Your job contains 1 sequence.
>004319
MDTDIDDTCKAKDEEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGK
SGTKVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCIS
RSVKRIEHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLG
PLDTLPHGSFGQKNPDAKIQLGIMKFLKKVDAPSNTGSTASSTQDPVPPQITEEKNSCLE
GQEITSLLSDAAGEEVKGTENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVI
IEKVEEFVNKLGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGG
LCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPL
CGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKG
CNEDIRLEPSVSQDHSEDVHGNYISTGDKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAA
NLSADNEKIGVSTSKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPKAQKHIL
VLSRFDGLDRLADVRNEHLQILQTMHAVGMKWAEKFLHEDASLAFRLGYHSAPSMRQLHL
HVISQDFNSKHLKNKKHWNSFNTAFFCDSVDVLEEISNHGKATLKDYDSLLSMELRCHRC
RSAHPSIPRLKSHISSCRAPFPSSLLENGRLMLAPRNTAQP
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004319
(761 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2179122 - symbol:APTX "APRATAXIN-like" species... 799 2.0e-230 3
MGI|MGI:1913658 - symbol:Aptx "aprataxin" species:10090 "... 412 3.8e-39 2
UNIPROTKB|F1SE72 - symbol:APTX "Aprataxin" species:9823 "... 412 9.8e-38 1
RGD|628740 - symbol:Aptx "aprataxin" species:10116 "Rattu... 411 1.3e-37 1
UNIPROTKB|F1LMH1 - symbol:Aptx "Aprataxin" species:10116 ... 411 1.3e-37 1
UNIPROTKB|Q8K4H4 - symbol:Aptx "Aprataxin" species:10116 ... 411 1.3e-37 1
UNIPROTKB|P61797 - symbol:APTX "Aprataxin" species:9615 "... 410 1.6e-37 1
UNIPROTKB|F1PHH9 - symbol:APTX "Aprataxin" species:9615 "... 408 2.7e-37 1
UNIPROTKB|J9P6H4 - symbol:APTX "Aprataxin" species:9615 "... 408 2.7e-37 1
UNIPROTKB|Q7YRZ1 - symbol:APTX "Aprataxin" species:9823 "... 407 3.4e-37 1
UNIPROTKB|F1NFX5 - symbol:APTX "Aprataxin" species:9031 "... 402 1.2e-36 1
UNIPROTKB|F1P5K8 - symbol:APTX "Aprataxin" species:9031 "... 402 1.2e-36 1
UNIPROTKB|P61798 - symbol:APTX "Aprataxin" species:9031 "... 402 1.2e-36 1
UNIPROTKB|Q7Z2E3 - symbol:APTX "Aprataxin" species:9606 "... 397 4.2e-36 1
UNIPROTKB|F1MVI2 - symbol:APTX "Aprataxin" species:9913 "... 393 1.1e-35 1
UNIPROTKB|Q5EA08 - symbol:APTX "APTX protein" species:991... 393 1.1e-35 1
UNIPROTKB|Q7YRZ2 - symbol:APTX "Aprataxin" species:9913 "... 393 1.1e-35 1
ZFIN|ZDB-GENE-040628-2 - symbol:aptx "aprataxin" species:... 366 2.7e-34 2
DICTYBASE|DDB_G0272839 - symbol:DDB_G0272839 "histidine t... 253 4.4e-21 2
FB|FBgn0038704 - symbol:CG5316 species:7227 "Drosophila m... 276 1.4e-20 1
SGD|S000005784 - symbol:HNT3 "DNA 5' AMP hydrolase involv... 170 4.0e-18 2
POMBASE|SPCC18.09c - symbol:hnt3 "aprataxin Hnt3" species... 177 2.0e-12 1
CGD|CAL0000789 - symbol:orf19.2376 species:5476 "Candida ... 148 3.1e-12 2
CGD|CAL0001145 - symbol:orf19.4383 species:5476 "Candida ... 148 3.1e-12 2
UNIPROTKB|Q59UI8 - symbol:HNT32 "Potential histidine tria... 148 3.1e-12 2
UNIPROTKB|C9JZ40 - symbol:APTX "Aprataxin" species:9606 "... 169 1.5e-11 1
UNIPROTKB|F8W6G5 - symbol:APTX "Aprataxin" species:9606 "... 155 4.6e-10 1
UNIPROTKB|G4MZR7 - symbol:MGG_07058 "Uncharacterized prot... 129 2.8e-08 3
POMBASE|SPAC23C11.04c - symbol:pnk1 "DNA kinase/phosphata... 145 1.1e-06 1
MGI|MGI:1914097 - symbol:Hint3 "histidine triad nucleotid... 123 1.2e-06 1
UNIPROTKB|F1PKA3 - symbol:HINT3 "Uncharacterized protein"... 116 6.8e-06 1
GENEDB_PFALCIPARUM|PF08_0059 - symbol:PF08_0059 "protein ... 126 8.1e-06 1
DICTYBASE|DDB_G0292298 - symbol:DDB_G0292298 species:4468... 118 2.5e-05 1
WB|WBGene00009010 - symbol:F21D5.5 species:6239 "Caenorha... 128 8.3e-05 1
UNIPROTKB|E2R0U3 - symbol:PNKP "Uncharacterized protein" ... 121 0.00071 1
DICTYBASE|DDB_G0281229 - symbol:pnkp "putative bifunction... 121 0.00075 1
>TAIR|locus:2179122 [details] [associations]
symbol:APTX "APRATAXIN-like" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006790 "sulfur compound metabolic
process" evidence=IDA] [GO:0009150 "purine ribonucleotide metabolic
process" evidence=IDA] [GO:0047627 "adenylylsulfatase activity"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0006310 "DNA
recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR011146
InterPro:IPR011598 InterPro:IPR015880 Pfam:PF00010 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50888 PROSITE:PS51084 SMART:SM00353
SMART:SM00355 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 PROSITE:PS00892 InterPro:IPR019808 eggNOG:NOG278510
KO:K10863 PANTHER:PTHR12486 GO:GO:0006790 EMBL:AL161746
IPI:IPI00539681 PIR:T48153 RefSeq:NP_195751.1 UniGene:At.54671
ProteinModelPortal:Q9M041 SMR:Q9M041 PRIDE:Q9M041
EnsemblPlants:AT5G01310.1 GeneID:830940 KEGG:ath:AT5G01310
GeneFarm:3073 TAIR:At5g01310 HOGENOM:HOG000083464 InParanoid:Q9M041
OMA:GHEGNLQ PhylomeDB:Q9M041 ProtClustDB:CLSN2687115
BioCyc:ARA:AT5G01310-MONOMER Genevestigator:Q9M041 GO:GO:0047627
GO:GO:0009150 InterPro:IPR002589 Pfam:PF01661 PROSITE:PS51154
Uniprot:Q9M041
Length = 912
Score = 799 (286.3 bits), Expect = 2.0e-230, Sum P(3) = 2.0e-230
Identities = 164/253 (64%), Positives = 196/253 (77%)
Query: 259 TENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNKLGNARLVL 318
T N V+ V GS+ VPTLAFPS+ST+DFQF+ EKASD+I+EK EEF++KLG ARLVL
Sbjct: 439 TANVRVSPVKL-GSADIVPTLAFPSISTADFQFDLEKASDIIVEKAEEFLSKLGTARLVL 497
Query: 319 VDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGG 378
VDL++GSKILSLV+AKA+QK+I+ KFFTFVGDIT+L + GGL CNVIANA NWRLKPGG
Sbjct: 498 VDLSRGSKILSLVKAKASQKNIDSAKFFTFVGDITKLRSEGGLHCNVIANATNWRLKPGG 557
Query: 379 GGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMN 438
GGVNAAIF AAGP LE AT RA +L PG +V+VPLPST PL EG+THVIHVLGPNMN
Sbjct: 558 GGVNAAIFKAAGPDLETATRVRANTLLPGKAVVVPLPSTCPLHNAEGITHVIHVLGPNMN 617
Query: 439 PRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNEDIRLEPSVSQDHSED 498
P RP+ L+ DY KGC+ LR+AYTSLFEGFLS+V+ Q KL K ++ + S +D ED
Sbjct: 618 PNRPDNLNNDYTKGCKTLREAYTSLFEGFLSVVQDQSKLPKRSSQTA-VSDS-GEDIKED 675
Query: 499 VHGN--YISTGDK 509
N Y + DK
Sbjct: 676 SERNKKYKGSQDK 688
Score = 734 (263.4 bits), Expect = 2.0e-230, Sum P(3) = 2.0e-230
Identities = 136/211 (64%), Positives = 174/211 (82%)
Query: 14 EEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASS 73
E K KQI+V+++G PGSGKSTFC+ MRSS RPW+RICQD +N GK+GTK QCL A+
Sbjct: 221 EADKAKQIVVLLIGPPGSGKSTFCDTAMRSSHRPWSRICQDIVNNGKAGTKAQCLKMATD 280
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
+L++GKSVF+DRCNL+REQR++F+KLGGPE +VHAVVL+LPA++CISRSVKR HEGNLQ
Sbjct: 281 SLREGKSVFIDRCNLDREQRSEFIKLGGPEFEVHAVVLELPAQVCISRSVKRTGHEGNLQ 340
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSFGQK 193
GG+AAAVVN+MLQ KELPK++EGFSRI C ++ DV A++ Y+ LGP+DTLP G FG+K
Sbjct: 341 GGRAAAVVNKMLQSKELPKVNEGFSRIMFCYSDADVDNAVNMYNKLGPMDTLPSGCFGEK 400
Query: 194 NPDAKIQLGIMKFLKKVDA-PSNTGSTASST 223
D K Q GIMKF KKV A P+++ + A++T
Sbjct: 401 KLDTKSQPGIMKFFKKVSALPASSSNEATNT 431
Score = 730 (262.0 bits), Expect = 2.0e-230, Sum P(3) = 2.0e-230
Identities = 143/247 (57%), Positives = 181/247 (73%)
Query: 506 TGDKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAANLSADNEKIGVSTSKAWGSWAQALY 565
+G+ IK D E++KK K + NL + +L D G SK W +WA AL+
Sbjct: 668 SGEDIKEDS----ERNKKYKGSQDKAVTNNLE-SESLE-DTRGSGKKMSKGWNTWALALH 721
Query: 566 RTAMYPERHKDDLLEISDDVVVLNDLYPKAQKHILVLSRFDGLDRLADVRNEHLQILQTM 625
AM+PERH++ +LE D++VV+ND YPKA+KH+LVL+R + LD L DVR E+LQ+LQ M
Sbjct: 722 SIAMHPERHENVVLEYLDNIVVINDQYPKARKHVLVLARQESLDGLEDVRKENLQLLQEM 781
Query: 626 HAVGMKWAEKFLHEDASLAFRLGYHSAPSMRQLHLHVISQDFNSKHLKNKKHWNSFNTAF 685
H VG+KW ++F +EDASL FRLGYHS PSMRQLHLHVISQDFNS LKNKKHWNSF T+F
Sbjct: 782 HNVGLKWVDRFQNEDASLIFRLGYHSVPSMRQLHLHVISQDFNSDSLKNKKHWNSFTTSF 841
Query: 686 FCDSVDVLEEISNHGKATLKDYDSLLSMELRCHRCRSAHPSIPRLKSHISSCRAPFPSSL 745
F DSVDVLEE+++ GKA + D LL ELRC+RCRSAHP+IP+LKSH+ SC + FP L
Sbjct: 842 FRDSVDVLEEVNSQGKANVASED-LLKGELRCNRCRSAHPNIPKLKSHVRSCHSQFPDHL 900
Query: 746 LENGRLM 752
L+N RL+
Sbjct: 901 LQNNRLV 907
>MGI|MGI:1913658 [details] [associations]
symbol:Aptx "aprataxin" species:10090 "Mus musculus"
[GO:0000012 "single strand break repair" evidence=ISO;IMP]
[GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003684 "damaged DNA binding" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003725
"double-stranded RNA binding" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=ISO;TAS] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006266
"DNA ligation" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008967 "phosphoglycolate
phosphatase activity" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031647 "regulation of protein
stability" evidence=ISO] [GO:0033699 "DNA 5'-adenosine
monophosphate hydrolase activity" evidence=ISO;IMP] [GO:0042542
"response to hydrogen peroxide" evidence=ISO] [GO:0046403
"polynucleotide 3'-phosphatase activity" evidence=ISO] [GO:0046872
"metal ion binding" evidence=TAS] [GO:0047485 "protein N-terminus
binding" evidence=ISO] [GO:0051219 "phosphoprotein binding"
evidence=ISO] InterPro:IPR000253 InterPro:IPR007087
InterPro:IPR008984 InterPro:IPR011146 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51084 SMART:SM00355
