43-111 (138)
271 TIGR00250 RNAse_H_YqgF RNAse H 55.3 74 0.0016 30.0 8.6 71 353-433 35-105 (130)
272 COG4641 Uncharacterized protei 54.6 41 0.00088 37.4 7.6 114 414-546 239-361 (373)
273 TIGR01428 HAD_type_II 2-haloal 53.3 7 0.00015 39.0 1.5 14 592-605 2-15 (198)
274 TIGR01454 AHBA_synth_RP 3-amin 53.2 9 0.0002 38.5 2.3 25 594-625 1-25 (205)
275 KOG2884 26S proteasome regulat 52.3 1.7E+02 0.0036 30.2 10.7 45 475-523 187-236 (259)
276 TIGR02137 HSK-PSP phosphoserin 50.9 7 0.00015 39.8 1.0 36 611-648 68-103 (203)
277 TIGR01493 HAD-SF-IA-v2 Haloaci 50.8 7.1 0.00015 38.1 1.0 13 593-605 1-13 (175)
278 KOG2882 p-Nitrophenyl phosphat 50.3 12 0.00026 40.1 2.7 59 590-653 21-79 (306)
279 TIGR01449 PGP_bact 2-phosphogl 50.1 12 0.00026 37.7 2.5 29 594-629 1-29 (213)
280 COG4087 Soluble P-type ATPase 49.5 14 0.0003 34.9 2.6 48 594-647 17-64 (152)
281 TIGR02247 HAD-1A3-hyp Epoxide 49.0 8.5 0.00018 38.9 1.3 15 591-605 2-16 (211)
282 PF09949 DUF2183: Uncharacteri 47.7 41 0.00089 30.3 5.3 29 352-384 49-77 (100)
283 COG1168 MalY Bifunctional PLP- 47.5 4.5E+02 0.0098 29.5 14.1 80 370-451 157-240 (388)
284 KOG2134 Polynucleotide kinase 46.5 15 0.00032 40.8 2.6 84 588-672 72-178 (422)
285 PRK14986 glycogen phosphorylas 46.0 2.6E+02 0.0057 34.6 13.2 136 335-488 542-681 (815)
286 TIGR01525 ATPase-IB_hvy heavy 45.9 25 0.00055 41.5 4.8 65 584-649 357-422 (556)
287 COG3700 AphA Acid phosphatase 44.2 36 0.00079 33.8 4.6 67 576-642 48-144 (237)
288 PRK06698 bifunctional 5'-methy 44.1 11 0.00025 43.2 1.5 14 592-605 242-255 (459)
289 COG5083 SMP2 Uncharacterized p 43.3 12 0.00027 41.8 1.5 73 588-664 372-452 (580)
290 PF13528 Glyco_trans_1_3: Glyc 41.0 1.2E+02 0.0026 32.3 8.9 115 334-508 191-316 (318)
291 TIGR01509 HAD-SF-IA-v3 haloaci 40.9 11 0.00025 36.5 0.8 13 593-605 1-13 (183)
292 PLN00414 glycosyltransferase f 40.6 5.9E+02 0.013 29.2 14.7 108 418-547 317-441 (446)
293 PRK09456 ?-D-glucose-1-phospha 40.4 16 0.00034 36.7 1.6 14 592-605 1-14 (199)
294 cd04300 GT1_Glycogen_Phosphory 39.4 4.5E+02 0.0098 32.6 13.8 137 334-488 528-668 (797)
295 KOG1618 Predicted phosphatase 39.4 23 0.0005 38.3 2.7 44 591-638 35-82 (389)
296 PF12710 HAD: haloacid dehalog 38.9 14 0.00031 36.3 1.1 29 618-647 96-124 (192)
297 PRK04128 1-(5-phosphoribosyl)- 38.5 72 0.0016 33.1 6.3 61 578-647 31-93 (228)
298 COG1011 Predicted hydrolase (H 37.9 18 0.00038 36.8 1.6 17 590-606 3-19 (229)
299 COG3660 Predicted nucleoside-d 37.9 2.7E+02 0.0058 29.8 10.0 32 202-236 72-103 (329)
300 COG4996 Predicted phosphatase 37.3 60 0.0013 30.7 4.7 55 592-647 1-76 (164)
301 COG1819 Glycosyl transferases, 36.1 3.5E+02 0.0077 30.6 11.8 99 417-543 288-397 (406)
302 PF13419 HAD_2: Haloacid dehal 36.0 14 0.00029 35.3 0.4 11 594-604 1-11 (176)
303 KOG1615 Phosphoserine phosphat 35.5 42 0.00091 33.9 3.6 34 613-647 90-123 (227)
304 COG0058 GlgP Glucan phosphoryl 33.3 2.5E+02 0.0053 34.4 10.2 130 335-488 486-616 (750)
305 PF04464 Glyphos_transf: CDP-G 33.3 6.8E+02 0.015 27.4 14.2 233 204-514 81-338 (369)
306 TIGR01511 ATPase-IB1_Cu copper 33.1 45 0.00098 39.5 4.2 61 588-649 382-442 (562)
307 PF11019 DUF2608: Protein of u 32.6 68 0.0015 33.9 5.0 67 579-646 7-115 (252)
308 TIGR01497 kdpB K+-transporting 31.4 80 0.0017 38.3 5.8 69 580-649 415-483 (675)
309 COG4822 CbiK Cobalamin biosynt 30.3 6.3E+02 0.014 26.2 14.4 159 235-435 33-193 (265)
310 PF00702 Hydrolase: haloacid d 28.9 28 0.00061 34.6 1.4 12 592-603 2-13 (215)
311 PRK12446 undecaprenyldiphospho 28.7 3.3E+02 0.0072 30.0 9.9 69 424-513 244-326 (352)
312 COG2503 Predicted secreted aci 28.1 49 0.0011 34.6 2.8 59 588-647 76-158 (274)
313 TIGR00661 MJ1255 conserved hyp 27.9 93 0.002 33.7 5.3 67 424-512 239-314 (321)
314 PF06189 5-nucleotidase: 5'-nu 27.4 1.1E+02 0.0023 32.5 5.2 51 591-641 121-199 (264)
315 PRK11033 zntA zinc/cadmium/mer 27.0 82 0.0018 38.7 5.1 66 583-649 540-605 (741)
316 PF14639 YqgF: Holliday-juncti 26.2 42 0.0009 32.6 1.9 69 562-640 2-75 (150)
317 PLN02919 haloacid dehalogenase 26.1 51 0.0011 42.2 3.1 15 591-605 75-89 (1057)
318 PF10933 DUF2827: Protein of u 26.1 3.5E+02 0.0075 30.2 9.0 157 335-530 189-347 (364)
319 PRK13587 1-(5-phosphoribosyl)- 26.1 1.6E+02 0.0035 30.6 6.4 61 576-647 147-212 (234)
320 TIGR02093 P_ylase glycogen/sta 25.6 6.3E+02 0.014 31.3 11.9 136 334-487 525-664 (794)
321 PRK14057 epimerase; Provisiona 25.5 4.5E+02 0.0098 27.9 9.5 66 372-441 157-223 (254)
322 PRK14985 maltodextrin phosphor 25.5 5.4E+02 0.012 31.9 11.3 135 335-487 528-666 (798)
323 cd07018 S49_SppA_67K_type Sign 24.2 1E+02 0.0022 31.7 4.5 45 595-639 2-57 (222)
324 PRK10422 lipopolysaccharide co 24.1 6.7E+02 0.015 27.4 11.3 88 334-440 182-270 (352)
325 TIGR01106 ATPase-IIC_X-K sodiu 24.0 1.2E+02 0.0026 38.7 5.9 39 610-649 567-605 (997)
326 PF12038 DUF3524: Domain of un 23.8 2.1E+02 0.0047 28.3 6.2 78 201-280 60-143 (168)
327 PF03652 UPF0081: Uncharacteri 23.7 78 0.0017 30.0 3.2 70 353-432 38-108 (135)
328 PF04312 DUF460: Protein of un 22.6 75 0.0016 30.3 2.8 52 591-646 43-96 (138)
329 TIGR01522 ATPase-IIA2_Ca golgi 22.0 1.2E+02 0.0027 38.0 5.3 67 582-649 494-565 (884)
330 KOG4626 O-linked N-acetylgluco 21.8 5.3E+02 0.012 30.9 9.7 87 352-457 773-859 (966)
331 PRK01122 potassium-transportin 21.2 1.6E+02 0.0035 35.7 5.9 68 581-649 415-482 (679)
332 PRK08091 ribulose-phosphate 3- 20.7 3.9E+02 0.0086 27.8 7.9 66 372-441 143-209 (228)
333 PRK10671 copA copper exporting 20.1 1.5E+02 0.0032 37.0 5.5 66 582-648 621-686 (834)
No 1
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=1.6e-181 Score=1604.29 Aligned_cols=758 Identities=71% Similarity=1.221 Sum_probs=721.1
Q ss_pred CCcccccchhhcccCCCCCCCCcccccCCccccccccccccccccccCCCCCCCC-CCCCCCeEEEEEcCCccceeecCC
Q 004314 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVP-SSVAQDRVIIVANQLPVKAKRRPD 79 (761)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~iivsnrlP~~~~~~~~ 79 (761)
|+||||+|||||++|++..++ ++.+++|++|++||+++++|+++..+.+++.+ +..+.+|+||||||||+.++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~ 78 (854)
T PLN02205 1 MVSRSYSNLLELASGESPSFG--RMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSD 78 (854)
T ss_pred CcChhhccHHHhccCCccccc--ccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCC
Confidence 899999999999999999999 88999999999999999999988877777666 556678999999999999998755
Q ss_pred C-CCeEEeecCCchhHhhhccCCC-CCceEEEEccCCCCCcchhhhhHHhhccCeeEEEeecChhhhhhhhhcccccccc
Q 004314 80 N-KGWSFSWDEDSLLLQLKDGLPE-DMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLW 157 (761)
Q Consensus 80 ~-~~~~~~~~~~~l~~~l~~~~~~-~~~~~wvG~~~~~~~~~~~~~v~~~l~~~~~~~pv~l~~~~~~~~y~gf~~~~LW 157 (761)
+ ++|+|++++|||+++|++++.. ..+++||||++.++++++|+++.+.++++|+|+||||+++++++||+||||++||
T Consensus 79 g~~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LW 158 (854)
T PLN02205 79 GSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLW 158 (854)
T ss_pred CCcceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhcccc
Confidence 4 7899999999999999988864 4789999999998888888888888888999999999999999999999999999
Q ss_pred ccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCc
Q 004314 158 PLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPS 237 (761)
Q Consensus 158 pl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~ 237 (761)
|+|||+++..|+++.+|+++.|++|++||++||++|+++++|++|+|||||||||+||+|||+++|+++||||||||||+
T Consensus 159 PlfH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs 238 (854)
T PLN02205 159 PLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS 238 (854)
T ss_pred chhccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCC
Confidence 99999988888877799999999999999999999999999867999999999999999999999999999999999999
Q ss_pred hhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhh
Q 004314 238 SEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVL 317 (761)
Q Consensus 238 ~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~ 317 (761)
+|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++..++|.++++|+||+++|+++|+|||++.|...+
T Consensus 239 ~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~ 318 (854)
T PLN02205 239 SEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVL 318 (854)
T ss_pred hHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888888999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHcC--CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHH
Q 004314 318 RLADKDWRVQELKQQFE--GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEI 395 (761)
Q Consensus 318 ~~~~~~~~~~~lr~~~~--~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev 395 (761)
..+++.+++++++++++ |+++|+||||||++|||.+||+|||+||++||+|+||++||||++|+|+++++|+++++++
T Consensus 319 ~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev 398 (854)
T PLN02205 319 SLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAET 398 (854)
T ss_pred cChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHH
Confidence 99999999999999995 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCC--CCC
Q 004314 396 HATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSA--PKK 473 (761)
Q Consensus 396 ~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~--~~~ 473 (761)
+++|++||++||+.+|+||+|+.+.++++|+.|||++||||+|||+|||||||++||+|||++++.++++++.++ +++
T Consensus 399 ~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~ 478 (854)
T PLN02205 399 HSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKK 478 (854)
T ss_pred HHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999998877777666555 478
Q ss_pred ceEEEcCCCCCcccccCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHHHHhhcc
Q 004314 474 SMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCKDHFK 553 (761)
Q Consensus 474 g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~~~~~~~ 553 (761)
|+||+|||+||+++|+||++|||||++++|+||.+||+||++||+.||++++++|++||+.+|+++||++|+++|+++++
T Consensus 479 gvLiLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~ 558 (854)
T PLN02205 479 SMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSR 558 (854)
T ss_pred CceEeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccccccCcccceeeeecCcccccCCHHHHHHHHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEE
Q 004314 554 RRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFV 633 (761)
Q Consensus 554 ~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~I 633 (761)
++||++|||++||+++++++|++|++++++++|+++++|+|+|||||||+|+.+....|+++++++|++||++++|.|+|
T Consensus 559 ~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaI 638 (854)
T PLN02205 559 RRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFI 638 (854)
T ss_pred hhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999987667789999999999999999999999
Q ss_pred EcCCChhhHHhhccCCCCceEEccCCeEEeecCCcceeecCcCcCcchHHHHHHHHHHHhcCCCccEEEecCceEEEEcc
Q 004314 634 VSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHR 713 (761)
Q Consensus 634 vSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~~~w~~~~~~~~~~w~~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr 713 (761)
+|||+++.|++||+++++++++||||++++++++..|+......+..|++.+.++|+.|+++|||++||.|+++++||||
T Consensus 639 vSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR 718 (854)
T PLN02205 639 VSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYE 718 (854)
T ss_pred EeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehh
Confidence 99999999999999988899999999999998777898654444678999999999999999999999999999999999
Q ss_pred cCCCCCchHHHHHHHHHHHHHhcCCCcEEEeCCeEEEEEeCCCCcCC
Q 004314 714 DADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 714 ~ad~d~~~~qa~el~~~L~~~l~~~~v~V~~G~~~vEV~p~gvnKG~ 760 (761)
++||+++.+||+++.++++..+.+.++.|.+|+++|||+|+|+|||.
T Consensus 719 ~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~ 765 (854)
T PLN02205 719 DADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGL 765 (854)
T ss_pred hCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHH
Confidence 99999999999999999999998888899999999999999999995
No 2
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=6e-154 Score=1359.06 Aligned_cols=661 Identities=36% Similarity=0.687 Sum_probs=606.3
Q ss_pred CCeEEEEEcCCccceeecCCCCCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCcc-hhhhhHHhhccCeeEEEee
Q 004314 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLS-EQDDVSQLLLDRFKCVPAF 138 (761)
Q Consensus 60 ~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~~-~~~~v~~~l~~~~~~~pv~ 138 (761)
++|+||||||||+.++++++ |.|.++++.|||+++|.+ + ...+++||||+|..++.+ +++.+.+ .+.+|+|+|||
T Consensus 93 ~~rlIiVSNRlPv~~~~~~~-g~~~~~~s~GGLvsaL~~-~-~~~~~~WVGw~g~~~~~~~~~~~~~~-~l~~~~~~pV~ 168 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRGE-DSWSLEISAGGLVSALLG-V-KEFEARWIGWAGVNVPDEVGQKALTK-ALAEKRCIPVF 168 (934)
T ss_pred CCCEEEEECCCCcceeecCC-CceEEeECCCCcHHHhcc-c-ccCCeEEEeeCCCCCCCcchhHHHHH-HhccCceEEEe
Confidence 68999999999999988654 789999999999999975 5 578999999999877653 4555544 45789999999
Q ss_pred cChhhhhhhhhccccccccccccccc-cCC--CCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHH
Q 004314 139 LPPDILTKFYHGFCKQHLWPLFHYML-PFS--ATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLP 215 (761)
Q Consensus 139 l~~~~~~~~y~gf~~~~LWpl~H~~~-~~~--~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp 215 (761)
|+++++++||+||||++|||+|||+. +.. ++ ..+|++++|++|++||++||++|+++++| +|+|||||||||+||
T Consensus 169 l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~-~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-gD~VWVHDYHL~LlP 246 (934)
T PLN03064 169 LDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLA-TTRSFQSQFAAYKKANQMFADVVNEHYEE-GDVVWCHDYHLMFLP 246 (934)
T ss_pred CCHHHHHHHHHHhhhcccchhhcCcCCCcccccc-cccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHH
Confidence 99999999999999999999999973 211 11 14688899999999999999999999987 599999999999999
Q ss_pred HHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEc
Q 004314 216 TFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYY 295 (761)
Q Consensus 216 ~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~ 295 (761)
+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||.|++|++... .++.++
T Consensus 247 ~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~----~~v~~~ 322 (934)
T PLN03064 247 KCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGVEDQ 322 (934)
T ss_pred HHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccC----CeEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999999987543 358899
Q ss_pred CeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEE
Q 004314 296 GRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLV 375 (761)
Q Consensus 296 gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLv 375 (761)
||.++|.++|+|||++.|...+..+++.+++++++++++|+++|+||||||++|||.+||+||++||++||+|++|||||
T Consensus 323 Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLv 402 (934)
T PLN03064 323 GRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLL 402 (934)
T ss_pred CEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEE
Confidence 99999999999999999999988899999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheee
Q 004314 376 QIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVC 455 (761)
Q Consensus 376 qi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~ 455 (761)
||+.|+|+++++|+++++++.++|++||++||+.+|.||+|+.+.++++++.|||++|||||+||+|||||||++|||||
T Consensus 403 QIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~ 482 (934)
T PLN03064 403 QIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (934)
T ss_pred EEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc-cCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHH
Q 004314 456 RQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVA 534 (761)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~ 534 (761)
|.+ ++|+||+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+.
T Consensus 483 ~~~-------------~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~ 549 (934)
T PLN03064 483 QDS-------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQ 549 (934)
T ss_pred hcC-------------CCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHH
Confidence 873 57899999999999999 4899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccccccCcccceeeeecCcccccCCHHHHHHHHHhccceeEEecCCCcCCCCCCC------
Q 004314 535 YWARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSI------ 608 (761)
Q Consensus 535 ~Wa~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~~------ 608 (761)
+|+++|+.+|.++...+.. ++. . -+.+|+.+.++++|+++++|+|+|||||||+|+.+.
T Consensus 550 ~Wa~~fl~~L~~~~~~~~~-~~~-----------~---~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~ 614 (934)
T PLN03064 550 EWAETFVSELNDTVVEAQL-RTR-----------Q---VPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGD 614 (934)
T ss_pred HHHHHHHHHHHHHHhhhhc-ccc-----------c---cCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccc
Confidence 9999999999988654321 111 1 124799999999999999999999999999997632
Q ss_pred -----CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecCCcceee-cCcCcCcchH
Q 004314 609 -----NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQN-CGQSVDFGWI 682 (761)
Q Consensus 609 -----~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~~~w~~-~~~~~~~~w~ 682 (761)
...|+++++++|++||+||+|+|+|+|||+++.|++||+.+ +++++||||++++.++ ..|++ +....+.+|+
T Consensus 615 ~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~~-~~w~~~~~~~~~~~W~ 692 (934)
T PLN03064 615 QIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHTK-GEWMTTMPEHLNMDWV 692 (934)
T ss_pred cccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecCC-CcceeccccccchHHH
Confidence 45688999999999999999999999999999999999987 7999999999999874 58984 3333467899
Q ss_pred HHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHH-HHHhcCCCcEEEeCCeEEEEEeCCCCcCC
Q 004314 683 QIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHL-ESVLANEPAAVKSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 683 ~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L-~~~l~~~~v~V~~G~~~vEV~p~gvnKG~ 760 (761)
+.+.++|++|+++|||++||+|+++++||||++||++|..||+++.++| +..+.+.++.|+.|+++|||+|.|+|||.
T Consensus 693 ~~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~ 771 (934)
T PLN03064 693 DSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGA 771 (934)
T ss_pred HHHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHH
Confidence 9999999999999999999999999999999999999999999999999 45566778999999999999999999996
No 3
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=2.7e-145 Score=1295.36 Aligned_cols=663 Identities=36% Similarity=0.690 Sum_probs=600.9
Q ss_pred CCCCeEEEEEcCCccceeecCCCCCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCcc-hhhhhHHhhccCeeEEE
Q 004314 58 VAQDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLS-EQDDVSQLLLDRFKCVP 136 (761)
Q Consensus 58 ~~~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~~-~~~~v~~~l~~~~~~~p 136 (761)
...+|+||||||||+.+.+++ +|+|+++++.|||+.+|.+ +. ..+++||||+|.+++++ ++..+. ..+.+|+|+|
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~-~~~~~~~~~~ggl~~al~~-~~-~~~~~Wvgw~g~~~~~~~~~~~~~-~~~~~~~~~p 83 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTG-EDSWSLEMSPGGLVSALLG-VK-EFETKWIGWPGVDVHDEIGKAALT-ESLAEKGCIP 83 (797)
T ss_pred cCCCCEEEEECCCCccceecC-CCceEEeeCCCCHHHHHHH-HH-hcCceEEEeCCCcCCcccchhHHH-HHhhcCCeEE
Confidence 357899999999999988764 3799999999999999986 44 57999999999876554 333333 4467899999
Q ss_pred eecChhhhhhhhhccccccccccccccc-cCCCC-CCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchH
Q 004314 137 AFLPPDILTKFYHGFCKQHLWPLFHYML-PFSAT-HGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVL 214 (761)
Q Consensus 137 v~l~~~~~~~~y~gf~~~~LWpl~H~~~-~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~ll 214 (761)
||| ++++++||+||||++|||+|||+. +..+. ...+|+++.|++|++||++||++|++.++| +|+|||||||||+|
T Consensus 84 v~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWvhDYhL~ll 161 (797)
T PLN03063 84 VFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEE-GDVVWCHDYHLMFL 161 (797)
T ss_pred eeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhhH
Confidence 999 999999999999999999999982 32222 114566789999999999999999999987 59999999999999
Q ss_pred HHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEE
Q 004314 215 PTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEY 294 (761)
Q Consensus 215 p~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~ 294 (761)
|+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|++.... ++.+
T Consensus 162 p~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i~~ 237 (797)
T PLN03063 162 PQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVD 237 (797)
T ss_pred HHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ceEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999875432 4779
Q ss_pred cCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeE
Q 004314 295 YGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVL 374 (761)
Q Consensus 295 ~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvL 374 (761)
+|+.++|.++|+|||++.|.+....+++.+...+++++++++++|++|||||+.|||.++|+||++|+++||+++++++|
T Consensus 238 ~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvL 317 (797)
T PLN03063 238 QGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVML 317 (797)
T ss_pred CCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEE
Confidence 99999999999999999998877667777777788888999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhhee
Q 004314 375 VQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIV 454 (761)
Q Consensus 375 vqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama 454 (761)
|||++|+|+++++|+++++++++++++||++||+.+|.||+|+.+.++.+++.++|++|||||+||++||||||++||||
T Consensus 318 vqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA 397 (797)
T PLN03063 318 VQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVA 397 (797)
T ss_pred EEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCH
Q 004314 455 CRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDV 533 (761)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 533 (761)
||.+ ++|++|+|||+|+++.++ +|++|||||++++|+||.++|+|+++||+.|+++++++|++||+
T Consensus 398 ~g~p-------------~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~ 464 (797)
T PLN03063 398 CQKA-------------KKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSA 464 (797)
T ss_pred eecC-------------CCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCH
Confidence 9973 478999999999999994 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccCcccceeeeecCcccccCCHHHHHHHHHhccceeEEecCCCcCCCCCC-----C
Q 004314 534 AYWARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTS-----I 608 (761)
Q Consensus 534 ~~Wa~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~-----~ 608 (761)
.+|+++|+++|+++++.+..+. ...+.+|+.+.++++|+++++|+|+|||||||+++.+ .
T Consensus 465 ~~Wa~~fl~~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~ 529 (797)
T PLN03063 465 QKWADDFMSELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIKEM 529 (797)
T ss_pred HHHHHHHHHHHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccccc
Confidence 9999999999999887653210 1234579999999999999999999999999998754 4
Q ss_pred CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecCCcceeecC-cCcCcchHHHHHH
Q 004314 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCG-QSVDFGWIQIAEP 687 (761)
Q Consensus 609 ~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~~~w~~~~-~~~~~~w~~~v~~ 687 (761)
.+.|+++++++|++|++|++|.|+|+|||+++.|++||+++ +++++||||++++.+ +.+|++.. ...+.+|++.+.+
T Consensus 530 ~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~-~~~w~~~~~~~~~~~w~~~v~~ 607 (797)
T PLN03063 530 DLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHT-SGEWVTTMPEHMNLDWVDGVKN 607 (797)
T ss_pred cCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecC-CCceeeccccccChhHHHHHHH
Confidence 46799999999999999999999999999999999999975 699999999999976 45898543 2346789999999
Q ss_pred HHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHH-HHhcCCCcEEEeCCeEEEEEeCCCCcCC
Q 004314 688 VMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLE-SVLANEPAAVKSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 688 im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~-~~l~~~~v~V~~G~~~vEV~p~gvnKG~ 760 (761)
+|+.|+++|||++||+|+++++||||++||+++..||+++.++|. ..+.+.+++|+.|+++|||+|+|+|||.
T Consensus 608 ~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~ 681 (797)
T PLN03063 608 VFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGA 681 (797)
T ss_pred HHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHH
Confidence 999999999999999999999999999999999999999999994 4556678999999999999999999995
No 4
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=8.3e-134 Score=1198.79 Aligned_cols=655 Identities=35% Similarity=0.660 Sum_probs=599.9
Q ss_pred CeEEEEEcCCccceeecCCCCCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCc---chhhhhHHhhccCeeEEEe
Q 004314 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDL---SEQDDVSQLLLDRFKCVPA 137 (761)
Q Consensus 61 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~---~~~~~v~~~l~~~~~~~pv 137 (761)
+|+||||||||+.+++++ |+|+++++.|||+.+|.+.+. ..+++||||+|.+.+. +++.++. ..+.+|+|+||
T Consensus 1 ~~livvsnr~p~~~~~~~--~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~v 76 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED--GGVELTPSVGGLATGLRSFHE-RGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVPV 76 (726)
T ss_pred CCEEEEEcCCCcceeecC--CceEEeeCCCchHHHHHHHhh-cCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEEE
Confidence 489999999999998764 589999999999999987655 5899999999976553 2223333 45678999999
Q ss_pred ecChhhhhhhhhccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHH
Q 004314 138 FLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTF 217 (761)
Q Consensus 138 ~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~ 217 (761)
||++++++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++| +|+|||||||||+||++
T Consensus 77 ~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~-~d~vwvhDYhl~l~p~~ 150 (726)
T PRK14501 77 FLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARP-GDVVWVHDYQLMLLPAM 150 (726)
T ss_pred eCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCchhhhHHHH
Confidence 99999999999999999999999999876 4799999999999999999999999997 59999999999999999
Q ss_pred HHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCe
Q 004314 218 LRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGR 297 (761)
Q Consensus 218 lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr 297 (761)
||++.|+++||||||+|||++|+|+++|+|++||+|||+||+|||||++|++||++||.++++++... ..+.+.|+
T Consensus 151 lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~----~~~~~~gr 226 (726)
T PRK14501 151 LRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETEL----GEIRLGGR 226 (726)
T ss_pred HHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCC----CeEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999986432 25789999
Q ss_pred EEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEE
Q 004314 298 TVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQI 377 (761)
Q Consensus 298 ~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 377 (761)
.++|.++|+|||++.|.+....+++.+..+++|+.++++++|++|||+++.||+..+|+||++|++++|+++|+++|+||
T Consensus 227 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v 306 (726)
T PRK14501 227 IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQV 306 (726)
T ss_pred EEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEE
Confidence 99999999999999999887777777777888888899999999999999999999999999999999999999999999
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeec
Q 004314 378 ANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (761)
Q Consensus 378 ~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 457 (761)
+.|+|.+.++|+++++++.+++++||++||+.+|.||+++.+.+++++++++|++|||||+||++||||||++||||||.
T Consensus 307 ~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~ 386 (726)
T PRK14501 307 AVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT 386 (726)
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcC
Confidence 99998877999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCCCCceEEEcCCCCCcccccCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHH
Q 004314 458 GVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWA 537 (761)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa 537 (761)
+ +.|++|+|+++|+++++.+|++|||||++++|+||.++|+||.+|++.|+++++++|.+||+..|+
T Consensus 387 ~-------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~ 453 (726)
T PRK14501 387 D-------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWA 453 (726)
T ss_pred C-------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 3 367999999999999998999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccccccCcccceeeeecCcccccCCHHHHHHHHHhccceeEEecCCCcCCCCC--CCCCCCCHH
Q 004314 538 RSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQT--SINKAPSQA 615 (761)
Q Consensus 538 ~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~--~~~~~p~~~ 615 (761)
++|+.++.++++.+.... ...|+.|+.+.++++|+++++|+|++||||||++.. +..+.|+++
T Consensus 454 ~~~l~~l~~~~~~~~~~~---------------~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~ 518 (726)
T PRK14501 454 SDFLDELREAAEKNKAFA---------------SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKE 518 (726)
T ss_pred HHHHHHHHHHHhhhhccc---------------cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCCHH
Confidence 999999999887653211 123567899999999999999999999999999864 245678999
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecCCcceeecCcCcCcchHHHHHHHHHHHhcC
Q 004314 616 VISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTES 695 (761)
Q Consensus 616 ~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~~~w~~~~~~~~~~w~~~v~~im~~y~~~ 695 (761)
++++|++|++|+++.|+|+|||++..|+++|+.+ ++++|||||++++.++ ..|..... .+..|++.+.++++.|.++
T Consensus 519 ~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~-~l~liaenG~~i~~~~-~~w~~~~~-~~~~w~~~v~~il~~~~~~ 595 (726)
T PRK14501 519 LRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEHGAWSRAPG-GEWQLLEP-VATEWKDAVRPILEEFVDR 595 (726)
T ss_pred HHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC-CeEEEEeCCEEEeCCC-CceEECCC-cchhHHHHHHHHHHHHHhc
Confidence 9999999999899999999999999999999876 4899999999999764 57876432 4678999999999999999
Q ss_pred CCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCcEEEeCCeEEEEEeCCCCcCC
Q 004314 696 TDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 696 t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~V~~G~~~vEV~p~gvnKG~ 760 (761)
++|+++|+|+++++|||+++|++++..+++++.++|+..+.+.++.+.+|+++|||+|+++|||.
T Consensus 596 ~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~ 660 (726)
T PRK14501 596 TPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGR 660 (726)
T ss_pred CCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHH
Confidence 99999999999999999999999999999999999999888888999999999999999999995
No 5
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.8e-127 Score=1103.56 Aligned_cols=658 Identities=51% Similarity=0.916 Sum_probs=624.4
Q ss_pred CCeEEEEEcCCccceeecCCCCCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCcchhhhhHHhhccCeeEEEeec
Q 004314 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFL 139 (761)
Q Consensus 60 ~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~~~~~~v~~~l~~~~~~~pv~l 139 (761)
..|+|+|||+||+.+++..+++.|.|+++.+|++.++++++. .++..||||++.++++++++.+.+.++..++|+||++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~ 80 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFL 80 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeeec
Confidence 469999999999999766667899999999999999988776 6899999999988999999999999999999999999
Q ss_pred Chhhhhhhhhcccccccccccccc-ccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHH
Q 004314 140 PPDILTKFYHGFCKQHLWPLFHYM-LPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFL 218 (761)
Q Consensus 140 ~~~~~~~~y~gf~~~~LWpl~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~l 218 (761)
+++....+|+||||++|||+|||+ .+..+.+. .|+.+.|++|+.+|+.||+++++.++ ++|+|||||||||++|+++
T Consensus 81 ~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 81 DDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchhh
Confidence 999999999999999999999999 56666554 78899999999999999999999999 5799999999999999999
Q ss_pred HHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeE
Q 004314 219 RRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRT 298 (761)
Q Consensus 219 r~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~ 298 (761)
|++.++++||||+|+|||++|+|+|+|.|++||++|+++|+|||||++|+|||++||.|+++++..++.+..++.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999888888889999999
Q ss_pred EEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEe
Q 004314 299 VGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIA 378 (761)
Q Consensus 299 ~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~ 378 (761)
+.|.++|+|||+.+|......+.+..+..+++..++|+++|++|||+|+.||+.+++.||+++|++||+|+++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecC
Q 004314 379 NPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQG 458 (761)
Q Consensus 379 ~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~ 458 (761)
.|+++++++|++++.++..++++||++||+..++||+++...++..++.++|.+||||++++++|||||+++||++|++
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~- 397 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQE- 397 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCCCceEEEcCCCCCcccc-cCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHH
Q 004314 459 VSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWA 537 (761)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa 537 (761)
++.+++|+|||+|+++++ ++++++||||.+++|.+|..+|+|+++|+..|+.++++++..|++.+|+
T Consensus 398 ------------~~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~ 465 (732)
T KOG1050|consen 398 ------------NKKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWA 465 (732)
T ss_pred ------------ccCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHH
Confidence 356899999999999999 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccccccCcccceeeeecCcccccCCHHHHHHHHHhccceeEEecCCCcCCCCCCCCCCCCHHHH
Q 004314 538 RSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVI 617 (761)
Q Consensus 538 ~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~ 617 (761)
.+|++.+ ++||+.|+ +.+++..+ |+.+.+++.|+++++|+|++|||||+++..++. ++
T Consensus 466 ~~~~~~l---------~~~~~~~~-~~~~~~~~------l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~------~~ 523 (732)
T KOG1050|consen 466 KSFLQGL---------KRIWKVGF-LGFRVTPL------LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK------AI 523 (732)
T ss_pred HHHHHhh---------hhhhhhcc-cccccccc------cChhHhhhhhhhccceEEEecccccccCCCCch------HH
Confidence 9999933 45778888 88887665 788999999999999999999999999865433 99
Q ss_pred HHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecCCcceeecCcCcCcchHHHHHHHHHHHhcCCC
Q 004314 618 SIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTD 697 (761)
Q Consensus 618 ~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~~~w~~~~~~~~~~w~~~v~~im~~y~~~t~ 697 (761)
..|+.||+||+|+|+|+|||++..|++|+..++++|++||||+++|++++ |++.. .+.+|++.++++|++|+++||
T Consensus 524 ~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~ert~ 599 (732)
T KOG1050|consen 524 SILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYTERTP 599 (732)
T ss_pred HHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999965 99865 689999999999999999999
Q ss_pred ccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCcEEEeCCeEEEEEeCCCCcCCC
Q 004314 698 GSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQVYIQLRI 761 (761)
Q Consensus 698 Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~V~~G~~~vEV~p~gvnKG~~ 761 (761)
|||+|.|+++++|||++|||++|.+||+||.++|+. .+.++.|++|++.|||+|+|++||.+
T Consensus 600 GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~~ 661 (732)
T KOG1050|consen 600 GSYIERKETALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGLA 661 (732)
T ss_pred CceecccCceEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHHH
Confidence 999999999999999999999999999999999998 78899999999999999999999853
No 6
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=2e-120 Score=1008.79 Aligned_cols=455 Identities=27% Similarity=0.532 Sum_probs=418.9
Q ss_pred CeEEEEEcCCccceeecCCCCCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCcchhhhhHHhhccCeeEEEeecC
Q 004314 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFLP 140 (761)
Q Consensus 61 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~~~~~~v~~~l~~~~~~~pv~l~ 140 (761)
+|+||||||+|+... + +.+.|||+++|.+.+. ..+++||||+|...++ .+.+......+|+|.||+|+
T Consensus 2 ~rLivVSNRlp~~~~-------~--~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~--~~~~~~~~~~~~~~~~v~L~ 69 (474)
T PRK10117 2 SRLVVVSNRIAPPDE-------H--KASAGGLAVGILGALK-AAGGLWFGWSGETGNE--DQPLKKVKKGNITWASFNLS 69 (474)
T ss_pred CCEEEEECCCcCCCC-------C--CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCC--cccchhhhcCCceEEEecCC
Confidence 689999999996321 1 3456899999988765 4799999999964322 22243333467999999999
Q ss_pred hhhhhhhhhccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHH
Q 004314 141 PDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRR 220 (761)
Q Consensus 141 ~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~ 220 (761)
++++++||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++| +|+|||||||||+||++||+
T Consensus 70 ~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-~D~VWVHDYhL~llp~~LR~ 143 (474)
T PRK10117 70 EQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKD-DDIIWIHDYHLLPFASELRK 143 (474)
T ss_pred HHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeccHhhHHHHHHHH
Confidence 99999999999999999999999875 5799999999999999999999999997 59999999999999999999
Q ss_pred hcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEE
Q 004314 221 RFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300 (761)
Q Consensus 221 ~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~ 300 (761)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++.... ..+.++||.++
T Consensus 144 ~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v~ 220 (474)
T PRK10117 144 RGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAFR 220 (474)
T ss_pred hCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEEE
Confidence 999999999999999999999999999999999999999999999999999999999999875322 24678899999
Q ss_pred EEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecC
Q 004314 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANP 380 (761)
Q Consensus 301 i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 380 (761)
|.++|+|||++.|...+..+ ...++++++++++++++|+||||+||+|||.++|+||++||++||+|+||++|+||+.|
T Consensus 221 v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p 299 (474)
T PRK10117 221 TEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 299 (474)
T ss_pred EEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC
Confidence 99999999999999877655 46678889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCC
Q 004314 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVS 460 (761)
Q Consensus 381 ~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~ 460 (761)
+|+++++|++++++++++|++||++||+.+|.||+|+.+.++++++.|+|++||||+|||+|||||||++||+|||.+
T Consensus 300 sR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~-- 377 (474)
T PRK10117 300 SRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 377 (474)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999862
Q ss_pred CCCCCCCCCCCCCceEEEcCCCCCcccccCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHH
Q 004314 461 GSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540 (761)
Q Consensus 461 ~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~ 540 (761)
+++|+||+|||+||+++|++|++|||||++++|+||++||+||.+||+.|+++++++|.+||+.+|+++|
T Consensus 378 ----------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~f 447 (474)
T PRK10117 378 ----------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECF 447 (474)
T ss_pred ----------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHH
Confidence 3578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 004314 541 FQDMERTCK 549 (761)
Q Consensus 541 l~~l~~~~~ 549 (761)
|.+|.++..
T Consensus 448 L~~L~~~~~ 456 (474)
T PRK10117 448 ISDLKQIVP 456 (474)
T ss_pred HHHHHHhhh
Confidence 999998653
No 7
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=7.8e-119 Score=1006.85 Aligned_cols=462 Identities=27% Similarity=0.474 Sum_probs=426.8
Q ss_pred EEcCCccceeecCCC-CCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCc-chh-hhhHHhhccCeeEEEeecChh
Q 004314 66 VANQLPVKAKRRPDN-KGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDL-SEQ-DDVSQLLLDRFKCVPAFLPPD 142 (761)
Q Consensus 66 vsnrlP~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~-~~~-~~v~~~l~~~~~~~pv~l~~~ 142 (761)
||||||+.+++++++ ..|.+++++|||+++|.+.+.+..+++||||+|.+.++ ++. ..+......+|+|.||||+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 799999999987643 35888999999999999877656789999999975321 111 112222245799999999999
Q ss_pred hhhhhhhccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhc
Q 004314 143 ILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRF 222 (761)
Q Consensus 143 ~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~ 222 (761)
+++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++| +|+|||||||||+||++||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAE-GATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999998654 5799999999999999999999999987 5999999999999999999999
Q ss_pred CCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCc--------------
Q 004314 223 TRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRG-------------- 288 (761)
Q Consensus 223 ~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g-------------- 288 (761)
|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|++|+++....+
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999987654321
Q ss_pred ---eeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhC
Q 004314 289 ---YIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQH 365 (761)
Q Consensus 289 ---~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~ 365 (761)
.+++.++||+++|+++|+|||++.|.+....+++.++++++|++++++++|++|||||++|||.++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 23588999999999999999999999888888888889999999999999999999999999999999999999999
Q ss_pred CCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCC
Q 004314 366 PKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGM 445 (761)
Q Consensus 366 P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGm 445 (761)
|+++||++|||||.|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.+||++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccccCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHh
Q 004314 446 NLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHY 525 (761)
Q Consensus 446 nLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 525 (761)
|||++|||||+.+ ++||||+|||+||+++|.+|++|||||++++|+||.+||+||.+||+.||++++
T Consensus 395 NLVa~Eyva~~~~-------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~ 461 (487)
T TIGR02398 395 NLVAKEYVAAQGL-------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMF 461 (487)
T ss_pred CcchhhHHhhhcC-------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 9999999999973 478999999999999999999999999999999999999999999999999999
Q ss_pred hHHhhCCHHHHHHHHHHHHHH
Q 004314 526 RYVSTHDVAYWARSFFQDMER 546 (761)
Q Consensus 526 ~~v~~~~~~~Wa~~~l~~l~~ 546 (761)
++|.+||+.+|+++||.+|..
T Consensus 462 ~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 462 DAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHhhCCHHHHHHHHHHHhhh
Confidence 999999999999999999874
No 8
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=2.5e-119 Score=1013.25 Aligned_cols=467 Identities=46% Similarity=0.866 Sum_probs=358.7
Q ss_pred eEEEEEcCCccceeecCCCCC--eEEeecCCchhHhhhccCCCCCceEEEEccCCCCCcch--hhhhHHhhccCeeEEEe
Q 004314 62 RVIIVANQLPVKAKRRPDNKG--WSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSE--QDDVSQLLLDRFKCVPA 137 (761)
Q Consensus 62 r~iivsnrlP~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~~~--~~~v~~~l~~~~~~~pv 137 (761)
|+||||||||+.++++++.|. |+++.+.|||+.+|.+.+. ..+++||||+|.+.+..+ ++.+.+.+.++|+|+||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~~-~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV 80 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLLK-KRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPV 80 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHHH-HH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHHHHh-cCCCEEEEeCCCcCccccccccchhhhcccCceEEEE
Confidence 799999999999999874455 8888888999999876443 589999999998766544 66677778899999999
Q ss_pred ecChhhhhhhhhccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHH
Q 004314 138 FLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTF 217 (761)
Q Consensus 138 ~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~ 217 (761)
||+++++++||+||||++|||+|||.++-.|+ ...|+.+.|++|++||++||++|++.+++ +|+|||||||||+||++
T Consensus 81 ~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~-~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~~ 158 (474)
T PF00982_consen 81 FLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPD-LARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQM 158 (474)
T ss_dssp EE-HHHHHHHTTTHHHHTHHHHHTT-GG-----G----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHHH
T ss_pred EcCHHHHHHHHHhhhhhccCcccccccccccc-cchhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHHH
Confidence 99999999999999999999999998762222 26899999999999999999999999996 59999999999999999
Q ss_pred HHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCe
Q 004314 218 LRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGR 297 (761)
Q Consensus 218 lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr 297 (761)
||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++...+| ++.|+||
T Consensus 159 LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~Gr 236 (474)
T PF00982_consen 159 LRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNGR 236 (474)
T ss_dssp HHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETTE
T ss_pred HHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999887765 6899999
Q ss_pred EEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCC-CeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEE
Q 004314 298 TVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEG-KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ 376 (761)
Q Consensus 298 ~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 376 (761)
.++|.++|+|||++.|...+.++++.+++++|++++++ +++|+||||+|++|||.+||+||++||++||+++|||+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999998889999999999999988 59999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeee
Q 004314 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (761)
Q Consensus 377 i~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~ 456 (761)
|+.|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.|||++||||++||+|||||||++||++||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHH
Q 004314 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAY 535 (761)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 535 (761)
++ ++|+||+|||+||+++|. +|++|||||++++|+||.+||+||++||+.|+++++++|.+||+.+
T Consensus 397 ~~-------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~ 463 (474)
T PF00982_consen 397 DD-------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQW 463 (474)
T ss_dssp -T-------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHH
T ss_pred cC-------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHH
Confidence 74 478999999999999997 6799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 004314 536 WARSFFQDMER 546 (761)
Q Consensus 536 Wa~~~l~~l~~ 546 (761)
|+++||++|++
T Consensus 464 W~~~~l~~L~~ 474 (474)
T PF00982_consen 464 WAESFLRDLKR 474 (474)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhhC
Confidence 99999999974
No 9
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.5e-113 Score=943.51 Aligned_cols=466 Identities=38% Similarity=0.695 Sum_probs=430.7
Q ss_pred CCCCCeEEEEEcCCccceeecCCCCCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCcchhhhhHHhhccCeeEEE
Q 004314 57 SVAQDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVP 136 (761)
Q Consensus 57 ~~~~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~~~~~~v~~~l~~~~~~~p 136 (761)
.....|+|+||||+|+...+..+++...+..+.|||+.+|++.+ ...+++|+||+|...++.+.....+....++...|
T Consensus 11 ~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~-~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (486)
T COG0380 11 PLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLL-RVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAP 89 (486)
T ss_pred cccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhh-HhhcceEEecCceeccccccchhhhhccccceEEE
Confidence 45678999999999999876666667888899999999997754 46899999999976543332223333455899999
Q ss_pred eecChhhhhhhhhccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHH
Q 004314 137 AFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPT 216 (761)
Q Consensus 137 v~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~ 216 (761)
|+++.+++++||+||||++|||+|||+.+. ..|++++|.+|++||++||++|++++++ +|+||||||||+|+|+
T Consensus 90 v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~-gDiIWVhDYhL~L~P~ 163 (486)
T COG0380 90 VILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEP-GDIIWVHDYHLLLVPQ 163 (486)
T ss_pred EecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEechhhhhHH
Confidence 999999999999999999999999999875 5799999999999999999999999997 5999999999999999
Q ss_pred HHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEE---
Q 004314 217 FLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLE--- 293 (761)
Q Consensus 217 ~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~--- 293 (761)
|||++.|+++||||||+|||++|+|+|||+|++||+|||+||+|||||++|++||++||+|+++.... ..+.
T Consensus 164 mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~-----~~~~~~~ 238 (486)
T COG0380 164 MLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGD-----ADIRFNG 238 (486)
T ss_pred HHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccccc-----ccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999986411 1233
Q ss_pred EcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCC-CeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCce
Q 004314 294 YYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEG-KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRA 372 (761)
Q Consensus 294 ~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~v 372 (761)
++|+.+++..+|+|||+..|......+.+..+..++++.+.+ +++|+||||+||+||+..+++||++||++||+|+|||
T Consensus 239 ~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kv 318 (486)
T COG0380 239 ADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKV 318 (486)
T ss_pred cCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCce
Confidence 447999999999999999999988888888889999999876 9999999999999999999999999999999999999
Q ss_pred eEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhh
Q 004314 373 VLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEY 452 (761)
Q Consensus 373 vLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea 452 (761)
+|+||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|+++.++++++.+||++|||+++||+|||||||++||
T Consensus 319 vliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEy 398 (486)
T COG0380 319 VLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEY 398 (486)
T ss_pred EEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccccCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCC
Q 004314 453 IVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHD 532 (761)
Q Consensus 453 ma~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 532 (761)
+||+.+ ++|+||+|||+||+.+|.+|++|||||.+++|+||++||+|+++||+.|++++++.|.+||
T Consensus 399 Va~q~~-------------~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d 465 (486)
T COG0380 399 VAAQRD-------------KPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHD 465 (486)
T ss_pred HHhhcC-------------CCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhh
Confidence 999873 5789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 004314 533 VAYWARSFFQDMERT 547 (761)
Q Consensus 533 ~~~Wa~~~l~~l~~~ 547 (761)
+++|+++|+.+|.+.
T Consensus 466 ~~~W~~~fl~~la~~ 480 (486)
T COG0380 466 VARWANSFLDDLAQA 480 (486)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999873
No 10
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=1.9e-107 Score=919.84 Aligned_cols=454 Identities=38% Similarity=0.708 Sum_probs=421.5
Q ss_pred eEEEEEcCCccceeecCCCCCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCc-chhhhhHHhhccCeeEEEeecC
Q 004314 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDL-SEQDDVSQLLLDRFKCVPAFLP 140 (761)
Q Consensus 62 r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~-~~~~~v~~~l~~~~~~~pv~l~ 140 (761)
|+||||||+|+.+.++ + ++++.|||+++|.+.+. ..+++||||+|...++ +++..+...+..+|+|+||||+
T Consensus 1 ~livvsnr~p~~~~~~---~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 73 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG---G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLS 73 (456)
T ss_pred CEEEEECCCCccccCC---C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECC
Confidence 6999999999988754 2 56678999999988665 5799999999976553 3334455556788999999999
Q ss_pred hhhhhhhhhccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHH
Q 004314 141 PDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRR 220 (761)
Q Consensus 141 ~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~ 220 (761)
+++++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.+++ +|+|||||||||++|.+||+
T Consensus 74 ~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 74 EEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHHHh
Confidence 99999999999999999999998654 5799999999999999999999999987 59999999999999999999
Q ss_pred hcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEE
Q 004314 221 RFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300 (761)
Q Consensus 221 ~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~ 300 (761)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++.... ++.+.|+.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~~ 223 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999876432 3678899999
Q ss_pred EEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecC
Q 004314 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANP 380 (761)
Q Consensus 301 i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 380 (761)
|.++|+|||++.|.+....+++.+..+++|++++++++|++|||+|+.||+..+|+||++|++++|+++++++|+||+.|
T Consensus 224 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p 303 (456)
T TIGR02400 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVP 303 (456)
T ss_pred EEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecC
Confidence 99999999999999887777777778889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCC
Q 004314 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVS 460 (761)
Q Consensus 381 ~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~ 460 (761)
+|+++++|+++++++++++++||++||+.+|.||+++.+.++++++.++|++|||||+||++||||||++||||||.+
T Consensus 304 ~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P-- 381 (456)
T TIGR02400 304 SRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDP-- 381 (456)
T ss_pred CccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999973
Q ss_pred CCCCCCCCCCCCCceEEEcCCCCCcccccCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHH
Q 004314 461 GSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540 (761)
Q Consensus 461 ~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~ 540 (761)
+.|+||+|+++|+++.+.+|++|||+|++++|+||.++|+||.+||+.|+++++++|.+||+.+|+++|
T Consensus 382 -----------~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~ 450 (456)
T TIGR02400 382 -----------KDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDF 450 (456)
T ss_pred -----------CCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 347899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 004314 541 FQDME 545 (761)
Q Consensus 541 l~~l~ 545 (761)
+.+|.
T Consensus 451 l~~l~ 455 (456)
T TIGR02400 451 LSDLN 455 (456)
T ss_pred HHHhh
Confidence 99885
No 11
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=9.8e-98 Score=846.09 Aligned_cols=459 Identities=44% Similarity=0.800 Sum_probs=425.5
Q ss_pred eEEEEEcCCccceeecCCCCCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCcchhhhhHHhhccCeeEEEeecCh
Q 004314 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFLPP 141 (761)
Q Consensus 62 r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~~~~~~v~~~l~~~~~~~pv~l~~ 141 (761)
|+||||||+|+.++++++ |.|.++++.|||+.+|.+.+. ..+++||||++.+.+.+++..+.+.+.++|+|+|||+++
T Consensus 1 ~li~vsnr~p~~~~~~~~-~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 78 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD-GEFEARRSAGGLATALKGLLK-RTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSP 78 (460)
T ss_pred CEEEEECCCCceeEEcCC-CceEeccCCCcHHHHHHHHHh-cCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCH
Confidence 689999999999998764 689999999999999987554 579999999998776544444556678899999999999
Q ss_pred hhhhhhhhccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHh
Q 004314 142 DILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRR 221 (761)
Q Consensus 142 ~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~ 221 (761)
++++.||+||||++|||+|||+.+. .+|++++|++|+++|++||++|++.+++ +|+||||||||+++|.+||++
T Consensus 79 ~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 79 EEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHhh
Confidence 9999999999999999999999876 5799999999999999999999999996 599999999999999999999
Q ss_pred cCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEE
Q 004314 222 FTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGI 301 (761)
Q Consensus 222 ~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i 301 (761)
.++++||||+|||||++|+|+++|+|++|+++|++||+|||||++|++||+++|+++++++.... ..+.++|+.++|
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~---~~i~~~g~~~~i 229 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDD---GGVEYGGRRVRV 229 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCC---ceEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999876542 357899999999
Q ss_pred EEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCC
Q 004314 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPA 381 (761)
Q Consensus 302 ~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~ 381 (761)
.++|+|||++.|.+....++..++.++++..++++++|++|||+++.||+..+|+||++|++++|+++++++|+|||.|+
T Consensus 230 ~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~ 309 (460)
T cd03788 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPS 309 (460)
T ss_pred EEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCC
Confidence 99999999999987766556555566677777889999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCC
Q 004314 382 RGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSG 461 (761)
Q Consensus 382 r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~ 461 (761)
|+++++++++++++++++++||.+||..+|.||+++.+.++.+++.++|++|||||+||.+||||||++||||||.+
T Consensus 310 ~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p--- 386 (460)
T cd03788 310 RTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDD--- 386 (460)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecC---
Confidence 99999999999999999999999999888999999999999999999999999999999999999999999999973
Q ss_pred CCCCCCCCCCCCceEEEcCCCCCcccccCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHH
Q 004314 462 SESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541 (761)
Q Consensus 462 ~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l 541 (761)
++|+||+|+++|+++.+.+|++|||+|++++|++|.++|+|+++|++.|+++++++|.++|+..|+++|+
T Consensus 387 ----------~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l 456 (460)
T cd03788 387 ----------DPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFL 456 (460)
T ss_pred ----------CCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4789999999999998888999999999999999999999999999999999999999999999999999
Q ss_pred HHH
Q 004314 542 QDM 544 (761)
Q Consensus 542 ~~l 544 (761)
.+|
T Consensus 457 ~~l 459 (460)
T cd03788 457 DDL 459 (460)
T ss_pred Hhh
Confidence 987
No 12
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=1.5e-30 Score=310.00 Aligned_cols=508 Identities=14% Similarity=0.127 Sum_probs=309.4
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHh-----------------cCcchHHHH-HHhhhcCEEeee
Q 004314 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYR-----------------TLPVREEIL-KALLNADLIGFH 263 (761)
Q Consensus 202 DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr-----------------~lp~r~~il-~~ll~~DligF~ 263 (761)
|+||-|+++-..+...|++++ ++|.+++.|+. ..+-++ .++.|-++- ..+-.||.|.-.
T Consensus 312 DvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIas 388 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITS 388 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEe
Confidence 899999998888888888875 68999999973 111111 012222211 236689999999
Q ss_pred CHHHHHHHHHHH-------hhhcCceeeccCceeEEEEcCe-EEEEEEeccccCcccchhhhccchH-------------
Q 004314 264 TFDYARHFLSCC-------SRMLGLEYQSKRGYIGLEYYGR-TVGIKIMPVGIHMGQIESVLRLADK------------- 322 (761)
Q Consensus 264 t~~~~~~Fl~~~-------~r~lg~~~~~~~g~~~~~~~gr-~~~i~v~P~GId~~~f~~~~~~~~~------------- 322 (761)
|......-...- .|.|.. ..++| +.++|+ ..++.|+|+|||+++|.+.....+.
T Consensus 389 T~qE~~eq~~lY~~~~~~~~~~~~~--~~~~g---v~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~ 463 (1050)
T TIGR02468 389 TRQEIEEQWGLYDGFDVILERKLRA--RARRG---VSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPD 463 (1050)
T ss_pred CHHHHHHHHHHhccCCchhhhhhhh--hhccc---ccccccCCCCeEEeCCCCcHHHccCCCccccchhccccccccccc
Confidence 987776432210 011100 01121 333332 2388999999999999874211110
Q ss_pred HHHHHHHHHHc--CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchh----HHHHHHHHH
Q 004314 323 DWRVQELKQQF--EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKD----LEEIQAEIH 396 (761)
Q Consensus 323 ~~~~~~lr~~~--~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~----~~~l~~ev~ 396 (761)
.....+++..+ +++++|++|+|+++.||+..+|+||.++.+..+.. ++++ ++|... .... ..+...++.
T Consensus 464 ~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 464 PPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred chhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHH
Confidence 00122344434 67889999999999999999999999986543321 2333 345311 1111 112345566
Q ss_pred HHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhc----ccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCC
Q 004314 397 ATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIA----ECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPK 472 (761)
Q Consensus 397 ~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~A----Dv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~ 472 (761)
+++++.+.. ..|.| .++++.++++++|+.| ||||+||.+|||||+++||||||.
T Consensus 539 ~li~~lgL~------g~V~F-lG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGl--------------- 596 (1050)
T TIGR02468 539 KLIDKYDLY------GQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL--------------- 596 (1050)
T ss_pred HHHHHhCCC------CeEEe-cCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCC---------------
Confidence 666665421 23554 5689999999999998 699999999999999999999986
Q ss_pred CceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHHHH
Q 004314 473 KSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCK 549 (761)
Q Consensus 473 ~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~~~ 549 (761)
|+|+|..+|+.+.+. +|++|+|.|++++|++|.++|+.+ +.++...++.++.+.++++..-++.+++.+.....
T Consensus 597 --PVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dp-elr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~ 673 (1050)
T TIGR02468 597 --PMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADK-QLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRP 673 (1050)
T ss_pred --CEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhc
Confidence 999999999988873 599999999999999999999864 34555666678889999999999999988887654
Q ss_pred hhcc-cccc-----c-----cC--------cccceeeeec----Cc--cc-ccCC----HHHHHHHHH------------
Q 004314 550 DHFK-RRCW-----G-----IG--------LSFGFRVVAL----DP--NF-RKLS----IDAIVSAYL------------ 587 (761)
Q Consensus 550 ~~~~-~~~~-----~-----~g--------~g~~~~~~~~----~~--~f-~~l~----~~~i~~~y~------------ 587 (761)
.+.. ++.. . .+ ++|++.+-.- +. |. -.++ ...|.++.+
T Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (1050)
T TIGR02468 674 RHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAK 753 (1050)
T ss_pred cCcccccccccccccccccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhccccccccccc
Confidence 4311 0000 0 01 1111111000 00 00 0000 011111111
Q ss_pred -------------hccceeEE--ecCCCcCCCCCCCCCCCCHHHHHHHHHHHhc---CCCeEEEEcCCChhhHHhhccC-
Q 004314 588 -------------RSKSRAIL--FDYDGTVMPQTSINKAPSQAVISIINTLCND---ARNTVFVVSGRGRDCLGKWFSP- 648 (761)
Q Consensus 588 -------------~s~~rlI~--lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d---~~n~V~IvSGR~~~~L~~~f~~- 648 (761)
...+++|+ +|.|+| .. ..+-+.++++.+.++ ....++++|||+.+.+.+.+..
T Consensus 754 ~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~-------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~ 825 (1050)
T TIGR02468 754 AQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD-------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSG 825 (1050)
T ss_pred cccccccccCccccccceEEEEEeccCCC-CC-------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhC
Confidence 11245666 999999 32 223444555555432 2366799999999999998853
Q ss_pred -CC--C-ceEEccCCeEEeecC-----Ccceee---cCcCcCcchH-HHHHHHHHHHhcCC--------CccEEEecC--
Q 004314 649 -CK--K-LGIAAEHGYFMRWSA-----DEEWQN---CGQSVDFGWI-QIAEPVMKLYTEST--------DGSYIEIKE-- 705 (761)
Q Consensus 649 -~~--~-l~liaehGa~ir~~~-----~~~w~~---~~~~~~~~w~-~~v~~im~~y~~~t--------~Gs~iE~k~-- 705 (761)
+| . -.+||.-|++|+++. +..|.. .....+..|. +.+++.+..+.... ++-..+..+
T Consensus 826 ~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q 905 (1050)
T TIGR02468 826 GLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESS 905 (1050)
T ss_pred CCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhC
Confidence 33 2 237999999999862 122321 0113456784 55666665544311 333444333
Q ss_pred --ceEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCcEE-Ee-CCeEEEEEeCCCCcCC
Q 004314 706 --SALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAV-KS-GQFIVEVKPQVYIQLR 760 (761)
Q Consensus 706 --~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~V-~~-G~~~vEV~p~gvnKG~ 760 (761)
++++|...+. +. ....+++.+.|+.. +....+ .+ +...++|.|..+|||.
T Consensus 906 ~~~k~SY~v~d~--~~-~~~v~elr~~Lr~~--gLr~~~iys~~~~~LDVlP~~ASKgq 959 (1050)
T TIGR02468 906 TDHCYAFKVKDP--SK-VPPVKELRKLLRIQ--GLRCHAVYCRNGTRLNVIPLLASRSQ 959 (1050)
T ss_pred CCceEEEEecCc--cc-CccHHHHHHHHHhC--CCceEEEeecCCcEeeeeeCCCCHHH
Confidence 4455543332 21 11245556555532 223333 33 5589999999999983
No 13
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3.4e-31 Score=275.28 Aligned_cols=180 Identities=29% Similarity=0.498 Sum_probs=157.0
Q ss_pred CHHHHHHHHHhccceeEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEE
Q 004314 578 SIDAIVSAYLRSKSRAILFDYDGTVMPQT--SINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIA 655 (761)
Q Consensus 578 ~~~~i~~~y~~s~~rlI~lDyDGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~li 655 (761)
....+.+.|..+++++|++||||||+++. +..+.|+++++++|++|+++++|.|+|+|||+.+.|++||+ +++++|+
T Consensus 5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~ 83 (266)
T COG1877 5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLI 83 (266)
T ss_pred hhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEE
Confidence 44567788999999999999999999977 46788999999999999999999999999999999999998 8999999
Q ss_pred ccCCeEEeecCCcceeecCcCcCcchHHHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHh
Q 004314 656 AEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVL 735 (761)
Q Consensus 656 aehGa~ir~~~~~~w~~~~~~~~~~w~~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l 735 (761)
||||+++|.+.+.-|....+..+..|++.+..++++|++++||+|+|.|++++.||||+++++.+..++...........
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~ 163 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINEL 163 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccc
Confidence 99999998887777787665667889999999999999999999999999999999999987766655554444333221
Q ss_pred cCCCcEEEeCCeEEEEEeCCCCcCCC
Q 004314 736 ANEPAAVKSGQFIVEVKPQVYIQLRI 761 (761)
Q Consensus 736 ~~~~v~V~~G~~~vEV~p~gvnKG~~ 761 (761)
.++|+.|+++|||+|.++|||.+
T Consensus 164 ---~~~v~~gk~vVEvrp~~~~KG~a 186 (266)
T COG1877 164 ---KLRVTPGKMVVELRPPGVSKGAA 186 (266)
T ss_pred ---cEEEEeCceEEEEeeCCcchHHH
Confidence 18999999999999999999963
No 14
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.96 E-value=5.1e-30 Score=266.80 Aligned_cols=165 Identities=34% Similarity=0.570 Sum_probs=124.2
Q ss_pred EecCCCcCCCCCC--CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecCCcceee
Q 004314 595 LFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQN 672 (761)
Q Consensus 595 ~lDyDGTL~~~~~--~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~~~w~~ 672 (761)
||||||||+|+.+ ..+.|+++++++|++||++++|.|+|+|||+.+.++.++ .+++++|+||||++++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~-~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFG-GIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH--S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhc-CCCCceEEEEeeEEeccCccccccc
Confidence 6999999999874 667899999999999999999999999999999966665 5789999999999999998777875
Q ss_pred cCcCcCcchHHHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcCC-CcEEEeCCeEEEE
Q 004314 673 CGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE-PAAVKSGQFIVEV 751 (761)
Q Consensus 673 ~~~~~~~~w~~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~-~v~V~~G~~~vEV 751 (761)
.....+..|++.+.++++.|.++++|++||+|+++++||||+++++++..|++++.+++.+.+... +++++.|+++|||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 444556789999999999999999999999999999999999999999999999999999877765 7999999999999
Q ss_pred EeCCCCcCC
Q 004314 752 KPQVYIQLR 760 (761)
Q Consensus 752 ~p~gvnKG~ 760 (761)
+|.+++||.
T Consensus 160 rp~~~~KG~ 168 (235)
T PF02358_consen 160 RPPGVNKGS 168 (235)
T ss_dssp E-TT--HHH
T ss_pred EeCCCChHH
Confidence 999999985
No 15
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.94 E-value=2.7e-25 Score=246.32 Aligned_cols=301 Identities=16% Similarity=0.147 Sum_probs=209.7
Q ss_pred hHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhh
Q 004314 176 RSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL 255 (761)
Q Consensus 176 ~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll 255 (761)
...+..|...++.++.++....+ .|+||+|+++.+.++...+. .++|++++.|+++.... + .....+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~--~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDLD--ADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--R--RVWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccCC--CCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--H--HHHHHHHHHHH
Confidence 45678888888888776433323 49999999998777666543 36788899999875321 0 01122333345
Q ss_pred hcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc--
Q 004314 256 NADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-- 333 (761)
Q Consensus 256 ~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-- 333 (761)
.+|.+.+.+.++++.+ +..+ .+ ++|+|||+........ .......+++++
T Consensus 135 ~~d~~i~~~~~~~~~~----------------------~~~~--~~-vipngvd~~~~~~~~~---~~~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPPQ----------------------VPPR--KV-IIPPSIDPLSGKNREL---SPADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCCC----------------------CCCc--eE-EeCCCCCCCccccCCC---CHHHHHHHHHHhCC
Confidence 6788777663322111 0112 23 8999999754211111 112234455556
Q ss_pred -CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004314 334 -EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412 (761)
Q Consensus 334 -~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~ 412 (761)
+++++|++|||+++.||+..+++|++.+.+++|+++ |+++|..... .++..++. +++.++.+. ..
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~---~~~~~~~~~------~~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVY---EEVLEYAEG------DP 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHH---HHHHHHhCC------CC
Confidence 478899999999999999999999999988888765 8888854321 12222322 233322221 12
Q ss_pred cEEEEcCC-CCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc--
Q 004314 413 PVVFIDKP-VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-- 489 (761)
Q Consensus 413 pV~~~~~~-v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-- 489 (761)
.|.+++.. ++.+++.++|++||+|++||.+||||++++||||||. |+|+|+.+|..+.+.
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~-----------------Pvv~s~~~~~~~~i~~~ 315 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGK-----------------PVIAGPVGGIPLQIEDG 315 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCC-----------------CEEEcCCCCchhhcccC
Confidence 47776543 4899999999999999999999999999999999976 999999999888773
Q ss_pred -CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHH-hhCCHHHHHHHHHHHHHH
Q 004314 490 -GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMER 546 (761)
Q Consensus 490 -~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~Wa~~~l~~l~~ 546 (761)
.|+++++ .+++|++|.++++++ ++++.+.++.++++ ..+++...++++++.+++
T Consensus 316 ~~g~~~~~--~~~~a~~i~~ll~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 316 ETGFLVDT--VEEAAVRILYLLRDP-ELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred CceEEeCC--cHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 3788874 678999999999864 46667777788887 478999999999887764
No 16
>PLN02151 trehalose-phosphatase
Probab=99.93 E-value=1.9e-25 Score=240.63 Aligned_cols=167 Identities=21% Similarity=0.306 Sum_probs=138.9
Q ss_pred HhccceeEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEee
Q 004314 587 LRSKSRAILFDYDGTVMPQT--SINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRW 664 (761)
Q Consensus 587 ~~s~~rlI~lDyDGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~ 664 (761)
.++++++|||||||||+|+. |..+.++++++++|++|++ +..|+|+|||+++.|.++++ +++++++|+||++++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 56678999999999999986 4567899999999999996 46899999999999999997 5679999999999997
Q ss_pred cC-Ccceee----cCcCcCcchHHHHHHHHHHH---hcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhc
Q 004314 665 SA-DEEWQN----CGQSVDFGWIQIAEPVMKLY---TESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLA 736 (761)
Q Consensus 665 ~~-~~~w~~----~~~~~~~~w~~~v~~im~~y---~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~ 736 (761)
++ +..|+. .....+..|...+.++++.+ +.++||++||+|+++++||||+++++ ++.++..++..++.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 63 345641 11123567888888877665 47899999999999999999999765 34567788888777
Q ss_pred CCC-cEEEeCCeEEEEEeC-CCCcCC
Q 004314 737 NEP-AAVKSGQFIVEVKPQ-VYIQLR 760 (761)
Q Consensus 737 ~~~-v~V~~G~~~vEV~p~-gvnKG~ 760 (761)
+.+ +.+..|++++||+|. ++|||+
T Consensus 247 ~~~~l~v~~GkkVvEvrP~~~~dKG~ 272 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPIIKWDKGK 272 (354)
T ss_pred hCCCcEEecCCEEEEEeCCCCCCHHH
Confidence 766 799999999999996 999995
No 17
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.93 E-value=2.7e-24 Score=245.79 Aligned_cols=293 Identities=20% Similarity=0.260 Sum_probs=199.9
Q ss_pred CCEEEEeCCccchHHHHHHHhc----CCCeEEEEEecC-----CCchhHHhcC--cch-------------HHHHHHhhh
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRF----TRLRMGFFLHSP-----FPSSEIYRTL--PVR-------------EEILKALLN 256 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~----~~~~ig~flH~P-----fP~~e~fr~l--p~r-------------~~il~~ll~ 256 (761)
-|+||.||+|..++|.++++++ .++++.++.|.. || .+.+..+ |.. .-+-.++..
T Consensus 119 pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (466)
T PRK00654 119 PDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFP-AEILGELGLPAEAFHLEGLEFYGQISFLKAGLYY 197 (466)
T ss_pred CceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCC-HHHHHHcCCChHHcCchhhhcCCcccHHHHHHHh
Confidence 3999999999999999998763 468999999986 22 1111111 110 112234567
Q ss_pred cCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEE--EEcCeEEEEEEeccccCcccchhhhcc-----------chHH
Q 004314 257 ADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGL--EYYGRTVGIKIMPVGIHMGQIESVLRL-----------ADKD 323 (761)
Q Consensus 257 ~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~--~~~gr~~~i~v~P~GId~~~f~~~~~~-----------~~~~ 323 (761)
||.|...+..+++.... ...|. ++ .+..+..++.++|+|||++.|.+.... ....
T Consensus 198 ad~vitvS~~~~~ei~~---~~~~~---------gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~ 265 (466)
T PRK00654 198 ADRVTTVSPTYAREITT---PEFGY---------GLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKA 265 (466)
T ss_pred cCcCeeeCHHHHHHhcc---ccCCc---------ChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchH
Confidence 77777777766655321 00000 00 011133478899999999988753210 0112
Q ss_pred HHHHHHHHHcC----CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHH
Q 004314 324 WRVQELKQQFE----GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATC 399 (761)
Q Consensus 324 ~~~~~lr~~~~----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv 399 (761)
+..+.+++++. +.++|++|||+++.||+..+++|+++++++ + +.|+++|. |+ ..+++++++++
T Consensus 266 ~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~-----g~--~~~~~~l~~l~ 332 (466)
T PRK00654 266 ENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGT-----GD--PELEEAFRALA 332 (466)
T ss_pred HHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEec-----Cc--HHHHHHHHHHH
Confidence 22345677762 568999999999999999999999998753 3 44887773 22 13456677777
Q ss_pred HHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEc
Q 004314 400 KRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS 479 (761)
Q Consensus 400 ~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~S 479 (761)
++.+. .++++.+. +.+....+|+.||++|+||.+||||++.+|||+||. |+|+|
T Consensus 333 ~~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~-----------------p~V~~ 386 (466)
T PRK00654 333 ARYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGT-----------------LPIVR 386 (466)
T ss_pred HHCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCC-----------------CEEEe
Confidence 65431 25555443 566678999999999999999999999999999976 88999
Q ss_pred CCCCCcccc-c--------CcEEECCCCHHHHHHHHHHHHcCC--HHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHH
Q 004314 480 EFIGCSPSL-S--------GAIRVNPWNIEATAEAMHEAIQMN--EAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERT 547 (761)
Q Consensus 480 e~~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~ 547 (761)
+.+|+.+.+ + +|++|+|.|+++++++|.++++.. ++.++.+.++.. ...+++..-++++++-.+++
T Consensus 387 ~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 387 RTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 999999987 2 389999999999999999998732 222333222222 25678888888887766554
No 18
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.93 E-value=9.1e-24 Score=235.24 Aligned_cols=269 Identities=20% Similarity=0.263 Sum_probs=202.0
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcC
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLG 280 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg 280 (761)
.|+|++|+.. .+...++++.|++++.+.+|..|.. +. + -.++.|.+.+.... .++. +..
T Consensus 100 ~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~-~~----------~---~~~~~ii~~S~~~~-~~~~---~~~- 158 (380)
T PRK15484 100 DSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFEP-EL----------L---DKNAKIIVPSQFLK-KFYE---ERL- 158 (380)
T ss_pred CcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccCh-hH----------h---ccCCEEEEcCHHHH-HHHH---hhC-
Confidence 5999999843 4446678889999999999987631 11 1 23577777665433 3332 111
Q ss_pred ceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccCChHHHHHH
Q 004314 281 LEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGVDLKLLA 357 (761)
Q Consensus 281 ~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~A 357 (761)
...++.++|+|||.+.|.+.. ...+++++ +++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 112467899999998886421 12233444 367899999999999999999999
Q ss_pred HHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccce
Q 004314 358 MEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVV 437 (761)
Q Consensus 358 ~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 437 (761)
+.++.+++|+++ |+++|.+......+..++++++.+++.+++. .|++ .+.++.+++..+|+.||++|
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~~-~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCIM-LGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEEE-eCCCCHHHHHHHHHhCCEEE
Confidence 999999999876 8888865432222334567777777766541 3655 46789999999999999999
Q ss_pred eccc-ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcE-EECCCCHHHHHHHHHHHHcC
Q 004314 438 VTAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAI-RVNPWNIEATAEAMHEAIQM 512 (761)
Q Consensus 438 vtS~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al-~VnP~d~~~~A~ai~~aL~m 512 (761)
+||. .||||++++||||||. |+|+|..+|+.+.+. .|+ +++|.|++++|++|.+++++
T Consensus 282 ~pS~~~E~f~~~~lEAma~G~-----------------PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d 344 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAAGK-----------------PVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLAD 344 (380)
T ss_pred eCCCCccccccHHHHHHHcCC-----------------CEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcC
Confidence 9997 5999999999999976 999999999888773 365 67899999999999999997
Q ss_pred CHHHHHHHHHHHhhHH-hhCCHHHHHHHHHHHHHH
Q 004314 513 NEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMER 546 (761)
Q Consensus 513 ~~~er~~r~~~~~~~v-~~~~~~~Wa~~~l~~l~~ 546 (761)
++ ++.+.++.++++ .++++..-++++++.++.
