BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004324
(761 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255561657|ref|XP_002521838.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538876|gb|EEF40474.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 1043 bits (2698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/766 (65%), Positives = 615/766 (80%), Gaps = 35/766 (4%)
Query: 24 PHVTTVRTPRSYHFLSAPLSSATSQSTFVEQLAGEK--DSSQEEKWDMFKNSDAESGSVD 81
P + T+ + H ++ + +S +T EQLA E S EEKWD+ +D E
Sbjct: 73 PFLRTLHISPNKHKKTSSFCTLSSFNTSAEQLACESLSPSKNEEKWDISSYNDNEHEIFK 132
Query: 82 FDVGT-AGSEMRHLGEPVVEVIELEELPEQWRRAKLAWLCKELPSHKGGTLVRILNAQKK 140
FD + AG +++HL P +EV EL+ELPEQWRRA+LAWLCK+LP+HK GTLV+ILNAQKK
Sbjct: 133 FDGDSGAGVDLKHLDTPALEVKELQELPEQWRRARLAWLCKQLPAHKAGTLVKILNAQKK 192
Query: 141 WLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCR 200
W+RQED TY+AVHCMRIRENE GFRVY+WMMQQHWYRFDF LATKLADYMGKERKFAKCR
Sbjct: 193 WMRQEDATYIAVHCMRIRENEAGFRVYKWMMQQHWYRFDFGLATKLADYMGKERKFAKCR 252
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
+IFDDIINQGRVPSE TFHILI+AYLSAPVQGCL+EAC+IYNRMIQLGGYQPR SLHNSL
Sbjct: 253 EIFDDIINQGRVPSESTFHILIIAYLSAPVQGCLEEACTIYNRMIQLGGYQPRLSLHNSL 312
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
FRALVSKPGG +K+YL+QAEFI+HNL+TSGLEIQ DIY GLIWLHSYQDNIDK RI+ ++
Sbjct: 313 FRALVSKPGGFAKHYLKQAEFIYHNLVTSGLEIQNDIYGGLIWLHSYQDNIDKVRIASIR 372
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
+EM+QAG EG+E+LLS++R C+KEGDVE+AE+TWL+LL+ D G+PT AFVY+ME +AK+
Sbjct: 373 EEMKQAGIMEGREILLSIMRACSKEGDVEEAERTWLKLLQVDGGLPTQAFVYRMEVFAKL 432
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
GE MKSLE FREMQE LGS+S+ AYHKIIE++ +A+E EL ESLM+EF+++G+KPLMPS+
Sbjct: 433 GEHMKSLETFREMQELLGSSSIAAYHKIIEVVSQAQEVELAESLMQEFIKSGLKPLMPSF 492
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
+L NMYLNL +H++L F CLE CRPNR IY +YL+SL GN++KAEE FN+M S+
Sbjct: 493 TDLMNMYLNLNLHEKLESTFFACLENCRPNRNIYNVYLDSLVKVGNLDKAEEAFNNMCSN 552
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVK 560
+ +GVN RSCN IL YLSSGD+VKAEKIYDLMC KKY+IE + MEKLDYVLSL+RK VK
Sbjct: 553 EAVGVNIRSCNTILRGYLSSGDYVKAEKIYDLMCQKKYDIEPSLMEKLDYVLSLSRKVVK 612
Query: 561 KPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHE 620
KP+SL LS +QRE L+GLLLGGL +ESD+ RK+HMIRF+FNENS H++LRR+LYD+YHE
Sbjct: 613 KPLSLKLSKDQREILVGLLLGGLRVESDDNRKKHMIRFEFNENSSTHAILRRHLYDKYHE 672
Query: 621 WLHPSFK--------------------------FWPKGRLVIPKLIHRWLTPRALAYWFM 654
WLHPS K FWPKG+ +IPKLIHRWL+P+ LA+W+M
Sbjct: 673 WLHPSCKLSDGSDGASYRFSTISHSYFSFYAEQFWPKGQPMIPKLIHRWLSPQVLAFWYM 732
Query: 655 YGGHRTSVGDILLKLKVSSEGIALVFKTLKARSLDCRVKKKGRVFWIGFLGSNSTLFWKL 714
Y GHRTS GDILLKLK S EG+ VFKTLK++SL+C+VK+KGRVFWIGFLG++S FWKL