MGI:MGI:1913658 GO:GO:0005654 GO:GO:0005730 GO:GO:0046872
GO:GO:0003684 GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20
SUPFAM:SSF49879 GO:GO:0031647 GO:GO:0000790 GO:GO:0003690
GO:GO:0003725 GO:GO:0042542 GO:GO:0006302 Gene3D:3.30.428.10
InterPro:IPR001310 SUPFAM:SSF54197 PROSITE:PS00892
InterPro:IPR019808 GO:GO:0000012 CTD:54840 eggNOG:NOG278510
HOGENOM:HOG000248858 HOVERGEN:HBG050555 KO:K10863 PANTHER:PTHR12486
GO:GO:0033699 GeneTree:ENSGT00570000079163 OMA:PGQVLHM
GO:GO:0008967 GO:GO:0046403 GO:GO:0006266 EMBL:AY040780
EMBL:AY040782 EMBL:AY208844 EMBL:AK005286 EMBL:AK010516
EMBL:AK077351 EMBL:AK088928 EMBL:BC021872 IPI:IPI00404622
IPI:IPI00421211 IPI:IPI00467215 IPI:IPI00475053
RefSeq:NP_001020615.1 RefSeq:NP_079821.3 UniGene:Mm.430710
ProteinModelPortal:Q7TQC5 SMR:Q7TQC5 STRING:Q7TQC5
PhosphoSite:Q7TQC5 PRIDE:Q7TQC5 Ensembl:ENSMUST00000030119
Ensembl:ENSMUST00000068125 Ensembl:ENSMUST00000108103 GeneID:66408
KEGG:mmu:66408 UCSC:uc008shq.1 NextBio:321599 Bgee:Q7TQC5
CleanEx:MM_APTX Genevestigator:Q7TQC5 GermOnline:ENSMUSG00000028411
Uniprot:Q7TQC5
Length = 342
Score = 412 (150.1 bits), Expect = 3.8e-39, Sum P(2) = 3.8e-39
Identities = 89/197 (45%), Positives = 124/197 (62%)
Query: 541 NLSADNEKIGVSTSKAWGSWAQALYRTAMYPERHKDDLLEI--SDDVVVLNDLYPKAQKH 598
++S +K G + ++ G W+Q L + +M KD +++ D VVV+ D YPKA+ H
Sbjct: 148 SVSPKKDKNGATKKESLGHWSQGL-KMSM-----KDPKMQVYKDDQVVVIKDKYPKARHH 201
Query: 599 ILVLSRFDGLDRLADVRNEHLQILQTMHAVGMKWAEKFLHEDASLAFRLGYHSAPSMRQL 658
LVL + + L V +EHL++L+ MHAVG K F + L FRLGYH+ PSM +
Sbjct: 202 WLVLP-WASISSLKVVTSEHLELLKHMHAVGEKVIADFAGS-SKLRFRLGYHAIPSMSHV 259
Query: 659 HLHVISQDFNSKHLKNKKHWNSFNTAFFCDSVDVLEEISNHGKATLKDYD-SLLSMELRC 717
HLHVISQDF+S LKNKKHWNSFNT +F +S V++ + G+ T+KD LL + LRC
Sbjct: 260 HLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIKMVQEAGRVTVKDGTCELLKLPLRC 319
Query: 718 HRCRSAHPSIPRLKSHI 734
H C+ PSIP+LK H+
Sbjct: 320 HECQQLLPSIPQLKEHL 336
Score = 37 (18.1 bits), Expect = 3.8e-39, Sum P(2) = 3.8e-39
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 3 TDIDDTCKAKDEEKK 17
T ID KD+EKK
Sbjct: 72 TSIDSGVIGKDQEKK 86
>UNIPROTKB|F1SE72 [details] [associations]
symbol:APTX "Aprataxin" species:9823 "Sus scrofa"
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0047485
"protein N-terminus binding" evidence=IEA] [GO:0046403
"polynucleotide 3'-phosphatase activity" evidence=IEA] [GO:0042542
"response to hydrogen peroxide" evidence=IEA] [GO:0033699 "DNA
5'-adenosine monophosphate hydrolase activity" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006266
"DNA ligation" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000012 "single strand break repair" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR000253
InterPro:IPR007087 InterPro:IPR008984 InterPro:IPR011146
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS51084 SMART:SM00355
GO:GO:0005654 GO:GO:0005730 GO:GO:0003684 GO:GO:0008270
GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0031647
GO:GO:0000790 GO:GO:0003690 GO:GO:0003725 GO:GO:0042542
GO:GO:0006302 Gene3D:3.30.428.10 InterPro:IPR001310 SUPFAM:SSF54197
PROSITE:PS00892 InterPro:IPR019808 GO:GO:0000012 PANTHER:PTHR12486
GO:GO:0033699 GeneTree:ENSGT00570000079163 OMA:PGQVLHM
GO:GO:0008967 GO:GO:0046403 GO:GO:0006266 EMBL:CU856663
EMBL:CU929631 Ensembl:ENSSSCT00000012043 Uniprot:F1SE72
Length = 342
Score = 412 (150.1 bits), Expect = 9.8e-38, P = 9.8e-38
Identities = 98/245 (40%), Positives = 137/245 (55%)
Query: 494 DHSEDVHGNYISTGDKIKRDGGH---EYEQSKKCKTQNEVGTDINLSRAANLSADNEKIG 550
+ E+ + T K KR G E + S++ K N S+ + + A EK
Sbjct: 99 EFEEEAKSPGLKTHRKRKRSGNSDSVERDASQEAKPSTGAEPGSNPSQCS-VPAKKEKDA 157
Query: 551 VSTSKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPKAQKHILVLSRFDGLDR 610
+ ++ W+Q L + +M E K + + D VVV+ D YPKA+ H LVL + +
Sbjct: 158 ATKKESLSHWSQGL-KISM--EDPKMQVYK-DDQVVVIKDKYPKARYHWLVLP-WASISS 212
Query: 611 LADVRNEHLQILQTMHAVGMKWAEKFLHEDASLAFRLGYHSAPSMRQLHLHVISQDFNSK 670
L V EHL++L+ MH VG K F + L FRLGYH+ PSM +HLHVISQDF+S
Sbjct: 213 LKAVTREHLELLRHMHTVGEKVIADFAGS-SKLRFRLGYHAIPSMSHVHLHVISQDFDSP 271
Query: 671 HLKNKKHWNSFNTAFFCDSVDVLEEISNHGKATLKD-YDSLLSMELRCHRCRSAHPSIPR 729
LKNKKHWNSFNT +F +S V+E + G+ T++D LL + LRCH C+ PSIP+
Sbjct: 272 CLKNKKHWNSFNTEYFLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQ 331
Query: 730 LKSHI 734
LK H+
Sbjct: 332 LKEHL 336
>RGD|628740 [details] [associations]
symbol:Aptx "aprataxin" species:10116 "Rattus norvegicus"
[GO:0000012 "single strand break repair" evidence=IEA;ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0000790 "nuclear
chromatin" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0003684 "damaged DNA binding" evidence=IEA;ISO] [GO:0003690
"double-stranded DNA binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005654 "nucleoplasm"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006266 "DNA ligation" evidence=IEA;ISO] [GO:0006302
"double-strand break repair" evidence=IEA;ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008967 "phosphoglycolate phosphatase activity"
evidence=IEA;ISO] [GO:0031647 "regulation of protein stability"
evidence=IEA;ISO] [GO:0033699 "DNA 5'-adenosine monophosphate
hydrolase activity" evidence=IEA;ISO] [GO:0042542 "response to
hydrogen peroxide" evidence=IEA;ISO] [GO:0046403 "polynucleotide
3'-phosphatase activity" evidence=IEA;ISO] [GO:0047485 "protein
N-terminus binding" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] InterPro:IPR000253 InterPro:IPR007087
InterPro:IPR008984 InterPro:IPR011146 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51084 SMART:SM00355
RGD:628740 GO:GO:0005654 GO:GO:0005730 GO:GO:0046872 GO:GO:0003684
GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0031647 GO:GO:0000790 GO:GO:0003690 GO:GO:0003725
GO:GO:0042542 GO:GO:0006302 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 PROSITE:PS00892 InterPro:IPR019808 GO:GO:0000012
CTD:54840 eggNOG:NOG278510 HOGENOM:HOG000248858 HOVERGEN:HBG050555
KO:K10863 PANTHER:PTHR12486 OrthoDB:EOG4FTW17 GO:GO:0033699
GO:GO:0008967 GO:GO:0046403 GO:GO:0006266 EMBL:AF398235
EMBL:BC078716 IPI:IPI00203252 RefSeq:NP_683687.1 UniGene:Rn.50459
ProteinModelPortal:Q8K4H4 STRING:Q8K4H4 GeneID:259271
KEGG:rno:259271 UCSC:RGD:628740 InParanoid:Q8K4H4 NextBio:624321
ArrayExpress:Q8K4H4 Genevestigator:Q8K4H4
GermOnline:ENSRNOG00000006582 Uniprot:Q8K4H4
Length = 329
Score = 411 (149.7 bits), Expect = 1.3e-37, P = 1.3e-37
Identities = 93/215 (43%), Positives = 131/215 (60%)
Query: 524 CKTQNEVGTDINLSRA-ANLSADNEKIGVSTSKAWGSWAQALYRTAMYPERHKDDLLEI- 581
C +Q E+ + S + ++S K G + ++ G W+Q L + +M KD +++
Sbjct: 118 CDSQ-EMEAEAGASPSQCSVSPKTGKHGAAKEESLGHWSQGL-KISM-----KDPKMQVY 170
Query: 582 -SDDVVVLNDLYPKAQKHILVLSRFDGLDRLADVRNEHLQILQTMHAVGMKWAEKFLHED 640
D VVV+ D YPKA+ H LVL + + L V +EHL++L+ MHAVG K F
Sbjct: 171 KDDQVVVIKDKYPKARHHWLVLP-WASISSLKVVTSEHLELLKHMHAVGEKVIADFTGS- 228
Query: 641 ASLAFRLGYHSAPSMRQLHLHVISQDFNSKHLKNKKHWNSFNTAFFCDSVDVLEEISNHG 700
+ L FRLGYH+ PSM +HLHVISQDF+S LKNKKHWNSFNT +F +S V++ + G
Sbjct: 229 SKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIKMVQEAG 288
Query: 701 KATLKDYD-SLLSMELRCHRCRSAHPSIPRLKSHI 734
+ T+KD LL + LRCH C+ PSIP+LK H+
Sbjct: 289 RVTVKDGTCELLKLPLRCHECQQLLPSIPQLKEHL 323
>UNIPROTKB|F1LMH1 [details] [associations]
symbol:Aptx "Aprataxin" species:10116 "Rattus norvegicus"
[GO:0000012 "single strand break repair" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006266 "DNA ligation" evidence=IEA] [GO:0006302 "double-strand
break repair" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008967 "phosphoglycolate phosphatase activity"
evidence=IEA] [GO:0031647 "regulation of protein stability"
evidence=IEA] [GO:0033699 "DNA 5'-adenosine monophosphate hydrolase
activity" evidence=IEA] [GO:0042542 "response to hydrogen peroxide"
evidence=IEA] [GO:0046403 "polynucleotide 3'-phosphatase activity"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR007087 InterPro:IPR008984
InterPro:IPR011146 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS51084 SMART:SM00355 RGD:628740
GO:GO:0005654 GO:GO:0005730 GO:GO:0003684 GO:GO:0008270
GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0031647
GO:GO:0000790 GO:GO:0003690 GO:GO:0003725 GO:GO:0042542
GO:GO:0006302 Gene3D:3.30.428.10 InterPro:IPR001310 SUPFAM:SSF54197
PROSITE:PS00892 InterPro:IPR019808 GO:GO:0000012 PANTHER:PTHR12486
GO:GO:0033699 GeneTree:ENSGT00570000079163 OMA:PGQVLHM
GO:GO:0008967 GO:GO:0046403 GO:GO:0006266 IPI:IPI00203252
Ensembl:ENSRNOT00000046463 ArrayExpress:F1LMH1 Uniprot:F1LMH1
Length = 331
Score = 411 (149.7 bits), Expect = 1.3e-37, P = 1.3e-37
Identities = 93/215 (43%), Positives = 131/215 (60%)
Query: 524 CKTQNEVGTDINLSRA-ANLSADNEKIGVSTSKAWGSWAQALYRTAMYPERHKDDLLEI- 581
C +Q E+ + S + ++S K G + ++ G W+Q L + +M KD +++
Sbjct: 120 CDSQ-EMEAEAGASPSQCSVSPKTGKHGAAKEESLGHWSQGL-KISM-----KDPKMQVY 172
Query: 582 -SDDVVVLNDLYPKAQKHILVLSRFDGLDRLADVRNEHLQILQTMHAVGMKWAEKFLHED 640