T Consensus 345 ~~--~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 345 PE--LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred HH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 64 345666777665 678999999999888865
No 19
>PLN02939 transferase, transferring glycosyl groups
Probab=99.93 E-value=9.5e-24 Score=248.63 Aligned_cols=298 Identities=14% Similarity=0.136 Sum_probs=208.0
Q ss_pred CEEEEeCCccchHHHHHHHh-----cCCCeEEEEEecC-----CCchhHH-hcCcch---------------HHHH-HHh
Q 004314 202 DYVWIHDYHLMVLPTFLRRR-----FTRLRMGFFLHSP-----FPSSEIY-RTLPVR---------------EEIL-KAL 254 (761)
Q Consensus 202 DiVwvhDyhl~llp~~lr~~-----~~~~~ig~flH~P-----fP~~e~f-r~lp~r---------------~~il-~~l 254 (761)
||||+||+|..++|.++.+. +.++++.|++|.- ||...+- ..+|+. -.++ -++
T Consensus 612 DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~GI 691 (977)
T PLN02939 612 DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAI 691 (977)
T ss_pred CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHHHH
Confidence 89999999999985544432 3567899999965 3322221 112211 1123 357
Q ss_pred hhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhcc-----------chHH
Q 004314 255 LNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRL-----------ADKD 323 (761)
Q Consensus 255 l~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~-----------~~~~ 323 (761)
..||.|..-++.|++.-++ ..--|++. .+..+..++.++|+|||++.|.+.... ....
T Consensus 692 v~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~ 760 (977)
T PLN02939 692 VYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKA 760 (977)
T ss_pred HhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEecceehhhcCCccccccccccChhhhhhhh
Confidence 7899999999999988654 11111110 122345678899999999998764210 0011
Q ss_pred HHHHHHHHHcC------CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHH
Q 004314 324 WRVQELKQQFE------GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHA 397 (761)
Q Consensus 324 ~~~~~lr~~~~------~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~ 397 (761)
.....++++++ +.++|++|||+++.||+..+++|+.++++ ++ +.||++|. |++ ..+++++.+
T Consensus 761 ~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vqLVIvGd-----Gp~-~~~e~eL~~ 828 (977)
T PLN02939 761 ANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQFVLLGS-----SPV-PHIQREFEG 828 (977)
T ss_pred hhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CEEEEEeC-----CCc-HHHHHHHHH
Confidence 22345777772 35899999999999999999999998875 33 34887773 332 245566777
Q ss_pred HHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEE
Q 004314 398 TCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLV 477 (761)
Q Consensus 398 lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV 477 (761)
++.+++.. ..|.|+ +.++......+|+.||+||+||.+|||||+++|||+||. |+|
T Consensus 829 La~~l~l~------drV~Fl-G~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGt-----------------PPV 884 (977)
T PLN02939 829 IADQFQSN------NNIRLI-LKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGS-----------------VPI 884 (977)
T ss_pred HHHHcCCC------CeEEEE-eccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCC-----------------CEE
Confidence 77765421 246665 467777788999999999999999999999999999975 888
Q ss_pred EcCCCCCccccc------------CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHhhHHhhCCHHHHHHHHHH
Q 004314 478 VSEFIGCSPSLS------------GAIRVNPWNIEATAEAMHEAIQ---MNEAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (761)
Q Consensus 478 ~Se~~G~~~~l~------------~al~VnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~ 542 (761)
++..+|+.+.+. +|++++|.|+++++++|.+++. ..++.++.+.++. ....+++...++.+++
T Consensus 885 Vs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe~~A~qYee 962 (977)
T PLN02939 885 VRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKD--MNIDFSWDSSASQYEE 962 (977)
T ss_pred EecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH--HHhcCCHHHHHHHHHH
Confidence 999999987662 4899999999999999999986 2333333333322 2367899999999887
Q ss_pred HHHHHH
Q 004314 543 DMERTC 548 (761)
Q Consensus 543 ~l~~~~ 548 (761)
-..++.
T Consensus 963 LY~~ll 968 (977)
T PLN02939 963 LYQRAV 968 (977)
T ss_pred HHHHHH
Confidence 666554
No 20
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.93 E-value=3.5e-25 Score=231.77 Aligned_cols=166 Identities=30% Similarity=0.411 Sum_probs=140.9
Q ss_pred ccceeEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecC
Q 004314 589 SKSRAILFDYDGTVMPQT--SINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSA 666 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~ 666 (761)
+++++|+|||||||++.. |....|++++++.|++|++++++.|+|+|||+...+.+.+. +++++++|+||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~-~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVK-LPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCC-CCceeEEeecCEEEecCC
Confidence 578999999999999965 45677899999999999999999999999999999887764 578999999999998743
Q ss_pred Cc-ceeecCcCcCcchHHHHHHHHHHHhcCCCccEEEecCceEEEEcccC-CCCCchHHHHHHHHHHHHHhcCCCcEEEe
Q 004314 667 DE-EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDA-DPGFGSSQAKELLDHLESVLANEPAAVKS 744 (761)
Q Consensus 667 ~~-~w~~~~~~~~~~w~~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~a-d~d~~~~qa~el~~~L~~~l~~~~v~V~~ 744 (761)
.. .|.... .....|++.+.++++.+.++ ||+++|+|+++++||||++ +++++..|+.++..++.. ..++.|..
T Consensus 80 ~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~~---~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNLT-EKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKILS---FTDLEVMD 154 (244)
T ss_pred Ccceeeech-hhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHhc---CCCEEEEE
Confidence 32 355421 22247999999999999887 9999999999999999999 888888888888777643 34689999
Q ss_pred CCeEEEEEeCCCCcCC
Q 004314 745 GQFIVEVKPQVYIQLR 760 (761)
Q Consensus 745 G~~~vEV~p~gvnKG~ 760 (761)
|+.++|++|.++|||.
T Consensus 155 g~~~~e~~p~~~~Kg~ 170 (244)
T TIGR00685 155 GKAVVELKPRFVNKGE 170 (244)
T ss_pred CCeEEEEeeCCCCHHH
Confidence 9999999999999985
No 21
>PLN02580 trehalose-phosphatase
Probab=99.93 E-value=3.4e-25 Score=241.37 Aligned_cols=169 Identities=22% Similarity=0.310 Sum_probs=137.3
Q ss_pred HHHHhccceeEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeE
Q 004314 584 SAYLRSKSRAILFDYDGTVMPQT--SINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYF 661 (761)
Q Consensus 584 ~~y~~s~~rlI~lDyDGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ 661 (761)
.+|.++++++|||||||||+|+. |..+.++++++++|++|+++ ..|+|||||+++.|++|++. ++++++|+||++
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 47899999999999999999987 46789999999999999986 46999999999999999985 579999999999
Q ss_pred EeecCC----cceeec-------------CcCcCcchHHHHHHHHHH---HhcCCCccEEEecCceEEEEcccCCCCCch
Q 004314 662 MRWSAD----EEWQNC-------------GQSVDFGWIQIAEPVMKL---YTESTDGSYIEIKESALVWHHRDADPGFGS 721 (761)
Q Consensus 662 ir~~~~----~~w~~~-------------~~~~~~~w~~~v~~im~~---y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~ 721 (761)
++.+.+ ..|..+ .+ ....|...+.++++. ++.+++|++||+|+++++||||+++++++.
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~-~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~ 267 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQ-PASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWP 267 (384)
T ss_pred eecCCCCcccccccccccccccccccccccc-cchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHH
Confidence 987521 123221 11 245688666666655 566789999999999999999999888766
Q ss_pred HHHHHHHHHHHHHhcCCC-cEEEeCCeEEEEEe-CCCCcCC
Q 004314 722 SQAKELLDHLESVLANEP-AAVKSGQFIVEVKP-QVYIQLR 760 (761)
Q Consensus 722 ~qa~el~~~L~~~l~~~~-v~V~~G~~~vEV~p-~gvnKG~ 760 (761)
.++.++...+. +.+ +.+..|++++||+| .++|||.
T Consensus 268 ~~~~~l~~~l~----~~~~l~v~~Gk~vlEVrP~~g~~KG~ 304 (384)
T PLN02580 268 LVAQCVHDVLK----KYPRLRLTHGRKVLEVRPVIDWNKGK 304 (384)
T ss_pred HHHHHHHHHHH----hCCceEEEeCCeEEEEecCCCCCHHH
Confidence 66666655543 344 88999999999999 5999995
No 22
>PLN02316 synthase/transferase
Probab=99.93 E-value=1.6e-23 Score=250.89 Aligned_cols=308 Identities=14% Similarity=0.112 Sum_probs=218.0
Q ss_pred HHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCCccchHHHHHHHh-----cCCCeEEEEEecCCCchhHHhcCcchHHHHH
Q 004314 179 WEAYVSANKIFSQRVIEV-INPEDDYVWIHDYHLMVLPTFLRRR-----FTRLRMGFFLHSPFPSSEIYRTLPVREEILK 252 (761)
Q Consensus 179 w~~Y~~vN~~fa~~i~~~-~~~~~DiVwvhDyhl~llp~~lr~~-----~~~~~ig~flH~PfP~~e~fr~lp~r~~il~ 252 (761)
..-|.-+++..++.+... ..| ||||+||+|..++|.++++. +.++++.++.|..- |. ...+-.
T Consensus 689 ~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~~----~n~lk~ 757 (1036)
T PLN02316 689 GERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----FG----ANHIGK 757 (1036)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----cc----hhHHHH
Confidence 344554455555544332 134 89999999999999999875 35689999999642 11 122345
Q ss_pred HhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhcc--c----------
Q 004314 253 ALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRL--A---------- 320 (761)
Q Consensus 253 ~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~--~---------- 320 (761)
++..||.|.--+..|++..+.. .. ...+..++.++|+|||++.|.+.... |
T Consensus 758 ~l~~AD~ViTVS~tya~EI~~~----~~-------------l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~ 820 (1036)
T PLN02316 758 AMAYADKATTVSPTYSREVSGN----SA-------------IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVE 820 (1036)
T ss_pred HHHHCCEEEeCCHHHHHHHHhc----cC-------------cccccCCEEEEECCccccccCCcccccccccCCchhhhh
Confidence 6778999999999988776531 00 01123477899999999988653210 0
Q ss_pred hHHHHHHHHHHHcC----CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHH
Q 004314 321 DKDWRVQELKQQFE----GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIH 396 (761)
Q Consensus 321 ~~~~~~~~lr~~~~----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~ 396 (761)
........+++++. +.++|++|+||++.||+..+++|+.++++. + +.||++|. |++ ..++.++.
T Consensus 821 gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~-----Gpd-~~~e~~l~ 888 (1036)
T PLN02316 821 GKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGS-----APD-PRIQNDFV 888 (1036)
T ss_pred hhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeC-----CCC-HHHHHHHH
Confidence 01122345777772 578999999999999999999999999863 3 34777773 343 34567788
Q ss_pred HHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceE
Q 004314 397 ATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSML 476 (761)
Q Consensus 397 ~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~l 476 (761)
+++.+++..+.. .|.|.. ..+......+|++||+||+||..|||||+.+|||+||. |+
T Consensus 889 ~La~~Lg~~~~~----rV~f~g-~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~Gt-----------------pp 946 (1036)
T PLN02316 889 NLANQLHSSHHD----RARLCL-TYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGS-----------------IP 946 (1036)
T ss_pred HHHHHhCccCCC----eEEEEe-cCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcCC-----------------Ce
Confidence 888877644321 366553 34444445899999999999999999999999999976 88
Q ss_pred EEcCCCCCcccc-c---------------CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHH-hhCCHHHHHHH
Q 004314 477 VVSEFIGCSPSL-S---------------GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARS 539 (761)
Q Consensus 477 V~Se~~G~~~~l-~---------------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~Wa~~ 539 (761)
|+|..+|..+.+ + +|++|+|.|+++++++|.++|......+....+..++.+ ..+++..-++.
T Consensus 947 Vvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~ 1026 (1036)
T PLN02316 947 VVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALD 1026 (1036)
T ss_pred EEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHH
Confidence 889999999887 2 389999999999999999999865322333233444444 45888888998
Q ss_pred HHHHHHHHH
Q 004314 540 FFQDMERTC 548 (761)
Q Consensus 540 ~l~~l~~~~ 548 (761)
|++-.+++.
T Consensus 1027 Y~~LY~~a~ 1035 (1036)
T PLN02316 1027 YMELYHSAR 1035 (1036)
T ss_pred HHHHHHHHh
Confidence 887766654
No 23
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.92 E-value=9.9e-24 Score=239.37 Aligned_cols=296 Identities=16% Similarity=0.130 Sum_probs=191.4
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchh--HHh------------cCcchHHH-HHHhhhcCEEeeeCHH
Q 004314 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSE--IYR------------TLPVREEI-LKALLNADLIGFHTFD 266 (761)
Q Consensus 202 DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e--~fr------------~lp~r~~i-l~~ll~~DligF~t~~ 266 (761)
|+|++|+++..++..++++.. ++|+.++.|....... +.. .+..+-.+ ...+..+|.|...+..
T Consensus 116 DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~ 194 (439)
T TIGR02472 116 DLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQ 194 (439)
T ss_pred CEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHH
Confidence 999999988777777776654 6789999997532210 000 00111001 1223456766655543
Q ss_pred HHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc--CCCeEEEeecC
Q 004314 267 YARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDD 344 (761)
Q Consensus 267 ~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdR 344 (761)
.+..-+. ...+ -...++.++|+|||++.|.+....++.......+++.. +++++|++|||
T Consensus 195 ~~~~~~~---~~~~---------------~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGr 256 (439)
T TIGR02472 195 EIEEQYA---LYDS---------------YQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAISR 256 (439)
T ss_pred HHHHHHH---hccC---------------CCccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCCcEEEEEcC
Confidence 3222110 0001 12347889999999999975422111111112222222 46789999999
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCcCceeEEEEec-CCCCCch-hHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCC
Q 004314 345 MDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIAN-PARGRGK-DLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVT 422 (761)
Q Consensus 345 ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~-p~r~~~~-~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~ 422 (761)
+++.||+..+|+||.++.+..+.. ++++ ++|. +.+.... ...++.+++.+++++++- .+ .|. +.+.++
T Consensus 257 l~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l----~~--~V~-f~g~~~ 326 (439)
T TIGR02472 257 PDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRDDIRKMESQQREVLQKVLLLIDRYDL----YG--KVA-YPKHHR 326 (439)
T ss_pred CcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCccccccccHHHHHHHHHHHHHHHHcCC----Cc--eEE-ecCCCC
Confidence 999999999999998643221111 2322 3342 1111100 011223344555555431 11 355 457889
Q ss_pred HHHHHHHHHhc----ccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEEC
Q 004314 423 LSERAAYYTIA----ECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVN 495 (761)
Q Consensus 423 ~~el~aly~~A----Dv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~Vn 495 (761)
.+++.++|+.| |+||+||.+||||++++||||||. |+|+|..+|+.+.+. +|++|+
T Consensus 327 ~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~-----------------PvV~s~~gg~~eiv~~~~~G~lv~ 389 (439)
T TIGR02472 327 PDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGL-----------------PIVATDDGGPRDIIANCRNGLLVD 389 (439)
T ss_pred HHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCC-----------------CEEEeCCCCcHHHhcCCCcEEEeC
Confidence 99999999988 999999999999999999999986 999999999998884 489999
Q ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHHHHH
Q 004314 496 PWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQDM 544 (761)
Q Consensus 496 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l~~l 544 (761)
|.|++++|++|.++++++ ++++.+.++.++++. .+++..-++++++-|
T Consensus 390 ~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 390 VLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred CCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999999865 466777777888775 578888888777654
No 24
>PRK14098 glycogen synthase; Provisional
Probab=99.92 E-value=1.6e-23 Score=240.04 Aligned_cols=318 Identities=15% Similarity=0.148 Sum_probs=215.0
Q ss_pred hHHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCCccchHHHHHHHhc------CCCeEEEEEecCC-----CchhHHhcCc
Q 004314 178 LWEAYVSANKIFSQRVIEV-INPEDDYVWIHDYHLMVLPTFLRRRF------TRLRMGFFLHSPF-----PSSEIYRTLP 245 (761)
Q Consensus 178 ~w~~Y~~vN~~fa~~i~~~-~~~~~DiVwvhDyhl~llp~~lr~~~------~~~~ig~flH~Pf-----P~~e~fr~lp 245 (761)
....|.-.++..++.+.+. ++| |+||+||+|..++|.+++++. .++|++++.|... |...+-..+|
T Consensus 120 ~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~ 197 (489)
T PRK14098 120 SAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLP 197 (489)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCC
Confidence 4455665566665555432 244 899999999999999998764 4789999999852 2211111133
Q ss_pred ch------------HHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccc
Q 004314 246 VR------------EEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQI 313 (761)
Q Consensus 246 ~r------------~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f 313 (761)
+. .-+-.++..||.|..-++.|++...+....-.|++. . +..+..++.++|+|||++.|
T Consensus 198 ~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~-----~----l~~~~~kl~~I~NGID~~~~ 268 (489)
T PRK14098 198 EEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK-----V----LEERKMRLHGILNGIDTRQW 268 (489)
T ss_pred HHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH-----H----HHhcCCCeeEEeCCcccccc
Confidence 21 112235678898888888888764320000011100 0 01134578899999999998
Q ss_pred hhhhccc-----------hHHHHHHHHHHHc-----CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEE
Q 004314 314 ESVLRLA-----------DKDWRVQELKQQF-----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQI 377 (761)
Q Consensus 314 ~~~~~~~-----------~~~~~~~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 377 (761)
.+..... ...+....+++++ +++++|++|+|+++.||+..+++|+.++++. + +.|+++
T Consensus 269 ~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lviv 342 (489)
T PRK14098 269 NPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVIC 342 (489)
T ss_pred CCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEEE
Confidence 7642110 0112234566655 2567999999999999999999999998752 3 458888
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeec
Q 004314 378 ANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (761)
Q Consensus 378 ~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 457 (761)
|. |+. .+++++++++++.. ..|.+. +.++.+++..+|+.||+||+||..||||++.+|||+||.
T Consensus 343 G~-----G~~--~~~~~l~~l~~~~~--------~~V~~~-g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ 406 (489)
T PRK14098 343 GS-----GDK--EYEKRFQDFAEEHP--------EQVSVQ-TEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGT 406 (489)
T ss_pred eC-----CCH--HHHHHHHHHHHHCC--------CCEEEE-EecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCC
Confidence 73 322 34566677766532 136655 468899999999999999999999999999999999975
Q ss_pred CCCCCCCCCCCCCCCCceEEEcCCCCCccccc-------CcEEECCCCHHHHHHHHHHHHcC--CHHHHHHHHHHHhhHH
Q 004314 458 GVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-------GAIRVNPWNIEATAEAMHEAIQM--NEAEKQLRHEKHYRYV 528 (761)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-------~al~VnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~v 528 (761)
|+|++..+|+.+.+. +|++++|.|++++|++|.+++.+ .++.++.+.++. ..
T Consensus 407 -----------------ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~--~~ 467 (489)
T PRK14098 407 -----------------IPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA--ME 467 (489)
T ss_pred -----------------CeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH--hc
Confidence 788999999988772 48999999999999999998743 222222222211 23
Q ss_pred hhCCHHHHHHHHHHHHHHH
Q 004314 529 STHDVAYWARSFFQDMERT 547 (761)
Q Consensus 529 ~~~~~~~Wa~~~l~~l~~~ 547 (761)
+.+++..-++++++-.+++
T Consensus 468 ~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 468 RDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred CCCChHHHHHHHHHHHHHH
Confidence 5678888888887766554
No 25
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.92 E-value=1.2e-23 Score=240.78 Aligned_cols=292 Identities=17% Similarity=0.233 Sum_probs=202.4
Q ss_pred CCEEEEeCCccchHHHHHHHhcC--CCeEEEEEecCCC----chhHHhcC--cch------------HH-HHHHhhhcCE
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFT--RLRMGFFLHSPFP----SSEIYRTL--PVR------------EE-ILKALLNADL 259 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~--~~~ig~flH~PfP----~~e~fr~l--p~r------------~~-il~~ll~~Dl 259 (761)
-|+||+||+|..++|.++++... ++|+.++.|...+ +.+.+..+ |+. -. +-.++..||.
T Consensus 129 ~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 208 (473)
T TIGR02095 129 PDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADR 208 (473)
T ss_pred CCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCc
Confidence 38999999999999999988765 3899999998642 12222221 111 01 1234567777
Q ss_pred EeeeCHHHHHHHHHHHhhhcCceeeccCceeEEE--EcCeEEEEEEeccccCcccchhhhccc-----------hHHHHH
Q 004314 260 IGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLE--YYGRTVGIKIMPVGIHMGQIESVLRLA-----------DKDWRV 326 (761)
Q Consensus 260 igF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~--~~gr~~~i~v~P~GId~~~f~~~~~~~-----------~~~~~~ 326 (761)
|...+..|++..... ..|. +++ +..+..++.++|+|||.+.|.+..... ......
T Consensus 209 v~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k 276 (473)
T TIGR02095 209 VTTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENK 276 (473)
T ss_pred CeecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhH
Confidence 777777776654321 0000 000 011335788999999999987532100 011223
Q ss_pred HHHHHHcC-----CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 004314 327 QELKQQFE-----GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKR 401 (761)
Q Consensus 327 ~~lr~~~~-----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~ 401 (761)
..++++++ ++++|++|||+++.||+..+++|++++.++. +.|+++|. |+ .++++++++++.+
T Consensus 277 ~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~-----g~--~~~~~~l~~~~~~ 343 (473)
T TIGR02095 277 EALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGT-----GD--PELEEALRELAER 343 (473)
T ss_pred HHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECC-----CC--HHHHHHHHHHHHH
Confidence 45677762 6789999999999999999999999987542 44887773 22 2355667777654
Q ss_pred HhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCC
Q 004314 402 INETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF 481 (761)
Q Consensus 402 in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~ 481 (761)
.+. .+.++. ..+.+++..+|+.||++++||..||||++.+|||+||. |+|+|..
T Consensus 344 ~~~--------~v~~~~-~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~-----------------pvI~s~~ 397 (473)
T TIGR02095 344 YPG--------NVRVII-GYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGT-----------------VPIVRRT 397 (473)
T ss_pred CCC--------cEEEEE-cCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCC-----------------CeEEccC
Confidence 321 355554 56788899999999999999999999999999999976 8999999
Q ss_pred CCCccccc---------CcEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHH
Q 004314 482 IGCSPSLS---------GAIRVNPWNIEATAEAMHEAIQM---NEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (761)
Q Consensus 482 ~G~~~~l~---------~al~VnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~ 545 (761)
+|..+.+. +|++++|.|++++|++|.++|.+ .++.++.+.++.. .+.+++..-++++++-.+
T Consensus 398 gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 398 GGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred CCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHH
Confidence 99999883 38999999999999999999873 2223333333322 256888888888776544
No 26
>PRK14099 glycogen synthase; Provisional
Probab=99.92 E-value=5.6e-23 Score=235.33 Aligned_cols=294 Identities=18% Similarity=0.180 Sum_probs=194.0
Q ss_pred CEEEEeCCccchHHHHHHHh-cCCCeEEEEEecC-----CCchhHHhc--CcchH-------------HHHHHhhhcCEE
Q 004314 202 DYVWIHDYHLMVLPTFLRRR-FTRLRMGFFLHSP-----FPSSEIYRT--LPVRE-------------EILKALLNADLI 260 (761)
Q Consensus 202 DiVwvhDyhl~llp~~lr~~-~~~~~ig~flH~P-----fP~~e~fr~--lp~r~-------------~il~~ll~~Dli 260 (761)
||||+||+|..++|.+++.+ ..+++++++.|.. ||. ..+.. +|... -+-.++..||.|
T Consensus 135 DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~v 213 (485)
T PRK14099 135 DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRI 213 (485)
T ss_pred CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCee
Confidence 89999999999999998753 2467899999974 332 11111 11100 123345667777
Q ss_pred eeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccc-----------hHHHHHHHH
Q 004314 261 GFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLA-----------DKDWRVQEL 329 (761)
Q Consensus 261 gF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~-----------~~~~~~~~l 329 (761)
.--+..+++...+.- .-.|++. . +..+..++.++|+|||++.|.+..... ........+
T Consensus 214 itVS~~~a~ei~~~~-~g~gl~~-----~----l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l 283 (485)
T PRK14099 214 TTVSPTYALEIQGPE-AGMGLDG-----L----LRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAAL 283 (485)
T ss_pred eecChhHHHHHhccc-CCcChHH-----H----HHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHH
Confidence 766766665543200 0001000 0 011235788999999999987642100 001123456
Q ss_pred HHHcC-----CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhc
Q 004314 330 KQQFE-----GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINE 404 (761)
Q Consensus 330 r~~~~-----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~ 404 (761)
+++++ +.+++++|+|+++.||+..+++|+.+++++ + +.|+++|. |+ .++++++++++.+..
T Consensus 284 ~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~-----G~--~~~~~~l~~l~~~~~- 349 (485)
T PRK14099 284 QARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGS-----GD--AELEARFRAAAQAYP- 349 (485)
T ss_pred HHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEec-----CC--HHHHHHHHHHHHHCC-
Confidence 67662 356788899999999999999999998753 2 44887773 22 234556666665432
Q ss_pred ccCCCCCccEEEEcCCCCHHHHHHHH-HhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCC
Q 004314 405 TFGRPGYEPVVFIDKPVTLSERAAYY-TIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG 483 (761)
Q Consensus 405 ~~g~~~~~pV~~~~~~v~~~el~aly-~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 483 (761)
..++++.+. .+++..+| +.||+||+||.+||||++.+|||+||. |+|+|..+|
T Consensus 350 -------~~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~-----------------ppVvs~~GG 403 (485)
T PRK14099 350 -------GQIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGA-----------------VPVVARVGG 403 (485)
T ss_pred -------CCEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCC-----------------CcEEeCCCC
Confidence 135444454 67888877 569999999999999999999999975 677799999
Q ss_pred Cccccc------------CcEEECCCCHHHHHHHHHHHHc--CCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHHH
Q 004314 484 CSPSLS------------GAIRVNPWNIEATAEAMHEAIQ--MNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTC 548 (761)
Q Consensus 484 ~~~~l~------------~al~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~~ 548 (761)
..+.+. .|++|+|.|++++|++|.+++. ..++.++...++.+ .+.+++..-++++++-.+++.
T Consensus 404 l~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~l~ 480 (485)
T PRK14099 404 LADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAALYRSLV 480 (485)
T ss_pred ccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHHHHHHHH
Confidence 888762 3899999999999999998542 12233333333332 367888888888877766654
No 27
>PLN03017 trehalose-phosphatase
Probab=99.92 E-value=4.4e-24 Score=230.70 Aligned_cols=168 Identities=23% Similarity=0.275 Sum_probs=136.3
Q ss_pred HHHhccceeEEecCCCcCCCCCC--CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEE
Q 004314 585 AYLRSKSRAILFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFM 662 (761)
Q Consensus 585 ~y~~s~~rlI~lDyDGTL~~~~~--~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~i 662 (761)
++.+.++++||+||||||+|+.+ ..+.++++++++|++|++ +..|+|+|||++..+.++++ +.+++++|+||+++
T Consensus 105 ~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-l~~l~l~g~hGa~i 181 (366)
T PLN03017 105 EASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNFVK-LAELYYAGSHGMDI 181 (366)
T ss_pred HHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHhhc-ccCceEEEcCCcEE
Confidence 34556789999999999998774 345799999999999994 68899999999999999975 46799999999999
Q ss_pred eecCCcceee-------cCcCcCcchHHHHHHH---HHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHH
Q 004314 663 RWSADEEWQN-------CGQSVDFGWIQIAEPV---MKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLE 732 (761)
Q Consensus 663 r~~~~~~w~~-------~~~~~~~~w~~~v~~i---m~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~ 732 (761)
+.+++ .|.. ........|+..+.++ ++.+++++||++||+|+++++||||+++++ .+.++..++.
T Consensus 182 ~~p~~-~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~----~~~~l~~~~~ 256 (366)
T PLN03017 182 KGPAK-GFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEK----KWSELVLQVR 256 (366)
T ss_pred ecCCC-cceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHH----HHHHHHHHHH
Confidence 97643 3321 0012234587777766 556778999999999999999999999764 3467788888
Q ss_pred HHhcCCC-cEEEeCCeEEEEEeC-CCCcCC
Q 004314 733 SVLANEP-AAVKSGQFIVEVKPQ-VYIQLR 760 (761)
Q Consensus 733 ~~l~~~~-v~V~~G~~~vEV~p~-gvnKG~ 760 (761)
..+.+.+ +.+..|++++||+|. ++|||+
T Consensus 257 ~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~ 286 (366)
T PLN03017 257 SVLKNFPTLKLTQGRKVFEIRPMIEWDKGK 286 (366)
T ss_pred HHHHhCCCcEEeCCCeEEEecCCCCCCHHH
Confidence 8887776 899999999999995 999996
No 28
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.91 E-value=1.8e-22 Score=225.89 Aligned_cols=287 Identities=16% Similarity=0.154 Sum_probs=209.7
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhc---Ccc--hHHHHH--HhhhcCEEeeeCHHHHHHHHH
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRT---LPV--REEILK--ALLNADLIGFHTFDYARHFLS 273 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~---lp~--r~~il~--~ll~~DligF~t~~~~~~Fl~ 273 (761)
.|+|++|++....++.++++. .++|+++++|..++-...+.. .|. ...+++ .+..+|.+.+.+...++.+..
T Consensus 102 ~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~ 180 (405)
T TIGR03449 102 YDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVR 180 (405)
T ss_pred CCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHH
Confidence 489999997666666666554 468899999975431111110 111 112221 345789999999988877653
Q ss_pred HHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccCC
Q 004314 274 CCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKG 350 (761)
Q Consensus 274 ~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 350 (761)
. .+. ...++.++|+|||.+.|.+.. ....+.++ .++++|+++||+.+.||
T Consensus 181 ~----~~~---------------~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~ 233 (405)
T TIGR03449 181 H----YDA---------------DPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKA 233 (405)
T ss_pred H----cCC---------------ChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccC
Confidence 1 121 224678899999998886421 11234444 36789999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCc-hhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHH
Q 004314 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRG-KDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAY 429 (761)
Q Consensus 351 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~-~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~al 429 (761)
+..+++|++++++++|+ .++.|+++|.+.. ++ +.. +++++++++.+.. ..|.| .+.++.+++..+
T Consensus 234 ~~~li~a~~~l~~~~~~--~~~~l~ivG~~~~-~g~~~~----~~l~~~~~~~~l~------~~v~~-~g~~~~~~~~~~ 299 (405)
T TIGR03449 234 PDVLLRAVAELLDRDPD--RNLRVIVVGGPSG-SGLATP----DALIELAAELGIA------DRVRF-LPPRPPEELVHV 299 (405)
T ss_pred HHHHHHHHHHHHhhCCC--cceEEEEEeCCCC-CcchHH----HHHHHHHHHcCCC------ceEEE-CCCCCHHHHHHH
Confidence 99999999999998887 2467888886532 23 222 3455555554421 13554 568999999999
Q ss_pred HHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHH
Q 004314 430 YTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAM 506 (761)
Q Consensus 430 y~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai 506 (761)
|+.||++++||..||||++++|||+||. |+|+|..+|..+.+. .|++++|.|++++|++|
T Consensus 300 l~~ad~~v~ps~~E~~g~~~lEAma~G~-----------------Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i 362 (405)
T TIGR03449 300 YRAADVVAVPSYNESFGLVAMEAQACGT-----------------PVVAARVGGLPVAVADGETGLLVDGHDPADWADAL 362 (405)
T ss_pred HHhCCEEEECCCCCCcChHHHHHHHcCC-----------------CEEEecCCCcHhhhccCCceEECCCCCHHHHHHHH
Confidence 9999999999999999999999999976 999999999888773 38999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHH
Q 004314 507 HEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERT 547 (761)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~ 547 (761)
.++++.+ +++..+.++.++++..+++...++++++-+.++
T Consensus 363 ~~~l~~~-~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 363 ARLLDDP-RTRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999864 355566666778888899999999888776653
No 29
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.91 E-value=9.1e-23 Score=228.17 Aligned_cols=284 Identities=16% Similarity=0.186 Sum_probs=196.4
Q ss_pred hCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCc--hhH-Hh-cCcc--------hHH---HHHHhhhcCEEe
Q 004314 197 INPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPS--SEI-YR-TLPV--------REE---ILKALLNADLIG 261 (761)
Q Consensus 197 ~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~--~e~-fr-~lp~--------r~~---il~~ll~~Dlig 261 (761)
++| |+|+.| +.+....++++.+|++++..+.|..+-. .+. |. ..+. +.. ....+-.+|.+.
T Consensus 86 ~~p--dvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 161 (396)
T cd03818 86 FRP--DVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAGV 161 (396)
T ss_pred CCC--CEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEE
Confidence 445 899999 4556667899999999988776643311 110 10 0111 111 234466778877
Q ss_pred eeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeE
Q 004314 262 FHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTV 338 (761)
Q Consensus 262 F~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~v 338 (761)
..+....+.|.+ ... .++.++|+|||.+.|.+... . ...++... .++++
T Consensus 162 ~~s~~~~~~~~~--------------------~~~--~ki~vI~ngvd~~~f~~~~~---~---~~~~~~~~~~~~~~~~ 213 (396)
T cd03818 162 SPTRWQRSTFPA--------------------ELR--SRISVIHDGIDTDRLRPDPQ---A---RLRLPNGRVLTPGDEV 213 (396)
T ss_pred CCCHHHHhhCcH--------------------hhc--cceEEeCCCccccccCCCch---h---hhcccccccCCCCCeE
Confidence 766644433321 011 36789999999999875321 1 11122111 46789
Q ss_pred EEeecC-ccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchh---HHHHHHHHHHHHHHHhcccCCCCCccE
Q 004314 339 LLGVDD-MDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKD---LEEIQAEIHATCKRINETFGRPGYEPV 414 (761)
Q Consensus 339 il~VdR-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~---~~~l~~ev~~lv~~in~~~g~~~~~pV 414 (761)
|++++| +.+.||+..+++|+.++.+++|+++ |++||......+.. ..+++ +++.++++.+.+ ...|
T Consensus 214 i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~---~~~V 283 (396)
T cd03818 214 ITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWK---QHMLDELGGRLD---LSRV 283 (396)
T ss_pred EEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHH---HHHHHHhhcccC---cceE
Confidence 999998 9999999999999999998888876 88888532111110 01111 122333332221 1246
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---Cc
Q 004314 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GA 491 (761)
Q Consensus 415 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~a 491 (761)
+|+ |.++.+++.++|+.||++++||..||+|++++||||||. |+|+|+.+|..+.+. .|
T Consensus 284 ~f~-G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~-----------------PVIas~~~g~~e~i~~~~~G 345 (396)
T cd03818 284 HFL-GRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC-----------------LVVGSDTAPVREVITDGENG 345 (396)
T ss_pred EEe-CCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC-----------------CEEEcCCCCchhhcccCCce
Confidence 654 689999999999999999999999999999999999986 999999999888884 48
Q ss_pred EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhh-CCHHHHHHHHH
Q 004314 492 IRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWARSFF 541 (761)
Q Consensus 492 l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~Wa~~~l 541 (761)
++|+|.|++++|++|.++++++ +++..+.++.++++.+ +++..-+++++
T Consensus 346 ~lv~~~d~~~la~~i~~ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 346 LLVDFFDPDALAAAVIELLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred EEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 9999999999999999999876 4666677778888877 77666666554
No 30
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.91 E-value=2.5e-22 Score=225.62 Aligned_cols=275 Identities=15% Similarity=0.104 Sum_probs=200.2
Q ss_pred CCEEEEeCCccchHHHHHHHh-cCCCeEEEEEecCCCc-hhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhh
Q 004314 201 DDYVWIHDYHLMVLPTFLRRR-FTRLRMGFFLHSPFPS-SEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRM 278 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~-~~~~~ig~flH~PfP~-~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~ 278 (761)
-|+|+.|..+.-.+..++++. ....++.+++|.+-.. ..+.. ..+..+-+.+-.+|.|...+....+.+.+
T Consensus 119 ~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~----- 191 (406)
T PRK15427 119 ADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK----- 191 (406)
T ss_pred CCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH-----
Confidence 489999988776666777663 2244667788965221 11110 01112223345789988777655444321
Q ss_pred cCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHH
Q 004314 279 LGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAM 358 (761)
Q Consensus 279 lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~ 358 (761)
+|. ...+|.++|+|||.+.|.+... ....+...|++|||+.+.||+..+++|+
T Consensus 192 ~g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a~ 244 (406)
T PRK15427 192 MGC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEAC 244 (406)
T ss_pred cCC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHHH
Confidence 121 1236778999999998864211 0123456799999999999999999999
Q ss_pred HHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhccccee
Q 004314 359 EHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVV 438 (761)
Q Consensus 359 ~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv 438 (761)
.++.+++|+++ |+++| +|+.. +++++++++.+. ...+.+.|.++.+++..+|+.||+||+
T Consensus 245 ~~l~~~~~~~~----l~ivG-----~G~~~----~~l~~~~~~~~l-------~~~V~~~G~~~~~el~~~l~~aDv~v~ 304 (406)
T PRK15427 245 RQLKEQGVAFR----YRILG-----IGPWE----RRLRTLIEQYQL-------EDVVEMPGFKPSHEVKAMLDDADVFLL 304 (406)
T ss_pred HHHHhhCCCEE----EEEEE-----CchhH----HHHHHHHHHcCC-------CCeEEEeCCCCHHHHHHHHHhCCEEEE
Confidence 99988888765 88887 34433 445555555431 233445679999999999999999999
Q ss_pred cccc------cCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHH
Q 004314 439 TAVR------DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEA 509 (761)
Q Consensus 439 tS~~------EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~a 509 (761)
||.. ||++++.+||||||. |+|+|..+|+.+.+. +|++|+|.|++++|++|.++
T Consensus 305 pS~~~~~g~~Eg~p~~llEAma~G~-----------------PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l 367 (406)
T PRK15427 305 PSVTGADGDMEGIPVALMEAMAVGI-----------------PVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAF 367 (406)
T ss_pred CCccCCCCCccCccHHHHHHHhCCC-----------------CEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHH
Confidence 9984 999999999999986 999999999988883 48999999999999999999
Q ss_pred HcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHHHHHHH
Q 004314 510 IQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQDMER 546 (761)
Q Consensus 510 L~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l~~l~~ 546 (761)
+++.+++++.+.++.++++. ++++...++++.+-+++
T Consensus 368 ~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 368 SQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 99666677778888888875 58999888888776653
No 31
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.90 E-value=1.1e-21 Score=230.56 Aligned_cols=337 Identities=12% Similarity=0.168 Sum_probs=210.5
Q ss_pred HhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCC----CchhH-HhcC------c
Q 004314 177 SLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPF----PSSEI-YRTL------P 245 (761)
Q Consensus 177 ~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~Pf----P~~e~-fr~l------p 245 (761)
+.|....+++...++.+.......-|+|+.|.+.--+++..++++. +++..++.|..= +.+.. +... .
T Consensus 362 ~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~ 440 (784)
T TIGR02470 362 EIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFS 440 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhh
Confidence 4566666655556655554433223899999887778888887765 688888888541 11110 0001 0
Q ss_pred ch-HHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceee-ccCcee----EEEEcCeEEEEEEeccccCcccchhhhcc
Q 004314 246 VR-EEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQ-SKRGYI----GLEYYGRTVGIKIMPVGIHMGQIESVLRL 319 (761)
Q Consensus 246 ~r-~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~-~~~g~~----~~~~~gr~~~i~v~P~GId~~~f~~~~~~ 319 (761)
.+ ..-+..|-.||.|.-.|++-...-...+.. .+.... +..+.. ++++. ..++.++|+|+|++.|.+....
T Consensus 441 ~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q-Y~s~~~ft~p~Ly~vvnGid~~--~~Ki~VVpPGVD~~iF~P~~~~ 517 (784)
T TIGR02470 441 CQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ-YESHQAFTMPGLYRVVHGIDVF--DPKFNIVSPGADESIYFPYSDK 517 (784)
T ss_pred hhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh-hhhcccccccceeeeecCccCC--cCCeEEECCCcChhhcCCCCch
Confidence 01 001245677999998886543211111100 000000 000111 11111 2378899999999999764321
Q ss_pred chHH-HHH----------HHHHHHc-----CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCC
Q 004314 320 ADKD-WRV----------QELKQQF-----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARG 383 (761)
Q Consensus 320 ~~~~-~~~----------~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~ 383 (761)
.... ... ...++.+ +++++|++|+|+++.||+..+++||.++.+..+ .+.||+||++...
T Consensus 518 ~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGGg~~~ 593 (784)
T TIGR02470 518 EKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAGKLDA 593 (784)
T ss_pred hhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeCCccc
Confidence 1000 000 0112332 478899999999999999999999987644333 3558888864321
Q ss_pred ---CchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHH-h---cccceecccccCCCcchhhheeee
Q 004314 384 ---RGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT-I---AECVVVTAVRDGMNLTPYEYIVCR 456 (761)
Q Consensus 384 ---~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~-~---ADv~vvtS~~EGmnLv~~Eama~~ 456 (761)
...+..+..+++.+++++.+. . ..|.|++...+..+...+|+ + +||||+||.+||||||++||||||
T Consensus 594 ~~s~d~ee~~~i~~L~~la~~~gL----~--g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcG 667 (784)
T TIGR02470 594 KESKDREEQAEIEKMHNLIDQYQL----H--GQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCG 667 (784)
T ss_pred ccccchhHHHHHHHHHHHHHHhCC----C--CeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcC
Confidence 111122233556666666442 1 24776653346666667775 2 469999999999999999999998
Q ss_pred cCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHhhHH-h
Q 004314 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQ---MNEAEKQLRHEKHYRYV-S 529 (761)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v-~ 529 (761)
. |+|+|..+|+.+.+. +|++|+|.|++++|++|.++++ ..++.++...++.+++| +
T Consensus 668 l-----------------PVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~ 730 (784)
T TIGR02470 668 L-----------------PTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYE 730 (784)
T ss_pred C-----------------CEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 6 999999999999883 4999999999999999999874 23445555566677777 5
Q ss_pred hCCHHHHHHHHHHHH
Q 004314 530 THDVAYWARSFFQDM 544 (761)
Q Consensus 530 ~~~~~~Wa~~~l~~l 544 (761)
.++|...+++++..+
T Consensus 731 ~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 731 KYTWKIYSERLLTLA 745 (784)
T ss_pred hCCHHHHHHHHHHHH
Confidence 688888888877654
No 32
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.90 E-value=5.8e-22 Score=226.56 Aligned_cols=283 Identities=15% Similarity=0.188 Sum_probs=199.9
Q ss_pred HHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcch-H---HHHHHh-hhcCEEeeeCHHHH
Q 004314 194 IEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVR-E---EILKAL-LNADLIGFHTFDYA 268 (761)
Q Consensus 194 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r-~---~il~~l-l~~DligF~t~~~~ 268 (761)
++..+| |+||+|+...+.++.++-.+..++|+.+.+|.-+|..--....++. + .+.+.+ ..+|.|...+....
T Consensus 140 i~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~ 217 (465)
T PLN02871 140 VARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALG 217 (465)
T ss_pred HHhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHH
Confidence 333455 8999998766655554433345788888888765432110011110 0 112222 35788888887766
Q ss_pred HHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc----CCCeEEEeecC
Q 004314 269 RHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF----EGKTVLLGVDD 344 (761)
Q Consensus 269 ~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~----~~~~vil~VdR 344 (761)
+.|.. .+. ....++.++|+|||.+.|.+.... ..+++++ +++++|+++||
T Consensus 218 ~~l~~-----~~~--------------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGr 271 (465)
T PLN02871 218 KELEA-----AGV--------------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGR 271 (465)
T ss_pred HHHHH-----cCC--------------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCC
Confidence 66542 111 012367889999999998753221 1233333 46789999999
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHH
Q 004314 345 MDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLS 424 (761)
Q Consensus 345 ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~ 424 (761)
+.+.||+..+++|++++ |+++ |+++| +|+.. ++++++++.. +|+|+ |.++.+
T Consensus 272 l~~~K~~~~li~a~~~~----~~~~----l~ivG-----~G~~~----~~l~~~~~~~----------~V~f~-G~v~~~ 323 (465)
T PLN02871 272 LGAEKNLDFLKRVMERL----PGAR----LAFVG-----DGPYR----EELEKMFAGT----------PTVFT-GMLQGD 323 (465)
T ss_pred CchhhhHHHHHHHHHhC----CCcE----EEEEe-----CChHH----HHHHHHhccC----------CeEEe-ccCCHH
Confidence 99999999999888653 5544 88887 34433 3444444321 46654 689999
Q ss_pred HHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc------CcEEECCCC
Q 004314 425 ERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS------GAIRVNPWN 498 (761)
Q Consensus 425 el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------~al~VnP~d 498 (761)
++..+|+.||++|+||..||||++++||||||. |+|+|..+|+.+.+. +|++++|.|
T Consensus 324 ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~-----------------PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d 386 (465)
T PLN02871 324 ELSQAYASGDVFVMPSESETLGFVVLEAMASGV-----------------PVVAARAGGIPDIIPPDQEGKTGFLYTPGD 386 (465)
T ss_pred HHHHHHHHCCEEEECCcccccCcHHHHHHHcCC-----------------CEEEcCCCCcHhhhhcCCCCCceEEeCCCC
Confidence 999999999999999999999999999999986 999999999888773 389999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHH-HHHHHHh
Q 004314 499 IEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQD-MERTCKD 550 (761)
Q Consensus 499 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~-l~~~~~~ 550 (761)
++++|++|.++++.+ +.++.+.++.++++.++++...++++++. -.++...
T Consensus 387 ~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 387 VDDCVEKLETLLADP-ELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred HHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999854 45666677788889999999999999874 4444433
No 33
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.90 E-value=5.5e-22 Score=222.09 Aligned_cols=278 Identities=14% Similarity=0.142 Sum_probs=197.3
Q ss_pred hCCCCCEEEEeCCccchH-HHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHH-hhhcCEEeeeCHHHHHHHHHH
Q 004314 197 INPEDDYVWIHDYHLMVL-PTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKA-LLNADLIGFHTFDYARHFLSC 274 (761)
Q Consensus 197 ~~~~~DiVwvhDyhl~ll-p~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~-ll~~DligF~t~~~~~~Fl~~ 274 (761)
.+| |+|++|+++.... ...+-.+..++|++++.|..|+..+... .+...+.+. +-.+|.+.+.+....+.+...
T Consensus 87 ~~~--DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 162 (398)
T cd03796 87 ERI--TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASS--IHTNKLLRFSLADVDHVICVSHTSKENTVLR 162 (398)
T ss_pred cCC--CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhh--HHhhHHHHHhhccCCEEEEecHhHhhHHHHH
Confidence 355 8999999875533 2333334456899999998775332211 111222232 346888888887666554321
Q ss_pred HhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHH
Q 004314 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354 (761)
Q Consensus 275 ~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~ 354 (761)
.+ ....++.++|+|+|.+.|.+... . ..+++++++++||+++.||+..+
T Consensus 163 ----~~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~~~l 211 (398)
T cd03796 163 ----AS---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGIDLL 211 (398)
T ss_pred ----hC---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCHHHH
Confidence 01 12246788999999988864211 0 12567899999999999999999
Q ss_pred HHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcc
Q 004314 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAE 434 (761)
Q Consensus 355 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 434 (761)
++|+..+.+++|+++ |+++|. ++.. +++++++++.+. . ..|.++ |.++.+++.++|+.||
T Consensus 212 i~a~~~l~~~~~~~~----l~i~G~-----g~~~----~~l~~~~~~~~l----~--~~v~~~-G~~~~~~~~~~l~~ad 271 (398)
T cd03796 212 VGIIPEICKKHPNVR----FIIGGD-----GPKR----ILLEEMREKYNL----Q--DRVELL-GAVPHERVRDVLVQGH 271 (398)
T ss_pred HHHHHHHHhhCCCEE----EEEEeC-----CchH----HHHHHHHHHhCC----C--CeEEEe-CCCCHHHHHHHHHhCC
Confidence 999999988888765 887773 3433 334455554331 1 136654 6899999999999999
Q ss_pred cceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-C-cEEECCCCHHHHHHHHHHHHcC
Q 004314 435 CVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G-AIRVNPWNIEATAEAMHEAIQM 512 (761)
Q Consensus 435 v~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-al~VnP~d~~~~A~ai~~aL~m 512 (761)
++++||..||||++.+||||||. |+|+|..+|..+.+. + +++++| |+++++++|.+++.+
T Consensus 272 ~~v~pS~~E~~g~~~~EAma~G~-----------------PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~~l~~ 333 (398)
T cd03796 272 IFLNTSLTEAFCIAIVEAASCGL-----------------LVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEEAISI 333 (398)
T ss_pred EEEeCChhhccCHHHHHHHHcCC-----------------CEEECCCCCchhheeCCceeecCC-CHHHHHHHHHHHHhC
Confidence 99999999999999999999986 899999999988884 4 445555 999999999999997
Q ss_pred CHHHHHHHHHHHhhHH-hhCCHHHHHHHHHHHHHHHH
Q 004314 513 NEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMERTC 548 (761)
Q Consensus 513 ~~~er~~r~~~~~~~v-~~~~~~~Wa~~~l~~l~~~~ 548 (761)
+.+. ....++.++.+ ..+++..-++++++..+++.
T Consensus 334 ~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~ 369 (398)
T cd03796 334 LRTG-KHDPWSFHNRVKKMYSWEDVAKRTEKVYDRIL 369 (398)
T ss_pred hhhh-hhHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 6533 33445555554 55888888998888877754
No 34
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.90 E-value=8.4e-22 Score=225.60 Aligned_cols=310 Identities=16% Similarity=0.210 Sum_probs=206.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhc-----CCCeEEEEEecCCCch----hHHhcC--cc---
Q 004314 181 AYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRF-----TRLRMGFFLHSPFPSS----EIYRTL--PV--- 246 (761)
Q Consensus 181 ~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~-----~~~~ig~flH~PfP~~----e~fr~l--p~--- 246 (761)
.|.-.++...+.+.+. ...-|+||+||+|..++|.++++.+ .++|+.|+.|.+.+.. ..+..+ ++
T Consensus 111 ~~~~f~~~~~~~l~~~-~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~ 189 (476)
T cd03791 111 RFALFSRAALELLRRL-GWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEEL 189 (476)
T ss_pred HHHHHHHHHHHHHHhc-CCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccch
Confidence 3443444444433332 1223999999999999999998874 5789999999874321 111111 11
Q ss_pred ----------h-HHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEE--EcCeEEEEEEeccccCcccc
Q 004314 247 ----------R-EEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLE--YYGRTVGIKIMPVGIHMGQI 313 (761)
Q Consensus 247 ----------r-~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~--~~gr~~~i~v~P~GId~~~f 313 (761)
. .-+..++..||.|...+..+++..++.- .| . +++ ...+..++.++|+|||.+.|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~---~~------~---gl~~~~~~~~~ki~~I~NGid~~~~ 257 (476)
T cd03791 190 FHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE---FG------E---GLDGLLRARAGKLSGILNGIDYDVW 257 (476)
T ss_pred hhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC---CC------c---chHHHHHhccCCeEEEeCCCcCccc
Confidence 0 1222345677877777777766553210 00 0 000 01123578899999999988
Q ss_pred hhhhccc-----------hHHHHHHHHHHHc-----CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEE
Q 004314 314 ESVLRLA-----------DKDWRVQELKQQF-----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQI 377 (761)
Q Consensus 314 ~~~~~~~-----------~~~~~~~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 377 (761)
.+..... ........+++++ +++++|+++||+.+.||+..+++|++++.+++ +.|+++
T Consensus 258 ~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~ 331 (476)
T cd03791 258 NPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVIL 331 (476)
T ss_pred CccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEE
Confidence 7642210 0112334566666 46789999999999999999999999987643 447777
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeec
Q 004314 378 ANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (761)
Q Consensus 378 ~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 457 (761)
|. |+ .++++++.+++.+.. ..|+++.+ .+.+++..+|+.||++++||..||||++.+|||+||.
T Consensus 332 G~-----g~--~~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~ 395 (476)
T cd03791 332 GS-----GD--PEYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGT 395 (476)
T ss_pred ec-----CC--HHHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCC
Confidence 73 22 234456666655431 14666654 4577788999999999999999999999999999976
Q ss_pred CCCCCCCCCCCCCCCCceEEEcCCCCCcccc-c--------CcEEECCCCHHHHHHHHHHHHcCCH--HHHHHHHHHHhh
Q 004314 458 GVSGSESSSESSAPKKSMLVVSEFIGCSPSL-S--------GAIRVNPWNIEATAEAMHEAIQMNE--AEKQLRHEKHYR 526 (761)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m~~--~er~~r~~~~~~ 526 (761)
|+|+|..+|..+.+ + +|++++|.|+++++++|.+++.+.. +++..+.++..+
T Consensus 396 -----------------pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~ 458 (476)
T cd03791 396 -----------------VPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA 458 (476)
T ss_pred -----------------CCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc
Confidence 89999999999988 3 5999999999999999999986432 233333333222
Q ss_pred HHhhCCHHHHHHHHHHHH
Q 004314 527 YVSTHDVAYWARSFFQDM 544 (761)
Q Consensus 527 ~v~~~~~~~Wa~~~l~~l 544 (761)
..+++..-++++++-.
T Consensus 459 --~~fsw~~~a~~~~~~y 474 (476)
T cd03791 459 --QDFSWDRSAKEYLELY 474 (476)
T ss_pred --cCCChHHHHHHHHHHH
Confidence 3467777777766543
No 35
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.89 E-value=2.9e-21 Score=214.28 Aligned_cols=285 Identities=15% Similarity=0.119 Sum_probs=204.6
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHh-----cCcchHHH-HHHhhhcCEEeeeCHHHHHHHHHH
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYR-----TLPVREEI-LKALLNADLIGFHTFDYARHFLSC 274 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr-----~lp~r~~i-l~~ll~~DligF~t~~~~~~Fl~~ 274 (761)
.|+||+|++...+.+.+++ +..++|+.+.+|..+|...... .......+ ...+..+|.|.+.+....+.+...
T Consensus 84 ~divh~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLAK-KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHHH-HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 4899999988766655554 4467899999998765321100 00011111 123456888888887766665431
Q ss_pred HhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccCCh
Q 004314 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGV 351 (761)
Q Consensus 275 ~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi 351 (761)
.-+. ...++.++|+|+|.+.+.+.. ...+++++ .++++|+++||+.+.||+
T Consensus 163 ---~~~~---------------~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 ---YPDL---------------DPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred ---cCCC---------------CcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0011 123678899999998876421 12234444 467799999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHH
Q 004314 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (761)
Q Consensus 352 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~ 431 (761)
..+++|++++. +++ .|+++|+ +++..++.+++++.+..++... ..|+++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~~----~l~i~g~-----g~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KDV----QVVLCAG-----APDTPEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hcC----cEEEEeC-----CCCcHHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHH
Confidence 99999999873 333 3666653 2223345566666666554321 24788888999999999999
Q ss_pred hcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCH------HHH
Q 004314 432 IAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNI------EAT 502 (761)
Q Consensus 432 ~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~------~~~ 502 (761)
.||++|+||..||||++.+|||+||. |+|+|..+|..+.+. .|++++|.|. +++
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~G~-----------------PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l 342 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMACGT-----------------PVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAEL 342 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHcCC-----------------CEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHH
Confidence 99999999999999999999999976 999999999888773 4899999998 999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhHH-hhCCHHHHHHHHHHHHHHH
Q 004314 503 AEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMERT 547 (761)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~Wa~~~l~~l~~~ 547 (761)
+++|.++++.+ ++++.+.++.++++ +.+++..+++++++.++++
T Consensus 343 ~~~i~~l~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 343 AKAINILLADP-ELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 99999999854 45666666677776 5689999999988777653
No 36
>PLN00142 sucrose synthase
Probab=99.89 E-value=2.6e-21 Score=227.33 Aligned_cols=333 Identities=13% Similarity=0.152 Sum_probs=208.7
Q ss_pred hHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecC-----------CCch-hHHhc
Q 004314 176 RSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSP-----------FPSS-EIYRT 243 (761)
Q Consensus 176 ~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~P-----------fP~~-e~fr~ 243 (761)
.+.|.--.+++...++.+.......-|+|+-|.+.--+++..|+++. ++|.+++.|+- |... +-|+.
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~ 462 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHF 462 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhh
Confidence 34676666666666666644333123899999777778888888775 68999999942 2111 11111
Q ss_pred C-cchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCc---------eeEEEEcCeEEEEEEeccccCcccc
Q 004314 244 L-PVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRG---------YIGLEYYGRTVGIKIMPVGIHMGQI 313 (761)
Q Consensus 244 l-p~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g---------~~~~~~~gr~~~i~v~P~GId~~~f 313 (761)
. ....|. ..|..||.|.-.|+.-....-..+ + .+++-.+ .-++++.. -++.++|+|+|.+.|
T Consensus 463 ~~r~~aE~-~a~~~Ad~IIasT~qEi~g~~~~i----~-qy~sh~~f~~p~L~rvv~GId~~~--~ki~VVppGvD~~~F 534 (815)
T PLN00142 463 SCQFTADL-IAMNHADFIITSTYQEIAGSKDTV----G-QYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMSIY 534 (815)
T ss_pred hhchHHHH-HHHHhhhHHHhCcHHHHhcccchh----h-hhhcccccccchhhhhhccccccc--cCeeEECCCCChhhc
Confidence 0 011111 145567776655544332110000 0 0000000 00122222 278889999999988
Q ss_pred hhhhccch--------HHHHH---HHHHHHc-----CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEE
Q 004314 314 ESVLRLAD--------KDWRV---QELKQQF-----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQI 377 (761)
Q Consensus 314 ~~~~~~~~--------~~~~~---~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 377 (761)
.+...... ..+.. ...++.+ +++++|++|+|+++.||+..+++||.++.+..++ +.|++|
T Consensus 535 ~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LVIV 610 (815)
T PLN00142 535 FPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLVVV 610 (815)
T ss_pred CCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEEEE
Confidence 75321000 00000 0011112 3577999999999999999999999988666554 448888
Q ss_pred ecCC-CCCchhHHH--HHHHHHHHHHHHhcccCCCCCccEEEEcC---CCCHHHHHHHHH-hcccceecccccCCCcchh
Q 004314 378 ANPA-RGRGKDLEE--IQAEIHATCKRINETFGRPGYEPVVFIDK---PVTLSERAAYYT-IAECVVVTAVRDGMNLTPY 450 (761)
Q Consensus 378 ~~p~-r~~~~~~~~--l~~ev~~lv~~in~~~g~~~~~pV~~~~~---~v~~~el~aly~-~ADv~vvtS~~EGmnLv~~ 450 (761)
|+.. .....+.++ ..+++.+++++.+.. ..|.|++. ..+..++..+|+ ++|+||+||.+||||++++
T Consensus 611 Ggg~d~~~s~d~ee~~el~~L~~La~~lgL~------~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvL 684 (815)
T PLN00142 611 GGFIDPSKSKDREEIAEIKKMHSLIEKYNLK------GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVV 684 (815)
T ss_pred ECCccccccccHHHHHHHHHHHHHHHHcCCC------CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHH
Confidence 8641 111112111 224456666654421 24666542 455678888877 5799999999999999999
Q ss_pred hheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHH
Q 004314 451 EYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQ---MNEAEKQLRHEKH 524 (761)
Q Consensus 451 Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~ 524 (761)
||||||. |+|+|..+|+.+.+. .|++|+|.|++++|++|..+|. ..++.++...++.
T Consensus 685 EAMA~Gl-----------------PVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~A 747 (815)
T PLN00142 685 EAMTCGL-----------------PTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAG 747 (815)
T ss_pred HHHHcCC-----------------CEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 9999986 999999999999883 4999999999999999987763 3344556666667
Q ss_pred hhHH-hhCCHHHHHHHHHHHH
Q 004314 525 YRYV-STHDVAYWARSFFQDM 544 (761)
Q Consensus 525 ~~~v-~~~~~~~Wa~~~l~~l 544 (761)
++++ +.+++...++++++-.
T Consensus 748 r~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 748 LQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHhCCHHHHHHHHHHHH
Confidence 7877 5689888888877644
No 37
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.89 E-value=4.6e-21 Score=212.49 Aligned_cols=284 Identities=21% Similarity=0.223 Sum_probs=202.1
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhH--Hhc---Ccc-hHHH-HHHhhhcCEEeeeCHHHHHHHHHH
Q 004314 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEI--YRT---LPV-REEI-LKALLNADLIGFHTFDYARHFLSC 274 (761)
Q Consensus 202 DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~--fr~---lp~-r~~i-l~~ll~~DligF~t~~~~~~Fl~~ 274 (761)
|+|++|++....++..+.+. .++++.++.|........ ... .+. +..+ ...+..+|.+.+.+......+...
T Consensus 103 Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 181 (398)
T cd03800 103 DLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEELYSL 181 (398)
T ss_pred cEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH
Confidence 89999998877776666554 478899999976432110 000 000 1111 223457999999988776665431
Q ss_pred HhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHH
Q 004314 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354 (761)
Q Consensus 275 ~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~ 354 (761)
.+ ....++.++|+|+|.+.|.+.... ......+. ...++++|+++||+++.||+..+
T Consensus 182 ----~~---------------~~~~~~~vi~ng~~~~~~~~~~~~---~~~~~~~~-~~~~~~~i~~~gr~~~~k~~~~l 238 (398)
T cd03800 182 ----YG---------------AYPRRIRVVPPGVDLERFTPYGRA---EARRARLL-RDPDKPRILAVGRLDPRKGIDTL 238 (398)
T ss_pred ----cc---------------ccccccEEECCCCCccceecccch---hhHHHhhc-cCCCCcEEEEEcccccccCHHHH
Confidence 11 112247889999999888653221 11111111 11467899999999999999999
Q ss_pred HHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcc
Q 004314 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAE 434 (761)
Q Consensus 355 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 434 (761)
++|+..+.+++|+++ |+++|+..... ......++++++++.+.. ..|. +.+.++.+++..+|+.||
T Consensus 239 l~a~~~l~~~~~~~~----l~i~G~~~~~~---~~~~~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~ad 304 (398)
T cd03800 239 IRAYAELPELRERAN----LVIVGGPRDDI---LAMDEEELRELARELGVI------DRVD-FPGRVSREDLPALYRAAD 304 (398)
T ss_pred HHHHHHHHHhCCCeE----EEEEECCCCcc---hhhhhHHHHHHHHhcCCC------ceEE-EeccCCHHHHHHHHHhCC
Confidence 999999988877765 88888543221 122233455555554311 1355 457899999999999999
Q ss_pred cceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHc
Q 004314 435 CVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQ 511 (761)
Q Consensus 435 v~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~ 511 (761)
++++||..||+|++++|||+||. |+|+|+.+|..+.+. .|++++|.|+++++++|.++++
T Consensus 305 i~l~ps~~e~~~~~l~Ea~a~G~-----------------Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~ 367 (398)
T cd03800 305 VFVNPALYEPFGLTALEAMACGL-----------------PVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLT 367 (398)
T ss_pred EEEecccccccCcHHHHHHhcCC-----------------CEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999986 899999999988883 4899999999999999999998
Q ss_pred CCHHHHHHHHHHHhhHH-hhCCHHHHHHHHH
Q 004314 512 MNEAEKQLRHEKHYRYV-STHDVAYWARSFF 541 (761)
Q Consensus 512 m~~~er~~r~~~~~~~v-~~~~~~~Wa~~~l 541 (761)
++ ++++.+.++.++++ +.+++...+++++
T Consensus 368 ~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 368 DP-ALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred CH-HHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 74 45666667778887 7789998888775
No 38
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.89 E-value=2e-21 Score=222.78 Aligned_cols=276 Identities=16% Similarity=0.138 Sum_probs=195.8
Q ss_pred CCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCch---hHHhc---CcchHH--------HHH-HhhhcCEEeee
Q 004314 199 PEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSS---EIYRT---LPVREE--------ILK-ALLNADLIGFH 263 (761)
Q Consensus 199 ~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~---e~fr~---lp~r~~--------il~-~ll~~DligF~ 263 (761)
++.|+||+|+.....++..+.++..+.|+.++.|--++.. +++.. .+..+. +.+ .+..||.|...
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~~ 251 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITTL 251 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEec
Confidence 3569999998765555555545556889999999866532 22211 000011 111 12356666655
Q ss_pred CHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeec
Q 004314 264 TFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVD 343 (761)
Q Consensus 264 t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~Vd 343 (761)
+....+.... .| ....++.++|+|||.+.|.+.... ...+++++|+++|
T Consensus 252 s~~~~~~~~~-----~g---------------~~~~ki~vIpNgid~~~f~~~~~~-----------~~~~~~~~i~~vG 300 (475)
T cd03813 252 YEGNRERQIE-----DG---------------ADPEKIRVIPNGIDPERFAPARRA-----------RPEKEPPVVGLIG 300 (475)
T ss_pred CHHHHHHHHH-----cC---------------CCHHHeEEeCCCcCHHHcCCcccc-----------ccCCCCcEEEEEe
Confidence 4433222110 11 123467889999999988653210 1125678999999
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCH
Q 004314 344 DMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTL 423 (761)
Q Consensus 344 Rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~ 423 (761)
|+.+.||+..+++|+..+.++.|+++ |+++|. +++..++.+++++++++.|.. ..|.|++ .
T Consensus 301 rl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~-----g~~~~~~~~e~~~li~~l~l~------~~V~f~G----~ 361 (475)
T cd03813 301 RVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGP-----TDEDPEYAEECRELVESLGLE------DNVKFTG----F 361 (475)
T ss_pred ccccccCHHHHHHHHHHHHHhCCCeE----EEEECC-----CCcChHHHHHHHHHHHHhCCC------CeEEEcC----C
Confidence 99999999999999999998888765 887773 222235667778888776532 2466654 6
Q ss_pred HHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---------CcEEE
Q 004314 424 SERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---------GAIRV 494 (761)
Q Consensus 424 ~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---------~al~V 494 (761)
+++..+|+.||++|+||..|||+++++||||||. |+|+|+.+|+.+.+. .|+++
T Consensus 362 ~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-----------------PVVatd~g~~~elv~~~~~~~~g~~G~lv 424 (475)
T cd03813 362 QNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-----------------PVVATDVGSCRELIEGADDEALGPAGEVV 424 (475)
T ss_pred ccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-----------------CEEECCCCChHHHhcCCcccccCCceEEE
Confidence 7899999999999999999999999999999986 899999999988873 38999
Q ss_pred CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhh-CCHHHHHHHHHH
Q 004314 495 NPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWARSFFQ 542 (761)
Q Consensus 495 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~Wa~~~l~ 542 (761)
+|.|++++|++|.++++.+ ++++...++.++++.+ +++...+++|.+
T Consensus 425 ~~~d~~~la~ai~~ll~~~-~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 425 PPADPEALARAILRLLKDP-ELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred CCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999999999999864 4566667778888876 466776766654
No 39
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.89 E-value=7.1e-21 Score=210.62 Aligned_cols=231 Identities=13% Similarity=0.112 Sum_probs=171.7
Q ss_pred hcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc--
Q 004314 256 NADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-- 333 (761)
Q Consensus 256 ~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-- 333 (761)
.+|.+...+....+.+... .+. ...++.++|+|||.+.|.+.... . ....++.+
T Consensus 136 ~~~~~i~vs~~~~~~~~~~----~~~---------------~~~~~~vi~ngvd~~~~~~~~~~---~--~~~~~~~~~~ 191 (374)
T TIGR03088 136 LIHHYVAVSRDLEDWLRGP----VKV---------------PPAKIHQIYNGVDTERFHPSRGD---R--SPILPPDFFA 191 (374)
T ss_pred cCCeEEEeCHHHHHHHHHh----cCC---------------ChhhEEEeccCccccccCCCccc---h--hhhhHhhcCC
Confidence 3677777777666555321 121 22467789999999888643211 1 11112222
Q ss_pred CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~p 413 (761)
.++.+|+++||+++.||+..+++|+..+++++|+...++.|+++|. |+.. +++++.+++.+ ...
T Consensus 192 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~-----g~~~----~~~~~~~~~~~-------~~~ 255 (374)
T TIGR03088 192 DESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGD-----GPAR----GACEQMVRAAG-------LAH 255 (374)
T ss_pred CCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecC-----CchH----HHHHHHHHHcC-------Ccc
Confidence 4678999999999999999999999999999887655678998873 3333 33444444433 223
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---C
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---G 490 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 490 (761)
.+++.+. .+++..+|+.||++|+||..||||++++|||+||. |+|+|+.+|..+.+. .
T Consensus 256 ~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~-----------------Pvv~s~~~g~~e~i~~~~~ 316 (374)
T TIGR03088 256 LVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASGL-----------------PVIATAVGGNPELVQHGVT 316 (374)
T ss_pred eEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcCC-----------------CEEEcCCCCcHHHhcCCCc
Confidence 4455553 67899999999999999999999999999999986 999999999998883 3
Q ss_pred cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHH-hhCCHHHHHHHHHHHHHH
Q 004314 491 AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMER 546 (761)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~Wa~~~l~~l~~ 546 (761)
|++++|.|++++|++|.++++.+ +++..+.++.++++ ..+++...++++++-.++
T Consensus 317 g~~~~~~d~~~la~~i~~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 317 GALVPPGDAVALARALQPYVSDP-AARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred eEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 89999999999999999999854 45666667788887 578988888888776554
No 40
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.88 E-value=1e-20 Score=206.24 Aligned_cols=280 Identities=17% Similarity=0.208 Sum_probs=198.9
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHh-hhcCEEeeeCHHHHHH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL-LNADLIGFHTFDYARH 270 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~l-l~~DligF~t~~~~~~ 270 (761)
++++..+| |+||+|.+|..++..+++...+..++....|...+..-+ +..+.+.. ..++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 34455566 899999999888888887776777888888865332111 11111111 1245555555555555
Q ss_pred HHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccc
Q 004314 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDI 347 (761)
Q Consensus 271 Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~ 347 (761)
|+... + -...++.++|+|+|...|.+.. .....+++++ +++++++++||+.+
T Consensus 145 ~~~~~----~---------------~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIASK----A---------------FNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhcc----C---------------CCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 54310 0 0123678899999988875421 1123455555 46789999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHH
Q 004314 348 FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERA 427 (761)
Q Consensus 348 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~ 427 (761)
.||+..+++|+.++.+++|+++ |+++|. +++.++ +.+.+.+.|.. ..|.++ ++ .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~----~~~~~~~~~~~------~~v~~~-g~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRAT----LERLIKALGLS------NRVKLL-GL--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHHH----HHHHHHhcCCC------CcEEEe-cc--cccHH
Confidence 9999999999999998888765 887773 343333 34444443311 136655 43 46899
Q ss_pred HHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-CcEEECCCCHHHHHHHH
Q 004314 428 AYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAM 506 (761)
Q Consensus 428 aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai 506 (761)
.+|+.||++++||..||||++++|||+||. |+|+|+.+|..+.+. +++.++|.|++++|++|
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-----------------PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i 320 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMACEL-----------------PVVATDAGGVREVVGDSGLIVPISDPEALANKI 320 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHcCC-----------------CEEEecCCChhhEecCCceEeCCCCHHHHHHHH
Confidence 999999999999999999999999999976 899999998888885 58999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhH-HhhCCHHHHHHHHHHHH
Q 004314 507 HEAIQMNEAEKQLRHEKHYRY-VSTHDVAYWARSFFQDM 544 (761)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~-v~~~~~~~Wa~~~l~~l 544 (761)
.+++++++..+..+.++ +++ .+.+++..+++++++-.
T Consensus 321 ~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 321 DEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHh
Confidence 99998777666665555 444 46789999999887654
No 41
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.87 E-value=1.7e-20 Score=205.94 Aligned_cols=274 Identities=16% Similarity=0.111 Sum_probs=193.5
Q ss_pred HHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCC----CchhHHhcCcchHHHHHH-hhhcCEEeeeCHHH
Q 004314 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPF----PSSEIYRTLPVREEILKA-LLNADLIGFHTFDY 267 (761)
Q Consensus 193 i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~Pf----P~~e~fr~lp~r~~il~~-ll~~DligF~t~~~ 267 (761)
+++..+| |+||+|+.+..+....+.++ .++|+.+.+|... +.............+.+. +..+|.+.+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLARR-LGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHHH-cCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 4455566 89999977644443333333 4688888888432 111111000011122222 34679998888766
Q ss_pred HHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccc
Q 004314 268 ARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDI 347 (761)
Q Consensus 268 ~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~ 347 (761)
.+.+... |. ...++.++|+|+|.+.|.+... -.+++.++++||+.+
T Consensus 154 ~~~~~~~-----~~---------------~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLAL-----GF---------------PPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHHc-----CC---------------CHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeecc
Confidence 5555421 21 2235778999999988764210 134568999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHH
Q 004314 348 FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERA 427 (761)
Q Consensus 348 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~ 427 (761)
.||+..+++|+..+.+++|+++ |+++|. ++. .+++++++++.+.. ..|. +.+.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~----~~~~~~~~~~~~~~------~~v~-~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPL----LAALEALARALGLG------GRVT-FLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chH----HHHHHHHHHHcCCC------CeEE-ECCCCCHHHHH
Confidence 9999999999999988888765 888873 332 23455555553211 1355 45689999999
Q ss_pred HHHHhcccceeccc------ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCC
Q 004314 428 AYYTIAECVVVTAV------RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWN 498 (761)
Q Consensus 428 aly~~ADv~vvtS~------~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d 498 (761)
.+|+.||++|+||. .||||++++|||+||. |+|+|+.+|..+.+. .|++++|.|
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~-----------------PvI~s~~~~~~e~i~~~~~g~~~~~~d 322 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV-----------------PVVATRHGGIPEAVEDGETGLLVPEGD 322 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC-----------------CEEEeCCCCchhheecCCeeEEECCCC
Confidence 99999999999997 5999999999999976 999999999988773 489999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHH
Q 004314 499 IEATAEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFF 541 (761)
Q Consensus 499 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l 541 (761)
+++++++|.++++.+ +.+.....+.++++. .+++..+++.+.
T Consensus 323 ~~~l~~~i~~l~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 323 VAALAAALGRLLADP-DLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 999999999999864 356666667788874 688888888764
No 42
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.87 E-value=4.1e-20 Score=201.58 Aligned_cols=268 Identities=20% Similarity=0.234 Sum_probs=194.2
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHH
Q 004314 195 EVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSC 274 (761)
Q Consensus 195 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~ 274 (761)
+..+| |+|++|..+...+..++.+. .++|+.+.+|-.++.... ...+ +..+|.+.+.+....+.+.