Sbjct: 733 YAGHRTSSGDILLKLKGSREGVEKVFKTLKSKSLNCKVKRKGRVFWIGFLGNDSVWFWKL 792
Query: 715 IEPYVLDELKEDLLNEGSEYRKLDTQNINFDCGSDSDEKASDYSDD 760
+EPY+LD+LK L G + + +NINFD GSD S+YSDD
Sbjct: 793 VEPYILDDLKL-FLKAGDQTLEYSAENINFDSGSD-----SEYSDD 832
>gi|225428729|ref|XP_002281969.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15820-like [Vitis vinifera]
Length = 823
Score = 1039 bits (2687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/779 (66%), Positives = 609/779 (78%), Gaps = 40/779 (5%)
Query: 9 LPSITLSLQRHVSFFPHVTTVRTPRSYHFLSAPLSSATSQSTFVEQLAGEKDSSQEEKWD 68
L S++LS FFP + T S F PL A S+FVEQ+ GE + + E +
Sbjct: 57 LCSLSLSNYSKSFFFP-LPTTNIRHSSLFRRPPL--AKPLSSFVEQVVGESERDENEGF- 112
Query: 69 MFKNSDAESGSVDFDVGTAGSEMRHLGEPVVEVIELEELPEQWRRAKLAWLCKELPSHKG 128
+ E S DF V +++RHL P +EV ELEELPEQWRR+KLAWLCKELP+HK
Sbjct: 113 ---SRGGEGESFDFGVAFGSTDLRHLSSPSLEVKELEELPEQWRRSKLAWLCKELPAHKP 169
Query: 129 GTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLAD 188
TL+RILNAQKKW+RQED TY+AVHCMRIRENETGFRVY+WMMQQHW++FDFALATKLAD
Sbjct: 170 ATLIRILNAQKKWVRQEDATYIAVHCMRIRENETGFRVYKWMMQQHWFQFDFALATKLAD 229
Query: 189 YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG 248
YMGKERKF+KCR+IFDDII QG VP E TFHILI+AYLSA VQGCLDEAC IYNRMIQLG
Sbjct: 230 YMGKERKFSKCREIFDDIIKQGLVPCESTFHILIIAYLSASVQGCLDEACGIYNRMIQLG 289
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
GYQPR SLHNSLFRALV +PGG SKY+L+QAEFIFHNL+T G EI KD+Y GLIWLHSYQ
Sbjct: 290 GYQPRLSLHNSLFRALVGQPGGSSKYFLKQAEFIFHNLVTFGFEIHKDVYGGLIWLHSYQ 349
Query: 309 DNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
D ID+ERI+ L++EMQ AG EE ++VLLS+LR C+KEGDVE+AEKTWL+LL SD IP+
Sbjct: 350 DTIDRERIASLREEMQLAGIEESRDVLLSILRACSKEGDVEEAEKTWLKLLHSDCAIPSQ 409
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
FVY+ME YAK+GE MKSLEIFREMQE+LGS SV AYHKIIE+L KA+E EL ESLM EF
Sbjct: 410 GFVYRMEVYAKVGEPMKSLEIFREMQEQLGSTSVVAYHKIIEVLSKAQEIELVESLMTEF 469
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIE 488
+ +GMKPLMPSYI+L NMY NL +HD+L AF ECLEKCRPNR IY IY++SL GN++
Sbjct: 470 INSGMKPLMPSYIDLMNMYFNLSLHDKLEAAFYECLEKCRPNRAIYNIYMDSLVQIGNLD 529
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL 548
KAEEIFN M+S+ IGVNT+SCN ILS YLS GD++KAEKIYDLMC KKY I++ MEKL
Sbjct: 530 KAEEIFNQMYSNGAIGVNTKSCNTILSGYLSCGDYLKAEKIYDLMCQKKYAIDAPLMEKL 589
Query: 549 DYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHS 608
DYVLSL+RK VK+PVSL LS EQRE LIGLLLGGL +ESDE+RK H+I F+FNENS HS
Sbjct: 590 DYVLSLSRKVVKRPVSLKLSKEQREILIGLLLGGLQMESDEERKNHVIYFEFNENSGAHS 649
Query: 609 VLRRYLYDQYHEWLHPSFK--------------------------FWPKGRLVIPKLIHR 642
VLRR++++QYHEWL+ S K FWP+GR +IPKLIHR