D VVV+ D YPKA+ H LVL + + L V +EHL++L+ MHAVG K F
Sbjct: 173 KDDQVVVIKDKYPKARHHWLVLP-WASISSLKVVTSEHLELLKHMHAVGEKVIADFTGS- 230
Query: 641 ASLAFRLGYHSAPSMRQLHLHVISQDFNSKHLKNKKHWNSFNTAFFCDSVDVLEEISNHG 700
+ L FRLGYH+ PSM +HLHVISQDF+S LKNKKHWNSFNT +F +S V++ + G
Sbjct: 231 SKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIKMVQEAG 290
Query: 701 KATLKDYD-SLLSMELRCHRCRSAHPSIPRLKSHI 734
+ T+KD LL + LRCH C+ PSIP+LK H+
Sbjct: 291 RVTVKDGTCELLKLPLRCHECQQLLPSIPQLKEHL 325
>UNIPROTKB|Q8K4H4 [details] [associations]
symbol:Aptx "Aprataxin" species:10116 "Rattus norvegicus"
[GO:0000012 "single strand break repair" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0006266 "DNA
ligation" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0033699 "DNA 5'-adenosine monophosphate hydrolase activity"
evidence=IEA] [GO:0042542 "response to hydrogen peroxide"
evidence=IEA] [GO:0046403 "polynucleotide 3'-phosphatase activity"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR007087 InterPro:IPR008984
InterPro:IPR011146 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS51084 SMART:SM00355 RGD:628740
GO:GO:0005654 GO:GO:0005730 GO:GO:0046872 GO:GO:0003684
GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0031647 GO:GO:0000790 GO:GO:0003690 GO:GO:0003725
GO:GO:0042542 GO:GO:0006302 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 PROSITE:PS00892 InterPro:IPR019808 GO:GO:0000012
CTD:54840 eggNOG:NOG278510 HOGENOM:HOG000248858 HOVERGEN:HBG050555
KO:K10863 PANTHER:PTHR12486 OrthoDB:EOG4FTW17 GO:GO:0033699
GO:GO:0008967 GO:GO:0046403 GO:GO:0006266 EMBL:AF398235
EMBL:BC078716 IPI:IPI00203252 RefSeq:NP_683687.1 UniGene:Rn.50459
ProteinModelPortal:Q8K4H4 STRING:Q8K4H4 GeneID:259271
KEGG:rno:259271 UCSC:RGD:628740 InParanoid:Q8K4H4 NextBio:624321
ArrayExpress:Q8K4H4 Genevestigator:Q8K4H4
GermOnline:ENSRNOG00000006582 Uniprot:Q8K4H4
Length = 329
Score = 411 (149.7 bits), Expect = 1.3e-37, P = 1.3e-37
Identities = 93/215 (43%), Positives = 131/215 (60%)
Query: 524 CKTQNEVGTDINLSRA-ANLSADNEKIGVSTSKAWGSWAQALYRTAMYPERHKDDLLEI- 581
C +Q E+ + S + ++S K G + ++ G W+Q L + +M KD +++
Sbjct: 118 CDSQ-EMEAEAGASPSQCSVSPKTGKHGAAKEESLGHWSQGL-KISM-----KDPKMQVY 170
Query: 582 -SDDVVVLNDLYPKAQKHILVLSRFDGLDRLADVRNEHLQILQTMHAVGMKWAEKFLHED 640
D VVV+ D YPKA+ H LVL + + L V +EHL++L+ MHAVG K F
Sbjct: 171 KDDQVVVIKDKYPKARHHWLVLP-WASISSLKVVTSEHLELLKHMHAVGEKVIADFTGS- 228
Query: 641 ASLAFRLGYHSAPSMRQLHLHVISQDFNSKHLKNKKHWNSFNTAFFCDSVDVLEEISNHG 700
+ L FRLGYH+ PSM +HLHVISQDF+S LKNKKHWNSFNT +F +S V++ + G
Sbjct: 229 SKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIKMVQEAG 288
Query: 701 KATLKDYD-SLLSMELRCHRCRSAHPSIPRLKSHI 734
+ T+KD LL + LRCH C+ PSIP+LK H+
Sbjct: 289 RVTVKDGTCELLKLPLRCHECQQLLPSIPQLKEHL 323
>UNIPROTKB|P61797 [details] [associations]
symbol:APTX "Aprataxin" species:9615 "Canis lupus
familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000253 InterPro:IPR007087
InterPro:IPR008984 InterPro:IPR011146 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51084 SMART:SM00355
GO:GO:0005654 GO:GO:0005730 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0016787 Gene3D:3.30.428.10 InterPro:IPR001310 SUPFAM:SSF54197
PROSITE:PS00892 InterPro:IPR019808 CTD:54840 eggNOG:NOG278510
HOGENOM:HOG000248858 HOVERGEN:HBG050555 KO:K10863 PANTHER:PTHR12486
EMBL:AY208843 RefSeq:NP_001003355.1 UniGene:Cfa.113
ProteinModelPortal:P61797 STRING:P61797 GeneID:442943
KEGG:cfa:442943 InParanoid:P61797 OrthoDB:EOG4FTW17
NextBio:20831613 Uniprot:P61797
Length = 342
Score = 410 (149.4 bits), Expect = 1.6e-37, P = 1.6e-37
Identities = 96/230 (41%), Positives = 133/230 (57%)
Query: 508 DKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAANLSADNEKIGVSTSKAWGSWAQALYRT 567
D I+RD E E S T E G+D S ++ + K + ++ G W+Q L +
Sbjct: 122 DSIERDAAQEAESS----TGLEPGSD---SSQCSVPLNKGKDAPTKKESLGHWSQGLKIS 174
Query: 568 AMYPER--HKDDLLEISDDVVVLNDLYPKAQKHILVLSRFDGLDRLADVRNEHLQILQTM 625
P+ +KD+ VVV+ D YPKA+ H LVL + + L V EHL++L+ M
Sbjct: 175 MQDPKMQVYKDE------QVVVIKDKYPKARYHWLVLP-WASVSSLKAVTGEHLELLKHM 227
Query: 626 HAVGMKWAEKFLHEDASLAFRLGYHSAPSMRQLHLHVISQDFNSKHLKNKKHWNSFNTAF 685
H VG K F + L FRLGYH+ PSM +HLHVISQDF+S LKNKKHWNSFNT +
Sbjct: 228 HTVGEKMIADFAGS-SKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY 286
Query: 686 FCDSVDVLEEISNHGKATLKD-YDSLLSMELRCHRCRSAHPSIPRLKSHI 734
F +S V+E + + G+ +++D LL + LRCH C+ PSIP+LK H+
Sbjct: 287 FLESQAVIEMVQHAGRVSVRDGMPELLKLPLRCHECQQLLPSIPQLKEHL 336
>UNIPROTKB|F1PHH9 [details] [associations]
symbol:APTX "Aprataxin" species:9615 "Canis lupus
familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] InterPro:IPR000253 InterPro:IPR007087
InterPro:IPR008984 InterPro:IPR011146 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS51084 SMART:SM00355 GO:GO:0003824
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0008152
GO:GO:0005622 Gene3D:3.30.428.10 InterPro:IPR001310 SUPFAM:SSF54197
PROSITE:PS00892 InterPro:IPR019808 PANTHER:PTHR12486
GeneTree:ENSGT00570000079163 OMA:PGQVLHM EMBL:AAEX03007936
Ensembl:ENSCAFT00000002845 Uniprot:F1PHH9
Length = 352
Score = 408 (148.7 bits), Expect = 2.7e-37, P = 2.7e-37
Identities = 96/230 (41%), Positives = 132/230 (57%)
Query: 508 DKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAANLSADNEKIGVSTSKAWGSWAQALYRT 567
D I+RD E E S T E G+D S ++ K + ++ G W+Q L +
Sbjct: 132 DSIERDAAQEAESS----TGLEPGSD---SSQCSVPLKKGKDAPTKKESLGHWSQGLKIS 184
Query: 568 AMYPER--HKDDLLEISDDVVVLNDLYPKAQKHILVLSRFDGLDRLADVRNEHLQILQTM 625
P+ +KD+ VVV+ D YPKA+ H LVL + + L V EHL++L+ M
Sbjct: 185 MQDPKMQVYKDE------QVVVIKDKYPKARYHWLVLP-WASVSSLKAVTGEHLELLKHM 237
Query: 626 HAVGMKWAEKFLHEDASLAFRLGYHSAPSMRQLHLHVISQDFNSKHLKNKKHWNSFNTAF 685
H VG K F + L FRLGYH+ PSM +HLHVISQDF+S LKNKKHWNSFNT +
Sbjct: 238 HTVGEKMIADFAGS-SKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY 296
Query: 686 FCDSVDVLEEISNHGKATLKD-YDSLLSMELRCHRCRSAHPSIPRLKSHI 734
F +S V+E + + G+ +++D LL + LRCH C+ PSIP+LK H+
Sbjct: 297 FLESQAVIEMVQHAGRVSVRDGMPELLKLPLRCHECQQLLPSIPQLKEHL 346
>UNIPROTKB|J9P6H4 [details] [associations]
symbol:APTX "Aprataxin" species:9615 "Canis lupus
familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] InterPro:IPR000253 InterPro:IPR007087
InterPro:IPR008984 InterPro:IPR011146 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS51084 SMART:SM00355 GO:GO:0003824
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0008152
GO:GO:0005622 Gene3D:3.30.428.10 InterPro:IPR001310 SUPFAM:SSF54197
PROSITE:PS00892 InterPro:IPR019808 PANTHER:PTHR12486
GeneTree:ENSGT00570000079163 EMBL:AAEX03007936
Ensembl:ENSCAFT00000043374 Uniprot:J9P6H4
Length = 342
Score = 408 (148.7 bits), Expect = 2.7e-37, P = 2.7e-37
Identities = 96/230 (41%), Positives = 132/230 (57%)
Query: 508 DKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAANLSADNEKIGVSTSKAWGSWAQALYRT 567
D I+RD E E S T E G+D S ++ K + ++ G W+Q L +
Sbjct: 122 DSIERDAAQEAESS----TGLEPGSD---SSQCSVPLKKGKDAPTKKESLGHWSQGLKIS 174
Query: 568 AMYPER--HKDDLLEISDDVVVLNDLYPKAQKHILVLSRFDGLDRLADVRNEHLQILQTM 625
P+ +KD+ VVV+ D YPKA+ H LVL + + L V EHL++L+ M
Sbjct: 175 MQDPKMQVYKDE------QVVVIKDKYPKARYHWLVLP-WASVSSLKAVTGEHLELLKHM 227
Query: 626 HAVGMKWAEKFLHEDASLAFRLGYHSAPSMRQLHLHVISQDFNSKHLKNKKHWNSFNTAF 685
H VG K F + L FRLGYH+ PSM +HLHVISQDF+S LKNKKHWNSFNT +
Sbjct: 228 HTVGEKMIADFAGS-SKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY 286
Query: 686 FCDSVDVLEEISNHGKATLKD-YDSLLSMELRCHRCRSAHPSIPRLKSHI 734
F +S V+E + + G+ +++D LL + LRCH C+ PSIP+LK H+
Sbjct: 287 FLESQAVIEMVQHAGRVSVRDGMPELLKLPLRCHECQQLLPSIPQLKEHL 336
>UNIPROTKB|Q7YRZ1 [details] [associations]
symbol:APTX "Aprataxin" species:9823 "Sus scrofa"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR007087 InterPro:IPR008984
InterPro:IPR011146 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS51084 SMART:SM00355 GO:GO:0005654
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0016787
Gene3D:3.30.428.10 InterPro:IPR001310 SUPFAM:SSF54197
PROSITE:PS00892 InterPro:IPR019808 CTD:54840 eggNOG:NOG278510
HOGENOM:HOG000248858 HOVERGEN:HBG050555 KO:K10863 PANTHER:PTHR12486
OrthoDB:EOG4FTW17 EMBL:AY040779 RefSeq:NP_998899.1
UniGene:Ssc.17333 ProteinModelPortal:Q7YRZ1 STRING:Q7YRZ1
GeneID:387596 KEGG:ssc:387596 Uniprot:Q7YRZ1
Length = 356
Score = 407 (148.3 bits), Expect = 3.4e-37, P = 3.4e-37
Identities = 97/245 (39%), Positives = 136/245 (55%)
Query: 494 DHSEDVHGNYISTGDKIKRDGGH---EYEQSKKCKTQNEVGTDINLSRAANLSADNEKIG 550
+ E+ + T K KR G E + S++ K N S+ + + EK
Sbjct: 113 EFEEEAKSPGLKTHRKRKRSGNSDSVERDASQEAKPSTGAEPGSNPSQCS-VPPKKEKDA 171
Query: 551 VSTSKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPKAQKHILVLSRFDGLDR 610
+ ++ W+Q L + +M E K + + D VVV+ D YPKA+ H LVL + +
Sbjct: 172 ATKKESLSHWSQGL-KISM--EDPKMQVYK-DDQVVVIKDKYPKARYHWLVLP-WASISS 226
Query: 611 LADVRNEHLQILQTMHAVGMKWAEKFLHEDASLAFRLGYHSAPSMRQLHLHVISQDFNSK 670
L V EHL++L+ MH VG K F + L FRLGYH+ PSM +HLHVISQDF+S
Sbjct: 227 LKAVTREHLELLRHMHTVGEKVIADFAGS-SKLRFRLGYHAIPSMSHVHLHVISQDFDSP 285
Query: 671 HLKNKKHWNSFNTAFFCDSVDVLEEISNHGKATLKD-YDSLLSMELRCHRCRSAHPSIPR 729