T Consensus 75 ~~~~~--dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~------~~~~---~~~~~~vi~~s~~~~~~~~-- 140 (355)
T cd03819 75 REEKV--DIVHARSRAPAWSAYLAARR-TRPPFVTTVHGFYSVNFR------YNAI---MARGDRVIAVSNFIADHIR-- 140 (355)
T ss_pred HHcCC--CEEEECCCchhHHHHHHHHh-cCCCEEEEeCCchhhHHH------HHHH---HHhcCEEEEeCHHHHHHHH--
Confidence 33455 89999997766555554443 478999999987654321 1222 3468988887765555443
Q ss_pred HhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccCCh
Q 004314 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGV 351 (761)
Q Consensus 275 ~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi 351 (761)
...+. ...++.++|+|||...|.+.... ......+++++ .++++++++||+...||+
T Consensus 141 --~~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~ 200 (355)
T cd03819 141 --ENYGV---------------DPDRIRVIPRGVDLDRFDPGAVP---PERILALAREWPLPKGKPVILLPGRLTRWKGQ 200 (355)
T ss_pred --HhcCC---------------ChhhEEEecCCccccccCccccc---hHHHHHHHHHcCCCCCceEEEEeeccccccCH
Confidence 11221 22367889999999988653221 11122245555 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHH
Q 004314 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (761)
Q Consensus 352 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~ 431 (761)
..+++|+..+.+++++++ |+++|.. +..+.+.+++.+.+.+.+.. ..|.+++ . .+++..+|+
T Consensus 201 ~~li~~~~~l~~~~~~~~----l~ivG~~-----~~~~~~~~~~~~~~~~~~~~------~~v~~~g-~--~~~~~~~l~ 262 (355)
T cd03819 201 EVFIEALARLKKDDPDVH----LLIVGDA-----QGRRFYYAELLELIKRLGLQ------DRVTFVG-H--CSDMPAAYA 262 (355)
T ss_pred HHHHHHHHHHHhcCCCeE----EEEEECC-----cccchHHHHHHHHHHHcCCc------ceEEEcC-C--cccHHHHHH
Confidence 999999999988766655 8888843 22234445555555543311 1366654 4 778999999
Q ss_pred hcccceecc-cccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHH
Q 004314 432 IAECVVVTA-VRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMH 507 (761)
Q Consensus 432 ~ADv~vvtS-~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~ 507 (761)
.||++++|| ..||||++.+|||+||. |+|+|..+|..+.+. .|++++|.|+++++++|.
T Consensus 263 ~ad~~i~ps~~~e~~~~~l~EA~a~G~-----------------PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~ 325 (355)
T cd03819 263 LADIVVSASTEPEAFGRTAVEAQAMGR-----------------PVIASDHGGARETVRPGETGLLVPPGDAEALAQALD 325 (355)
T ss_pred hCCEEEecCCCCCCCchHHHHHHhcCC-----------------CEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHH
Confidence 999999999 78999999999999986 899999988888773 489999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhhHHhhC
Q 004314 508 EAIQMNEAEKQLRHEKHYRYVSTH 531 (761)
Q Consensus 508 ~aL~m~~~er~~r~~~~~~~v~~~ 531 (761)
.++...+++++...+++++++.++
T Consensus 326 ~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 326 QILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred HHHhhCHHHHHHHHHHHHHHHHHh
Confidence 888877888888888888888764
No 43
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.86 E-value=2.9e-20 Score=209.78 Aligned_cols=273 Identities=17% Similarity=0.130 Sum_probs=183.9
Q ss_pred CCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcC-------------cchH--HH-----------H
Q 004314 198 NPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTL-------------PVRE--EI-----------L 251 (761)
Q Consensus 198 ~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~l-------------p~r~--~i-----------l 251 (761)
+| |+|..|--+...+ .+.+.++++|+++.+|-|.-+++.+..+ ..+. .+ +
T Consensus 107 ~p--Dv~i~~~g~~~~~--~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~ 182 (419)
T cd03806 107 VP--DIFIDTMGYPFTY--PLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFL 182 (419)
T ss_pred CC--CEEEEcCCcccHH--HHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHH
Confidence 56 6555443233323 3556677899999999554344444221 1101 01 1
Q ss_pred H--HhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHH
Q 004314 252 K--ALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQEL 329 (761)
Q Consensus 252 ~--~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~l 329 (761)
. .+-.||.|-..+....++|.+ ..+ ...++.++|+|+|++.|.+...
T Consensus 183 ~~~~~~~aD~ii~~S~~~~~~~~~----~~~----------------~~~~~~vi~~gvd~~~~~~~~~----------- 231 (419)
T cd03806 183 YGLAGSFADVVMVNSTWTRNHIRS----LWK----------------RNTKPSIVYPPCDVEELLKLPL----------- 231 (419)
T ss_pred HHHHhhcCCEEEECCHHHHHHHHH----HhC----------------cCCCcEEEcCCCCHHHhccccc-----------
Confidence 1 134678877777655555432 111 1125778899999987753210
Q ss_pred HHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCc-CceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 004314 330 KQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQ-GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGR 408 (761)
Q Consensus 330 r~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~ 408 (761)
....++.+|++++|+.+.||+...|+||.++.+++|+.. .++.|+++|... ..+..++.+++++++++.+..
T Consensus 232 -~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~---~~~~~~~~~~L~~~~~~l~l~--- 304 (419)
T cd03806 232 -DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCR---NEDDEKRVEDLKLLAKELGLE--- 304 (419)
T ss_pred -ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCC---CcccHHHHHHHHHHHHHhCCC---
Confidence 012456799999999999999999999999999887621 246688888532 112234566777777765522
Q ss_pred CCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcc-c
Q 004314 409 PGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSP-S 487 (761)
Q Consensus 409 ~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~-~ 487 (761)
..|+|+ +.++.+++..+|+.||++|.||..||||++++||||||. |+|+|..+|..+ .
T Consensus 305 ---~~V~f~-g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~-----------------pvIa~~~ggp~~~i 363 (419)
T cd03806 305 ---DKVEFV-VNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGL-----------------IPLAHASGGPLLDI 363 (419)
T ss_pred ---CeEEEe-cCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCC-----------------cEEEEcCCCCchhe
Confidence 146655 589999999999999999999999999999999999976 899998888654 3
Q ss_pred cc------CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHH
Q 004314 488 LS------GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAY 535 (761)
Q Consensus 488 l~------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 535 (761)
+. .|++++ |++++|++|.+++++++.+++.+.+..++...+++...
T Consensus 364 v~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 415 (419)
T cd03806 364 VVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEE 415 (419)
T ss_pred eeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHH
Confidence 43 378874 99999999999999987666554444444445555443
No 44
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.86 E-value=1e-19 Score=200.05 Aligned_cols=286 Identities=14% Similarity=0.164 Sum_probs=197.1
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcC---CCeEEEEEecCCCchhHHhcCcchH-HHHHHhhhcCEEee
Q 004314 187 KIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFT---RLRMGFFLHSPFPSSEIYRTLPVRE-EILKALLNADLIGF 262 (761)
Q Consensus 187 ~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~---~~~ig~flH~PfP~~e~fr~lp~r~-~il~~ll~~DligF 262 (761)
+.+.+.+ +..+| |+|++|.+....++..+..+.. +.++.+.+|..-.. .....+... -+...+..+|.|.+
T Consensus 74 ~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~ 148 (371)
T cd04962 74 SKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTA 148 (371)
T ss_pred HHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEE
Confidence 3444444 44455 8999998765555555544322 67888888853111 011112122 22334567999999
Q ss_pred eCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEE
Q 004314 263 HTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVL 339 (761)
Q Consensus 263 ~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vi 339 (761)
.+....+.+... .+ ...++.++|+|+|...|.+... ...++++ .+++++
T Consensus 149 ~s~~~~~~~~~~----~~----------------~~~~i~vi~n~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i 200 (371)
T cd04962 149 VSESLRQETYEL----FD----------------ITKEIEVIPNFVDEDRFRPKPD--------EALKRRLGAPEGEKVL 200 (371)
T ss_pred cCHHHHHHHHHh----cC----------------CcCCEEEecCCcCHhhcCCCch--------HHHHHhcCCCCCCeEE
Confidence 998776665431 11 1125778999999887754211 1223343 468899
Q ss_pred EeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcC
Q 004314 340 LGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDK 419 (761)
Q Consensus 340 l~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~ 419 (761)
++++|+.+.||+..+++|++++.++ +++ .|+++|. +++...+ ++++.+.+. . ..|.+++
T Consensus 201 l~~g~l~~~K~~~~li~a~~~l~~~-~~~----~l~i~G~-----g~~~~~~----~~~~~~~~~----~--~~v~~~g- 259 (371)
T cd04962 201 IHISNFRPVKRIDDVIRIFAKVRKE-VPA----RLLLVGD-----GPERSPA----ERLARELGL----Q--DDVLFLG- 259 (371)
T ss_pred EEecccccccCHHHHHHHHHHHHhc-CCc----eEEEEcC-----CcCHHHH----HHHHHHcCC----C--ceEEEec-
Confidence 9999999999999999999988654 333 3777763 3443333 344444331 1 1366664
Q ss_pred CCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECC
Q 004314 420 PVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNP 496 (761)
Q Consensus 420 ~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP 496 (761)
. .+++..+|+.||++|+||..||||++++|||+||. |+|+|+.+|..+.+. .|++++|
T Consensus 260 ~--~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~-----------------PvI~s~~~~~~e~i~~~~~G~~~~~ 320 (371)
T cd04962 260 K--QDHVEELLSIADLFLLPSEKESFGLAALEAMACGV-----------------PVVASNAGGIPEVVKHGETGFLVDV 320 (371)
T ss_pred C--cccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCC-----------------CEEEeCCCCchhhhcCCCceEEcCC
Confidence 3 45799999999999999999999999999999976 999999999988873 4899999
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhH-HhhCCHHHHHHHHHHHHHH
Q 004314 497 WNIEATAEAMHEAIQMNEAEKQLRHEKHYRY-VSTHDVAYWARSFFQDMER 546 (761)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~Wa~~~l~~l~~ 546 (761)
.|++++|++|.++++.+ +++....++++++ ...+++...++++.+-+++
T Consensus 321 ~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 321 GDVEAMAEYALSLLEDD-ELWQEFSRAARNRAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 99999999999999854 3555556667777 4568888888888766543
No 45
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.86 E-value=8e-21 Score=201.14 Aligned_cols=162 Identities=19% Similarity=0.200 Sum_probs=126.1
Q ss_pred ceeEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecCCc
Q 004314 591 SRAILFDYDGTVMPQT--SINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADE 668 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~~ 668 (761)
+++|++||||||++.. |..+.++++++++|++|++++++.|+|+|||++..+.++++.+ ++.++++||++++..++
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~- 91 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDING- 91 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCC-
Confidence 6899999999999964 3456788999999999998789999999999999999999865 47899999999987644
Q ss_pred ceeecCcCcCcchHHHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCcEEEeCCeE
Q 004314 669 EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFI 748 (761)
Q Consensus 669 ~w~~~~~~~~~~w~~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~V~~G~~~ 748 (761)
.|.. .....+|...+...++.+..+++|+++|.|+.+++|||++++.+ .....++.+.+.+.+. .+.+.+|+.+
T Consensus 92 ~~~~--~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~--~~~~~~l~~~i~~~~~--~~~~~~g~~~ 165 (266)
T PRK10187 92 KTHI--VHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH--EDALLALAQRITQIWP--QLALQPGKCV 165 (266)
T ss_pred Ceee--ccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc--HHHHHHHHHHHHhhCC--ceEEeCCCEE
Confidence 3432 12345666666667777788999999999999999999988321 1222233333333221 3677889999
Q ss_pred EEEEeCCCCcCC
Q 004314 749 VEVKPQVYIQLR 760 (761)
Q Consensus 749 vEV~p~gvnKG~ 760 (761)
+||+|+++|||+
T Consensus 166 lEi~p~g~~Kg~ 177 (266)
T PRK10187 166 VEIKPRGTNKGE 177 (266)
T ss_pred EEeeCCCCCHHH
Confidence 999999999985
No 46
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.86 E-value=5.5e-20 Score=207.76 Aligned_cols=290 Identities=11% Similarity=0.072 Sum_probs=190.6
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeE-EEEEecCCCchhHHhcCcchHHHH----HHhhhcCEEeeeCHH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRM-GFFLHSPFPSSEIYRTLPVREEIL----KALLNADLIGFHTFD 266 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i-g~flH~PfP~~e~fr~lp~r~~il----~~ll~~DligF~t~~ 266 (761)
.++...+| |+||.|++...+++.+..... .+++ ....|. ++... ++.++ +.+..++++.-.+.
T Consensus 274 ~~ir~~rp--DIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~-------~~r~~~~e~~~~~~a~~i~~~sd- 341 (578)
T PRK15490 274 PHLCERKL--DYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVV-------RKRLFKPEYEPLYQALAVVPGVD- 341 (578)
T ss_pred HHHHHcCC--CEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcc-------hhhHHHHHHHHhhhhceeEecch-
Confidence 34455566 899999999877766665543 4555 445675 33211 11111 11233444332222
Q ss_pred HHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc-CCCeEEEeecCc
Q 004314 267 YARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDM 345 (761)
Q Consensus 267 ~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRl 345 (761)
+..+.....+.+.. .+.-...+|.++|+|||++.|.+....+ ......++..+ .+..+|++|+|+
T Consensus 342 ~v~~s~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl 407 (578)
T PRK15490 342 FMSNNHCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRF 407 (578)
T ss_pred hhhccHHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEE
Confidence 33222211111110 0111335788999999999887642111 11122223333 345688899999
Q ss_pred cccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHH
Q 004314 346 DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSE 425 (761)
Q Consensus 346 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~e 425 (761)
...||....++|+.++++++|+++ |+++| +|+.. +++++++++.+.. ..|+|++ . .++
T Consensus 408 ~~~Kg~~~LI~A~a~llk~~pdir----LvIVG-----dG~~~----eeLk~la~elgL~------d~V~FlG-~--~~D 465 (578)
T PRK15490 408 VGDKNPFAWIDFAARYLQHHPATR----FVLVG-----DGDLR----AEAQKRAEQLGIL------ERILFVG-A--SRD 465 (578)
T ss_pred ehhcCHHHHHHHHHHHHhHCCCeE----EEEEe-----CchhH----HHHHHHHHHcCCC------CcEEECC-C--hhh
Confidence 999999999999999999888766 88887 34433 4455555554421 2477664 3 578
Q ss_pred HHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHH
Q 004314 426 RAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEAT 502 (761)
Q Consensus 426 l~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~ 502 (761)
+..+|+.||+||+||.+|||+++++|||+||. |+|+|..+|+.+.+. +|++|+|.|++++
T Consensus 466 v~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl-----------------PVVATdvGG~~EiV~dG~nG~LVp~~D~~aL 528 (578)
T PRK15490 466 VGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV-----------------PVISTPAGGSAECFIEGVSGFILDDAQTVNL 528 (578)
T ss_pred HHHHHHhCCEEEEcccccCccHHHHHHHHhCC-----------------CEEEeCCCCcHHHcccCCcEEEECCCChhhH
Confidence 99999999999999999999999999999986 999999999998873 4999999999999
Q ss_pred HHHHHHHHcCCH--HHHHHHHHHHhhHHh-hCCHHHHHHHHHHHHHH
Q 004314 503 AEAMHEAIQMNE--AEKQLRHEKHYRYVS-THDVAYWARSFFQDMER 546 (761)
Q Consensus 503 A~ai~~aL~m~~--~er~~r~~~~~~~v~-~~~~~~Wa~~~l~~l~~ 546 (761)
++++..+..+.. .++....++.++++. ++++...++.|++.++.
T Consensus 529 a~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 529 DQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 998854433222 233344567788875 58999989888877654
No 47
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.86 E-value=5.8e-20 Score=200.64 Aligned_cols=257 Identities=15% Similarity=0.114 Sum_probs=176.4
Q ss_pred HHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHH-HhhhcCEEeeeCHHHHHHHH
Q 004314 194 IEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILK-ALLNADLIGFHTFDYARHFL 272 (761)
Q Consensus 194 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~-~ll~~DligF~t~~~~~~Fl 272 (761)
.+..++ |+|++|..+...++.++.++.....+.+..|..+...+.+........+.+ .+..+|.+-..+....+.+.
T Consensus 76 ~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~ 153 (358)
T cd03812 76 IKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLF 153 (358)
T ss_pred HhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHH
Confidence 344454 899999988767777766665555567778877654432221111101111 12346776666655444432
Q ss_pred HHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccC
Q 004314 273 SCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFK 349 (761)
Q Consensus 273 ~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~K 349 (761)
.. ....++.++|+|||...+..... ..+ . ++++ .++.+|+++||+++.|
T Consensus 154 ~~---------------------~~~~~~~vi~ngvd~~~~~~~~~---~~~---~-~~~~~~~~~~~~i~~vGr~~~~K 205 (358)
T cd03812 154 GK---------------------VKNKKFKVIPNGIDLEKFIFNEE---IRK---K-RRELGILEDKFVIGHVGRFSEQK 205 (358)
T ss_pred hC---------------------CCcccEEEEeccCcHHHcCCCch---hhh---H-HHHcCCCCCCEEEEEEecccccc
Confidence 10 01236788999999988764321 111 1 2222 5788999999999999
Q ss_pred ChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHH
Q 004314 350 GVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAY 429 (761)
Q Consensus 350 Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~al 429 (761)
|+..+++|+..+.+++|+++ |+++|. ++..+. +++.+++.+. ...|.+++ . .+++..+
T Consensus 206 g~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~----~~~~~~~~~~------~~~v~~~g-~--~~~~~~~ 263 (358)
T cd03812 206 NHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEE----IKKKVKELGL------EDKVIFLG-V--RNDVPEL 263 (358)
T ss_pred ChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHH----HHHHHHhcCC------CCcEEEec-c--cCCHHHH
Confidence 99999999999999998766 888873 443333 3344433321 12466554 3 6789999
Q ss_pred HHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc--CcEEECCCCHHHHHHHHH
Q 004314 430 YTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS--GAIRVNPWNIEATAEAMH 507 (761)
Q Consensus 430 y~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~A~ai~ 507 (761)
|+.||++|+||..||||++++||||||. |+|+|+.+|..+.+. ++++..+.+++++|++|.
T Consensus 264 ~~~adi~v~ps~~E~~~~~~lEAma~G~-----------------PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~ 326 (358)
T cd03812 264 LQAMDVFLFPSLYEGLPLVLIEAQASGL-----------------PCILSDTITKEVDLTDLVKFLSLDESPEIWAEEIL 326 (358)
T ss_pred HHhcCEEEecccccCCCHHHHHHHHhCC-----------------CEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHH
Confidence 9999999999999999999999999976 999999999888884 355666667899999999
Q ss_pred HHHcCCHHHHHH
Q 004314 508 EAIQMNEAEKQL 519 (761)
Q Consensus 508 ~aL~m~~~er~~ 519 (761)
+++++|+..+..
T Consensus 327 ~l~~~~~~~~~~ 338 (358)
T cd03812 327 KLKSEDRRERSS 338 (358)
T ss_pred HHHhCcchhhhh
Confidence 999998754444
No 48
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.86 E-value=2.6e-19 Score=201.25 Aligned_cols=283 Identities=16% Similarity=0.167 Sum_probs=196.8
Q ss_pred CCEEEEeCCccch-HHHHHHHhcCCCeEEEEEecCCCchhHH-hcC--cchH----HHHHH-hhhcCEEeeeCHHHHHHH
Q 004314 201 DDYVWIHDYHLMV-LPTFLRRRFTRLRMGFFLHSPFPSSEIY-RTL--PVRE----EILKA-LLNADLIGFHTFDYARHF 271 (761)
Q Consensus 201 ~DiVwvhDyhl~l-lp~~lr~~~~~~~ig~flH~PfP~~e~f-r~l--p~r~----~il~~-ll~~DligF~t~~~~~~F 271 (761)
.|+||+|...+.. ...++-.+..+.++.+..|--||..-+- ... +... .+.+. +..+|.|.+.+....+.+
T Consensus 107 ~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~ 186 (412)
T PRK10307 107 PDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKA 186 (412)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHH
Confidence 3899999866542 2222223334567887777656532110 001 0001 11122 346899988888777665
Q ss_pred HHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCcccc
Q 004314 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIF 348 (761)
Q Consensus 272 l~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~ 348 (761)
.+ .+. ...++.++|+|||.+.|.+... .....+++++ .++++++++||+.+.
T Consensus 187 ~~-----~~~---------------~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~ 241 (412)
T PRK10307 187 RE-----KGV---------------AAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEK 241 (412)
T ss_pred HH-----cCC---------------CcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCccccc
Confidence 32 121 2346788999999988865321 1123355555 356899999999999
Q ss_pred CChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHH
Q 004314 349 KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAA 428 (761)
Q Consensus 349 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~a 428 (761)
||+..+++|++++ +++|++ .|+++| +|+.. +++++++++.+ ...|+|+ |.++.+++..
T Consensus 242 kg~~~li~a~~~l-~~~~~~----~l~ivG-----~g~~~----~~l~~~~~~~~-------l~~v~f~-G~~~~~~~~~ 299 (412)
T PRK10307 242 QGLELVIDAARRL-RDRPDL----IFVICG-----QGGGK----ARLEKMAQCRG-------LPNVHFL-PLQPYDRLPA 299 (412)
T ss_pred cCHHHHHHHHHHh-ccCCCe----EEEEEC-----CChhH----HHHHHHHHHcC-------CCceEEe-CCCCHHHHHH
Confidence 9999999999876 445654 488877 34443 34455554433 2247765 6899999999
Q ss_pred HHHhcccceecccccCCCcc----hhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCC--cccc-cCcEEECCCCHHH
Q 004314 429 YYTIAECVVVTAVRDGMNLT----PYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC--SPSL-SGAIRVNPWNIEA 501 (761)
Q Consensus 429 ly~~ADv~vvtS~~EGmnLv----~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~l-~~al~VnP~d~~~ 501 (761)
+|+.||++|+||..|+++++ .+|||+||. |+|+|..+|. .+.+ ..|++++|.|+++
T Consensus 300 ~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~-----------------PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~ 362 (412)
T PRK10307 300 LLKMADCHLLPQKAGAADLVLPSKLTNMLASGR-----------------NVVATAEPGTELGQLVEGIGVCVEPESVEA 362 (412)
T ss_pred HHHhcCEeEEeeccCcccccCcHHHHHHHHcCC-----------------CEEEEeCCCchHHHHHhCCcEEeCCCCHHH
Confidence 99999999999999996554 699999976 8999988774 3444 4699999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHHHHHHHHH
Q 004314 502 TAEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQDMERTC 548 (761)
Q Consensus 502 ~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l~~l~~~~ 548 (761)
+|++|.++++++ +++..+.++.++++. .+++...+++|++.+++.-
T Consensus 363 la~~i~~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 363 LVAAIAALARQA-LLRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHhCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 999999998865 466667777888886 5899999999998887653
No 49
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.85 E-value=1.2e-19 Score=201.72 Aligned_cols=281 Identities=15% Similarity=0.144 Sum_probs=188.2
Q ss_pred CCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHH---------HhhhcCEEeeeCHHHHHH
Q 004314 200 EDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILK---------ALLNADLIGFHTFDYARH 270 (761)
Q Consensus 200 ~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~---------~ll~~DligF~t~~~~~~ 270 (761)
..|+|++|+..... + +++.. .+.++.+..|.| .........+...+.+ .+..+|.|...+......
T Consensus 94 ~~Dvi~~~~~~~~~-~-~~~~~-~~~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~ 168 (392)
T cd03805 94 KYDVFIVDQVSACV-P-LLKLF-SPSKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASV 168 (392)
T ss_pred CCCEEEEcCcchHH-H-HHHHh-cCCcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHH
Confidence 35999999866432 2 23332 337899999954 2211110111111111 134578887776654444
Q ss_pred HHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCC
Q 004314 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKG 350 (761)
Q Consensus 271 Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KG 350 (761)
+.. .++. .....+.++|+|||.+.|.+....+ ..+.....+++.+++++||+.+.||
T Consensus 169 ~~~----~~~~--------------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg 225 (392)
T cd03805 169 FKK----TFPS--------------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKN 225 (392)
T ss_pred HHH----Hhcc--------------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCC
Confidence 432 1110 0111235789999998886532110 0111112257789999999999999
Q ss_pred hHHHHHHHHHHHHhC---CCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHH-HhcccCCCCCccEEEEcCCCCHHHH
Q 004314 351 VDLKLLAMEHLLKQH---PKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKR-INETFGRPGYEPVVFIDKPVTLSER 426 (761)
Q Consensus 351 i~~~l~A~~~ll~~~---P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~-in~~~g~~~~~pV~~~~~~v~~~el 426 (761)
+..+++|++++.+++ |+++ |+++|.... ..++..++.+++++++++ .+.. ..|+|+ |.++.+++
T Consensus 226 ~~~ll~a~~~l~~~~~~~~~~~----l~i~G~~~~-~~~~~~~~~~~l~~~~~~~~~l~------~~V~f~-g~~~~~~~ 293 (392)
T cd03805 226 IALAIEAFAILKDKLAEFKNVR----LVIAGGYDP-RVAENVEYLEELQRLAEELLLLE------DQVIFL-PSISDSQK 293 (392)
T ss_pred hHHHHHHHHHHHhhcccccCeE----EEEEcCCCC-CCchhHHHHHHHHHHHHHhcCCC------ceEEEe-CCCChHHH
Confidence 999999999998877 6554 888885321 112233455667777665 3311 246655 68999999
Q ss_pred HHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHH
Q 004314 427 AAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATA 503 (761)
Q Consensus 427 ~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A 503 (761)
..+|+.||++++||..||||++++|||+||. |+|+|+.+|..+.+. .|++++| |++++|
T Consensus 294 ~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~-----------------PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a 355 (392)
T cd03805 294 ELLLSSARALLYTPSNEHFGIVPLEAMYAGK-----------------PVIACNSGGPLETVVDGETGFLCEP-TPEEFA 355 (392)
T ss_pred HHHHhhCeEEEECCCcCCCCchHHHHHHcCC-----------------CEEEECCCCcHHHhccCCceEEeCC-CHHHHH
Confidence 9999999999999999999999999999976 999999999888773 3788877 999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHH
Q 004314 504 EAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARS 539 (761)
Q Consensus 504 ~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~ 539 (761)
++|.++++.++ +++.+.++.++++. .+++...+++
T Consensus 356 ~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 356 EAMLKLANDPD-LADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHhChH-HHHHHHHHHHHHHHHhcCHHHHhhh
Confidence 99999999764 56666677788774 5777776654
No 50
>PLN02949 transferase, transferring glycosyl groups
Probab=99.85 E-value=2.5e-19 Score=203.72 Aligned_cols=315 Identities=15% Similarity=0.140 Sum_probs=211.2
Q ss_pred ccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCc-cchHHHHHHHhcCCCeEE
Q 004314 150 GFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYH-LMVLPTFLRRRFTRLRMG 228 (761)
Q Consensus 150 gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyh-l~llp~~lr~~~~~~~ig 228 (761)
.+-..-.||-||.+.. .-...|.++..+.+ +. |.|||-.-- ..-+| ++| +.+.|++
T Consensus 108 ~~~~~~~~~~~t~~~~--------~~~~~~l~~~~~~~---------~~---p~v~vDt~~~~~~~p-l~~--~~~~~v~ 164 (463)
T PLN02949 108 KWIEEETYPRFTMIGQ--------SLGSVYLAWEALCK---------FT---PLYFFDTSGYAFTYP-LAR--LFGCKVV 164 (463)
T ss_pred cccccccCCceehHHH--------HHHHHHHHHHHHHh---------cC---CCEEEeCCCcccHHH-HHH--hcCCcEE
Confidence 3445566887776532 23566777765432 12 347775322 12223 344 3478999
Q ss_pred EEEecCCCchhHHhcCcch-------------------HH----H---HHH--hhhcCEEeeeCHHHHHHHHHHHhhhcC
Q 004314 229 FFLHSPFPSSEIYRTLPVR-------------------EE----I---LKA--LLNADLIGFHTFDYARHFLSCCSRMLG 280 (761)
Q Consensus 229 ~flH~PfP~~e~fr~lp~r-------------------~~----i---l~~--ll~~DligF~t~~~~~~Fl~~~~r~lg 280 (761)
+.+|.|.-+.+....+-.+ +. . +.. +-.+|.|...+....+++.+ ..+
T Consensus 165 ~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~----~~~ 240 (463)
T PLN02949 165 CYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEA----LWR 240 (463)
T ss_pred EEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHH----HcC
Confidence 9999886565443322000 00 0 111 24568777776655555532 111
Q ss_pred ceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHH
Q 004314 281 LEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360 (761)
Q Consensus 281 ~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 360 (761)
...+++++++|+|.+.+... + . ....+++++++|+|+.+.||+..+|+||.+
T Consensus 241 ----------------~~~~i~vvyp~vd~~~~~~~---~-~--------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~ 292 (463)
T PLN02949 241 ----------------IPERIKRVYPPCDTSGLQAL---P-L--------ERSEDPPYIISVAQFRPEKAHALQLEAFAL 292 (463)
T ss_pred ----------------CCCCeEEEcCCCCHHHcccC---C-c--------cccCCCCEEEEEEeeeccCCHHHHHHHHHH
Confidence 11256778899998766321 0 0 011345789999999999999999999999
Q ss_pred HHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecc
Q 004314 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTA 440 (761)
Q Consensus 361 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 440 (761)
++++.++-..++.|+++|... .++..++.+++++++++.+.. ..|.|+ +.++.+++.++|+.||++|.||
T Consensus 293 l~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~l~L~------~~V~f~-g~v~~~el~~ll~~a~~~v~~s 362 (463)
T PLN02949 293 ALEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKELGLD------GDVEFH-KNVSYRDLVRLLGGAVAGLHSM 362 (463)
T ss_pred HHHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHHcCCC------CcEEEe-CCCCHHHHHHHHHhCcEEEeCC
Confidence 887543211234598888531 122234556677777665421 136665 6899999999999999999999
Q ss_pred cccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcc-ccc------CcEEECCCCHHHHHHHHHHHHcCC
Q 004314 441 VRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSP-SLS------GAIRVNPWNIEATAEAMHEAIQMN 513 (761)
Q Consensus 441 ~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~-~l~------~al~VnP~d~~~~A~ai~~aL~m~ 513 (761)
..||||++++||||||. |+|+|..+|..+ .+. .|++++ |++++|++|.++++++
T Consensus 363 ~~E~FGivvlEAMA~G~-----------------PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~ 423 (463)
T PLN02949 363 IDEHFGISVVEYMAAGA-----------------VPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMR 423 (463)
T ss_pred ccCCCChHHHHHHHcCC-----------------cEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCC
Confidence 99999999999999976 899999888753 332 267764 9999999999999988
Q ss_pred HHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHHH
Q 004314 514 EAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTC 548 (761)
Q Consensus 514 ~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~~ 548 (761)
++++++..++.++.+.+++...-++++++.+....
T Consensus 424 ~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 424 ETERLEIAAAARKRANRFSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 77777777888889999999998888888777543
No 51
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.85 E-value=1e-19 Score=214.12 Aligned_cols=281 Identities=14% Similarity=0.109 Sum_probs=184.1
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEE-EEecCCCc---hhHHhcCcchHHHHHHhhhcCEEee--eCHHHH
Q 004314 195 EVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGF-FLHSPFPS---SEIYRTLPVREEILKALLNADLIGF--HTFDYA 268 (761)
Q Consensus 195 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~-flH~PfP~---~e~fr~lp~r~~il~~ll~~DligF--~t~~~~ 268 (761)
+..+| |||++|++.-.++..+..+. .++|+.+ .+|+ +|. .+.++. ....+.+.+..++.+.+ .+....
T Consensus 397 k~~kp--DIVH~h~~~a~~lg~lAa~~-~gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~ 470 (694)
T PRK15179 397 RSSVP--SVVHIWQDGSIFACALAALL-AGVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAA 470 (694)
T ss_pred HHcCC--cEEEEeCCcHHHHHHHHHHH-cCCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHH
Confidence 33355 89999999987777766654 3566544 4564 221 121110 01112233333443322 233223
Q ss_pred HHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc-CCCeEEEeecCccc
Q 004314 269 RHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDMDI 347 (761)
Q Consensus 269 ~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~ 347 (761)
+.+.. .++ ....+|.++|+|||+..|.+. +........++... .+.++|++|+|+++
T Consensus 471 ~~l~~----~~g---------------~~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~ 528 (694)
T PRK15179 471 HRYAD----WLG---------------VDERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDD 528 (694)
T ss_pred HHHHH----HcC---------------CChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCc
Confidence 33321 112 123478899999999888532 11111112222222 34678999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHH
Q 004314 348 FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERA 427 (761)
Q Consensus 348 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~ 427 (761)
.||+..+++|+.++++++|+++ |+++|. |+.. +++++++++.+.. ..|+|+ |.. +++.
T Consensus 529 ~KG~~~LI~A~a~l~~~~p~~~----LvIvG~-----G~~~----~~L~~l~~~lgL~------~~V~fl-G~~--~dv~ 586 (694)
T PRK15179 529 NKRPFLWVEAAQRFAASHPKVR----FIMVGG-----GPLL----ESVREFAQRLGMG------ERILFT-GLS--RRVG 586 (694)
T ss_pred cCCHHHHHHHHHHHHHHCcCeE----EEEEcc-----Ccch----HHHHHHHHHcCCC------CcEEEc-CCc--chHH
Confidence 9999999999999999999876 888884 3332 4455666554421 135554 554 5799
Q ss_pred HHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCH--HHH
Q 004314 428 AYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNI--EAT 502 (761)
Q Consensus 428 aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~--~~~ 502 (761)
.+|+.||++|+||.+|||+++++|||+||. |+|+|..+|+.+.+. +|++|+|.|. +++
T Consensus 587 ~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~-----------------PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~L 649 (694)
T PRK15179 587 YWLTQFNAFLLLSRFEGLPNVLIEAQFSGV-----------------PVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDV 649 (694)
T ss_pred HHHHhcCEEEeccccccchHHHHHHHHcCC-----------------eEEEECCCChHHHccCCCCEEEeCCCCCChHHH
Confidence 999999999999999999999999999976 999999999998883 4899998875 689
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHHHH
Q 004314 503 AEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQD 543 (761)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l~~ 543 (761)
+++|.+++...... ....++.++++. .+++..-++++++-
T Consensus 650 a~aL~~ll~~l~~~-~~l~~~ar~~a~~~FS~~~~~~~~~~l 690 (694)
T PRK15179 650 AEALARIHDMCAAD-PGIARKAADWASARFSLNQMIASTVRC 690 (694)
T ss_pred HHHHHHHHhChhcc-HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999888754322 233456677764 67877777766553
No 52
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.85 E-value=1.3e-19 Score=197.06 Aligned_cols=272 Identities=19% Similarity=0.182 Sum_probs=196.4
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCch--hHHhc---CcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHh
Q 004314 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSS--EIYRT---LPVREEILKALLNADLIGFHTFDYARHFLSCCS 276 (761)
Q Consensus 202 DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~--e~fr~---lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~ 276 (761)
|+||+|.+..... +..+.++.+.+|..+|.. +.+.. ...+..+...+..+|.+.+.+...++.+.+..
T Consensus 87 Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~- 159 (365)
T cd03809 87 DLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYL- 159 (365)
T ss_pred CeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHh-
Confidence 8999998877665 456889999999765432 11110 11223344456688999998887776665321
Q ss_pred hhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHH
Q 004314 277 RMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLL 356 (761)
Q Consensus 277 r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~ 356 (761)
+. ...++.++|+|+|...+..... +. ........++++|+++||+.+.||+..+++
T Consensus 160 ---~~---------------~~~~~~vi~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~ 215 (365)
T cd03809 160 ---GV---------------PPDKIVVIPLGVDPRFRPPPAE-----AE-VLRALYLLPRPYFLYVGTIEPRKNLERLLE 215 (365)
T ss_pred ---Cc---------------CHHHEEeeccccCccccCCCch-----HH-HHHHhcCCCCCeEEEeCCCccccCHHHHHH
Confidence 11 1235778999999887754211 11 111122357889999999999999999999
Q ss_pred HHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccc
Q 004314 357 AMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECV 436 (761)
Q Consensus 357 A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~ 436 (761)
|+..+.+.+|+.+ |+++|... .........+ .+.+ ....+.+.+.++.+++..+|+.||++
T Consensus 216 ~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~----~~~~-------~~~~v~~~g~~~~~~~~~~~~~~d~~ 276 (365)
T cd03809 216 AFARLPAKGPDPK----LVIVGKRG----WLNEELLARL----RELG-------LGDRVRFLGYVSDEELAALYRGARAF 276 (365)
T ss_pred HHHHHHHhcCCCC----EEEecCCc----cccHHHHHHH----HHcC-------CCCeEEECCCCChhHHHHHHhhhhhh
Confidence 9999998887544 88777432 1222222222 1221 12334456799999999999999999
Q ss_pred eecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-CcEEECCCCHHHHHHHHHHHHcCCHH
Q 004314 437 VVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAMHEAIQMNEA 515 (761)
Q Consensus 437 vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~~aL~m~~~ 515 (761)
++||..||+|++++|||+||. |+|+|+.+|..+.+. +++.++|.|+++++++|.++++.+ +
T Consensus 277 l~ps~~e~~~~~~~Ea~a~G~-----------------pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~ 338 (365)
T cd03809 277 VFPSLYEGFGLPVLEAMACGT-----------------PVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLEDP-A 338 (365)
T ss_pred cccchhccCCCCHHHHhcCCC-----------------cEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcCH-H
Confidence 999999999999999999976 899999988888774 689999999999999999998754 4
Q ss_pred HHHHHHHHHhhHHhhCCHHHHHHHHH
Q 004314 516 EKQLRHEKHYRYVSTHDVAYWARSFF 541 (761)
Q Consensus 516 er~~r~~~~~~~v~~~~~~~Wa~~~l 541 (761)
.+....++.++++.++++..++++++
T Consensus 339 ~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 339 LREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 56666667778889999999998875
No 53
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.85 E-value=3.2e-19 Score=194.05 Aligned_cols=277 Identities=20% Similarity=0.221 Sum_probs=191.9
Q ss_pred CEEEEeCCccch---HHHHHHH--hcCCCeEEEEEecCCCchhHHhcCcchHHHHH-HhhhcCEEeeeCHHHHHHHHHHH
Q 004314 202 DYVWIHDYHLMV---LPTFLRR--RFTRLRMGFFLHSPFPSSEIYRTLPVREEILK-ALLNADLIGFHTFDYARHFLSCC 275 (761)
Q Consensus 202 DiVwvhDyhl~l---lp~~lr~--~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~-~ll~~DligF~t~~~~~~Fl~~~ 275 (761)
|+|++|+.+-.. ....+.. +..+.++.+.+|.+.+.... .....+.+ -+-.+|.|-+.+.+.+++++...
T Consensus 78 dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~----~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 153 (366)
T cd03822 78 DVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPR----PGDRALLRLLLRRADAVIVMSSELLRALLLRA 153 (366)
T ss_pred CEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccc----hhhhHHHHHHHhcCCEEEEeeHHHHHHHHhhc
Confidence 899998733211 1111111 23678999999986222111 11122222 24468999888755555554210
Q ss_pred hhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHH
Q 004314 276 SRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKL 355 (761)
Q Consensus 276 ~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l 355 (761)
...++.++|+|+|...+..... .+. .....++.+++++||+.+.||+..++
T Consensus 154 ---------------------~~~~~~~i~~~~~~~~~~~~~~-------~~~-~~~~~~~~~i~~~G~~~~~K~~~~ll 204 (366)
T cd03822 154 ---------------------YPEKIAVIPHGVPDPPAEPPES-------LKA-LGGLDGRPVLLTFGLLRPYKGLELLL 204 (366)
T ss_pred ---------------------CCCcEEEeCCCCcCcccCCchh-------hHh-hcCCCCCeEEEEEeeccCCCCHHHHH
Confidence 0236788999999877653211 111 11225678999999999999999999
Q ss_pred HHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhccc
Q 004314 356 LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAEC 435 (761)
Q Consensus 356 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 435 (761)
+|++++.+++|+++ |+++|... +.....+.+..+++.+.+.. ..|.++++.++.+++..+|+.||+
T Consensus 205 ~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~~~~~------~~v~~~~~~~~~~~~~~~~~~ad~ 270 (366)
T cd03822 205 EALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAERLGLA------DRVIFINRYLPDEELPELFSAADV 270 (366)
T ss_pred HHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHhcCCC------CcEEEecCcCCHHHHHHHHhhcCE
Confidence 99999998888765 88777421 11111111111223333211 247777666999999999999999
Q ss_pred ceeccccc--CCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc-c--CcEEECCCCHHHHHHHHHHHH
Q 004314 436 VVVTAVRD--GMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-S--GAIRVNPWNIEATAEAMHEAI 510 (761)
Q Consensus 436 ~vvtS~~E--GmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~~~~A~ai~~aL 510 (761)
+++||..| |++++++|||+||. |+|+|+.+| .+.+ . .|+++++.|++++|++|..++
T Consensus 271 ~v~ps~~e~~~~~~~~~Ea~a~G~-----------------PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~ 332 (366)
T cd03822 271 VVLPYRSADQTQSGVLAYAIGFGK-----------------PVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLL 332 (366)
T ss_pred EEecccccccccchHHHHHHHcCC-----------------CEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHH
Confidence 99999999 99999999999986 899999888 6666 2 489999999999999999999
Q ss_pred cCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHH
Q 004314 511 QMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (761)
Q Consensus 511 ~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l 544 (761)
+.++ ++..+.++.++++.++++..+++++.+.+
T Consensus 333 ~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 333 ADPE-LAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred cChH-HHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 9654 55666777889998999999999887654
No 54
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.84 E-value=1.3e-18 Score=196.73 Aligned_cols=346 Identities=14% Similarity=0.157 Sum_probs=203.3
Q ss_pred cccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEE
Q 004314 153 KQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEV-INPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFL 231 (761)
Q Consensus 153 ~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~-~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~fl 231 (761)
+.-||-.|+--. |.....+++..-=+|.. ..|-..+.+. .....|++|.||++.......||++.+.++.+|+.
T Consensus 105 ~~~lW~~~~i~s---~~~~~d~nea~~fgy~~--~~~i~~~~~~~~~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTt 179 (590)
T cd03793 105 KGELWELCGIGS---PEGDRETNDAIIFGFLV--AWFLGEFAEQFDDEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTT 179 (590)
T ss_pred HHHHHHHcCCCC---CCCCCcchHHHHHHHHH--HHHHHHHHhhccCCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEe
Confidence 345798888543 22223444433333421 1122222222 11235999999999999999999888999999999
Q ss_pred ecCCCchhHHhcCcc------------------------hHHHHH--HhhhcCEEeeeCHHHHHHHHHHHhhhcCceeec
Q 004314 232 HSPFPSSEIYRTLPV------------------------REEILK--ALLNADLIGFHTFDYARHFLSCCSRMLGLEYQS 285 (761)
Q Consensus 232 H~PfP~~e~fr~lp~------------------------r~~il~--~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~ 285 (761)
|-. ++-|.+-. .+--++ ....||.+...+..-++. |..
T Consensus 180 HAT----~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~E----~~~-------- 243 (590)
T cd03793 180 HAT----LLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAYE----AEH-------- 243 (590)
T ss_pred ccc----ccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHHH----HHH--------
Confidence 954 33332110 000011 112233333222211111 111
Q ss_pred cCceeEEEEcCeEEEEEEeccccCcccchhhhccc----hHHHHHH-----HHHHHc---CCCeEEEe-ecCccc-cCCh
Q 004314 286 KRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLA----DKDWRVQ-----ELKQQF---EGKTVLLG-VDDMDI-FKGV 351 (761)
Q Consensus 286 ~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~----~~~~~~~-----~lr~~~---~~~~vil~-VdRld~-~KGi 351 (761)
..++...+ |+|+|||++.|.+...-. ...+++. .++.+| .+++++++ +||+++ .||+
T Consensus 244 --------Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGi 314 (590)
T cd03793 244 --------LLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGA 314 (590)
T ss_pred --------HhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCH
Confidence 22333233 899999999987542110 1111222 234444 36788888 799999 9999
Q ss_pred HHHHHHHHHHHHhCCCC-cCceeEEEEecCCCCCc---------hhHHHHHHHHHHHHHHHhcc---------c------
Q 004314 352 DLKLLAMEHLLKQHPKW-QGRAVLVQIANPARGRG---------KDLEEIQAEIHATCKRINET---------F------ 406 (761)
Q Consensus 352 ~~~l~A~~~ll~~~P~~-~~~vvLvqi~~p~r~~~---------~~~~~l~~ev~~lv~~in~~---------~------ 406 (761)
+.+|+|+.+|-..-..- .+..|+..+..|+...+ .-.+++++.+.++..+|+.+ .
T Consensus 315 DvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~ 394 (590)
T cd03793 315 DMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEEL 394 (590)
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhh
Confidence 99999999875421111 11223334445664331 22345566666665555554 1
Q ss_pred -----------------------------------------------CC-CCCccEEEEcCCCC------HHHHHHHHHh
Q 004314 407 -----------------------------------------------GR-PGYEPVVFIDKPVT------LSERAAYYTI 432 (761)
Q Consensus 407 -----------------------------------------------g~-~~~~pV~~~~~~v~------~~el~aly~~ 432 (761)
.. .+-..|+|....++ ..+...+|+.
T Consensus 395 ~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g 474 (590)
T cd03793 395 LDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRG 474 (590)
T ss_pred cchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhh
Confidence 00 12223454433332 2358889999
Q ss_pred cccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCc----cccc----CcEEEC-------CC
Q 004314 433 AECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS----PSLS----GAIRVN-------PW 497 (761)
Q Consensus 433 ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l~----~al~Vn-------P~ 497 (761)
||++|+||.+||||++++||||||. |+|+|..+|.. +.+. .|+.|. +.
T Consensus 475 ~dl~v~PS~yE~fG~~~lEAma~G~-----------------PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e 537 (590)
T cd03793 475 CHLGVFPSYYEPWGYTPAECTVMGI-----------------PSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDE 537 (590)
T ss_pred ceEEEeccccCCCCcHHHHHHHcCC-----------------CEEEccCcchhhhhHHHhccCCCceEEEecCCccchHH
Confidence 9999999999999999999999976 99999999883 4432 378887 56
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHH
Q 004314 498 NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (761)
Q Consensus 498 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~ 545 (761)
+++++|++|.+.++++..++........+....+++.+-+..|++.-.
T Consensus 538 ~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 538 SVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 678899999998877644333333333466667888777777766543
No 55
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.84 E-value=7.4e-19 Score=191.30 Aligned_cols=264 Identities=17% Similarity=0.158 Sum_probs=190.5
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcC
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLG 280 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg 280 (761)
.|+|++|..+...+..++..+....+..+.+|.+-.... +....+-+.+..+|.+...+....+.+.+. .+
T Consensus 80 ~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vi~~s~~~~~~l~~~----~~ 150 (355)
T cd03799 80 IDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-----PDAIDLDEKLARADFVVAISEYNRQQLIRL----LG 150 (355)
T ss_pred CCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-----CchHHHHHHHhhCCEEEECCHHHHHHHHHh----cC
Confidence 389999987665555666665557888888885422111 111223344567999999988777766431 11
Q ss_pred ceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHH
Q 004314 281 LEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360 (761)
Q Consensus 281 ~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 360 (761)
....++.++|+|+|.+.|.+.. .....++..|+++||+.+.||+..+++|+++
T Consensus 151 ---------------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~ 203 (355)
T cd03799 151 ---------------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALAL 203 (355)
T ss_pred ---------------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHH
Confidence 1234678899999988775421 0112456789999999999999999999999
Q ss_pred HHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecc
Q 004314 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTA 440 (761)
Q Consensus 361 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 440 (761)
+.+++|+++ |+++|. ++.. .++.+.+++.+ ..+.+.+.+.++.+++.++|+.||++++||
T Consensus 204 l~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~-------~~~~v~~~g~~~~~~l~~~~~~adi~l~~s 263 (355)
T cd03799 204 LKDRGIDFR----LDIVGD-----GPLR----DELEALIAELG-------LEDRVTLLGAKSQEEVRELLRAADLFVLPS 263 (355)
T ss_pred HhhcCCCeE----EEEEEC-----CccH----HHHHHHHHHcC-------CCCeEEECCcCChHHHHHHHHhCCEEEecc
Confidence 987766654 877773 3332 23444444433 123344567899999999999999999999
Q ss_pred cc------cCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHc
Q 004314 441 VR------DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQ 511 (761)
Q Consensus 441 ~~------EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~ 511 (761)
.. ||||++.+|||+||. |+|+|..+|..+.+. .|++++|.|++++|++|.++++
T Consensus 264 ~~~~~~~~e~~~~~~~Ea~a~G~-----------------Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~ 326 (355)
T cd03799 264 VTAADGDREGLPVVLMEAMAMGL-----------------PVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLD 326 (355)
T ss_pred eecCCCCccCccHHHHHHHHcCC-----------------CEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHh
Confidence 99 999999999999976 899999888777773 4899999999999999999999
Q ss_pred CCHHHHHHHHHHHhhHHh-hCCHHHHHH
Q 004314 512 MNEAEKQLRHEKHYRYVS-THDVAYWAR 538 (761)
Q Consensus 512 m~~~er~~r~~~~~~~v~-~~~~~~Wa~ 538 (761)
+++ ++..+.+..++++. .+++...++
T Consensus 327 ~~~-~~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 327 DPE-LRREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred CHH-HHHHHHHHHHHHHHHhcCHHHHhh
Confidence 764 45555666777775 466665554
No 56
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.84 E-value=6e-19 Score=191.11 Aligned_cols=274 Identities=16% Similarity=0.226 Sum_probs=184.1
Q ss_pred CCEEEEeCCcc-chHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHH------HHHhhhcCEEeeeCHHHHHHHHH
Q 004314 201 DDYVWIHDYHL-MVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEI------LKALLNADLIGFHTFDYARHFLS 273 (761)
Q Consensus 201 ~DiVwvhDyhl-~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~i------l~~ll~~DligF~t~~~~~~Fl~ 273 (761)
.|+|++|+... ...+.....+..+.++.++.|..++..... .-+.+..+ -..+..+|.+.+.+.........
T Consensus 88 ~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~ 166 (375)
T cd03821 88 ADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALP-HKALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR 166 (375)
T ss_pred CCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccc-cchhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh
Confidence 48999998432 222222222235788999999776543210 00111111 11133466776666443332211
Q ss_pred HHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccCC
Q 004314 274 CCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKG 350 (761)
Q Consensus 274 ~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 350 (761)
.+...++.++|+|+|.+.+..... .. . ++.+ .++++++++||+++.||
T Consensus 167 ---------------------~~~~~~~~vi~~~~~~~~~~~~~~---~~----~-~~~~~~~~~~~~i~~~G~~~~~K~ 217 (375)
T cd03821 167 ---------------------LGLKAPIAVIPNGVDIPPFAALPS---RG----R-RRKFPILPDKRIILFLGRLHPKKG 217 (375)
T ss_pred ---------------------hCCcccEEEcCCCcChhccCcchh---hh----h-hhhccCCCCCcEEEEEeCcchhcC
Confidence 112346789999999988864311 10 1 3333 46789999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHH
Q 004314 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (761)
Q Consensus 351 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly 430 (761)
+..+++|+.++.+++|+++ |+++|... ..+ ...++.++.+.+. . ..|. +.+.++.+++..+|
T Consensus 218 ~~~li~a~~~l~~~~~~~~----l~i~G~~~----~~~---~~~~~~~~~~~~~----~--~~v~-~~g~~~~~~~~~~~ 279 (375)
T cd03821 218 LDLLIEAFAKLAERFPDWH----LVIAGPDE----GGY---RAELKQIAAALGL----E--DRVT-FTGMLYGEDKAAAL 279 (375)
T ss_pred HHHHHHHHHHhhhhcCCeE----EEEECCCC----cch---HHHHHHHHHhcCc----c--ceEE-EcCCCChHHHHHHH
Confidence 9999999999998888765 88777421 112 2223333333321 1 1355 45789999999999
Q ss_pred HhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-C-cEEECCCCHHHHHHHHHH
Q 004314 431 TIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G-AIRVNPWNIEATAEAMHE 508 (761)
Q Consensus 431 ~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-al~VnP~d~~~~A~ai~~ 508 (761)
+.||++++||..||||++++|||+||. |+|+|+.+|..+.+. + +++++ .+.++++++|.+
T Consensus 280 ~~adv~v~ps~~e~~~~~~~Eama~G~-----------------PvI~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~ 341 (375)
T cd03821 280 ADADLFVLPSHSENFGIVVAEALACGT-----------------PVVTTDKVPWQELIEYGCGWVVD-DDVDALAAALRR 341 (375)
T ss_pred hhCCEEEeccccCCCCcHHHHHHhcCC-----------------CEEEcCCCCHHHHhhcCceEEeC-CChHHHHHHHHH
Confidence 999999999999999999999999976 999999999888774 3 55554 566999999999
Q ss_pred HHcCCHHHHHHHHHHHhhH-HhhCCHHHHHHHHH
Q 004314 509 AIQMNEAEKQLRHEKHYRY-VSTHDVAYWARSFF 541 (761)
Q Consensus 509 aL~m~~~er~~r~~~~~~~-v~~~~~~~Wa~~~l 541 (761)
+++++ ++++...++.+++ .+.+++..-++.++
T Consensus 342 l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 342 ALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 99987 5667777777887 46677777777654
No 57
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.84 E-value=7.5e-19 Score=189.60 Aligned_cols=280 Identities=16% Similarity=0.170 Sum_probs=193.4
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHh-hhcCEEeeeCHHHHHHHHH
Q 004314 195 EVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL-LNADLIGFHTFDYARHFLS 273 (761)
Q Consensus 195 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~l-l~~DligF~t~~~~~~Fl~ 273 (761)
+..+| |+|++|+++.......+.......++.+..|..++...- ...+....+.+-+ -.+|.+...+......+..
T Consensus 77 ~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 153 (365)
T cd03807 77 RRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLGK-KSTRLVARLRRLLSSFIPLIVANSAAAAEYHQA 153 (365)
T ss_pred HhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCcccccc-hhHhHHHHHHHHhccccCeEEeccHHHHHHHHH
Confidence 33455 899999999877776666654678899999976654210 0001111122222 2456665555544433322
Q ss_pred HHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccCC
Q 004314 274 CCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKG 350 (761)
Q Consensus 274 ~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 350 (761)
. +. ...++.++|+|+|...+.+... ....+++++ .++.+++++||+++.||
T Consensus 154 ----~-~~---------------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~ 207 (365)
T cd03807 154 ----I-GY---------------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKD 207 (365)
T ss_pred ----c-CC---------------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcC
Confidence 0 11 1235678999999987764321 112233444 46788999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHH-HHhcccCCCCCccEEEEcCCCCHHHHHHH
Q 004314 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCK-RINETFGRPGYEPVVFIDKPVTLSERAAY 429 (761)
Q Consensus 351 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~-~in~~~g~~~~~pV~~~~~~v~~~el~al 429 (761)
+..+++|+..+.+++|+++ |+++|.. +.....+ .... ..+ .. ..|.+++ +.+++..+
T Consensus 208 ~~~li~a~~~l~~~~~~~~----l~i~G~~-----~~~~~~~----~~~~~~~~----~~--~~v~~~g---~~~~~~~~ 265 (365)
T cd03807 208 HATLLRAAALLLKKFPNAR----LLLVGDG-----PDRANLE----LLALKELG----LE--DKVILLG---ERSDVPAL 265 (365)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEecCC-----cchhHHH----HHHHHhcC----CC--ceEEEcc---ccccHHHH
Confidence 9999999999988887765 8877742 2222222 2222 222 11 1355543 35689999
Q ss_pred HHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-CcEEECCCCHHHHHHHHHH
Q 004314 430 YTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAMHE 508 (761)
Q Consensus 430 y~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~~ 508 (761)
|+.||++++||..||+|++++|||+||. |+|+|+.+|..+.+. .|+.+++.|+++++++|.+
T Consensus 266 ~~~adi~v~ps~~e~~~~~~~Ea~a~g~-----------------PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~ 328 (365)
T cd03807 266 LNALDVFVLSSLSEGFPNVLLEAMACGL-----------------PVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEA 328 (365)
T ss_pred HHhCCEEEeCCccccCCcHHHHHHhcCC-----------------CEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHH
Confidence 9999999999999999999999999976 899999999888885 5899999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhhHHhh-CCHHHHHHHHHHH
Q 004314 509 AIQMNEAEKQLRHEKHYRYVST-HDVAYWARSFFQD 543 (761)
Q Consensus 509 aL~m~~~er~~r~~~~~~~v~~-~~~~~Wa~~~l~~ 543 (761)
+++++ +++....+++++++.+ +++..-++.|.+-
T Consensus 329 l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 329 LLADP-ALRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHhCh-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99987 4566666777888754 7888888877654
No 58
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.84 E-value=9.6e-19 Score=200.72 Aligned_cols=271 Identities=14% Similarity=0.081 Sum_probs=183.3
Q ss_pred CCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCch-hHHhcC----cchHHHHHHhhhcCEEeeeCHHHHHHHHHH
Q 004314 200 EDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSS-EIYRTL----PVREEILKALLNADLIGFHTFDYARHFLSC 274 (761)
Q Consensus 200 ~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~-e~fr~l----p~r~~il~~ll~~DligF~t~~~~~~Fl~~ 274 (761)
+.|+++++-.+... +. +.+..+.++++.++|.-.-+. ..-... +.-+..++.+-.+|.|...|..-.+.....
T Consensus 211 ~~di~i~dr~~~~~-~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~~~ 288 (500)
T TIGR02918 211 KKDIIILDRSTGIG-QA-VLENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILKNQ 288 (500)
T ss_pred CCCEEEEcCCcccc-hH-HHhcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHHHH
Confidence 45899887655443 33 335567899999999642100 000000 111223344455688877776544443321
Q ss_pred HhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHH
Q 004314 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354 (761)
Q Consensus 275 ~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~ 354 (761)
... +.+...+|.++|+|++...+.+. ....+..|++|||+.+.||+..+
T Consensus 289 ~~~----------------~~~~~~ki~viP~g~~~~~~~~~---------------~~r~~~~il~vGrl~~~Kg~~~l 337 (500)
T TIGR02918 289 FKK----------------YYNIEPRIYTIPVGSLDELQYPE---------------QERKPFSIITASRLAKEKHIDWL 337 (500)
T ss_pred hhh----------------hcCCCCcEEEEcCCCcccccCcc---------------cccCCeEEEEEeccccccCHHHH
Confidence 111 11223467889999875443210 01234689999999999999999
Q ss_pred HHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcc
Q 004314 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAE 434 (761)
Q Consensus 355 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 434 (761)
++|+.++.+++|+++ |+++|. |++. +++++++++.+.. ..|.+. |+. ++..+|+.||
T Consensus 338 i~A~~~l~~~~p~~~----l~i~G~-----G~~~----~~l~~~i~~~~l~------~~V~f~-G~~---~~~~~~~~ad 394 (500)
T TIGR02918 338 VKAVVKAKKSVPELT----FDIYGE-----GGEK----QKLQKIINENQAQ------DYIHLK-GHR---NLSEVYKDYE 394 (500)
T ss_pred HHHHHHHHhhCCCeE----EEEEEC-----chhH----HHHHHHHHHcCCC------CeEEEc-CCC---CHHHHHHhCC
Confidence 999999999999866 888873 4443 4555666554321 136554 443 6888999999
Q ss_pred cceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCC-CCccccc---CcEEECC----CC----HHHH
Q 004314 435 CVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFI-GCSPSLS---GAIRVNP----WN----IEAT 502 (761)
Q Consensus 435 v~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~al~VnP----~d----~~~~ 502 (761)
++|+||..||||++++||||||. |+|+|... |..+.+. +|++|++ .| ++++
T Consensus 395 v~v~pS~~Egfgl~~lEAma~G~-----------------PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~l 457 (500)
T TIGR02918 395 LYLSASTSEGFGLTLMEAVGSGL-----------------GMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITAL 457 (500)
T ss_pred EEEEcCccccccHHHHHHHHhCC-----------------CEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHH
Confidence 99999999999999999999976 99999986 6777773 4899974 34 8899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHH
Q 004314 503 AEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (761)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~ 545 (761)
|++|.++|+ +++++.+.++.++.+++++...-++++.+-++
T Consensus 458 a~~I~~ll~--~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 458 AEKIVEYFN--SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHhC--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 999999994 44566667778888888888777777665554
No 59
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.83 E-value=1.2e-18 Score=196.07 Aligned_cols=272 Identities=14% Similarity=0.104 Sum_probs=190.6
Q ss_pred CCCCCEEEEeCCccc-hHHHHHHHhcCCCeEEEEEecC--CCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHH
Q 004314 198 NPEDDYVWIHDYHLM-VLPTFLRRRFTRLRMGFFLHSP--FPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSC 274 (761)
Q Consensus 198 ~~~~DiVwvhDyhl~-llp~~lr~~~~~~~ig~flH~P--fP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~ 274 (761)
+++.|+++.|-++.. ..-.+++++....++....|-. ++.......++.++.+ +-.+|.|.+.+....+.+...
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~~ 201 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQKR 201 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHHH
Confidence 344567777655543 3334566666666688888853 2111111112222222 347899999888766654321
Q ss_pred HhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHH
Q 004314 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354 (761)
Q Consensus 275 ~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~ 354 (761)
.+ ....++.++|+|++...+.+.. ...++..++++||+.+.||+..+
T Consensus 202 ----~~---------------~~~~ki~vi~~gv~~~~~~~~~--------------~~~~~~~il~~Grl~~~Kg~~~l 248 (407)
T cd04946 202 ----YP---------------AYKEKIKVSYLGVSDPGIISKP--------------SKDDTLRIVSCSYLVPVKRVDLI 248 (407)
T ss_pred ----CC---------------CccccEEEEECCcccccccCCC--------------CCCCCEEEEEeeccccccCHHHH
Confidence 12 1223667899999987664310 11456789999999999999999
Q ss_pred HHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHh--
Q 004314 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI-- 432 (761)
Q Consensus 355 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~-- 432 (761)
++|+.++.+++|+.. +.++.+|. |++.. ++++++++.+ . -..|. +.|.++.+++.++|+.
T Consensus 249 i~a~~~l~~~~p~~~--l~~~iiG~-----g~~~~----~l~~~~~~~~----~--~~~V~-f~G~v~~~e~~~~~~~~~ 310 (407)
T cd04946 249 IKALAALAKARPSIK--IKWTHIGG-----GPLED----TLKELAESKP----E--NISVN-FTGELSNSEVYKLYKENP 310 (407)
T ss_pred HHHHHHHHHhCCCce--EEEEEEeC-----chHHH----HHHHHHHhcC----C--CceEE-EecCCChHHHHHHHhhcC
Confidence 999999999988764 66777763 44433 3444443221 1 11355 4579999999999986
Q ss_pred cccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECC-CCHHHHHHHHHH
Q 004314 433 AECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNP-WNIEATAEAMHE 508 (761)
Q Consensus 433 ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP-~d~~~~A~ai~~ 508 (761)
||+++.||..|||+++++|||+||. |+|+|..+|..+.+. .|++++| .|++++|++|.+
T Consensus 311 ~~v~v~~S~~Eg~p~~llEAma~G~-----------------PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ 373 (407)
T cd04946 311 VDVFVNLSESEGLPVSIMEAMSFGI-----------------PVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSK 373 (407)
T ss_pred CCEEEeCCccccccHHHHHHHHcCC-----------------CEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHH
Confidence 6789999999999999999999986 999999999998884 3688876 489999999999
Q ss_pred HHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHH
Q 004314 509 AIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFF 541 (761)
Q Consensus 509 aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l 541 (761)
+++.+ +++..+.++.++++. ++++..+.++|+
T Consensus 374 ll~~~-~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 374 FIDNE-EEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHhCH-HHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99854 566777777888885 578888887775
No 60
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.83 E-value=2.2e-19 Score=201.54 Aligned_cols=187 Identities=13% Similarity=0.035 Sum_probs=129.5
Q ss_pred EEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecC-c-cccCChHHHHHHHHHHHHhCCCCcCceeEEE
Q 004314 299 VGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDD-M-DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ 376 (761)
Q Consensus 299 ~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdR-l-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 376 (761)
.++.++|+|||++.+...... ...+ .-+++++|++|+| + ++.||+..+++|+.++ .++ +.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~-------~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~~----~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAEL-------PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GDK----IELHT 276 (405)
T ss_pred CCEEEeCCCcCcccccccccc-------cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CCC----eEEEE
Confidence 368889999997543221100 0001 1246788999999 4 4789999999999875 233 55888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeee
Q 004314 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (761)
Q Consensus 377 i~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~ 456 (761)
+|.. +... . ..|.+++...+.+++..+|+.||+||+||..|||++|++||||||
T Consensus 277 vG~g-----~~~~-------------~--------~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G 330 (405)
T PRK10125 277 FGKF-----SPFT-------------A--------GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIG 330 (405)
T ss_pred EcCC-----Cccc-------------c--------cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcC
Confidence 8742 1100 0 125555433467899999999999999999999999999999998
Q ss_pred cCCCCCCCCCCCCCCCCceEEEcCCCCCccccc--CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHH-hhCCH
Q 004314 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS--GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDV 533 (761)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~ 533 (761)
. |||+|+.+|+.+.+. +|++|+|.|++++|+++...+... +.....++.++.+ +.++.
T Consensus 331 ~-----------------PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~fs~ 391 (405)
T PRK10125 331 V-----------------PVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAYSG 391 (405)
T ss_pred C-----------------CEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhCCH
Confidence 6 999999999988774 599999999999998654322210 0000123344444 56888
Q ss_pred HHHHHHHHHHHH
Q 004314 534 AYWARSFFQDME 545 (761)
Q Consensus 534 ~~Wa~~~l~~l~ 545 (761)
...++++++-.+
T Consensus 392 ~~~~~~y~~lY~ 403 (405)
T PRK10125 392 QQMLEEYVNFYQ 403 (405)
T ss_pred HHHHHHHHHHHH
Confidence 888888876543
No 61
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.83 E-value=1.5e-18 Score=186.30 Aligned_cols=283 Identities=21% Similarity=0.189 Sum_probs=201.9
Q ss_pred HHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHh----cCcchHHHHHHhhhcCEEeeeCHHHH
Q 004314 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYR----TLPVREEILKALLNADLIGFHTFDYA 268 (761)
Q Consensus 193 i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr----~lp~r~~il~~ll~~DligF~t~~~~ 268 (761)
+.+..++ |+|++|+++...+.. +..+.++.++.+.+|.+++...... ...........+..+|.+.+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 3344354 899999999887665 4445678999999999887542110 00111122233456799888888776
Q ss_pred HHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCc
Q 004314 269 RHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDM 345 (761)
Q Consensus 269 ~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRl 345 (761)
+.+.+.. .....++.++|+|+|...+.... ...+... .+++.++++||+
T Consensus 157 ~~~~~~~-------------------~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~ 208 (374)
T cd03801 157 EELRELG-------------------GVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRL 208 (374)
T ss_pred HHHHhcC-------------------CCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecch
Confidence 6654310 01124678899999998875421 1111112 467889999999
Q ss_pred cccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHH
Q 004314 346 DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSE 425 (761)
Q Consensus 346 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~e 425 (761)
++.||+..+++|+..+.+++|+++ |+++|. ++.... +.+++.+.+.. ..|.+ .+.++.++
T Consensus 209 ~~~k~~~~~i~~~~~~~~~~~~~~----l~i~G~-----~~~~~~----~~~~~~~~~~~------~~v~~-~g~~~~~~ 268 (374)
T cd03801 209 VPRKGVDLLLEALAKLRKEYPDVR----LVIVGD-----GPLREE----LEALAAELGLG------DRVTF-LGFVPDED 268 (374)
T ss_pred hhhcCHHHHHHHHHHHhhhcCCeE----EEEEeC-----cHHHHH----HHHHHHHhCCC------cceEE-EeccChhh
Confidence 999999999999999988877654 887772 333333 33333333211 23554 56899999
Q ss_pred HHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHH
Q 004314 426 RAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEAT 502 (761)
Q Consensus 426 l~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~ 502 (761)
+..+|+.||++++|+..||++++++|||+||. |+|+|..+|..+.+. .|+++++.|++++
T Consensus 269 ~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-----------------pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l 331 (374)
T cd03801 269 LPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-----------------PVVASDVGGIPEVVEDGETGLLVPPGDPEAL 331 (374)
T ss_pred HHHHHHhcCEEEecchhccccchHHHHHHcCC-----------------cEEEeCCCChhHHhcCCcceEEeCCCCHHHH
Confidence 99999999999999999999999999999976 899999988888884 4899999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHh-hHHhhCCHHHHHHHHHHHH
Q 004314 503 AEAMHEAIQMNEAEKQLRHEKHY-RYVSTHDVAYWARSFFQDM 544 (761)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~-~~v~~~~~~~Wa~~~l~~l 544 (761)
+++|.++++.++ .++...++.+ ...+.+++..+++.+++-+
T Consensus 332 ~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 332 AEAILRLLDDPE-LRRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHHcChH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 999999998764 4445555555 4556789999998877643
No 62
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.83 E-value=1.1e-18 Score=189.31 Aligned_cols=267 Identities=19% Similarity=0.246 Sum_probs=186.3
Q ss_pred HHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchH---------HHH-HHhhhcCEEeee
Q 004314 194 IEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVRE---------EIL-KALLNADLIGFH 263 (761)
Q Consensus 194 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~---------~il-~~ll~~DligF~ 263 (761)
.+..+| |+|++|+...+........+..++++.+.+|.+|+.. ....+... .+. ..+..+|.+.+.
T Consensus 80 ~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~ 155 (374)
T cd03817 80 LKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDY--THYVPLGRLLARAVVRRKLSRRFYNRCDAVIAP 155 (374)
T ss_pred HhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHH--HHHHhcccchhHHHHHHHHHHHHhhhCCEEEec
Confidence 344455 8999998755543333333345789999999887632 22222111 111 223468888887
Q ss_pred CHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEE
Q 004314 264 TFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLL 340 (761)
Q Consensus 264 t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil 340 (761)
+......+.. .+ ...++.++|+|+|...+.+... .. .++.+ .++++|+
T Consensus 156 s~~~~~~~~~-----~~----------------~~~~~~vi~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~~i~ 206 (374)
T cd03817 156 SEKIADLLRE-----YG----------------VKRPIEVIPTGIDLDRFEPVDG----DD----ERRKLGIPEDEPVLL 206 (374)
T ss_pred cHHHHHHHHh-----cC----------------CCCceEEcCCccchhccCccch----hH----HHHhcCCCCCCeEEE
Confidence 7765444321 11 1124788999999988764321 11 12233 4678899
Q ss_pred eecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCC
Q 004314 341 GVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420 (761)
Q Consensus 341 ~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~ 420 (761)
++||+.+.||+..+++|++++.++.|+++ |+++|. ++.. .++.+++++.+.. ..|. +.+.
T Consensus 207 ~~G~~~~~k~~~~l~~~~~~~~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~~~------~~v~-~~g~ 266 (374)
T cd03817 207 YVGRLAKEKNIDFLIRAFARLLKEEPDVK----LVIVGD-----GPER----EELEELARELGLA------DRVI-FTGF 266 (374)
T ss_pred EEeeeecccCHHHHHHHHHHHHHhCCCeE----EEEEeC-----CchH----HHHHHHHHHcCCC------CcEE-Eecc
Confidence 99999999999999999999988766654 887773 3322 3344444443311 1355 4578
Q ss_pred CCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCC
Q 004314 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPW 497 (761)
Q Consensus 421 v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~ 497 (761)
++.+++..+|+.||++++||..||+|++.+|||+||. |+|+|..+|..+.+. +|+++++.
T Consensus 267 ~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~-----------------PvI~~~~~~~~~~i~~~~~g~~~~~~ 329 (374)
T cd03817 267 VPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGL-----------------PVVAVDAPGLPDLVADGENGFLFPPG 329 (374)
T ss_pred CChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCC-----------------cEEEeCCCChhhheecCceeEEeCCC
Confidence 9999999999999999999999999999999999976 899999988888774 48999998
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCC
Q 004314 498 NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHD 532 (761)
Q Consensus 498 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 532 (761)
|. +++++|.+++++++ .++.+.++.++++.+++
T Consensus 330 ~~-~~~~~i~~l~~~~~-~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 330 DE-ALAEALLRLLQDPE-LRRRLSKNAEESAEKFS 362 (374)
T ss_pred CH-HHHHHHHHHHhChH-HHHHHHHHHHHHHHHHH
Confidence 88 99999999999875 34556666777777765
No 63
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.83 E-value=1.6e-18 Score=188.53 Aligned_cols=275 Identities=19% Similarity=0.214 Sum_probs=195.6
Q ss_pred CCEEEEeC-CccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcC-c-------chHHHH-HHhhhcCEEeeeCHHHHHH
Q 004314 201 DDYVWIHD-YHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTL-P-------VREEIL-KALLNADLIGFHTFDYARH 270 (761)
Q Consensus 201 ~DiVwvhD-yhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~l-p-------~r~~il-~~ll~~DligF~t~~~~~~ 270 (761)
-|+|++|. ..+..++....++..+.++.+.+|..||........ . ....+. ..+..+|.+-+.+...++.
T Consensus 100 ~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~ 179 (394)
T cd03794 100 PDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREY 179 (394)
T ss_pred CCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHH
Confidence 38999998 444455555555555889999999988754321111 1 111122 2245689999999888777
Q ss_pred HHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCC
Q 004314 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKG 350 (761)
Q Consensus 271 Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KG 350 (761)
|.. .+ ....++.++|+|+|...+.+.... ...... ....++.+++++||+...||
T Consensus 180 ~~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~i~~~G~~~~~k~ 234 (394)
T cd03794 180 LVR-----RG---------------VPPEKISVIPNGVDLELFKPPPAD----ESLRKE-LGLDDKFVVLYAGNIGRAQG 234 (394)
T ss_pred HHh-----cC---------------CCcCceEEcCCCCCHHHcCCccch----hhhhhc-cCCCCcEEEEEecCcccccC
Confidence 641 11 122367889999998877643211 101111 11257789999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHH
Q 004314 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (761)
Q Consensus 351 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly 430 (761)
+..+++|+.++.+. |+++ |+++|. ++....+++ ++... +...|.+++ .++.+++.++|
T Consensus 235 ~~~l~~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~~----~~~~~-------~~~~v~~~g-~~~~~~~~~~~ 292 (394)
T cd03794 235 LDTLLEAAALLKDR-PDIR----FLIVGD-----GPEKEELKE----LAKAL-------GLDNVTFLG-RVPKEELPELL 292 (394)
T ss_pred HHHHHHHHHHHhhc-CCeE----EEEeCC-----cccHHHHHH----HHHHc-------CCCcEEEeC-CCChHHHHHHH
Confidence 99999999998776 6554 877763 344333332 22211 223577765 89999999999
Q ss_pred HhcccceecccccCC-----CcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHH
Q 004314 431 TIAECVVVTAVRDGM-----NLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEAT 502 (761)
Q Consensus 431 ~~ADv~vvtS~~EGm-----nLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~ 502 (761)
+.||++++||..|++ ++..+|||+||. |+|+|+.+|..+.+. .|+++++.|++++
T Consensus 293 ~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-----------------pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l 355 (394)
T cd03794 293 AAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-----------------PVLASVDGESAELVEEAGAGLVVPPGDPEAL 355 (394)
T ss_pred HhhCeeEEeccCcccccccCchHHHHHHHCCC-----------------cEEEecCCCchhhhccCCcceEeCCCCHHHH
Confidence 999999999999876 556799999976 999999999988884 4899999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHH
Q 004314 503 AEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSF 540 (761)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~ 540 (761)
+++|.++++.+ ++++.+.++.++++. .+++..+++++
T Consensus 356 ~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 356 AAAILELLDDP-EERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHhCh-HHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 99999999654 466677777888887 78988888875
No 64
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.83 E-value=1.5e-18 Score=188.28 Aligned_cols=273 Identities=18% Similarity=0.172 Sum_probs=192.6
Q ss_pred HHhCCCCCEEEEeCCccc-hHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcch----HHHHHH-hhhcCEEeeeCHHHH
Q 004314 195 EVINPEDDYVWIHDYHLM-VLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVR----EEILKA-LLNADLIGFHTFDYA 268 (761)
Q Consensus 195 ~~~~~~~DiVwvhDyhl~-llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r----~~il~~-ll~~DligF~t~~~~ 268 (761)
+..+| |+|++|+.... .+...+.+ ..++++.+++|..||..-........ ..+.+. ...+|.+-+.+....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~ 156 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAAR-RLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLA 156 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHH-HcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHH
Confidence 44566 89999975443 22223333 35788999999888733211111111 122222 346788888777665
Q ss_pred HHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc--CCCeEEEeecCcc
Q 004314 269 RHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDDMD 346 (761)
Q Consensus 269 ~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld 346 (761)
..+.. .. ..++.++|+|+|...|.+.... ...++++ .++++++++||+.