Sbjct: 650 VLRRHIHEQYHEWLNSSSKLSDDNDDVPYKFSTISHSYFGFYADQFWPRGRPMIPKLIHR 709
Query: 643 WLTPRALAYWFMYGGHRTSVGDILLKLKVSSEGIALVFKTLKARSLDCRVKKKGRVFWIG 702
WL+PR LAYW+MYGGHRTS GDILLKLK S EG+ V +TLKA+S+DCRVK+KG VFWIG
Sbjct: 710 WLSPRVLAYWYMYGGHRTSSGDILLKLKGSREGVEKVVRTLKAQSMDCRVKRKGTVFWIG 769
Query: 703 FLGSNSTLFWKLIEPYVLDELKEDLLNEGSEYRKLDTQNINFDCGSDSDEKASDYSDDD 761
LGSNST FWKLIEPY+LD++K D + G + I+F GSD+DE A+DYSD++
Sbjct: 770 LLGSNSTWFWKLIEPYILDDVK-DFVKAGCQ------NTISFGSGSDTDENAADYSDNE 821
>gi|297741318|emb|CBI32449.3| unnamed protein product [Vitis vinifera]
Length = 790
Score = 1038 bits (2683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/779 (66%), Positives = 609/779 (78%), Gaps = 40/779 (5%)
Query: 9 LPSITLSLQRHVSFFPHVTTVRTPRSYHFLSAPLSSATSQSTFVEQLAGEKDSSQEEKWD 68
L S++LS FFP + T S F PL A S+FVEQ+ GE + + E +
Sbjct: 24 LCSLSLSNYSKSFFFP-LPTTNIRHSSLFRRPPL--AKPLSSFVEQVVGESERDENEGF- 79
Query: 69 MFKNSDAESGSVDFDVGTAGSEMRHLGEPVVEVIELEELPEQWRRAKLAWLCKELPSHKG 128
+ E S DF V +++RHL P +EV ELEELPEQWRR+KLAWLCKELP+HK
Sbjct: 80 ---SRGGEGESFDFGVAFGSTDLRHLSSPSLEVKELEELPEQWRRSKLAWLCKELPAHKP 136
Query: 129 GTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLAD 188
TL+RILNAQKKW+RQED TY+AVHCMRIRENETGFRVY+WMMQQHW++FDFALATKLAD
Sbjct: 137 ATLIRILNAQKKWVRQEDATYIAVHCMRIRENETGFRVYKWMMQQHWFQFDFALATKLAD 196
Query: 189 YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG 248
YMGKERKF+KCR+IFDDII QG VP E TFHILI+AYLSA VQGCLDEAC IYNRMIQLG
Sbjct: 197 YMGKERKFSKCREIFDDIIKQGLVPCESTFHILIIAYLSASVQGCLDEACGIYNRMIQLG 256
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
GYQPR SLHNSLFRALV +PGG SKY+L+QAEFIFHNL+T G EI KD+Y GLIWLHSYQ
Sbjct: 257 GYQPRLSLHNSLFRALVGQPGGSSKYFLKQAEFIFHNLVTFGFEIHKDVYGGLIWLHSYQ 316
Query: 309 DNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
D ID+ERI+ L++EMQ AG EE ++VLLS+LR C+KEGDVE+AEKTWL+LL SD IP+
Sbjct: 317 DTIDRERIASLREEMQLAGIEESRDVLLSILRACSKEGDVEEAEKTWLKLLHSDCAIPSQ 376
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
FVY+ME YAK+GE MKSLEIFREMQE+LGS SV AYHKIIE+L KA+E EL ESLM EF
Sbjct: 377 GFVYRMEVYAKVGEPMKSLEIFREMQEQLGSTSVVAYHKIIEVLSKAQEIELVESLMTEF 436
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIE 488
+ +GMKPLMPSYI+L NMY NL +HD+L AF ECLEKCRPNR IY IY++SL GN++
Sbjct: 437 INSGMKPLMPSYIDLMNMYFNLSLHDKLEAAFYECLEKCRPNRAIYNIYMDSLVQIGNLD 496
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL 548
KAEEIFN M+S+ IGVNT+SCN ILS YLS GD++KAEKIYDLMC KKY I++ MEKL
Sbjct: 497 KAEEIFNQMYSNGAIGVNTKSCNTILSGYLSCGDYLKAEKIYDLMCQKKYAIDAPLMEKL 556
Query: 549 DYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHS 608
DYVLSL+RK VK+PVSL LS EQRE LIGLLLGGL +ESDE+RK H+I F+FNENS HS
Sbjct: 557 DYVLSLSRKVVKRPVSLKLSKEQREILIGLLLGGLQMESDEERKNHVIYFEFNENSGAHS 616