LKNKKHWNSFNT +F +S V+E + G+ T++D LL + LRCH C+ PSIP+
Sbjct: 286 CLKNKKHWNSFNTEYFLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQ 345
Query: 730 LKSHI 734
LK H+
Sbjct: 346 LKEHL 350
>UNIPROTKB|F1NFX5 [details] [associations]
symbol:APTX "Aprataxin" species:9031 "Gallus gallus"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000012 "single
strand break repair" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006266 "DNA ligation" evidence=IEA] [GO:0006302 "double-strand
break repair" evidence=IEA] [GO:0008967 "phosphoglycolate
phosphatase activity" evidence=IEA] [GO:0031647 "regulation of
protein stability" evidence=IEA] [GO:0033699 "DNA 5'-adenosine
monophosphate hydrolase activity" evidence=IEA] [GO:0042542
"response to hydrogen peroxide" evidence=IEA] [GO:0046403
"polynucleotide 3'-phosphatase activity" evidence=IEA] [GO:0047485
"protein N-terminus binding" evidence=IEA] [GO:0051219
"phosphoprotein binding" evidence=IEA] InterPro:IPR000253
InterPro:IPR007087 InterPro:IPR008984 InterPro:IPR011146
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS51084 SMART:SM00355
GO:GO:0005654 GO:GO:0005730 GO:GO:0003684 GO:GO:0008270
GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0031647
GO:GO:0000790 GO:GO:0003690 GO:GO:0003725 GO:GO:0042542
GO:GO:0006302 Gene3D:3.30.428.10 InterPro:IPR001310 SUPFAM:SSF54197
PROSITE:PS00892 InterPro:IPR019808 GO:GO:0000012 PANTHER:PTHR12486
GO:GO:0033699 GeneTree:ENSGT00570000079163 OMA:PGQVLHM
GO:GO:0008967 GO:GO:0046403 GO:GO:0006266 EMBL:AADN02060095
EMBL:AADN02060096 EMBL:AADN02060097 IPI:IPI00682768
Ensembl:ENSGALT00000034619 ArrayExpress:F1NFX5 Uniprot:F1NFX5
Length = 366
Score = 402 (146.6 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 93/218 (42%), Positives = 130/218 (59%)
Query: 522 KKCKTQNEVGTDINLS--RAANLSADNEKIGVSTSKAWGSWAQALYRTAMYPERHKDDLL 579
KK K V T + + R + S + S + G W+Q L +++M +D +
Sbjct: 151 KKAKKMEVVDTQSSSADLRPSKSSVSPHEGTTSRKEHLGHWSQGL-KSSM-----QDPKV 204
Query: 580 EISDD--VVVLNDLYPKAQKHILVLSRFDGLDRLADVRNEHLQILQTMHAVGMKWAEKFL 637
++ D VV+ D YPKA+ H LVL +D + L V EHL +L+ MHAVG K ++
Sbjct: 205 QVYKDEKAVVIKDKYPKARYHWLVLP-WDSISSLKSVTREHLGLLEHMHAVGQKMIQQCP 263
Query: 638 HEDASLAFRLGYHSAPSMRQLHLHVISQDFNSKHLKNKKHWNSFNTAFFCDSVDVLEEIS 697
++ SL FRLGYH+ PSM QLHLHVISQDF+S LK KKHWNSF T +F +S +V+E +
Sbjct: 264 AKE-SLEFRLGYHAIPSMSQLHLHVISQDFDSPALKTKKHWNSFTTEYFLNSEEVIEMVR 322
Query: 698 NHGKATLKDYDS-LLSMELRCHRCRSAHPSIPRLKSHI 734
+ GK T+ D S LL + LRCH C+ +IP+LK H+
Sbjct: 323 SKGKVTVNDQASELLKLPLRCHLCKQQLSTIPQLKEHL 360
>UNIPROTKB|F1P5K8 [details] [associations]
symbol:APTX "Aprataxin" species:9031 "Gallus gallus"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000253 InterPro:IPR007087
InterPro:IPR008984 InterPro:IPR011146 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS51084 SMART:SM00355 GO:GO:0003824
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0008152
GO:GO:0005622 Gene3D:3.30.428.10 InterPro:IPR001310 SUPFAM:SSF54197
PROSITE:PS00892 InterPro:IPR019808 PANTHER:PTHR12486
GeneTree:ENSGT00570000079163 EMBL:AADN02060095 EMBL:AADN02060096
EMBL:AADN02060097 IPI:IPI00571374 Ensembl:ENSGALT00000003023
ArrayExpress:F1P5K8 Uniprot:F1P5K8
Length = 316
Score = 402 (146.6 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 96/223 (43%), Positives = 133/223 (59%)
Query: 522 KKCKTQNEVGTDINLSRAANLSADNEKI----GVSTSKA---WGSWAQALYRTAMYPERH 574
KK K V T S +A+L + G ++ KA G W+Q L +++M
Sbjct: 99 KKAKKMEVVDTQ---SSSADLRPSKSSVSPHEGTTSRKASEHLGHWSQGL-KSSM----- 149
Query: 575 KDDLLEISDD--VVVLNDLYPKAQKHILVLSRFDGLDRLADVRNEHLQILQTMHAVGMKW 632
+D +++ D VV+ D YPKA+ H LVL +D + L V EHL +L+ MHAVG K
Sbjct: 150 QDPKVQVYKDEKAVVIKDKYPKARYHWLVLP-WDSISSLKSVTREHLGLLEHMHAVGQKM 208
Query: 633 AEKFLHEDASLAFRLGYHSAPSMRQLHLHVISQDFNSKHLKNKKHWNSFNTAFFCDSVDV 692
++ ++ SL FRLGYH+ PSM QLHLHVISQDF+S LK KKHWNSF T +F +S +V
Sbjct: 209 IQQCPAKE-SLEFRLGYHAIPSMSQLHLHVISQDFDSPALKTKKHWNSFTTEYFLNSEEV 267
Query: 693 LEEISNHGKATLKDYDS-LLSMELRCHRCRSAHPSIPRLKSHI 734
+E + + GK T+ D S LL + LRCH C+ +IP+LK H+
Sbjct: 268 IEMVRSKGKVTVNDQASELLKLPLRCHLCKQQLSTIPQLKEHL 310
>UNIPROTKB|P61798 [details] [associations]
symbol:APTX "Aprataxin" species:9031 "Gallus gallus"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0033699 "DNA 5'-adenosine monophosphate hydrolase
activity" evidence=IMP] InterPro:IPR000253 InterPro:IPR007087
InterPro:IPR008984 InterPro:IPR011146 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51084 SMART:SM00355
GO:GO:0005654 GO:GO:0005730 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 Gene3D:2.60.200.20 SUPFAM:SSF49879
Gene3D:3.30.428.10 InterPro:IPR001310 SUPFAM:SSF54197
PROSITE:PS00892 InterPro:IPR019808 eggNOG:NOG278510
HOGENOM:HOG000248858 HOVERGEN:HBG050555 PANTHER:PTHR12486
EMBL:AY208845 IPI:IPI01017207 UniGene:Gga.9488
ProteinModelPortal:P61798 STRING:P61798 PRIDE:P61798 GO:GO:0033699
Uniprot:P61798
Length = 316
Score = 402 (146.6 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 93/218 (42%), Positives = 130/218 (59%)
Query: 522 KKCKTQNEVGTDINLS--RAANLSADNEKIGVSTSKAWGSWAQALYRTAMYPERHKDDLL 579
KK K V T + + R + S + S + G W+Q L +++M +D +
Sbjct: 101 KKAKKMEVVDTQSSSADLRPSKSSVSPHEGTTSRKEHLGHWSQGL-KSSM-----QDPKV 154
Query: 580 EISDD--VVVLNDLYPKAQKHILVLSRFDGLDRLADVRNEHLQILQTMHAVGMKWAEKFL 637
++ D VV+ D YPKA+ H LVL +D + L V EHL +L+ MHAVG K ++
Sbjct: 155 QVYKDEKTVVIKDKYPKARYHWLVLP-WDSISSLKSVTREHLGLLEHMHAVGQKMIQQCP 213
Query: 638 HEDASLAFRLGYHSAPSMRQLHLHVISQDFNSKHLKNKKHWNSFNTAFFCDSVDVLEEIS 697
++ SL FRLGYH+ PSM QLHLHVISQDF+S LK KKHWNSF T +F +S +V+E +
Sbjct: 214 AKE-SLEFRLGYHAIPSMSQLHLHVISQDFDSPALKTKKHWNSFTTEYFLNSEEVIEMVR 272
Query: 698 NHGKATLKDYDS-LLSMELRCHRCRSAHPSIPRLKSHI 734
+ GK T+ D S LL + LRCH C+ +IP+LK H+
Sbjct: 273 SKGKVTVNDQASELLKLPLRCHLCKQQLSTIPQLKEHL 310
>UNIPROTKB|Q7Z2E3 [details] [associations]
symbol:APTX "Aprataxin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008219 "cell
death" evidence=IEA] [GO:0006266 "DNA ligation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000012 "single strand
break repair" evidence=IDA] [GO:0003684 "damaged DNA binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0033699
"DNA 5'-adenosine monophosphate hydrolase activity" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0031647 "regulation of
protein stability" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0003725 "double-stranded RNA binding"
evidence=IDA] [GO:0000785 "chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0042542 "response to hydrogen
peroxide" evidence=IDA] [GO:0008967 "phosphoglycolate phosphatase
activity" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0046403 "polynucleotide 3'-phosphatase activity"
evidence=IDA] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0000790 "nuclear chromatin" evidence=IDA] InterPro:IPR000253
InterPro:IPR007087 InterPro:IPR008984 InterPro:IPR011146
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51084
SMART:SM00355 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0046872 GO:GO:0003684 GO:GO:0008219 GO:GO:0008270
GO:GO:0000785 GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0031647 EMBL:CH471071 GO:GO:0003690 GO:GO:0003725
GO:GO:0042542 GO:GO:0006302 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 PROSITE:PS00892 InterPro:IPR019808 GO:GO:0000012
CTD:54840 eggNOG:NOG278510 HOGENOM:HOG000248858 HOVERGEN:HBG050555
KO:K10863 PANTHER:PTHR12486 GO:GO:0033699 EMBL:AY302067
EMBL:AY302068 EMBL:AY302070 EMBL:AY302071 EMBL:AY302072
EMBL:AY302074 EMBL:AY040777 EMBL:AY208829 EMBL:AY208830
EMBL:AY208831 EMBL:AY208832 EMBL:AY208833 EMBL:AY208834
EMBL:AY208835 EMBL:AY208836 EMBL:AY208837 EMBL:AY208838
EMBL:AY208839 EMBL:AY208840 EMBL:AY208841 EMBL:AY208842
EMBL:AK000164 EMBL:AK055672 EMBL:BX538161 EMBL:AL162590
EMBL:AL353717 EMBL:BC001628 EMBL:BC032650 EMBL:BC104881
EMBL:AJ565850 EMBL:AJ565851 EMBL:AJ565852 EMBL:AJ565853
EMBL:AJ565854 EMBL:AJ565855 EMBL:AJ575566 IPI:IPI00180685
IPI:IPI00375305 IPI:IPI00411460 IPI:IPI00414767 IPI:IPI00420029
IPI:IPI00420030 IPI:IPI00420031 IPI:IPI00420033 IPI:IPI00428971
IPI:IPI00428972 IPI:IPI00554783 IPI:IPI00979014
RefSeq:NP_001182177.1 RefSeq:NP_001182178.1 RefSeq:NP_001182179.1
RefSeq:NP_001182180.1 RefSeq:NP_001182181.1 RefSeq:NP_001182183.1
RefSeq:NP_778239.1 RefSeq:NP_778243.1 UniGene:Hs.20158 PDB:3KT9
PDBsum:3KT9 ProteinModelPortal:Q7Z2E3 SMR:Q7Z2E3 IntAct:Q7Z2E3
MINT:MINT-1205251 STRING:Q7Z2E3 PhosphoSite:Q7Z2E3 DMDM:48428038
PaxDb:Q7Z2E3 PRIDE:Q7Z2E3 DNASU:54840 Ensembl:ENST00000309615
Ensembl:ENST00000379813 Ensembl:ENST00000379817
Ensembl:ENST00000379819 Ensembl:ENST00000379825
Ensembl:ENST00000397172 Ensembl:ENST00000436040
Ensembl:ENST00000460940 Ensembl:ENST00000463596
Ensembl:ENST00000467331 Ensembl:ENST00000468275
Ensembl:ENST00000472896 Ensembl:ENST00000476858
Ensembl:ENST00000479656 Ensembl:ENST00000482687
Ensembl:ENST00000485479 Ensembl:ENST00000494649
Ensembl:ENST00000495360 GeneID:54840 KEGG:hsa:54840 UCSC:uc003zrj.3