T Consensus 157 ~~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~G~~~ 207 (364)
T cd03814 157 DELRA--------------------RG--FRRVRLWPRGVDTELFHPRRRD-------EALRARLGPPDRPVLLYVGRLA 207 (364)
T ss_pred HHHhc--------------------cC--CCceeecCCCccccccCccccc-------HHHHHHhCCCCCeEEEEEeccc
Confidence 53221 00 1256789999999888643211 1112222 4678899999999
Q ss_pred ccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHH
Q 004314 347 IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSER 426 (761)
Q Consensus 347 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el 426 (761)
+.||+..+++|+.++.++ |+++ |+++|. +++...++ .. ...|.++ +.++.+++
T Consensus 208 ~~k~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~--------~~--------~~~v~~~-g~~~~~~~ 260 (364)
T cd03814 208 PEKNLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE--------AR--------YPNVHFL-GFLDGEEL 260 (364)
T ss_pred cccCHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh--------cc--------CCcEEEE-eccCHHHH
Confidence 999999999999999876 6655 887773 33322222 11 1246655 56899999
Q ss_pred HHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHH
Q 004314 427 AAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATA 503 (761)
Q Consensus 427 ~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A 503 (761)
..+|+.||++++||..||+|++++|||+||. |+|+|+.+|..+.+. .|++++|.|.++++
T Consensus 261 ~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~-----------------PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~ 323 (364)
T cd03814 261 AAAYASADVFVFPSRTETFGLVVLEAMASGL-----------------PVVAPDAGGPADIVTDGENGLLVEPGDAEAFA 323 (364)
T ss_pred HHHHHhCCEEEECcccccCCcHHHHHHHcCC-----------------CEEEcCCCCchhhhcCCcceEEcCCCCHHHHH
Confidence 9999999999999999999999999999976 999999999888884 48999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHH
Q 004314 504 EAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (761)
Q Consensus 504 ~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l 544 (761)
++|.++++.++ ++..+.+..++++.++++..+++++++.+
T Consensus 324 ~~i~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 324 AALAALLADPE-LRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHcCHH-HHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 99999998764 55666677788888899999998887643
No 65
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.83 E-value=2.5e-19 Score=204.27 Aligned_cols=318 Identities=13% Similarity=0.152 Sum_probs=187.6
Q ss_pred eecChhhhhhhhhccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCC-ccchH-
Q 004314 137 AFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDY-HLMVL- 214 (761)
Q Consensus 137 v~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDy-hl~ll- 214 (761)
+|=++++++.|......+=.-+-.--.+.++| ++|....-.. .-+-... +.+...+| |+||+|.. ||-..
T Consensus 379 ~F~~p~eQe~~ir~wl~~r~g~~~~~~i~fYp---g~~~~~~~SI-~p~gdI~--~~L~~f~P--DVVHLatP~~LGw~~ 450 (794)
T PLN02501 379 TFSSPEEQESYIRNWLEERIGFKADFKISFYP---GKFSKERRSI-IPAGDTS--QFIPSKDA--DIAILEEPEHLNWYH 450 (794)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCceEEeec---chhccCCccc-cchHHHH--HHhhccCC--CEEEECCchhhccHH
Confidence 67778888877776653321111000011222 3444322211 1122111 22233345 89999995 45455
Q ss_pred -HHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHH--HhhhcCceeeccCceeE
Q 004314 215 -PTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSC--CSRMLGLEYQSKRGYIG 291 (761)
Q Consensus 215 -p~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~--~~r~lg~~~~~~~g~~~ 291 (761)
+..+.+++. +++..+||.||. +++.... ..++.++ ..++++|+.. |++++.++.... .
T Consensus 451 ~Glr~ArKl~--PVVasyHTny~e--Yl~~y~~--g~L~~~l---------lk~l~~~v~r~hcD~VIaPS~atq-~--- 511 (794)
T PLN02501 451 HGKRWTDKFN--HVVGVVHTNYLE--YIKREKN--GALQAFF---------VKHINNWVTRAYCHKVLRLSAATQ-D--- 511 (794)
T ss_pred HHHHHHHHcC--CeEEEEeCCcHH--HHhHhcc--hhHHHHH---------HHHHHHHHHHhhCCEEEcCCHHHH-H---
Confidence 334444443 688889999985 3332211 1111110 1122333332 666666542221 1
Q ss_pred EEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCC
Q 004314 292 LEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKW 368 (761)
Q Consensus 292 ~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~ 368 (761)
+. + ..|.. .+|||++.|.+.... . .. .++ ...+.+++||||.+.||+..+|+|+..+.++.|++
T Consensus 512 --L~-~-~vI~n-VnGVDte~F~P~~r~---~----~~-r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnv 578 (794)
T PLN02501 512 --LP-K-SVICN-VHGVNPKFLKIGEKV---A----EE-RELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGF 578 (794)
T ss_pred --hc-c-cceee-cccccccccCCcchh---H----HH-HhcCCccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCe
Confidence 11 1 11111 259999999864321 1 11 122 12245889999999999999999999998888875
Q ss_pred cCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcc
Q 004314 369 QGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLT 448 (761)
Q Consensus 369 ~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv 448 (761)
+ |+++| +|++.+++ ++++.+.+ . .|.|+++ .++..++|+.+||||+||.+||||+|
T Consensus 579 r----LvIVG-----DGP~reeL----e~la~eLg-------L-~V~FLG~---~dd~~~lyasaDVFVlPS~sEgFGlV 634 (794)
T PLN02501 579 N----LDVFG-----NGEDAHEV----QRAAKRLD-------L-NLNFLKG---RDHADDSLHGYKVFINPSISDVLCTA 634 (794)
T ss_pred E----EEEEc-----CCccHHHH----HHHHHHcC-------C-EEEecCC---CCCHHHHHHhCCEEEECCCcccchHH
Confidence 5 88887 46665444 44444433 1 2666543 34456899999999999999999999
Q ss_pred hhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc--CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhh
Q 004314 449 PYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS--GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYR 526 (761)
Q Consensus 449 ~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 526 (761)
++||||||. |||+|+..|...... ++++ +.|.++++++|.++|.+++ ++ ..++.
T Consensus 635 lLEAMA~Gl-----------------PVVATd~pG~e~V~~g~nGll--~~D~EafAeAI~~LLsd~~-~r-l~~~a--- 690 (794)
T PLN02501 635 TAEALAMGK-----------------FVVCADHPSNEFFRSFPNCLT--YKTSEDFVAKVKEALANEP-QP-LTPEQ--- 690 (794)
T ss_pred HHHHHHcCC-----------------CEEEecCCCCceEeecCCeEe--cCCHHHHHHHHHHHHhCch-hh-hHHHH---
Confidence 999999986 999999988543222 3443 3789999999999999775 22 22222
Q ss_pred HHhhCCHHHHHHHHHHH
Q 004314 527 YVSTHDVAYWARSFFQD 543 (761)
Q Consensus 527 ~v~~~~~~~Wa~~~l~~ 543 (761)
...+++..-++++++.
T Consensus 691 -~~~~SWeAaadrLle~ 706 (794)
T PLN02501 691 -RYNLSWEAATQRFMEY 706 (794)
T ss_pred -HhhCCHHHHHHHHHHh
Confidence 2366666666666654
No 66
>PHA01633 putative glycosyl transferase group 1
Probab=99.82 E-value=2.3e-19 Score=194.65 Aligned_cols=194 Identities=17% Similarity=0.202 Sum_probs=144.6
Q ss_pred eccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCC
Q 004314 304 MPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARG 383 (761)
Q Consensus 304 ~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~ 383 (761)
+|.|||++.|.+... ...+.++++...+++..++++|+|+++.||+..+++|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 567999999875321 01111222222235677899999999999999999999999999998866677776641
Q ss_pred CchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEc--CCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCC
Q 004314 384 RGKDLEEIQAEIHATCKRINETFGRPGYEPVVFID--KPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSG 461 (761)
Q Consensus 384 ~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~--~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~ 461 (761)
. ++. +.+ .. ..|.|++ +.++.+++.++|+.||+||+||..||||++++||||||.
T Consensus 192 --~-------~~~----~l~----l~--~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~---- 248 (335)
T PHA01633 192 --K-------QFT----QLE----VP--ANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT---- 248 (335)
T ss_pred --H-------HHH----HcC----CC--CcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC----
Confidence 1 111 111 11 1477664 677899999999999999999999999999999999976
Q ss_pred CCCCCCCCCCCCceEEEcCCCCCcccccC---------------------cEEECCCCHHHHHHHHHHHHcCCHHHHHHH
Q 004314 462 SESSSESSAPKKSMLVVSEFIGCSPSLSG---------------------AIRVNPWNIEATAEAMHEAIQMNEAEKQLR 520 (761)
Q Consensus 462 ~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---------------------al~VnP~d~~~~A~ai~~aL~m~~~er~~r 520 (761)
|+|+|..+|..+..++ |+.++++|++++|++|..++.+.+. .+|
T Consensus 249 -------------PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~--~~~ 313 (335)
T PHA01633 249 -------------PVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDR--EER 313 (335)
T ss_pred -------------CEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccCh--hhh
Confidence 8999988877664321 4577889999999999999888643 333
Q ss_pred HHHHhhHHhhCCHHHHHHHHH
Q 004314 521 HEKHYRYVSTHDVAYWARSFF 541 (761)
Q Consensus 521 ~~~~~~~v~~~~~~~Wa~~~l 541 (761)
..+.++..+++|+..-+++++
T Consensus 314 ~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 314 SMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred hHHHHHHHHhcCHHHHHHHhh
Confidence 456678888999888777764
No 67
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.82 E-value=3.1e-18 Score=184.71 Aligned_cols=278 Identities=21% Similarity=0.210 Sum_probs=193.1
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcC
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLG 280 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg 280 (761)
-|+|++|......+......+..+.++.+..|.+++....... ..+......+..+|.+.+.+....+.|.+..
T Consensus 94 ~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~----- 167 (377)
T cd03798 94 PDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG----- 167 (377)
T ss_pred CCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc-----
Confidence 3899999655443333333334457889999987654321111 1222233345678999999987776665310
Q ss_pred ceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHH
Q 004314 281 LEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360 (761)
Q Consensus 281 ~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 360 (761)
....++.++|+|+|...+.+... .....+ ....++..++++||+++.||+..+++|++.
T Consensus 168 ---------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~~ 226 (377)
T cd03798 168 ---------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALAR 226 (377)
T ss_pred ---------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHHHHHHH
Confidence 11236788999999988764321 111111 112467899999999999999999999999
Q ss_pred HHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecc
Q 004314 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTA 440 (761)
Q Consensus 361 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 440 (761)
+.+++|+++ |+++|. +++... +.++++..+ ..+.+.+.+.++.+++..+|+.||++++||
T Consensus 227 ~~~~~~~~~----l~i~g~-----~~~~~~----~~~~~~~~~-------~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~ 286 (377)
T cd03798 227 LLKKRPDVH----LVIVGD-----GPLREA----LEALAAELG-------LEDRVTFLGAVPHEEVPAYYAAADVFVLPS 286 (377)
T ss_pred HHhcCCCeE----EEEEcC-----CcchHH----HHHHHHhcC-------CcceEEEeCCCCHHHHHHHHHhcCeeecch
Confidence 988776654 777663 333323 333333322 123333557899999999999999999999
Q ss_pred cccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHcCCHHHH
Q 004314 441 VRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEK 517 (761)
Q Consensus 441 ~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er 517 (761)
..||+|++++|||+||. |+|+|+.+|..+.+. .|+++++.|+++++++|.++++++..
T Consensus 287 ~~~~~~~~~~Ea~~~G~-----------------pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~-- 347 (377)
T cd03798 287 LREGFGLVLLEAMACGL-----------------PVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL-- 347 (377)
T ss_pred hhccCChHHHHHHhcCC-----------------CEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH--
Confidence 99999999999999976 899999988887773 36899999999999999999998754
Q ss_pred HHHHHHHhh-HHhhCCHHHHHHHHHHHHH
Q 004314 518 QLRHEKHYR-YVSTHDVAYWARSFFQDME 545 (761)
Q Consensus 518 ~~r~~~~~~-~v~~~~~~~Wa~~~l~~l~ 545 (761)
.+..+.++ ....+++..+++.+...++
T Consensus 348 -~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 348 -RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred -HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 33344444 4456788888887776654
No 68
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.81 E-value=1.1e-18 Score=196.23 Aligned_cols=268 Identities=13% Similarity=0.098 Sum_probs=168.7
Q ss_pred HHHHhCCCCCEEEEeCCccc-hH--HHHHHHhcCCCeEEEEEecCCCchhHHhcCc--chHHHHHHhhhcCEEeeeCHHH
Q 004314 193 VIEVINPEDDYVWIHDYHLM-VL--PTFLRRRFTRLRMGFFLHSPFPSSEIYRTLP--VREEILKALLNADLIGFHTFDY 267 (761)
Q Consensus 193 i~~~~~~~~DiVwvhDyhl~-ll--p~~lr~~~~~~~ig~flH~PfP~~e~fr~lp--~r~~il~~ll~~DligF~t~~~ 267 (761)
+++..+| |+|++|+.-.+ .+ ...+++++ .. +..++|+.|+ ++++... .....+...+ ..+
T Consensus 111 ~l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~--~Y~~~~~~g~~~~~l~~~~---------~~~ 175 (462)
T PLN02846 111 TIPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYL--EYVKREKNGRVKAFLLKYI---------NSW 175 (462)
T ss_pred HHHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChH--HHHHHhccchHHHHHHHHH---------HHH
Confidence 3344566 89999995544 43 34455554 34 7778999885 3333211 1112222111 122
Q ss_pred HHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc-C-C--CeEEEeec
Q 004314 268 ARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-E-G--KTVLLGVD 343 (761)
Q Consensus 268 ~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-~-~--~~vil~Vd 343 (761)
++.| .|+.++.++... .+ +.. .+.+.+.|||.+.|.+.... +++.+ + + .+++++||
T Consensus 176 ~~r~--~~d~vi~pS~~~-~~-----l~~---~~i~~v~GVd~~~f~~~~~~---------~~~~~~~~~~~~~~~l~vG 235 (462)
T PLN02846 176 VVDI--YCHKVIRLSAAT-QD-----YPR---SIICNVHGVNPKFLEIGKLK---------LEQQKNGEQAFTKGAYYIG 235 (462)
T ss_pred HHHH--hcCEEEccCHHH-HH-----Hhh---CEEecCceechhhcCCCccc---------HhhhcCCCCCcceEEEEEe
Confidence 2222 144444443211 11 001 12223589999988754211 11222 2 2 35799999
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCH
Q 004314 344 DMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTL 423 (761)
Q Consensus 344 Rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~ 423 (761)
||...||+..+|+||.++.+..|+++ |+++| +|++.+++++ ++.+++ . .++++.+..+.
T Consensus 236 RL~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L~~----~a~~l~-------l-~~~vf~G~~~~ 294 (462)
T PLN02846 236 KMVWSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEVKA----AAEKLE-------L-DVRVYPGRDHA 294 (462)
T ss_pred cCcccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHHHH----HHHhcC-------C-cEEEECCCCCH
Confidence 99999999999999999988888765 88777 5777655544 444433 1 14446665444
Q ss_pred HHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHH
Q 004314 424 SERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIE 500 (761)
Q Consensus 424 ~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~ 500 (761)
+ ++|+.+||||+||..||||+|.+||||||. |+|+++..| .+.+. +++.+ .|.+
T Consensus 295 ~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~-----------------PVVa~~~~~-~~~v~~~~ng~~~--~~~~ 351 (462)
T PLN02846 295 D---PLFHDYKVFLNPSTTDVVCTTTAEALAMGK-----------------IVVCANHPS-NEFFKQFPNCRTY--DDGK 351 (462)
T ss_pred H---HHHHhCCEEEECCCcccchHHHHHHHHcCC-----------------cEEEecCCC-cceeecCCceEec--CCHH
Confidence 3 699999999999999999999999999986 899998876 46662 36666 4899
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHH
Q 004314 501 ATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (761)
Q Consensus 501 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~ 545 (761)
+++++|.++|+.++++...+ . ...+++..=+++|++.++
T Consensus 352 ~~a~ai~~~l~~~~~~~~~~---a---~~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 352 GFVRATLKALAEEPAPLTDA---Q---RHELSWEAATERFLRVAD 390 (462)
T ss_pred HHHHHHHHHHccCchhHHHH---H---HHhCCHHHHHHHHHHHhc
Confidence 99999999998654332211 1 236777777777776654
No 69
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.81 E-value=1.3e-18 Score=192.35 Aligned_cols=277 Identities=17% Similarity=0.090 Sum_probs=187.3
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCC-CchhHHhcCcc---hHHHHHHhhhcCEE
Q 004314 185 ANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPF-PSSEIYRTLPV---REEILKALLNADLI 260 (761)
Q Consensus 185 vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~Pf-P~~e~fr~lp~---r~~il~~ll~~Dli 260 (761)
.-+.|-+.+.. . ...|++.+|..+.... .+.......+...++|... .....-...++ .+.++..+-.+|.|
T Consensus 86 l~~~~l~~l~~-~-~~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 161 (372)
T cd04949 86 LFAFFLDELNK-D-TKPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGV 161 (372)
T ss_pred HHHHHHHHHhc-C-CCCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEE
Confidence 33344444433 1 2358999988776654 2233334556677788532 11100001111 23445556678999
Q ss_pred eeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEE
Q 004314 261 GFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLL 340 (761)
Q Consensus 261 gF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil 340 (761)
.+.+..-.+.+... ++ ...++.++|+|++...+.+.. .....+..++
T Consensus 162 i~~s~~~~~~l~~~----~~----------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~ 208 (372)
T cd04949 162 IVATEQQKQDLQKQ----FG----------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKII 208 (372)
T ss_pred EEccHHHHHHHHHH----hC----------------CCCceEEEcccccChhhcccc-------------hhhcCCCeEE
Confidence 98888766666431 11 111277899999987765321 0113456899
Q ss_pred eecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCC
Q 004314 341 GVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420 (761)
Q Consensus 341 ~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~ 420 (761)
++||+.+.||+..+++|+.++.+++|+++ |+++|. +++...+ ..++.+.+. .+ .|.+ .|
T Consensus 209 ~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~~----~~~~~~~~~----~~--~v~~-~g- 267 (372)
T cd04949 209 TVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGY-----GDEEEKL----KELIEELGL----ED--YVFL-KG- 267 (372)
T ss_pred EEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEe-----CchHHHH----HHHHHHcCC----cc--eEEE-cC-
Confidence 99999999999999999999999999876 887774 3332233 333333321 11 3554 44
Q ss_pred CCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCC-CCccccc---CcEEECC
Q 004314 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFI-GCSPSLS---GAIRVNP 496 (761)
Q Consensus 421 v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~al~VnP 496 (761)
..+++.++|+.||++|+||..||||++.+|||+||. |+|+|+.. |..+.+. +|++++|
T Consensus 268 -~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-----------------PvI~~~~~~g~~~~v~~~~~G~lv~~ 329 (372)
T cd04949 268 -YTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-----------------PVISYDVNYGPSEIIEDGENGYLVPK 329 (372)
T ss_pred -CCCCHHHHHhhhhEEEecccccccChHHHHHHhCCC-----------------CEEEecCCCCcHHHcccCCCceEeCC
Confidence 356799999999999999999999999999999976 89999887 6777763 4899999
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHH
Q 004314 497 WNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWAR 538 (761)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~ 538 (761)
.|++++|++|..+++.+ +.++.+.++.++...++++..+++
T Consensus 330 ~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~ 370 (372)
T cd04949 330 GDIEALAEAIIELLNDP-KLLQKFSEAAYENAERYSEENVWE 370 (372)
T ss_pred CcHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhhHHHHHh
Confidence 99999999999999976 355666667777777777666654
No 70
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.81 E-value=4e-18 Score=182.34 Aligned_cols=259 Identities=16% Similarity=0.139 Sum_probs=177.8
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCc
Q 004314 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGL 281 (761)
Q Consensus 202 DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~ 281 (761)
|+|++|+.+...+...+... ..++.+..|..++...... .+....-..+..+|.+.+.+......+.
T Consensus 85 d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~--------- 151 (348)
T cd03820 85 DVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRALYY--------- 151 (348)
T ss_pred CEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHhh---------
Confidence 89999998822222222221 1478888887765432111 0111122234567888877765541110
Q ss_pred eeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHH
Q 004314 282 EYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHL 361 (761)
Q Consensus 282 ~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~l 361 (761)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+++|++++
T Consensus 152 -------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l 203 (348)
T cd03820 152 -------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKI 203 (348)
T ss_pred -------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHHH
Confidence 0112367889999998765431 124577899999999999999999999999
Q ss_pred HHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceeccc
Q 004314 362 LKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAV 441 (761)
Q Consensus 362 l~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~ 441 (761)
.+.+|+++ |+++|. +++... +.+++.+.+.. ..|. +.+. .+++..+|+.||++++||.
T Consensus 204 ~~~~~~~~----l~i~G~-----~~~~~~----~~~~~~~~~~~------~~v~-~~g~--~~~~~~~~~~ad~~i~ps~ 261 (348)
T cd03820 204 AKKHPDWK----LRIVGD-----GPEREA----LEALIKELGLE------DRVI-LLGF--TKNIEEYYAKASIFVLTSR 261 (348)
T ss_pred HhcCCCeE----EEEEeC-----CCCHHH----HHHHHHHcCCC------CeEE-EcCC--cchHHHHHHhCCEEEeCcc
Confidence 88888765 777773 333323 33344443311 1344 4444 7899999999999999999
Q ss_pred ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc-c---CcEEECCCCHHHHHHHHHHHHcCCHHHH
Q 004314 442 RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-S---GAIRVNPWNIEATAEAMHEAIQMNEAEK 517 (761)
Q Consensus 442 ~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~---~al~VnP~d~~~~A~ai~~aL~m~~~er 517 (761)
.||||++++|||+||. |+|+|+..|..+.+ . .|+++++.|++++|++|.++++.++ .+
T Consensus 262 ~e~~~~~~~Ea~a~G~-----------------Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~-~~ 323 (348)
T cd03820 262 FEGFPMVLLEAMAFGL-----------------PVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEE-LR 323 (348)
T ss_pred ccccCHHHHHHHHcCC-----------------CEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHH-HH
Confidence 9999999999999976 89999876544444 2 5899999999999999999998653 44
Q ss_pred HHHHHHHhhHHhhCCHHHHHHHHH
Q 004314 518 QLRHEKHYRYVSTHDVAYWARSFF 541 (761)
Q Consensus 518 ~~r~~~~~~~v~~~~~~~Wa~~~l 541 (761)
+...++.++.++++++...+++|.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 324 KRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHhc
Confidence 445555677888889888887764
No 71
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.80 E-value=1e-17 Score=181.11 Aligned_cols=262 Identities=18% Similarity=0.173 Sum_probs=178.7
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHF 271 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~F 271 (761)
++++..++ |+|++|.+..+.++.+...+..++++.+++|-.++.. +....+. ...|.+-..+....+.|
T Consensus 90 ~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~------~~~~~~~---~~~d~ii~~s~~~~~~~ 158 (359)
T cd03823 90 RLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLIC------PRQGLFK---KGGDAVIAPSRFLLDRY 158 (359)
T ss_pred HHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeec------chhhhhc---cCCCEEEEeCHHHHHHH
Confidence 34444455 8999998855544333222334689999999765422 1111111 11288888777665555
Q ss_pred HHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCCh
Q 004314 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGV 351 (761)
Q Consensus 272 l~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi 351 (761)
.. .+ ....++.++|+|+|...+..... ....++.+++++||+.+.||+
T Consensus 159 ~~-----~~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~ 206 (359)
T cd03823 159 VA-----NG---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGV 206 (359)
T ss_pred HH-----cC---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCH
Confidence 42 01 01246789999999987754210 112467789999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHH
Q 004314 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (761)
Q Consensus 352 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~ 431 (761)
..+++|+.++.+ ++. .|+++|.. +......... .. -..|. +.+.++.+++..+|+
T Consensus 207 ~~li~~~~~l~~--~~~----~l~i~G~~-----~~~~~~~~~~-----~~--------~~~v~-~~g~~~~~~~~~~~~ 261 (359)
T cd03823 207 DLLLEAFKRLPR--GDI----ELVIVGNG-----LELEEESYEL-----EG--------DPRVE-FLGAYPQEEIDDFYA 261 (359)
T ss_pred HHHHHHHHHHHh--cCc----EEEEEcCc-----hhhhHHHHhh-----cC--------CCeEE-EeCCCCHHHHHHHHH
Confidence 999999999876 544 48877742 2211111111 11 11355 457889999999999
Q ss_pred hcccceeccc-ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHH
Q 004314 432 IAECVVVTAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMH 507 (761)
Q Consensus 432 ~ADv~vvtS~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~ 507 (761)
.||++++||. .||++++++|||+||. |+|+|+.+|..+.+. .|++++|.|+++++++|.
T Consensus 262 ~ad~~i~ps~~~e~~~~~~~Ea~a~G~-----------------Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~ 324 (359)
T cd03823 262 EIDVLVVPSIWPENFPLVIREALAAGV-----------------PVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALE 324 (359)
T ss_pred hCCEEEEcCcccCCCChHHHHHHHCCC-----------------CEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHH
Confidence 9999999997 7999999999999976 899999999888874 489999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHH
Q 004314 508 EAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (761)
Q Consensus 508 ~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~ 542 (761)
++++.+ +.++...++.++.++. ..+++++++
T Consensus 325 ~l~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~ 355 (359)
T cd03823 325 RLIDDP-DLLERLRAGIEPPRSI---EDQAEEYLK 355 (359)
T ss_pred HHHhCh-HHHHHHHHhHHHhhhH---HHHHHHHHH
Confidence 999954 3455555555555543 455554443
No 72
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.80 E-value=3.5e-18 Score=188.73 Aligned_cols=240 Identities=14% Similarity=0.122 Sum_probs=166.6
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhc-CCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRF-TRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARH 270 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~-~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~ 270 (761)
++++..+| |+||+|+.....+..++++.. ...++..+.|..++....+. ...+..+|.+-..+..-.++
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 34444565 899999987766666666543 23455666676554322111 12235688888777665555
Q ss_pred HHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCcc--cc
Q 004314 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMD--IF 348 (761)
Q Consensus 271 Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld--~~ 348 (761)
+.. .++ ...++.++|+|||.+.+.... + ...++++++++||+. ..
T Consensus 148 ~~~-----~~~---------------~~~ki~vi~N~id~~~~~~~~--~-----------~~~~~~~i~~~Grl~~~~~ 194 (359)
T PRK09922 148 MMA-----RGI---------------SAQRISVIYNPVEIKTIIIPP--P-----------ERDKPAVFLYVGRLKFEGQ 194 (359)
T ss_pred HHH-----cCC---------------CHHHEEEEcCCCCHHHccCCC--c-----------ccCCCcEEEEEEEEecccC
Confidence 432 121 112567789999976543211 0 013467899999996 46
Q ss_pred CChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCC--CHHHH
Q 004314 349 KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV--TLSER 426 (761)
Q Consensus 349 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v--~~~el 426 (761)
||+..+++|+.++. + ++.|+++|. |++.+ ++++++++.|.. ..|.|. |.+ +.+++
T Consensus 195 k~~~~l~~a~~~~~---~----~~~l~ivG~-----g~~~~----~l~~~~~~~~l~------~~v~f~-G~~~~~~~~~ 251 (359)
T PRK09922 195 KNVKELFDGLSQTT---G----EWQLHIIGD-----GSDFE----KCKAYSRELGIE------QRIIWH-GWQSQPWEVV 251 (359)
T ss_pred cCHHHHHHHHHhhC---C----CeEEEEEeC-----CccHH----HHHHHHHHcCCC------CeEEEe-cccCCcHHHH
Confidence 99999999998762 2 355888873 44443 345555554321 136655 444 55899
Q ss_pred HHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcC-CCCCccccc---CcEEECCCCHHHH
Q 004314 427 AAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE-FIGCSPSLS---GAIRVNPWNIEAT 502 (761)
Q Consensus 427 ~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l~---~al~VnP~d~~~~ 502 (761)
..+|+.||++|+||..||||++++||||||. |+|+|+ .+|+.+.+. .|++|+|.|++++
T Consensus 252 ~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~-----------------Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~l 314 (359)
T PRK09922 252 QQKIKNVSALLLTSKFEGFPMTLLEAMSYGI-----------------PCISSDCMSGPRDIIKPGLNGELYTPGNIDEF 314 (359)
T ss_pred HHHHhcCcEEEECCcccCcChHHHHHHHcCC-----------------CEEEeCCCCChHHHccCCCceEEECCCCHHHH
Confidence 9999999999999999999999999999986 999999 888888774 4899999999999
Q ss_pred HHHHHHHHcCCH
Q 004314 503 AEAMHEAIQMNE 514 (761)
Q Consensus 503 A~ai~~aL~m~~ 514 (761)
|++|.++++.++
T Consensus 315 a~~i~~l~~~~~ 326 (359)
T PRK09922 315 VGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHhCcc
Confidence 999999999874
No 73
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.80 E-value=7.4e-18 Score=190.01 Aligned_cols=273 Identities=12% Similarity=0.085 Sum_probs=175.7
Q ss_pred CCEEEEeCCccc--hHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcch---HHH---HHH-h-hhcCEEeeeCHHHHHH
Q 004314 201 DDYVWIHDYHLM--VLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVR---EEI---LKA-L-LNADLIGFHTFDYARH 270 (761)
Q Consensus 201 ~DiVwvhDyhl~--llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r---~~i---l~~-l-l~~DligF~t~~~~~~ 270 (761)
.|+|++|..... .+...+-.+..+.|+++.+|.-+++..-.. .+.. ..+ ++. + -.||.|...+....+.
T Consensus 96 ~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~-~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~ 174 (415)
T cd03816 96 ADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALK-LGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKED 174 (415)
T ss_pred CCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcc-cCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHHHH
Confidence 499999985432 222333233457899999997543211000 0100 011 111 1 2467777766654433
Q ss_pred HHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHH---------------Hc--
Q 004314 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQ---------------QF-- 333 (761)
Q Consensus 271 Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~---------------~~-- 333 (761)
+.+ .+ ....+|.++|+| +...|.+... . .....+.+ ..
T Consensus 175 l~~-----~~---------------~~~~ki~vI~Ng-~~~~f~p~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (415)
T cd03816 175 LQQ-----FN---------------NWKIRATVLYDR-PPEQFRPLPL---E-EKHELFLKLAKTFLTRELRIGAVQLSE 229 (415)
T ss_pred HHh-----hh---------------ccCCCeeecCCC-CHHHceeCcH---H-HHHHHHHhccccccccccccccceecC
Confidence 321 11 123467889999 4566654321 1 11111111 01
Q ss_pred CCCeEEEeecCccccCChHHHHHHHHHHHHh------CCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccC
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQ------HPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFG 407 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~------~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g 407 (761)
++..++++++|+.+.||+..+++|+..+.+. +|+ +.|+++| +|+..+ ++++++++.+
T Consensus 230 ~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~----i~l~ivG-----~G~~~~----~l~~~~~~~~---- 292 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPK----LLCIITG-----KGPLKE----KYLERIKELK---- 292 (415)
T ss_pred CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCC----EEEEEEe-----cCccHH----HHHHHHHHcC----
Confidence 2356888999999999999999999998763 344 4488887 344433 4445554433
Q ss_pred CCCCccEEEEcCCCCHHHHHHHHHhcccceec---ccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCC
Q 004314 408 RPGYEPVVFIDKPVTLSERAAYYTIAECVVVT---AVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC 484 (761)
Q Consensus 408 ~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt---S~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~ 484 (761)
...++++.+.++.++++.+|++||++|++ +..+||+++.+||||||. |+|+|..+|+
T Consensus 293 ---l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~-----------------PVI~s~~~~~ 352 (415)
T cd03816 293 ---LKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGL-----------------PVCALDFKCI 352 (415)
T ss_pred ---CCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCC-----------------CEEEeCCCCH
Confidence 23588888889999999999999999864 335889999999999986 8999999998
Q ss_pred ccccc---CcEEECCCCHHHHHHHHHHHHcCC--HHHHHHHHHHHhhHHhhCCHHHHHHHHHH
Q 004314 485 SPSLS---GAIRVNPWNIEATAEAMHEAIQMN--EAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (761)
Q Consensus 485 ~~~l~---~al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~Wa~~~l~ 542 (761)
.+.+. +|++|+ |++++|++|.++++++ +++++.+.++.+++.+ .+|.+.+.+
T Consensus 353 ~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~~ 409 (415)
T cd03816 353 DELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWDR 409 (415)
T ss_pred HHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHHH
Confidence 88883 488884 9999999999999982 5556655556666664 445554443
No 74
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.79 E-value=1.3e-17 Score=179.29 Aligned_cols=275 Identities=17% Similarity=0.155 Sum_probs=191.7
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCc--chHHHHH-HhhhcCEEeeeCHHHHHHH
Q 004314 195 EVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLP--VREEILK-ALLNADLIGFHTFDYARHF 271 (761)
Q Consensus 195 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp--~r~~il~-~ll~~DligF~t~~~~~~F 271 (761)
+..+| |+|++|..+..++..++++.....++.+..|...+.... .... ....+-+ .+-.+|.+.+.+....+.+
T Consensus 77 ~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 153 (359)
T cd03808 77 RKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTS-GGLKRRLYLLLERLALRFTDKVIFQNEDDRDLA 153 (359)
T ss_pred HhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhcc-chhHHHHHHHHHHHHHhhccEEEEcCHHHHHHH
Confidence 33455 899999888777777777656667788887765322110 0000 0011111 2345799999988887776
Q ss_pred HHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCCh
Q 004314 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGV 351 (761)
Q Consensus 272 l~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi 351 (761)
.+. +. ......+.+.|+|+|.+.+..... . ...++.+++++||+.+.||+
T Consensus 154 ~~~-----~~-------------~~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~i~~~G~~~~~k~~ 203 (359)
T cd03808 154 LKL-----GI-------------IKKKKTVLIPGSGVDLDRFSPSPE-----P-------IPEDDPVFLFVARLLKDKGI 203 (359)
T ss_pred HHh-----cC-------------CCcCceEEecCCCCChhhcCcccc-----c-------cCCCCcEEEEEeccccccCH
Confidence 541 10 001235667899999887754211 0 12467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHH
Q 004314 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (761)
Q Consensus 352 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~ 431 (761)
..+++|++.+.+++|+++ |+++|... ........ ++...+. ...|.+++ . .+++..+|+
T Consensus 204 ~~li~~~~~l~~~~~~~~----l~i~G~~~-----~~~~~~~~---~~~~~~~------~~~v~~~g-~--~~~~~~~~~ 262 (359)
T cd03808 204 DELLEAARILKAKGPNVR----LLLVGDGD-----EENPAAIL---EIEKLGL------EGRVEFLG-F--RDDVPELLA 262 (359)
T ss_pred HHHHHHHHHHHhcCCCeE----EEEEcCCC-----cchhhHHH---HHHhcCC------cceEEEee-c--cccHHHHHH
Confidence 999999999988777765 88777432 11111111 1222221 12466654 3 678999999
Q ss_pred hcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHH
Q 004314 432 IAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHE 508 (761)
Q Consensus 432 ~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~ 508 (761)
.||++++||..||||++++|||+||. |+|+|+.+|+.+.+. .|+++++.|+++++++|.+
T Consensus 263 ~adi~i~ps~~e~~~~~~~Ea~~~G~-----------------Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~ 325 (359)
T cd03808 263 AADVFVLPSYREGLPRVLLEAMAMGR-----------------PVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIER 325 (359)
T ss_pred hccEEEecCcccCcchHHHHHHHcCC-----------------CEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHH
Confidence 99999999999999999999999986 899999999988884 3899999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhhH-HhhCCHHHHHHHHH
Q 004314 509 AIQMNEAEKQLRHEKHYRY-VSTHDVAYWARSFF 541 (761)
Q Consensus 509 aL~m~~~er~~r~~~~~~~-v~~~~~~~Wa~~~l 541 (761)
++..++ .+....++.+++ ...+++..+++.++
T Consensus 326 l~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 326 LIEDPE-LRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHhCHH-HHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 887653 455556667777 56788888888765
No 75
>PHA01630 putative group 1 glycosyl transferase
Probab=99.78 E-value=1.3e-17 Score=182.16 Aligned_cols=211 Identities=15% Similarity=0.115 Sum_probs=151.7
Q ss_pred hcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCC
Q 004314 256 NADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEG 335 (761)
Q Consensus 256 ~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~ 335 (761)
.+|.|...+......+.+ .+.. ...++.++|+|||++.|.+... ...+
T Consensus 94 ~ad~ii~~S~~~~~~l~~-----~g~~--------------~~~~i~vIpNGVd~~~f~~~~~-------------~~~~ 141 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYT-----SGLK--------------IPQPIYVIPHNLNPRMFEYKPK-------------EKPH 141 (331)
T ss_pred cCCEEEECCHHHHHHHHH-----cCCC--------------CCCCEEEECCCCCHHHcCCCcc-------------ccCC
Confidence 488888888766666542 1110 0125778999999988864211 0124
Q ss_pred CeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEE
Q 004314 336 KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVV 415 (761)
Q Consensus 336 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~ 415 (761)
+.++++++|+.+.||+..+|+|++++.+++|+++ |+++|. +.. +. + +. .++ +
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~-----~~~--~~--~---l~-~~~------~----- 193 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSS-----NML--DP--R---LF-GLN------G----- 193 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeC-----ccc--ch--h---hc-ccc------c-----
Confidence 5566677889999999999999999988877655 877772 111 11 1 10 011 1
Q ss_pred EEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcE
Q 004314 416 FIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAI 492 (761)
Q Consensus 416 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al 492 (761)
+.+.++.+++..+|+.||+||+||..||||++++||||||. |+|+|..+|..+.+. +|+
T Consensus 194 -~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-----------------PVIas~~gg~~E~i~~~~ng~ 255 (331)
T PHA01630 194 -VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-----------------DVVVTEKGAWSEWVLSNLDVY 255 (331)
T ss_pred -eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCC-----------------CEEEeCCCCchhhccCCCceE
Confidence 12468899999999999999999999999999999999986 999999988888773 244
Q ss_pred E--------------------ECCCCHHHHHHHHHHHHcCC-HHHHHHHHHH-HhhHHhhCCHHHHHHHHHHHHH
Q 004314 493 R--------------------VNPWNIEATAEAMHEAIQMN-EAEKQLRHEK-HYRYVSTHDVAYWARSFFQDME 545 (761)
Q Consensus 493 ~--------------------VnP~d~~~~A~ai~~aL~m~-~~er~~r~~~-~~~~v~~~~~~~Wa~~~l~~l~ 545 (761)
+ ++| |.+++++++.++|..+ +++++.+++. ...+.+++++...++++++-++
T Consensus 256 lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 256 WIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred EeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 4 455 7888999999999875 2345555544 4456678999999999888765
No 76
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.77 E-value=2.9e-17 Score=178.86 Aligned_cols=259 Identities=18% Similarity=0.185 Sum_probs=176.5
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHH-HHHhhhcCEEeeeCHHHHHHHHHHHhhhc
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEI-LKALLNADLIGFHTFDYARHFLSCCSRML 279 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~i-l~~ll~~DligF~t~~~~~~Fl~~~~r~l 279 (761)
.|+|++|+...+.....+... .+.+..+++|........+. .....+ -..+..+|.+.+.+..+.+.+.. +
T Consensus 84 ~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~-----~ 155 (357)
T cd03795 84 ADVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV-----L 155 (357)
T ss_pred CCEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH-----h
Confidence 389999986654322222222 46788888996432211110 111122 22456789988888776655431 1
Q ss_pred CceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHH
Q 004314 280 GLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAME 359 (761)
Q Consensus 280 g~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~ 359 (761)
+ ....++.++|+|+|...+.+... . .........++.+|+++||+.+.||+..+++|++
T Consensus 156 ~---------------~~~~~~~~i~~gi~~~~~~~~~~-----~-~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~ 214 (357)
T cd03795 156 R---------------RFRDKVRVIPLGLDPARYPRPDA-----L-EEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAA 214 (357)
T ss_pred c---------------CCccceEEecCCCChhhcCCcch-----h-hhHhhcCCCCCcEEEEecccccccCHHHHHHHHH
Confidence 1 01136788999999987764211 0 0111111246789999999999999999999998
Q ss_pred HHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceec
Q 004314 360 HLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVT 439 (761)
Q Consensus 360 ~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt 439 (761)
++. ++.|+++|. ++.. .++.+++.+.+. ...|.| .+.++.+++..+|+.||++++|
T Consensus 215 ~l~--------~~~l~i~G~-----g~~~----~~~~~~~~~~~~------~~~V~~-~g~v~~~~~~~~~~~ad~~i~p 270 (357)
T cd03795 215 ALP--------DAPLVIVGE-----GPLE----AELEALAAALGL------LDRVRF-LGRLDDEEKAALLAACDVFVFP 270 (357)
T ss_pred hcc--------CcEEEEEeC-----ChhH----HHHHHHHHhcCC------cceEEE-cCCCCHHHHHHHHHhCCEEEeC
Confidence 864 455887773 3332 334444433321 124665 5799999999999999999999
Q ss_pred cc--ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc----CcEEECCCCHHHHHHHHHHHHcCC
Q 004314 440 AV--RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS----GAIRVNPWNIEATAEAMHEAIQMN 513 (761)
Q Consensus 440 S~--~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~----~al~VnP~d~~~~A~ai~~aL~m~ 513 (761)
|. .||+|++.+|||+||. |+|+|+.+|..+.+. .|++++|.|+++++++|.++++++
T Consensus 271 s~~~~e~~g~~~~Ea~~~g~-----------------Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~ 333 (357)
T cd03795 271 SVERSEAFGIVLLEAMAFGK-----------------PVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDP 333 (357)
T ss_pred CcccccccchHHHHHHHcCC-----------------CEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCH
Confidence 96 5999999999999976 999999998887763 388999999999999999999965
Q ss_pred HHHHHHHHHHHhhHHhh
Q 004314 514 EAEKQLRHEKHYRYVST 530 (761)
Q Consensus 514 ~~er~~r~~~~~~~v~~ 530 (761)
++++.+.++.++++.+
T Consensus 334 -~~~~~~~~~~~~~~~~ 349 (357)
T cd03795 334 -ELRERLGEAARERAEE 349 (357)
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 4566666677777755
No 77
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.77 E-value=6.4e-17 Score=181.16 Aligned_cols=216 Identities=15% Similarity=0.114 Sum_probs=152.4
Q ss_pred hhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc-
Q 004314 255 LNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF- 333 (761)
Q Consensus 255 l~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~- 333 (761)
-.+|.|.+.+....+.+.. ..+ ....++.++|+|||.+.|.+..... ..+
T Consensus 171 ~~ad~vi~~S~~~~~~l~~----~~~---------------~~~~~v~vipngvd~~~f~~~~~~~----------~~~~ 221 (397)
T TIGR03087 171 ARFDAATFVSRAEAELFRR----LAP---------------EAAGRITAFPNGVDADFFSPDRDYP----------NPYP 221 (397)
T ss_pred hhCCeEEEcCHHHHHHHHH----hCC---------------CCCCCeEEeecccchhhcCCCcccc----------CCCC
Confidence 4578887777766655532 101 1123577899999999886532100 112
Q ss_pred CCCeEEEeecCccccCChHHHH----HHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKL----LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP 409 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l----~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~ 409 (761)
.++++|+++||+++.||+..++ .++..+.+++|+++ |++||. +++ .+++++.. .
T Consensus 222 ~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ivG~-----g~~-----~~~~~l~~----~---- 279 (397)
T TIGR03087 222 PGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FYIVGA-----KPS-----PAVRALAA----L---- 279 (397)
T ss_pred CCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EEEECC-----CCh-----HHHHHhcc----C----
Confidence 3567899999999999999887 56667777888876 888873 332 12333321 1
Q ss_pred CCccEEEEcCCCCHHHHHHHHHhcccceeccc-ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc
Q 004314 410 GYEPVVFIDKPVTLSERAAYYTIAECVVVTAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL 488 (761)
Q Consensus 410 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (761)
..|.+. |.++ ++..+|+.||++|+||. .||++++.+||||||. |+|+|..++.....
T Consensus 280 --~~V~~~-G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~-----------------PVV~t~~~~~~i~~ 337 (397)
T TIGR03087 280 --PGVTVT-GSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAK-----------------PVVASPEAAEGIDA 337 (397)
T ss_pred --CCeEEe-eecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcCC-----------------CEEecCcccccccc
Confidence 136654 5665 68999999999999996 6999999999999986 89999864322111
Q ss_pred --cCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHHHHHH
Q 004314 489 --SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQDME 545 (761)
Q Consensus 489 --~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l~~l~ 545 (761)
..++++. .|++++|++|.++++++ +.++.+.++.++++. .+++...++++.+-+.
T Consensus 338 ~~~~g~lv~-~~~~~la~ai~~ll~~~-~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 338 LPGAELLVA-ADPADFAAAILALLANP-AEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred cCCcceEeC-CCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 2378886 89999999999999864 356666777888884 6899998888766553
No 78
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.76 E-value=8.3e-17 Score=174.12 Aligned_cols=240 Identities=16% Similarity=0.100 Sum_probs=162.4
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcC
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLG 280 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg 280 (761)
-|+|++|+....++ + .+..+.++.+++|..++.... .........+.+-+-+....+.+.
T Consensus 88 ~Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~-------- 147 (335)
T cd03802 88 FDIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP-------- 147 (335)
T ss_pred CCEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc--------
Confidence 38999999887766 2 234578899999987643211 122333444444433332221110
Q ss_pred ceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHH
Q 004314 281 LEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360 (761)
Q Consensus 281 ~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 360 (761)
.. .++.++|+|||++.|.+. ..++.+++++||+.+.||+..+++|+.+
T Consensus 148 ---------------~~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~ 195 (335)
T cd03802 148 ---------------PL-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHLAIRAARR 195 (335)
T ss_pred ---------------cc-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHHHHHHHHh
Confidence 00 367789999999888641 1345689999999999999999998754
Q ss_pred HHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecc
Q 004314 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTA 440 (761)
Q Consensus 361 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 440 (761)
+++ .|+++|.. ++...+...+.+... ++ ..|.|. |.++.+++..+|+.||++|+||
T Consensus 196 -----~~~----~l~i~G~~-----~~~~~~~~~~~~~~~-~~--------~~v~~~-G~~~~~~~~~~~~~~d~~v~ps 251 (335)
T cd03802 196 -----AGI----PLKLAGPV-----SDPDYFYREIAPELL-DG--------PDIEYL-GEVGGAEKAELLGNARALLFPI 251 (335)
T ss_pred -----cCC----eEEEEeCC-----CCHHHHHHHHHHhcc-cC--------CcEEEe-CCCCHHHHHHHHHhCcEEEeCC
Confidence 333 48877742 222222222222211 11 136655 6899999999999999999999
Q ss_pred c-ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHcCCHHH
Q 004314 441 V-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAE 516 (761)
Q Consensus 441 ~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~e 516 (761)
. .||||++++||||||. |+|+|+.+|..+.+. +|+++++ +++++++|.+++.++.+
T Consensus 252 ~~~E~~~~~~lEAma~G~-----------------PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~~- 311 (335)
T cd03802 252 LWEEPFGLVMIEAMACGT-----------------PVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDRA- 311 (335)
T ss_pred cccCCcchHHHHHHhcCC-----------------CEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHHH-
Confidence 7 5999999999999976 999999999998884 4889987 99999999998765431
Q ss_pred HHHHHHHHhhHH-hhCCHHHHHHHHHH
Q 004314 517 KQLRHEKHYRYV-STHDVAYWARSFFQ 542 (761)
Q Consensus 517 r~~r~~~~~~~v-~~~~~~~Wa~~~l~ 542 (761)
+.++.+ .++++..-++++++
T Consensus 312 ------~~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 312 ------ACRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred ------HHHHHHHHhCCHHHHHHHHHH
Confidence 122223 45666666666554
No 79
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.75 E-value=1.9e-16 Score=173.16 Aligned_cols=265 Identities=14% Similarity=0.032 Sum_probs=173.8
Q ss_pred CEEEEeCCccc--hHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHH-----HHhhhcCEEeeeCHHHHHHHHHH
Q 004314 202 DYVWIHDYHLM--VLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEIL-----KALLNADLIGFHTFDYARHFLSC 274 (761)
Q Consensus 202 DiVwvhDyhl~--llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il-----~~ll~~DligF~t~~~~~~Fl~~ 274 (761)
|+++||..... .+..++++ .+.++.+.+|..-.....+.. ....++ ..+..+|.|.+.+....+.+..
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~- 160 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLKE- 160 (363)
T ss_pred CeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH-
Confidence 56666654433 33233333 367888888853111111110 111111 1245688888877655544421
Q ss_pred HhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc--CCCeEEEeecCccccCChH
Q 004314 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDDMDIFKGVD 352 (761)
Q Consensus 275 ~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld~~KGi~ 352 (761)
..+ .. . .++|+|+|...+.+. ...++.+ .+++.++++||+.+.||+.
T Consensus 161 ---~~~---------------~~-~--~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~~i~~~G~~~~~Kg~~ 209 (363)
T cd04955 161 ---KYG---------------RD-S--TYIPYGADHVVSSEE----------DEILKKYGLEPGRYYLLVGRIVPENNID 209 (363)
T ss_pred ---hcC---------------CC-C--eeeCCCcChhhcchh----------hhhHHhcCCCCCcEEEEEecccccCCHH
Confidence 111 11 1 679999998776430 1112222 4556788999999999999
Q ss_pred HHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHh
Q 004314 353 LKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI 432 (761)
Q Consensus 353 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ 432 (761)
.+++|+.++.. ++.|+++|... +..++.+.+.+ +. +. ...|++ .+.++.+++..+|+.
T Consensus 210 ~li~a~~~l~~-------~~~l~ivG~~~-----~~~~~~~~~~~---~~----~~--~~~V~~-~g~~~~~~~~~~~~~ 267 (363)
T cd04955 210 DLIEAFSKSNS-------GKKLVIVGNAD-----HNTPYGKLLKE---KA----AA--DPRIIF-VGPIYDQELLELLRY 267 (363)
T ss_pred HHHHHHHhhcc-------CceEEEEcCCC-----CcchHHHHHHH---Hh----CC--CCcEEE-ccccChHHHHHHHHh
Confidence 99999987632 34588888432 22233333332 11 11 123665 578999999999999
Q ss_pred cccceecccc-cCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-CcEEECCCCHHHHHHHHHHHH
Q 004314 433 AECVVVTAVR-DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAMHEAI 510 (761)
Q Consensus 433 ADv~vvtS~~-EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~~aL 510 (761)
||++++||.. ||||++++|||+||. |+|+|..+|..+.+. ++..++|.|. +|++|.+++
T Consensus 268 ad~~v~ps~~~e~~~~~~~EAma~G~-----------------PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~ 328 (363)
T cd04955 268 AALFYLHGHSVGGTNPSLLEAMAYGC-----------------PVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELE 328 (363)
T ss_pred CCEEEeCCccCCCCChHHHHHHHcCC-----------------CEEEecCCccceeecCCeeEecCchH--HHHHHHHHH
Confidence 9999999999 999999999999976 999999998888774 5888888776 999999999
Q ss_pred cCCHHHHHHHHHHHhhHHhh-CCHHHHHHHHHHHH
Q 004314 511 QMNEAEKQLRHEKHYRYVST-HDVAYWARSFFQDM 544 (761)
Q Consensus 511 ~m~~~er~~r~~~~~~~v~~-~~~~~Wa~~~l~~l 544 (761)
++++ .+....++.++++.+ +++..-++++++.+
T Consensus 329 ~~~~-~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 329 ADPE-EVSAMAKAARERIREKYTWEKIADQYEELY 362 (363)
T ss_pred hCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9873 445555666777654 78888777776543
No 80
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.75 E-value=1.3e-16 Score=174.97 Aligned_cols=196 Identities=17% Similarity=0.198 Sum_probs=143.9
Q ss_pred hhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc
Q 004314 254 LLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF 333 (761)
Q Consensus 254 ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~ 333 (761)
+..+|.+...+....+.+... .+ . ...++|+|+|.+.|.+..
T Consensus 151 ~~~~d~ii~~S~~~~~~~~~~----~~----------------~--~~~vi~~~~d~~~~~~~~---------------- 192 (351)
T cd03804 151 AARVDYFIANSRFVARRIKKY----YG----------------R--DATVIYPPVDTDRFTPAE---------------- 192 (351)
T ss_pred hcCCCEEEECCHHHHHHHHHH----hC----------------C--CcEEECCCCCHhhcCcCC----------------
Confidence 457788888877666665321 11 1 235688999988775321
Q ss_pred CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~p 413 (761)
..+++++++||+.+.||+..+++|++++ | ++ |+++|. +++.+++++ .. ...
T Consensus 193 ~~~~~il~~G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-----g~~~~~l~~-------~~--------~~~ 243 (351)
T cd03804 193 EKEDYYLSVGRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-----GPELDRLRA-------KA--------GPN 243 (351)
T ss_pred CCCCEEEEEEcCccccChHHHHHHHHHC----C-Cc----EEEEEC-----ChhHHHHHh-------hc--------CCC
Confidence 2345799999999999999999999865 3 33 777773 444333322 11 124
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---C
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---G 490 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 490 (761)
|.|+ +.++.+++.++|+.||++++||. ||||++++|||+||. |+|+|..+|..+.+. .
T Consensus 244 V~~~-g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~-----------------Pvi~~~~~~~~e~i~~~~~ 304 (351)
T cd03804 244 VTFL-GRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMASGT-----------------PVIAYGKGGALETVIDGVT 304 (351)
T ss_pred EEEe-cCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCC-----------------CEEEeCCCCCcceeeCCCC
Confidence 7765 68999999999999999999999 999999999999976 999999999888773 4
Q ss_pred cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHH
Q 004314 491 AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARS 539 (761)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~ 539 (761)
|++++|.|++++|++|..++++++ + ..+.+++.+.++++.+..++
T Consensus 305 G~~~~~~~~~~la~~i~~l~~~~~-~---~~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 305 GILFEEQTVESLAAAVERFEKNED-F---DPQAIRAHAERFSESRFREK 349 (351)
T ss_pred EEEeCCCCHHHHHHHHHHHHhCcc-c---CHHHHHHHHHhcCHHHHHHH
Confidence 899999999999999999999874 1 12234444555555555443
No 81
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.75 E-value=9.8e-17 Score=171.65 Aligned_cols=245 Identities=22% Similarity=0.192 Sum_probs=167.0
Q ss_pred hCCCCCEEEEeCC-ccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHH
Q 004314 197 INPEDDYVWIHDY-HLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCC 275 (761)
Q Consensus 197 ~~~~~DiVwvhDy-hl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~ 275 (761)
.++ |+|++|++ ...++..+. .+. +.++.+..|..++.... ...+........+..+|.+.+.+....+.+....
T Consensus 80 ~~~--dii~~~~~~~~~~~~~~~-~~~-~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 154 (353)
T cd03811 80 EKP--DVVISHLTTTPNVLALLA-ARL-GTKLIVWEHNSLSLELK-RKLRLLLLIRKLYRRADKIVAVSEGVKEDLLKLL 154 (353)
T ss_pred cCC--CEEEEcCccchhHHHHHH-hhc-CCceEEEEcCcchhhhc-cchhHHHHHHhhccccceEEEeccchhhhHHHhh
Confidence 355 89999998 444444443 333 78999999988764321 1111111223345678888888777666554311
Q ss_pred hhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHH
Q 004314 276 SRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKL 355 (761)
Q Consensus 276 ~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l 355 (761)
+ ....++.++|+|+|...+.+.... . ..+ ....++.+++++||+++.||+..++
T Consensus 155 ----~---------------~~~~~~~vi~~~~~~~~~~~~~~~-----~-~~~-~~~~~~~~i~~~g~~~~~k~~~~~i 208 (353)
T cd03811 155 ----G---------------IPPDKIEVIYNPIDIEEIRALAEE-----P-LEL-GIPPDGPVILAVGRLSPQKGFDTLI 208 (353)
T ss_pred ----c---------------CCccccEEecCCcChhhcCcccch-----h-hhc-CCCCCceEEEEEecchhhcChHHHH
Confidence 1 013467889999999877643211 0 000 1125678999999999999999999
Q ss_pred HHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhccc
Q 004314 356 LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAEC 435 (761)
Q Consensus 356 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 435 (761)
+|+.++.+++++++ |+++|. ++...+ +.+++.+.+.. ..|.+. +. .+++..+|+.||+
T Consensus 209 ~~~~~l~~~~~~~~----l~i~G~-----~~~~~~----~~~~~~~~~~~------~~v~~~-g~--~~~~~~~~~~~d~ 266 (353)
T cd03811 209 RAFALLRKEGPDAR----LVILGD-----GPLREE----LEALAKELGLA------DRVHFL-GF--QSNPYPYLKAADL 266 (353)
T ss_pred HHHHHhhhcCCCce----EEEEcC-----CccHHH----HHHHHHhcCCC------ccEEEe-cc--cCCHHHHHHhCCE
Confidence 99999988777655 887773 333333 33444444321 135554 44 3568899999999
Q ss_pred ceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHc
Q 004314 436 VVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQ 511 (761)
Q Consensus 436 ~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~ 511 (761)
++.||..||||++++|||+||. |+|+|+.+|..+.+. .|+++++.|.+++++++..+..
T Consensus 267 ~i~ps~~e~~~~~~~Ea~~~G~-----------------PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~ 328 (353)
T cd03811 267 FVLSSRYEGFPNVLLEAMALGT-----------------PVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLD 328 (353)
T ss_pred EEeCcccCCCCcHHHHHHHhCC-----------------CEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHh
Confidence 9999999999999999999976 999999999888874 4899999999999544444443
No 82
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.74 E-value=1.8e-16 Score=173.25 Aligned_cols=194 Identities=18% Similarity=0.226 Sum_probs=144.0
Q ss_pred EEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccc--cCChHHHHHHHHHHHHh-CCCCcCce
Q 004314 299 VGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDI--FKGVDLKLLAMEHLLKQ-HPKWQGRA 372 (761)
Q Consensus 299 ~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~--~KGi~~~l~A~~~ll~~-~P~~~~~v 372 (761)
.++.++|+|||.+.|.+... ...++.+ .++.+++.+++... .||+..+++|++.+.++ .|+ +
T Consensus 159 ~~~~vi~ngi~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRDK--------REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----I 226 (365)
T ss_pred CceEEeCCCCcccccCCCcH--------HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----e
Confidence 36789999999988854311 1223333 34566666666544 99999999999988665 344 4
Q ss_pred eEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCC-HHHHHHHHHhcccceecccccCCCcchhh
Q 004314 373 VLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVT-LSERAAYYTIAECVVVTAVRDGMNLTPYE 451 (761)
Q Consensus 373 vLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~-~~el~aly~~ADv~vvtS~~EGmnLv~~E 451 (761)
.++++|.. +.... . ..+ ..|.++ +.++ .+++..+|+.||++++||..||||++++|
T Consensus 227 ~~~i~G~~-----~~~~~------~---~~~--------~~v~~~-g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGAS-----DPEIP------P---DLP--------FPVHYL-GSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCC-----chhhh------c---cCC--------CceEec-CCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 58777742 11100 0 111 135544 5777 88999999999999999999999999999
Q ss_pred heeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHH
Q 004314 452 YIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV 528 (761)
Q Consensus 452 ama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 528 (761)
||+||. |+|+|..+|..+.+. .|+++++.|++++|++|.+++..++ ++..+.++.++++
T Consensus 284 am~~g~-----------------PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~-~~~~~~~~~~~~~ 345 (365)
T cd03825 284 ALACGT-----------------PVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADPD-EREELGEAARELA 345 (365)
T ss_pred HHhcCC-----------------CEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHH
Confidence 999976 899999988888873 4899999999999999999998653 4555566677777
Q ss_pred h-hCCHHHHHHHHHHHHH
Q 004314 529 S-THDVAYWARSFFQDME 545 (761)
Q Consensus 529 ~-~~~~~~Wa~~~l~~l~ 545 (761)
. .+++...++++++-++
T Consensus 346 ~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 346 ENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHhcCHHHHHHHHHHHHh
Confidence 4 5888898888887654
No 83
>PLN02275 transferase, transferring glycosyl groups
Probab=99.72 E-value=3.2e-16 Score=174.14 Aligned_cols=236 Identities=10% Similarity=0.003 Sum_probs=156.9
Q ss_pred CEEEEeCCccch--HHHHHHHhcCCCeEEEEEecCCCchhHHhc-C---cc----hHHHHHHh-hhcCEEeeeCHHHHHH
Q 004314 202 DYVWIHDYHLMV--LPTFLRRRFTRLRMGFFLHSPFPSSEIYRT-L---PV----REEILKAL-LNADLIGFHTFDYARH 270 (761)
Q Consensus 202 DiVwvhDyhl~l--lp~~lr~~~~~~~ig~flH~PfP~~e~fr~-l---p~----r~~il~~l-l~~DligF~t~~~~~~ 270 (761)
|+|++|..+.+. ++..+-.+..++|+.+.+|..+.+ .+.. . +. ...+.+.+ -.+|.|...+....+.
T Consensus 102 DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~~~~ 179 (371)
T PLN02275 102 DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQHE 179 (371)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHHHHH
Confidence 899999977532 233333334568898899975421 1100 0 10 11111222 3478888777766555
Q ss_pred HHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCC
Q 004314 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKG 350 (761)
Q Consensus 271 Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KG 350 (761)
..+ ..| . .+.++|+|+ .+.|.+... . ..++ .+...++++++|+.+.||
T Consensus 180 l~~----~~g----------------~--~i~vi~n~~-~~~f~~~~~-----~--~~~~--~~~~~~i~~~grl~~~k~ 227 (371)
T PLN02275 180 LDQ----NWG----------------I--RATVLYDQP-PEFFRPASL-----E--IRLR--PNRPALVVSSTSWTPDED 227 (371)
T ss_pred HHH----hcC----------------C--CeEEECCCC-HHHcCcCCc-----h--hccc--CCCcEEEEEeCceeccCC
Confidence 432 011 1 156788884 466654211 0 1111 134567889999999999
Q ss_pred hHHHHHHHHHHHH-----------------hCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004314 351 VDLKLLAMEHLLK-----------------QHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (761)
Q Consensus 351 i~~~l~A~~~ll~-----------------~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~p 413 (761)
+..+++|+..+.. ++|+ +.|+++| +|++.++++ +.+++.+ ...
T Consensus 228 ~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l~----~~~~~~~-------l~~ 287 (371)
T PLN02275 228 FGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITG-----KGPQKAMYE----EKISRLN-------LRH 287 (371)
T ss_pred HHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEe-----CCCCHHHHH----HHHHHcC-------CCc
Confidence 9999999988742 3455 4588888 456554444 4444433 235
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecc---cccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTA---VRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS- 489 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS---~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~- 489 (761)
|+++.+.++.++++.+|+.||+||+++ ..|||+++.+||||||. |+|+|..+|..+.+.
T Consensus 288 v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~-----------------PVVa~~~gg~~eiv~~ 350 (371)
T PLN02275 288 VAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGL-----------------PVCAVSYSCIGELVKD 350 (371)
T ss_pred eEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCC-----------------CEEEecCCChHHHccC
Confidence 788877889999999999999999753 24899999999999986 999999988888873
Q ss_pred --CcEEECCCCHHHHHHHHHHHH
Q 004314 490 --GAIRVNPWNIEATAEAMHEAI 510 (761)
Q Consensus 490 --~al~VnP~d~~~~A~ai~~aL 510 (761)
.|++|+ |++++|++|.++|
T Consensus 351 g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 351 GKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred CCCeEEEC--CHHHHHHHHHHhC
Confidence 488886 6999999998764
No 84
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.72 E-value=1.5e-15 Score=171.67 Aligned_cols=285 Identities=18% Similarity=0.198 Sum_probs=178.2
Q ss_pred HHHHHHhCCCCCEEEEeCCccchHHHHHHH-hcCCCeEEEEEecCCCc-hhHHhcCcchHHHHHHhh-hcCEEeeeCHHH
Q 004314 191 QRVIEVINPEDDYVWIHDYHLMVLPTFLRR-RFTRLRMGFFLHSPFPS-SEIYRTLPVREEILKALL-NADLIGFHTFDY 267 (761)
Q Consensus 191 ~~i~~~~~~~~DiVwvhDyhl~llp~~lr~-~~~~~~ig~flH~PfP~-~e~fr~lp~r~~il~~ll-~~DligF~t~~~ 267 (761)
.++++..+| |+|++|.+.++ |.+++. +..++++.+.-|...+. ...++.+ ..+.+.++ .+|.|..++...
T Consensus 117 ~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~~ 189 (425)
T PRK05749 117 RRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEED 189 (425)
T ss_pred HHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHHH
Confidence 345666787 79999987754 444433 23467777655543222 1222211 22334433 479999999988
Q ss_pred HHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc-CCCeEEEeecCcc
Q 004314 268 ARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDMD 346 (761)
Q Consensus 268 ~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld 346 (761)
.+.|.+ +|. ... +.++|++ +.+.+... ........+++++ +++++++++++.
T Consensus 190 ~~~l~~-----~g~---------------~~~-i~vi~n~-~~d~~~~~----~~~~~~~~~r~~~~~~~~vil~~~~~- 242 (425)
T PRK05749 190 AERFLA-----LGA---------------KNE-VTVTGNL-KFDIEVPP----ELAARAATLRRQLAPNRPVWIAASTH- 242 (425)
T ss_pred HHHHHH-----cCC---------------CCC-cEecccc-cccCCCCh----hhHHHHHHHHHHhcCCCcEEEEeCCC-
Confidence 877753 232 112 4455653 33322211 1112234566667 678889998875
Q ss_pred ccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcc---cCC---C-CCccEEEEcC
Q 004314 347 IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINET---FGR---P-GYEPVVFIDK 419 (761)
Q Consensus 347 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~---~g~---~-~~~pV~~~~~ 419 (761)
.|+...+++|+.++++++|+++ |+++| ++++. .+++.+++++.+-. +.. . .-..|. +.+
T Consensus 243 -~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~-l~~ 308 (425)
T PRK05749 243 -EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDVL-LGD 308 (425)
T ss_pred -chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcEE-EEe
Confidence 6889999999999988899865 77765 34442 12344444443321 100 0 001233 322
Q ss_pred CCCHHHHHHHHHhccccee-cccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccc----c-cCcEE
Q 004314 420 PVTLSERAAYYTIAECVVV-TAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS----L-SGAIR 493 (761)
Q Consensus 420 ~v~~~el~aly~~ADv~vv-tS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~----l-~~al~ 493 (761)
+..|+..+|+.||++++ +|..||+|++++|||+||. |+|++...|.... + .+|.+
T Consensus 309 --~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-----------------PVI~g~~~~~~~e~~~~~~~~g~~ 369 (425)
T PRK05749 309 --TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-----------------PVISGPHTFNFKEIFERLLQAGAA 369 (425)
T ss_pred --cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-----------------CEEECCCccCHHHHHHHHHHCCCe
Confidence 36799999999999666 7888999999999999976 8888766443322 2 35778
Q ss_pred ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHH
Q 004314 494 VNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (761)
Q Consensus 494 VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~ 545 (761)
+.|.|++++|++|.++++++ +.++.+.++.++++.++ ..=++++++.+.
T Consensus 370 ~~~~d~~~La~~l~~ll~~~-~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~ 418 (425)
T PRK05749 370 IQVEDAEDLAKAVTYLLTDP-DARQAYGEAGVAFLKQN--QGALQRTLQLLE 418 (425)
T ss_pred EEECCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHhC--ccHHHHHHHHHH
Confidence 88999999999999999864 45666777788888776 233344444444
No 85
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.69 E-value=4.5e-15 Score=167.46 Aligned_cols=297 Identities=20% Similarity=0.222 Sum_probs=200.2
Q ss_pred CCEEEEeCCccchHHHHHHHh---cCCCeEEEEEecC-----CC-chhHHhcCcc---h---------HHHH-HHhhhcC
Q 004314 201 DDYVWIHDYHLMVLPTFLRRR---FTRLRMGFFLHSP-----FP-SSEIYRTLPV---R---------EEIL-KALLNAD 258 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~---~~~~~ig~flH~P-----fP-~~e~fr~lp~---r---------~~il-~~ll~~D 258 (761)
.|||++||||+.|+|.++++. ...++.+|+.|.- |+ .....-.||. . -..+ -++..||
T Consensus 131 pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad 210 (487)
T COG0297 131 PDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYAD 210 (487)
T ss_pred CCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheecc
Confidence 389999999999999999997 6789999999953 33 1111223441 0 0223 3466788
Q ss_pred EEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhcc-----------chHHHHHH
Q 004314 259 LIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRL-----------ADKDWRVQ 327 (761)
Q Consensus 259 ligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~-----------~~~~~~~~ 327 (761)
.|.--++.|+..... ...|-. -.|. +.+ +.-++.-+=+|||.+...+.... +...+...
T Consensus 211 ~vttVSptYa~Ei~t---~~~g~g---l~g~--l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~ 280 (487)
T COG0297 211 AVTTVSPTYAGEIYT---PEYGEG---LEGL--LSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKV 280 (487)
T ss_pred EEEEECHHHHHhhcc---cccccc---chhh--hhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHH
Confidence 888888888766541 101100 0010 111 11345555678887766542110 11222334
Q ss_pred HHHHHc--C---CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHH
Q 004314 328 ELKQQF--E---GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRI 402 (761)
Q Consensus 328 ~lr~~~--~---~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~i 402 (761)
.|++.+ + +.+++..|+|++..||++.+++|+..++++. ++ ||++|. + + ..+++.+..+++++
T Consensus 281 ~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~-----g-d-~~le~~~~~la~~~ 347 (487)
T COG0297 281 ALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGT-----G-D-PELEEALRALASRH 347 (487)
T ss_pred HHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEec-----C-c-HHHHHHHHHHHHhc
Confidence 566666 2 5689999999999999999999999999987 55 777774 2 2 46778888998887
Q ss_pred hcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCC
Q 004314 403 NETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFI 482 (761)
Q Consensus 403 n~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~ 482 (761)
..++ .+.-..+..-...+|+.||++++||..|++||+-+++|.-|+ ++|+++.+
T Consensus 348 ~~~~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGt-----------------vpIv~~tG 401 (487)
T COG0297 348 PGRV---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGT-----------------LPIVRETG 401 (487)
T ss_pred CceE---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCC-----------------cceEcccC
Confidence 6432 222245677788899999999999999999999999999865 88999999
Q ss_pred CCccccc-----------CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHH--hhCCHHHHHHHHHHHHHHH
Q 004314 483 GCSPSLS-----------GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV--STHDVAYWARSFFQDMERT 547 (761)
Q Consensus 483 G~~~~l~-----------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v--~~~~~~~Wa~~~l~~l~~~ 547 (761)
|.++.+. .|+++.|.|+++++.||.+|+..-..... -+++..... ..+++..=+.+++.--+..
T Consensus 402 GLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~-~w~~~~~~~m~~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 402 GLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPL-LWRKVQPNAMGADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred CccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHH-HHHHHHHhhcccccCchhHHHHHHHHHHHH
Confidence 9998873 27888888999999999999975432211 022222222 3455566666666554443
No 86
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.67 E-value=3.5e-16 Score=159.00 Aligned_cols=158 Identities=22% Similarity=0.267 Sum_probs=118.3
Q ss_pred eEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecCCcceee
Q 004314 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQN 672 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~~~w~~ 672 (761)
+|++||||||++.. ...++++++++|++|+++ +..|+|+|||+...+.+++..+ +.+++++||++++.+++..|..
T Consensus 1 li~~D~DgTL~~~~--~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~~ 76 (204)
T TIGR01484 1 LLFFDLDGTLLDPN--AHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYIE 76 (204)
T ss_pred CEEEeCcCCCcCCC--CCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEEc
Confidence 68999999999832 256889999999999975 6999999999999999999874 4789999999999876555553
Q ss_pred cCcCcCcchHHH------HHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcC-CCcEEE-e
Q 004314 673 CGQSVDFGWIQI------AEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLAN-EPAAVK-S 744 (761)
Q Consensus 673 ~~~~~~~~w~~~------v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~-~~v~V~-~ 744 (761)
....|... +..++..+.+.++|..+|.+...+.+||++.. .......++.+.++....+ ..+.+. +
T Consensus 77 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s 150 (204)
T TIGR01484 77 ----PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAE--LGQELDSKMRERLEKIGRNDLELEAIYV 150 (204)
T ss_pred ----ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccc--hhhHHHHHHHHHHHhhccccCcEEEEEe
Confidence 11223322 23344455567789999999999999998761 1123344556666554221 457777 7
Q ss_pred CCeEEEEEeCCCCcCC
Q 004314 745 GQFIVEVKPQVYIQLR 760 (761)
Q Consensus 745 G~~~vEV~p~gvnKG~ 760 (761)
|..++||+|+++|||.
T Consensus 151 ~~~~~ev~p~~~~K~~ 166 (204)
T TIGR01484 151 GKTDLEVLPAGVDKGS 166 (204)
T ss_pred cCCEEEEecCCCChHH
Confidence 9999999999999985
No 87
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.64 E-value=1.7e-15 Score=148.96 Aligned_cols=154 Identities=21% Similarity=0.371 Sum_probs=117.7
Q ss_pred CCCeEEEeecCccccCChHHHHHHHHHHHHh-CCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQ-HPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~-~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~ 412 (761)
.++++|++++|+++.||+..+++|+..+.++ .|++. |+++|. ++.. ..+..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYK----LVIVGD-----GEYK----KELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEE----EEEESH-----CCHH----HHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeE----EEEEcc-----cccc----ccccccccccccc------c
Confidence 5789999999999999999999999999875 66554 877762 2222 3344444443321 2
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---
Q 004314 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS--- 489 (761)
Q Consensus 413 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--- 489 (761)
.|.++. .++.+++.++|+.||++|.||..||+|++++|||+||. |+|+|..+|..+.+.