Query: 609 VLRRYLYDQYHEWLHPSFK--------------------------FWPKGRLVIPKLIHR 642
VLRR++++QYHEWL+ S K FWP+GR +IPKLIHR
Sbjct: 617 VLRRHIHEQYHEWLNSSSKLSDDNDDVPYKFSTISHSYFGFYADQFWPRGRPMIPKLIHR 676
Query: 643 WLTPRALAYWFMYGGHRTSVGDILLKLKVSSEGIALVFKTLKARSLDCRVKKKGRVFWIG 702
WL+PR LAYW+MYGGHRTS GDILLKLK S EG+ V +TLKA+S+DCRVK+KG VFWIG
Sbjct: 677 WLSPRVLAYWYMYGGHRTSSGDILLKLKGSREGVEKVVRTLKAQSMDCRVKRKGTVFWIG 736
Query: 703 FLGSNSTLFWKLIEPYVLDELKEDLLNEGSEYRKLDTQNINFDCGSDSDEKASDYSDDD 761
LGSNST FWKLIEPY+LD++K D + G + I+F GSD+DE A+DYSD++
Sbjct: 737 LLGSNSTWFWKLIEPYILDDVK-DFVKAGCQ------NTISFGSGSDTDENAADYSDNE 788
>gi|356519449|ref|XP_003528385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15820-like [Glycine max]
Length = 763
Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/696 (64%), Positives = 552/696 (79%), Gaps = 33/696 (4%)
Query: 86 TAGSEMRHLGEPVVEVIELEELPEQWRRAKLAWLCKELPSHKGGTLVRILNAQKKWLRQE 145
+A +E R L P VEV EL +PE+WRRA++AWLCKELP+HK GTLVRILNAQKKW+ QE
Sbjct: 72 SAEAEARGLRGPEVEVGELSAVPEEWRRARVAWLCKELPAHKAGTLVRILNAQKKWMWQE 131
Query: 146 DGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDD 205
D TY+ VHC+R+RENET F+VY+WMMQ++WYRFDFALATKLADYMGKE KF+KCR++FDD
Sbjct: 132 DATYVLVHCLRVRENETAFKVYKWMMQRNWYRFDFALATKLADYMGKEGKFSKCREVFDD 191
Query: 206 IINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV 265
IINQGRVPSE TFHIL+VAYLSAPVQGCLDEACSIYNRMIQLGGYQPR S+HNS+F+ALV
Sbjct: 192 IINQGRVPSESTFHILVVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRLSIHNSVFKALV 251
Query: 266 SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
S PG LSK YL+QAEFI+H+L+T+GL++ K+IY GLIWLHSYQD+IDKERI+ L++ M +
Sbjct: 252 SNPGILSKNYLKQAEFIYHHLVTTGLDVHKEIYGGLIWLHSYQDSIDKERIAELREAMLR 311
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMK 385
AGFEE +EVLLS+LR CA+EG+VE+AEK+W++LLE +N P AFVYKME Y+K+G MK
Sbjct: 312 AGFEEDREVLLSILRACAREGEVEEAEKSWVKLLEFENDPPALAFVYKMEVYSKVGMPMK 371
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
SL+IFREMQ +LG V AY++IIE+LCKA+E+EL ES+M +FV++ +KPL PSY+ L +
Sbjct: 372 SLDIFREMQSKLGRTDVAAYNQIIEILCKAQESELAESIMADFVKSDLKPLTPSYVYLLS 431
Query: 446 MYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV 505
MY NL +HD+L +F +CLEKCRPN IY IYL SL GNI+KAE+IFN M+ D TIGV
Sbjct: 432 MYFNLELHDKLEESFYKCLEKCRPNCAIYSIYLNSLVKIGNIDKAEDIFNQMNHDATIGV 491
Query: 506 NTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSL 565
N RSCNIILS YLSSG +KAEK+YD MCLKKYEIES+ ME+LDY+LSL RK VK+P+S+
Sbjct: 492 NARSCNIILSGYLSSGKHLKAEKVYDFMCLKKYEIESSLMEQLDYILSLKRKVVKRPISM 551
Query: 566 NLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEWLHPS 625
LS EQRE +IGLLLGGL I+SD++R+ H+IRF F+ NS H VL+ ++Y + EWLHP+