UCSC:uc003zrl.3 UCSC:uc003zrr.3 UCSC:uc003zru.3 UCSC:uc003zrw.3
UCSC:uc003zrx.3 GeneCards:GC09M032962 HGNC:HGNC:15984 MIM:208920
MIM:606350 neXtProt:NX_Q7Z2E3 Orphanet:1168 PharmGKB:PA24915
InParanoid:Q7Z2E3 OMA:PGQVLHM SABIO-RK:Q7Z2E3
EvolutionaryTrace:Q7Z2E3 GenomeRNAi:54840 NextBio:57644
ArrayExpress:Q7Z2E3 Bgee:Q7Z2E3 CleanEx:HS_APTX
Genevestigator:Q7Z2E3 GermOnline:ENSG00000137074 GO:GO:0008967
GO:GO:0046403 GO:GO:0006266 Uniprot:Q7Z2E3
Length = 356
Score = 397 (144.8 bits), Expect = 4.2e-36, P = 4.2e-36
Identities = 97/247 (39%), Positives = 136/247 (55%)
Query: 494 DHSEDVHGNYISTGDKIKRDGGHEYEQSKKCKTQNEVGTDINL-SRAANLSADNEKIGVS 552
+ E+ + T K KR G + + + + E GT + S + S +K +
Sbjct: 113 EFEEEAKNPGLETHRKRKRSGNSDSIE-RDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDA 171
Query: 553 TSK--AWGSWAQALYRTAMYPER--HKDDLLEISDDVVVLNDLYPKAQKHILVLSRFDGL 608
K + G W+Q L + P+ +KD+ VVV+ D YPKA+ H LVL + +
Sbjct: 172 PIKKESLGHWSQGLKISMQDPKMQVYKDE------QVVVIKDKYPKARYHWLVLP-WTSI 224
Query: 609 DRLADVRNEHLQILQTMHAVGMKWAEKFLHEDASLAFRLGYHSAPSMRQLHLHVISQDFN 668
L V EHL++L+ MH VG K F + L FRLGYH+ PSM +HLHVISQDF+
Sbjct: 225 SSLKAVAREHLELLKHMHTVGEKVIVDFAGS-SKLRFRLGYHAIPSMSHVHLHVISQDFD 283
Query: 669 SKHLKNKKHWNSFNTAFFCDSVDVLEEISNHGKATLKD-YDSLLSMELRCHRCRSAHPSI 727
S LKNKKHWNSFNT +F +S V+E + G+ T++D LL + LRCH C+ PSI
Sbjct: 284 SPCLKNKKHWNSFNTEYFLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSI 343
Query: 728 PRLKSHI 734
P+LK H+
Sbjct: 344 PQLKEHL 350
>UNIPROTKB|F1MVI2 [details] [associations]
symbol:APTX "Aprataxin" species:9913 "Bos taurus"
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0047485
"protein N-terminus binding" evidence=IEA] [GO:0046403
"polynucleotide 3'-phosphatase activity" evidence=IEA] [GO:0042542
"response to hydrogen peroxide" evidence=IEA] [GO:0033699 "DNA
5'-adenosine monophosphate hydrolase activity" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006266
"DNA ligation" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000012 "single strand break repair" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR000253
InterPro:IPR007087 InterPro:IPR008984 InterPro:IPR011146
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS51084 SMART:SM00355
GO:GO:0005654 GO:GO:0005730 GO:GO:0003684 GO:GO:0008270
GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0031647
GO:GO:0000790 GO:GO:0003690 GO:GO:0003725 GO:GO:0042542
GO:GO:0006302 Gene3D:3.30.428.10 InterPro:IPR001310 SUPFAM:SSF54197
PROSITE:PS00892 InterPro:IPR019808 GO:GO:0000012 PANTHER:PTHR12486
GO:GO:0033699 GeneTree:ENSGT00570000079163 OMA:PGQVLHM
GO:GO:0008967 GO:GO:0046403 GO:GO:0006266 EMBL:DAAA02023851
IPI:IPI00838639 Ensembl:ENSBTAT00000045509 ArrayExpress:F1MVI2
Uniprot:F1MVI2
Length = 356
Score = 393 (143.4 bits), Expect = 1.1e-35, P = 1.1e-35
Identities = 93/246 (37%), Positives = 136/246 (55%)
Query: 494 DHSEDVHGNYISTGDKIKRDGGHE-YEQSKKCKTQNEVGTDINLS-RAANLSADNEKIGV 551
+ E+ + + K KR G + E+ + + G + + ++ EK
Sbjct: 113 EFEEETKSPGLESHRKRKRSGSSDPTERGADPEAEPSTGLEPGSNPHQCSVPPKKEKDAS 172
Query: 552 STSKAWGSWAQALYRTAMYPERHKDDLLEISDD--VVVLNDLYPKAQKHILVLSRFDGLD 609
++ G W+Q L + +M +D +++ D VVV+ D YPKA+ H LVL + +
Sbjct: 173 IKKESLGHWSQGL-KISM-----EDPKMQVYKDEQVVVIKDKYPKARFHWLVLP-WASIS 225
Query: 610 RLADVRNEHLQILQTMHAVGMKWAEKFLHEDASLAFRLGYHSAPSMRQLHLHVISQDFNS 669
L V EHL++L+ MHAVG K F + FRLGYH+ PSM +HLHVISQDF+S
Sbjct: 226 SLKAVTREHLELLRHMHAVGEKVIADFAGS-SKFRFRLGYHAIPSMSHVHLHVISQDFDS 284
Query: 670 KHLKNKKHWNSFNTAFFCDSVDVLEEISNHGKATLKD-YDSLLSMELRCHRCRSAHPSIP 728
LKNKKHWNSFNT +F +S V+E + G+ T++D LL + LRCH C+ PSIP
Sbjct: 285 PCLKNKKHWNSFNTEYFLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIP 344
Query: 729 RLKSHI 734
+LK H+
Sbjct: 345 QLKEHL 350
>UNIPROTKB|Q5EA08 [details] [associations]
symbol:APTX "APTX protein" species:9913 "Bos taurus"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR000253 InterPro:IPR007087
InterPro:IPR008984 InterPro:IPR011146 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS51084 SMART:SM00355 GO:GO:0003824
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0008152
GO:GO:0005622 Gene3D:3.30.428.10 InterPro:IPR001310 SUPFAM:SSF54197
PROSITE:PS00892 InterPro:IPR019808 UniGene:Bt.16472
HOVERGEN:HBG050555 PANTHER:PTHR12486 GeneTree:ENSGT00570000079163
EMBL:DAAA02023851 IPI:IPI00838639 EMBL:BC111163 EMBL:BT020761
STRING:Q5EA08 Ensembl:ENSBTAT00000018534 InParanoid:Q5EA08
Uniprot:Q5EA08
Length = 347
Score = 393 (143.4 bits), Expect = 1.1e-35, P = 1.1e-35
Identities = 93/246 (37%), Positives = 136/246 (55%)
Query: 494 DHSEDVHGNYISTGDKIKRDGGHE-YEQSKKCKTQNEVGTDINLS-RAANLSADNEKIGV 551
+ E+ + + K KR G + E+ + + G + + ++ EK
Sbjct: 104 EFEEETKSPGLESHRKRKRSGSSDPTERGADPEAEPSTGLEPGSNPHQCSVPPKKEKDAS 163
Query: 552 STSKAWGSWAQALYRTAMYPERHKDDLLEISDD--VVVLNDLYPKAQKHILVLSRFDGLD 609
++ G W+Q L + +M +D +++ D VVV+ D YPKA+ H LVL + +
Sbjct: 164 IKKESLGHWSQGL-KISM-----EDPKMQVYKDEQVVVIKDKYPKARFHWLVLP-WASIS 216
Query: 610 RLADVRNEHLQILQTMHAVGMKWAEKFLHEDASLAFRLGYHSAPSMRQLHLHVISQDFNS 669
L V EHL++L+ MHAVG K F + FRLGYH+ PSM +HLHVISQDF+S
Sbjct: 217 SLKAVTREHLELLRHMHAVGEKVIADFAGS-SKFRFRLGYHAIPSMSHVHLHVISQDFDS 275
Query: 670 KHLKNKKHWNSFNTAFFCDSVDVLEEISNHGKATLKD-YDSLLSMELRCHRCRSAHPSIP 728
LKNKKHWNSFNT +F +S V+E + G+ T++D LL + LRCH C+ PSIP
Sbjct: 276 PCLKNKKHWNSFNTEYFLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIP 335
Query: 729 RLKSHI 734
+LK H+
Sbjct: 336 QLKEHL 341
>UNIPROTKB|Q7YRZ2 [details] [associations]
symbol:APTX "Aprataxin" species:9913 "Bos taurus"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR007087 InterPro:IPR008984
InterPro:IPR011146 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS51084 SMART:SM00355 GO:GO:0005654
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0016787
Gene3D:3.30.428.10 InterPro:IPR001310 SUPFAM:SSF54197
PROSITE:PS00892 InterPro:IPR019808 EMBL:AY040778 IPI:IPI00708647
RefSeq:NP_872595.1 UniGene:Bt.16472 ProteinModelPortal:Q7YRZ2
STRING:Q7YRZ2 PRIDE:Q7YRZ2 GeneID:359714 KEGG:bta:359714 CTD:54840
eggNOG:NOG278510 HOGENOM:HOG000248858 HOVERGEN:HBG050555
InParanoid:Q7YRZ2 KO:K10863 NextBio:20812745 PANTHER:PTHR12486
Uniprot:Q7YRZ2
Length = 356
Score = 393 (143.4 bits), Expect = 1.1e-35, P = 1.1e-35
Identities = 93/246 (37%), Positives = 136/246 (55%)
Query: 494 DHSEDVHGNYISTGDKIKRDGGHE-YEQSKKCKTQNEVGTDINLS-RAANLSADNEKIGV 551
+ E+ + + K KR G + E+ + + G + + ++ EK
Sbjct: 113 EFEEETKSPGLESHRKRKRSGSSDPTERGADPEAEPSTGLEPGSNPHQCSVPPKKEKDAS 172
Query: 552 STSKAWGSWAQALYRTAMYPERHKDDLLEISDD--VVVLNDLYPKAQKHILVLSRFDGLD 609
++ G W+Q L + +M +D +++ D VVV+ D YPKA+ H LVL + +
Sbjct: 173 IKKESLGHWSQGL-KISM-----EDPKMQVYKDEQVVVIKDKYPKARFHWLVLP-WASIS 225
Query: 610 RLADVRNEHLQILQTMHAVGMKWAEKFLHEDASLAFRLGYHSAPSMRQLHLHVISQDFNS 669
L V EHL++L+ MHAVG K F + FRLGYH+ PSM +HLHVISQDF+S
Sbjct: 226 SLKAVTREHLELLRHMHAVGEKVIADFAGS-SKFRFRLGYHAIPSMSHVHLHVISQDFDS 284
Query: 670 KHLKNKKHWNSFNTAFFCDSVDVLEEISNHGKATLKD-YDSLLSMELRCHRCRSAHPSIP 728
LKNKKHWNSFNT +F +S V+E + G+ T++D LL + LRCH C+ PSIP
Sbjct: 285 PCLKNKKHWNSFNTEYFLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIP 344
Query: 729 RLKSHI 734
+LK H+
Sbjct: 345 QLKEHL 350
>ZFIN|ZDB-GENE-040628-2 [details] [associations]
symbol:aptx "aprataxin" species:7955 "Danio rerio"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR000253
InterPro:IPR007087 InterPro:IPR008984 InterPro:IPR011146
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51084
SMART:SM00355 ZFIN:ZDB-GENE-040628-2 GO:GO:0005654 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0016787 Gene3D:3.30.428.10
InterPro:IPR001310 SUPFAM:SSF54197 PROSITE:PS00892
InterPro:IPR019808 CTD:54840 eggNOG:NOG278510 HOGENOM:HOG000248858
HOVERGEN:HBG050555 KO:K10863 PANTHER:PTHR12486 OrthoDB:EOG4FTW17
EMBL:AY219903 IPI:IPI00495637 RefSeq:NP_999894.1 UniGene:Dr.90868
ProteinModelPortal:P61799 STRING:P61799 PRIDE:P61799 GeneID:405797
KEGG:dre:405797 InParanoid:P61799 NextBio:20817762 Uniprot:P61799
Length = 324
Score = 366 (133.9 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 81/187 (43%), Positives = 115/187 (61%)
Query: 554 SKAWGSWAQALYRTAMYPER--HKDDLLEISDDVVVLNDLYPKAQKHILVLSRFDGLDRL 611
S++ G W+Q L + P+ +KDD VVV+ D YPKA+ H LVL + + L
Sbjct: 143 SESAGHWSQGLKASMQDPKMQVYKDD------SVVVIKDKYPKARYHWLVLP-WQSISSL 195
Query: 612 ADVRNEHLQILQTMHAVGMKWAEKFLHEDA-SLAFRLGYHSAPSMRQLHLHVISQDFNSK 670
+R+EH+++L+ M V + E+ DA L+FRLGYH+ PSM +HLHVISQDF+S
Sbjct: 196 KALRSEHVELLKHMQRVADQMVEQC--PDAHKLSFRLGYHAIPSMSHVHLHVISQDFDSP 253
Query: 671 HLKNKKHWNSFNTAFFCDSVDVLEEISNHGKATLKD-YDSLLSMELRCHRCRSAHPSIPR 729
LKNKKHWNSF T +F +S DV+ + + GK +K+ LL + LRCH C +IP+
Sbjct: 254 CLKNKKHWNSFTTDYFVESQDVISMLEHDGKVQVKEGAGELLKLPLRCHVCGKEQTTIPK 313
Query: 730 LKSHISS 736
LK H+ +
Sbjct: 314 LKDHLKT 320
Score = 39 (18.8 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 205 KFLKKVDAPSNTGSTASSTQDPVPPQIT 232
K +++ +P+ T TA + P PP+ T
Sbjct: 110 KRAQQIQSPTKT--TADVSDSPPPPKKT 135
>DICTYBASE|DDB_G0272839 [details] [associations]
symbol:DDB_G0272839 "histidine triad (HIT) family