T Consensus 74 ~i~~~~-~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~-----------------pvI~~~~~~~~e~~~~~~ 135 (172)
T PF00534_consen 74 NIIFLG-YVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC-----------------PVIASDIGGNNEIINDGV 135 (172)
T ss_dssp TEEEEE-SHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT------------------EEEEESSTHHHHHSGTTT
T ss_pred cccccc-cccccccccccccceecccccccccccccccccccccc-----------------ceeeccccCCceeecccc
Confidence 477664 66789999999999999999999999999999999975 999999888877773
Q ss_pred CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHh
Q 004314 490 GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHY 525 (761)
Q Consensus 490 ~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 525 (761)
.|++++|.|+++++++|.+++.++ +.++...++.+
T Consensus 136 ~g~~~~~~~~~~l~~~i~~~l~~~-~~~~~l~~~~~ 170 (172)
T PF00534_consen 136 NGFLFDPNDIEELADAIEKLLNDP-ELRQKLGKNAR 170 (172)
T ss_dssp SEEEESTTSHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred ceEEeCCCCHHHHHHHHHHHHCCH-HHHHHHHHHhc
Confidence 379999999999999999999976 33333333333
No 88
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.56 E-value=1.7e-14 Score=151.51 Aligned_cols=240 Identities=17% Similarity=0.179 Sum_probs=170.5
Q ss_pred EEEEeCCccchHHHHHHH-hcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCc
Q 004314 203 YVWIHDYHLMVLPTFLRR-RFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGL 281 (761)
Q Consensus 203 iVwvhDyhl~llp~~lr~-~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~ 281 (761)
+|+-|.-.-.+.-..|+. +....++.|+=|+-|--.++- +.+--.++-|. |...+|.+++
T Consensus 92 ivhghs~fS~lahe~l~hartMGlktVfTdHSlfGfad~~-----------si~~n~ll~~s--------L~~id~~IcV 152 (426)
T KOG1111|consen 92 IVHGHSPFSYLAHEALMHARTMGLKTVFTDHSLFGFADIG-----------SILTNKLLPLS--------LANIDRIICV 152 (426)
T ss_pred EEecCChHHHHHHHHHHHHHhcCceEEEeccccccccchh-----------hhhhcceeeee--------ecCCCcEEEE
Confidence 454444333333333332 234588999999866422221 11111222221 3445677788
Q ss_pred eeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc-CCCeEEEeecCccccCChHHHHHHHHH
Q 004314 282 EYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDMDIFKGVDLKLLAMEH 360 (761)
Q Consensus 282 ~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~l~A~~~ 360 (761)
++.++.+.. +.-.-...++.++|+-++...|.|.... +. .+...|+.++||-|.||+++++.++.+
T Consensus 153 shtskentv-lr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 153 SHTSKENTV-LRGALAPAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred eecCCCceE-EEeccCHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 888876642 3222334688999999999999885321 22 345789999999999999999999999
Q ss_pred HHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecc
Q 004314 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTA 440 (761)
Q Consensus 361 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 440 (761)
+-++||+.+ ++++| +||....+++.+++. + -..+|+++ |.++++++...|...|||+.||
T Consensus 220 vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~----~------l~~rV~~l-G~v~h~~Vr~vl~~G~IFlntS 279 (426)
T KOG1111|consen 220 VCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL----F------LQDRVVML-GTVPHDRVRDVLVRGDIFLNTS 279 (426)
T ss_pred HHhcCCCee----EEEec-----CCcccchHHHHHHHh----h------ccCceEEe-cccchHHHHHHHhcCcEEeccH
Confidence 999999987 88776 567554454444433 2 12478865 6899999999999999999999
Q ss_pred cccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccccCc-EEECCCCHHHHHHHHHHHHc
Q 004314 441 VRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGA-IRVNPWNIEATAEAMHEAIQ 511 (761)
Q Consensus 441 ~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a-l~VnP~d~~~~A~ai~~aL~ 511 (761)
+.|.|+++.+||+.||. ++|.+..+|..+.|... +..-+-.++++++++.+|++
T Consensus 280 lTEafc~~ivEAaScGL-----------------~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~ 334 (426)
T KOG1111|consen 280 LTEAFCMVIVEAASCGL-----------------PVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAIT 334 (426)
T ss_pred HHHHHHHHHHHHHhCCC-----------------EEEEeecCCccccCCccceeccCCChHHHHHHHHHHHH
Confidence 99999999999999986 88999999999999644 43555578888888888886
No 89
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.55 E-value=2.7e-13 Score=150.79 Aligned_cols=266 Identities=13% Similarity=0.127 Sum_probs=166.7
Q ss_pred CCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHH-HHhhhcCEEeeeCHHHHHHHHHHHh
Q 004314 198 NPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEIL-KALLNADLIGFHTFDYARHFLSCCS 276 (761)
Q Consensus 198 ~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il-~~ll~~DligF~t~~~~~~Fl~~~~ 276 (761)
+.++.++|.+..-...+... .+..++++-+|--|+..... -+....+. ..+-.||+|...+....+++..
T Consensus 100 ~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~--- 170 (373)
T cd04950 100 GFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR--- 170 (373)
T ss_pred CCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh---
Confidence 44557888886554444333 45667777766545432110 01111112 2245689988877765543321
Q ss_pred hhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHH
Q 004314 277 RMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLL 356 (761)
Q Consensus 277 r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~ 356 (761)
+ + .++.++|+|+|.+.|.+....+. . .+.+ ...++++++++|+++..+++. +|.
T Consensus 171 -----------------~-~--~~i~~i~ngvd~~~f~~~~~~~~-~--~~~~--~~~~~~~i~y~G~l~~~~d~~-ll~ 224 (373)
T cd04950 171 -----------------L-N--PNVVLVPNGVDYEHFAAARDPPP-P--PADL--AALPRPVIGYYGAIAEWLDLE-LLE 224 (373)
T ss_pred -----------------C-C--CCEEEcccccCHHHhhcccccCC-C--hhHH--hcCCCCEEEEEeccccccCHH-HHH
Confidence 1 1 25678999999999875322111 0 0111 114678999999999966654 333
Q ss_pred HHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccc
Q 004314 357 AMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECV 436 (761)
Q Consensus 357 A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~ 436 (761)
.+.+.+|+++ |++||.. +...+. ..+ . ....|+|+ |.++.++++++|+.||++
T Consensus 225 ---~la~~~p~~~----~vliG~~-----~~~~~~----~~~----~------~~~nV~~~-G~~~~~~l~~~l~~~Dv~ 277 (373)
T cd04950 225 ---ALAKARPDWS----FVLIGPV-----DVSIDP----SAL----L------RLPNVHYL-GPKPYKELPAYLAGFDVA 277 (373)
T ss_pred ---HHHHHCCCCE----EEEECCC-----cCccCh----hHh----c------cCCCEEEe-CCCCHHHHHHHHHhCCEE
Confidence 3445678876 8888742 110010 111 1 01247765 689999999999999999
Q ss_pred eeccc-----ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccccCcEEECCCCHHHHHHHHHHHHc
Q 004314 437 VVTAV-----RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQ 511 (761)
Q Consensus 437 vvtS~-----~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~ 511 (761)
++|+. +.++++..+||||||. |+|+|.+..+.+.. ++..+.+.|+++++++|.++|.
T Consensus 278 l~P~~~~~~~~~~~P~Kl~EylA~G~-----------------PVVat~~~~~~~~~-~~~~~~~~d~~~~~~ai~~~l~ 339 (373)
T cd04950 278 ILPFRLNELTRATSPLKLFEYLAAGK-----------------PVVATPLPEVRRYE-DEVVLIADDPEEFVAAIEKALL 339 (373)
T ss_pred ecCCccchhhhcCCcchHHHHhccCC-----------------CEEecCcHHHHhhc-CcEEEeCCCHHHHHHHHHHHHh
Confidence 99986 3578899999999986 89988765544332 3344456699999999999887
Q ss_pred CCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHH
Q 004314 512 MNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMER 546 (761)
Q Consensus 512 m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~ 546 (761)
.+..++..+. .+.+++|++..=++.+++.|..
T Consensus 340 ~~~~~~~~~~---~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 340 EDGPARERRR---LRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred cCCchHHHHH---HHHHHHCCHHHHHHHHHHHHHh
Confidence 6544433322 2268889988888888866653
No 90
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.45 E-value=1.2e-11 Score=138.13 Aligned_cols=191 Identities=16% Similarity=0.180 Sum_probs=125.3
Q ss_pred EEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccCChHHHHHHHHHHHHh----CCCCcCce
Q 004314 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQ----HPKWQGRA 372 (761)
Q Consensus 300 ~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~A~~~ll~~----~P~~~~~v 372 (761)
+|.+++++|+.+.+.+.. ...++++++ +++++|+.+||....||+...++++..++.. .|+.+
T Consensus 174 ki~v~g~~v~~~f~~~~~-------~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~--- 243 (382)
T PLN02605 174 QIRVYGLPIRPSFARAVR-------PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ--- 243 (382)
T ss_pred HEEEECcccCHhhccCCC-------CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce---
Confidence 566678888865433211 123456666 4688999999999999999999999876521 23332
Q ss_pred eEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhh
Q 004314 373 VLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEY 452 (761)
Q Consensus 373 vLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea 452 (761)
++.+++ +++ ++++++.+... + ..|.++ |.+ +++..||++||++|.+| .++++.||
T Consensus 244 -~~vi~G----~~~---~~~~~L~~~~~--~--------~~v~~~-G~~--~~~~~l~~aaDv~V~~~----g~~ti~EA 298 (382)
T PLN02605 244 -VVVICG----RNK---KLQSKLESRDW--K--------IPVKVR-GFV--TNMEEWMGACDCIITKA----GPGTIAEA 298 (382)
T ss_pred -EEEEEC----CCH---HHHHHHHhhcc--c--------CCeEEE-ecc--ccHHHHHHhCCEEEECC----CcchHHHH
Confidence 333442 222 23333333210 1 136644 455 47999999999999865 37899999
Q ss_pred eeeecCCCCCCCCCCCCCCCCceEEEcCCC-----CCcccc-cCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhh
Q 004314 453 IVCRQGVSGSESSSESSAPKKSMLVVSEFI-----GCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYR 526 (761)
Q Consensus 453 ma~~~~~~~~~~~~~~~~~~~g~lV~Se~~-----G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 526 (761)
|+||. |+|++... |.++.+ .++.-+.+.|+++++++|.++|.+.++.++.+.++.++
T Consensus 299 ma~g~-----------------PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~~~ 361 (382)
T PLN02605 299 LIRGL-----------------PIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENALK 361 (382)
T ss_pred HHcCC-----------------CEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99986 89998752 333434 33333445899999999999999744556666667777
Q ss_pred HHhhCCHHHHHHHHHH
Q 004314 527 YVSTHDVAYWARSFFQ 542 (761)
Q Consensus 527 ~v~~~~~~~Wa~~~l~ 542 (761)
+...+....-++.+++
T Consensus 362 ~~~~~a~~~i~~~l~~ 377 (382)
T PLN02605 362 LARPEAVFDIVHDLHE 377 (382)
T ss_pred hcCCchHHHHHHHHHH
Confidence 7777766665654443
No 91
>PTZ00174 phosphomannomutase; Provisional
Probab=99.40 E-value=6.8e-12 Score=131.71 Aligned_cols=168 Identities=14% Similarity=0.134 Sum_probs=100.6
Q ss_pred ccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC--CCc-eEEccCCeEEeec
Q 004314 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC--KKL-GIAAEHGYFMRWS 665 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~--~~l-~liaehGa~ir~~ 665 (761)
.+.|+|++|+||||++ .+...+++++++|++|.+ .|..|+|+|||++..+.+.++.. ..+ .+|++||+.|+..
T Consensus 3 ~~~klia~DlDGTLL~---~~~~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~ 78 (247)
T PTZ00174 3 MKKTILLFDVDGTLTK---PRNPITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKD 78 (247)
T ss_pred CCCeEEEEECcCCCcC---CCCCCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEEC
Confidence 3579999999999998 456788999999999986 69999999999999999988632 222 5799999999864
Q ss_pred CCcceeecCc-CcCcchHHHHHHHHHHH-----hcCCCccEEEecCceEEEEcccCCC------C---C-c-hHHHHHHH
Q 004314 666 ADEEWQNCGQ-SVDFGWIQIAEPVMKLY-----TESTDGSYIEIKESALVWHHRDADP------G---F-G-SSQAKELL 728 (761)
Q Consensus 666 ~~~~w~~~~~-~~~~~w~~~v~~im~~y-----~~~t~Gs~iE~k~~~l~~hyr~ad~------d---~-~-~~qa~el~ 728 (761)
++..+..... ..+.++...+....+.+ .....+.|++.........+..... + + . .....++.
T Consensus 79 ~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (247)
T PTZ00174 79 GELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFI 158 (247)
T ss_pred CeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHH
Confidence 3222222111 01222322222222221 1223455655432111111110000 0 0 0 11234556
Q ss_pred HHHHHHhcCCCcEEEe-CCeEEEEEeCCCCcCC
Q 004314 729 DHLESVLANEPAAVKS-GQFIVEVKPQVYIQLR 760 (761)
Q Consensus 729 ~~L~~~l~~~~v~V~~-G~~~vEV~p~gvnKG~ 760 (761)
+.+.+.+.+..+.... |..++||.|+|+|||.
T Consensus 159 ~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~ 191 (247)
T PTZ00174 159 QDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTY 191 (247)
T ss_pred HHHHHhcCCCCeEEEecCceEEEeeeCCCcHHH
Confidence 6666555433333443 5689999999999984
No 92
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.39 E-value=5e-12 Score=133.85 Aligned_cols=161 Identities=16% Similarity=0.097 Sum_probs=101.2
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCC-ceEEccCCeEEeecCCc
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKK-LGIAAEHGYFMRWSADE 668 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~-l~liaehGa~ir~~~~~ 668 (761)
..|+|++|+||||++. +..++++++++|+++.+ ++..|+++|||+...+.+.+..+.- ..+|++||+++.+.++.
T Consensus 2 ~~kli~~DlDGTLl~~---~~~i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 77 (264)
T COG0561 2 MIKLLAFDLDGTLLDS---NKTISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGEL 77 (264)
T ss_pred CeeEEEEcCCCCccCC---CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcE
Confidence 4689999999999994 45589999999999986 6999999999999999999987632 36999999999998332
Q ss_pred ceeecCcCcCcchHHHHHHHHHHHhcC--CCccEEEecCceE-----------------EEEcccCC--C-------CCc
Q 004314 669 EWQNCGQSVDFGWIQIAEPVMKLYTES--TDGSYIEIKESAL-----------------VWHHRDAD--P-------GFG 720 (761)
Q Consensus 669 ~w~~~~~~~~~~w~~~v~~im~~y~~~--t~Gs~iE~k~~~l-----------------~~hyr~ad--~-------d~~ 720 (761)
.... .-..+.+..+++..... ....+........ .+.....+ . +..
T Consensus 78 i~~~------~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T COG0561 78 LFQK------PLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKD 151 (264)
T ss_pred Eeee------cCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecC
Confidence 2222 11234455555443221 1111111110000 00000000 0 011
Q ss_pred hHHHHHHHHHHHHHhcCCCcEEEeCCeE-EEEEeCCCCcCC
Q 004314 721 SSQAKELLDHLESVLANEPAAVKSGQFI-VEVKPQVYIQLR 760 (761)
Q Consensus 721 ~~qa~el~~~L~~~l~~~~v~V~~G~~~-vEV~p~gvnKG~ 760 (761)
.....++...+.+.+....+.+.++..+ +||.|+|+|||.
T Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~ 192 (264)
T COG0561 152 HEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGY 192 (264)
T ss_pred hHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHH
Confidence 2233455555665555445666666655 999999999984
No 93
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.37 E-value=3.3e-12 Score=134.19 Aligned_cols=158 Identities=12% Similarity=0.164 Sum_probs=105.3
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc---CC-CCceEEccCCeEEeecC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS---PC-KKLGIAAEHGYFMRWSA 666 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~---~~-~~l~liaehGa~ir~~~ 666 (761)
+.+|++|+||||++....+...++++.++++++.+ +++.++++|||+...+++... .. |+ .+|++||+.|..++
T Consensus 1 ~~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~ 78 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGG 78 (249)
T ss_pred CeEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCC
Confidence 35899999999998432345567999999999885 688999999999998888843 22 33 47889999998753
Q ss_pred C----cceeecCcCcCcchH-HHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcCC--C
Q 004314 667 D----EEWQNCGQSVDFGWI-QIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE--P 739 (761)
Q Consensus 667 ~----~~w~~~~~~~~~~w~-~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~--~ 739 (761)
. ..|.. .....|. +.+..+...+...++....+++...+.+.+... ++.++..++.+.+... .
T Consensus 79 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~l~~~l~~~~~~ 148 (249)
T TIGR01485 79 AEVPDQHWAE---YLSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPE-------AAPEVIKQLTEMLKETGLD 148 (249)
T ss_pred CCcCCHHHHH---HHhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechh-------hhhHHHHHHHHHHHhcCCC
Confidence 1 11221 1123454 334455555555556666666677877764321 2223444455444332 3
Q ss_pred cEE-EeCCeEEEEEeCCCCcCC
Q 004314 740 AAV-KSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 740 v~V-~~G~~~vEV~p~gvnKG~ 760 (761)
+.+ .+|..++||.|+++|||.
T Consensus 149 ~~~~~~~~~~ldi~~~~~~K~~ 170 (249)
T TIGR01485 149 VKLIYSSGKDLDILPQGSGKGQ 170 (249)
T ss_pred EEEEEECCceEEEEeCCCChHH
Confidence 443 568899999999999984
No 94
>PLN02423 phosphomannomutase
Probab=99.34 E-value=2.3e-11 Score=127.49 Aligned_cols=161 Identities=17% Similarity=0.177 Sum_probs=98.5
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC-C-C-ceEEccCCeEEeecCC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC-K-K-LGIAAEHGYFMRWSAD 667 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~-~-~-l~liaehGa~ir~~~~ 667 (761)
++++++|+||||++ .+...+++++++|++|.+ . ..|+++|||++..+.+.|+.. . . ..++++||+.+...++
T Consensus 7 ~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l~~-~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g~ 81 (245)
T PLN02423 7 GVIALFDVDGTLTA---PRKEATPEMLEFMKELRK-V-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDGK 81 (245)
T ss_pred ceEEEEeccCCCcC---CCCcCCHHHHHHHHHHHh-C-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCCE
Confidence 44666999999997 345677999999999995 4 999999999999999988763 2 1 3689999999985432
Q ss_pred cceeecC-cCcCcchHHHHHHHHHHH---h-----cCCCccEEEecCceEEEE--cccCCC----------CCchHHHHH
Q 004314 668 EEWQNCG-QSVDFGWIQIAEPVMKLY---T-----ESTDGSYIEIKESALVWH--HRDADP----------GFGSSQAKE 726 (761)
Q Consensus 668 ~~w~~~~-~~~~~~w~~~v~~im~~y---~-----~~t~Gs~iE~k~~~l~~h--yr~ad~----------d~~~~qa~e 726 (761)
..+.... ...+ .+.+.++++.. . ....+.+++..+..+.+. +.++.. .. .....+
T Consensus 82 ~i~~~~l~~~l~---~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i-~~~~~~ 157 (245)
T PLN02423 82 LIGTQSLKSFLG---EDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKV-HNIRPK 157 (245)
T ss_pred EEEEecccccCC---HHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCcc-chHHHH
Confidence 2222111 1111 12333333221 1 123466777544332222 122200 01 223345
Q ss_pred HHHHHHHHhcCCCcEE-EeCCeEEEEEeCCCCcCC
Q 004314 727 LLDHLESVLANEPAAV-KSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 727 l~~~L~~~l~~~~v~V-~~G~~~vEV~p~gvnKG~ 760 (761)
+...|.+.+.+..+.+ .+|..+|||.|+|+|||.
T Consensus 158 ~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~ 192 (245)
T PLN02423 158 MVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTY 192 (245)
T ss_pred HHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHH
Confidence 5566666664323333 347799999999999984
No 95
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.32 E-value=7.1e-11 Score=131.94 Aligned_cols=184 Identities=15% Similarity=0.152 Sum_probs=139.3
Q ss_pred CeEEEeecCccccCChHHHHHHHHHHHHhCCCCc-CceeEEEEecC-CCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004314 336 KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQ-GRAVLVQIANP-ARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (761)
Q Consensus 336 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~-~~vvLvqi~~p-~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~p 413 (761)
..+...+.|+.+-||+.+.|.||..+...-|+.. ....++..+++ +.+...+..++..++.+++++.+. +| .
T Consensus 273 d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l-~g-----~ 346 (495)
T KOG0853|consen 273 DRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL-LG-----Q 346 (495)
T ss_pred ceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc-cC-----c
Confidence 6788999999999999999999999987775411 12334444433 223334455666788888877642 12 3
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---C
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---G 490 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 490 (761)
++++..+.++.+...+++.+.+..+++..|.||+|++|||+||. |+|++..+|..|++. +
T Consensus 347 ~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~gl-----------------PvvAt~~GGP~EiV~~~~t 409 (495)
T KOG0853|consen 347 FVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGL-----------------PVVATNNGGPAEIVVHGVT 409 (495)
T ss_pred eEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCC-----------------CEEEecCCCceEEEEcCCc
Confidence 55666677888887777777888888888999999999999986 999999999999983 5
Q ss_pred cEEECCCCHH---HHHHHHHHHHcCCHHHHHHHHHHHhhHHhh-CCHHHHHHHHHHHHHHHH
Q 004314 491 AIRVNPWNIE---ATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWARSFFQDMERTC 548 (761)
Q Consensus 491 al~VnP~d~~---~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~Wa~~~l~~l~~~~ 548 (761)
|++++| +.+ .+|++|.++.+.|+ .+..+.++.++.|.+ +++ +.|.+.+....
T Consensus 410 G~l~dp-~~e~~~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~----~~~~~ri~~~~ 465 (495)
T KOG0853|consen 410 GLLIDP-GQEAVAELADALLKLRRDPE-LWARMGKNGLKRVKEMFSW----QHYSERIASVL 465 (495)
T ss_pred ceeeCC-chHHHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhH----HHHHHHHHHHh
Confidence 999999 666 59999999999875 466777779999988 555 45555555443
No 96
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.30 E-value=5.8e-10 Score=124.22 Aligned_cols=268 Identities=10% Similarity=0.083 Sum_probs=158.9
Q ss_pred HHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHH
Q 004314 188 IFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDY 267 (761)
Q Consensus 188 ~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~ 267 (761)
.-..++++..+| |+|+.| +....++.+.+....++|+....+-..+.. ..+ .-.+|.+-..+...
T Consensus 94 ~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~td~~~~~---------~~~---~~~ad~i~~~s~~~ 158 (380)
T PRK13609 94 KRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVLTDFCLHK---------IWV---HREVDRYFVATDHV 158 (380)
T ss_pred HHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeCCCCCCc---------ccc---cCCCCEEEECCHHH
Confidence 334456666677 798885 555667766666555677653332111110 011 12578888777665
Q ss_pred HHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcc-cchhhhccchHHHHHHHHHHHc---CCCe-EEEee
Q 004314 268 ARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMG-QIESVLRLADKDWRVQELKQQF---EGKT-VLLGV 342 (761)
Q Consensus 268 ~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~-~f~~~~~~~~~~~~~~~lr~~~---~~~~-vil~V 342 (761)
.+.+.+ .|+. ..+|.++ |++.. .|.... + ...+++++ ++++ +++..
T Consensus 159 ~~~l~~-----~gi~---------------~~ki~v~--G~p~~~~f~~~~---~----~~~~~~~~~l~~~~~~il~~~ 209 (380)
T PRK13609 159 KKVLVD-----IGVP---------------PEQVVET--GIPIRSSFELKI---N----PDIIYNKYQLCPNKKILLIMA 209 (380)
T ss_pred HHHHHH-----cCCC---------------hhHEEEE--CcccChHHcCcC---C----HHHHHHHcCCCCCCcEEEEEc
Confidence 444432 1321 1133333 33332 232211 1 12345555 2444 55667
Q ss_pred cCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCC
Q 004314 343 DDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVT 422 (761)
Q Consensus 343 dRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~ 422 (761)
|++...||+...++++.+ .|+++ ++++++. ++ .+++++++++++.+ ..|+++ +.+
T Consensus 210 G~~~~~k~~~~li~~l~~----~~~~~----~viv~G~---~~----~~~~~l~~~~~~~~--------~~v~~~-g~~- 264 (380)
T PRK13609 210 GAHGVLGNVKELCQSLMS----VPDLQ----VVVVCGK---NE----ALKQSLEDLQETNP--------DALKVF-GYV- 264 (380)
T ss_pred CCCCCCcCHHHHHHHHhh----CCCcE----EEEEeCC---CH----HHHHHHHHHHhcCC--------CcEEEE-ech-
Confidence 899989999988887642 35544 6666532 11 23345555543322 247766 454
Q ss_pred HHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcC-CCCCc----ccc-cCcEEECC
Q 004314 423 LSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE-FIGCS----PSL-SGAIRVNP 496 (761)
Q Consensus 423 ~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~----~~l-~~al~VnP 496 (761)
+++..+|+.||++|. ++.|++.+|||+||. |+|++. ..|.. ..+ ..|..+.+
T Consensus 265 -~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g~-----------------PvI~~~~~~g~~~~n~~~~~~~G~~~~~ 322 (380)
T PRK13609 265 -ENIDELFRVTSCMIT----KPGGITLSEAAALGV-----------------PVILYKPVPGQEKENAMYFERKGAAVVI 322 (380)
T ss_pred -hhHHHHHHhccEEEe----CCCchHHHHHHHhCC-----------------CEEECCCCCCcchHHHHHHHhCCcEEEE
Confidence 468899999999874 455899999999986 888875 44421 122 23444556
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHH
Q 004314 497 WNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERT 547 (761)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~ 547 (761)
.|+++++++|.++++.++ .++.+.++.+++...++....++.+++.+...
T Consensus 323 ~~~~~l~~~i~~ll~~~~-~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 323 RDDEEVFAKTEALLQDDM-KLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred CCHHHHHHHHHHHHCCHH-HHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 799999999999998653 45555555667777788888888887766543
No 97
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.28 E-value=5.2e-11 Score=126.71 Aligned_cols=71 Identities=17% Similarity=0.179 Sum_probs=61.1
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeec
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWS 665 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~ 665 (761)
.|+|++|+||||++ .+..++++++++|++|.+ +|..|+++|||++..+.+.+..+. +..+|+.||+.|+..
T Consensus 2 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~ 73 (272)
T PRK15126 2 ARLAAFDMDGTLLM---PDHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSL 73 (272)
T ss_pred ccEEEEeCCCcCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcC
Confidence 47999999999998 345689999999999986 699999999999999998887652 345899999999864
No 98
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.28 E-value=1.3e-10 Score=122.83 Aligned_cols=197 Identities=22% Similarity=0.283 Sum_probs=142.1
Q ss_pred EEEEeccccCcccchhh-hccchHHHHHHHHHHHcCC--CeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEE
Q 004314 300 GIKIMPVGIHMGQIESV-LRLADKDWRVQELKQQFEG--KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ 376 (761)
Q Consensus 300 ~i~v~P~GId~~~f~~~-~~~~~~~~~~~~lr~~~~~--~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 376 (761)
.+.++|+|+++..+... .. ...+ ..++++++|+++.||+...++|+..+.+..++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIG-------------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccC-------------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 56778999999887642 00 0112 36899999999999999999999999877665 34666
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeee
Q 004314 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (761)
Q Consensus 377 i~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~ 456 (761)
+|... +. ...+..++...+. ...|.+ .+.++.+++..+|+.||+++.||..||+|++.+|||+||
T Consensus 236 ~g~~~-----~~---~~~~~~~~~~~~~------~~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g 300 (381)
T COG0438 236 VGDGP-----ER---REELEKLAKKLGL------EDNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG 300 (381)
T ss_pred EcCCC-----cc---HHHHHHHHHHhCC------CCcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC
Confidence 66422 21 1223334444332 123555 667888899999999999999999999999999999997
Q ss_pred cCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-C--cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHH-hhCC
Q 004314 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G--AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHD 532 (761)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~--al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~ 532 (761)
. |+|+|...|..+.+. + |+++++.|.+++++++..+++++ +.++...+..++.+ ..++
T Consensus 301 ~-----------------pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~ 362 (381)
T COG0438 301 T-----------------PVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFS 362 (381)
T ss_pred C-----------------cEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcC
Confidence 5 899999998888885 3 77888888999999999999987 33333333344444 4666
Q ss_pred HHHHHHHHHHHHHH
Q 004314 533 VAYWARSFFQDMER 546 (761)
Q Consensus 533 ~~~Wa~~~l~~l~~ 546 (761)
+..-++.+..-+..
T Consensus 363 ~~~~~~~~~~~~~~ 376 (381)
T COG0438 363 WERIAEQLLELYEE 376 (381)
T ss_pred HHHHHHHHHHHHHH
Confidence 66666555555544
No 99
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.28 E-value=2.3e-10 Score=126.16 Aligned_cols=256 Identities=16% Similarity=0.094 Sum_probs=157.9
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHF 271 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~F 271 (761)
++++..+| |+|+.|+....+... +..+..+.|+.++.|..+|.. .+.++- ..+|.+...+.+- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~~~~-~~~~~~~~p~v~~~~~~~~~~--------~~r~~~--~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSGPGG-LAARLLGIPLVIHEQNAVPGL--------ANKLLA--RFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchhHHH-HHHHHcCCCEEEEcCCCCccH--------HHHHHH--HHhchheECchhh---h
Confidence 34454555 899999865544434 444556788887766555421 011111 1345443333210 0
Q ss_pred HHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc-CCCeEEEeecCccccCC
Q 004314 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDMDIFKG 350 (761)
Q Consensus 272 l~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KG 350 (761)
. . ....++.++|+|||.+.+.+. .. ..++ .. ++.++|+.+++....|+
T Consensus 149 ~--------------------~--~~~~~i~vi~n~v~~~~~~~~----~~---~~~~--~~~~~~~~i~~~gg~~~~~~ 197 (357)
T PRK00726 149 P--------------------E--FFKPKAVVTGNPVREEILALA----AP---PARL--AGREGKPTLLVVGGSQGARV 197 (357)
T ss_pred h--------------------c--cCCCCEEEECCCCChHhhccc----ch---hhhc--cCCCCCeEEEEECCcHhHHH
Confidence 0 0 122468899999998765421 10 0111 12 36788899999999999
Q ss_pred hHHHH-HHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHH
Q 004314 351 VDLKL-LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAY 429 (761)
Q Consensus 351 i~~~l-~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~al 429 (761)
+..++ +|+.++.. .| .+++++|. ++. +++.+. .+ .+ .. |.+. +.+ +++..+
T Consensus 198 ~~~~l~~a~~~~~~-~~-----~~~~~~G~-----g~~-~~~~~~----~~-~~-------~~-v~~~-g~~--~~~~~~ 249 (357)
T PRK00726 198 LNEAVPEALALLPE-AL-----QVIHQTGK-----GDL-EEVRAA----YA-AG-------IN-AEVV-PFI--DDMAAA 249 (357)
T ss_pred HHHHHHHHHHHhhh-Cc-----EEEEEcCC-----CcH-HHHHHH----hh-cC-------Cc-EEEe-ehH--hhHHHH
Confidence 87776 88887743 22 23555553 321 222222 21 11 12 5544 443 689999
Q ss_pred HHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCC--------cccc---cCcEEECCCC
Q 004314 430 YTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC--------SPSL---SGAIRVNPWN 498 (761)
Q Consensus 430 y~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--------~~~l---~~al~VnP~d 498 (761)
|+.||+++.+| | +.+.+|||+||. |+|++...|. ++.+ ..|++++|.|
T Consensus 250 ~~~~d~~i~~~---g-~~~~~Ea~~~g~-----------------Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~ 308 (357)
T PRK00726 250 YAAADLVICRA---G-ASTVAELAAAGL-----------------PAILVPLPHAADDHQTANARALVDAGAALLIPQSD 308 (357)
T ss_pred HHhCCEEEECC---C-HHHHHHHHHhCC-----------------CEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEccc
Confidence 99999999877 3 588999999986 7777654321 2334 2378898888
Q ss_pred --HHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHH
Q 004314 499 --IEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (761)
Q Consensus 499 --~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l 544 (761)
+++++++|.+++.++ +.++...+..+++..+.+...-++.+++.+
T Consensus 309 ~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 309 LTPEKLAEKLLELLSDP-ERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred CCHHHHHHHHHHHHcCH-HHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 999999999999974 455666666777787788777777776654
No 100
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.27 E-value=7.8e-11 Score=118.99 Aligned_cols=111 Identities=19% Similarity=0.248 Sum_probs=82.9
Q ss_pred eecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCC
Q 004314 341 GVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420 (761)
Q Consensus 341 ~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~ 420 (761)
++||+.+.||+...++|+..+.+++|+++ ++++|.. .+....+ .++... + ....|.+++ .
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~-----~~~~~~~----~~~~~~----~--~~~~v~~~~-~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDG-----PEREYLE----ELLAAL----L--LLDRVIFLG-G 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCC-----CChHHHH----HHHHhc----C--CcccEEEeC-C
Confidence 89999999999999999999988887765 8888742 1111111 111111 1 123577665 4
Q ss_pred C-CHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc
Q 004314 421 V-TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL 488 (761)
Q Consensus 421 v-~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (761)
+ +.+++..+++.||+++.||..||++.+.+|||+||. |+|+|+..|..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~-----------------pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGL-----------------PVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCC-----------------CEEEcCCCCcceEE
Confidence 4 566677777779999999999999999999999976 99999998887755
No 101
>PRK10976 putative hydrolase; Provisional
Probab=99.25 E-value=4.6e-11 Score=126.55 Aligned_cols=71 Identities=15% Similarity=0.154 Sum_probs=61.1
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeec
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWS 665 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~ 665 (761)
.|+|++|+||||++. +...+++++++|++|.+ +|..|+|+|||+...+.+.+..++ +..+|+.||+.+...
T Consensus 2 ikli~~DlDGTLl~~---~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~ 73 (266)
T PRK10976 2 YQVVASDLDGTLLSP---DHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDT 73 (266)
T ss_pred ceEEEEeCCCCCcCC---CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECC
Confidence 489999999999983 45688999999999995 799999999999999998887653 345899999999864
No 102
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.23 E-value=1.1e-09 Score=120.07 Aligned_cols=246 Identities=16% Similarity=0.166 Sum_probs=147.7
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHF 271 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~F 271 (761)
++++..+| |+|+.|..... ++..+..+..++|+.++-|..||.. . +.++ ...+|.|...+....+.
T Consensus 83 ~~i~~~~p--DvI~~~~~~~~-~~~~~~a~~~~~p~v~~~~~~~~~~--~------~~~~--~~~~~~vi~~s~~~~~~- 148 (350)
T cd03785 83 KILKKFKP--DVVVGFGGYVS-GPVGLAAKLLGIPLVIHEQNAVPGL--A------NRLL--ARFADRVALSFPETAKY- 148 (350)
T ss_pred HHHHhcCC--CEEEECCCCcc-hHHHHHHHHhCCCEEEEcCCCCccH--H------HHHH--HHhhCEEEEcchhhhhc-
Confidence 44555566 89999976543 3334444455677776555555421 0 1111 12257766655432211
Q ss_pred HHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCcccc
Q 004314 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIF 348 (761)
Q Consensus 272 l~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~ 348 (761)
+ ...++.++|+|+|.+.+.+.. . ++++ +++++++.+++....
T Consensus 149 ----------------------~--~~~~~~~i~n~v~~~~~~~~~-------~----~~~~~~~~~~~~i~~~~g~~~~ 193 (350)
T cd03785 149 ----------------------F--PKDKAVVTGNPVREEILALDR-------E----RARLGLRPGKPTLLVFGGSQGA 193 (350)
T ss_pred ----------------------C--CCCcEEEECCCCchHHhhhhh-------h----HHhcCCCCCCeEEEEECCcHhH
Confidence 0 113567789999987664310 0 2333 467788888887777
Q ss_pred CChHHHH-HHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHH
Q 004314 349 KGVDLKL-LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERA 427 (761)
Q Consensus 349 KGi~~~l-~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~ 427 (761)
|+...++ .|++.+.+ ++ +.++.+++ .+ +.+++++ .+++. + ..|++++ .+ +++.
T Consensus 194 ~~~~~~l~~a~~~l~~--~~----~~~~~i~G----~g-~~~~l~~----~~~~~----~----~~v~~~g-~~--~~~~ 247 (350)
T cd03785 194 RAINEAVPEALAELLR--KR----LQVIHQTG----KG-DLEEVKK----AYEEL----G----VNYEVFP-FI--DDMA 247 (350)
T ss_pred HHHHHHHHHHHHHhhc--cC----eEEEEEcC----Cc-cHHHHHH----HHhcc----C----CCeEEee-hh--hhHH
Confidence 8876654 77776642 22 33333332 22 3333433 33222 1 1366554 33 7999
Q ss_pred HHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCC----C----cccc---cCcEEECC
Q 004314 428 AYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----C----SPSL---SGAIRVNP 496 (761)
Q Consensus 428 aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~----~~~l---~~al~VnP 496 (761)
.+|+.||++|.+| | +.+.+|||+||. |+|++...| + ++.+ ..|+++++
T Consensus 248 ~~l~~ad~~v~~s---g-~~t~~Eam~~G~-----------------Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~ 306 (350)
T cd03785 248 AAYAAADLVISRA---G-ASTVAELAALGL-----------------PAILIPLPYAADDHQTANARALVKAGAAVLIPQ 306 (350)
T ss_pred HHHHhcCEEEECC---C-HhHHHHHHHhCC-----------------CEEEeecCCCCCCcHHHhHHHHHhCCCEEEEec
Confidence 9999999999876 3 578999999986 777765443 1 2334 23889998
Q ss_pred C--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHH
Q 004314 497 W--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVA 534 (761)
Q Consensus 497 ~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~ 534 (761)
. |.++++++|..++.. ++.++...++.++++..+...
T Consensus 307 ~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~ 345 (350)
T cd03785 307 EELTPERLAAALLELLSD-PERLKAMAEAARSLARPDAAE 345 (350)
T ss_pred CCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHhcCCCCHHH
Confidence 7 899999999999974 445555555667776655433
No 103
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.23 E-value=8.5e-11 Score=124.77 Aligned_cols=71 Identities=18% Similarity=0.220 Sum_probs=60.9
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC----CceEEccCCeEEeec
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK----KLGIAAEHGYFMRWS 665 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~----~l~liaehGa~ir~~ 665 (761)
.|+|++|+||||++. +...+++++++|++|.+ .|..|+++|||++..+.+.+..+. ...+|++||+.|...
T Consensus 3 ~kli~~DlDGTLl~~---~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 3 IKLIAIDMDGTLLLP---DHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKA 77 (270)
T ss_pred eEEEEEecCCcCcCC---CCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEEC
Confidence 689999999999983 45688999999999986 699999999999999988887652 135899999999863
No 104
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.21 E-value=1e-09 Score=121.58 Aligned_cols=252 Identities=14% Similarity=0.111 Sum_probs=147.9
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhh--hcCEEeeeC
Q 004314 187 KIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL--NADLIGFHT 264 (761)
Q Consensus 187 ~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll--~~DligF~t 264 (761)
..|++.+ +..+| |+|++|......+...+-.+..++|+++.-+-. -+.+.+. |+.+++.+.+. .+|++--.+
T Consensus 76 ~~l~~~l-~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 76 EGLEELL-LEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHHHH-HHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCC
Confidence 3455443 44466 899999654444433333334568887542211 1111111 12233323222 267777777
Q ss_pred HHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcC-CCeEEEe-e
Q 004314 265 FDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFE-GKTVLLG-V 342 (761)
Q Consensus 265 ~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vil~-V 342 (761)
....+++++ +|. ...+|.++++|+....+..... .....+++++. ++.+++. .
T Consensus 150 ~~~~~~l~~-----~G~---------------~~~~I~vign~~~d~~~~~~~~-----~~~~~~~~~~~~~~~~vl~~~ 204 (365)
T TIGR00236 150 EQAKDNLLR-----ENV---------------KADSIFVTGNTVIDALLTNVEI-----AYSSPVLSEFGEDKRYILLTL 204 (365)
T ss_pred HHHHHHHHH-----cCC---------------CcccEEEeCChHHHHHHHHHhh-----ccchhHHHhcCCCCCEEEEec
Confidence 777777653 232 2236788899963222221110 01133455553 3344444 4
Q ss_pred cCcc-ccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCC
Q 004314 343 DDMD-IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV 421 (761)
Q Consensus 343 dRld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v 421 (761)
.|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.+ +.+.++ . ...|.++ +++
T Consensus 205 hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~---~~~~~~----~--~~~v~~~-~~~ 263 (365)
T TIGR00236 205 HRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREP---LHKHLG----D--SKRVHLI-EPL 263 (365)
T ss_pred CchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHH---HHHHhC----C--CCCEEEE-CCC
Confidence 4643 45999999999999988888765 66554332 11 1222 222222 1 1246655 578
Q ss_pred CHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEc-CCCCCccccc-C-cEEECCCC
Q 004314 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS-EFIGCSPSLS-G-AIRVNPWN 498 (761)
Q Consensus 422 ~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l~-~-al~VnP~d 498 (761)
+..++..+|+.||+++.+| |.+..|||+||. |+|++ ..+|..+.+. + ++++ |.|
T Consensus 264 ~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~-----------------PvI~~~~~~~~~e~~~~g~~~lv-~~d 320 (365)
T TIGR00236 264 EYLDFLNLAANSHLILTDS-----GGVQEEAPSLGK-----------------PVLVLRDTTERPETVEAGTNKLV-GTD 320 (365)
T ss_pred ChHHHHHHHHhCCEEEECC-----hhHHHHHHHcCC-----------------CEEECCCCCCChHHHhcCceEEe-CCC
Confidence 8999999999999999888 456799999976 77875 5555555543 3 5566 579
Q ss_pred HHHHHHHHHHHHcCC
Q 004314 499 IEATAEAMHEAIQMN 513 (761)
Q Consensus 499 ~~~~A~ai~~aL~m~ 513 (761)
+++++++|.++++.+
T Consensus 321 ~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 321 KENITKAAKRLLTDP 335 (365)
T ss_pred HHHHHHHHHHHHhCh
Confidence 999999999999864
No 105
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.21 E-value=1.7e-10 Score=119.41 Aligned_cols=71 Identities=18% Similarity=0.133 Sum_probs=60.3
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeec
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWS 665 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~ 665 (761)
.|+|++|+||||++. +...+++++++|++|.+ .++.|+++|||+...+.+.+..++ +..+|++||+.+...
T Consensus 3 ~kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~ 74 (230)
T PRK01158 3 IKAIAIDIDGTITDK---DRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVG 74 (230)
T ss_pred eeEEEEecCCCcCCC---CCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEc
Confidence 589999999999973 45678999999999995 799999999999999888776542 246899999999875
No 106
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.18 E-value=3.6e-10 Score=117.19 Aligned_cols=157 Identities=17% Similarity=0.233 Sum_probs=100.2
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecCCcc-ee
Q 004314 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADEE-WQ 671 (761)
Q Consensus 594 I~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~~~~-w~ 671 (761)
||+|+||||++. +..++++++++|++|.+ .|..++++|||++..+.+++..++ +.++|++||+.+....+.. +.
T Consensus 1 i~~DlDGTLl~~---~~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLNS---DGKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCST---TSSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceecC---CCeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 789999999983 45588999999999997 699999999999999999998653 2589999999994432222 22
Q ss_pred ecCcCcCcchHHHHHHHHHHHhc--------CCCccEEEecC----------c---eEEEEcccC--CCC-------Cch
Q 004314 672 NCGQSVDFGWIQIAEPVMKLYTE--------STDGSYIEIKE----------S---ALVWHHRDA--DPG-------FGS 721 (761)
Q Consensus 672 ~~~~~~~~~w~~~v~~im~~y~~--------~t~Gs~iE~k~----------~---~l~~hyr~a--d~d-------~~~ 721 (761)
.. .+ .+.+..+++...+ ..++.|+.... . ......... ..+ ...
T Consensus 77 ~~---i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~ 150 (254)
T PF08282_consen 77 KP---ID---SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDP 150 (254)
T ss_dssp ES---B----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCH
T ss_pred hh---ee---ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccc
Confidence 21 12 2333344433221 22233333220 0 000000000 000 124
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEeCCeEEEEEeCCCCcCC
Q 004314 722 SQAKELLDHLESVLANEPAAVKSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 722 ~qa~el~~~L~~~l~~~~v~V~~G~~~vEV~p~gvnKG~ 760 (761)
.+..++.++|.+.+.+.-..+.++..++||.|+++|||.
T Consensus 151 ~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ 189 (254)
T PF08282_consen 151 EDLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGS 189 (254)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHH
T ss_pred hhhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHH
Confidence 566777888887765533455679999999999999984
No 107
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.17 E-value=3.1e-10 Score=119.59 Aligned_cols=70 Identities=16% Similarity=0.184 Sum_probs=60.3
Q ss_pred eEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecC
Q 004314 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSA 666 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~ 666 (761)
+|++|+||||++. +...+++++++|++|.+ .|..|+++|||++..+.+.+..+. +.++|++||+.+...+
T Consensus 1 li~~DlDGTLl~~---~~~i~~~~~~~i~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~ 71 (256)
T TIGR00099 1 LIFIDLDGTLLND---DHTISPSTKEALAKLRE-KGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQ 71 (256)
T ss_pred CEEEeCCCCCCCC---CCccCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCC
Confidence 6899999999983 45688999999999996 599999999999999999887653 3479999999998763
No 108
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.17 E-value=4e-10 Score=119.97 Aligned_cols=73 Identities=19% Similarity=0.207 Sum_probs=62.3
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC--CceEEccCCeEEeecC
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK--KLGIAAEHGYFMRWSA 666 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~--~l~liaehGa~ir~~~ 666 (761)
.+++|++|+||||++. +..++++++++|++|.+ .|..|+++|||+...+...+..+. ...+|++||+.|..+.
T Consensus 6 ~~~lI~~DlDGTLL~~---~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~ 80 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS---HTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDE 80 (271)
T ss_pred CCeEEEEeCccCCcCC---CCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecC
Confidence 4789999999999973 45678899999999995 699999999999999998887653 2469999999998763
No 109
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.16 E-value=3.9e-09 Score=118.38 Aligned_cols=270 Identities=11% Similarity=0.121 Sum_probs=155.3
Q ss_pred HHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHH
Q 004314 191 QRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARH 270 (761)
Q Consensus 191 ~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~ 270 (761)
.++++..+| |+|.++ +....+..+.+++..++|+.. .++-|-.. + ..+ --.+|.+-..+....+.
T Consensus 97 ~~~l~~~kP--DvVi~~-~p~~~~~~l~~~~~~~iP~~~-v~td~~~~------~---~w~--~~~~d~~~v~s~~~~~~ 161 (391)
T PRK13608 97 INLLIKEKP--DLILLT-FPTPVMSVLTEQFNINIPVAT-VMTDYRLH------K---NWI--TPYSTRYYVATKETKQD 161 (391)
T ss_pred HHHHHHhCc--CEEEEC-CcHHHHHHHHHhcCCCCCEEE-EeCCCCcc------c---ccc--cCCCCEEEECCHHHHHH
Confidence 344555677 788885 222233333333344677743 34433110 0 000 12478877777655544
Q ss_pred HHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCC-eEEEeecCcc
Q 004314 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGK-TVLLGVDDMD 346 (761)
Q Consensus 271 Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~-~vil~VdRld 346 (761)
+.+ .|.. ..+|.++++.|+. .|.... + ..++++++ +++ .+++++||+.
T Consensus 162 l~~-----~gi~---------------~~ki~v~GiPv~~-~f~~~~---~----~~~~~~~~~l~~~~~~ilv~~G~lg 213 (391)
T PRK13608 162 FID-----VGID---------------PSTVKVTGIPIDN-KFETPI---D----QKQWLIDNNLDPDKQTILMSAGAFG 213 (391)
T ss_pred HHH-----cCCC---------------HHHEEEECeecCh-Hhcccc---c----HHHHHHHcCCCCCCCEEEEECCCcc
Confidence 432 1321 1234445555553 333211 1 12334444 244 4567799999
Q ss_pred ccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHH
Q 004314 347 IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSER 426 (761)
Q Consensus 347 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el 426 (761)
..||+..+++++ ++..|+++ ++++++. ++ ++.+++.+. .+. ...|.++ +.+ +++
T Consensus 214 ~~k~~~~li~~~---~~~~~~~~----~vvv~G~----~~---~l~~~l~~~---~~~------~~~v~~~-G~~--~~~ 267 (391)
T PRK13608 214 VSKGFDTMITDI---LAKSANAQ----VVMICGK----SK---ELKRSLTAK---FKS------NENVLIL-GYT--KHM 267 (391)
T ss_pred cchhHHHHHHHH---HhcCCCce----EEEEcCC----CH---HHHHHHHHH---hcc------CCCeEEE-ecc--chH
Confidence 999999999875 34455544 6556531 22 222333322 221 1136554 444 579
Q ss_pred HHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc------cCcEEECCCCHH
Q 004314 427 AAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL------SGAIRVNPWNIE 500 (761)
Q Consensus 427 ~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l------~~al~VnP~d~~ 500 (761)
..+|+.||++|.. +.|++..|||+||. |+|++...+..+.- ..+.-+-+.|.+
T Consensus 268 ~~~~~~aDl~I~k----~gg~tl~EA~a~G~-----------------PvI~~~~~pgqe~~N~~~~~~~G~g~~~~~~~ 326 (391)
T PRK13608 268 NEWMASSQLMITK----PGGITISEGLARCI-----------------PMIFLNPAPGQELENALYFEEKGFGKIADTPE 326 (391)
T ss_pred HHHHHhhhEEEeC----CchHHHHHHHHhCC-----------------CEEECCCCCCcchhHHHHHHhCCcEEEeCCHH
Confidence 9999999999863 45889999999986 78887533222211 122223356999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHHHHhh
Q 004314 501 ATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCKDH 551 (761)
Q Consensus 501 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~~~~~ 551 (761)
+++++|.++++.+ ++++.+.++.+++...++...-++.+++.+...++-+
T Consensus 327 ~l~~~i~~ll~~~-~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 327 EAIKIVASLTNGN-EQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred HHHHHHHHHhcCH-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 9999999999865 4555566667888888888888888887776655443
No 110
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.15 E-value=2.8e-09 Score=117.51 Aligned_cols=252 Identities=13% Similarity=0.023 Sum_probs=143.5
Q ss_pred HHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcch--HHHHHHhhhcCEEeee
Q 004314 186 NKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVR--EEILKALLNADLIGFH 263 (761)
Q Consensus 186 N~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r--~~il~~ll~~DligF~ 263 (761)
...+.+.+.+. +| |+|++|++....++..+..+..++|+.++.|--.. .+ +..|+. +..+. -.+|.+-.-
T Consensus 77 ~~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s-~~--~~~~~~~~r~~~~--~~ad~~~~~ 148 (363)
T cd03786 77 LIGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS-FD--RGMPDEENRHAID--KLSDLHFAP 148 (363)
T ss_pred HHHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc-CC--CCCCchHHHHHHH--HHhhhccCC
Confidence 33444444444 66 89999987766565555555557888865542110 00 001111 11111 235665555
Q ss_pred CHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEecccc-CcccchhhhccchHHHHHHHHHHHc---CCCeEE
Q 004314 264 TFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGI-HMGQIESVLRLADKDWRVQELKQQF---EGKTVL 339 (761)
Q Consensus 264 t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GI-d~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vi 339 (761)
+....+++.+ .|. ...+|.++++++ |...+..... . ....++.+ .++.++
T Consensus 149 s~~~~~~l~~-----~G~---------------~~~kI~vign~v~d~~~~~~~~~-~-----~~~~~~~~~~~~~~~vl 202 (363)
T cd03786 149 TEEARRNLLQ-----EGE---------------PPERIFVVGNTMIDALLRLLELA-K-----KELILELLGLLPKKYIL 202 (363)
T ss_pred CHHHHHHHHH-----cCC---------------CcccEEEECchHHHHHHHHHHhh-c-----cchhhhhcccCCCCEEE
Confidence 5544444332 121 234677788774 5433322111 0 01112223 245577
Q ss_pred EeecCccc---cCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEE
Q 004314 340 LGVDDMDI---FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVF 416 (761)
Q Consensus 340 l~VdRld~---~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~ 416 (761)
+.++|+.. .||+..+++|++++.+. ++.++..+. ++.... +++.+.+.+.. -..|.+
T Consensus 203 v~~~r~~~~~~~k~~~~l~~al~~l~~~------~~~vi~~~~-----~~~~~~----l~~~~~~~~~~-----~~~v~~ 262 (363)
T cd03786 203 VTLHRVENVDDGEQLEEILEALAELAEE------DVPVVFPNH-----PRTRPR----IREAGLEFLGH-----HPNVLL 262 (363)
T ss_pred EEeCCccccCChHHHHHHHHHHHHHHhc------CCEEEEECC-----CChHHH----HHHHHHhhccC-----CCCEEE
Confidence 78999875 79999999999987532 233444332 222233 33444433210 124665
Q ss_pred EcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc-cCcEEEC
Q 004314 417 IDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRVN 495 (761)
Q Consensus 417 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~Vn 495 (761)
+ +....+++..+|+.||++|.+|- | +..|+|+||. |+|++...+..+.+ ..|+-+.
T Consensus 263 ~-~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~-----------------PvI~~~~~~~~~~~~~~g~~~~ 319 (363)
T cd03786 263 I-SPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLGV-----------------PVLNLRDRTERPETVESGTNVL 319 (363)
T ss_pred E-CCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCC-----------------CEEeeCCCCccchhhheeeEEe
Confidence 5 45678899999999999999984 4 4699999976 78887655544444 4444443
Q ss_pred C-CCHHHHHHHHHHHHcCCH
Q 004314 496 P-WNIEATAEAMHEAIQMNE 514 (761)
Q Consensus 496 P-~d~~~~A~ai~~aL~m~~ 514 (761)
+ .|+++++++|.++++.+.
T Consensus 320 ~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 320 VGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred cCCCHHHHHHHHHHHhcCch
Confidence 3 379999999999998764
No 111
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.15 E-value=1.4e-09 Score=119.14 Aligned_cols=180 Identities=16% Similarity=0.125 Sum_probs=116.0
Q ss_pred EEeccccCcccchhhhccchHHHHHHHHHHHc-CCCeEEEeecCccccCChHHH-HHHHHHHHHhCCCCcCceeEEEEec
Q 004314 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDMDIFKGVDLK-LLAMEHLLKQHPKWQGRAVLVQIAN 379 (761)
Q Consensus 302 ~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~-l~A~~~ll~~~P~~~~~vvLvqi~~ 379 (761)
.++|+|+|...+.+. .. ..++ .+ +++++|++++|....|++... +.|++++.+. +++ ++.+++
T Consensus 153 ~~i~n~v~~~~~~~~----~~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP----VP---RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhccc----ch---hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEECC
Confidence 578999987655321 00 1111 12 467789999998888987654 4788777542 222 333442
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCC
Q 004314 380 PARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGV 459 (761)
Q Consensus 380 p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~ 459 (761)
+++ .+ ++++.+.+.+ ...++.+. ..++..+|+.||++|.+| | +.+.+|||+||.
T Consensus 218 ----~~~-~~----~l~~~~~~~~-------l~~~v~~~----~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~-- 271 (348)
T TIGR01133 218 ----KND-LE----KVKNVYQELG-------IEAIVTFI----DENMAAAYAAADLVISRA---G-ASTVAELAAAGV-- 271 (348)
T ss_pred ----cch-HH----HHHHHHhhCC-------ceEEecCc----ccCHHHHHHhCCEEEECC---C-hhHHHHHHHcCC--
Confidence 222 12 3344443322 12233332 227899999999999865 4 689999999986
Q ss_pred CCCCCCCCCCCCCCceEEEcCCCCCc-------ccc---cCcEEECCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHhhH
Q 004314 460 SGSESSSESSAPKKSMLVVSEFIGCS-------PSL---SGAIRVNPWN--IEATAEAMHEAIQMNEAEKQLRHEKHYRY 527 (761)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~~-------~~l---~~al~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 527 (761)
|+|++.+.|.. +.+ ..|++++|.| +++++++|.++++. ++.++.+.++.+++
T Consensus 272 ---------------Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~ 335 (348)
T TIGR01133 272 ---------------PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAARKL 335 (348)
T ss_pred ---------------CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhc
Confidence 88887765522 334 2488898876 99999999999975 44566666678888
Q ss_pred HhhCCHHHHHH
Q 004314 528 VSTHDVAYWAR 538 (761)
Q Consensus 528 v~~~~~~~Wa~ 538 (761)
+.++...++++
T Consensus 336 ~~~~~~~~i~~ 346 (348)
T TIGR01133 336 AKPDAAKRIAE 346 (348)
T ss_pred CCccHHHHHHh
Confidence 88776666654
No 112
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.13 E-value=7e-10 Score=113.83 Aligned_cols=72 Identities=19% Similarity=0.164 Sum_probs=61.9
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSA 666 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~ 666 (761)
.|+|++|+||||++ .+...+++++++|++|.+ ++..|+++|||++..+.+.+..++ +..+|++||+.+...+
T Consensus 1 ik~v~~DlDGTLl~---~~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~ 73 (215)
T TIGR01487 1 IKLVAIDIDGTLTE---PNRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNK 73 (215)
T ss_pred CcEEEEecCCCcCC---CCcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCC
Confidence 37999999999997 355688999999999986 799999999999999999877653 2468999999999864
No 113
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.11 E-value=4.5e-10 Score=115.67 Aligned_cols=69 Identities=16% Similarity=0.126 Sum_probs=57.6
Q ss_pred eEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-C-ceEEccCCeEEeec
Q 004314 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-K-LGIAAEHGYFMRWS 665 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~-l~liaehGa~ir~~ 665 (761)
+|++|+||||++. +...+++++++|++|.+ .+..|+++|||+...+..++..+. + ..+||+||+.|+..
T Consensus 1 ~i~~DlDGTLL~~---~~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~ 71 (221)
T TIGR02463 1 WVFSDLDGTLLDS---HSYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLE 71 (221)
T ss_pred CEEEeCCCCCcCC---CCCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcC
Confidence 5899999999973 33355569999999985 689999999999999999987653 2 46999999999875
No 114
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.09 E-value=6.2e-10 Score=115.97 Aligned_cols=152 Identities=14% Similarity=0.182 Sum_probs=93.2
Q ss_pred eEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC---CceEEccCCeEEeecCC--
Q 004314 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK---KLGIAAEHGYFMRWSAD-- 667 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~---~l~liaehGa~ir~~~~-- 667 (761)
||++||||||++. +...++.. .+|+ + .++++.++++|||+...+.+.+..+. ...+|++||+.|+.+..
T Consensus 1 li~~DlDgTLl~~---~~~~~~~~-~~~~-~-~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~ 74 (236)
T TIGR02471 1 LIITDLDNTLLGD---DEGLASFV-ELLR-G-SGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQ 74 (236)
T ss_pred CeEEeccccccCC---HHHHHHHH-HHHH-h-cCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCC
Confidence 6899999999983 33344444 7776 4 45789999999999999999987652 12389999999976531
Q ss_pred --cceeecCcCcCcchHHHHHHHHHHHhcCCCccEEEecCc--eEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCcEE-
Q 004314 668 --EEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKES--ALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAV- 742 (761)
Q Consensus 668 --~~w~~~~~~~~~~w~~~v~~im~~y~~~t~Gs~iE~k~~--~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~V- 742 (761)
..|.. .....|.. ..+ ..+....+|..++.+.. ...++++..+... ....++.+.+... ...+.+
T Consensus 75 ~~~~~~~---~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~l~~~--~~~~~~~ 144 (236)
T TIGR02471 75 PDRFWQK---HIDHDWRR--QAV-VEALADIPGLTLQDDQEQGPFKISYLLDPEGE--PILPQIRQRLRQQ--SQAAKVI 144 (236)
T ss_pred CChhHHH---HHhcCCCH--HHH-HHHHhcCCCcEeCChhcCCCeeEEEEECcccc--hHHHHHHHHHHhc--cCCEEEE
Confidence 11210 01112221 122 23334567777776652 3556666432221 1233444444432 123443
Q ss_pred EeCCeEEEEEeCCCCcCC
Q 004314 743 KSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 743 ~~G~~~vEV~p~gvnKG~ 760 (761)
.++..++|+.|+++|||.
T Consensus 145 ~~~~~~~ei~~~~~~K~~ 162 (236)
T TIGR02471 145 LSCGWFLDVLPLRASKGL 162 (236)
T ss_pred EECCceEEEeeCCCChHH
Confidence 567788999999999985
No 115
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.06 E-value=2.5e-09 Score=113.50 Aligned_cols=71 Identities=18% Similarity=0.265 Sum_probs=61.1
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeec
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWS 665 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~ 665 (761)
.|+|++|+||||++ .+...+++++++|++|.+ +|..|+++|||++..+.+.+..+. +..+|++||+.++..
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~ 74 (272)
T PRK10530 3 YRVIALDLDGTLLT---PKKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDY 74 (272)
T ss_pred ccEEEEeCCCceEC---CCCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEec
Confidence 68999999999997 345678899999999996 699999999999999988887653 345899999999864
No 116
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.06 E-value=1.2e-09 Score=112.49 Aligned_cols=69 Identities=20% Similarity=0.209 Sum_probs=58.7
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecC
Q 004314 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSA 666 (761)
Q Consensus 594 I~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~ 666 (761)
|++|+||||++. ....+++++++|++|.+ .+..|+++|||+...+.+++..+. ...+|++||+.+...+
T Consensus 1 i~~DlDGTLl~~---~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~ 70 (225)
T TIGR01482 1 IASDIDGTLTDP---NRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNE 70 (225)
T ss_pred CeEeccCccCCC---CcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCC
Confidence 689999999983 45678999999999986 699999999999999888876554 4579999999998764
No 117
>PLN02887 hydrolase family protein
Probab=99.05 E-value=2.8e-09 Score=123.67 Aligned_cols=73 Identities=16% Similarity=0.152 Sum_probs=60.4
Q ss_pred ccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC---Cc-------eEEccC
Q 004314 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK---KL-------GIAAEH 658 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~---~l-------~liaeh 658 (761)
.+.|+|++|+||||++ .++..+++++++|++|.+ .|..|+|+|||++..+.+.+..+. .. .+|+.|
T Consensus 306 ~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl~e-kGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~N 381 (580)
T PLN02887 306 PKFSYIFCDMDGTLLN---SKSQISETNAKALKEALS-RGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQ 381 (580)
T ss_pred cCccEEEEeCCCCCCC---CCCccCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeec
Confidence 3689999999999998 356789999999999996 699999999999999988886542 11 355679
Q ss_pred CeEEeec
Q 004314 659 GYFMRWS 665 (761)
Q Consensus 659 Ga~ir~~ 665 (761)
|+.|+..
T Consensus 382 GA~I~d~ 388 (580)
T PLN02887 382 GLLVYGR 388 (580)
T ss_pred CeEEEEC
Confidence 9999854
No 118
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.05 E-value=1.1e-07 Score=111.46 Aligned_cols=182 Identities=14% Similarity=0.143 Sum_probs=120.3
Q ss_pred CCCeEEEeecCccccCChHHHHHHHHHHHH--hCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLK--QHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~ 411 (761)
++..++..|.|+...||+.+++.+++++++ ++|+. .+.+|..|.....+. .-.++.+.+.+++++ ..|. +
T Consensus 387 pd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~-~gk~~i~~i~~la~~--~~~~--~- 458 (601)
T TIGR02094 387 PDVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADG-EGKEIIQRIVEFSKR--PEFR--G- 458 (601)
T ss_pred CCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccc-hHHHHHHHHHHHHhc--ccCC--C-
Confidence 356688899999999999999999999985 55652 366776665432221 123455566666543 0121 1
Q ss_pred ccEEEEcCCCCHHHHHHHHHhccccee-ccc-ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc-
Q 004314 412 EPVVFIDKPVTLSERAAYYTIAECVVV-TAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL- 488 (761)
Q Consensus 412 ~pV~~~~~~v~~~el~aly~~ADv~vv-tS~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 488 (761)
.|+|+. ..+..--..+|+.||+++. ||. .|.-|+.-+-||.- |.|-.|-.-|...+.
T Consensus 459 -kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n------------------GgL~~sv~DG~~~E~~ 518 (601)
T TIGR02094 459 -RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN------------------GVLNLSILDGWWGEGY 518 (601)
T ss_pred -CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc------------------CCceeecccCcccccC
Confidence 477775 4566666778999999999 777 89999999888884 345566566654443
Q ss_pred --cCcEEECC------------CCHHHHHHHHHHHHc-----CCH----HHHHHHHHH-HhhHHhhCCHHHHHHHHHHH
Q 004314 489 --SGAIRVNP------------WNIEATAEAMHEAIQ-----MNE----AEKQLRHEK-HYRYVSTHDVAYWARSFFQD 543 (761)
Q Consensus 489 --~~al~VnP------------~d~~~~A~ai~~aL~-----m~~----~er~~r~~~-~~~~v~~~~~~~Wa~~~l~~ 543 (761)
.+|+.+.+ .|.+++-++|.+++- .++ .+...++++ |..-...+++.+-++.|...
T Consensus 519 ~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 519 DGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred CCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 24788875 899999999988772 211 123333333 22223357888888877654
No 119
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.04 E-value=2.3e-09 Score=113.08 Aligned_cols=71 Identities=13% Similarity=0.041 Sum_probs=57.8
Q ss_pred eEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecCC
Q 004314 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSAD 667 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~~ 667 (761)
+|++|+||||+... ....++++++|++|.+ .+..|+++|||+...+.+++..+. .-++|++||+.+...++
T Consensus 1 li~~DlDGTll~~~---~~~~~~~~~~i~~l~~-~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~ 72 (256)
T TIGR01486 1 WIFTDLDGTLLDPH---GYDWGPAKEVLERLQE-LGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRG 72 (256)
T ss_pred CEEEcCCCCCcCCC---CcCchHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCC
Confidence 68999999999743 3233468999999986 699999999999999999887653 24799999999987643
No 120
>PLN02382 probable sucrose-phosphatase
Probab=99.02 E-value=1.8e-09 Score=121.38 Aligned_cols=161 Identities=15% Similarity=0.147 Sum_probs=97.6
Q ss_pred HhccceeEEecCCCcCCCCCCCCCCCC-HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhh---ccCC-CCceEEccCCeE
Q 004314 587 LRSKSRAILFDYDGTVMPQTSINKAPS-QAVISIINTLCNDARNTVFVVSGRGRDCLGKW---FSPC-KKLGIAAEHGYF 661 (761)
Q Consensus 587 ~~s~~rlI~lDyDGTL~~~~~~~~~p~-~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~---f~~~-~~l~liaehGa~ 661 (761)
..+.+.+|++|+||||++.. .++..+ .++..+++++.+ ++..++++|||+.....+. |... |++ +|+.||+.
T Consensus 5 ~~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~-~I~~nGt~ 81 (413)
T PLN02382 5 SGSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLLTPDI-TIMSVGTE 81 (413)
T ss_pred cCCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCCCCCE-EEEcCCcE
Confidence 45668899999999999743 122344 445555588775 6889999999995555444 4432 443 56679999
Q ss_pred EeecC----CcceeecCcCcCcchH-HHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhc
Q 004314 662 MRWSA----DEEWQNCGQSVDFGWI-QIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLA 736 (761)
Q Consensus 662 ir~~~----~~~w~~~~~~~~~~w~-~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~ 736 (761)
|...+ +..|... .+..|. ..+.+.+..|.........+++...+.+++.+. .+.++.+.|.+.+.
T Consensus 82 I~~~~~~~~d~~w~~~---l~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~-------~~~~~~~~l~~~~~ 151 (413)
T PLN02382 82 IAYGESMVPDHGWVEY---LNKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK-------KAQEVIKELSERLE 151 (413)
T ss_pred EEeCCCCccChhHHHH---HhccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH-------HhHHHHHHHHHHHH
Confidence 98743 1223321 223454 223333444432233445555667777765432 22344555555543
Q ss_pred C--CCcEE-EeCCeEEEEEeCCCCcCC
Q 004314 737 N--EPAAV-KSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 737 ~--~~v~V-~~G~~~vEV~p~gvnKG~ 760 (761)
. ..+.+ .+|..++||.|+++|||.
T Consensus 152 ~~g~~~~i~~s~~~~ldI~p~g~sKg~ 178 (413)
T PLN02382 152 KRGLDVKIIYSGGIDLDVLPQGAGKGQ 178 (413)
T ss_pred hcCCcEEEEEECCcEEEEEeCCCCHHH
Confidence 3 23444 578899999999999984
No 121
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=98.93 E-value=2.3e-09 Score=100.97 Aligned_cols=128 Identities=21% Similarity=0.259 Sum_probs=89.8
Q ss_pred CeEEEeecCccccCChHHHHH-HHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004314 336 KTVLLGVDDMDIFKGVDLKLL-AMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (761)
Q Consensus 336 ~~vil~VdRld~~KGi~~~l~-A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV 414 (761)
..++++.|++...||+..+++ |++++.+++|+++ |+++|. +++ +++++ + ...|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~-----~~~------~l~~~----~-------~~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGN-----GPD------ELKRL----R-------RPNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECE-----SS-------HHCCH----H-------HCTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeC-----CHH------HHHHh----c-------CCCE
Confidence 357889999999999999999 9999999999755 887775 222 12222 1 1247
Q ss_pred EEEcCCCCHHHHHHHHHhcccceeccc-ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---C
Q 004314 415 VFIDKPVTLSERAAYYTIAECVVVTAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---G 490 (761)
Q Consensus 415 ~~~~~~v~~~el~aly~~ADv~vvtS~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 490 (761)
.+.+ .+ +|+.++|+.||+++.|+. .+|++...+|||++|. |+|+|.. |+...+. .
T Consensus 56 ~~~g-~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~-----------------pvi~~~~-~~~~~~~~~~~ 114 (135)
T PF13692_consen 56 RFHG-FV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGK-----------------PVIASDN-GAEGIVEEDGC 114 (135)
T ss_dssp EEE--S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT-------------------EEEEHH-HCHCHS---SE
T ss_pred EEcC-CH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCC-----------------CEEECCc-chhhheeecCC
Confidence 7654 55 689999999999999985 7899999999999976 8999888 5555552 3
Q ss_pred cEEECCCCHHHHHHHHHHHHc
Q 004314 491 AIRVNPWNIEATAEAMHEAIQ 511 (761)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~ 511 (761)
++.+ +.|+++++++|.+++.
T Consensus 115 ~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 115 GVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp EEE--TT-HHHHHHHHHHHHH
T ss_pred eEEE-CCCHHHHHHHHHHHhc
Confidence 6666 8899999999999885
No 122
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.93 E-value=6.7e-08 Score=107.51 Aligned_cols=141 Identities=16% Similarity=0.166 Sum_probs=92.9
Q ss_pred HHHHHcC---CCeE-EEe-ecCccccCC-hHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 004314 328 ELKQQFE---GKTV-LLG-VDDMDIFKG-VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKR 401 (761)
Q Consensus 328 ~lr~~~~---~~~v-il~-VdRld~~KG-i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~ 401 (761)
.++++++ ++++ ++. -.|....|+ +...++|++.+.+++|+++ +++++. +++.. +++++++.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~----~~~~~----~~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLV----NPKRR----EQIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecC----ChhhH----HHHHHHHhh
Confidence 3445552 4444 333 347766544 6888999999988888754 666653 12222 333444332
Q ss_pred HhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEc--
Q 004314 402 INETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS-- 479 (761)
Q Consensus 402 in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~S-- 479 (761)
.. | . .+.++. .++..+|+.||+++++| |.+.+|+|+||. |+|++
T Consensus 243 ~~---~---~-~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~-----------------PvI~~~~ 288 (380)
T PRK00025 243 YA---G---L-EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLKV-----------------PMVVGYK 288 (380)
T ss_pred cC---C---C-CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhCC-----------------CEEEEEc
Confidence 20 1 1 244443 37899999999999998 778889999986 77766
Q ss_pred ---------------CCCCCcccccC-----cEEECCCCHHHHHHHHHHHHcCCH
Q 004314 480 ---------------EFIGCSPSLSG-----AIRVNPWNIEATAEAMHEAIQMNE 514 (761)
Q Consensus 480 ---------------e~~G~~~~l~~-----al~VnP~d~~~~A~ai~~aL~m~~ 514 (761)
.+.|..+.+.+ .++++..|++++++++..+|+.++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~ 343 (380)
T PRK00025 289 VSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGA 343 (380)
T ss_pred cCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHH
Confidence 34454555532 366788899999999999998653
No 123
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.92 E-value=6.3e-09 Score=120.50 Aligned_cols=74 Identities=12% Similarity=0.086 Sum_probs=62.1
Q ss_pred ccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecC
Q 004314 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSA 666 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~ 666 (761)
.++|+|++|+||||++. +...+++++++|++|.+ .+..|+++|||+...+..++..+. +..+|++||+.|..+.
T Consensus 414 ~~~KLIfsDLDGTLLd~---d~~i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~ 488 (694)
T PRK14502 414 QFKKIVYTDLDGTLLNP---LTYSYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPK 488 (694)
T ss_pred ceeeEEEEECcCCCcCC---CCccCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECC
Confidence 36899999999999984 33456789999999996 699999999999999988887653 2469999999999864
No 124
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=98.89 E-value=1.3e-07 Score=103.78 Aligned_cols=251 Identities=12% Similarity=0.053 Sum_probs=143.2
Q ss_pred HHHHhCCCCCEEEEeCCccch--HHH-HHHH-hcCCCeEEEEEecCCCchhHHhcCc-chHHHHHHhhhcCEEeeeCHHH
Q 004314 193 VIEVINPEDDYVWIHDYHLMV--LPT-FLRR-RFTRLRMGFFLHSPFPSSEIYRTLP-VREEILKALLNADLIGFHTFDY 267 (761)
Q Consensus 193 i~~~~~~~~DiVwvhDyhl~l--lp~-~lr~-~~~~~~ig~flH~PfP~~e~fr~lp-~r~~il~~ll~~DligF~t~~~ 267 (761)
++..+++ +|+|++|..-+.. ++. ++++ +..++|+++++|--+|-. +.... ........+-.||.|..++...
T Consensus 58 ~~~~~~~-~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~ 134 (333)
T PRK09814 58 ILASLKP-GDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKM 134 (333)
T ss_pred HHhcCCC-CCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHH
Confidence 4444666 4999999754332 222 2222 112699999999877632 11111 1222334455789999999876
Q ss_pred HHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccc
Q 004314 268 ARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDI 347 (761)
Q Consensus 268 ~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~ 347 (761)
.+.+.+ .|.. ..++.++|+..+...... +....+++.|+++||+..