Sbjct: 552 KLSKEQREIMIGLLLGGLRIDSDDRRRNHIIRFDFDGNSGSHYVLKSHIYHLFFEWLHPT 611
Query: 626 FK--------------------------FWPKGRLVIPKLIHRWLTPRALAYWFMYGGHR 659
K FW KG IPKL+HRWL+P LAYW+MYGGHR
Sbjct: 612 CKPGDNSENIPDKFCTIASSHFGFYADQFWSKGEPSIPKLVHRWLSPCVLAYWYMYGGHR 671
Query: 660 TSVGDILLKLKVSSEGIALVFKTLKARSLDCRVKKKGRVFWIGFLGSNSTLFWKLIEPYV 719
S GDILLK+K S EG+ + + K S+DC+VK+KGRVFWIG LGSNST FWKL+EPYV
Sbjct: 672 NSSGDILLKVKGSREGVENIVRKFKGMSMDCKVKRKGRVFWIGILGSNSTWFWKLVEPYV 731
Query: 720 LDELKEDLLNEGSEYRKLD---TQNINFDCGSDSDE 752
++ +D G E ++ D T++INF+ SDSDE
Sbjct: 732 IE--NKDFAEAGDETKEQDAKETEDINFN--SDSDE 763
>gi|356577031|ref|XP_003556633.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15820-like [Glycine max]
Length = 737
Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/683 (65%), Positives = 552/683 (80%), Gaps = 33/683 (4%)
Query: 99 VEVIELEELPEQWRRAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIR 158
+EV+EL +PE+WRRA++AWLCKELP+HK GTLVRILNAQKKW+RQED TY+ VHC+R+R
Sbjct: 59 MEVLELSAVPEEWRRARVAWLCKELPAHKAGTLVRILNAQKKWMRQEDATYVLVHCLRVR 118
Query: 159 ENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTF 218
ENET F+VY+WMMQ++WYRFDFALATKLADYMGKERKF+KCR++FDDIINQGRVPSE TF
Sbjct: 119 ENETAFKVYKWMMQRNWYRFDFALATKLADYMGKERKFSKCREVFDDIINQGRVPSESTF 178
Query: 219 HILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQ 278
HIL+VAYLSAPVQGCLDEACSIYNRMIQLGGYQPR SLH+SLF+ALVS PG LSK YL+Q
Sbjct: 179 HILVVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRLSLHSSLFKALVSNPGILSKNYLKQ 238
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
AEFI+H+L+T+GL++ K+IY GLIWLHSYQD+IDKERI+ L++ M +AGFEE +EVLLS+
Sbjct: 239 AEFIYHHLVTTGLDVHKEIYGGLIWLHSYQDSIDKERIAELREAMLRAGFEEDREVLLSI 298
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
LR CA+EG+V++AEKTW++LL+ ++ P AFVYKME Y+K+G MKSL+IFREMQ +LG
Sbjct: 299 LRACAREGEVDEAEKTWVKLLKFESEPPALAFVYKMEVYSKVGMPMKSLDIFREMQSKLG 358
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
V AY++IIE+LCKA+E+EL ES+M++FV +G+KP+ PSY+ L +MY L +HD+L
Sbjct: 359 RTDVAAYNQIIEILCKAQESELAESIMEDFVRSGLKPVTPSYVYLLSMYFTLELHDKLEE 418
Query: 459 AFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
AF +CLEKCRPN T+Y IYL SL GNI+KAE+IFN M+ D TIGVN RSCNIILS YL
Sbjct: 419 AFYQCLEKCRPNCTLYSIYLNSLVKIGNIDKAEDIFNQMNRDATIGVNARSCNIILSGYL 478
Query: 519 SSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIGL 578
SSG+ +KAEK+YD MCLKKYEI+S MEKLDY+LSL RK VK+P+SL LS EQRE LIGL
Sbjct: 479 SSGNHLKAEKVYDFMCLKKYEIKSPLMEKLDYILSLKRKVVKRPISLKLSKEQREILIGL 538
Query: 579 LLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEWLHPSFK----------- 627
LLGGL I+SD++R+ H+IRF F+ NS H VL+ ++Y Q++EWLHP+ K
Sbjct: 539 LLGGLQIDSDDQRRNHIIRFDFDRNSGSHYVLKSHIYHQFYEWLHPTCKPGDNSENIPDK 598