protein" species:44689 "Dictyostelium discoideum" [GO:0008152
"metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR011146
PROSITE:PS51084 dictyBase:DDB_G0272839 GO:GO:0003824 GO:GO:0008152
EMBL:AAFI02000008 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 PROSITE:PS00892 eggNOG:NOG278510 KO:K10863
PANTHER:PTHR12486 EMBL:AY208849 RefSeq:XP_644956.1
ProteinModelPortal:Q558W0 EnsemblProtists:DDB0201560 GeneID:8618634
KEGG:ddi:DDB_G0272839 InParanoid:Q6XUX4 OMA:FEININN Uniprot:Q558W0
Length = 390
Score = 253 (94.1 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 70/222 (31%), Positives = 116/222 (52%)
Query: 499 VHGNYISTGDKIKRDGGHEYEQSKKCKTQNEVGTDINL----SRAANLSA---DNEKIGV 551
++G S I+ D +E E+ K+ + N+ ++ S++ + S D KI +
Sbjct: 154 LNGTTSSIQFTIEEDNENEKEKEKEMELDNDNTNTESIPPITSKSTSTSTSLIDTNKIQL 213
Query: 552 S------TSKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPKAQKHILVLSRF 605
SK G AL PE D +L D V + D YPKA+ H LV+ R
Sbjct: 214 KKHFEDPNSKNVG--LSALVYFCNKPESFLDVVLYYDDKTVAVLDKYPKAKHHYLVIPRV 271
Query: 606 DGLDRLADVRNEHLQILQTMHAVGMKWAEKFL---HEDASLA---FRLGYHSAPSMRQLH 659
+ ++ L ++ + +L+ M+ V + + ++D +L F+LG+H+ PSM++LH
Sbjct: 272 E-INTLDELTPSFIPMLEHMYNVADAIINEIISKDNDDDNLKKSDFKLGFHAIPSMKRLH 330
Query: 660 LHVISQDFNSKHLKNKKHWNSFNTAFFCDSVDVLEEISNHGK 701
LH+IS D+N+K+LKN KHWNSF T F+ +L E+ ++GK
Sbjct: 331 LHIISNDYNTKYLKNNKHWNSFTTEFYIPFDKILNELKSNGK 372
Score = 61 (26.5 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 200 QLGIMKFLKKVD-APSNTGSTASSTQDPVPPQITEEKNSCLEGQEITSLLSDAAGE-EVK 257
Q+ MKF K + P + + D P + +++ SCL I++ L D + E ++K
Sbjct: 14 QIKNMKFKKTISFKPFDINNRI--IYDKEPTIVFKDQKSCLLKDTISTTLEDGSKELKIK 71
Query: 258 -GTENPEVASVNQNGSSSDV 276
G P + S N N SSD+
Sbjct: 72 IGRFTPGLDS-NNNYISSDI 90
>FB|FBgn0038704 [details] [associations]
symbol:CG5316 species:7227 "Drosophila melanogaster"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000012 "single strand break repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0003684
"damaged DNA binding" evidence=ISS] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] InterPro:IPR011146 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51084 SMART:SM00355
EMBL:AE014297 GO:GO:0046872 GO:GO:0003684 GO:GO:0008270
GO:GO:0016787 Gene3D:3.30.428.10 InterPro:IPR001310 SUPFAM:SSF54197
PROSITE:PS00892 InterPro:IPR019808 GO:GO:0000012 eggNOG:NOG278510
KO:K10863 PANTHER:PTHR12486 EMBL:AY118832 EMBL:BT011192
EMBL:BT012473 RefSeq:NP_001247195.1 RefSeq:NP_650805.1
RefSeq:NP_732421.1 RefSeq:NP_732422.1 UniGene:Dm.13958
ProteinModelPortal:Q8MSG8 SMR:Q8MSG8 MINT:MINT-775505 PaxDb:Q8MSG8
EnsemblMetazoa:FBtr0083758 EnsemblMetazoa:FBtr0083760 GeneID:42322
KEGG:dme:Dmel_CG5316 UCSC:CG5316-RA FlyBase:FBgn0038704
GeneTree:ENSGT00570000079163 InParanoid:Q8MSG8 OMA:NNPFRNT
OrthoDB:EOG40RXZ5 PhylomeDB:Q8MSG8 ChiTaRS:CG5316 GenomeRNAi:42322
NextBio:828219 Bgee:Q8MSG8 GermOnline:CG5316 GO:GO:0071011
GO:GO:0000398 Uniprot:Q8MSG8
Length = 662
Score = 276 (102.2 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 71/198 (35%), Positives = 106/198 (53%)
Query: 559 SWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPKAQKHILVLSRFDGLDRLADVRNEH 618
SW+ AL + PE +L+ S+ VV+ D +PKAQ H LVL D + + + H
Sbjct: 2 SWSSALIKDISKPE----NLIISSEIAVVIADKFPKAQHHYLVLPLAD-IPSIFHLNRSH 56
Query: 619 LQILQTMHAVGMKWAE-KFLH-EDASLAFRLGYHSAPSMRQLHLHVISQDFNSKHLKNKK 676
L +L+ +H + E K + +D F +G+H+ PSM++LHLHVIS+DF S LK KK
Sbjct: 57 LSLLEELHLLARNVVEVKGVRWQD----FNVGFHAEPSMQRLHLHVISKDFVSTSLKTKK 112
Query: 677 HWNSFNTAFFCDSVDV---LEEISNHGKATLKDYDSLLSMELRCHRCRSAHPSIPRLKSH 733
HWNSFNT F + LE+ ++ + D LL+ L C++C ++P LK H
Sbjct: 113 HWNSFNTELFVPYTKLYAQLEKENSISRLPKSLKDELLAKPLICNQCEFVARNLPSLKGH 172
Query: 734 ISSCRAPFPSSLLENGRL 751
+ P S+ + RL
Sbjct: 173 LVG-HLQDPKSVCQRVRL 189
Score = 170 (64.9 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 51/161 (31%), Positives = 80/161 (49%)
Query: 578 LLEISDDVVVLNDLYPKAQKHILVLSRFDGLDRLADVRNEHLQILQTMHAVGMKWAEKFL 637
L+E SD VV+ YPK+Q H V+++ + D + + L +L M + + EK
Sbjct: 243 LIE-SDRAVVMKADYPKSQYHFRVVAKEEFRD-ITQLTEAQLPLLDHMMDLANQIIEKQK 300
Query: 638 HEDASLAFRLGYHSAPSMRQLHLHVISQDFNSKHLKNKKHWNSFNTAFFCDSVDVLEEIS 697
H + S F +G+ +L+LHVIS DF S +K HWNSFNT F +S
Sbjct: 301 HLE-SRNFLIGFKVNTFWNRLNLHVISNDFYSMAMKRISHWNSFNTELFMPFQIAYMMLS 359
Query: 698 NHGKA-TLKD--YDSLLSME-LRCHRCRSAHPSIPRLKSHI 734
G ++ + Y++L LRC++C + LK+H+
Sbjct: 360 VQGSIESISEETYNNLQEKTPLRCNQCEFVTNMLLDLKAHL 400
Score = 46 (21.3 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 16/62 (25%), Positives = 32/62 (51%)
Query: 456 LRKAYTSLFEGFLSIVRSQEKLSKGCN-EDIRL----EPSVSQDHSEDVHGNYISTGDKI 510
L +++ SL E + R+ ++ KG +D + EPS+ + H + +++ST K
Sbjct: 52 LNRSHLSLLEELHLLARNVVEV-KGVRWQDFNVGFHAEPSMQRLHLHVISKDFVSTSLKT 110
Query: 511 KR 512
K+
Sbjct: 111 KK 112
>SGD|S000005784 [details] [associations]
symbol:HNT3 "DNA 5' AMP hydrolase involved in DNA repair"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA;IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0033699 "DNA 5'-adenosine monophosphate hydrolase
activity" evidence=IEA;IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] InterPro:IPR011146
InterPro:IPR026963 PROSITE:PS51084 SGD:S000005784 Pfam:PF01230
GO:GO:0005634 GO:GO:0005737 EMBL:BK006948 GO:GO:0003677
GO:GO:0006281 GO:GO:0006974 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 PROSITE:PS00892 eggNOG:NOG278510
HOGENOM:HOG000248858 KO:K10863 PANTHER:PTHR12486 GO:GO:0033699
GeneTree:ENSGT00570000079163 OMA:RKHYNSF OrthoDB:EOG473T13
PANTHER:PTHR12486:SF2 EMBL:M14078 EMBL:Z75166 PIR:S67155
RefSeq:NP_014901.1 ProteinModelPortal:Q08702 DIP:DIP-5388N
IntAct:Q08702 MINT:MINT-518216 STRING:Q08702 EnsemblFungi:YOR258W
GeneID:854432 KEGG:sce:YOR258W CYGD:YOR258w NextBio:976661
Genevestigator:Q08702 GermOnline:YOR258W Uniprot:Q08702
Length = 217
Score = 170 (64.9 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 41/92 (44%), Positives = 54/92 (58%)
Query: 646 RLGYHSAPSMRQLHLHVISQDFNSKHLKNKKHWNSFNTAFFCDSVDVLEEISNHGKATLK 705
++G HS PSM LH+HVIS+DF+S LKNKKH+NSFNT FF D+ N G T K
Sbjct: 117 QVGIHSVPSMANLHIHVISKDFHSVRLKNKKHYNSFNTGFFISWDDLPLNGKNLG--TDK 174
Query: 706 DYDS--LLSMELRCHRC-RSAHPSIPRLKSHI 734
+ ++ L +L C C R+ LK H+
Sbjct: 175 EIETTYLKEHDLLCCYCQRNFSNKFSLLKKHL 206
Score = 86 (35.3 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 559 SWAQALYRTAMYPERHKDDLLEISDDVV-VLNDLYPKAQKHILVLSRFDGLDR 610
SW AL PE DD + DD V ++ D +PK++ H+L+L R L R
Sbjct: 2 SWRYALKNYVTSPETVNDDTVTYFDDKVSIIRDSFPKSECHLLILPRTMQLSR 54
>POMBASE|SPCC18.09c [details] [associations]
symbol:hnt3 "aprataxin Hnt3" species:4896
"Schizosaccharomyces pombe" [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0030983 "mismatched DNA binding" evidence=IDA] [GO:0033699 "DNA
5'-adenosine monophosphate hydrolase activity" evidence=ISS]
InterPro:IPR011146 InterPro:IPR026963 PROSITE:PS51084
PomBase:SPCC18.09c Pfam:PF01230 PDB:3SZQ GO:GO:0005829
GO:GO:0005634 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0008270
GO:GO:0006281 Gene3D:3.30.428.10 InterPro:IPR001310 SUPFAM:SSF54197
eggNOG:NOG278510 KO:K10863 PANTHER:PTHR12486 GO:GO:0033699
PIR:T41152 RefSeq:NP_588388.1 PDB:3SP4 PDB:3SPD PDB:3SPL
PDBsum:3SP4 PDBsum:3SPD PDBsum:3SPL PDBsum:3SZQ
ProteinModelPortal:O74859 STRING:O74859 EnsemblFungi:SPCC18.09c.1
GeneID:2539198 KEGG:spo:SPCC18.09c HOGENOM:HOG000167639 OMA:RKHYNSF
OrthoDB:EOG473T13 NextBio:20800369 GO:GO:0030983
PANTHER:PTHR12486:SF2 Uniprot:O74859
Length = 232
Score = 177 (67.4 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 49/180 (27%), Positives = 92/180 (51%)
Query: 571 PERHKDDLLEISDDVVVLNDLYPKAQKHILVLSRFDGLDRL--ADVRNEHLQILQTMHAV 628
PE +K+ ++ DDVV++ D++PK++ H+L+++R L + ++ +H +++ + +
Sbjct: 45 PESYKN-VIYYDDDVVLVRDMFPKSKMHLLLMTRDPHLTHVHPLEIMMKHRSLVEKLVSY 103
Query: 629 ------GMKWAE------KFLHEDASLAF-RLGYHSAPSMRQLHLHVISQDFNSKHLKNK 675
G+ + E + L +A + ++G+H+ PSM LHLH+++ D S LKN
Sbjct: 104 VQGDLSGLIFDEARNCLSQQLTNEALCNYIKVGFHAGPSMNNLHLHIMTLDHVSPSLKNS 163
Query: 676 KHWNSFNTAFFCDSVDVLEEISNHGKATLKDYDSLLSMELRCHRCRSAHPS-IPRLKSHI 734
H+ SF + FF + G T SL +L+C RC +LK+H+
Sbjct: 164 AHYISFTSPFFVKIDTPTSNLPTRGTLT-----SLFQEDLKCWRCGETFGRHFTKLKAHL 218
>CGD|CAL0000789 [details] [associations]
symbol:orf19.2376 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011146 InterPro:IPR026963 CGD:CAL0000789
GO:GO:0003677 GO:GO:0006281 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 eggNOG:NOG278510 PANTHER:PTHR12486 GO:GO:0033699
PANTHER:PTHR12486:SF2 EMBL:AACQ01000131 EMBL:AACQ01000130
RefSeq:XP_713209.1 RefSeq:XP_713260.1 ProteinModelPortal:Q59UI8
GeneID:3645041 GeneID:3645112 KEGG:cal:CaO19.2376
KEGG:cal:CaO19.9912 Uniprot:Q59UI8
Length = 259
Score = 148 (57.2 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 31/87 (35%), Positives = 50/87 (57%)
Query: 637 LHEDASLAFRLGYHSAPSMRQLHLHVISQDFNSKHLKNKKHWNSFNTAFFCDSVDVLEEI 696
L E + + G HS PS+ LH+HVI+QDF+S ++NKKH+NSF T FF ++ E+
Sbjct: 102 LSEFRNTFIKAGVHSIPSLNNLHVHVITQDFHSPRMRNKKHYNSFTTKFFVPFEELNPEL 161
Query: 697 S-NHGKATLKDYDSLLSMELRCHRCRS 722
+ ++ + T + + S + C S