T Consensus 135 ~~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~i~yaG~l~k 180 (333)
T PRK09814 135 KDRLVE-----EGLT---------------TDKIIVQGIFDYLNDIEL--------------VKTPSFQKKINFAGNLEK 180 (333)
T ss_pred HHHHHH-----cCCC---------------cCceEecccccccccccc--------------cccccCCceEEEecChhh
Confidence 666542 1221 112333343322211100 011234568999999994
Q ss_pred cCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHH
Q 004314 348 FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERA 427 (761)
Q Consensus 348 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~ 427 (761)
..++ .+..|+. .|+++|. |++.. .. ...|.|. |.++.+|+.
T Consensus 181 ~~~l----------~~~~~~~----~l~i~G~-----g~~~~-----------~~--------~~~V~f~-G~~~~eel~ 221 (333)
T PRK09814 181 SPFL----------KNWSQGI----KLTVFGP-----NPEDL-----------EN--------SANISYK-GWFDPEELP 221 (333)
T ss_pred chHH----------HhcCCCC----eEEEECC-----Ccccc-----------cc--------CCCeEEe-cCCCHHHHH
Confidence 3321 1124544 4777763 32211 00 1247655 689999999
Q ss_pred HHHHhcccceecccc-----------cCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEE
Q 004314 428 AYYTIAECVVVTAVR-----------DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIR 493 (761)
Q Consensus 428 aly~~ADv~vvtS~~-----------EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~ 493 (761)
.+|+. |+++++.-. -.++--..||||||. |+|++..++.++.+. .|+.
T Consensus 222 ~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~-----------------PVI~~~~~~~~~~V~~~~~G~~ 283 (333)
T PRK09814 222 NELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGL-----------------PVIVWSKAAIADFIVENGLGFV 283 (333)
T ss_pred HHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCC-----------------CEEECCCccHHHHHHhCCceEE
Confidence 99998 666654321 223344778999986 999999999888883 3888
Q ss_pred ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHH
Q 004314 494 VNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (761)
Q Consensus 494 VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~ 542 (761)
|+ +.++++++|... ++++++++.++.++........+..+.-+.
T Consensus 284 v~--~~~el~~~l~~~---~~~~~~~m~~n~~~~~~~~~~g~~~~~~~~ 327 (333)
T PRK09814 284 VD--SLEELPEIIDNI---TEEEYQEMVENVKKISKLLRNGYFTKKALV 327 (333)
T ss_pred eC--CHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 88 688999998873 355555555555555544333444444333
No 125
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.88 E-value=7e-09 Score=110.54 Aligned_cols=72 Identities=11% Similarity=0.090 Sum_probs=60.3
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSA 666 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~ 666 (761)
.|+|++|+||||++. +...+++++++|++|.+ .+..|+|+|||+...+...+..+. .-+++++||+.|+.++
T Consensus 4 ~kli~~DlDGTLl~~---~~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~ 76 (273)
T PRK00192 4 KLLVFTDLDGTLLDH---HTYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPK 76 (273)
T ss_pred ceEEEEcCcccCcCC---CCcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecc
Confidence 689999999999983 34566889999999985 689999999999999888887653 2368999999998753
No 126
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.87 E-value=8.8e-09 Score=108.49 Aligned_cols=71 Identities=17% Similarity=0.141 Sum_probs=60.7
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeec
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWS 665 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~ 665 (761)
.|+||+|+||||++. ....++.++++|++|.+ .++.|+++|||.+..+..++..+. +..+|++||+.|..+
T Consensus 1 ~KLIftDLDGTLLd~---~~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p 72 (302)
T PRK12702 1 MRLVLSSLDGSLLDL---EFNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVP 72 (302)
T ss_pred CcEEEEeCCCCCcCC---CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEc
Confidence 479999999999983 44567889999999996 699999999999999988887652 236999999999876
No 127
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=98.85 E-value=1.4e-07 Score=99.50 Aligned_cols=182 Identities=16% Similarity=0.175 Sum_probs=133.5
Q ss_pred CCeEEEeecCccccCChHHHHHHHHHHHHhCCC--CcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004314 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPK--WQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412 (761)
Q Consensus 335 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~--~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~ 412 (761)
....+|+++.+.|.|+.. .|+-+...+.++|. .-.++.|+++| ..|+. +-++.-+.++.++++++-. .
T Consensus 268 r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRne--eD~ervk~Lkd~a~~L~i~------~ 337 (465)
T KOG1387|consen 268 RENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRNE--EDEERVKSLKDLAEELKIP------K 337 (465)
T ss_pred cceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCCh--hhHHHHHHHHHHHHhcCCc------c
Confidence 357899999999999999 77777777888887 33457787766 45543 3345556778888877643 2
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCc-ccc---
Q 004314 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS-PSL--- 488 (761)
Q Consensus 413 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~-~~l--- 488 (761)
.|.|. -.+|.+++..+|..|-+.|-+-..|-||+...||||+|. .+|+-.-+|.. +.+
T Consensus 338 ~v~F~-~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGl-----------------Ipi~h~SgGP~lDIV~~~ 399 (465)
T KOG1387|consen 338 HVQFE-KNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGL-----------------IPIVHNSGGPLLDIVTPW 399 (465)
T ss_pred ceEEE-ecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCc-----------------eEEEeCCCCCceeeeecc
Confidence 46654 589999999999999999999999999999999999975 22332333311 111
Q ss_pred c---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHH
Q 004314 489 S---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMER 546 (761)
Q Consensus 489 ~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~ 546 (761)
. .|++. | +.++-|++|.+++++..+||..+.+..+..+.++.-+...+.|...+..
T Consensus 400 ~G~~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 400 DGETTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred CCccceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 1 25665 3 5778999999999999988877777788888777766666666544443
No 128
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.79 E-value=3.3e-09 Score=111.36 Aligned_cols=156 Identities=16% Similarity=0.211 Sum_probs=92.9
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC----CCceEEccCCeEEeec
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC----KKLGIAAEHGYFMRWS 665 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~----~~l~liaehGa~ir~~ 665 (761)
+++||++|+||||++. +....+++.+.|+ ....++..++++|||+.+...+.+... | -.+|+++|+.|.+.
T Consensus 1 ~~~ll~sDlD~Tl~~~---~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~P-d~~I~svGt~I~~~ 75 (247)
T PF05116_consen 1 PPRLLASDLDGTLIDG---DDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQP-DYIITSVGTEIYYG 75 (247)
T ss_dssp -SEEEEEETBTTTBHC---HHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE--SEEEETTTTEEEES
T ss_pred CCEEEEEECCCCCcCC---CHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCC-CEEEecCCeEEEEc
Confidence 3689999999999921 1112345556666 333567888999999999988887642 3 34899999999984
Q ss_pred C----CcceeecCcCcCcchH-HHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCc
Q 004314 666 A----DEEWQNCGQSVDFGWI-QIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPA 740 (761)
Q Consensus 666 ~----~~~w~~~~~~~~~~w~-~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v 740 (761)
. +..|.. .....|. +.+++++..+..-.+..-.++..+.++|.+...+.. ..++.|+..+....+
T Consensus 76 ~~~~~d~~w~~---~i~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~~-------~~~~~i~~~l~~~~l 145 (247)
T PF05116_consen 76 ENWQPDEEWQA---HIDERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDSA-------DILEEIRARLRQRGL 145 (247)
T ss_dssp STTEE-HHHHH---HHHTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSHC-------HHHHHHHHHHHCCTC
T ss_pred CCCcChHHHHH---HHHhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccch-------hHHHHHHHHHHHcCC
Confidence 2 112332 1234565 556666666644333333344456777776654321 233445554444444
Q ss_pred --EE-EeCCeEEEEEeCCCCcCC
Q 004314 741 --AV-KSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 741 --~V-~~G~~~vEV~p~gvnKG~ 760 (761)
.+ .++...|+|.|+++|||.
T Consensus 146 ~~~~i~s~~~~ldilP~~a~K~~ 168 (247)
T PF05116_consen 146 RVNVIYSNGRDLDILPKGASKGA 168 (247)
T ss_dssp EEEEEECTCCEEEEEETT-SHHH
T ss_pred CeeEEEccceeEEEccCCCCHHH
Confidence 33 468889999999999984
No 129
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=98.75 E-value=8e-07 Score=102.81 Aligned_cols=255 Identities=13% Similarity=0.121 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHHH----hCCCCCEEE--EeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcc--hHHHHHH
Q 004314 182 YVSANKIFSQRVIEV----INPEDDYVW--IHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPV--REEILKA 253 (761)
Q Consensus 182 Y~~vN~~fa~~i~~~----~~~~~DiVw--vhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~--r~~il~~ 253 (761)
|...+..++..+-+. .. ++|++. .+.-|... +....|..++.+..|+ =+. |. -+..+..
T Consensus 203 f~~~~eLi~efl~~l~~~~~~-~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~~-------~~~~y~~~l~~ 269 (519)
T TIGR03713 203 YSNMDELIREKFQRYLKVEVK-DDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ERN-------RHHTYLDLYES 269 (519)
T ss_pred ECCHHHHHHHHHHHHHHhhCC-CCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Ccc-------cccchhhhhhC
Confidence 444445555544433 33 457777 66677665 3344444445555665 111 21 2456666
Q ss_pred hhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc
Q 004314 254 LLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF 333 (761)
Q Consensus 254 ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~ 333 (761)
+..+|.+...|.+-.+.... ++ +- .. ...+|..+|++.= +.... ..++.
T Consensus 270 ~~~~d~iIv~T~~q~~~l~~---~~-~~------------~~-~~~~v~~Ip~~~~--~~~~~------------~s~r~ 318 (519)
T TIGR03713 270 LSRADLIIVDREDIERLLEE---NY-RE------------NY-VEFDISRITPFDT--RLRLG------------QSQQL 318 (519)
T ss_pred hhhcCeEEEcCHHHHHHHHH---Hh-hh------------cc-cCCcceeeCccce--EEecC------------hhhcc
Confidence 77788777767554443321 11 10 00 1123445665533 11110 11334
Q ss_pred CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC---
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPG--- 410 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~--- 410 (761)
.++.|.+++||+ +.|-+...|+|+.++.+++|+.. |.+.|.. .+ .++.+.++++++++|..++...
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~-----~~-~~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYN-----ND-NDITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEec-----Cc-hhHHHHHHHHHHHHHhhhchhhhcc
Confidence 567788888899 99999999999999999999976 7766632 11 2345666777777766532210
Q ss_pred -------------------CccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCC
Q 004314 411 -------------------YEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAP 471 (761)
Q Consensus 411 -------------------~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~ 471 (761)
-...+.+.+..+..++.+.|.-|.++|.+|..|||+ ..+|||+.|.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~Gi-------------- 452 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGI-------------- 452 (519)
T ss_pred ccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCC--------------
Confidence 002344566677779999999999999999999999 9999999875
Q ss_pred CCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHcCCH
Q 004314 472 KKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNE 514 (761)
Q Consensus 472 ~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~ 514 (761)
|.| --|.++.+. +|++| .|.+++++||...|+.+.
T Consensus 453 ---PqI---nyg~~~~V~d~~NG~li--~d~~~l~~al~~~L~~~~ 490 (519)
T TIGR03713 453 ---PQI---NKVETDYVEHNKNGYII--DDISELLKALDYYLDNLK 490 (519)
T ss_pred ---Cee---ecCCceeeEcCCCcEEe--CCHHHHHHHHHHHHhCHH
Confidence 666 556677773 59999 699999999999999764
No 130
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.75 E-value=4.7e-08 Score=101.27 Aligned_cols=69 Identities=17% Similarity=0.179 Sum_probs=57.2
Q ss_pred eEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecC
Q 004314 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSA 666 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~ 666 (761)
+|++|+||||++. +. ..++++++|++|.+ .+..|+++|||+...+..++..+. .-++|++||+.|..+.
T Consensus 1 li~~DlDGTLl~~---~~-~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~ 70 (225)
T TIGR02461 1 VIFTDLDGTLLPP---GY-EPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPR 70 (225)
T ss_pred CEEEeCCCCCcCC---CC-CchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecC
Confidence 5899999999983 22 44579999999996 599999999999999988886653 2369999999998864
No 131
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=98.70 E-value=8.1e-06 Score=97.73 Aligned_cols=181 Identities=12% Similarity=0.077 Sum_probs=117.0
Q ss_pred eEEEeecCccccCChHHHHHHHHHHHH--hCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004314 337 TVLLGVDDMDIFKGVDLKLLAMEHLLK--QHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (761)
Q Consensus 337 ~vil~VdRld~~KGi~~~l~A~~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV 414 (761)
.+|.++.|+..-||..+++..+++|.+ .+|+ ..+.+|..|.....+. .-+++.+++.++++. .+|. + .|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~-~gK~iIk~i~~~a~~--p~~~--~--kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADE-PGKELIQEIVEFSRR--PEFR--G--RI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccch-HHHHHHHHHHHHHhC--cCCC--C--cE
Confidence 378889999999999999999999865 3454 2466776664332221 113444555555441 1221 1 58
Q ss_pred EEEcCCCCHHHHHHHHHhcccceeccc--ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc-c--
Q 004314 415 VFIDKPVTLSERAAYYTIAECVVVTAV--RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-S-- 489 (761)
Q Consensus 415 ~~~~~~v~~~el~aly~~ADv~vvtS~--~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~-- 489 (761)
+|+. ..+..--..+++.|||++.||. .|.-|+.-+-||.- |.|-+|-.-|...+- .
T Consensus 550 vfle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N------------------G~LnlSvlDGww~E~~~g~ 610 (778)
T cd04299 550 VFLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN------------------GGLNLSVLDGWWDEGYDGE 610 (778)
T ss_pred EEEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc------------------CCeeeecccCccccccCCC
Confidence 8775 4566667778999999999999 78888777777663 467788777765554 2
Q ss_pred CcEEECC------------CCHHHHHHHHHHHHc----CC-----HHHHHHHHHH-HhhHHhhCCHHHHHHHHHHHHH
Q 004314 490 GAIRVNP------------WNIEATAEAMHEAIQ----MN-----EAEKQLRHEK-HYRYVSTHDVAYWARSFFQDME 545 (761)
Q Consensus 490 ~al~VnP------------~d~~~~A~ai~~aL~----m~-----~~er~~r~~~-~~~~v~~~~~~~Wa~~~l~~l~ 545 (761)
+|..+.+ .|.+++-+.|.+.+. .. +.+...+++. +....-.+++.+-++.|+..+-
T Consensus 611 nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 611 NGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred CceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 4788877 455566666654443 10 1234444444 3333346888888888888775
No 132
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.68 E-value=2.6e-06 Score=97.15 Aligned_cols=300 Identities=16% Similarity=0.235 Sum_probs=147.0
Q ss_pred EEEEeCCccchHHHHHHHhcCCCeEEEEEecCCC-------chhHHhcCcc---hH-----------HHHHH-hhhcCEE
Q 004314 203 YVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFP-------SSEIYRTLPV---RE-----------EILKA-LLNADLI 260 (761)
Q Consensus 203 iVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP-------~~e~fr~lp~---r~-----------~il~~-ll~~Dli 260 (761)
+.+.|.+..-+-.-++|++.|++.-+|+.|-.-+ +.++|..|+. .+ -|-+. -..||..
T Consensus 146 iaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~AdvF 225 (633)
T PF05693_consen 146 IAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADVF 225 (633)
T ss_dssp EEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSEE
T ss_pred EEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCee
Confidence 5677877766666689999999999999996543 2233444441 11 11111 2334443
Q ss_pred eeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhcc----chHHHHHHHH-HHHc--
Q 004314 261 GFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRL----ADKDWRVQEL-KQQF-- 333 (761)
Q Consensus 261 gF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~----~~~~~~~~~l-r~~~-- 333 (761)
-.-+.--++ -|..+|+ |... .|.|||++.+.|.....- ....+++.++ +..|
T Consensus 226 TTVSeITa~----Ea~~LL~----------------r~pD-vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g 284 (633)
T PF05693_consen 226 TTVSEITAK----EAEHLLK----------------RKPD-VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYG 284 (633)
T ss_dssp EESSHHHHH----HHHHHHS----------------S--S-EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred eehhhhHHH----HHHHHhC----------------CCCC-EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 322221110 1122222 2222 257999999887643210 1123333332 3333
Q ss_pred -----CCCeEEEe-ecCccc-cCChHHHHHHHHHHHH---hCCCCcCceeEEEEecCCCCCchh---------HHHHHHH
Q 004314 334 -----EGKTVLLG-VDDMDI-FKGVDLKLLAMEHLLK---QHPKWQGRAVLVQIANPARGRGKD---------LEEIQAE 394 (761)
Q Consensus 334 -----~~~~vil~-VdRld~-~KGi~~~l~A~~~ll~---~~P~~~~~vvLvqi~~p~r~~~~~---------~~~l~~e 394 (761)
.++.++++ .||.++ .||++..|+|+.+|-. .... +.-|+..|-.|+....-. +.++++.
T Consensus 285 ~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~--~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t 362 (633)
T PF05693_consen 285 HYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGS--DKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDT 362 (633)
T ss_dssp ---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT---S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHH
T ss_pred cCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCC--CCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHH
Confidence 24566555 699995 8999999999998743 2211 222333344465442111 2223333
Q ss_pred HHHHHHHHhccc------CC---------------------------------------------------------CCC
Q 004314 395 IHATCKRINETF------GR---------------------------------------------------------PGY 411 (761)
Q Consensus 395 v~~lv~~in~~~------g~---------------------------------------------------------~~~ 411 (761)
+.++.++|..+- |. .+-
T Consensus 363 ~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~dr 442 (633)
T PF05693_consen 363 VDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDR 442 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-S
T ss_pred HHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCc
Confidence 333323221110 10 012
Q ss_pred ccEEEEcCCCCH------HHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCc
Q 004314 412 EPVVFIDKPVTL------SERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS 485 (761)
Q Consensus 412 ~pV~~~~~~v~~------~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (761)
..|+|....++. -+...+.+.+|++|+||.+|+.|.+|+|++|.+. |-|.|..+|..
T Consensus 443 VKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gV-----------------PsITTnLsGFG 505 (633)
T PF05693_consen 443 VKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGV-----------------PSITTNLSGFG 505 (633)
T ss_dssp EEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT-------------------EEEETTBHHH
T ss_pred eEEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCC-----------------ceeeccchhHH
Confidence 245555433332 3788899999999999999999999999999865 89999999865
Q ss_pred ccc--------cCcEEE-CC--CCH----HHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHH
Q 004314 486 PSL--------SGAIRV-NP--WNI----EATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (761)
Q Consensus 486 ~~l--------~~al~V-nP--~d~----~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~ 542 (761)
--+ ..|+.| += .|. +++|+.|.....++..+|.....+..+.-...+|.+...-|.+
T Consensus 506 ~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~ 577 (633)
T PF05693_consen 506 CWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEK 577 (633)
T ss_dssp HHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHH
T ss_pred HHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 322 135544 32 233 4566666777788877766555554444444566555444443
No 133
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.47 E-value=1.5e-05 Score=89.27 Aligned_cols=134 Identities=15% Similarity=0.075 Sum_probs=84.4
Q ss_pred CCeEEE--eecCccc-cCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004314 335 GKTVLL--GVDDMDI-FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (761)
Q Consensus 335 ~~~vil--~VdRld~-~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~ 411 (761)
++++|+ +.+|... .|+++..++|++.+.+++|+++ +++.+.+ +... +.++++.+..+ . +.
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~----~~~~----~~~~~~~~~~~----~-~~ 252 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVN----FKRR----LQFEQIKAEYG----P-DL 252 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCC----chhH----HHHHHHHHHhC----C-CC
Confidence 555543 4469887 7999999999999999888865 5443322 1111 22233333222 1 11
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEc------------
Q 004314 412 EPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS------------ 479 (761)
Q Consensus 412 ~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~S------------ 479 (761)
.|.++.+ +...+|++||++|.+| |.+.+|+|+||. |+|++
T Consensus 253 -~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~-----------------P~Vv~yk~~pl~~~~~~ 304 (385)
T TIGR00215 253 -QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKT-----------------PMVVGYRMKPLTFLIAR 304 (385)
T ss_pred -cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCC-----------------CEEEEEcCCHHHHHHHH
Confidence 3554533 3567999999999999 667779999987 44444
Q ss_pred -----CCCCCcccccC--c---EEECCCCHHHHHHHHHHHHcCC
Q 004314 480 -----EFIGCSPSLSG--A---IRVNPWNIEATAEAMHEAIQMN 513 (761)
Q Consensus 480 -----e~~G~~~~l~~--a---l~VnP~d~~~~A~ai~~aL~m~ 513 (761)
.+.+.+..+.+ + ++-+-.+++.+++++.++|+.+
T Consensus 305 ~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 305 RLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 13333333321 1 2224457899999999999877
No 134
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.39 E-value=0.00015 Score=79.94 Aligned_cols=301 Identities=19% Similarity=0.262 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCCc----cchHHHH--HHHhcCCCeEEEEEecC---------CCchhHHhcCcch
Q 004314 183 VSANKIFSQRVIEVINPEDDYVWIHDYH----LMVLPTF--LRRRFTRLRMGFFLHSP---------FPSSEIYRTLPVR 247 (761)
Q Consensus 183 ~~vN~~fa~~i~~~~~~~~DiVwvhDyh----l~llp~~--lr~~~~~~~ig~flH~P---------fP~~e~fr~lp~r 247 (761)
.+.+++|+- ......|++..||+|--- ...+|-. ||+++|+.++..+.=+| |+..-.-..+|..
T Consensus 32 ~r~~eRfg~-~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFGF-YKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhcc-cCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 456677761 122334667899999755 3344544 89999999998876555 2222222335532
Q ss_pred H-HHHHHh---hhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeE--------------------------------
Q 004314 248 E-EILKAL---LNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIG-------------------------------- 291 (761)
Q Consensus 248 ~-~il~~l---l~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~-------------------------------- 291 (761)
. -.++.. ...|++.|.-.+.=.|++..|.+. |+..---++.+.
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~ 189 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIPLVLVNARLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDA 189 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCCEEEEeeeechhhhHHHHHHHHHHHHHHHhcceeeecCHHHH
Confidence 2 122332 345666666666666666655431 111000000000
Q ss_pred ---EEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCC-CeEEEeecCccccCChHHHHHHHHHHHHhCCC
Q 004314 292 ---LEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEG-KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPK 367 (761)
Q Consensus 292 ---~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~ 367 (761)
...+.+. |.+.. +..... ...+........+|.++++ +++++..+. ...--...+.|+..|++++|+
T Consensus 190 ~Rf~~LGa~~--v~v~G---NlKfd~--~~~~~~~~~~~~~r~~l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~ 260 (419)
T COG1519 190 QRFRSLGAKP--VVVTG---NLKFDI--EPPPQLAAELAALRRQLGGHRPVWVAAST--HEGEEEIILDAHQALKKQFPN 260 (419)
T ss_pred HHHHhcCCcc--eEEec---ceeecC--CCChhhHHHHHHHHHhcCCCCceEEEecC--CCchHHHHHHHHHHHHhhCCC
Confidence 0011111 11111 111111 1123344566778888876 888888887 233334478899999999998
Q ss_pred CcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC-------CCccEEEEcCCCCHHHHHHHHHhccccee-c
Q 004314 368 WQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP-------GYEPVVFIDKPVTLSERAAYYTIAECVVV-T 439 (761)
Q Consensus 368 ~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~-------~~~pV~~~~~~v~~~el~aly~~ADv~vv-t 439 (761)
.. |+ ++ | +-++ =-..+++++++.|-+++.- ..++|.+.+ +.-|+..||++||++.| -
T Consensus 261 ~l----lI-lV-P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~D---tmGEL~l~y~~adiAFVGG 325 (419)
T COG1519 261 LL----LI-LV-P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGD---TMGELGLLYGIADIAFVGG 325 (419)
T ss_pred ce----EE-Ee-c---CChh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEe---cHhHHHHHHhhccEEEECC
Confidence 63 43 33 3 2333 2356778888877665321 122455443 37799999999999887 4
Q ss_pred cc--ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCC----CCcccc---cCcEEECCCCHHHHHHHHHHHH
Q 004314 440 AV--RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFI----GCSPSL---SGAIRVNPWNIEATAEAMHEAI 510 (761)
Q Consensus 440 S~--~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~----G~~~~l---~~al~VnP~d~~~~A~ai~~aL 510 (761)
|+ .-|-| ++|..+|+. |+|.-.++ -+.+.+ ++++.|+. .+.++++++..+
T Consensus 326 Slv~~GGHN--~LEpa~~~~-----------------pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v~~l~ 384 (419)
T COG1519 326 SLVPIGGHN--PLEPAAFGT-----------------PVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAVELLL 384 (419)
T ss_pred cccCCCCCC--hhhHHHcCC-----------------CEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHHHHhc
Confidence 44 34555 789999865 67755443 333333 24677775 788888888877
Q ss_pred cCCHHHHHHHHHHHhhHHhhC
Q 004314 511 QMNEAEKQLRHEKHYRYVSTH 531 (761)
Q Consensus 511 ~m~~~er~~r~~~~~~~v~~~ 531 (761)
+. +++|..+.++....|.++
T Consensus 385 ~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 385 AD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred CC-HHHHHHHHHHHHHHHHHh
Confidence 76 667777778888888766
No 135
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=98.17 E-value=4.7e-06 Score=73.44 Aligned_cols=87 Identities=18% Similarity=0.228 Sum_probs=71.2
Q ss_pred cceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-C--cEEECCCCHHHHHHHHHHHHc
Q 004314 435 CVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G--AIRVNPWNIEATAEAMHEAIQ 511 (761)
Q Consensus 435 v~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~--al~VnP~d~~~~A~ai~~aL~ 511 (761)
+++.|+..+|+++..+|+||||. |+|.+...++.+.+. + ++.++ |++++++++..+++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~-----------------~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~ 61 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGT-----------------PVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLE 61 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCC-----------------eEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHC
Confidence 46778888999999999999974 777777777777773 3 67777 99999999999999
Q ss_pred CCHHHHHHHHHHHhhHHh-hCCHHHHHHHHH
Q 004314 512 MNEAEKQLRHEKHYRYVS-THDVAYWARSFF 541 (761)
Q Consensus 512 m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l 541 (761)
.| ++++...++.+++|. .|++.+=++.++
T Consensus 62 ~~-~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 62 NP-EERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred CH-HHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 65 577777888899987 688877777665
No 136
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=98.09 E-value=3.8e-05 Score=76.75 Aligned_cols=72 Identities=24% Similarity=0.278 Sum_probs=56.2
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC--CCCceEEccCCeEEeecC
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP--CKKLGIAAEHGYFMRWSA 666 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~--~~~l~liaehGa~ir~~~ 666 (761)
-.++||+|+||||+|.. ... +....+|.+|. |.+..|+.+|...+..+..+-.. ++.+.+|||||+-|+.+.
T Consensus 6 ~~~lIFtDlD~TLl~~~-ye~---~pA~pv~~el~-d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 6 MPLLIFTDLDGTLLPHS-YEW---QPAAPVLLELK-DAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK 79 (274)
T ss_pred cceEEEEcccCcccCCC-CCC---CccchHHHHHH-HcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence 36899999999999932 222 34556777777 47999999999999876666554 466889999999999873
No 137
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.09 E-value=6e-06 Score=80.66 Aligned_cols=71 Identities=11% Similarity=0.147 Sum_probs=55.7
Q ss_pred eEEecCCCcCCCCCCC--------CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhH---HhhccC-------CCCceE
Q 004314 593 AILFDYDGTVMPQTSI--------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCL---GKWFSP-------CKKLGI 654 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~--------~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L---~~~f~~-------~~~l~l 654 (761)
++++|+||||+..... ....++.+.+++++|.+ .++.|+++|||+.... ++|+.. +|.-.+
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~l 79 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPV 79 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceE
Confidence 5899999999974310 14678999999999996 6999999999998876 477755 444578
Q ss_pred EccCCeEEee
Q 004314 655 AAEHGYFMRW 664 (761)
Q Consensus 655 iaehGa~ir~ 664 (761)
++.||+.+..
T Consensus 80 i~~~g~~~~~ 89 (157)
T smart00775 80 LLSPDRLFAA 89 (157)
T ss_pred EEcCCcchhh
Confidence 8899998854
No 138
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.04 E-value=4.6e-05 Score=74.92 Aligned_cols=166 Identities=16% Similarity=0.235 Sum_probs=111.0
Q ss_pred HHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC-C-CC-ceEEccCCeE
Q 004314 585 AYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP-C-KK-LGIAAEHGYF 661 (761)
Q Consensus 585 ~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~-~-~~-l~liaehGa~ 661 (761)
++++-..-|+++|.||||++ .....++++.+.|++|.+ +.++-+|-|-+.+-+.+-++. + .. -...+|||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 45566667999999999998 456788999999999885 788999999999988888863 2 21 2366999998
Q ss_pred EeecCCcceeecCcCcCcch------HHHHHHHHHHHhc----CCCccEEEecCceEEEE--cccCCCC----Cc-----
Q 004314 662 MRWSADEEWQNCGQSVDFGW------IQIAEPVMKLYTE----STDGSYIEIKESALVWH--HRDADPG----FG----- 720 (761)
Q Consensus 662 ir~~~~~~w~~~~~~~~~~w------~~~v~~im~~y~~----~t~Gs~iE~k~~~l~~h--yr~ad~d----~~----- 720 (761)
-+..+...-. ..-..| ++.+.-.+.+..+ ...|.+||-..-.+-.. =|+|..+ |.
T Consensus 80 ~yk~gk~~~~----Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk 155 (252)
T KOG3189|consen 80 AYKGGKLLSK----QSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKK 155 (252)
T ss_pred EeeCCcchhH----HHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhh
Confidence 7665432111 111223 2333334444333 34599999776554333 2444321 11
Q ss_pred hHHHHHHHHHHHHHhcCCCcEEE-eCCeEEEEEeCCCCcC
Q 004314 721 SSQAKELLDHLESVLANEPAAVK-SGQFIVEVKPQVYIQL 759 (761)
Q Consensus 721 ~~qa~el~~~L~~~l~~~~v~V~-~G~~~vEV~p~gvnKG 759 (761)
...-..+.+.|++.+++..+... -|+-.++|-|.||+|-
T Consensus 156 ~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKt 195 (252)
T KOG3189|consen 156 HKIREKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKT 195 (252)
T ss_pred hhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchh
Confidence 11123567888888888888764 5899999999999995
No 139
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=97.91 E-value=0.00012 Score=83.09 Aligned_cols=132 Identities=6% Similarity=0.119 Sum_probs=98.9
Q ss_pred cCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004314 333 FEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412 (761)
Q Consensus 333 ~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~ 412 (761)
..++.++++ + ...|+|+++|.++.|++. |=+ |..+- ...++.++ ++ | .
T Consensus 281 ~~~~~l~~t-----~----s~~I~~i~~Lv~~lPd~~----f~I-ga~te--------~s~kL~~L-~~----y-----~ 328 (438)
T TIGR02919 281 YRKQALILT-----N----SDQIEHLEEIVQALPDYH----FHI-AALTE--------MSSKLMSL-DK----Y-----D 328 (438)
T ss_pred CcccEEEEC-----C----HHHHHHHHHHHHhCCCcE----EEE-EecCc--------ccHHHHHH-Hh----c-----C
Confidence 345555655 1 899999999999999986 654 54321 11344444 22 2 3
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCC-CCcccccCc
Q 004314 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFI-GCSPSLSGA 491 (761)
Q Consensus 413 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~~a 491 (761)
.|+.+.+ +...++..+|..||+++.+|..||++++..||+..|. |++.=+.+ |..+.+..+
T Consensus 329 nvvly~~-~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~-----------------pI~afd~t~~~~~~i~~g 390 (438)
T TIGR02919 329 NVKLYPN-ITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNL-----------------LILGFEETAHNRDFIASE 390 (438)
T ss_pred CcEEECC-cChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCC-----------------cEEEEecccCCcccccCC
Confidence 4666654 4556799999999999999999999999999999765 66654443 555556678
Q ss_pred EEECCCCHHHHHHHHHHHHcCCH
Q 004314 492 IRVNPWNIEATAEAMHEAIQMNE 514 (761)
Q Consensus 492 l~VnP~d~~~~A~ai~~aL~m~~ 514 (761)
.++++.|+++|+++|.++|+.+.
T Consensus 391 ~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 391 NIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred ceecCCCHHHHHHHHHHHhcCHH
Confidence 89999999999999999999874
No 140
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.78 E-value=4.2e-05 Score=71.65 Aligned_cols=51 Identities=22% Similarity=0.272 Sum_probs=41.1
Q ss_pred eeEEecCCCcCCCCCC---CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHH
Q 004314 592 RAILFDYDGTVMPQTS---INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLG 643 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~---~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~ 643 (761)
|+|++|+||||+.... ....|.++++++|++|.+ .+..|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHH-CCCEEEEECCCCchhhh
Confidence 6899999999987431 113478999999999985 59999999999987543
No 141
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=97.68 E-value=0.00041 Score=70.33 Aligned_cols=143 Identities=14% Similarity=0.228 Sum_probs=91.9
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc-C-C-CC-ceEEccCCeEEeecCCcceeecCc-C-cCcchHHHHHHHH
Q 004314 616 VISIINTLCNDARNTVFVVSGRGRDCLGKWFS-P-C-KK-LGIAAEHGYFMRWSADEEWQNCGQ-S-VDFGWIQIAEPVM 689 (761)
Q Consensus 616 ~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~-~-~-~~-l~liaehGa~ir~~~~~~w~~~~~-~-~~~~w~~~v~~im 689 (761)
+.++|.+|.+ +..|.||||-++...++-+. . + .+ -.+.+|||...+..++..|..... . .+...++.+.-++
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 4678899985 79999999999998888884 2 2 22 358899999998887667764321 1 1122234444444
Q ss_pred HHHhc----CCCccEEEecCceEEEEc--ccCCCC----Cc----hHHH-HHHHHHHHHHhcCCCcEEEe-CCeEEEEEe
Q 004314 690 KLYTE----STDGSYIEIKESALVWHH--RDADPG----FG----SSQA-KELLDHLESVLANEPAAVKS-GQFIVEVKP 753 (761)
Q Consensus 690 ~~y~~----~t~Gs~iE~k~~~l~~hy--r~ad~d----~~----~~qa-~el~~~L~~~l~~~~v~V~~-G~~~vEV~p 753 (761)
++..+ ..-|.+||.....+.+.- |+|..+ |. .... +.+++.|.+.+.+..+.+.. |...+||-|
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp 158 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFP 158 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEcccc
Confidence 44332 235999999999998874 344211 11 1111 25777888888877788754 999999999
Q ss_pred CCCCcCC
Q 004314 754 QVYIQLR 760 (761)
Q Consensus 754 ~gvnKG~ 760 (761)
+|+||+.
T Consensus 159 ~GwDKty 165 (220)
T PF03332_consen 159 KGWDKTY 165 (220)
T ss_dssp TT-SGGG
T ss_pred CCccHHH
Confidence 9999974
No 142
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.36 E-value=0.00041 Score=73.54 Aligned_cols=75 Identities=13% Similarity=0.149 Sum_probs=56.0
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC--CC-ceEEccCCeEEeec
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC--KK-LGIAAEHGYFMRWS 665 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~--~~-l~liaehGa~ir~~ 665 (761)
..++|++|+||||.+........++.+.++|++|.+ .|..++|+|+++++...+.+..+ .. ...|..+|...+..
T Consensus 125 ~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~Lke-kGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~k 202 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKK-RGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEY 202 (301)
T ss_pred cceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCC
Confidence 468999999999998531111225999999999997 58999999999999887777643 22 23667777776553
No 143
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.34 E-value=0.00024 Score=65.71 Aligned_cols=70 Identities=16% Similarity=0.173 Sum_probs=53.4
Q ss_pred eEEecCCCcCCCCCCC-----CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC----CceEEccCCeEEe
Q 004314 593 AILFDYDGTVMPQTSI-----NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK----KLGIAAEHGYFMR 663 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~-----~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~----~l~liaehGa~ir 663 (761)
+++||+||||.+..+. ...+.+.+.+.|++|.+. +..++|+||+....++.++..+. --.++++++....
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 79 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIY 79 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhh
Confidence 5799999999986531 236788999999999974 88999999999999999987531 1235555555543
No 144
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=96.77 E-value=0.0027 Score=67.47 Aligned_cols=73 Identities=15% Similarity=0.112 Sum_probs=52.7
Q ss_pred cceeEEecCCCcCCCCCCCCCCC-CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC--CC-ceEEccCCeEEee
Q 004314 590 KSRAILFDYDGTVMPQTSINKAP-SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC--KK-LGIAAEHGYFMRW 664 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p-~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~--~~-l~liaehGa~ir~ 664 (761)
..++|++|+||||.+... ...+ ++.+.++|++|.+ .|..++|+|+.++..+...+... +. ...+.++|.....
T Consensus 127 ~~~~i~~D~D~TL~~~~~-~v~irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k 203 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEE-PVRIRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGE 203 (303)
T ss_pred eccEEEEecCCCccCCCC-ccccCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccc
Confidence 468999999999998531 1112 5899999999996 68999999988888777777643 22 2355556665544
No 145
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.57 E-value=0.0039 Score=58.71 Aligned_cols=55 Identities=15% Similarity=0.181 Sum_probs=42.2
Q ss_pred eeEEecCCCcCCCCC--CCCC-------CCCHHHHHHHHHHHhcCCCeEEEEcCC-ChhhHHhhcc
Q 004314 592 RAILFDYDGTVMPQT--SINK-------APSQAVISIINTLCNDARNTVFVVSGR-GRDCLGKWFS 647 (761)
Q Consensus 592 rlI~lDyDGTL~~~~--~~~~-------~p~~~~~~~L~~L~~d~~n~V~IvSGR-~~~~L~~~f~ 647 (761)
|+|++|+||||++.. .... .+.+.+.++|+.|.+ .+..++|+|++ ........+.
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~ 65 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLK 65 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHH
Confidence 689999999999862 1121 246799999999986 58999999999 6766655554
No 146
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.55 E-value=0.0031 Score=59.24 Aligned_cols=57 Identities=16% Similarity=0.266 Sum_probs=44.5
Q ss_pred eeEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCC--------hhhHHhhccCC
Q 004314 592 RAILFDYDGTVMPQTS-----INKAPSQAVISIINTLCNDARNTVFVVSGRG--------RDCLGKWFSPC 649 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~--------~~~L~~~f~~~ 649 (761)
|+|++|+||||++... ....+.+.+.++|+.|.+ .+..++|+|+++ .+.+.+.+..+
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~ 70 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEEL 70 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHHC
Confidence 6899999999995211 124567899999999985 589999999999 67777777643
No 147
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.41 E-value=0.0021 Score=68.09 Aligned_cols=50 Identities=14% Similarity=0.210 Sum_probs=39.9
Q ss_pred eeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhH
Q 004314 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCL 642 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L 642 (761)
|+|++|+||||.........+.+...++|++|.+ .+..|+++|||+....
T Consensus 2 k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~-~G~~~~~~Tn~~~~~~ 51 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRG-ASVKVRFVTNTTKESK 51 (257)
T ss_pred CEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHH-CCCeEEEEECCCCCCH
Confidence 6899999999997431112367799999999996 5999999999887753
No 148
>PRK10444 UMP phosphatase; Provisional
Probab=96.39 E-value=0.0021 Score=67.74 Aligned_cols=54 Identities=7% Similarity=0.165 Sum_probs=44.1
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
.+++++|+||||... ..+.+...+.|++|.+ .+..++++|||+......+...+
T Consensus 1 ~~~v~~DlDGtL~~~----~~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 1 IKNVICDIDGVLMHD----NVAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CcEEEEeCCCceEeC----CeeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHH
Confidence 378999999999973 2577899999999996 58999999999987666655443
No 149
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=96.36 E-value=0.37 Score=53.70 Aligned_cols=250 Identities=19% Similarity=0.220 Sum_probs=128.6
Q ss_pred CCCCCEEEEeCCcc--chHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHH
Q 004314 198 NPEDDYVWIHDYHL--MVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCC 275 (761)
Q Consensus 198 ~~~~DiVwvhDyhl--~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~ 275 (761)
+| |+|..=||.- +.+...+|++.+..|+.++. ++.+|.==++|-..++.....=++.| .+-..|..
T Consensus 82 ~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~~D~ll~if---PFE~~~y~-- 149 (373)
T PF02684_consen 82 KP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKYVDHLLVIF---PFEPEFYK-- 149 (373)
T ss_pred CC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHHHhheeECC---cccHHHHh--
Confidence 55 8888889873 36788999998888887753 23444333455555554322211222 11122221
Q ss_pred hhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc--CCCeEEEe--ecCccc-cCC
Q 004314 276 SRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLG--VDDMDI-FKG 350 (761)
Q Consensus 276 ~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~--VdRld~-~KG 350 (761)
+.| +-..|-|+. =+|.-... .. ....++.+ +++++|.- =+|-.. .+.
T Consensus 150 ----------~~g-~~~~~VGHP--------l~d~~~~~-----~~----~~~~~~~~l~~~~~iIaLLPGSR~~EI~rl 201 (373)
T PF02684_consen 150 ----------KHG-VPVTYVGHP--------LLDEVKPE-----PD----RAEAREKLLDPDKPIIALLPGSRKSEIKRL 201 (373)
T ss_pred ----------ccC-CCeEEECCc--------chhhhccC-----CC----HHHHHHhcCCCCCcEEEEeCCCCHHHHHHH
Confidence 111 113344442 12211110 11 11222222 34443332 266654 445
Q ss_pred hHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHH
Q 004314 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (761)
Q Consensus 351 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly 430 (761)
++..++|.+++.+++|+++ ++....+. . ..+.+.+.....+. +. ++..+ ..+....+
T Consensus 202 lP~~l~aa~~l~~~~p~l~----fvvp~a~~-----~---~~~~i~~~~~~~~~-----~~-~~~~~-----~~~~~~~m 258 (373)
T PF02684_consen 202 LPIFLEAAKLLKKQRPDLQ----FVVPVAPE-----V---HEELIEEILAEYPP-----DV-SIVII-----EGESYDAM 258 (373)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEecCCH-----H---HHHHHHHHHHhhCC-----CC-eEEEc-----CCchHHHH
Confidence 5888999999999999976 55443321 1 11223333322221 11 23322 34677789
Q ss_pred HhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccccCc-----EEECCCCHHHHHHH
Q 004314 431 TIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGA-----IRVNPWNIEATAEA 505 (761)
Q Consensus 431 ~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a-----l~VnP~d~~~~A~a 505 (761)
+.||+.+++| |.+.+|++..|.+....=+...+.---...+|-..+.|....+-|. ++-+--+++.++++
T Consensus 259 ~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~ 333 (373)
T PF02684_consen 259 AAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAE 333 (373)
T ss_pred HhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHH
Confidence 9999999998 7899999998763100000000000000011223455555444321 34456689999999
Q ss_pred HHHHHcCCHH
Q 004314 506 MHEAIQMNEA 515 (761)
Q Consensus 506 i~~aL~m~~~ 515 (761)
+...|..++.
T Consensus 334 ~~~ll~~~~~ 343 (373)
T PF02684_consen 334 LLELLENPEK 343 (373)
T ss_pred HHHHhcCHHH
Confidence 9999987653
No 150
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.28 E-value=0.0025 Score=68.26 Aligned_cols=50 Identities=14% Similarity=0.335 Sum_probs=38.9
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhh
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKW 645 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~ 645 (761)
.++|++|+||||... ..+-+.+.++|++|.+ .+..|+++|||+.....++
T Consensus 2 ~~~~~~D~DGtl~~~----~~~~~ga~e~l~~L~~-~g~~~~~~Tnns~~~~~~~ 51 (279)
T TIGR01452 2 AQGFIFDCDGVLWLG----ERVVPGAPELLDRLAR-AGKAALFVTNNSTKSRAEY 51 (279)
T ss_pred ccEEEEeCCCceEcC----CeeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHH
Confidence 478999999999873 2345569999999996 5899999999875544443
No 151
>PLN02645 phosphoglycolate phosphatase
Probab=96.23 E-value=0.0045 Score=67.38 Aligned_cols=53 Identities=13% Similarity=0.258 Sum_probs=42.5
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+.++|+||+||||... + .+-+...+.|++|.+ .+..++++|+|+.......+.
T Consensus 27 ~~~~~~~D~DGtl~~~---~-~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~~ 79 (311)
T PLN02645 27 SVETFIFDCDGVIWKG---D-KLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYGK 79 (311)
T ss_pred hCCEEEEeCcCCeEeC---C-ccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHHH
Confidence 4789999999999973 2 345778999999996 589999999999666555554
No 152
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=96.14 E-value=0.021 Score=59.93 Aligned_cols=85 Identities=26% Similarity=0.509 Sum_probs=59.3
Q ss_pred HHHHHHHHHhCC---CCCEEEEeCCccchHHHHHHHhcC------CCeEEEEEecC-----CCchhHHh--cCcch----
Q 004314 188 IFSQRVIEVINP---EDDYVWIHDYHLMVLPTFLRRRFT------RLRMGFFLHSP-----FPSSEIYR--TLPVR---- 247 (761)
Q Consensus 188 ~fa~~i~~~~~~---~~DiVwvhDyhl~llp~~lr~~~~------~~~ig~flH~P-----fP~~e~fr--~lp~r---- 247 (761)
.|+.++++.++. .-||||+||+|..++|.+||.... ++++.|++|.. ||. +.+. .+|+.
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~-~~~~~~gl~~~~~~~ 196 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPP-EDLKALGLPDEYFQN 196 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEG-GGGGCTT-GGGGS-S
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCH-HHHHHcCCCHHHhcc
Confidence 566666666542 349999999999999999998753 59999999964 332 2221 13321
Q ss_pred ----------HHHHHHhhhcCEEeeeCHHHHHHHHH
Q 004314 248 ----------EEILKALLNADLIGFHTFDYARHFLS 273 (761)
Q Consensus 248 ----------~~il~~ll~~DligF~t~~~~~~Fl~ 273 (761)
.-+-.|+..||.|..-++.|++.-++
T Consensus 197 ~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 197 LDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp TTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred ccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 13446689999999999999987654
No 153
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=96.11 E-value=0.0019 Score=62.81 Aligned_cols=58 Identities=16% Similarity=0.144 Sum_probs=40.5
Q ss_pred ceeEEecCCCcCCCCCC----CCCCCCHH-HH--HHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 591 SRAILFDYDGTVMPQTS----INKAPSQA-VI--SIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~----~~~~p~~~-~~--~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
.|++++|+||||+.... ....+..- +. .+|++|.+ .+..++|+||++...+.+.+..+
T Consensus 1 ~~~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~~~i~~Lk~-~G~~i~IvTn~~~~~~~~~l~~~ 65 (154)
T TIGR01670 1 IRLLILDVDGVLTDGKIYYTNNGEEIKAFNVRDGYGIRCALK-SGIEVAIITGRKAKLVEDRCKTL 65 (154)
T ss_pred CeEEEEeCceeEEcCeEEECCCCcEEEEEechhHHHHHHHHH-CCCEEEEEECCCCHHHHHHHHHc
Confidence 37999999999997321 11111110 10 27888885 58999999999999888888654
No 154
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=96.09 E-value=0.0061 Score=64.18 Aligned_cols=52 Identities=15% Similarity=0.289 Sum_probs=42.1
Q ss_pred eeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcC---CChhhHHhhccC
Q 004314 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSG---RGRDCLGKWFSP 648 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSG---R~~~~L~~~f~~ 648 (761)
|+|++|+||||.... . +-++..++|++|.+ .+..|+++|| |+...+.+.+..
T Consensus 2 ~~~~~D~DGtl~~~~---~-~i~~a~~~l~~l~~-~g~~~~~~Tnn~~r~~~~~~~~l~~ 56 (249)
T TIGR01457 2 KGYLIDLDGTMYKGK---E-RIPEAETFVHELQK-RDIPYLFVTNNSTRTPESVAEMLAS 56 (249)
T ss_pred CEEEEeCCCceEcCC---e-eCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 689999999999742 2 33478999999996 5899999985 888888877764
No 155
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.04 E-value=0.012 Score=61.53 Aligned_cols=63 Identities=24% Similarity=0.367 Sum_probs=47.1
Q ss_pred cccCCHHHHHHHHHhccceeEEecCCCcCCCCCC---CC-C---------------------------CCCHHHHHHHHH
Q 004314 574 FRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTS---IN-K---------------------------APSQAVISIINT 622 (761)
Q Consensus 574 f~~l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~---~~-~---------------------------~p~~~~~~~L~~ 622 (761)
..=.++++|.+.....+.-.|+||+||||+...+ .. . .|-+...++|+.
T Consensus 46 ~~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~ 125 (237)
T TIGR01672 46 IHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eeEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHH
Confidence 3346889999887776666999999999997554 11 1 122227888999
Q ss_pred HHhcCCCeEEEEcCC
Q 004314 623 LCNDARNTVFVVSGR 637 (761)
Q Consensus 623 L~~d~~n~V~IvSGR 637 (761)
|.+ .|..++|||+|
T Consensus 126 l~~-~G~~i~iVTnr 139 (237)
T TIGR01672 126 HQR-RGDAIFFVTGR 139 (237)
T ss_pred HHH-CCCEEEEEeCC
Confidence 886 58999999999
No 156
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=96.03 E-value=1 Score=49.82 Aligned_cols=273 Identities=15% Similarity=0.144 Sum_probs=142.4
Q ss_pred HhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCcc--chHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHh
Q 004314 177 SLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHL--MVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL 254 (761)
Q Consensus 177 ~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl--~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~l 254 (761)
..|..|.+.= +.+.+. +| |++..=|+-= ..+...+|+..|++|+.++. ++.+|.--|.|-..+..
T Consensus 69 ~llk~~~~~~----~~i~~~-kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV-----~PsVWAWr~~Ra~~i~~- 135 (381)
T COG0763 69 RLLKIRRELV----RYILAN-KP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYV-----SPSVWAWRPKRAVKIAK- 135 (381)
T ss_pred HHHHHHHHHH----HHHHhc-CC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEE-----CcceeeechhhHHHHHH-
Confidence 4566666433 333332 45 7888877762 36778999999999998753 23333222333222222
Q ss_pred hhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc-
Q 004314 255 LNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF- 333 (761)
Q Consensus 255 l~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~- 333 (761)
.+|++.--.+.... |.+ + .|.. ..|-|++ =.|.-.+.+. ....|+++
T Consensus 136 -~~D~lLailPFE~~-~y~---k-~g~~---------~~yVGHp--------l~d~i~~~~~---------r~~ar~~l~ 183 (381)
T COG0763 136 -YVDHLLAILPFEPA-FYD---K-FGLP---------CTYVGHP--------LADEIPLLPD---------REAAREKLG 183 (381)
T ss_pred -HhhHeeeecCCCHH-HHH---h-cCCC---------eEEeCCh--------hhhhcccccc---------HHHHHHHhC
Confidence 34554322221111 221 1 1211 2233432 1222222211 12245555
Q ss_pred ---CCCeEEEeec-C-ccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 004314 334 ---EGKTVLLGVD-D-MDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGR 408 (761)
Q Consensus 334 ---~~~~vil~Vd-R-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~ 408 (761)
..+.+.+-.| | =+...-.+..++|+++|.+++|+++ ++.=..+ ..++.++.+ ..+.-.
T Consensus 184 ~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~---~~~~~~----- 246 (381)
T COG0763 184 IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEE---ALKWEV----- 246 (381)
T ss_pred CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHH---Hhhccc-----
Confidence 3445544443 3 4556677888999999999999987 4432221 233333222 221111
Q ss_pred CCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEc---------
Q 004314 409 PGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS--------- 479 (761)
Q Consensus 409 ~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~S--------- 479 (761)
..+..+ +...+....+.+||+.+..| |.+.+|++.|+.+ +||.-
T Consensus 247 --~~~~~~----~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P----------------~Vv~Yk~~~it~~i 299 (381)
T COG0763 247 --AGLSLI----LIDGEKRKAFAAADAALAAS-----GTATLEAALAGTP----------------MVVAYKVKPITYFI 299 (381)
T ss_pred --cCceEE----ecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCC----------------EEEEEeccHHHHHH
Confidence 001111 23457888999999999998 7899999999862 22222
Q ss_pred -------CCCCCcccccCcEEE-----CCCCHHHHHHHHHHHHcCCH--HHHHHHHHHHhhHHhhCCHHHHHH
Q 004314 480 -------EFIGCSPSLSGAIRV-----NPWNIEATAEAMHEAIQMNE--AEKQLRHEKHYRYVSTHDVAYWAR 538 (761)
Q Consensus 480 -------e~~G~~~~l~~al~V-----nP~d~~~~A~ai~~aL~m~~--~er~~r~~~~~~~v~~~~~~~Wa~ 538 (761)
.+++....+-|-.+| .--.++.+|+++...+..+. ++.++....+++++.+..+..=+.
T Consensus 300 ak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA 372 (381)
T COG0763 300 AKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAA 372 (381)
T ss_pred HHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 233333333221212 11347899999999998762 233344555666666653444333
No 157
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.98 E-value=0.01 Score=58.58 Aligned_cols=49 Identities=16% Similarity=0.254 Sum_probs=36.7
Q ss_pred cceeEEecCCCcCCCCCCCCCC---------CCHHHHHHHHHHHhcCCCeEEEEcCCCh
Q 004314 590 KSRAILFDYDGTVMPQTSINKA---------PSQAVISIINTLCNDARNTVFVVSGRGR 639 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~---------p~~~~~~~L~~L~~d~~n~V~IvSGR~~ 639 (761)
+.|++++|+||||+...+.... +-+.+.++|++|.+ .+..++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDD-EGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 4689999999999974321111 34779999999985 5899999996554
No 158
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=95.96 E-value=0.005 Score=61.70 Aligned_cols=59 Identities=15% Similarity=0.133 Sum_probs=41.8
Q ss_pred cceeEEecCCCcCCCCC----CCCCCCCHHH---HHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 590 KSRAILFDYDGTVMPQT----SINKAPSQAV---ISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~----~~~~~p~~~~---~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
..|+|++|+||||+... .......... ...++.|.+ .+..++|+|||+...+.+.+..+
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~-~Gi~v~I~T~~~~~~v~~~l~~l 85 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLT-SGIEVAIITGRKSKLVEDRMTTL 85 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHc
Confidence 58999999999999741 1111111222 256677775 68999999999999988887654
No 159
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.37 E-value=0.063 Score=52.20 Aligned_cols=61 Identities=18% Similarity=0.222 Sum_probs=52.7
Q ss_pred HHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 586 YLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 586 y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
.++...|-|++|+|.||++.. +...++|+++-+..+.. .+..|+|+|-.....+..|...+
T Consensus 23 L~~~Gikgvi~DlDNTLv~wd--~~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 23 LKAHGIKGVILDLDNTLVPWD--NPDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred HHHcCCcEEEEeccCceeccc--CCCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhc
Confidence 345678999999999999975 55678999999999996 69999999999999999888754
No 160
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.27 E-value=0.67 Score=50.16 Aligned_cols=168 Identities=17% Similarity=0.174 Sum_probs=110.4
Q ss_pred CCeEEEeecCccccCChHHHHHHHHHHHHhCC-CCc--CceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004314 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHP-KWQ--GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (761)
Q Consensus 335 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P-~~~--~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~ 411 (761)
...++++--...+...+.-+|.|++..-++.- +-. -++ |.+|+ |.||..+.+.++|++. .|
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~l-lciIT----GKGPlkE~Y~~~I~~~-----------~~ 317 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSL-LCIIT----GKGPLKEKYSQEIHEK-----------NL 317 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcE-EEEEc----CCCchhHHHHHHHHHh-----------cc
Confidence 45688888889999999999999885422210 000 122 44454 3678777777776654 47
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcccce--ecccccCCCc--chhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccc
Q 004314 412 EPVVFIDKPVTLSERAAYYTIAECVV--VTAVRDGMNL--TPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS 487 (761)
Q Consensus 412 ~pV~~~~~~v~~~el~aly~~ADv~v--vtS~~EGmnL--v~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 487 (761)
+.|.+.+--++-++.+.++..||..| -||. -|.-| -+...--|+. |+++-.|.-..|.
T Consensus 318 ~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGcgl-----------------PvcA~~fkcl~EL 379 (444)
T KOG2941|consen 318 QHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGCGL-----------------PVCAVNFKCLDEL 379 (444)
T ss_pred cceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcCCC-----------------ceeeecchhHHHH
Confidence 78888887788999999999999654 4554 34443 3445555654 6776677655555
Q ss_pred cc---CcEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHhhHHhhCCHHHHHHHHHH
Q 004314 488 LS---GAIRVNPWNIEATAEAMHEAIQM---NEAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (761)
Q Consensus 488 l~---~al~VnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~ 542 (761)
+. +|++++ |.+++|+.|..+++. +..+.. +.++-+++..-.+|..+--+
T Consensus 380 Vkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~----~lkkn~~e~~e~RW~~~W~~ 434 (444)
T KOG2941|consen 380 VKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELN----QLKKNLREEQELRWDESWER 434 (444)
T ss_pred HhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHH----HHHHhhHHHHhhhHHHHHHH
Confidence 52 599998 899999999999872 222222 33444445555777765443
No 161
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=95.13 E-value=0.068 Score=51.39 Aligned_cols=98 Identities=18% Similarity=0.277 Sum_probs=49.8
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcc-----hHHHHHH-hhhcCEEeeeCH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPV-----REEILKA-LLNADLIGFHTF 265 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~-----r~~il~~-ll~~DligF~t~ 265 (761)
++++..++ |+|++|.++...+...... ++++.+++|.+++.........+ ...+.+. ...+|.+..-+.
T Consensus 74 ~~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~ 148 (177)
T PF13439_consen 74 RLIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSE 148 (177)
T ss_dssp HHHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSH
T ss_pred HHHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECH
Confidence 34444465 8999999887765433322 88999999998742111111111 1111222 246788877777
Q ss_pred HHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccch
Q 004314 266 DYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIE 314 (761)
Q Consensus 266 ~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~ 314 (761)
.-++.+.+ .|. ...++.++|+|||++.|+
T Consensus 149 ~~~~~l~~-----~~~---------------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 149 STKDELIK-----FGI---------------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHHHH-----hCC---------------cccCCEEEECCccHHHcC
Confidence 66555543 232 123788999999999884
No 162
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.31 E-value=0.012 Score=52.99 Aligned_cols=49 Identities=16% Similarity=0.368 Sum_probs=36.1
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 594 I~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
|++|+||||.. ...|-+...+.|++|.+ .+..++++|-.+...-+++..
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L~~-~g~~~~~lTNns~~s~~~~~~ 49 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDALRE-RGKPVVFLTNNSSRSREEYAK 49 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHHHH-TTSEEEEEES-SSS-HHHHHH
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHH
Confidence 68999999997 34466789999999996 588999998777555444443
No 163
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.20 E-value=0.048 Score=52.47 Aligned_cols=47 Identities=26% Similarity=0.299 Sum_probs=37.1
Q ss_pred eeEEecCCCcCCCCCCCC-------CCCCHHHHHHHHHHHhcCCCeEEEEcCCCh
Q 004314 592 RAILFDYDGTVMPQTSIN-------KAPSQAVISIINTLCNDARNTVFVVSGRGR 639 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~~~-------~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~ 639 (761)
+++++|.||||+...+.. ..+.+.+.++|+.|.+ .+..++|+|+.+.
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~~ 54 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRA-AGYTVVVVTNQSG 54 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHH-CCCEEEEEeCCCc
Confidence 478999999999865411 2356789999999996 5899999998763
No 164
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=94.03 E-value=0.81 Score=51.64 Aligned_cols=138 Identities=16% Similarity=0.135 Sum_probs=80.2
Q ss_pred eEEEeecC-ccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhc---------cc
Q 004314 337 TVLLGVDD-MDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINE---------TF 406 (761)
Q Consensus 337 ~vil~VdR-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~---------~~ 406 (761)
.++++-.| -+..++++..++|++++.++ |+++ ++....+. .+++.+++.+.+. .++. .|
T Consensus 208 lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~----~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 208 IALLPGSRPPEAYRNLKLLLRALEALPDS-QPFV----FLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLF 276 (396)
T ss_pred EEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeE----EEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhh
Confidence 34556677 45567888999999998655 5443 54443222 2333443333211 1100 00
Q ss_pred CCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCC--
Q 004314 407 GRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC-- 484 (761)
Q Consensus 407 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~-- 484 (761)
- ..++.++. ...+..++|++||++|..| |-+..|+++++. |.|+--+.+.
T Consensus 277 ~---~~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~-----------------P~Ilip~~~~q~ 328 (396)
T TIGR03492 277 Q---KGTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGK-----------------PVIQLPGKGPQF 328 (396)
T ss_pred c---cCceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCC-----------------CEEEEeCCCCHH
Confidence 0 01133222 2467899999999999885 356699999976 4444332121
Q ss_pred -c---cc---c-cCcEEECCCCHHHHHHHHHHHHcCC
Q 004314 485 -S---PS---L-SGAIRVNPWNIEATAEAMHEAIQMN 513 (761)
Q Consensus 485 -~---~~---l-~~al~VnP~d~~~~A~ai~~aL~m~ 513 (761)
+ +. + .+++.+...+++.+++++.++|+++
T Consensus 329 na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 329 TYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred HHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCH
Confidence 0 11 1 3456666678899999999999854
No 165
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.00 E-value=0.14 Score=50.63 Aligned_cols=56 Identities=16% Similarity=0.171 Sum_probs=43.8
Q ss_pred ccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCC-hhhHHhhcc
Q 004314 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRG-RDCLGKWFS 647 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~-~~~L~~~f~ 647 (761)
...+++++|+||||+... ...+.+.+.+.|++|.+ .+..++|+|+.+ ...+..++.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~--~~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~~~ 79 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPD--HNEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAVEK 79 (170)
T ss_pred CCCCEEEEecCCccccCC--CCCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHHHH
Confidence 467999999999999753 23566789999999986 578999999998 455554443
No 166
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=93.95 E-value=0.13 Score=53.74 Aligned_cols=62 Identities=19% Similarity=0.303 Sum_probs=46.3
Q ss_pred cCCHHHHHHHHHhccceeEEecCCCcCCCCCCC-------------------------------CCCCCHHHHHHHHHHH
Q 004314 576 KLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSI-------------------------------NKAPSQAVISIINTLC 624 (761)
Q Consensus 576 ~l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~~-------------------------------~~~p~~~~~~~L~~L~ 624 (761)
=.++++|.+.-...+...|.+|+|||++..++. ...|-+.++++|+.|.
T Consensus 48 ~~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~ 127 (237)
T PRK11009 48 WVSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHV 127 (237)
T ss_pred EEEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHH
Confidence 367888888765555559999999999952210 1224456899999998
Q ss_pred hcCCCeEEEEcCCC
Q 004314 625 NDARNTVFVVSGRG 638 (761)
Q Consensus 625 ~d~~n~V~IvSGR~ 638 (761)
+ .+..++++|||.
T Consensus 128 ~-~G~~I~iVTnR~ 140 (237)
T PRK11009 128 K-RGDSIYFITGRT 140 (237)
T ss_pred H-CCCeEEEEeCCC
Confidence 5 599999999996
No 167
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=93.93 E-value=0.06 Score=52.73 Aligned_cols=43 Identities=23% Similarity=0.342 Sum_probs=31.1
Q ss_pred eeEEecCCCcCCCCCCCCC---------CCCHHHHHHHHHHHhcCCCeEEEEc
Q 004314 592 RAILFDYDGTVMPQTSINK---------APSQAVISIINTLCNDARNTVFVVS 635 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~~~~---------~p~~~~~~~L~~L~~d~~n~V~IvS 635 (761)
|+.++|+||||....+... ...+.+.+.|++|.+ .+..++|+|
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~-~Gy~IvIvT 52 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHK-KGYKIVIVT 52 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHH-TTEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHh-cCCeEEEEe
Confidence 5789999999987543222 123579999999986 589999998
No 168
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=93.88 E-value=13 Score=41.23 Aligned_cols=256 Identities=16% Similarity=0.078 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhh--hcCEEee
Q 004314 185 ANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL--NADLIGF 262 (761)
Q Consensus 185 vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll--~~DligF 262 (761)
+=..|++.+.+ .+| |+|.||.=-.-.+..-+-....++||++. |-=-=+.|. ..|.-+|+.|.+. -||+---
T Consensus 55 ~~~~~~~~~~~-~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~--~~g~~de~~R~~i~~la~lhf~ 128 (346)
T PF02350_consen 55 AIIELADVLER-EKP--DAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDR--TEGMPDEINRHAIDKLAHLHFA 128 (346)
T ss_dssp HHHHHHHHHHH-HT---SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-T--TSSTTHHHHHHHHHHH-SEEEE
T ss_pred HHHHHHHHHHh-cCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCcccc--CCCCchhhhhhhhhhhhhhhcc
Confidence 33445444444 477 89999976666555555555678887753 211000111 1234455555542 3677767
Q ss_pred eCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEee
Q 004314 263 HTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGV 342 (761)
Q Consensus 263 ~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~V 342 (761)
-|..+.++.++ .|.+. ++ +.. +-.+++|.-........+.. ....+.....++.+++..
T Consensus 129 ~t~~~~~~L~~-----~G~~~--~r----I~~--------vG~~~~D~l~~~~~~~~~~~--~~~~i~~~~~~~~iLvt~ 187 (346)
T PF02350_consen 129 PTEEARERLLQ-----EGEPP--ER----IFV--------VGNPGIDALLQNKEEIEEKY--KNSGILQDAPKPYILVTL 187 (346)
T ss_dssp SSHHHHHHHHH-----TT--G--GG----EEE-----------HHHHHHHHHHHTTCC-H--HHHHHHHCTTSEEEEEE-
T ss_pred CCHHHHHHHHh-----cCCCC--Ce----EEE--------EChHHHHHHHHhHHHHhhhh--hhHHHHhccCCCEEEEEe
Confidence 77887777664 34321 11 111 22456665322211111000 011222223445555555
Q ss_pred cCcccc---CChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcC
Q 004314 343 DDMDIF---KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDK 419 (761)
Q Consensus 343 dRld~~---KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~ 419 (761)
=|.... ......+.+++.|.+. +++. +|....++ ....+.+.+...++ ..|.++ .
T Consensus 188 H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~-------p~~~~~i~~~l~~~---------~~v~~~-~ 245 (346)
T PF02350_consen 188 HPVTNEDNPERLEQILEALKALAER-QNVP----VIFPLHNN-------PRGSDIIIEKLKKY---------DNVRLI-E 245 (346)
T ss_dssp S-CCCCTHH--HHHHHHHHHHHHHH-TTEE----EEEE--S--------HHHHHHHHHHHTT----------TTEEEE--
T ss_pred CcchhcCChHHHHHHHHHHHHHHhc-CCCc----EEEEecCC-------chHHHHHHHHhccc---------CCEEEE-C
Confidence 554433 3467778888888776 5543 44443221 12223333322221 146655 5
Q ss_pred CCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc---cCcEEECC
Q 004314 420 PVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL---SGAIRVNP 496 (761)
Q Consensus 420 ~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~al~VnP 496 (761)
+++..++..+++.|+++|-.|- | +..||..++. |+|.=...|-.+.. ...++|.
T Consensus 246 ~l~~~~~l~ll~~a~~vvgdSs--G---I~eEa~~lg~-----------------P~v~iR~~geRqe~r~~~~nvlv~- 302 (346)
T PF02350_consen 246 PLGYEEYLSLLKNADLVVGDSS--G---IQEEAPSLGK-----------------PVVNIRDSGERQEGRERGSNVLVG- 302 (346)
T ss_dssp ---HHHHHHHHHHESEEEESSH--H---HHHHGGGGT-------------------EEECSSS-S-HHHHHTTSEEEET-
T ss_pred CCCHHHHHHHHhcceEEEEcCc--c---HHHHHHHhCC-----------------eEEEecCCCCCHHHHhhcceEEeC-
Confidence 8999999999999999987763 2 3449999876 55554555655554 2456666
Q ss_pred CCHHHHHHHHHHHHcC
Q 004314 497 WNIEATAEAMHEAIQM 512 (761)
Q Consensus 497 ~d~~~~A~ai~~aL~m 512 (761)
.|.+++.+||.+++..
T Consensus 303 ~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 303 TDPEAIIQAIEKALSD 318 (346)
T ss_dssp SSHHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHhC
Confidence 7999999999999985
No 169
>PTZ00445 p36-lilke protein; Provisional
Probab=93.78 E-value=0.13 Score=52.24 Aligned_cols=61 Identities=21% Similarity=0.212 Sum_probs=46.9
Q ss_pred CHHHHHHHHHhccceeEEecCCCcCCCCCC---CC---------CCCCHHHHHHHHHHHhcCCCeEEEEcCCCh
Q 004314 578 SIDAIVSAYLRSKSRAILFDYDGTVMPQTS---IN---------KAPSQAVISIINTLCNDARNTVFVVSGRGR 639 (761)
Q Consensus 578 ~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~---~~---------~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~ 639 (761)
..+.++..+++...|+|++|+|-||++..+ .+ ...+++++..+++|.+ .+..|+|||=-+.
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~-~~I~v~VVTfSd~ 102 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKN-SNIKISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHH-CCCeEEEEEccch
Confidence 345677778889999999999999998221 11 2368999999999985 6899999985444
No 170
>PRK06769 hypothetical protein; Validated
Probab=93.73 E-value=0.062 Score=53.28 Aligned_cols=50 Identities=18% Similarity=0.178 Sum_probs=39.3
Q ss_pred ccceeEEecCCCcCCCCCC----CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCCh
Q 004314 589 SKSRAILFDYDGTVMPQTS----INKAPSQAVISIINTLCNDARNTVFVVSGRGR 639 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~----~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~ 639 (761)
+..|+|++|-||||.+... ..-.+-+.+.++|++|.+ .+..++|+|+.+.
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~Tn~~~ 55 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKA-NHIKIFSFTNQPG 55 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHH-CCCEEEEEECCch
Confidence 4579999999999977542 123356899999999986 5899999998763
No 171
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=93.67 E-value=0.13 Score=50.80 Aligned_cols=63 Identities=22% Similarity=0.385 Sum_probs=45.8
Q ss_pred cccccCCHHHHHHHHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCC-CeEEEEcCCC
Q 004314 572 PNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDAR-NTVFVVSGRG 638 (761)
Q Consensus 572 ~~f~~l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~-n~V~IvSGR~ 638 (761)
++|..++.+.- -.++...|.|++|.|.||++. ....+++++.+.++++.+.-+ ..|+|+|-..
T Consensus 24 ~si~~I~~~~~--~Lk~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsa 87 (168)
T PF09419_consen 24 PSIRDIDFEAN--HLKKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSA 87 (168)
T ss_pred CChhhCCcchh--hhhhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCC
Confidence 34555655430 135678999999999999974 355678899999999997533 2699999863
No 172
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=93.64 E-value=0.14 Score=55.27 Aligned_cols=58 Identities=26% Similarity=0.401 Sum_probs=46.3
Q ss_pred cceeEEecCCCcCCCCCCC---------CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 590 KSRAILFDYDGTVMPQTSI---------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~---------~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+++++|+||||...... ...+.+.+.+.|++|.+ .+..++|+|||+....+..+..
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~ 223 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEW 223 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHH
Confidence 4579999999999974321 34678899999999986 5899999999999877665543
No 173
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=93.47 E-value=0.064 Score=53.23 Aligned_cols=47 Identities=23% Similarity=0.293 Sum_probs=36.6
Q ss_pred eeEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCCh
Q 004314 592 RAILFDYDGTVMPQTS-----INKAPSQAVISIINTLCNDARNTVFVVSGRGR 639 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~ 639 (761)
|++|+|.||||+...+ .+..+-+.+.++|++|.+ .+..++|+|..+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKK-MGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 7899999999995321 123345789999999986 5899999998763
No 174
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=93.34 E-value=0.077 Score=51.04 Aligned_cols=60 Identities=17% Similarity=0.191 Sum_probs=40.3
Q ss_pred hccceeEEecCCCcCCCCCC--------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 588 RSKSRAILFDYDGTVMPQTS--------INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 588 ~s~~rlI~lDyDGTL~~~~~--------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
..+.||+++|.||||++-.- ..++....= .-++.|.+ .+.+|+|+|||.-..+++..+.+
T Consensus 5 a~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG-~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~L 72 (170)
T COG1778 5 AKNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDG-HGIKLLLK-SGIKVAIITGRDSPIVEKRAKDL 72 (170)
T ss_pred hhhceEEEEeccceeecCeEEEcCCCceeeeeeccCc-HHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHc
Confidence 34689999999999997431 111111100 12334443 58999999999999999998753
No 175
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=93.24 E-value=0.95 Score=51.78 Aligned_cols=103 Identities=20% Similarity=0.246 Sum_probs=61.8
Q ss_pred CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~p 413 (761)
.+..++.+..++ .|=-+..+..+.++|++-|+-+ |++...|. .+ ++.+.+.+.+ +|- +-..
T Consensus 283 ~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~--~~------~~~l~~~~~~----~Gv-~~~R 343 (468)
T PF13844_consen 283 EDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPA--SG------EARLRRRFAA----HGV-DPDR 343 (468)
T ss_dssp SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETST--TH------HHHHHHHHHH----TTS--GGG
T ss_pred CCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCH--HH------HHHHHHHHHH----cCC-Chhh
Confidence 355555556666 5667889999999999999865 76665443 11 1233333333 232 2346
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeec
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 457 (761)
|+|.. ..+.++..+.|+.+|||+-|..+-| +.+.+||+.+|.
T Consensus 344 i~f~~-~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwmGV 385 (468)
T PF13844_consen 344 IIFSP-VAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWMGV 385 (468)
T ss_dssp EEEEE----HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT-
T ss_pred EEEcC-CCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHcCC
Confidence 88654 6688999999999999999987766 468899999865
No 176
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=92.52 E-value=0.099 Score=52.03 Aligned_cols=47 Identities=26% Similarity=0.322 Sum_probs=36.6
Q ss_pred ceeEEecCCCcCCCCCC------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCC
Q 004314 591 SRAILFDYDGTVMPQTS------INKAPSQAVISIINTLCNDARNTVFVVSGRG 638 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~ 638 (761)
.|++++|.||||.-... ....+-+.+.++|++|.+ .+..++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQ-AGYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHH-CCCEEEEEeCCc
Confidence 58999999999975431 112356788999999986 588999999876
No 177
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=92.40 E-value=0.16 Score=58.96 Aligned_cols=50 Identities=16% Similarity=0.242 Sum_probs=38.5
Q ss_pred ccceeEEecCCCcCCCCCCCC---------CCCCHHHHHHHHHHHhcCCCeEEEEcCCCh
Q 004314 589 SKSRAILFDYDGTVMPQTSIN---------KAPSQAVISIINTLCNDARNTVFVVSGRGR 639 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~~~---------~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~ 639 (761)
.+.|+++||+||||....+.. ..+.+.+.+.|++|.+ .+..++|+|..+.