Sbjct: 162 NESYCRRTSQPFSETESSQNSNSDCNS 188
Score = 85 (35.0 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 559 SWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPKAQKHILVLSR 604
S+ A + +PERH D +L +V+++ D++PK+ +H+LV+ R
Sbjct: 2 SFRDAFQKYIDHPERH-DIVLFHDQNVIIIKDMFPKSTRHLLVIPR 46
>CGD|CAL0001145 [details] [associations]
symbol:orf19.4383 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0033699 "DNA 5'-adenosine monophosphate hydrolase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] InterPro:IPR011146 InterPro:IPR026963 CGD:CAL0000789
GO:GO:0003677 GO:GO:0006281 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 eggNOG:NOG278510 PANTHER:PTHR12486 GO:GO:0033699
PANTHER:PTHR12486:SF2 EMBL:AACQ01000131 EMBL:AACQ01000130
RefSeq:XP_713209.1 RefSeq:XP_713260.1 ProteinModelPortal:Q59UI8
GeneID:3645041 GeneID:3645112 KEGG:cal:CaO19.2376
KEGG:cal:CaO19.9912 Uniprot:Q59UI8
Length = 259
Score = 148 (57.2 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 31/87 (35%), Positives = 50/87 (57%)
Query: 637 LHEDASLAFRLGYHSAPSMRQLHLHVISQDFNSKHLKNKKHWNSFNTAFFCDSVDVLEEI 696
L E + + G HS PS+ LH+HVI+QDF+S ++NKKH+NSF T FF ++ E+
Sbjct: 102 LSEFRNTFIKAGVHSIPSLNNLHVHVITQDFHSPRMRNKKHYNSFTTKFFVPFEELNPEL 161
Query: 697 S-NHGKATLKDYDSLLSMELRCHRCRS 722
+ ++ + T + + S + C S
Sbjct: 162 NESYCRRTSQPFSETESSQNSNSDCNS 188
Score = 85 (35.0 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 559 SWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPKAQKHILVLSR 604
S+ A + +PERH D +L +V+++ D++PK+ +H+LV+ R
Sbjct: 2 SFRDAFQKYIDHPERH-DIVLFHDQNVIIIKDMFPKSTRHLLVIPR 46
>UNIPROTKB|Q59UI8 [details] [associations]
symbol:HNT32 "Potential histidine triad superfamily
protein" species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011146 InterPro:IPR026963 CGD:CAL0000789
GO:GO:0003677 GO:GO:0006281 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 eggNOG:NOG278510 PANTHER:PTHR12486 GO:GO:0033699
PANTHER:PTHR12486:SF2 EMBL:AACQ01000131 EMBL:AACQ01000130
RefSeq:XP_713209.1 RefSeq:XP_713260.1 ProteinModelPortal:Q59UI8
GeneID:3645041 GeneID:3645112 KEGG:cal:CaO19.2376
KEGG:cal:CaO19.9912 Uniprot:Q59UI8
Length = 259
Score = 148 (57.2 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 31/87 (35%), Positives = 50/87 (57%)
Query: 637 LHEDASLAFRLGYHSAPSMRQLHLHVISQDFNSKHLKNKKHWNSFNTAFFCDSVDVLEEI 696
L E + + G HS PS+ LH+HVI+QDF+S ++NKKH+NSF T FF ++ E+
Sbjct: 102 LSEFRNTFIKAGVHSIPSLNNLHVHVITQDFHSPRMRNKKHYNSFTTKFFVPFEELNPEL 161
Query: 697 S-NHGKATLKDYDSLLSMELRCHRCRS 722
+ ++ + T + + S + C S
Sbjct: 162 NESYCRRTSQPFSETESSQNSNSDCNS 188
Score = 85 (35.0 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 559 SWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPKAQKHILVLSR 604
S+ A + +PERH D +L +V+++ D++PK+ +H+LV+ R
Sbjct: 2 SFRDAFQKYIDHPERH-DIVLFHDQNVIIIKDMFPKSTRHLLVIPR 46
>UNIPROTKB|C9JZ40 [details] [associations]
symbol:APTX "Aprataxin" species:9606 "Homo sapiens"
[GO:0003824 "catalytic activity" evidence=IEA] InterPro:IPR000253
InterPro:IPR011146 PROSITE:PS51084 GO:GO:0003824 Gene3D:2.60.200.20
GO:GO:0008152 Gene3D:3.30.428.10 InterPro:IPR001310 SUPFAM:SSF54197
HOGENOM:HOG000248858 PANTHER:PTHR12486 EMBL:AL162590 EMBL:AL353717
HGNC:HGNC:15984 IPI:IPI00946396 ProteinModelPortal:C9JZ40
SMR:C9JZ40 STRING:C9JZ40 Ensembl:ENST00000473221 UCSC:uc003zsa.1
ArrayExpress:C9JZ40 Bgee:C9JZ40 Uniprot:C9JZ40
Length = 216
Score = 169 (64.5 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 56/171 (32%), Positives = 82/171 (47%)
Query: 490 SVSQDHSEDVHGNYISTGDKIKRDGGHEYEQSKKCKTQNEVGTDINL-SRAANLSADNEK 548
S Q+ E+ + T K KR G + + + + E GT + S + S +K
Sbjct: 55 SRQQEFEEEAKNPGLETHRKRKRSGNSDSIE-RDAAQEAEAGTGLEPGSNSGQCSVPLKK 113
Query: 549 IGVSTSK--AWGSWAQALYRTAMYPER--HKDDLLEISDDVVVLNDLYPKAQKHILVLSR 604
+ K + G W+Q L + P+ +KD+ VVV+ D YPKA+ H LVL
Sbjct: 114 GKDAPIKKESLGHWSQGLKISMQDPKMQVYKDE------QVVVIKDKYPKARYHWLVLP- 166
Query: 605 FDGLDRLADVRNEHLQILQTMHAVGMKWAEKFLHEDASLAFRLGYHSAPSM 655
+ + L V EHL++L+ MH VG K F + L FRLGYH+ PSM
Sbjct: 167 WTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGS-SKLRFRLGYHAIPSM 216
>UNIPROTKB|F8W6G5 [details] [associations]
symbol:APTX "Aprataxin" species:9606 "Homo sapiens"
[GO:0003824 "catalytic activity" evidence=IEA] InterPro:IPR000253
InterPro:IPR008984 InterPro:IPR011146 Pfam:PF00498 PROSITE:PS51084
GO:GO:0003824 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0008152
InterPro:IPR001310 SUPFAM:SSF54197 PANTHER:PTHR12486 EMBL:AL162590
EMBL:AL353717 HGNC:HGNC:15984 IPI:IPI00946799
ProteinModelPortal:F8W6G5 SMR:F8W6G5 Ensembl:ENST00000379812
ArrayExpress:F8W6G5 Bgee:F8W6G5 Uniprot:F8W6G5
Length = 198
Score = 155 (59.6 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 41/100 (41%), Positives = 55/100 (55%)
Query: 558 GSWAQALYRTAMYPER--HKDDLLEISDDVVVLNDLYPKAQKHILVLSRFDGLDRLADVR 615
G W+Q L + P+ +KD+ VVV+ D YPKA+ H LVL + + L V
Sbjct: 107 GHWSQGLKISMQDPKMQVYKDE------QVVVIKDKYPKARYHWLVLP-WTSISSLKAVA 159
Query: 616 NEHLQILQTMHAVGMKWAEKFLHEDASLAFRLGYHSAPSM 655
EHL++L+ MH VG K F + L FRLGYH+ PSM
Sbjct: 160 REHLELLKHMHTVGEKVIVDFAGS-SKLRFRLGYHAIPSM 198
>UNIPROTKB|G4MZR7 [details] [associations]
symbol:MGG_07058 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011146 InterPro:IPR026963 Pfam:PF01230 GO:GO:0003677
GO:GO:0006281 Gene3D:3.30.428.10 InterPro:IPR001310 SUPFAM:SSF54197
KO:K10863 PANTHER:PTHR12486 GO:GO:0033699 PANTHER:PTHR12486:SF2
EMBL:CM001232 RefSeq:XP_003715238.1 ProteinModelPortal:G4MZR7
EnsemblFungi:MGG_07058T0 GeneID:2682943 KEGG:mgr:MGG_07058
Uniprot:G4MZR7
Length = 273
Score = 129 (50.5 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 32/96 (33%), Positives = 46/96 (47%)
Query: 640 DASLAFRLGYHSAPSMRQLHLHVISQDFNSKHLKNKKHWNSFNTAFFCDSVDVLEEISNH 699
D ++G H+ PSM LH+H +S D +K H+ SFNT F LEE
Sbjct: 172 DWEAGIKVGVHATPSMNHLHVHFMSPDNVGGSMKKAHHYMSFNTGFLVR----LEEFPLA 227
Query: 700 GK-ATLKDYDSLLSMELRCHRCRSAHPSIPRLKSHI 734
+ K + LS ++ C RC + S +LKSH+
Sbjct: 228 KEDPRWKGGQAYLSQQMTCWRCPESFTSFGKLKSHL 263
Score = 67 (28.6 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 577 DLLEISDDVVVLNDLYPKAQKHILVLSR 604
+++ +DD V + D+YPK+ H+L+L R
Sbjct: 75 NVIYYNDDFVAVRDIYPKSSVHLLLLPR 102
Score = 40 (19.1 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 415 PSTSPLCGREGVTHVIHVLGPNMNPRRPN-CLDG----DYVKGCEILRKAY 460
P P R+ + +L + P+R N + G D +K E LRK Y
Sbjct: 4 PWNRPDLKRKREARIQELLDKSSQPKRQNHVIPGATTDDKIKTMERLRKKY 54
>POMBASE|SPAC23C11.04c [details] [associations]
symbol:pnk1 "DNA kinase/phosphatase Pnk1" species:4896
"Schizosaccharomyces pombe" [GO:0000718 "nucleotide-excision
repair, DNA damage removal" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046403 "polynucleotide
3'-phosphatase activity" evidence=IDA] [GO:0046404 "ATP-dependent
polydeoxyribonucleotide 5'-hydroxyl-kinase activity" evidence=IDA]
PomBase:SPAC23C11.04c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 GO:GO:0046403 GO:GO:0000718 GO:GO:0046404
InterPro:IPR006549 TIGRFAMs:TIGR01662 eggNOG:COG0241
InterPro:IPR013954 Pfam:PF08645 PIR:T38242 RefSeq:NP_593635.2
STRING:O13911 EnsemblFungi:SPAC23C11.04c.1 GeneID:2542032
HOGENOM:HOG000182000 OrthoDB:EOG47M57H NextBio:20803110
InterPro:IPR015636 InterPro:IPR006551 PANTHER:PTHR12083
TIGRFAMs:TIGR01664 Uniprot:O13911
Length = 408
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 43/147 (29%), Positives = 71/147 (48%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
+K Q +V++VG P SGKST E + + + R+ QD + TK +C+ +A A
Sbjct: 251 KKSEHQEIVVLVGFPSSGKSTLAESQIVTQG--YERVNQDILK-----TKSKCIKAAIEA 303
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
LKK KSV +D N E R ++ + E+ + + L +L +V R H Q
Sbjct: 304 LKKEKSVVIDNTNPTIESRKMWIDIAQEFEIPIRCIHLQSSEELARHNNVFRYIHHNQKQ 363
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRI 160
+ A N + ++P + EGF+ +
Sbjct: 364 LPEIA--FNSFKSRFQMPTVEEGFTNV 388
>MGI|MGI:1914097 [details] [associations]
symbol:Hint3 "histidine triad nucleotide binding protein 3"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR011146 PROSITE:PS51084 MGI:MGI:1914097 GO:GO:0005739
GO:GO:0005730 GO:GO:0008152 GO:GO:0016787 eggNOG:COG0537
Gene3D:3.30.428.10 InterPro:IPR001310 SUPFAM:SSF54197
PROSITE:PS00892 PANTHER:PTHR12486 CTD:135114
GeneTree:ENSGT00510000047616 HOGENOM:HOG000061067
HOVERGEN:HBG057291 OMA:NNFTDFT OrthoDB:EOG4JWVFQ EMBL:AY040768
EMBL:AK002482 EMBL:AK007758 EMBL:AK027974 EMBL:BC025065
IPI:IPI00131903 RefSeq:NP_080074.1 UniGene:Mm.46218
ProteinModelPortal:Q9CPS6 SMR:Q9CPS6 STRING:Q9CPS6
PhosphoSite:Q9CPS6 PaxDb:Q9CPS6 PRIDE:Q9CPS6 DNASU:66847
Ensembl:ENSMUST00000161074 GeneID:66847 KEGG:mmu:66847
UCSC:uc007etg.1 InParanoid:Q9CPS6 NextBio:322807 Bgee:Q9CPS6
CleanEx:MM_HINT3 Genevestigator:Q9CPS6 Uniprot:Q9CPS6
Length = 165
Score = 123 (48.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 33/123 (26%), Positives = 61/123 (49%)
Query: 545 DNEKIGVSTSKAWGSWAQALYRTAMYPERHKDDLLEI-SDDVVVLNDLYPKAQKHILVLS 603
D E TS++W + ++ + K +L ++D+V D+ P A H LV+
Sbjct: 13 DPEGSSPGTSESWNYDSNCVFCRVAAGQEPKTELFHCENEDLVCFKDIKPAALYHYLVVP 72