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~-~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEA-DGFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHH-CCCEEEEEECCcc
Confidence 457999999999999754321 1245789999999986 5899999998655
No 178
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=92.09 E-value=9.2 Score=42.62 Aligned_cols=73 Identities=11% Similarity=-0.021 Sum_probs=49.5
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-C-
Q 004314 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G- 490 (761)
Q Consensus 413 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~- 490 (761)
.|. +.++++..++.++++.|+++|-.|- |.+ .||.+.|. |+|. ...=.+.+. |
T Consensus 263 ~v~-l~~~l~~~~~l~Ll~~a~~vitdSS----ggi-~EA~~lg~-----------------Pvv~--l~~R~e~~~~g~ 317 (365)
T TIGR03568 263 NFR-LFKSLGQERYLSLLKNADAVIGNSS----SGI-IEAPSFGV-----------------PTIN--IGTRQKGRLRAD 317 (365)
T ss_pred CEE-EECCCChHHHHHHHHhCCEEEEcCh----hHH-HhhhhcCC-----------------CEEe--ecCCchhhhhcC
Confidence 355 4568999999999999999985442 122 79999876 4442 222222232 3
Q ss_pred -cEEECCCCHHHHHHHHHHHHc
Q 004314 491 -AIRVNPWNIEATAEAMHEAIQ 511 (761)
Q Consensus 491 -al~VnP~d~~~~A~ai~~aL~ 511 (761)
.+.| +.|.+++.+++.+++.
T Consensus 318 nvl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 318 SVIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred eEEEe-CCCHHHHHHHHHHHhC
Confidence 3447 6689999999999554
No 179
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=91.95 E-value=0.25 Score=51.17 Aligned_cols=57 Identities=16% Similarity=0.198 Sum_probs=44.1
Q ss_pred cceeEEecCCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhh---HH
Q 004314 590 KSRAILFDYDGTVMPQTS-----------------------INKAPSQAVISIINTLCNDARNTVFVVSGRGRDC---LG 643 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~-----------------------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~---L~ 643 (761)
++-+++||+|-|++...+ ..+.+-+.++++++.|.+ .|..|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHH
Confidence 567899999999986331 134567899999999986 699999999999765 44
Q ss_pred hhcc
Q 004314 644 KWFS 647 (761)
Q Consensus 644 ~~f~ 647 (761)
+++.
T Consensus 155 ~nL~ 158 (229)
T TIGR01675 155 DNLI 158 (229)
T ss_pred HHHH
Confidence 5553
No 180
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=91.83 E-value=0.23 Score=51.90 Aligned_cols=47 Identities=17% Similarity=0.292 Sum_probs=38.2
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhh
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDC 641 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~ 641 (761)
+.+++++|+||||... ..+.+.+.++|++|.+ .+..++|+|..++..
T Consensus 7 ~~~~~~~D~dG~l~~~----~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~ 53 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDG----NHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNI 53 (242)
T ss_pred cCCEEEEecccccccC----CccCccHHHHHHHHHH-CCCEEEEEeCCCCCh
Confidence 3679999999999873 3467899999999996 588999988776653
No 181
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=91.80 E-value=0.13 Score=54.56 Aligned_cols=54 Identities=24% Similarity=0.355 Sum_probs=40.8
Q ss_pred ccceeEEecCCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHH
Q 004314 589 SKSRAILFDYDGTVMPQTS-----------------------INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLG 643 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~-----------------------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~ 643 (761)
.++.+|++|+|+|++...+ ....+-+.+.+.|+.|.+ .+..++++|+|+.....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~ 149 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKA 149 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHH
Confidence 4567999999999985331 023455788999999986 58999999999855433
No 182
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=91.66 E-value=0.27 Score=50.22 Aligned_cols=36 Identities=17% Similarity=0.051 Sum_probs=28.7
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.+.+.|+.|.+ .+..++|+||.....++.+...
T Consensus 86 ~~~g~~~~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~ 121 (219)
T TIGR00338 86 LTEGAEELVKTLKE-KGYKVAVISGGFDLFAEHVKDK 121 (219)
T ss_pred cCCCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHH
Confidence 45678889999986 5889999999988877776654
No 183
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=91.62 E-value=0.31 Score=45.81 Aligned_cols=68 Identities=16% Similarity=0.151 Sum_probs=40.5
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHH-----HHhhhcCEEeeeCHHHHHHHHH
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEIL-----KALLNADLIGFHTFDYARHFLS 273 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il-----~~ll~~DligF~t~~~~~~Fl~ 273 (761)
-|+|++|+++..+++.+++++ .++|+.+.+|..+.... .++...++ ..+-.||.|-..+...++.+.+
T Consensus 74 ~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 74 PDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp -SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred CeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 489999998877777777744 48999999997543221 12222222 3345789999999888777654
No 184
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=91.57 E-value=0.2 Score=53.00 Aligned_cols=75 Identities=19% Similarity=0.209 Sum_probs=48.9
Q ss_pred cceeEEecCCCcCCCCCC-----------------C-------CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhh
Q 004314 590 KSRAILFDYDGTVMPQTS-----------------I-------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKW 645 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~-----------------~-------~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~ 645 (761)
.+-++++|+|+|++...+ . .+.+-+.+++.++.|.+ .|..|+++|||+-..-...
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS-LGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH-CCCEEEEEeCCchhHHHHH
Confidence 357999999999994210 1 34556889999999986 6999999999986544334
Q ss_pred ccCCCCceEEccCCeEEeec
Q 004314 646 FSPCKKLGIAAEHGYFMRWS 665 (761)
Q Consensus 646 f~~~~~l~liaehGa~ir~~ 665 (761)
..++.+.|+-......+|.+
T Consensus 179 ~~NL~kaGy~~~~~LiLR~~ 198 (275)
T TIGR01680 179 EANLKKAGYHTWEKLILKDP 198 (275)
T ss_pred HHHHHHcCCCCcceeeecCC
Confidence 43333333322233444543
No 185
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=91.54 E-value=0.24 Score=51.69 Aligned_cols=50 Identities=22% Similarity=0.344 Sum_probs=38.7
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEc---CCChhhHHhhccC
Q 004314 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVS---GRGRDCLGKWFSP 648 (761)
Q Consensus 594 I~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvS---GR~~~~L~~~f~~ 648 (761)
++||+||||.... .+-+.+.+.|+.|.+ .+..++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~~~----~~~~~a~e~i~~l~~-~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLGH----KPIPGAAEALNRLRA-KGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcCC----ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 5799999999832 234588999999986 578888887 8999877766654
No 186
>PLN02954 phosphoserine phosphatase
Probab=91.53 E-value=0.25 Score=50.59 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=28.5
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
.+.+.++|+.|.+ .+..++|+||.....++..+..
T Consensus 86 ~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~~l~~ 120 (224)
T PLN02954 86 SPGIPELVKKLRA-RGTDVYLVSGGFRQMIAPVAAI 120 (224)
T ss_pred CccHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHH
Confidence 4677788888876 5889999999999988877664
No 187
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=91.44 E-value=0.3 Score=50.20 Aligned_cols=36 Identities=11% Similarity=0.050 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.+.++|+.|.+ .+..++|+||.....++..+..
T Consensus 75 l~pG~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~ 110 (219)
T PRK09552 75 IREGFHEFVQFVKE-NNIPFYVVSGGMDFFVYPLLQG 110 (219)
T ss_pred cCcCHHHHHHHHHH-cCCeEEEECCCcHHHHHHHHHH
Confidence 44666788888875 6899999999999888887765
No 188
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=91.42 E-value=0.17 Score=49.57 Aligned_cols=46 Identities=20% Similarity=0.312 Sum_probs=35.5
Q ss_pred ceeEEecCCCcCCCCCCC--------CCCCCHHHHHHHHHHHhcCCCeEEEEcCC
Q 004314 591 SRAILFDYDGTVMPQTSI--------NKAPSQAVISIINTLCNDARNTVFVVSGR 637 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~--------~~~p~~~~~~~L~~L~~d~~n~V~IvSGR 637 (761)
+++++||.||||....+. ...+-+.+.++|++|.+ ++..++|+|..
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~-~g~~l~IvSN~ 54 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKK-AGYKFVMVTNQ 54 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHH-CCCeEEEEeCC
Confidence 478999999999874331 12345789999999996 58899999975
No 189
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=90.90 E-value=0.36 Score=51.62 Aligned_cols=36 Identities=11% Similarity=0.159 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
.+.+.++|+.|.+ .+..++|+|+.....+...+...
T Consensus 144 ~pg~~e~L~~L~~-~gi~laIvSn~~~~~~~~~L~~~ 179 (273)
T PRK13225 144 FPGVADLLAQLRS-RSLCLGILSSNSRQNIEAFLQRQ 179 (273)
T ss_pred CCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHc
Confidence 4567788889885 58899999999999888887643
No 190
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=90.88 E-value=0.28 Score=54.33 Aligned_cols=47 Identities=21% Similarity=0.306 Sum_probs=38.2
Q ss_pred cceeEEecCCCcCCCCCC--------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCC
Q 004314 590 KSRAILFDYDGTVMPQTS--------INKAPSQAVISIINTLCNDARNTVFVVSGR 637 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~--------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR 637 (761)
++++++||.||||....+ ....+.+.+.+.|+.|.+ .+..++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 468999999999998542 234567899999999975 68899999985
No 191
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=90.88 E-value=0.47 Score=51.89 Aligned_cols=58 Identities=17% Similarity=0.128 Sum_probs=46.9
Q ss_pred cceeEEecCCCcCCCCC--CC------CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 590 KSRAILFDYDGTVMPQT--SI------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~--~~------~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
.+|+|++|.|+||..-. .. -..+.+.+.+.|++|.+ .|..++|+|..+...+.+.|..
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHh
Confidence 36899999999998743 11 11345789999999985 6899999999999999888876
No 192
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=90.63 E-value=0.52 Score=47.13 Aligned_cols=34 Identities=15% Similarity=-0.061 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.++|+.|.+ .+..++|+||.....++.++..
T Consensus 83 ~g~~e~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~ 116 (201)
T TIGR01491 83 DYAEELVRWLKE-KGLKTAIVSGGIMCLAKKVAEK 116 (201)
T ss_pred ccHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHH
Confidence 455677888875 5889999999998888887754
No 193
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=90.13 E-value=0.28 Score=49.47 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
.+.+.++|+.|.+ . ..++|+||.....++.++..
T Consensus 70 ~pg~~e~L~~L~~-~-~~~~IvS~~~~~~~~~~l~~ 103 (205)
T PRK13582 70 LPGAVEFLDWLRE-R-FQVVILSDTFYEFAGPLMRQ 103 (205)
T ss_pred CCCHHHHHHHHHh-c-CCEEEEeCCcHHHHHHHHHH
Confidence 3556788888886 3 78999999999988888664
No 194
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=89.83 E-value=0.79 Score=50.20 Aligned_cols=35 Identities=11% Similarity=-0.063 Sum_probs=25.4
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+.+.+.+.|+.|.+ .+..++|+||......+....
T Consensus 182 l~pGa~elL~~Lk~-~G~~~aIvSgg~~~~~~~l~~ 216 (322)
T PRK11133 182 LMPGLTELVLKLQA-LGWKVAIASGGFTYFADYLRD 216 (322)
T ss_pred CChhHHHHHHHHHH-cCCEEEEEECCcchhHHHHHH
Confidence 45666777888875 588999999988665555444
No 195
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=89.43 E-value=5.3 Score=44.69 Aligned_cols=70 Identities=19% Similarity=0.143 Sum_probs=49.0
Q ss_pred HHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCc---ccc-c----CcE-EEC
Q 004314 425 ERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS---PSL-S----GAI-RVN 495 (761)
Q Consensus 425 el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~---~~l-~----~al-~Vn 495 (761)
+.-.+-+.+.+.|+||.+|+.|-+|.|..+.|. |-|.+..+|.. ++. . -|| +|+
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGi-----------------PSvtTNlSGFGcfMeehi~d~~ayGIYIvD 555 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGI-----------------PSVTTNLSGFGCFMEEHIEDPQAYGIYIVD 555 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEecc-----------------ccccccccchhhhHHHHhcCchhceEEEEe
Confidence 556678899999999999999999999999875 55665555533 222 1 144 442
Q ss_pred -----C-CCHHHHHHHHHHHHc
Q 004314 496 -----P-WNIEATAEAMHEAIQ 511 (761)
Q Consensus 496 -----P-~d~~~~A~ai~~aL~ 511 (761)
| .+++++++-|..-..
T Consensus 556 RRfks~deSv~qL~~~m~~F~~ 577 (692)
T KOG3742|consen 556 RRFKSPDESVQQLASFMYEFCK 577 (692)
T ss_pred cccCChhhHHHHHHHHHHHHHH
Confidence 2 346778887777665
No 196
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=89.38 E-value=32 Score=38.38 Aligned_cols=136 Identities=15% Similarity=0.166 Sum_probs=83.9
Q ss_pred CeEEEeecCcccc-CChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004314 336 KTVLLGVDDMDIF-KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (761)
Q Consensus 336 ~~vil~VdRld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV 414 (761)
+-+++..-|-... +++...+.|+.++++++|+.. +| .|.--+ +-++ +.+ +.+++. -..|
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----vi---yp~H~~-~~v~-------e~~---~~~L~~--~~~v 264 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VI---YPVHPR-PRVR-------ELV---LKRLKN--VERV 264 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EE---EeCCCC-hhhh-------HHH---HHHhCC--CCcE
Confidence 4566667776655 999999999999999998764 32 232111 2222 222 112222 1246
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-C-cE
Q 004314 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G-AI 492 (761)
Q Consensus 415 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-al 492 (761)
+++ .++...+...|...|-+.+--| |=.--||-.-+. + ++++=+.+.=.+.+. | .+
T Consensus 265 ~li-~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~---------------P-vl~lR~~TERPE~v~agt~~ 322 (383)
T COG0381 265 KLI-DPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGK---------------P-VLVLRDTTERPEGVEAGTNI 322 (383)
T ss_pred EEe-CCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCC---------------c-EEeeccCCCCccceecCceE
Confidence 665 5899999999999996655444 223445555443 1 344444444344443 3 45
Q ss_pred EECCCCHHHHHHHHHHHHcCCH
Q 004314 493 RVNPWNIEATAEAMHEAIQMNE 514 (761)
Q Consensus 493 ~VnP~d~~~~A~ai~~aL~m~~ 514 (761)
+|+. |.+.+.+++.+++++++
T Consensus 323 lvg~-~~~~i~~~~~~ll~~~~ 343 (383)
T COG0381 323 LVGT-DEENILDAATELLEDEE 343 (383)
T ss_pred EeCc-cHHHHHHHHHHHhhChH
Confidence 6665 78999999999999765
No 197
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=89.19 E-value=0.64 Score=45.49 Aligned_cols=35 Identities=14% Similarity=-0.011 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
.+.+.+.|+.|.+ .+..++|+||.....++.++..
T Consensus 75 ~~g~~~~l~~l~~-~g~~~~ivS~~~~~~i~~~~~~ 109 (177)
T TIGR01488 75 RPGARELISWLKE-RGIDTVIVSGGFDFFVEPVAEK 109 (177)
T ss_pred CcCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHH
Confidence 3566777777775 5788999999988888877654
No 198
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=89.08 E-value=0.62 Score=46.33 Aligned_cols=56 Identities=21% Similarity=0.256 Sum_probs=42.5
Q ss_pred ceeEEecCCCcCCCCC----------CC-------------CCCCCHHHHHHHHHHHhcCCCeEEEEcCC-ChhhHHhhc
Q 004314 591 SRAILFDYDGTVMPQT----------SI-------------NKAPSQAVISIINTLCNDARNTVFVVSGR-GRDCLGKWF 646 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~----------~~-------------~~~p~~~~~~~L~~L~~d~~n~V~IvSGR-~~~~L~~~f 646 (761)
.||++||.|+||.... +. ...+-+.+.++|+.|.+ .+..++|+|+. ....++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 4899999999998643 00 12345889999999986 68899999998 777666655
Q ss_pred c
Q 004314 647 S 647 (761)
Q Consensus 647 ~ 647 (761)
.
T Consensus 81 ~ 81 (174)
T TIGR01685 81 G 81 (174)
T ss_pred H
Confidence 4
No 199
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=89.03 E-value=0.63 Score=44.77 Aligned_cols=58 Identities=17% Similarity=0.178 Sum_probs=44.2
Q ss_pred cceeEEecCCCcCCCCC--C--C--CC-----------------CCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhc
Q 004314 590 KSRAILFDYDGTVMPQT--S--I--NK-----------------APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWF 646 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~--~--~--~~-----------------~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f 646 (761)
++.++++|+||||+... + . .. .+-+.+.+.|+.|.+ +..++|+|+...+.++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 35789999999999753 1 0 00 235688999999974 6899999999999988877
Q ss_pred cCC
Q 004314 647 SPC 649 (761)
Q Consensus 647 ~~~ 649 (761)
..+
T Consensus 79 ~~l 81 (148)
T smart00577 79 DLL 81 (148)
T ss_pred HHh
Confidence 653
No 200
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=88.59 E-value=1.9 Score=46.11 Aligned_cols=92 Identities=13% Similarity=0.114 Sum_probs=58.5
Q ss_pred CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004314 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (761)
Q Consensus 335 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV 414 (761)
.+++++..|-.|+.+.....++|+.++ .++++ +..|.++.. +.++ ++++.++. + ..|
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~----i~vv~G~~~---~~~~----~l~~~~~~-~--------~~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS----ITLVTGSSN---PNLD----ELKKFAKE-Y--------PNI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce----EEEEECCCC---cCHH----HHHHHHHh-C--------CCE
Confidence 367999999999987666777777653 23332 333443321 2233 33444332 1 134
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeec
Q 004314 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (761)
Q Consensus 415 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 457 (761)
.++ + ..+++..+++.||++|.. -|.+.+|+++||.
T Consensus 227 ~~~-~--~~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~ 261 (279)
T TIGR03590 227 ILF-I--DVENMAELMNEADLAIGA-----AGSTSWERCCLGL 261 (279)
T ss_pred EEE-e--CHHHHHHHHHHCCEEEEC-----CchHHHHHHHcCC
Confidence 433 2 357899999999999884 4589999999986
No 201
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=87.56 E-value=0.68 Score=47.13 Aligned_cols=34 Identities=18% Similarity=0.171 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.++|+.|.+ .+..++|+||.....+...+..
T Consensus 85 ~g~~~~l~~L~~-~g~~~~i~S~~~~~~~~~~l~~ 118 (214)
T PRK13288 85 ETVYETLKTLKK-QGYKLGIVTTKMRDTVEMGLKL 118 (214)
T ss_pred cCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHH
Confidence 456778888886 5889999999998888777653
No 202
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=86.99 E-value=1.2 Score=45.47 Aligned_cols=37 Identities=8% Similarity=0.027 Sum_probs=28.7
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
+.+.+.+.|+.|.+ .+..++|+||.....++.++..+
T Consensus 71 l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 71 IREGFREFVAFINE-HGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred ccccHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHhh
Confidence 34566678888875 58899999999998888777653
No 203
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=86.82 E-value=0.81 Score=48.66 Aligned_cols=46 Identities=20% Similarity=0.320 Sum_probs=37.0
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChh
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRD 640 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~ 640 (761)
+.+.+++|+||||.. ...+-+...+.|++|.+ .+..++++|-.+..
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L~~-~g~~~iflTNn~~~ 52 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRLKA-AGKPVIFLTNNSTR 52 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHHHH-cCCeEEEEeCCCCC
Confidence 356799999999996 44566899999999997 58888888766544
No 204
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=86.79 E-value=12 Score=41.74 Aligned_cols=98 Identities=16% Similarity=0.126 Sum_probs=60.8
Q ss_pred EcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcc----cc-c-C
Q 004314 417 IDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSP----SL-S-G 490 (761)
Q Consensus 417 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~----~l-~-~ 490 (761)
+.+.++.. .++..||++|. +-|.| +..|++++|. |+|+--..+-.+ .+ . |
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~---hgG~~-t~~Eal~~G~-----------------P~v~~p~~~dq~~~a~~l~~~g 334 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFIT---HGGMN-STMEALFNGV-----------------PMVAVPQGADQPMTARRIAELG 334 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEE---CCCch-HHHHHHHhCC-----------------CEEecCCcccHHHHHHHHHHCC
Confidence 44677764 56788998885 44666 6799999986 555543333111 12 1 3
Q ss_pred -cEEECC--CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhh-CCHHHHHHHH
Q 004314 491 -AIRVNP--WNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWARSF 540 (761)
Q Consensus 491 -al~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~Wa~~~ 540 (761)
|+.++. .+.++++++|.++|..+ +.+.+.+++.+.+.. ......++.+
T Consensus 335 ~g~~l~~~~~~~~~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~~i 386 (392)
T TIGR01426 335 LGRHLPPEEVTAEKLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAADEI 386 (392)
T ss_pred CEEEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 555653 46799999999999864 455555555555544 3445555433
No 205
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=86.55 E-value=0.55 Score=46.46 Aligned_cols=58 Identities=9% Similarity=0.036 Sum_probs=42.5
Q ss_pred ceeEEecCCCcCCCCC----CCC---CCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 591 SRAILFDYDGTVMPQT----SIN---KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~----~~~---~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
.|+++||.||||++.+ ... +.-+.+=-..++.|.+ .+..++|+|+++...++..+..+
T Consensus 7 i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~-~Gi~laIiT~k~~~~~~~~l~~l 71 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQL-CGIDVAIITSKKSGAVRHRAEEL 71 (169)
T ss_pred CeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHH-CCCEEEEEECCCcHHHHHHHHHC
Confidence 7999999999999853 111 1122333455667765 58999999999999999988764
No 206
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=86.42 E-value=1.3 Score=43.57 Aligned_cols=35 Identities=9% Similarity=0.020 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
.+.+.++|+.|.+ .+..++|+|+.....++..+..
T Consensus 74 ~~g~~~ll~~l~~-~g~~~~i~S~~~~~~~~~~l~~ 108 (188)
T TIGR01489 74 DPGFKEFIAFIKE-HGIDFIVISDGNDFFIDPVLEG 108 (188)
T ss_pred CccHHHHHHHHHH-cCCcEEEEeCCcHHHHHHHHHH
Confidence 3456667777764 4678888888887777666553
No 207
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=86.12 E-value=0.094 Score=54.55 Aligned_cols=76 Identities=21% Similarity=0.245 Sum_probs=51.6
Q ss_pred ccceeEEecCCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhh
Q 004314 589 SKSRAILFDYDGTVMPQTS-----------------------INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKW 645 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~-----------------------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~ 645 (761)
.++.+|+||+|+|++...+ ....+-+..++.++.+.+ .|..|+++|||+...-...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~-~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARS-RGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHH-TTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHH-CCCeEEEEecCCchhHHHH
Confidence 4578999999999984211 012344678899999886 6999999999998855555
Q ss_pred ccCCCCceEEccCCeEEeec
Q 004314 646 FSPCKKLGIAAEHGYFMRWS 665 (761)
Q Consensus 646 f~~~~~l~liaehGa~ir~~ 665 (761)
..++...|+-.-.+.+++..
T Consensus 149 ~~nL~~~G~~~~~~l~lr~~ 168 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRPD 168 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEEE
T ss_pred HHHHHHcCCCccchhccccc
Confidence 44443344434355566654
No 208
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=86.02 E-value=1 Score=46.22 Aligned_cols=34 Identities=9% Similarity=-0.071 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.++|+.|.+ .+..++|+||.....++..++.
T Consensus 95 ~g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~ 128 (222)
T PRK10826 95 PGVREALALCKA-QGLKIGLASASPLHMLEAVLTM 128 (222)
T ss_pred CCHHHHHHHHHH-CCCeEEEEeCCcHHHHHHHHHh
Confidence 346677777775 5889999999998887777654
No 209
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=85.30 E-value=1.4 Score=44.87 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.+.|+.|.+ .+..++|+||.....+...+..
T Consensus 90 ~G~~~~L~~L~~-~g~~~~ivT~~~~~~~~~~l~~ 123 (220)
T TIGR03351 90 PGAEEAFRSLRS-SGIKVALTTGFDRDTAERLLEK 123 (220)
T ss_pred CCHHHHHHHHHH-CCCEEEEEeCCchHHHHHHHHH
Confidence 345567788875 4889999999999988877754
No 210
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=85.24 E-value=1.4 Score=48.22 Aligned_cols=48 Identities=17% Similarity=0.313 Sum_probs=33.3
Q ss_pred eEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhc---CCCeEEEE---cCCChhhHHh
Q 004314 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCND---ARNTVFVV---SGRGRDCLGK 644 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d---~~n~V~Iv---SGR~~~~L~~ 644 (761)
.++||+||||.. ...+-+...++|+.|... -+..++++ ||++.....+
T Consensus 2 ~~ifD~DGvL~~----g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~ 55 (321)
T TIGR01456 2 GFAFDIDGVLFR----GKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAE 55 (321)
T ss_pred EEEEeCcCceEC----CccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHH
Confidence 578999999997 334578899999999863 04555444 5666665433
No 211
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=84.59 E-value=12 Score=40.98 Aligned_cols=132 Identities=14% Similarity=0.144 Sum_probs=82.7
Q ss_pred cCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCC
Q 004314 343 DDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVT 422 (761)
Q Consensus 343 dRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~ 422 (761)
-.-|++-+....|+++.+.+. .+ +..+ . |- +.|...+++.++|.+.+.++ ||. ..+..++..++
T Consensus 192 NSgd~sNnHieaL~~L~~~~~--~~----~kIi--v-PL-sYg~~n~~Yi~~V~~~~~~l---F~~---~~~~iL~e~mp 255 (360)
T PF07429_consen 192 NSGDPSNNHIEALEALKQQFG--DD----VKII--V-PL-SYGANNQAYIQQVIQAGKEL---FGA---ENFQILTEFMP 255 (360)
T ss_pred CCCCCCccHHHHHHHHHHhcC--CC----eEEE--E-EC-CCCCchHHHHHHHHHHHHHh---cCc---cceeEhhhhCC
Confidence 446778777766666554321 12 2222 2 21 12333567777877777665 443 24666788999
Q ss_pred HHHHHHHHHhcccceecccc-cCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-CcEEE----CC
Q 004314 423 LSERAAYYTIAECVVVTAVR-DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRV----NP 496 (761)
Q Consensus 423 ~~el~aly~~ADv~vvtS~~-EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~V----nP 496 (761)
.+|..++++.+|+.++...| .|||-..+ .+.+| .++++|+-.-....+. .++.| +.
T Consensus 256 f~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~G-----------------~~v~L~~~np~~~~l~~~~ipVlf~~d~ 317 (360)
T PF07429_consen 256 FDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQLG-----------------KKVFLSRDNPFWQDLKEQGIPVLFYGDE 317 (360)
T ss_pred HHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHcC-----------------CeEEEecCChHHHHHHhCCCeEEecccc
Confidence 99999999999999999975 99997654 23443 3888888766666663 34333 44
Q ss_pred CCHHHHHHHHHH
Q 004314 497 WNIEATAEAMHE 508 (761)
Q Consensus 497 ~d~~~~A~ai~~ 508 (761)
-|...+++|=++
T Consensus 318 L~~~~v~ea~rq 329 (360)
T PF07429_consen 318 LDEALVREAQRQ 329 (360)
T ss_pred CCHHHHHHHHHH
Confidence 445555554443
No 212
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=83.16 E-value=1.4 Score=44.93 Aligned_cols=35 Identities=14% Similarity=0.140 Sum_probs=27.1
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
-+.+.+.|+.|.+ .+..++|+||.....+..++..
T Consensus 95 ~~g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~ 129 (226)
T PRK13222 95 YPGVKETLAALKA-AGYPLAVVTNKPTPFVAPLLEA 129 (226)
T ss_pred CCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHH
Confidence 3456667777775 5889999999999888888764
No 213
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=82.94 E-value=1.7 Score=44.67 Aligned_cols=36 Identities=14% Similarity=0.110 Sum_probs=30.3
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+-+.+.++|..|.+ .+...+|+|+++...++..+..
T Consensus 90 ~~~gv~e~L~~L~~-~g~~l~i~T~k~~~~~~~~l~~ 125 (220)
T COG0546 90 LFPGVKELLAALKS-AGYKLGIVTNKPERELDILLKA 125 (220)
T ss_pred cCCCHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHH
Confidence 34567788999996 6889999999999999988874
No 214
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=82.87 E-value=1.1 Score=43.39 Aligned_cols=56 Identities=13% Similarity=0.242 Sum_probs=38.1
Q ss_pred eeEEecCCCcCCCCCCCC----------------CCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 592 RAILFDYDGTVMPQTSIN----------------KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~~~----------------~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
|+++||+||||+...... -..-|.+.+.|+.|++ ...|+|.|..+..........+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 589999999999644211 0134678888999875 5899999999988777766543
No 215
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=82.59 E-value=1.8 Score=44.61 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=27.6
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+-+.+.++|+.|.+ .+..++++|+.++..++..+.
T Consensus 87 ~~pGv~~~l~~L~~-~~i~~avaS~s~~~~~~~~L~ 121 (221)
T COG0637 87 PIPGVVELLEQLKA-RGIPLAVASSSPRRAAERVLA 121 (221)
T ss_pred CCccHHHHHHHHHh-cCCcEEEecCChHHHHHHHHH
Confidence 34567788889886 468899999999887777775
No 216
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=82.58 E-value=1.1 Score=46.10 Aligned_cols=35 Identities=14% Similarity=0.078 Sum_probs=26.6
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
..+...++++.|.+ .+.+|+|+||-.....++...
T Consensus 78 l~~ga~elv~~lk~-~G~~v~iiSgg~~~lv~~ia~ 112 (212)
T COG0560 78 LTPGAEELVAALKA-AGAKVVIISGGFTFLVEPIAE 112 (212)
T ss_pred CCccHHHHHHHHHH-CCCEEEEEcCChHHHHHHHHH
Confidence 45667888888886 699999999988765555443
No 217
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=82.49 E-value=11 Score=42.09 Aligned_cols=73 Identities=19% Similarity=0.175 Sum_probs=48.5
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCC----cccc-
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC----SPSL- 488 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~----~~~l- 488 (761)
|. +.+.++.. +++..||++| .+-|+ -+..|++++|. |+|+--+.+- +..+
T Consensus 290 v~-~~~~~p~~---~ll~~~d~~I---~hgG~-~t~~eal~~Gv-----------------P~v~~P~~~dQ~~~a~~~~ 344 (401)
T cd03784 290 VR-VVDFVPHD---WLLPRCAAVV---HHGGA-GTTAAALRAGV-----------------PQLVVPFFGDQPFWAARVA 344 (401)
T ss_pred eE-EeCCCCHH---HHhhhhheee---ecCCc-hhHHHHHHcCC-----------------CEEeeCCCCCcHHHHHHHH
Confidence 44 44567755 4577899998 45665 47799999986 5555444441 2222
Q ss_pred -cC-cEEECCC--CHHHHHHHHHHHHc
Q 004314 489 -SG-AIRVNPW--NIEATAEAMHEAIQ 511 (761)
Q Consensus 489 -~~-al~VnP~--d~~~~A~ai~~aL~ 511 (761)
.| |+.+++. +.+++++++.++|+
T Consensus 345 ~~G~g~~l~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 345 ELGAGPALDPRELTAERLAAALRRLLD 371 (401)
T ss_pred HCCCCCCCCcccCCHHHHHHHHHHHhC
Confidence 13 5555554 68999999999998
No 218
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=82.26 E-value=4.6 Score=45.80 Aligned_cols=80 Identities=16% Similarity=0.178 Sum_probs=59.4
Q ss_pred CHHHHHHHHHhccceeEEecCCCcCCCCC----C------CCC---CCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHh
Q 004314 578 SIDAIVSAYLRSKSRAILFDYDGTVMPQT----S------INK---APSQAVISIINTLCNDARNTVFVVSGRGRDCLGK 644 (761)
Q Consensus 578 ~~~~i~~~y~~s~~rlI~lDyDGTL~~~~----~------~~~---~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~ 644 (761)
.+..++.|-.....|.++||+|+||..-. . .+. .+-.++.+.+..|.+ +|...+|+|-......++
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~k-qGVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKK-QGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHh-ccEEEEEecCCchhhHHH
Confidence 45667777777788999999999998622 0 111 233566777888885 688999999999999999
Q ss_pred hccCCCCceEEccC
Q 004314 645 WFSPCKKLGIAAEH 658 (761)
Q Consensus 645 ~f~~~~~l~liaeh 658 (761)
.|..-|.+.|=-||
T Consensus 288 vF~khp~MiLkeed 301 (574)
T COG3882 288 VFRKHPDMILKEED 301 (574)
T ss_pred HHhhCCCeEeeHhh
Confidence 99876766553333
No 219
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=81.90 E-value=0.65 Score=46.64 Aligned_cols=29 Identities=10% Similarity=0.377 Sum_probs=20.5
Q ss_pred CCCHHHHHHHHHHHhcCCCeEEEEcCCChh
Q 004314 611 APSQAVISIINTLCNDARNTVFVVSGRGRD 640 (761)
Q Consensus 611 ~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~ 640 (761)
.|-+...++|++|.+ .+..++++|+|+..
T Consensus 73 ~p~~gA~e~l~~L~~-~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRD-KGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHT-STTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHH-cCCcEEEEEecCcc
Confidence 356788999999996 56678777778754
No 220
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=81.65 E-value=49 Score=36.83 Aligned_cols=85 Identities=18% Similarity=0.143 Sum_probs=56.5
Q ss_pred HHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCC--ccc------c---cCc
Q 004314 423 LSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC--SPS------L---SGA 491 (761)
Q Consensus 423 ~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~------l---~~a 491 (761)
.+++.++|++||+++.=|= +++.-|..++|. |.|+=-+... .++ + ..|
T Consensus 243 ~~dm~~~~~~ADLvIsRaG----a~Ti~E~~a~g~-----------------P~IliP~p~~~~~~Q~~NA~~l~~~gaa 301 (357)
T COG0707 243 IDDMAALLAAADLVISRAG----ALTIAELLALGV-----------------PAILVPYPPGADGHQEYNAKFLEKAGAA 301 (357)
T ss_pred HhhHHHHHHhccEEEeCCc----ccHHHHHHHhCC-----------------CEEEeCCCCCccchHHHHHHHHHhCCCE
Confidence 3579999999999886442 578999999987 3443333333 122 2 136
Q ss_pred EEECCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhh
Q 004314 492 IRVNPWN--IEATAEAMHEAIQMNEAEKQLRHEKHYRYVST 530 (761)
Q Consensus 492 l~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 530 (761)
+.+.-.+ ++.+++.|.++++.+ |+..+|....+.+..
T Consensus 302 ~~i~~~~lt~~~l~~~i~~l~~~~--~~l~~m~~~a~~~~~ 340 (357)
T COG0707 302 LVIRQSELTPEKLAELILRLLSNP--EKLKAMAENAKKLGK 340 (357)
T ss_pred EEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHhcCC
Confidence 7776555 899999999999863 555555554444433
No 221
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=81.28 E-value=9.5 Score=36.57 Aligned_cols=73 Identities=19% Similarity=0.211 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHh
Q 004314 353 LKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI 432 (761)
Q Consensus 353 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ 432 (761)
.-+.++..+++++ ++..|.||-|-..+|..+. ..+.+++.++++..+|+- ||++.+...+..+-.+.+..
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~l----pv~l~DERltTv~A~~~L~~ 109 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFNL----PVVLWDERLSTVEAERMLIE 109 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcCC----CEEEEcCccCHHHHHHHHHH
Confidence 3445556666655 3668889999877777665 667789999999999864 89999988888777776666
Q ss_pred ccc
Q 004314 433 AEC 435 (761)
Q Consensus 433 ADv 435 (761)
+++
T Consensus 110 ~~~ 112 (141)
T COG0816 110 AGV 112 (141)
T ss_pred cCC
Confidence 443
No 222
>PLN02940 riboflavin kinase
Probab=80.00 E-value=2.2 Score=47.86 Aligned_cols=33 Identities=15% Similarity=0.091 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+.+.++|+.|.+ .+..++|+|+.+...+...+.
T Consensus 96 pGv~elL~~Lk~-~g~~l~IvTn~~~~~~~~~l~ 128 (382)
T PLN02940 96 PGANRLIKHLKS-HGVPMALASNSPRANIEAKIS 128 (382)
T ss_pred cCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHH
Confidence 345568888875 589999999999887766654
No 223
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=79.96 E-value=0.99 Score=48.56 Aligned_cols=28 Identities=32% Similarity=0.472 Sum_probs=21.6
Q ss_pred CHHHHHHHHHhccceeEEecCCCcCCCC
Q 004314 578 SIDAIVSAYLRSKSRAILFDYDGTVMPQ 605 (761)
Q Consensus 578 ~~~~i~~~y~~s~~rlI~lDyDGTL~~~ 605 (761)
+...+.++-.+++.++|+||+||||++.
T Consensus 27 ~~~~~~~~~~~~~~k~VIFDlDGTLvDS 54 (286)
T PLN02779 27 STARVASASASALPEALLFDCDGVLVET 54 (286)
T ss_pred hhhhhhhhccccCCcEEEEeCceeEEcc
Confidence 4455666656667889999999999983
No 224
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=79.45 E-value=2.9 Score=40.83 Aligned_cols=55 Identities=13% Similarity=0.308 Sum_probs=41.2
Q ss_pred eEEecCCCcCCCCC------CC--CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChh---hHHhhccC
Q 004314 593 AILFDYDGTVMPQT------SI--NKAPSQAVISIINTLCNDARNTVFVVSGRGRD---CLGKWFSP 648 (761)
Q Consensus 593 lI~lDyDGTL~~~~------~~--~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~---~L~~~f~~ 648 (761)
++++|+|||++... +. .....+.+.++.+++.+ .|..++-+|+|+.. ..+.|+..
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~-~GY~ilYlTaRp~~qa~~Tr~~L~~ 66 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIAD-NGYKILYLTARPIGQANRTRSWLAQ 66 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHH-CCeEEEEECcCcHHHHHHHHHHHHH
Confidence 47899999999752 10 11456788899999996 69999999999965 45666653
No 225
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=78.92 E-value=2.4 Score=47.43 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.++|+.|.+ .+..++|+|++....++..+..
T Consensus 219 pGa~ElL~~Lk~-~GiklaIaSn~~~~~~~~~L~~ 252 (381)
T PLN02575 219 TGSQEFVNVLMN-YKIPMALVSTRPRKTLENAIGS 252 (381)
T ss_pred cCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHH
Confidence 345567788875 5889999999999888877764
No 226
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=78.12 E-value=0.15 Score=61.33 Aligned_cols=175 Identities=19% Similarity=0.129 Sum_probs=98.7
Q ss_pred CCHHHHHHHHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHh---cCCCeEEEEcCCChhh----------HH
Q 004314 577 LSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCN---DARNTVFVVSGRGRDC----------LG 643 (761)
Q Consensus 577 l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~---d~~n~V~IvSGR~~~~----------L~ 643 (761)
....++....-..+.-|.++|+||||-++.. .+...+++.-.+++. +......++|||++.. ..
T Consensus 175 fpssEi~r~lp~r~eIl~gll~~~~i~f~t~---d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~ 251 (732)
T KOG1050|consen 175 FPSSEIYRCLPVRKEILRGLLYDDLLGFHTD---DYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQ 251 (732)
T ss_pred CChHHHHHhcccHHHHHHhhhccCccccccc---cHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchH
Confidence 3445555555555667899999999998652 233344443333332 1122366799999776 55
Q ss_pred hhccCCCCceEEccCCeEEeecCCccee-ecCcC-----cCcchHHHHHHHHHHHhc--------------CCCccEEEe
Q 004314 644 KWFSPCKKLGIAAEHGYFMRWSADEEWQ-NCGQS-----VDFGWIQIAEPVMKLYTE--------------STDGSYIEI 703 (761)
Q Consensus 644 ~~f~~~~~l~liaehGa~ir~~~~~~w~-~~~~~-----~~~~w~~~v~~im~~y~~--------------~t~Gs~iE~ 703 (761)
++.+ +.++..+++||..|+.+.++.-. ...+. -...+....+..++.|.+ +++|.-+|+
T Consensus 252 r~v~-~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~ 330 (732)
T KOG1050|consen 252 RFVK-LLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEE 330 (732)
T ss_pred Hhhc-cccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHH
Confidence 5554 46788999999999876422211 01110 112344556666666642 455555555
Q ss_pred cCceEEEEcccCCCCCchHHHHHHHHHHHHHhcCC-CcEEEeCCeEEEEEeC-CCCcC
Q 004314 704 KESALVWHHRDADPGFGSSQAKELLDHLESVLANE-PAAVKSGQFIVEVKPQ-VYIQL 759 (761)
Q Consensus 704 k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~-~v~V~~G~~~vEV~p~-gvnKG 759 (761)
-..++..||+..+..|++..+.-+. .+.... ..+...+..+.|++|. .++||
T Consensus 331 ~k~~v~~~v~rIn~~f~~~~~~pV~----~~~~~~~~~~l~a~~~Vaev~~v~s~rdG 384 (732)
T KOG1050|consen 331 LKFCVSVHVRRINEKFGSASYQPVH----SLLKDLPFLELLALYKVAEVCPVTSWRDG 384 (732)
T ss_pred HHHHhHhhhhhhhhccCCcccceEE----EeeccCCHHHHhhhHHhhhheeecccccc
Confidence 5778888888887777643321111 111111 1344556666666663 45555
No 227
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=77.99 E-value=4 Score=41.38 Aligned_cols=58 Identities=10% Similarity=0.141 Sum_probs=41.6
Q ss_pred hccceeEEecCCCcCCCCCCCC----CCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 588 RSKSRAILFDYDGTVMPQTSIN----KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 588 ~s~~rlI~lDyDGTL~~~~~~~----~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+.++++++||+||||+...+.. ...-|-+.+.|+.+.+ ...|+|=|..+..-++..+.
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~ 79 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMT 79 (195)
T ss_pred CCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHH
Confidence 3467899999999999753211 1234678899999886 78888888887766655443
No 228
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=77.39 E-value=4 Score=40.86 Aligned_cols=36 Identities=11% Similarity=-0.086 Sum_probs=28.1
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.+.+.|+.+.+ .+..|+|+||.....++.+...
T Consensus 88 ~~~~~~~~l~~l~~-~g~~v~ivS~s~~~~v~~~~~~ 123 (202)
T TIGR01490 88 LYPEARDLIRWHKA-EGHTIVLVSASLTILVKPLARI 123 (202)
T ss_pred ccHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHH
Confidence 35677788888875 5889999999998888777653
No 229
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=76.36 E-value=4.4 Score=39.48 Aligned_cols=60 Identities=13% Similarity=0.071 Sum_probs=44.6
Q ss_pred hccceeEEecCCCcCCCCCCCC--------------------------------CCCCHHHHHHHHHHHhcCCCeEEEEc
Q 004314 588 RSKSRAILFDYDGTVMPQTSIN--------------------------------KAPSQAVISIINTLCNDARNTVFVVS 635 (761)
Q Consensus 588 ~s~~rlI~lDyDGTL~~~~~~~--------------------------------~~p~~~~~~~L~~L~~d~~n~V~IvS 635 (761)
+.++..++||+|.||+...... ..+-|.+.+.|++|++ +..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~--~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK--LYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh--hcEEEEEe
Confidence 3467789999999999743210 0123678899999984 58999999
Q ss_pred CCChhhHHhhccCC
Q 004314 636 GRGRDCLGKWFSPC 649 (761)
Q Consensus 636 GR~~~~L~~~f~~~ 649 (761)
........+.+..+
T Consensus 81 ~~~~~yA~~vl~~l 94 (156)
T TIGR02250 81 MGTRAYAQAIAKLI 94 (156)
T ss_pred CCcHHHHHHHHHHh
Confidence 99999888777654
No 230
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=75.58 E-value=4.8 Score=39.38 Aligned_cols=57 Identities=9% Similarity=0.104 Sum_probs=41.6
Q ss_pred ceeEEecCCCcCCCCCCCCC---------------------CCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 591 SRAILFDYDGTVMPQTSINK---------------------APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~---------------------~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
++.+++|+|+||+....... ..-+.+.+.|++|.+ ...++|.|.-.....+..+..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~--~yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK--WYELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh--cCEEEEEcCCcHHHHHHHHHHH
Confidence 35789999999996431110 123678899999986 4889999888888777776644
No 231
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=75.47 E-value=2.8 Score=41.51 Aligned_cols=56 Identities=20% Similarity=0.192 Sum_probs=34.0
Q ss_pred ceeEEecCCCcCCCCCC--C----------C----------CCCCHHHHHHHHHHHhcCCCeEEEEcCCC-hhhHHhhcc
Q 004314 591 SRAILFDYDGTVMPQTS--I----------N----------KAPSQAVISIINTLCNDARNTVFVVSGRG-RDCLGKWFS 647 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~--~----------~----------~~p~~~~~~~L~~L~~d~~n~V~IvSGR~-~~~L~~~f~ 647 (761)
.|||+||+|+||-|.-- . . -..-+.+.++|+.|.. .+..++++|=-+ .+-.++.++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~-~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKE-RGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHH-CT--EEEEE--S-HHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHH-CCCEEEEEECCCChHHHHHHHH
Confidence 58999999999998431 0 0 0123688999999996 689999999544 444555554
No 232
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=74.67 E-value=17 Score=39.75 Aligned_cols=108 Identities=15% Similarity=0.113 Sum_probs=59.5
Q ss_pred HHHHHHc---CCCeEEEeecC--ccccCChH---HHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHH
Q 004314 327 QELKQQF---EGKTVLLGVDD--MDIFKGVD---LKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHAT 398 (761)
Q Consensus 327 ~~lr~~~---~~~~vil~VdR--ld~~KGi~---~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~l 398 (761)
.++..++ +...+.+-||- =.+.=+-. .++..+..+.+.++ .. ++ |...-|+ .+ +..+.+.++
T Consensus 135 ~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~----~~-vttSRRT-p~---~~~~~L~~~ 204 (311)
T PF06258_consen 135 AAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GS----LL-VTTSRRT-PP---EAEAALREL 204 (311)
T ss_pred HhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-Ce----EE-EEcCCCC-cH---HHHHHHHHh
Confidence 3444444 34555555653 22222222 56677788877765 22 43 3333343 32 233333433
Q ss_pred HHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeec
Q 004314 399 CKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (761)
Q Consensus 399 v~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 457 (761)
.+. ...+.++. .-+..=+.+++..||.++||. |..+++ .||+++|.
T Consensus 205 ~~~---------~~~~~~~~-~~~~nPy~~~La~ad~i~VT~--DSvSMv-sEA~~tG~ 250 (311)
T PF06258_consen 205 LKD---------NPGVYIWD-GTGENPYLGFLAAADAIVVTE--DSVSMV-SEAAATGK 250 (311)
T ss_pred hcC---------CCceEEec-CCCCCcHHHHHHhCCEEEEcC--ccHHHH-HHHHHcCC
Confidence 321 11343443 334455889999999999997 666654 69999875
No 233
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=74.65 E-value=42 Score=39.23 Aligned_cols=101 Identities=23% Similarity=0.225 Sum_probs=75.0
Q ss_pred EEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEE
Q 004314 338 VLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFI 417 (761)
Q Consensus 338 vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~ 417 (761)
|.++.. -++|=.++.+.-.-++|+.-|+-. |++-+.+ +.++..+.+++++++-+ .+...++|.
T Consensus 432 Vf~c~~--n~~K~~pev~~~wmqIL~~vP~Sv----l~L~~~~------~~~~~~~~l~~la~~~G-----v~~eRL~f~ 494 (620)
T COG3914 432 VFCCFN--NYFKITPEVFALWMQILSAVPNSV----LLLKAGG------DDAEINARLRDLAEREG-----VDSERLRFL 494 (620)
T ss_pred EEEecC--CcccCCHHHHHHHHHHHHhCCCcE----EEEecCC------CcHHHHHHHHHHHHHcC-----CChhheeec
Confidence 334444 457888899999999999999753 6655532 34567778888887754 345678866
Q ss_pred cCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeec
Q 004314 418 DKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (761)
Q Consensus 418 ~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 457 (761)
.+.+.++-.|.|..||+++-|=-+-| ..++.|++-++.
T Consensus 495 -p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm~v 532 (620)
T COG3914 495 -PPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWMGV 532 (620)
T ss_pred -CCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHhcC
Confidence 47888899999999999998877655 568889988754
No 234
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=74.63 E-value=25 Score=34.88 Aligned_cols=50 Identities=16% Similarity=0.041 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCC--CEEEEeCCccchHHHHHHHhcCCCeEEE
Q 004314 178 LWEAYVSANKIFSQRVIEVINPED--DYVWIHDYHLMVLPTFLRRRFTRLRMGF 229 (761)
Q Consensus 178 ~w~~Y~~vN~~fa~~i~~~~~~~~--DiVwvhDyhl~llp~~lr~~~~~~~ig~ 229 (761)
.|+.=..-=+..++++.+.-+.+. |+|.-| +-+.-+-+||..+|+++++-
T Consensus 42 ~~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H--~GWGe~Lflkdv~P~a~li~ 93 (171)
T PF12000_consen 42 DFEAAVLRGQAVARAARQLRAQGFVPDVIIAH--PGWGETLFLKDVFPDAPLIG 93 (171)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEc--CCcchhhhHHHhCCCCcEEE
Confidence 344444444555555555443222 999999 88888889999999999754
No 235
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=74.32 E-value=3.4 Score=40.87 Aligned_cols=16 Identities=31% Similarity=0.767 Sum_probs=13.7
Q ss_pred cceeEEecCCCcCCCC
Q 004314 590 KSRAILFDYDGTVMPQ 605 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~ 605 (761)
+.++|+||+||||++.
T Consensus 4 ~~~~viFD~DGTLiDs 19 (188)
T PRK10725 4 RYAGLIFDMDGTILDT 19 (188)
T ss_pred cceEEEEcCCCcCccC
Confidence 3578999999999983
No 236
>PRK08238 hypothetical protein; Validated
Probab=74.12 E-value=6.8 Score=45.34 Aligned_cols=36 Identities=6% Similarity=0.040 Sum_probs=30.8
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
.+++++.|+++.+ .|..++|+||.....++.....+
T Consensus 74 ~pga~e~L~~lk~-~G~~v~LaTas~~~~a~~i~~~l 109 (479)
T PRK08238 74 NEEVLDYLRAERA-AGRKLVLATASDERLAQAVAAHL 109 (479)
T ss_pred ChhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHc
Confidence 4789999999985 68999999999999888777643
No 237
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=72.90 E-value=4.7 Score=42.06 Aligned_cols=37 Identities=5% Similarity=0.093 Sum_probs=29.3
Q ss_pred CCHHHHHHHHHHHh-cCCCeEEEEcCCChhhHHhhccC
Q 004314 612 PSQAVISIINTLCN-DARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 612 p~~~~~~~L~~L~~-d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.++++++.+.+ ..+..++|+|--.--.++.|+..
T Consensus 72 ~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~ 109 (234)
T PF06888_consen 72 IDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH 109 (234)
T ss_pred CCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh
Confidence 46778888888854 34788999999888888888864
No 238
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=72.79 E-value=1.6e+02 Score=32.68 Aligned_cols=27 Identities=11% Similarity=0.022 Sum_probs=23.7
Q ss_pred HHHHHHhcccceecccccCCCcchhhheeeec
Q 004314 426 RAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (761)
Q Consensus 426 l~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 457 (761)
...+|+.||+++..| |.+.+|++.++.
T Consensus 229 ~~~~m~~aDlal~~S-----GT~TLE~al~g~ 255 (347)
T PRK14089 229 THKALLEAEFAFICS-----GTATLEAALIGT 255 (347)
T ss_pred HHHHHHhhhHHHhcC-----cHHHHHHHHhCC
Confidence 457899999999998 778889999986
No 239
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=72.21 E-value=9.8 Score=40.53 Aligned_cols=58 Identities=17% Similarity=0.214 Sum_probs=46.1
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
...+|++|+|-||.........+.+.+.+.|.+|.+ .+..+++=|--+.+....-+..
T Consensus 121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~-~g~vLvLWSyG~~eHV~~sl~~ 178 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKE-QGCVLVLWSYGNREHVRHSLKE 178 (297)
T ss_pred CCcEEEEECCCcccccCCccccCChHHHHHHHHHHH-cCCEEEEecCCCHHHHHHHHHH
Confidence 456999999999998764556688999999999997 4778888887777766666543
No 240
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=71.93 E-value=4.2 Score=40.63 Aligned_cols=45 Identities=24% Similarity=0.303 Sum_probs=34.8
Q ss_pred ceeEEecCCCcCCCCCC-C-----CCCCCHHHHHHHHHHHhcCCCeEEEEcC
Q 004314 591 SRAILFDYDGTVMPQTS-I-----NKAPSQAVISIINTLCNDARNTVFVVSG 636 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~-~-----~~~p~~~~~~~L~~L~~d~~n~V~IvSG 636 (761)
.++||+|-||||--+.+ . .-...+.++.+|.+|.+ .+..++|+|-
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~-~gy~lVvvTN 55 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQR-AGYKLVVVTN 55 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHh-CCCeEEEEEC
Confidence 68999999999976543 1 11234788999999985 6999999985
No 241
>PRK11590 hypothetical protein; Provisional
Probab=71.86 E-value=2 Score=43.78 Aligned_cols=15 Identities=40% Similarity=0.815 Sum_probs=13.5
Q ss_pred cceeEEecCCCcCCC
Q 004314 590 KSRAILFDYDGTVMP 604 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~ 604 (761)
++|+++||+||||+.
T Consensus 5 ~~k~~iFD~DGTL~~ 19 (211)
T PRK11590 5 ERRVVFFDLDGTLHQ 19 (211)
T ss_pred cceEEEEecCCCCcc
Confidence 578999999999995
No 242
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=71.69 E-value=13 Score=34.49 Aligned_cols=40 Identities=13% Similarity=0.296 Sum_probs=29.3
Q ss_pred HHHHHhCCCCCEEEEeCCcc-chHHHHHHHhcCCCeEEEEEec
Q 004314 192 RVIEVINPEDDYVWIHDYHL-MVLPTFLRRRFTRLRMGFFLHS 233 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl-~llp~~lr~~~~~~~ig~flH~ 233 (761)
++++..+| |+||+|.... .+++.++++.....|+.++.|-
T Consensus 68 k~ik~~~~--DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg 108 (139)
T PF13477_consen 68 KIIKKEKP--DVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHG 108 (139)
T ss_pred HHhccCCC--CEEEEecCChHHHHHHHHHHHcCCCCEEEEecC
Confidence 45555566 8999999875 5667777665555899999984
No 243
>PRK11587 putative phosphatase; Provisional
Probab=71.00 E-value=3.8 Score=41.82 Aligned_cols=16 Identities=38% Similarity=0.821 Sum_probs=13.7
Q ss_pred cceeEEecCCCcCCCC
Q 004314 590 KSRAILFDYDGTVMPQ 605 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~ 605 (761)
+.+.|+||+||||++.
T Consensus 2 ~~k~viFDlDGTL~Ds 17 (218)
T PRK11587 2 RCKGFLFDLDGTLVDS 17 (218)
T ss_pred CCCEEEEcCCCCcCcC
Confidence 3578999999999984
No 244
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=70.96 E-value=4.2 Score=39.92 Aligned_cols=27 Identities=22% Similarity=0.482 Sum_probs=18.6
Q ss_pred eeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHh
Q 004314 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCN 625 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~ 625 (761)
++|+||+||||++.. +....+++++.+
T Consensus 2 ~~iiFD~DGTL~ds~-------~~~~~~~~~~~~ 28 (185)
T TIGR02009 2 KAVIFDMDGVIVDTA-------PLHAQAWKHLAD 28 (185)
T ss_pred CeEEEcCCCcccCCh-------HHHHHHHHHHHH
Confidence 789999999999842 234445555554
No 245
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=70.55 E-value=2.8 Score=42.12 Aligned_cols=14 Identities=36% Similarity=0.553 Sum_probs=12.5
Q ss_pred eeEEecCCCcCCCC
Q 004314 592 RAILFDYDGTVMPQ 605 (761)
Q Consensus 592 rlI~lDyDGTL~~~ 605 (761)
|+|+||+||||++.
T Consensus 1 k~viFDlDGTL~d~ 14 (203)
T TIGR02252 1 KLITFDAVGTLLAL 14 (203)
T ss_pred CeEEEecCCceeee
Confidence 57999999999984
No 246
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=70.54 E-value=6.4 Score=39.17 Aligned_cols=57 Identities=9% Similarity=0.046 Sum_probs=33.9
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC------CCceEEccCCeEEeecCCcceeec
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC------KKLGIAAEHGYFMRWSADEEWQNC 673 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~------~~l~liaehGa~ir~~~~~~w~~~ 673 (761)
.|.+++......+ .+..|+|+||-.-..+...|..+ ..+.++. |-.++... ..|...
T Consensus 75 dp~fKef~e~ike-~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~s-n~~~ih~d--g~h~i~ 137 (220)
T COG4359 75 DPGFKEFVEWIKE-HDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVS-NNDYIHID--GQHSIK 137 (220)
T ss_pred CccHHHHHHHHHH-cCCCEEEEeCCCchHHHHHHHhhccccceeeeEEee-cCceEcCC--Cceeee
Confidence 3444455555554 57889999998888888877653 2344444 44445443 356543
No 247
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=69.01 E-value=2.6 Score=43.47 Aligned_cols=33 Identities=6% Similarity=0.139 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+.+.++|+.|.+ .+..++|+|+.+...+...+.
T Consensus 96 ~g~~e~L~~Lk~-~g~~~~i~Tn~~~~~~~~~l~ 128 (224)
T PRK14988 96 EDTVPFLEALKA-SGKRRILLTNAHPHNLAVKLE 128 (224)
T ss_pred CCHHHHHHHHHh-CCCeEEEEeCcCHHHHHHHHH
Confidence 344566666664 466777777766665555443
No 248
>PHA02597 30.2 hypothetical protein; Provisional
Probab=68.69 E-value=2.3 Score=42.56 Aligned_cols=15 Identities=33% Similarity=0.507 Sum_probs=13.1
Q ss_pred ceeEEecCCCcCCCC
Q 004314 591 SRAILFDYDGTVMPQ 605 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~ 605 (761)
.|+|+||+||||++.
T Consensus 2 ~k~viFDlDGTLiD~ 16 (197)
T PHA02597 2 KPTILTDVDGVLLSW 16 (197)
T ss_pred CcEEEEecCCceEch
Confidence 478999999999984
No 249
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=68.44 E-value=4.5 Score=43.13 Aligned_cols=15 Identities=40% Similarity=0.849 Sum_probs=13.3
Q ss_pred ceeEEecCCCcCCCC
Q 004314 591 SRAILFDYDGTVMPQ 605 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~ 605 (761)
.++|+||+||||++.
T Consensus 13 ~k~viFDlDGTL~Ds 27 (272)
T PRK13223 13 PRLVMFDLDGTLVDS 27 (272)
T ss_pred CCEEEEcCCCccccC
Confidence 569999999999984
No 250
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=67.52 E-value=2.4 Score=42.53 Aligned_cols=13 Identities=31% Similarity=0.603 Sum_probs=11.5
Q ss_pred eEEecCCCcCCCC
Q 004314 593 AILFDYDGTVMPQ 605 (761)
Q Consensus 593 lI~lDyDGTL~~~ 605 (761)
+|++|+||||++.
T Consensus 2 ~viFD~DGTLiDs 14 (197)
T TIGR01548 2 ALVLDMDGVMADV 14 (197)
T ss_pred ceEEecCceEEec
Confidence 6899999999984
No 251
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=67.01 E-value=5.6 Score=41.32 Aligned_cols=16 Identities=31% Similarity=0.526 Sum_probs=14.0
Q ss_pred cceeEEecCCCcCCCC
Q 004314 590 KSRAILFDYDGTVMPQ 605 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~ 605 (761)
+.|+|+||+||||++.
T Consensus 9 ~~k~iiFDlDGTL~D~ 24 (238)
T PRK10748 9 RISALTFDLDDTLYDN 24 (238)
T ss_pred CceeEEEcCcccccCC
Confidence 3589999999999984
No 252
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=65.84 E-value=1.6e+02 Score=35.81 Aligned_cols=134 Identities=14% Similarity=0.100 Sum_probs=72.7
Q ss_pred CCCeEEEeecCccccCChHHH-H---HHHHHHHHhCCCCcC-ceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 004314 334 EGKTVLLGVDDMDIFKGVDLK-L---LAMEHLLKQHPKWQG-RAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGR 408 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~-l---~A~~~ll~~~P~~~~-~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~ 408 (761)
++.-.++.+-|+..-|-..+. | .-+.++ ++.|+..- .+++|..|-...++ ..-.++-+.+.++++.||..-..
T Consensus 442 p~slfdv~~rR~heYKRq~LniL~ii~~y~ri-k~~p~~~~~Pv~~IFaGKAhP~d-~~gK~iIk~I~~va~~in~Dp~v 519 (713)
T PF00343_consen 442 PDSLFDVQARRFHEYKRQLLNILHIIDRYNRI-KNNPNKKIRPVQFIFAGKAHPGD-YMGKEIIKLINNVAEVINNDPEV 519 (713)
T ss_dssp TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHH-HHSTTSCCS-EEEEEE----TT--HHHHHHHHHHHHHHHHHCT-TTT
T ss_pred cchhhhhhhhhcccccccCcccccHHHHHHHH-HhcccCCCCCeEEEEeccCCCCc-HHHHHHHHHHHHHHHHHhcChhh
Confidence 355678899999999987763 3 334454 45665432 35555444322222 22234556677777777743111
Q ss_pred CCCccEEEEcCCCCHHHHHHHHHhcccceecccc--cCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcc
Q 004314 409 PGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVR--DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSP 486 (761)
Q Consensus 409 ~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~--EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 486 (761)
.+.-.|+|+. ..+-.--..++.++||-.-+|.+ |.=|.--+-+|. .|.+-+|..-|+--
T Consensus 520 ~~~lkVvFle-nYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~------------------NGaL~lstlDG~ni 580 (713)
T PF00343_consen 520 GDRLKVVFLE-NYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAM------------------NGALNLSTLDGWNI 580 (713)
T ss_dssp CCGEEEEEET-T-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHH------------------TT-EEEEESSTCHH
T ss_pred ccceeEEeec-CCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhc------------------CCCeEEecccchhH
Confidence 1222588885 56677777889999999999874 444444444443 35788888888755
Q ss_pred cc
Q 004314 487 SL 488 (761)
Q Consensus 487 ~l 488 (761)
++
T Consensus 581 Ei 582 (713)
T PF00343_consen 581 EI 582 (713)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 253
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=65.73 E-value=11 Score=38.62 Aligned_cols=21 Identities=33% Similarity=0.523 Sum_probs=17.5
Q ss_pred HhccceeEEecCCCcCCCCCC
Q 004314 587 LRSKSRAILFDYDGTVMPQTS 607 (761)
Q Consensus 587 ~~s~~rlI~lDyDGTL~~~~~ 607 (761)
+.+.+.|+++|+|-|++.+.+
T Consensus 9 ~~~~ril~~FDFD~TIid~dS 29 (256)
T KOG3120|consen 9 SSSPRILLVFDFDRTIIDQDS 29 (256)
T ss_pred ccCCcEEEEEecCceeecCCc
Confidence 345788999999999998774
No 254
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=65.27 E-value=6.2 Score=40.19 Aligned_cols=17 Identities=35% Similarity=0.694 Sum_probs=14.4
Q ss_pred cceeEEecCCCcCCCCC
Q 004314 590 KSRAILFDYDGTVMPQT 606 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~ 606 (761)
+.++|+||+||||++..
T Consensus 3 ~~~~viFD~DGTL~d~~ 19 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSE 19 (221)
T ss_pred CCCEEEECCCCCCCCCh
Confidence 46899999999999843
No 255
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=64.92 E-value=3.4 Score=43.27 Aligned_cols=30 Identities=17% Similarity=0.131 Sum_probs=20.3
Q ss_pred HHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 617 ISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 617 ~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
.++|+.|.+ .+..++|+||.+...++..+.
T Consensus 105 ~e~L~~L~~-~g~~l~IvT~~~~~~~~~~l~ 134 (253)
T TIGR01422 105 IEVIAYLRA-RGIKIGSTTGYTREMMDVVAP 134 (253)
T ss_pred HHHHHHHHH-CCCeEEEECCCcHHHHHHHHH
Confidence 456666664 467788888888777666553
No 256
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=64.87 E-value=3.7 Score=43.02 Aligned_cols=32 Identities=9% Similarity=-0.029 Sum_probs=20.4
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 616 VISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 616 ~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.++|+.|.+ .+..++|+|+.+...++..+..
T Consensus 113 v~e~L~~L~~-~g~~l~I~Tn~~~~~~~~~l~~ 144 (248)
T PLN02770 113 LYKLKKWIED-RGLKRAAVTNAPRENAELMISL 144 (248)
T ss_pred HHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHH
Confidence 4455666654 4677777777777766666543
No 257
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=64.87 E-value=4.6 Score=42.80 Aligned_cols=32 Identities=19% Similarity=0.182 Sum_probs=20.8
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 616 VISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 616 ~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.++|+.|.+ .+..++|+|+.+...+...+..
T Consensus 114 ~~e~L~~L~~-~g~~l~I~Tn~~~~~~~~~l~~ 145 (260)
T PLN03243 114 SREFVQALKK-HEIPIAVASTRPRRYLERAIEA 145 (260)
T ss_pred HHHHHHHHHH-CCCEEEEEeCcCHHHHHHHHHH
Confidence 3446666664 4677788888777766666543
No 258
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=64.04 E-value=5.9 Score=38.85 Aligned_cols=27 Identities=22% Similarity=0.453 Sum_probs=18.6
Q ss_pred eEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhc
Q 004314 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCND 626 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d 626 (761)
+|+||+||||++.. +-....++++++.
T Consensus 1 ~iiFD~DGTL~ds~-------~~~~~~~~~~~~~ 27 (185)
T TIGR01990 1 AVIFDLDGVITDTA-------EYHYLAWKALADE 27 (185)
T ss_pred CeEEcCCCccccCh-------HHHHHHHHHHHHH
Confidence 47999999999843 3455556666653
No 259
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=63.95 E-value=8 Score=39.23 Aligned_cols=16 Identities=38% Similarity=0.696 Sum_probs=13.6
Q ss_pred ceeEEecCCCcCCCCC
Q 004314 591 SRAILFDYDGTVMPQT 606 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~ 606 (761)
.++++||+||||+...
T Consensus 2 ~~~viFDlDGTL~ds~ 17 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTS 17 (221)
T ss_pred ceEEEEeCCCCCcCCC
Confidence 4789999999999843
No 260
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=62.16 E-value=7 Score=40.31 Aligned_cols=15 Identities=53% Similarity=0.981 Sum_probs=13.1
Q ss_pred ceeEEecCCCcCCCC
Q 004314 591 SRAILFDYDGTVMPQ 605 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~ 605 (761)
.++|+||+||||++.
T Consensus 12 ~k~viFD~DGTL~Ds 26 (229)
T PRK13226 12 PRAVLFDLDGTLLDS 26 (229)
T ss_pred CCEEEEcCcCccccC
Confidence 368999999999984
No 261
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=62.09 E-value=4.9 Score=40.75 Aligned_cols=16 Identities=31% Similarity=0.621 Sum_probs=13.6
Q ss_pred ceeEEecCCCcCCCCC
Q 004314 591 SRAILFDYDGTVMPQT 606 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~ 606 (761)
.|+|+||+||||++..
T Consensus 1 ~k~viFD~DGTL~d~~ 16 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQ 16 (224)
T ss_pred CCEEEEcCcCcccccc
Confidence 3789999999999844
No 262
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=60.79 E-value=4.4 Score=42.84 Aligned_cols=31 Identities=16% Similarity=0.203 Sum_probs=22.9
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 616 VISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 616 ~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+.++|+.|.+ .+..++|+||.....+...+.
T Consensus 106 ~~elL~~L~~-~g~~l~I~T~~~~~~~~~~l~ 136 (267)
T PRK13478 106 VLEVIAALRA-RGIKIGSTTGYTREMMDVVVP 136 (267)
T ss_pred HHHHHHHHHH-CCCEEEEEcCCcHHHHHHHHH
Confidence 3456677775 578899999999887766664
No 263
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=60.51 E-value=20 Score=39.73 Aligned_cols=134 Identities=21% Similarity=0.277 Sum_probs=78.6
Q ss_pred Cccccc----CCHHHHHHHHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhc
Q 004314 571 DPNFRK----LSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWF 646 (761)
Q Consensus 571 ~~~f~~----l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f 646 (761)
.|+|.. |+..+|..--+..+-+|+-||=|+||-++.. .-.++..++.-|-+|-+ .+..|.|||.-++....+|.
T Consensus 123 ~PSFNDvR~ILN~AQi~al~~~~~L~LvTFDgDvTLY~DG~-sl~~d~pvi~~ii~LL~-~gv~VgIVTAAGY~~a~kY~ 200 (408)
T PF06437_consen 123 PPSFNDVRHILNTAQIMALAKNYGLKLVTFDGDVTLYEDGA-SLEPDNPVIPRIIKLLR-RGVKVGIVTAAGYPGAEKYE 200 (408)
T ss_pred CCCHHHHHHHHHHHHHHHhcccCCceEEEEcCCcccccCCC-CCCCCchHHHHHHHHHh-cCCeEEEEeCCCCCChHHHH
Confidence 455542 3444444443334679999999999998762 22345566666666665 48999999998887655543
Q ss_pred c----------C---C-----CC-ceEEccCCeEEeecCC----------cceeecCcCcCcchH-HHHHHHHHH-----
Q 004314 647 S----------P---C-----KK-LGIAAEHGYFMRWSAD----------EEWQNCGQSVDFGWI-QIAEPVMKL----- 691 (761)
Q Consensus 647 ~----------~---~-----~~-l~liaehGa~ir~~~~----------~~w~~~~~~~~~~w~-~~v~~im~~----- 691 (761)
. . + .+ +-+-+|--+.++...+ .+|.. +....|. +.+..+|+.
T Consensus 201 ~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~---~~m~~W~~~dI~~lLD~AE~~L 277 (408)
T PF06437_consen 201 ERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLL---PEMKTWSEEDITELLDIAEAAL 277 (408)
T ss_pred HHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccC---ccccCcCHHHHHHHHHHHHHHH
Confidence 2 1 1 12 2256777777776532 34542 2235675 344445432
Q ss_pred --Hhc--CCCccEEEecCceEEE
Q 004314 692 --YTE--STDGSYIEIKESALVW 710 (761)
Q Consensus 692 --y~~--~t~Gs~iE~k~~~l~~ 710 (761)
... ..| ..|-.|+-++-.
T Consensus 278 ~~~~~~l~Lp-a~IiRK~RAVGi 299 (408)
T PF06437_consen 278 RDCVKRLNLP-ATIIRKERAVGI 299 (408)
T ss_pred HHHHHHcCCC-eeEEeecceeeE
Confidence 222 345 666677766533
No 264
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=59.93 E-value=5.4 Score=40.82 Aligned_cols=33 Identities=9% Similarity=0.205 Sum_probs=23.0
Q ss_pred HHHHHHHH-HHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 614 QAVISIIN-TLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 614 ~~~~~~L~-~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+.+.+.|+ .+.+ .|..++|||+.....++.+..
T Consensus 97 pga~e~L~~~l~~-~G~~v~IvSas~~~~~~~ia~ 130 (210)
T TIGR01545 97 PLVAERLRQYLES-SDADIWLITGSPQPLVEAVYF 130 (210)
T ss_pred ccHHHHHHHHHHh-CCCEEEEEcCCcHHHHHHHHH
Confidence 44556664 4553 588889999988888877763
No 265
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=59.51 E-value=57 Score=35.47 Aligned_cols=111 Identities=14% Similarity=0.122 Sum_probs=73.1
Q ss_pred cCccccCChHHHHHHHHHHHHhCCCCcCceeEEE-EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCC
Q 004314 343 DDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ-IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV 421 (761)
Q Consensus 343 dRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq-i~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v 421 (761)
-.=|++-.+...|+++.+.+.. ++..+. .+.|+ ..+++.++|.+.+.++ ||. ..+..+++.+
T Consensus 153 NSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~-----gn~~Yi~~V~~~~~~l---F~~---~~~~~L~e~l 215 (322)
T PRK02797 153 NSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA-----NNQAYIEEVRQAGLAL---FGA---ENFQILTEKL 215 (322)
T ss_pred CCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC-----CCHHHHHHHHHHHHHh---cCc---ccEEehhhhC
Confidence 4568888888888877665422 232322 23332 1256677777776654 543 2477788999
Q ss_pred CHHHHHHHHHhcccceecccc-cCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc
Q 004314 422 TLSERAAYYTIAECVVVTAVR-DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL 488 (761)
Q Consensus 422 ~~~el~aly~~ADv~vvtS~~-EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (761)
+.+|..++++.+|+.++.--| .|+|...+= +..| .|+++|+-.-.-..+
T Consensus 216 ~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lL-i~~G-----------------~~v~l~r~n~fwqdl 265 (322)
T PRK02797 216 PFDDYLALLRQCDLGYFIFARQQGIGTLCLL-IQLG-----------------KPVVLSRDNPFWQDL 265 (322)
T ss_pred CHHHHHHHHHhCCEEEEeechhhHHhHHHHH-HHCC-----------------CcEEEecCCchHHHH
Confidence 999999999999999998764 999877653 2222 377777655444445
No 266
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=59.20 E-value=5.1 Score=39.62 Aligned_cols=13 Identities=38% Similarity=0.769 Sum_probs=11.6
Q ss_pred eEEecCCCcCCCC
Q 004314 593 AILFDYDGTVMPQ 605 (761)
Q Consensus 593 lI~lDyDGTL~~~ 605 (761)
+|+||+||||++.
T Consensus 2 ~viFDlDGTL~ds 14 (184)
T TIGR01993 2 VWFFDLDNTLYPH 14 (184)
T ss_pred eEEEeCCCCCCCC
Confidence 6899999999974
No 267
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=58.89 E-value=3.8e+02 Score=32.05 Aligned_cols=27 Identities=11% Similarity=0.197 Sum_probs=24.4
Q ss_pred HHHHHHhcccceecccccCCCcchhhheeeec
Q 004314 426 RAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (761)
Q Consensus 426 l~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 457 (761)
-..++++||+++++| |.+.+|++.+|.
T Consensus 482 ~~~~m~aaD~aLaaS-----GTaTLEaAL~g~ 508 (608)
T PRK01021 482 RYELMRECDCALAKC-----GTIVLETALNQT 508 (608)
T ss_pred hHHHHHhcCeeeecC-----CHHHHHHHHhCC
Confidence 368999999999999 789999999986
No 268
>PRK09449 dUMP phosphatase; Provisional
Probab=58.44 E-value=5.2 Score=40.83 Aligned_cols=14 Identities=43% Similarity=0.487 Sum_probs=12.7
Q ss_pred ceeEEecCCCcCCC
Q 004314 591 SRAILFDYDGTVMP 604 (761)
Q Consensus 591 ~rlI~lDyDGTL~~ 604 (761)
.|.|+||+||||++
T Consensus 3 ~k~iiFDlDGTLid 16 (224)
T PRK09449 3 YDWILFDADETLFH 16 (224)
T ss_pred ccEEEEcCCCchhc
Confidence 57899999999996
No 269
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=57.90 E-value=7.9 Score=36.83 Aligned_cols=13 Identities=62% Similarity=0.976 Sum_probs=11.3
Q ss_pred eEEecCCCcCCCC
Q 004314 593 AILFDYDGTVMPQ 605 (761)
Q Consensus 593 lI~lDyDGTL~~~ 605 (761)
+|++|+||||++.