Query: 604 RFDGLDRLADVRNEHLQILQTMHAVGMKWAEKFLHEDASLAFRLGYHSAP--SMRQLHLH 661
+ + D+ +H++++++M A G E+ D + R+G+H P S+ LHLH
Sbjct: 73 K-KHIGSCKDLNKDHIEMVESMVAAGKTMLERNNFTDFT-DVRMGFHVPPFCSISHLHLH 130
Query: 662 VIS 664
VI+
Sbjct: 131 VIA 133
>UNIPROTKB|F1PKA3 [details] [associations]
symbol:HINT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR011146 PROSITE:PS51084 GO:GO:0003824 GO:GO:0008152
Gene3D:3.30.428.10 InterPro:IPR001310 SUPFAM:SSF54197
PRINTS:PR00332 PANTHER:PTHR12486 GeneTree:ENSGT00510000047616
OMA:NNFTDFT EMBL:AAEX03000426 ProteinModelPortal:F1PKA3
Ensembl:ENSCAFT00000001613 Uniprot:F1PKA3
Length = 116
Score = 116 (45.9 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 27/85 (31%), Positives = 49/85 (57%)
Query: 582 SDDVVVLNDLYPKAQKHILVLSRFDGLDRLADVRNEHLQILQTMHAVGMKWAEKFLHEDA 641
++D+V D+ P A H LV+ + L +++ +H++++++M AVG E+ D
Sbjct: 2 NEDLVCFKDIKPAAPHHYLVVPK-KHLGNCRELKKDHIELVESMVAVGKTILERNNFTDF 60
Query: 642 SLAFRLGYHSAP--SMRQLHLHVIS 664
A R+G+H P S+ LHLHV++
Sbjct: 61 KNA-RMGFHMPPFCSISHLHLHVLA 84
>GENEDB_PFALCIPARUM|PF08_0059 [details] [associations]
symbol:PF08_0059 "protein kinase c
inhibitor-like protein, putative" species:5833 "Plasmodium
falciparum" [GO:0008426 "protein kinase C inhibitor activity"
evidence=ISS] InterPro:IPR011146 PROSITE:PS51084 Pfam:PF01230
GO:GO:0016301 Gene3D:3.30.428.10 InterPro:IPR001310
PANTHER:PTHR23089 SUPFAM:SSF54197 PROSITE:PS00892
InterPro:IPR019808 PRINTS:PR00332 EMBL:AL844507
HOGENOM:HOG000061064 RefSeq:XP_001349350.2
ProteinModelPortal:Q7K6B1 IntAct:Q7K6B1 MINT:MINT-1551576
EnsemblProtists:PF08_0059:mRNA GeneID:2655259 KEGG:pfa:PF08_0059
EuPathDB:PlasmoDB:PF3D7_0817500 ProtClustDB:CLSZ2500684
Uniprot:Q7K6B1
Length = 185
Score = 126 (49.4 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 43/150 (28%), Positives = 69/150 (46%)
Query: 518 YEQSKKCKTQNEVGTDINLSRAANLSADNEKIGVSTSKAWGSWAQALYRTAMYPERHKDD 577
Y K +N+ T I R A ++ + E+ + K +++ E D
Sbjct: 32 YSTFVKLSYKNKFMTGILTRRLAKMADEEERALEAAGKDENG--DSIFGKIARGEVPVDA 89
Query: 578 LLEISDDVVVLNDLYPKAQKHILVL-SRFDGLDRLADVRNEHLQIL-QTMHAVGMKWAEK 635
+ E D V+ ND+YP+A HI+V+ R DGL RL+ +H +IL M AV + K
Sbjct: 90 VYE-DDKVIAFNDIYPQAPVHIIVIPKRRDGLTRLSKAEEKHKEILGHLMWAVA-EIVRK 147
Query: 636 FLHEDASLAFRLGYHSAPSMRQLHLHVISQ 665
D L G + S+ LHLH++++
Sbjct: 148 NNLGDFRLVVNNGPEACQSIYYLHLHILAK 177
>DICTYBASE|DDB_G0292298 [details] [associations]
symbol:DDB_G0292298 species:44689 "Dictyostelium
discoideum" [GO:0008152 "metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] InterPro:IPR011146
PROSITE:PS51084 dictyBase:DDB_G0292298 GO:GO:0003824 GO:GO:0008152
EMBL:AAFI02000189 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 PANTHER:PTHR12486 eggNOG:NOG254977
RefSeq:XP_629686.1 ProteinModelPortal:Q54DF5
EnsemblProtists:DDB0184312 GeneID:8628602 KEGG:ddi:DDB_G0292298
InParanoid:Q54DF5 OMA:NDRTPKA Uniprot:Q54DF5
Length = 166
Score = 118 (46.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 37/121 (30%), Positives = 59/121 (48%)
Query: 581 ISDDVVVLNDLYPKAQKHILVLSRFDGLDRLADVRNEHLQILQTMHAVGMKW-AEKFLHE 639
I +V+V ND PKA H L+ R + + + + + + +L M V + AEKF +
Sbjct: 48 IFQNVIVFNDRTPKATVHYLICPR-EHIVSIKTLTQKDIPVLVEMKQVADQLIAEKFPGQ 106
Query: 640 DASLAFRLGYHSAP--SMRQLHLHVISQDFNSKHLKNKKHWNSFNTAFFCDSVDVLEEIS 697
+ LG+HS P S++ LHLH++ F K K + F +F D V+ E+
Sbjct: 107 SGIV---LGFHSPPFYSVKHLHLHLLVPPFTPK-FKKHSYAPHFGGLWFKDVNTVINELY 162
Query: 698 N 698
N
Sbjct: 163 N 163
>WB|WBGene00009010 [details] [associations]
symbol:F21D5.5 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0019915 "lipid storage" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] GO:GO:0008340 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 GO:GO:0019915 GO:GO:0003690
GeneTree:ENSGT00570000079163 InterPro:IPR006549 TIGRFAMs:TIGR01662
eggNOG:COG0241 InterPro:IPR013954 Pfam:PF08645 InterPro:IPR015636
InterPro:IPR006551 PANTHER:PTHR12083 TIGRFAMs:TIGR01664
HOGENOM:HOG000031466 KO:K08073 OMA:SWQRCVT EMBL:Z54271
EMBL:AF292046 PIR:T21197 RefSeq:NP_501503.1 UniGene:Cel.19445
ProteinModelPortal:Q19683 SMR:Q19683 PaxDb:Q19683 PRIDE:Q19683
EnsemblMetazoa:F21D5.5.1 EnsemblMetazoa:F21D5.5.2 GeneID:177681
KEGG:cel:CELE_F21D5.5 UCSC:F21D5.5 CTD:177681 WormBase:F21D5.5
InParanoid:Q19683 NextBio:897908 Uniprot:Q19683
Length = 407
Score = 128 (50.1 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 43/148 (29%), Positives = 78/148 (52%)
Query: 16 KKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSAL 75
K ++ +++MVG PGSGKSTF + M + + +DTI GT +C+ + S L
Sbjct: 246 KSSEKEIILMVGFPGSGKSTFAK--MLGHQHDYKIVNRDTI-----GTWQKCVAATRSYL 298
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKL-CISRSVK-RIEHEGNLQ 133
GKSV +D + + E R ++ + E+ V ++ + +++ R+ + N
Sbjct: 299 ADGKSVVIDNTSPDLESRKRYIDVA-KELGVPIRCFEMNCSMEHAQHNIRFRVLTDDN-- 355
Query: 134 GGKAAAVVNRMLQKKEL-PKLSEGFSRI 160
+ +++V R+ + K + P LSEGFS+I
Sbjct: 356 AAEISSMVLRIHKGKYVEPTLSEGFSQI 383
>UNIPROTKB|E2R0U3 [details] [associations]
symbol:PNKP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019201 "nucleotide kinase activity"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0046404 "ATP-dependent
polydeoxyribonucleotide 5'-hydroxyl-kinase activity" evidence=IEA]
[GO:0046403 "polynucleotide 3'-phosphatase activity" evidence=IEA]
[GO:0042769 "DNA damage response, detection of DNA damage"
evidence=IEA] InterPro:IPR000253 InterPro:IPR008984 GO:GO:0006979
GO:GO:0005730 Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 GO:GO:0006281 Gene3D:2.60.200.20 SUPFAM:SSF49879
GeneTree:ENSGT00570000079163 GO:GO:0046403 GO:GO:0046404
GO:GO:0042769 InterPro:IPR006549 TIGRFAMs:TIGR01662
InterPro:IPR013954 Pfam:PF08645 GO:GO:0019201 InterPro:IPR015636
InterPro:IPR006551 PANTHER:PTHR12083 TIGRFAMs:TIGR01664 CTD:11284
KO:K08073 OMA:SWQRCVT InterPro:IPR006550 TIGRFAMs:TIGR01663
EMBL:AAEX03000795 EMBL:AAEX03000794 RefSeq:XP_541488.2
Ensembl:ENSCAFT00000005610 GeneID:484373 KEGG:cfa:484373
Uniprot:E2R0U3
Length = 521
Score = 121 (47.7 bits), Expect = 0.00071, P = 0.00071
Identities = 41/141 (29%), Positives = 69/141 (48%)
Query: 22 LVIMVGAPGSGKSTFC-EHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+V+ VG PG+GKSTF EH++ + + + +DT+ G+ +C+T+ +ALK+ K
Sbjct: 367 VVVAVGFPGAGKSTFLQEHLVSAG---YVHVNRDTL-----GSWQRCVTTCENALKQRKR 418
Query: 81 VFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRI-EHEGNLQGGKAAA 139
V +D N + R ++K + V L +R R E G+ +
Sbjct: 419 VVIDNTNPDPPTRARYIKCAR-DAGVPCRCFLFSTTLEHARHNNRFREMTGSSHAPVSDV 477
Query: 140 VVNRMLQKKELPKLSEGFSRI 160
V+ ++ E P L+EGFS I
Sbjct: 478 VMYGYRKQFEAPTLAEGFSAI 498
>DICTYBASE|DDB_G0281229 [details] [associations]
symbol:pnkp "putative bifunctional polynucleotide
phosphatase/kinase" species:44689 "Dictyostelium discoideum"
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=ISS] [GO:0005958 "DNA-dependent protein
kinase-DNA ligase 4 complex" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0046939 "nucleotide
phosphorylation" evidence=ISS] [GO:0046403 "polynucleotide
3'-phosphatase activity" evidence=ISS] [GO:0042769 "DNA damage
response, detection of DNA damage" evidence=ISS] [GO:0019201
"nucleotide kinase activity" evidence=ISS] [GO:0009314 "response to
radiation" evidence=ISS] [GO:0006979 "response to oxidative stress"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006261
"DNA-dependent DNA replication" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0004519
"endonuclease activity" evidence=ISS] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003034 Pfam:PF02037 PROSITE:PS50800
SMART:SM00513 dictyBase:DDB_G0281229 GO:GO:0005524 GO:GO:0006979
GenomeReviews:CM000152_GR GO:GO:0003677 Gene3D:3.40.50.1000
InterPro:IPR023214 SUPFAM:SSF56784 EMBL:AAFI02000040 GO:GO:0006261
Gene3D:1.10.720.30 GO:GO:0004519 GO:GO:0009314 GO:GO:0046403
GO:GO:0005958 GO:GO:0006303 GO:GO:0042769 InterPro:IPR006549
TIGRFAMs:TIGR01662 eggNOG:COG0241 InterPro:IPR013954 Pfam:PF08645
GO:GO:0019201 InterPro:IPR015636 InterPro:IPR006551
PANTHER:PTHR12083 TIGRFAMs:TIGR01664 KO:K08073 RefSeq:XP_640898.1
ProteinModelPortal:Q54U78 EnsemblProtists:DDB0220676 GeneID:8622956
KEGG:ddi:DDB_G0281229 InParanoid:Q54U78 OMA:GRKFPTG Uniprot:Q54U78
Length = 544
Score = 121 (47.7 bits), Expect = 0.00075, P = 0.00075
Identities = 30/78 (38%), Positives = 45/78 (57%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+VI VG P +GKSTF + +A I QDT+ K QCL +A++AL +GKSV
Sbjct: 386 MVISVGYPAAGKSTFARKYFGPAG--YAIINQDTLKD-----KAQCLKAANAALAQGKSV 438
Query: 82 FLDRCNLEREQRTDFVKL 99
+D N ++ R +++ L
Sbjct: 439 IIDNTNPTKDVRAEYLAL 456
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.132 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 761 761 0.00091 121 3 11 22 0.43 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 621 (66 KB)
Total size of DFA: 396 KB (2193 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 74.22u 0.10s 74.32t Elapsed: 00:00:03
Total cpu time: 74.22u 0.10s 74.32t Elapsed: 00:00:03
Start: Tue May 21 02:19:32 2013 End: Tue May 21 02:19:35 2013