T Consensus 1 ~iifD~DGTL~d~ 13 (154)
T TIGR01549 1 AILFDIDGTLVDS 13 (154)
T ss_pred CeEecCCCccccc
Confidence 4789999999984
No 270
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=55.52 E-value=1.2e+02 Score=28.96 Aligned_cols=69 Identities=19% Similarity=0.268 Sum_probs=48.1
Q ss_pred HHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhc
Q 004314 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIA 433 (761)
Q Consensus 355 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~A 433 (761)
+..+.++.++++ +..+.||.|...+|.. .+....+.+.++++..+|+- ||.+..+..+..+-...|..+
T Consensus 43 ~~~l~~~i~~~~-----i~~iVvGlP~~~~G~~-~~~~~~v~~f~~~L~~~~~~----~v~~~DEr~TT~~A~~~l~~~ 111 (138)
T PRK00109 43 WDRLEKLIKEWQ-----PDGLVVGLPLNMDGTE-GPRTERARKFANRLEGRFGL----PVVLVDERLSTVEAERALADV 111 (138)
T ss_pred HHHHHHHHHHhC-----CCEEEEeccCCCCCCc-CHHHHHHHHHHHHHHHHhCC----CEEEEcCCcCHHHHHHHHHHc
Confidence 556666666653 4477799998766544 34456677777777766632 799999998888777777654
No 271
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=55.31 E-value=74 Score=30.00 Aligned_cols=71 Identities=20% Similarity=0.285 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHh
Q 004314 353 LKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI 432 (761)
Q Consensus 353 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ 432 (761)
..+.++..+.+++. +..+.||-|-..+|.. .+....+++.++++..+|+- ||.++.+..+..+-...|..
T Consensus 35 ~~~~~l~~~i~~~~-----~~~iVvGlP~~~dG~~-~~~a~~v~~f~~~L~~~~~~----~v~~~DEr~TT~~A~~~l~~ 104 (130)
T TIGR00250 35 PDWSRIEELLKEWT-----PDKIVVGLPLNMDGTE-GPLTERAQKFANRLEGRFGV----PVVLWDERLSTVEAESGLFA 104 (130)
T ss_pred HHHHHHHHHHHHcC-----CCEEEEeccCCCCcCc-CHHHHHHHHHHHHHHHHhCC----CEEEEcCCcCHHHHHHHHHH
Confidence 44677777777664 3467789888777655 34556788888888877743 79999998888877777765
Q ss_pred c
Q 004314 433 A 433 (761)
Q Consensus 433 A 433 (761)
+
T Consensus 105 ~ 105 (130)
T TIGR00250 105 R 105 (130)
T ss_pred c
Confidence 3
No 272
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.57 E-value=41 Score=37.36 Aligned_cols=114 Identities=12% Similarity=0.132 Sum_probs=75.2
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceeccc---ccCC---CcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccc
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAV---RDGM---NLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS 487 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~---~EGm---nLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 487 (761)
+.+++...+...+...|+.-|+.+.=+. -++. +.-..|+++|+ |+++.+--.+.---
T Consensus 239 ~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~-----------------~~liT~~~~~~e~~ 301 (373)
T COG4641 239 VQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCG-----------------GFLITDYWKDLEKF 301 (373)
T ss_pred hhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcC-----------------CccccccHHHHHHh
Confidence 4555444445778888888888765333 2443 88899999996 46665544443222
Q ss_pred cc-C-cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHHHHHHH
Q 004314 488 LS-G-AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQDMER 546 (761)
Q Consensus 488 l~-~-al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l~~l~~ 546 (761)
+. | .+++ -.|..++.+.+...+.-+ +||++..+.+++.|. .|+-..=+..++..+..
T Consensus 302 f~pgk~~iv-~~d~kdl~~~~~yll~h~-~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~s 361 (373)
T COG4641 302 FKPGKDIIV-YQDSKDLKEKLKYLLNHP-DERKEIAECAYERVLARHTYEERIFKLLNEIAS 361 (373)
T ss_pred cCCchheEE-ecCHHHHHHHHHHHhcCc-chHHHHHHhhHHHHHHhccHHHHHHHHHHHHHH
Confidence 32 3 3434 358899999999999876 478888888888875 46655555555655554
No 273
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=53.25 E-value=7 Score=39.04 Aligned_cols=14 Identities=36% Similarity=0.662 Sum_probs=12.5
Q ss_pred eeEEecCCCcCCCC
Q 004314 592 RAILFDYDGTVMPQ 605 (761)
Q Consensus 592 rlI~lDyDGTL~~~ 605 (761)
|+|+||+||||++.
T Consensus 2 k~viFD~dgTLiD~ 15 (198)
T TIGR01428 2 KALVFDVYGTLFDV 15 (198)
T ss_pred cEEEEeCCCcCccH
Confidence 68999999999984
No 274
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=53.21 E-value=9 Score=38.53 Aligned_cols=25 Identities=16% Similarity=0.340 Sum_probs=0.0
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHHh
Q 004314 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCN 625 (761)
Q Consensus 594 I~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~ 625 (761)
|+||+||||++ ..+-..+++++..+
T Consensus 1 iiFDlDGTL~D-------s~~~~~~~~~~~~~ 25 (205)
T TIGR01454 1 VVFDLDGVLVD-------SFAVMREAFAIAYR 25 (205)
T ss_pred CeecCcCcccc-------CHHHHHHHHHHHHH
No 275
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=52.25 E-value=1.7e+02 Score=30.17 Aligned_cols=45 Identities=27% Similarity=0.348 Sum_probs=26.6
Q ss_pred eEEEcCCCCCccccc--C---cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Q 004314 475 MLVVSEFIGCSPSLS--G---AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEK 523 (761)
Q Consensus 475 ~lV~Se~~G~~~~l~--~---al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 523 (761)
|++.-|-+|++--+. | .+=|+|.+--++|.||+- +| +|.+.|.++
T Consensus 187 Pii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRl--SM--EEer~rQe~ 236 (259)
T KOG2884|consen 187 PIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRL--SM--EEERARQER 236 (259)
T ss_pred ceeccCcccccccccccccccccCCCcccCHHHHHHHHh--hH--HHHHHHHHH
Confidence 566555444443332 1 356788877789988874 33 355555554
No 276
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=50.89 E-value=7 Score=39.81 Aligned_cols=36 Identities=11% Similarity=0.141 Sum_probs=28.4
Q ss_pred CCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 611 APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 611 ~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
.+.+.+.+.|+.|.+. ..++|+||-....++..+..
T Consensus 68 ~l~pga~ell~~lk~~--~~~~IVS~~~~~~~~~il~~ 103 (203)
T TIGR02137 68 KPLEGAVEFVDWLRER--FQVVILSDTFYEFSQPLMRQ 103 (203)
T ss_pred CCCccHHHHHHHHHhC--CeEEEEeCChHHHHHHHHHH
Confidence 3567788888888863 49999999999888877654
No 277
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=50.83 E-value=7.1 Score=38.05 Aligned_cols=13 Identities=38% Similarity=0.636 Sum_probs=11.3
Q ss_pred eEEecCCCcCCCC
Q 004314 593 AILFDYDGTVMPQ 605 (761)
Q Consensus 593 lI~lDyDGTL~~~ 605 (761)
+|+||+||||++.
T Consensus 1 ~viFD~DGTL~D~ 13 (175)
T TIGR01493 1 AMVFDVYGTLVDV 13 (175)
T ss_pred CeEEecCCcCccc
Confidence 4789999999984
No 278
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=50.35 E-value=12 Score=40.12 Aligned_cols=59 Identities=19% Similarity=0.316 Sum_probs=44.9
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCce
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLG 653 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~ 653 (761)
+.-.+++|-||.|.. ...+-+.+.++|+.|.+. +..++++|-.+..+.++++.....+|
T Consensus 21 ~~DtfifDcDGVlW~----g~~~ipGs~e~l~~L~~~-gK~i~fvTNNStksr~~y~kK~~~lG 79 (306)
T KOG2882|consen 21 SFDTFIFDCDGVLWL----GEKPIPGSPEALNLLKSL-GKQIIFVTNNSTKSREQYMKKFAKLG 79 (306)
T ss_pred hcCEEEEcCCcceee----cCCCCCChHHHHHHHHHc-CCcEEEEeCCCcchHHHHHHHHHHhC
Confidence 466899999999987 334556788888888875 57899999999888888876443343
No 279
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=50.10 E-value=12 Score=37.69 Aligned_cols=29 Identities=24% Similarity=0.423 Sum_probs=0.0
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCC
Q 004314 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARN 629 (761)
Q Consensus 594 I~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n 629 (761)
|+||+||||++ -.+.....++.+.+.-+.
T Consensus 1 viFD~DGTL~D-------s~~~~~~~~~~~~~~~~~ 29 (213)
T TIGR01449 1 VLFDLDGTLVD-------SAPDIAAAVNMALAALGL 29 (213)
T ss_pred CeecCCCcccc-------CHHHHHHHHHHHHHHCCC
No 280
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=49.46 E-value=14 Score=34.90 Aligned_cols=48 Identities=15% Similarity=0.061 Sum_probs=38.2
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 594 I~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
.+.++++|++.- -..-+++.+.++.|.. ...|+|+||-.+.++.+...
T Consensus 17 ~~~~v~~tiatg----Gklf~ev~e~iqeL~d--~V~i~IASgDr~gsl~~lae 64 (152)
T COG4087 17 KAGKVLYTIATG----GKLFSEVSETIQELHD--MVDIYIASGDRKGSLVQLAE 64 (152)
T ss_pred ecceEEEEEccC----cEEcHhhHHHHHHHHH--hheEEEecCCcchHHHHHHH
Confidence 357888998862 2344689999999995 38999999999999988775
No 281
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=49.05 E-value=8.5 Score=38.88 Aligned_cols=15 Identities=33% Similarity=1.001 Sum_probs=12.9
Q ss_pred ceeEEecCCCcCCCC
Q 004314 591 SRAILFDYDGTVMPQ 605 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~ 605 (761)
.+.|+||+||||++.
T Consensus 2 ik~viFDldGtL~d~ 16 (211)
T TIGR02247 2 IKAVIFDFGGVLLPS 16 (211)
T ss_pred ceEEEEecCCceecC
Confidence 468999999999983
No 282
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=47.66 E-value=41 Score=30.29 Aligned_cols=29 Identities=17% Similarity=0.393 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHhCCCCcCceeEEEEecCCCCC
Q 004314 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGR 384 (761)
Q Consensus 352 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~ 384 (761)
..|...++++++.+|+.+ +|.||.....+
T Consensus 49 ~~K~~~i~~i~~~fP~~k----fiLIGDsgq~D 77 (100)
T PF09949_consen 49 EHKRDNIERILRDFPERK----FILIGDSGQHD 77 (100)
T ss_pred hHHHHHHHHHHHHCCCCc----EEEEeeCCCcC
Confidence 588899999999999987 88888765444
No 283
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=47.52 E-value=4.5e+02 Score=29.47 Aligned_cols=80 Identities=19% Similarity=0.247 Sum_probs=43.6
Q ss_pred CceeEEEEecCCCC--CchhHHHHHHHHHHHHHHHhccc-CCCCCccEEEEc-CCCCHHHHHHHHHhcccceecccccCC
Q 004314 370 GRAVLVQIANPARG--RGKDLEEIQAEIHATCKRINETF-GRPGYEPVVFID-KPVTLSERAAYYTIAECVVVTAVRDGM 445 (761)
Q Consensus 370 ~~vvLvqi~~p~r~--~~~~~~~l~~ev~~lv~~in~~~-g~~~~~pV~~~~-~~v~~~el~aly~~ADv~vvtS~~EGm 445 (761)
+++.|.+.++|-.- +....++| .++.+++.+-|.+- +..-+.++++.+ .+++..-+..-+ +-.++.++|-.-+|
T Consensus 157 ~~vkl~iLCnPHNP~Grvwt~eeL-~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~-a~~~it~~saSKtF 234 (388)
T COG1168 157 ERVKLFILCNPHNPTGRVWTKEEL-RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERF-ADNSITLTSASKTF 234 (388)
T ss_pred CCccEEEEeCCCCCCCccccHHHH-HHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhh-hcceEEEeeccccc
Confidence 34667788888643 33444454 56677777655332 122345566554 455555444433 23344556666777
Q ss_pred Ccchhh
Q 004314 446 NLTPYE 451 (761)
Q Consensus 446 nLv~~E 451 (761)
||..+.
T Consensus 235 NlaGL~ 240 (388)
T COG1168 235 NLAGLK 240 (388)
T ss_pred cchhhh
Confidence 776555
No 284
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=46.51 E-value=15 Score=40.77 Aligned_cols=84 Identities=24% Similarity=0.281 Sum_probs=52.1
Q ss_pred hccceeEEecCCCcCCCCCCCC---------CCCCHHHHHHHHHHHhcCCCeEEEEcCC-----Chhh-------HHhhc
Q 004314 588 RSKSRAILFDYDGTVMPQTSIN---------KAPSQAVISIINTLCNDARNTVFVVSGR-----GRDC-------LGKWF 646 (761)
Q Consensus 588 ~s~~rlI~lDyDGTL~~~~~~~---------~~p~~~~~~~L~~L~~d~~n~V~IvSGR-----~~~~-------L~~~f 646 (761)
+-..+.|++||||||..-.+.. ....++.-+-|.+|.+| +...+|.|-. ..-. ++..+
T Consensus 72 ~~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~-g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~ 150 (422)
T KOG2134|consen 72 NGGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQD-GIKLFIFTNQNGIARGKLELEEFKKKIKAIV 150 (422)
T ss_pred CCCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccC-CeEEEEEecccccccCcchHHHHHHHHHHHH
Confidence 3457899999999999755311 12235667778888874 8888877632 2212 33333
Q ss_pred cC--CCCceEEccCCeEEeecCCcceee
Q 004314 647 SP--CKKLGIAAEHGYFMRWSADEEWQN 672 (761)
Q Consensus 647 ~~--~~~l~liaehGa~ir~~~~~~w~~ 672 (761)
+. +|=.-++|.++-.+|.|-.+.|+.
T Consensus 151 anl~vPi~~~~A~~~~~yRKP~tGMwe~ 178 (422)
T KOG2134|consen 151 ANLGVPIQLLAAIIKGKYRKPSTGMWEF 178 (422)
T ss_pred HhcCCceEEeeeccCCcccCcchhHHHH
Confidence 33 243346677777778776556663
No 285
>PRK14986 glycogen phosphorylase; Provisional
Probab=45.99 E-value=2.6e+02 Score=34.58 Aligned_cols=136 Identities=15% Similarity=0.062 Sum_probs=82.6
Q ss_pred CCeEEEeecCccccCChHH-HHHHHHHHH--HhCCCCc-CceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 004314 335 GKTVLLGVDDMDIFKGVDL-KLLAMEHLL--KQHPKWQ-GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPG 410 (761)
Q Consensus 335 ~~~vil~VdRld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~ 410 (761)
+...++.+-|+..-|-..+ .|..++++. ..+|+.. ..+++|..|-+..++. .-.++-+.|.++++-||..=...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYY-MAKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH-HHHHHHHHHHHHHHHhccChhhcC
Confidence 4567788999998888777 777766663 4566532 2456665554443332 234556677788887774311112
Q ss_pred CccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc
Q 004314 411 YEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL 488 (761)
Q Consensus 411 ~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (761)
.-.|+|+. ...-.--..++.+|||-.-+|. .++| |||+++-+. .-.|.|-+|..-|+-.++
T Consensus 621 ~lkVVFle-nY~vslAe~lipg~Dv~eqis~------ag~E--ASGTsnMK~--------alNGaLtlgtlDG~nvEi 681 (815)
T PRK14986 621 KLKVVFIP-NYSVSLAQLIIPAADLSEQISL------AGTE--ASGTSNMKF--------ALNGALTIGTLDGANVEM 681 (815)
T ss_pred ceeEEEeC-CCCHHHHHHhhhhhhhhhhCCC------CCcc--ccCcchhhH--------HhcCceeeeccCCchhHH
Confidence 22588886 4566666778999999888876 4555 344432211 124567777777755444
No 286
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=45.93 E-value=25 Score=41.51 Aligned_cols=65 Identities=11% Similarity=0.123 Sum_probs=51.7
Q ss_pred HHHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCC-CeEEEEcCCChhhHHhhccCC
Q 004314 584 SAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDAR-NTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 584 ~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~-n~V~IvSGR~~~~L~~~f~~~ 649 (761)
..+.....+.+++..||+++..-.....+.+++.+.|++|.+ .+ ..++|+||......++....+
T Consensus 357 ~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~-~g~i~v~ivTgd~~~~a~~i~~~l 422 (556)
T TIGR01525 357 NEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKR-AGGIKLVMLTGDNRSAAEAVAAEL 422 (556)
T ss_pred HHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHH-cCCCeEEEEeCCCHHHHHHHHHHh
Confidence 445556678899999998876433445678999999999986 57 899999999999888887653
No 287
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=44.22 E-value=36 Score=33.78 Aligned_cols=67 Identities=18% Similarity=0.227 Sum_probs=47.7
Q ss_pred cCCHHHHHHHHHhccceeEEecCCCcCCCCCC-------------C-----------------CCCCCHHHHHHHHHHHh
Q 004314 576 KLSIDAIVSAYLRSKSRAILFDYDGTVMPQTS-------------I-----------------NKAPSQAVISIINTLCN 625 (761)
Q Consensus 576 ~l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~-------------~-----------------~~~p~~~~~~~L~~L~~ 625 (761)
-.++.+|.......+.-.+-||+|.|++=.++ . .-.++.++...|-.+..
T Consensus 48 wiSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq 127 (237)
T COG3700 48 WISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQ 127 (237)
T ss_pred EEEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHH
Confidence 45778888887777777888999999984221 0 11244666666666666
Q ss_pred cCCCeEEEEcCCChhhH
Q 004314 626 DARNTVFVVSGRGRDCL 642 (761)
Q Consensus 626 d~~n~V~IvSGR~~~~L 642 (761)
..+-.++.+|||.....
T Consensus 128 ~RGD~i~FvTGRt~gk~ 144 (237)
T COG3700 128 RRGDAIYFVTGRTPGKT 144 (237)
T ss_pred hcCCeEEEEecCCCCcc
Confidence 67899999999997643
No 288
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=44.14 E-value=11 Score=43.25 Aligned_cols=14 Identities=43% Similarity=0.904 Sum_probs=12.6
Q ss_pred eeEEecCCCcCCCC
Q 004314 592 RAILFDYDGTVMPQ 605 (761)
Q Consensus 592 rlI~lDyDGTL~~~ 605 (761)
+.++||+||||++.
T Consensus 242 k~vIFDlDGTLiDs 255 (459)
T PRK06698 242 QALIFDMDGTLFQT 255 (459)
T ss_pred hheeEccCCceecc
Confidence 68999999999984
No 289
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=43.31 E-value=12 Score=41.83 Aligned_cols=73 Identities=15% Similarity=0.197 Sum_probs=47.4
Q ss_pred hccceeEEecCCCcCCCCCCC-------C-CCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCC
Q 004314 588 RSKSRAILFDYDGTVMPQTSI-------N-KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHG 659 (761)
Q Consensus 588 ~s~~rlI~lDyDGTL~~~~~~-------~-~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehG 659 (761)
+...+++++|+|||++...-. . -.-+..+.++...+.++ +..|.-.|.|++-.+...-.. +..+.+||
T Consensus 372 r~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rN-GYkI~YltsR~~Gqa~sTrsy---lrnieQng 447 (580)
T COG5083 372 RNNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRN-GYKIKYLTSRSYGQADSTRSY---LRNIEQNG 447 (580)
T ss_pred eCCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccC-ceEEEEEecccccchhhhhhH---HHhhhhcC
Confidence 356789999999999873310 1 12234555666666643 567878888988776554432 55778888
Q ss_pred eEEee
Q 004314 660 YFMRW 664 (761)
Q Consensus 660 a~ir~ 664 (761)
+.+-.
T Consensus 448 ykLpd 452 (580)
T COG5083 448 YKLPD 452 (580)
T ss_pred ccCCC
Confidence 87643
No 290
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=40.98 E-value=1.2e+02 Score=32.33 Aligned_cols=115 Identities=19% Similarity=0.148 Sum_probs=68.3
Q ss_pred CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~p 413 (761)
++++|++++|-.+.. ..+++ ++..|+++ ++.+|.+. .+. + ..+
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~----l~~~~~~~----~~v~g~~~----~~~----------------~-----~~n 233 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEA----LKALPDYQ----FIVFGPNA----ADP----------------R-----PGN 233 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHH----HHhCCCCe----EEEEcCCc----ccc----------------c-----CCC
Confidence 467899999988766 33333 34466655 55554221 000 0 113
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc-----
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL----- 488 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l----- 488 (761)
|.+. ..+..++..+++.||++|..+ |+| +..|++++|. |+|+=...|..|+.
T Consensus 234 i~~~--~~~~~~~~~~m~~ad~vIs~~---G~~-t~~Ea~~~g~-----------------P~l~ip~~~~~EQ~~~a~~ 290 (318)
T PF13528_consen 234 IHVR--PFSTPDFAELMAAADLVISKG---GYT-TISEALALGK-----------------PALVIPRPGQDEQEYNARK 290 (318)
T ss_pred EEEe--ecChHHHHHHHHhCCEEEECC---CHH-HHHHHHHcCC-----------------CEEEEeCCCCchHHHHHHH
Confidence 5543 344578999999999988764 555 4789999986 34433344544443
Q ss_pred -c--C-cEEECCC--CHHHHHHHHHH
Q 004314 489 -S--G-AIRVNPW--NIEATAEAMHE 508 (761)
Q Consensus 489 -~--~-al~VnP~--d~~~~A~ai~~ 508 (761)
. | ++.+++. +.+.++++|++
T Consensus 291 l~~~G~~~~~~~~~~~~~~l~~~l~~ 316 (318)
T PF13528_consen 291 LEELGLGIVLSQEDLTPERLAEFLER 316 (318)
T ss_pred HHHCCCeEEcccccCCHHHHHHHHhc
Confidence 1 3 4555544 45777777764
No 291
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=40.91 E-value=11 Score=36.55 Aligned_cols=13 Identities=54% Similarity=0.925 Sum_probs=11.2
Q ss_pred eEEecCCCcCCCC
Q 004314 593 AILFDYDGTVMPQ 605 (761)
Q Consensus 593 lI~lDyDGTL~~~ 605 (761)
.++||+||||++.
T Consensus 1 ~vlFDlDgtLv~~ 13 (183)
T TIGR01509 1 AILFDLDGVLVDT 13 (183)
T ss_pred CeeeccCCceech
Confidence 3789999999985
No 292
>PLN00414 glycosyltransferase family protein
Probab=40.59 E-value=5.9e+02 Score=29.23 Aligned_cols=108 Identities=14% Similarity=0.186 Sum_probs=61.2
Q ss_pred cCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEc----CCCCCcccc----c
Q 004314 418 DKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS----EFIGCSPSL----S 489 (761)
Q Consensus 418 ~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~S----e~~G~~~~l----~ 489 (761)
.+-+|+.++.+. .+.++||- +-|+| ..+|++++|. |+|+= |..-.+..+ .
T Consensus 317 ~~w~PQ~~vL~h-~~v~~fvt---H~G~n-S~~Ea~~~Gv-----------------P~l~~P~~~dQ~~na~~~~~~~g 374 (446)
T PLN00414 317 EGWVEQPLILSH-PSVGCFVN---HCGFG-SMWESLVSDC-----------------QIVFIPQLADQVLITRLLTEELE 374 (446)
T ss_pred eccCCHHHHhcC-CccceEEe---cCchh-HHHHHHHcCC-----------------CEEecCcccchHHHHHHHHHHhC
Confidence 356788776543 22244442 46776 6689999976 44432 211122222 1
Q ss_pred CcEEECC-----CCHHHHHHHHHHHHcCCHHH---HHHHHHHHhhHHhh-CCHHHHHHHHHHHHHHH
Q 004314 490 GAIRVNP-----WNIEATAEAMHEAIQMNEAE---KQLRHEKHYRYVST-HDVAYWARSFFQDMERT 547 (761)
Q Consensus 490 ~al~VnP-----~d~~~~A~ai~~aL~m~~~e---r~~r~~~~~~~v~~-~~~~~Wa~~~l~~l~~~ 547 (761)
-|+.+.. -+.+++++++++++..+.++ .+++.++.++.+.+ -....+.++|++++.+.
T Consensus 375 ~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~gg~ss~l~~~v~~~~~~ 441 (446)
T PLN00414 375 VSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSPGLLSGYADKFVEALENE 441 (446)
T ss_pred eEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Confidence 2566632 47899999999999865322 23333344444433 33256688888888553
No 293
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=40.44 E-value=16 Score=36.72 Aligned_cols=14 Identities=14% Similarity=0.323 Sum_probs=12.5
Q ss_pred eeEEecCCCcCCCC
Q 004314 592 RAILFDYDGTVMPQ 605 (761)
Q Consensus 592 rlI~lDyDGTL~~~ 605 (761)
++|+||+||||++.
T Consensus 1 ~~viFDldgvL~d~ 14 (199)
T PRK09456 1 MLYIFDLGNVIVDI 14 (199)
T ss_pred CEEEEeCCCccccC
Confidence 48999999999985
No 294
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=39.43 E-value=4.5e+02 Score=32.57 Aligned_cols=137 Identities=15% Similarity=0.070 Sum_probs=81.8
Q ss_pred CCCeEEEeecCccccCChHH-HHHHHHHHH--HhCCCCc-CceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 004314 334 EGKTVLLGVDDMDIFKGVDL-KLLAMEHLL--KQHPKWQ-GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP 409 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~ 409 (761)
++...++.+-|+..-|-..+ .|.-++++. ..+|+.. ..+++|..|-...++. .-.++-+.+..+++.||..=.-.
T Consensus 528 p~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~~in~Dp~v~ 606 (797)
T cd04300 528 PDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYY-MAKLIIKLINAVADVVNNDPDVG 606 (797)
T ss_pred CCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcH-HHHHHHHHHHHHHHHhccChhcC
Confidence 35667888999999998777 666655553 3456522 2355665554443332 23455677788888888531112
Q ss_pred CCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc
Q 004314 410 GYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL 488 (761)
Q Consensus 410 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (761)
++-.|+|+. ...-.--..++.+|||-.-+|+ .++| |||+++-+. .-.|.|-+|..-|+-.++
T Consensus 607 ~~lkVVFle-nY~VslAe~iipaaDvseqis~------ag~E--ASGTsnMK~--------~lNGaltlgtlDGanvEi 668 (797)
T cd04300 607 DKLKVVFLP-NYNVSLAEKIIPAADLSEQIST------AGKE--ASGTGNMKF--------MLNGALTIGTLDGANVEI 668 (797)
T ss_pred CceEEEEeC-CCChHHHHHhhhhhhhhhhCCC------CCcc--ccCCchhhH--------HhcCceeeecccchhHHH
Confidence 233588886 4556666678999999877775 4555 344433221 123566666666654443
No 295
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=39.39 E-value=23 Score=38.31 Aligned_cols=44 Identities=23% Similarity=0.518 Sum_probs=32.9
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCC---e-EEEEcCCC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARN---T-VFVVSGRG 638 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n---~-V~IvSGR~ 638 (761)
.--|+||+||.|.. ...|-++..++|+.|.+++++ . |++.-|-+
T Consensus 35 ~fgfafDIDGVL~R----G~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg 82 (389)
T KOG1618|consen 35 TFGFAFDIDGVLFR----GHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGG 82 (389)
T ss_pred ceeEEEecccEEEe----cCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCC
Confidence 44799999999997 556778999999999976544 3 34554544
No 296
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=38.92 E-value=14 Score=36.26 Aligned_cols=29 Identities=21% Similarity=0.259 Sum_probs=20.3
Q ss_pred HHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 618 SIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 618 ~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+.|+.+.+ .+..|+|+||-....++..+.
T Consensus 96 e~i~~~~~-~~~~v~IvS~~~~~~i~~~~~ 124 (192)
T PF12710_consen 96 ELIRELKD-NGIKVVIVSGSPDEIIEPIAE 124 (192)
T ss_dssp HHHHHHHH-TTSEEEEEEEEEHHHHHHHHH
T ss_pred HHHHHHHH-CCCEEEEECCCcHHHHHHHHH
Confidence 55555553 478888888887777777764
No 297
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=38.53 E-value=72 Score=33.10 Aligned_cols=61 Identities=11% Similarity=0.221 Sum_probs=38.9
Q ss_pred CHHHHHHHHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcC--CChhhHHhhcc
Q 004314 578 SIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSG--RGRDCLGKWFS 647 (761)
Q Consensus 578 ~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSG--R~~~~L~~~f~ 647 (761)
+..++++.|...-..+++.|.|||+.... ...++++++++..... +.++| |+.+++++++.
T Consensus 31 dp~~~a~~~~~~~~~l~ivDldga~~g~~--------~n~~~i~~i~~~~~~p-v~~gGGIrs~edv~~l~~ 93 (228)
T PRK04128 31 DPVEIALRFSEYVDKIHVVDLDGAFEGKP--------KNLDVVKNIIRETGLK-VQVGGGLRTYESIKDAYE 93 (228)
T ss_pred CHHHHHHHHHHhCCEEEEEECcchhcCCc--------chHHHHHHHHhhCCCC-EEEcCCCCCHHHHHHHHH
Confidence 67788888877656799999999986531 2345555555432222 34444 55667777665
No 298
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=37.89 E-value=18 Score=36.76 Aligned_cols=17 Identities=47% Similarity=0.720 Sum_probs=14.6
Q ss_pred cceeEEecCCCcCCCCC
Q 004314 590 KSRAILFDYDGTVMPQT 606 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~ 606 (761)
..|.|+||+||||.+..
T Consensus 3 ~~k~i~FD~d~TL~d~~ 19 (229)
T COG1011 3 MIKAILFDLDGTLLDFD 19 (229)
T ss_pred ceeEEEEecCCcccccc
Confidence 46899999999999853
No 299
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=37.88 E-value=2.7e+02 Score=29.79 Aligned_cols=32 Identities=16% Similarity=0.314 Sum_probs=25.1
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCC
Q 004314 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFP 236 (761)
Q Consensus 202 DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP 236 (761)
|++.--.....++..+|++++...+++ ||--|
T Consensus 72 dl~I~aGrrta~l~~~lkk~~~~~~vV---qI~~P 103 (329)
T COG3660 72 DLIITAGRRTAPLAFYLKKKFGGIKVV---QIQDP 103 (329)
T ss_pred ceEEecccchhHHHHHHHHhcCCceEE---EeeCC
Confidence 788888899999999999998875554 45445
No 300
>COG4996 Predicted phosphatase [General function prediction only]
Probab=37.26 E-value=60 Score=30.73 Aligned_cols=55 Identities=24% Similarity=0.103 Sum_probs=35.4
Q ss_pred eeEEecCCCcCCCCCCC--CCC-------------------CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 592 RAILFDYDGTVMPQTSI--NKA-------------------PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~~--~~~-------------------p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
++|++|.||||.....+ -+. .-+.+++.|+.+.+ .|..+-.+|=+-.+..-+-+.
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warn-sG~i~~~~sWN~~~kA~~aLr 76 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARN-SGYILGLASWNFEDKAIKALR 76 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHh-CCcEEEEeecCchHHHHHHHH
Confidence 58999999999874311 111 12567777777664 577777777766665555444
No 301
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=36.13 E-value=3.5e+02 Score=30.59 Aligned_cols=99 Identities=15% Similarity=0.118 Sum_probs=62.9
Q ss_pred EcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc--------
Q 004314 417 IDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-------- 488 (761)
Q Consensus 417 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-------- 488 (761)
....+|+.+ ++..||++|-. -|+|. ..|++..|. |+|+ +..+.++-
T Consensus 288 v~~~~p~~~---~l~~ad~vI~h---GG~gt-t~eaL~~gv-----------------P~vv--~P~~~DQ~~nA~rve~ 341 (406)
T COG1819 288 VADYVPQLE---LLPRADAVIHH---GGAGT-TSEALYAGV-----------------PLVV--IPDGADQPLNAERVEE 341 (406)
T ss_pred EecCCCHHH---HhhhcCEEEec---CCcch-HHHHHHcCC-----------------CEEE--ecCCcchhHHHHHHHH
Confidence 345667665 78899998864 57774 568888876 4443 22233331
Q ss_pred -cCc--EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHH
Q 004314 489 -SGA--IRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQD 543 (761)
Q Consensus 489 -~~a--l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~ 543 (761)
.-| +...+++.+.++++++++|+++ .-+++.+++++-..+++...=+...+.+
T Consensus 342 ~G~G~~l~~~~l~~~~l~~av~~vL~~~--~~~~~~~~~~~~~~~~~g~~~~a~~le~ 397 (406)
T COG1819 342 LGAGIALPFEELTEERLRAAVNEVLADD--SYRRAAERLAEEFKEEDGPAKAADLLEE 397 (406)
T ss_pred cCCceecCcccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 113 4455899999999999999964 3445555666667666654433333333
No 302
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=36.01 E-value=14 Score=35.28 Aligned_cols=11 Identities=55% Similarity=1.059 Sum_probs=0.0
Q ss_pred EEecCCCcCCC
Q 004314 594 ILFDYDGTVMP 604 (761)
Q Consensus 594 I~lDyDGTL~~ 604 (761)
|+||+||||++
T Consensus 1 iifD~dgtL~d 11 (176)
T PF13419_consen 1 IIFDLDGTLVD 11 (176)
T ss_dssp EEEESBTTTEE
T ss_pred cEEECCCCcEe
No 303
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=35.47 E-value=42 Score=33.94 Aligned_cols=34 Identities=15% Similarity=0.270 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
++.+.++...|.+ .+.+|+++||-=+..+...-+
T Consensus 90 T~Gi~eLv~~L~~-~~~~v~liSGGF~~~i~~Va~ 123 (227)
T KOG1615|consen 90 TPGIRELVSRLHA-RGTQVYLISGGFRQLIEPVAE 123 (227)
T ss_pred CCCHHHHHHHHHH-cCCeEEEEcCChHHHHHHHHH
Confidence 5677788888886 589999999977665554443
No 304
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=33.26 E-value=2.5e+02 Score=34.42 Aligned_cols=130 Identities=16% Similarity=0.148 Sum_probs=83.9
Q ss_pred CCeEEEeecCccccCChHHHHHHHHHHHHhCC-CCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004314 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHP-KWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (761)
Q Consensus 335 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P-~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~p 413 (761)
+..+++.+-|+..-|-..+.+.=.+++...-- ++..++.++..|-...++. .-.++-+.+...++.+|.+ -.
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~-~aK~iIk~I~~~a~~in~~------lk 558 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADY-AAKEIIKLINDVADVINNK------LK 558 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcch-HHHHHHHHHHHHHHhhccc------ce
Confidence 46678889999999987777766666655433 5556676665444333332 2245667788888888863 25
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL 488 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (761)
|+|+. ..+-.--..++.+|||-..+|+ .++| |||+++-+. .-.|.+-+|..-|+--+.
T Consensus 559 VvFl~-nYdvslA~~iipa~Dvweqis~------a~~E--ASGTsnMK~--------alNGaltigtlDGanvEi 616 (750)
T COG0058 559 VVFLP-NYDVSLAELLIPAADVWEQIPT------AGKE--ASGTSNMKA--------ALNGALTLGTLDGANVEI 616 (750)
T ss_pred EEEeC-CCChhHHHhhcccccccccCCC------CCcc--ccCcCcchH--------HhcCCceeeccccHHHHH
Confidence 88885 4455555668899999888876 4666 466544322 124567777777765554
No 305
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=33.26 E-value=6.8e+02 Score=27.41 Aligned_cols=233 Identities=15% Similarity=0.153 Sum_probs=97.4
Q ss_pred EEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCc----chHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhc
Q 004314 204 VWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLP----VREEILKALLNADLIGFHTFDYARHFLSCCSRML 279 (761)
Q Consensus 204 VwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp----~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~l 279 (761)
+||.|.++..+-.+. ..++.++.+.||-- |--.+....+ .+....+....+|.+-..+....+.|.+ ..
T Consensus 81 ~~i~~~~~~~~~~~~--~~~~~~~i~lwHG~-~~K~~g~~~~~~~~~~~~~~~~~~~~d~~~~~s~~~~~~~~~----~f 153 (369)
T PF04464_consen 81 YIISDSYFPDLIYFK--KRKNQKYIQLWHGI-PLKKIGYDSPDNKNYRKNYKRNYRNYDYFIVSSEFEKEIFKK----AF 153 (369)
T ss_dssp EEEESS---T--TS-----TTSEEEE--SS---SB--GGG-S---TS-HHHHHHHTT-SEEEESSHHHHHHHHH----HT
T ss_pred EEEECCCCCcccccc--cCCCcEEEEecCCC-cccccchhccccccchhhhhhhccCCcEEEECCHHHHHHHHH----Hh
Confidence 677774433321111 12578899999965 5333322211 1235566677889887776655544432 22
Q ss_pred CceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccC------C
Q 004314 280 GLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFK------G 350 (761)
Q Consensus 280 g~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~K------G 350 (761)
+... . +++..|. .++......... ..+++++.+ .++++||+.=.+.... .
T Consensus 154 ~~~~-------------~----~i~~~G~--PR~D~l~~~~~~--~~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~~~ 212 (369)
T PF04464_consen 154 GYPE-------------D----KILVTGY--PRNDYLFNKSKE--NRNRIKKKLGIDKDKKVILYAPTWRDNSSNEYFKF 212 (369)
T ss_dssp T--G-------------G----GEEES----GGGHHHHHSTT---HHHHHHHHTT--SS-EEEEEE----GGG--GGSS-
T ss_pred ccCc-------------c----eEEEeCC--CeEhHHhccCHH--HHHHHHHHhccCCCCcEEEEeeccccccccccccc
Confidence 3211 0 1223343 244333222111 145666666 5788999984332211 1
Q ss_pred hHHHHHHHHHHH-HhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHH
Q 004314 351 VDLKLLAMEHLL-KQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAY 429 (761)
Q Consensus 351 i~~~l~A~~~ll-~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~al 429 (761)
....+ -+++|. ...++ .+|+.-. -|. .+...... . .....|+.+.. ..++..+
T Consensus 213 ~~~~~-~~~~l~~~~~~~----~~li~k~------Hp~---~~~~~~~~---~------~~~~~i~~~~~---~~~~~~l 266 (369)
T PF04464_consen 213 FFSDL-DFEKLNFLLKNN----YVLIIKP------HPN---MKKKFKDF---K------EDNSNIIFVSD---NEDIYDL 266 (369)
T ss_dssp ---TT--HHHHHHHHTTT----EEEEE--------SHH---HHTT-------T------T-TTTEEE-TT----S-HHHH
T ss_pred ccccc-CHHHHHHHhCCC----cEEEEEe------Cch---hhhchhhh---h------ccCCcEEECCC---CCCHHHH
Confidence 12111 223331 22333 3354322 111 11111111 0 01124666653 3489999
Q ss_pred HHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEc--CC------CCCccccc---CcEEECCCC
Q 004314 430 YTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS--EF------IGCSPSLS---GAIRVNPWN 498 (761)
Q Consensus 430 y~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~S--e~------~G~~~~l~---~al~VnP~d 498 (761)
+..||++|- - +.=+..||+.++. |+|.- +. .|...... .|-.+ .+
T Consensus 267 l~~aDiLIT-D----ySSi~fD~~~l~K-----------------Piify~~D~~~Y~~~rg~~~~~~~~~pg~~~--~~ 322 (369)
T PF04464_consen 267 LAAADILIT-D----YSSIIFDFLLLNK-----------------PIIFYQPDLEEYEKERGFYFDYEEDLPGPIV--YN 322 (369)
T ss_dssp HHT-SEEEE-S----S-THHHHHGGGT-------------------EEEE-TTTTTTTTTSSBSS-TTTSSSS-EE--SS
T ss_pred HHhcCEEEE-e----chhHHHHHHHhCC-----------------CEEEEeccHHHHhhccCCCCchHhhCCCcee--CC
Confidence 999999773 1 1237899999864 55532 21 23222221 13344 47
Q ss_pred HHHHHHHHHHHHcCCH
Q 004314 499 IEATAEAMHEAIQMNE 514 (761)
Q Consensus 499 ~~~~A~ai~~aL~m~~ 514 (761)
.+++.++|..++..+.
T Consensus 323 ~~eL~~~i~~~~~~~~ 338 (369)
T PF04464_consen 323 FEELIEAIENIIENPD 338 (369)
T ss_dssp HHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHhhhhCCH
Confidence 8999999999887554
No 306
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=33.06 E-value=45 Score=39.49 Aligned_cols=61 Identities=11% Similarity=0.133 Sum_probs=48.7
Q ss_pred hccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 588 RSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 588 ~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
+...+.+.++.||+++..-.....+.+++.+.|++|.+ .+..++++||......+.....+
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~-~Gi~v~ilSgd~~~~a~~ia~~l 442 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKR-RGIEPVMLTGDNRKTAKAVAKEL 442 (562)
T ss_pred hCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHc
Confidence 34567889999999876432344577899999999986 58899999999999888888653
No 307
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=32.65 E-value=68 Score=33.89 Aligned_cols=67 Identities=19% Similarity=0.280 Sum_probs=44.0
Q ss_pred HHHHHHHHHhc-cceeEEecCCCcCCCCC-CC--------------------C--------------------CCCCHHH
Q 004314 579 IDAIVSAYLRS-KSRAILFDYDGTVMPQT-SI--------------------N--------------------KAPSQAV 616 (761)
Q Consensus 579 ~~~i~~~y~~s-~~rlI~lDyDGTL~~~~-~~--------------------~--------------------~~p~~~~ 616 (761)
+++|.+..+.. ..-|+++|+|-||+... +. . ....+++
T Consensus 7 ~~eV~~~~~~~~~~tLvvfDiDdTLi~~~~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~ 86 (252)
T PF11019_consen 7 FHEVQDYLENADQDTLVVFDIDDTLITPKQPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDV 86 (252)
T ss_pred HHHHHHHHHcCCCCeEEEEEcchhhhcCccccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhH
Confidence 45554444444 67799999999998532 10 0 0123566
Q ss_pred HHHHHHHHhcCCCeEEEEcCCChhhHHhhc
Q 004314 617 ISIINTLCNDARNTVFVVSGRGRDCLGKWF 646 (761)
Q Consensus 617 ~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f 646 (761)
.++++.|.. .+..|+.+|.|+.......+
T Consensus 87 ~~~i~~lq~-~~~~v~alT~~~~~~~~~t~ 115 (252)
T PF11019_consen 87 PNIINSLQN-KGIPVIALTARGPNMEDWTL 115 (252)
T ss_pred HHHHHHHHH-CCCcEEEEcCCChhhHHHHH
Confidence 688888885 68999999999965443333
No 308
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=31.39 E-value=80 Score=38.30 Aligned_cols=69 Identities=10% Similarity=0.095 Sum_probs=53.7
Q ss_pred HHHHHHHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 580 DAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 580 ~~i~~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
++..+.+.+...+.+++-+|++++..-...-.+.+++.+.+++|.+ .|..++++||-...........+
T Consensus 415 ~~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~-~Gi~v~miTGD~~~ta~~iA~~l 483 (675)
T TIGR01497 415 DQAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRK-MGIKTIMITGDNRLTAAAIAAEA 483 (675)
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHc
Confidence 4445566666778888888998875433344577899999999986 59999999999999998888754
No 309
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=30.34 E-value=6.3e+02 Score=26.15 Aligned_cols=159 Identities=19% Similarity=0.311 Sum_probs=83.5
Q ss_pred CCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccch
Q 004314 235 FPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIE 314 (761)
Q Consensus 235 fP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~ 314 (761)
||..++||... +..|++.|-.-|-|-|.|+.-+-|=|. + .|.+ +.+ + -.+.++| |+..+.+.
T Consensus 33 fpDydvfrAfT-S~kIIkkLK~rdgi~~dTP~~aL~klk---~-~gy~-----evi-i------Q~lhiIp-G~EyEklv 94 (265)
T COG4822 33 FPDYDVFRAFT-SRKIIKKLKERDGIDFDTPIQALNKLK---D-QGYE-----EVI-I------QPLHIIP-GIEYEKLV 94 (265)
T ss_pred CccHHHHHHHh-HHHHHHHHHhhcCcccCCHHHHHHHHH---H-ccch-----hee-e------eeeeecC-chHHHHHH
Confidence 78889998764 557888888899999999977755443 1 1211 100 1 1345555 77766553
Q ss_pred hhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHH
Q 004314 315 SVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAE 394 (761)
Q Consensus 315 ~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~e 394 (761)
. .++.++..|. .+.+|.-=|.+.-.... +++.+..+.|-++.+=.+|..|-.+ .-+....+ .-
T Consensus 95 r---------~V~~~~~dF~--~lkig~PlLy~k~DYe~---~v~aik~~~ppl~k~e~~vlmgHGt--~h~s~~~Y-ac 157 (265)
T COG4822 95 R---------EVNKYSNDFK--RLKIGRPLLYYKNDYEI---CVEAIKDQIPPLNKDEILVLMGHGT--DHHSNAAY-AC 157 (265)
T ss_pred H---------HHHHHhhhhh--eeecCCceeechhhHHH---HHHHHHHhcCCcCcCeEEEEEecCC--CccHHHHH-HH
Confidence 2 2445555552 23333332333333333 4455566788776665566666433 12222221 22
Q ss_pred HHHHHHHHhcccCCCCCccEEE--EcCCCCHHHHHHHHHhccc
Q 004314 395 IHATCKRINETFGRPGYEPVVF--IDKPVTLSERAAYYTIAEC 435 (761)
Q Consensus 395 v~~lv~~in~~~g~~~~~pV~~--~~~~v~~~el~aly~~ADv 435 (761)
+...... . +|.||.. ..+.-..+.+..+++..-+
T Consensus 158 Ld~~~~~--~-----~f~~v~v~~ve~yP~~d~vi~~l~~~~~ 193 (265)
T COG4822 158 LDHVLDE--Y-----GFDNVFVAAVEGYPLVDTVIEYLRKNGI 193 (265)
T ss_pred HHHHHHh--c-----CCCceEEEEecCCCcHHHHHHHHHHcCC
Confidence 3333221 1 3445543 2344445677777766554
No 310
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=28.89 E-value=28 Score=34.63 Aligned_cols=12 Identities=50% Similarity=0.681 Sum_probs=0.0
Q ss_pred eeEEecCCCcCC
Q 004314 592 RAILFDYDGTVM 603 (761)
Q Consensus 592 rlI~lDyDGTL~ 603 (761)
++|+||.||||+
T Consensus 2 ~~i~fDktGTLt 13 (215)
T PF00702_consen 2 DAICFDKTGTLT 13 (215)
T ss_dssp SEEEEECCTTTB
T ss_pred eEEEEecCCCcc
No 311
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=28.71 E-value=3.3e+02 Score=30.03 Aligned_cols=69 Identities=13% Similarity=0.207 Sum_probs=44.8
Q ss_pred HHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCC-C--cccc--------cC-c
Q 004314 424 SERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG-C--SPSL--------SG-A 491 (761)
Q Consensus 424 ~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G-~--~~~l--------~~-a 491 (761)
+++..+|+.||++|.-+ =+.+..|.++++. |.|+--+.. + .++. .| +
T Consensus 244 ~~m~~~~~~adlvIsr~----G~~t~~E~~~~g~-----------------P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~ 302 (352)
T PRK12446 244 GELPDILAITDFVISRA----GSNAIFEFLTLQK-----------------PMLLIPLSKFASRGDQILNAESFERQGYA 302 (352)
T ss_pred hhHHHHHHhCCEEEECC----ChhHHHHHHHcCC-----------------CEEEEcCCCCCCCchHHHHHHHHHHCCCE
Confidence 57899999999887643 2468899999986 334333321 1 1222 13 4
Q ss_pred EEECC--CCHHHHHHHHHHHHcCC
Q 004314 492 IRVNP--WNIEATAEAMHEAIQMN 513 (761)
Q Consensus 492 l~VnP--~d~~~~A~ai~~aL~m~ 513 (761)
..+.. .+++.+++++..+++++
T Consensus 303 ~~l~~~~~~~~~l~~~l~~ll~~~ 326 (352)
T PRK12446 303 SVLYEEDVTVNSLIKHVEELSHNN 326 (352)
T ss_pred EEcchhcCCHHHHHHHHHHHHcCH
Confidence 44433 35789999999998764
No 312
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=28.12 E-value=49 Score=34.61 Aligned_cols=59 Identities=17% Similarity=0.360 Sum_probs=42.7
Q ss_pred hccceeEEecCCCcCCCCCCC-----------------------CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhh-HH
Q 004314 588 RSKSRAILFDYDGTVMPQTSI-----------------------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDC-LG 643 (761)
Q Consensus 588 ~s~~rlI~lDyDGTL~~~~~~-----------------------~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~-L~ 643 (761)
+-+.++|++|+|-|+++..+. ...+-+..++.|+=.-+ .|..|+-+|-|..+. ..
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~-~Gg~ifyiSNR~~~~~~~ 154 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNS-NGGKIFYISNRDQENEKD 154 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHh-cCcEEEEEeccchhcccc
Confidence 446679999999999975431 12345677788877665 588999999999886 44
Q ss_pred hhcc
Q 004314 644 KWFS 647 (761)
Q Consensus 644 ~~f~ 647 (761)
-...
T Consensus 155 ~T~~ 158 (274)
T COG2503 155 GTIE 158 (274)
T ss_pred hhHH
Confidence 4443
No 313
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=27.91 E-value=93 Score=33.68 Aligned_cols=67 Identities=21% Similarity=0.195 Sum_probs=44.5
Q ss_pred HHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccc------cc--C-cEEE
Q 004314 424 SERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS------LS--G-AIRV 494 (761)
Q Consensus 424 ~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~------l~--~-al~V 494 (761)
+++.++|..||++|..+ |++ +..|++++|. |+|+..+.|-.++ +. | |+.+
T Consensus 239 ~~~~~~l~~ad~vI~~~---G~~-t~~Ea~~~g~-----------------P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 239 DNFKELIKNAELVITHG---GFS-LISEALSLGK-----------------PLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred HHHHHHHHhCCEEEECC---ChH-HHHHHHHcCC-----------------CEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 78999999999999876 555 5889999986 5665555553343 21 3 6666
Q ss_pred CCCCHHHHHHHHHHHHcC
Q 004314 495 NPWNIEATAEAMHEAIQM 512 (761)
Q Consensus 495 nP~d~~~~A~ai~~aL~m 512 (761)
+..+. ++.+++...+++
T Consensus 298 ~~~~~-~~~~~~~~~~~~ 314 (321)
T TIGR00661 298 EYKEL-RLLEAILDIRNM 314 (321)
T ss_pred ChhhH-HHHHHHHhcccc
Confidence 66666 444444444444
No 314
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=27.40 E-value=1.1e+02 Score=32.54 Aligned_cols=51 Identities=18% Similarity=0.261 Sum_probs=35.5
Q ss_pred ceeEEecCCCcCCCCCCC-----------------------CCCCCHHHHHHHHHHHh-----cCCCeEEEEcCCChhh
Q 004314 591 SRAILFDYDGTVMPQTSI-----------------------NKAPSQAVISIINTLCN-----DARNTVFVVSGRGRDC 641 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~-----------------------~~~p~~~~~~~L~~L~~-----d~~n~V~IvSGR~~~~ 641 (761)
.-=|++|-||+|..+.+. ..-|-..++..|.+|.+ ++..+++|||-|+-..
T Consensus 121 qlRIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apa 199 (264)
T PF06189_consen 121 QLRIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPA 199 (264)
T ss_pred ceEEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCch
Confidence 445899999999986532 12255677777777765 2356789999998653
No 315
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=27.04 E-value=82 Score=38.69 Aligned_cols=66 Identities=8% Similarity=0.046 Sum_probs=52.1
Q ss_pred HHHHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 583 VSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 583 ~~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
.+.+.....+.+++=+||+++..-...-.+.++..+.|++|.+ .+..++++||......+...+.+
T Consensus 540 ~~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~-~gi~~~llTGd~~~~a~~ia~~l 605 (741)
T PRK11033 540 INELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELKA-LGIKGVMLTGDNPRAAAAIAGEL 605 (741)
T ss_pred HHHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHc
Confidence 3456666778888889998875332344567899999999996 58999999999999999888754
No 316
>PF14639 YqgF: Holliday-junction resolvase-like of SPT6 ; PDB: 3PSI_A 3PSF_A.
Probab=26.23 E-value=42 Score=32.57 Aligned_cols=69 Identities=17% Similarity=0.273 Sum_probs=34.8
Q ss_pred ccceeeeecCcccccCCHHHHHHHHHhccceeEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHHhcCCCeEEEEcC
Q 004314 562 SFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTS-----INKAPSQAVISIINTLCNDARNTVFVVSG 636 (761)
Q Consensus 562 g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~n~V~IvSG 636 (761)
|...||++++..- .. .+......++|-+|.++.... .+....++..+.|.++....+-.|++++|
T Consensus 2 g~~~rVla~~~g~---------g~-~~~~~~~v~ld~~G~v~d~~~~~~~~~~~~~~~~~~~~l~~~i~~~kP~vI~v~g 71 (150)
T PF14639_consen 2 GTGPRVLALSWGS---------GD-GDDAVFCVVLDENGEVLDHLKLVYNERDRERKEEDMERLKKFIEKHKPDVIAVGG 71 (150)
T ss_dssp -----EEEEE-TT------------TTS-EEEEEE-TTS-EEEEEEE-S-TT-SS-SHHHHHHHHHHHHHH--SEEEE--
T ss_pred CCCCEEEEEEcCC---------CC-CCCCEEEEEECCCCcEEEEEEEcCCccchHHHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 4557787776421 00 133456889999999876421 23334567778787887766777888888
Q ss_pred CChh
Q 004314 637 RGRD 640 (761)
Q Consensus 637 R~~~ 640 (761)
-+.+
T Consensus 72 ~~~~ 75 (150)
T PF14639_consen 72 NSRE 75 (150)
T ss_dssp SSTH
T ss_pred CChh
Confidence 7755
No 317
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=26.10 E-value=51 Score=42.21 Aligned_cols=15 Identities=40% Similarity=0.696 Sum_probs=13.4
Q ss_pred ceeEEecCCCcCCCC
Q 004314 591 SRAILFDYDGTVMPQ 605 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~ 605 (761)
.++++||+||||++.
T Consensus 75 ikaVIFDlDGTLiDS 89 (1057)
T PLN02919 75 VSAVLFDMDGVLCNS 89 (1057)
T ss_pred CCEEEECCCCCeEeC
Confidence 678999999999984
No 318
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=26.08 E-value=3.5e+02 Score=30.17 Aligned_cols=157 Identities=17% Similarity=0.162 Sum_probs=103.8
Q ss_pred CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhc-ccCCCCCcc
Q 004314 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINE-TFGRPGYEP 413 (761)
Q Consensus 335 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~-~~g~~~~~p 413 (761)
+++|-++=--++-.|.-..=+.+.|+.-+..|+.. ..+.|+|... .++-. +....+.+++. +.|.
T Consensus 189 ~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v---~~~~V~Nt~~--~ke~~----~F~~f~~~ldlvr~gk----- 254 (364)
T PF10933_consen 189 GKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAV---EHVYVTNTYH--LKEHP----TFVNFANSLDLVRDGK----- 254 (364)
T ss_pred CceEEEecCCceEEeecCccHHHHHHHHHhChhhc---ceEEEecchh--hhcCH----HHHHHHHhhHHhhcCe-----
Confidence 45666666667777777777788899999999864 4566776432 22322 23344444443 2232
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-CcE
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAI 492 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al 492 (761)
--+.+..+..+..+=| +|++|.--.--|+|-.-+|++-.|- |||- -|+.|. -|+
T Consensus 255 -asfegR~~~p~fla~~--tD~VvSHqWeN~lNYlY~daLyggY-----------------PLVH-----NS~~l~d~GY 309 (364)
T PF10933_consen 255 -ASFEGRFDFPDFLAQH--TDAVVSHQWENPLNYLYYDALYGGY-----------------PLVH-----NSPLLKDVGY 309 (364)
T ss_pred -eEEeeecChHHHHHhC--CCEEEeccccchhhHHHHHHHhcCC-----------------Cccc-----CcchhcccCc
Confidence 2245556666666555 6998888888999999999998765 7774 244554 378
Q ss_pred EECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhh
Q 004314 493 RVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST 530 (761)
Q Consensus 493 ~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 530 (761)
.-+-.|..+=|++|.+|+..-+.....-.++.++++.+
T Consensus 310 YY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~ 347 (364)
T PF10933_consen 310 YYPDFDAFEGARQLLRAIREHDADLDAYRARARRLLDR 347 (364)
T ss_pred CCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh
Confidence 88889999999999999987665544444445555443
No 319
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=26.07 E-value=1.6e+02 Score=30.65 Aligned_cols=61 Identities=18% Similarity=0.221 Sum_probs=0.0
Q ss_pred cCCHHHHHHHHHhcc-ceeEEecC--CCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcC--CChhhHHhhcc
Q 004314 576 KLSIDAIVSAYLRSK-SRAILFDY--DGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSG--RGRDCLGKWFS 647 (761)
Q Consensus 576 ~l~~~~i~~~y~~s~-~rlI~lDy--DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSG--R~~~~L~~~f~ 647 (761)
..+..++++.+.... ..+|++|+ |||+.. |.-++++.+.+... .-++++| |+.+.+.+.+.
T Consensus 147 ~~~~~~~~~~~~~~g~~~ii~tdi~~dGt~~G-------~~~~li~~l~~~~~----ipvi~~GGi~s~edi~~l~~ 212 (234)
T PRK13587 147 ELNLFSFVRQLSDIPLGGIIYTDIAKDGKMSG-------PNFELTGQLVKATT----IPVIASGGIRHQQDIQRLAS 212 (234)
T ss_pred CCCHHHHHHHHHHcCCCEEEEecccCcCCCCc-------cCHHHHHHHHHhCC----CCEEEeCCCCCHHHHHHHHH
No 320
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=25.63 E-value=6.3e+02 Score=31.30 Aligned_cols=136 Identities=15% Similarity=0.061 Sum_probs=79.6
Q ss_pred CCCeEEEeecCccccCChHH-HHHHHHHHH--HhCCCCc-CceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 004314 334 EGKTVLLGVDDMDIFKGVDL-KLLAMEHLL--KQHPKWQ-GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP 409 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~ 409 (761)
++...++.+-|+..-|-..+ .|..++++. ..+|+.. ..+++|..|-...++. .-.++-+.+.++++.||.-=...
T Consensus 525 p~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~~iN~Dp~v~ 603 (794)
T TIGR02093 525 PNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYH-MAKLIIKLINSVAEVVNNDPAVG 603 (794)
T ss_pred ccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcH-HHHHHHHHHHHHHHHhccChhhC
Confidence 34556778999998888777 666655543 3456541 2456665554443332 23455567788888887531112
Q ss_pred CCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccc
Q 004314 410 GYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS 487 (761)
Q Consensus 410 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 487 (761)
+.-.|+|+. ...-.--..++.+|||-.-+|+ .++| |||+++-+. .-.|.+-+|..-|+-.+
T Consensus 604 ~~lkVVFle-nY~VslAe~iipaaDvseqist------ag~E--ASGTsnMK~--------alNGaltlgtlDGanvE 664 (794)
T TIGR02093 604 DKLKVVFVP-NYNVSLAELIIPAADLSEQIST------AGKE--ASGTGNMKF--------MLNGALTIGTLDGANVE 664 (794)
T ss_pred CceeEEEeC-CCChHHHHHhhhhhhhhhhCCC------CCcc--ccCcchhHH--------HhcCcceeecccchhHH
Confidence 223588885 4556666778999999887775 4555 344433221 11345666665554433
No 321
>PRK14057 epimerase; Provisional
Probab=25.51 E-value=4.5e+02 Score=27.86 Aligned_cols=66 Identities=12% Similarity=0.190 Sum_probs=43.2
Q ss_pred eeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHh-cccceeccc
Q 004314 372 AVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI-AECVVVTAV 441 (761)
Q Consensus 372 vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~-ADv~vvtS~ 441 (761)
.+||+-.+|..+..+-.++..+.++++.+.+..+ ++.-.+-..|.++.+.+..+..+ ||++|.-|.
T Consensus 157 ~VLvMtV~PGfgGQ~Fi~~~l~KI~~lr~~~~~~----~~~~~IeVDGGI~~~ti~~l~~aGad~~V~GSa 223 (254)
T PRK14057 157 VIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDK----REGKIIVIDGSLTQDQLPSLIAQGIDRVVSGSA 223 (254)
T ss_pred EEEEEEECCCCCchhccHHHHHHHHHHHHHHHhc----CCCceEEEECCCCHHHHHHHHHCCCCEEEEChH
Confidence 4577777887665444445556666665555432 22234557899999988887764 899988653
No 322
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=25.49 E-value=5.4e+02 Score=31.87 Aligned_cols=135 Identities=16% Similarity=0.095 Sum_probs=80.1
Q ss_pred CCeEEEeecCccccCChHH-HHHHHHHHH--HhCCCCc-CceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 004314 335 GKTVLLGVDDMDIFKGVDL-KLLAMEHLL--KQHPKWQ-GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPG 410 (761)
Q Consensus 335 ~~~vil~VdRld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~ 410 (761)
+...++.+-|+..-|-..+ .|..++++. ..+|+.. ..+++|..|-...++. .-..+-+.+..+++.||..=...+
T Consensus 528 ~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~~in~Dp~v~~ 606 (798)
T PRK14985 528 QAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY-LAKNIIFAINKVAEVINNDPLVGD 606 (798)
T ss_pred hhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH-HHHHHHHHHHHHHHHhcCChhhCC
Confidence 4456777999998888777 666655543 3466632 2456665554443332 223455677888888874311112
Q ss_pred CccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccc
Q 004314 411 YEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS 487 (761)
Q Consensus 411 ~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 487 (761)
.-.|+|+. ...-.--..++.+|||-.-+|+ .++| |||+++-+. .-.|.|-+|..-|+--+
T Consensus 607 ~lkVVFle-nY~VslAe~lipaaDvseqis~------ag~E--ASGTsnMK~--------amNGaLtlgtlDGanvE 666 (798)
T PRK14985 607 KLKVVFLP-DYCVSAAELLIPAADISEQIST------AGKE--ASGTGNMKL--------ALNGALTVGTLDGANVE 666 (798)
T ss_pred ceeEEEeC-CCChHHHHHHhhhhhhhhhCCC------CCcc--ccCcchhHH--------HhcCceeeecccchHHH
Confidence 23588885 4566666778999999887775 4555 354433221 12456777766665433
No 323
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=24.25 E-value=1e+02 Score=31.71 Aligned_cols=45 Identities=16% Similarity=0.287 Sum_probs=30.1
Q ss_pred EecCCCcCCCCCCCC-----------CCCCHHHHHHHHHHHhcCCCeEEEEcCCCh
Q 004314 595 LFDYDGTVMPQTSIN-----------KAPSQAVISIINTLCNDARNTVFVVSGRGR 639 (761)
Q Consensus 595 ~lDyDGTL~~~~~~~-----------~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~ 639 (761)
.+|++|++....+.. .....++.+.|+++.+|++...+|+.+.+.
T Consensus 2 ~i~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s~ 57 (222)
T cd07018 2 VLDLSGSLVEQPPPSPPLLLGGGESSELSLRDLLEALEKAAEDDRIKGIVLDLDGL 57 (222)
T ss_pred EEcCCCcccccCCCCChhhhccCCcCCccHHHHHHHHHHHhcCCCeEEEEEECCCC
Confidence 578888887654211 122367888888888888888777776553
No 324
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=24.14 E-value=6.7e+02 Score=27.37 Aligned_cols=88 Identities=22% Similarity=0.271 Sum_probs=49.3
Q ss_pred CCCeEEEeecCccccCChH-HHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004314 334 EGKTVLLGVDDMDIFKGVD-LKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~-~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~ 412 (761)
.++.+++..+--...|--+ ..+.++.+.|.+. .++ ++++|+|.- .+. +.++++++.++. .
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~-~~~----vvl~ggp~e---~e~----~~~~~i~~~~~~-------~ 242 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQAR-GYE----VVLTSGPDK---DDL----ACVNEIAQGCQT-------P 242 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHC-CCe----EEEEcCCCh---HHH----HHHHHHHHhcCC-------C
Confidence 3456777777655677754 2444444444432 332 455665431 111 122333332221 1
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecc
Q 004314 413 PVVFIDKPVTLSERAAYYTIAECVVVTA 440 (761)
Q Consensus 413 pV~~~~~~v~~~el~aly~~ADv~vvtS 440 (761)
+++-+.+..+..|+.++++.||++|-+-
T Consensus 243 ~~~~l~g~~sL~el~ali~~a~l~v~nD 270 (352)
T PRK10422 243 PVTALAGKTTFPELGALIDHAQLFIGVD 270 (352)
T ss_pred ccccccCCCCHHHHHHHHHhCCEEEecC
Confidence 3444667889999999999999998764
No 325
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=24.02 E-value=1.2e+02 Score=38.66 Aligned_cols=39 Identities=18% Similarity=0.111 Sum_probs=33.7
Q ss_pred CCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 610 KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 610 ~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
-.|.+++.+++++|.+ .|..|+++|||...........+
T Consensus 567 Dplr~~v~~aI~~l~~-~Gi~v~~~TGd~~~ta~~ia~~~ 605 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRS-AGIKVIMVTGDHPITAKAIAKGV 605 (997)
T ss_pred CCChHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHc
Confidence 3567899999999986 69999999999999998887643
No 326
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=23.83 E-value=2.1e+02 Score=28.25 Aligned_cols=78 Identities=19% Similarity=0.229 Sum_probs=44.9
Q ss_pred CCEEEEeCCccchHHHHH--HHhcCCCeEEEEEecC---CCchhH-HhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHH
Q 004314 201 DDYVWIHDYHLMVLPTFL--RRRFTRLRMGFFLHSP---FPSSEI-YRTLPVREEILKALLNADLIGFHTFDYARHFLSC 274 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~l--r~~~~~~~ig~flH~P---fP~~e~-fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~ 274 (761)
.|+|..-|.= =|+.++ +.....+|....+|-- +|-++- -|.+-..--=+-+-|.||.|-|.+.-..+.|++.
T Consensus 60 ~dll~aTsml--dLa~l~gL~p~l~~~p~ilYFHENQl~YP~~~~~~rd~~~~~~ni~saLaAD~v~FNS~~nr~sFL~~ 137 (168)
T PF12038_consen 60 YDLLFATSML--DLATLRGLRPDLANVPKILYFHENQLAYPVSPGQERDFQYGMNNIYSALAADRVVFNSAFNRDSFLDG 137 (168)
T ss_pred CCEEEeeccc--cHHHHHhhccCCCCCCEEEEEecCcccCCCCCCccccccHHHHHHHHHHhceeeeecchhhHHHHHHH
Confidence 4888888752 233322 2223345555455521 343321 0000011112345689999999999999999999
Q ss_pred HhhhcC
Q 004314 275 CSRMLG 280 (761)
Q Consensus 275 ~~r~lg 280 (761)
+..++.
T Consensus 138 ~~~fL~ 143 (168)
T PF12038_consen 138 IPSFLK 143 (168)
T ss_pred HHHHHH
Confidence 998885
No 327
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=23.70 E-value=78 Score=30.05 Aligned_cols=70 Identities=16% Similarity=0.306 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhccc-CCCCCccEEEEcCCCCHHHHHHHHH
Q 004314 353 LKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETF-GRPGYEPVVFIDKPVTLSERAAYYT 431 (761)
Q Consensus 353 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~-g~~~~~pV~~~~~~v~~~el~aly~ 431 (761)
..+..+.++.+++ ++..+.||.|...+|.+ .+....+.+.++++..+| +- ||.++++..+..+-...+.
T Consensus 38 ~~~~~l~~li~~~-----~i~~iVvGlP~~~~G~~-~~~~~~v~~f~~~L~~~~~~i----pV~~~DEr~TT~~A~~~l~ 107 (135)
T PF03652_consen 38 KDIEELKKLIEEY-----QIDGIVVGLPLNMDGSE-SEQARRVRKFAEELKKRFPGI----PVILVDERLTTKEAERRLR 107 (135)
T ss_dssp CCHHHHHHHHHHC-----CECEEEEEEEBBCTSSC--CCHHHHHHHHHHHHHHH-TS----EEEEEECSCSHHCCHCCHH
T ss_pred hHHHHHHHHHHHh-----CCCEEEEeCCcccCCCc-cHHHHHHHHHHHHHHHhcCCC----cEEEECCChhHHHHHHHHH
Confidence 3445566667665 25577789997665544 233455666666666665 32 8999998888776555554
Q ss_pred h
Q 004314 432 I 432 (761)
Q Consensus 432 ~ 432 (761)
.
T Consensus 108 ~ 108 (135)
T PF03652_consen 108 E 108 (135)
T ss_dssp H
T ss_pred H
Confidence 3
No 328
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=22.62 E-value=75 Score=30.29 Aligned_cols=52 Identities=19% Similarity=0.263 Sum_probs=33.5
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCCh--hhHHhhc
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGR--DCLGKWF 646 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~--~~L~~~f 646 (761)
.-+=++|+||.++.-.+.......++++.+ .+ -|..|+|+|--.. +..++.-
T Consensus 43 tgiAildL~G~~l~l~S~R~~~~~evi~~I---~~-~G~PviVAtDV~p~P~~V~Kia 96 (138)
T PF04312_consen 43 TGIAILDLDGELLDLKSSRNMSRSEVIEWI---SE-YGKPVIVATDVSPPPETVKKIA 96 (138)
T ss_pred eEEEEEecCCcEEEEEeecCCCHHHHHHHH---HH-cCCEEEEEecCCCCcHHHHHHH
Confidence 445679999999986655544555555544 43 4789999996543 3444443
No 329
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=21.96 E-value=1.2e+02 Score=38.03 Aligned_cols=67 Identities=16% Similarity=0.208 Sum_probs=50.4
Q ss_pred HHHHHHhccceeEEecCCC-----cCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 582 IVSAYLRSKSRAILFDYDG-----TVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 582 i~~~y~~s~~rlI~lDyDG-----TL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
..+.|.+...|.+++=|++ |++..-...-.|.+++.+++++|.+ .+..|+++||-...........+
T Consensus 494 ~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~-~Gi~v~miTGD~~~tA~~ia~~~ 565 (884)
T TIGR01522 494 EAAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLIT-GGVRIIMITGDSQETAVSIARRL 565 (884)
T ss_pred HHHHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHc
Confidence 3445556667888888776 4544333344577899999999985 69999999999999998887643
No 330
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=21.79 E-value=5.3e+02 Score=30.93 Aligned_cols=87 Identities=17% Similarity=0.225 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHH
Q 004314 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (761)
Q Consensus 352 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~ 431 (761)
+..|+.+.++|++-|+-+ |+...-|.-++ ..+...+... |- .-..|+|.. -...+|=..-+.
T Consensus 773 P~~l~~W~~ILk~VPnS~----LwllrfPa~ge--------~rf~ty~~~~----Gl-~p~riifs~-va~k~eHvrr~~ 834 (966)
T KOG4626|consen 773 PSTLQMWANILKRVPNSV----LWLLRFPAVGE--------QRFRTYAEQL----GL-EPDRIIFSP-VAAKEEHVRRGQ 834 (966)
T ss_pred HHHHHHHHHHHHhCCcce----eEEEeccccch--------HHHHHHHHHh----CC-Cccceeecc-ccchHHHHHhhh
Confidence 567899999999999865 66667676433 2233333333 22 122466543 345678888899
Q ss_pred hcccceecccccCCCcchhhheeeec
Q 004314 432 IAECVVVTAVRDGMNLTPYEYIVCRQ 457 (761)
Q Consensus 432 ~ADv~vvtS~~EGmnLv~~Eama~~~ 457 (761)
.||||+-|++.-|-- +-.|-..+|.
T Consensus 835 LaDv~LDTplcnGhT-Tg~dvLw~Gv 859 (966)
T KOG4626|consen 835 LADVCLDTPLCNGHT-TGMDVLWAGV 859 (966)
T ss_pred hhhhcccCcCcCCcc-cchhhhccCC
Confidence 999999999977642 3344444443
No 331
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=21.21 E-value=1.6e+02 Score=35.73 Aligned_cols=68 Identities=10% Similarity=0.089 Sum_probs=52.6
Q ss_pred HHHHHHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 581 AIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 581 ~i~~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
...+.+.+...+.+++-+|++++..-...-.+.+++.+.+++|.+ .+.+++++||=.....+.....+
T Consensus 415 ~~~~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~-~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 415 AAVDEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRK-MGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHc
Confidence 344555666678888888999875332344577899999999986 69999999999999998888754
No 332
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=20.74 E-value=3.9e+02 Score=27.80 Aligned_cols=66 Identities=17% Similarity=0.193 Sum_probs=41.4
Q ss_pred eeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHh-cccceeccc
Q 004314 372 AVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI-AECVVVTAV 441 (761)
Q Consensus 372 vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~-ADv~vvtS~ 441 (761)
.+||+-.+|..+...-.+...+.++++-+.+..+ ++.-.+...|.+..+....+..+ ||++|.-|.
T Consensus 143 ~VLiMtV~PGfgGQ~f~~~~l~KI~~lr~~~~~~----~~~~~IeVDGGI~~~ti~~l~~aGaD~~V~GSa 209 (228)
T PRK08091 143 LIQILTLDPRTGTKAPSDLILDRVIQVENRLGNR----RVEKLISIDGSMTLELASYLKQHQIDWVVSGSA 209 (228)
T ss_pred EEEEEEECCCCCCccccHHHHHHHHHHHHHHHhc----CCCceEEEECCCCHHHHHHHHHCCCCEEEEChh
Confidence 4577777776654333344455566555544432 23334668899999888777764 899888653
No 333
>PRK10671 copA copper exporting ATPase; Provisional
Probab=20.14 E-value=1.5e+02 Score=37.01 Aligned_cols=66 Identities=12% Similarity=0.186 Sum_probs=48.8
Q ss_pred HHHHHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 582 IVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 582 i~~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
..+.+.....+.+++-+||+++..-.....+.+...+.|++|.+ .+..++++||......+.....
T Consensus 621 ~~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~-~gi~v~~~Tgd~~~~a~~ia~~ 686 (834)
T PRK10671 621 EITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHK-AGYRLVMLTGDNPTTANAIAKE 686 (834)
T ss_pred HHHHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHH
Confidence 34455556678888888998764222233456788899999985 5899999999999988877764
Done!