Query: 628 ---------------FWPKGRLVIPKLIHRWLTPRALAYWFMYGGHRTSVGDILLKLKVS 672
FW KG IPKL+HRWL+P LAYW+MYGGHR S GDILLK+K S
Sbjct: 599 FCTIASSHFGFYADQFWSKGEPTIPKLVHRWLSPCVLAYWYMYGGHRNSSGDILLKIKGS 658
Query: 673 SEGIALVFKTLKARSLDCRVKKKGRVFWIGFLGSNSTLFWKLIEPYVLDELKEDLLNEGS 732
EG+ + + KA S+DC+VK+KGRVFWIG LGSNST FWKL+EPY+ ++ E+ G
Sbjct: 659 REGVENIVRKFKAMSMDCKVKRKGRVFWIGILGSNSTWFWKLVEPYIKED--EEFSEAGD 716
Query: 733 EYRKLD---TQNINFDCGSDSDE 752
E ++ D T++INF+ SDSDE
Sbjct: 717 ETKEQDTEKTEDINFN--SDSDE 737
>gi|449468730|ref|XP_004152074.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15820-like [Cucumis sativus]
Length = 797
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/771 (59%), Positives = 579/771 (75%), Gaps = 49/771 (6%)
Query: 21 SFFPHVTTVRTPRSYHFLSAPLSSATSQSTFVEQLAGEKDSSQEEKWDMFKNSDAESGSV 80
+ F +V+ P+ P A + +FV+QL + DS E + + +
Sbjct: 41 TLFLPAYSVKVPQ------LPRIRAFASGSFVKQLVYDHDSPSESEEHLSSSFSNGGDGF 94
Query: 81 DFDVGTAGSEMRHLGEPVVEVIELEELPEQWRRAKLAWLCKELPSHKGGTLVRILNAQKK 140
F+ G A +++HLG PV+EV EL+ELPEQWRR+K+AWLCKELP+ K GT++R+LNAQKK
Sbjct: 95 HFENGFASVDLKHLGTPVLEVKELDELPEQWRRSKVAWLCKELPAQKPGTVIRLLNAQKK 154
Query: 141 WLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCR 200
W+ Q+D TYL VHC+RIRENET FRVY+WMMQQHWYRFD+AL+TKLADYMGKERKF+KCR
Sbjct: 155 WMGQDDATYLTVHCLRIRENETAFRVYKWMMQQHWYRFDYALSTKLADYMGKERKFSKCR 214
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
++FDDIINQG VPSE TFHILIVAYLSAPVQGC++EA +IYNRMIQLGGYQPR SLH+SL
Sbjct: 215 EVFDDIINQGCVPSESTFHILIVAYLSAPVQGCIEEASTIYNRMIQLGGYQPRLSLHSSL 274
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
FRALVSKPG LSK++L+QAEFI+HNL+TSGLE+ KD+Y GLIWLHSYQD ID+ERI L+
Sbjct: 275 FRALVSKPGDLSKHHLKQAEFIYHNLVTSGLELHKDMYGGLIWLHSYQDTIDRERIVSLR 334
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
KEMQQAG +E +EVLLS+LR +K GDV +AEK W L D +P+ AFVYKME YAK+
Sbjct: 335 KEMQQAGIKEEREVLLSILRASSKMGDVMEAEKLWQELKYLDGNMPSQAFVYKMEVYAKM 394
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G+ MK+LEIFREM E+L S + AY II +LCK + EL ES+M F+E+ +KPL P+Y
Sbjct: 395 GKPMKALEIFREM-EQLNSTNAAAYQTIIGILCKFQVIELAESIMAGFIESNLKPLTPAY 453
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
++L NM+ NL + D+L L FS+CLEKC+PNRTIY IYL+SL GN+++AEEIF+ M ++
Sbjct: 454 VDLMNMFFNLNLDDKLELTFSQCLEKCKPNRTIYSIYLDSLVKVGNLDRAEEIFSQMETN 513
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVK 560
IG+N RSCNIIL YL G+++KAEKIYDLMC K+Y+I+ MEKL+Y+LSL+RKEVK
Sbjct: 514 GEIGINARSCNIILRGYLLCGNYMKAEKIYDLMCQKRYDIDPPLMEKLEYILSLSRKEVK 573
Query: 561 KPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHE 620
KP+SL LS EQRE L+GLLLGGL IESD++RK H I+F+F+ N + HSVLRR++Y+QYH+
Sbjct: 574 KPMSLKLSKEQREILVGLLLGGLEIESDDERKNHRIQFEFHRNCKTHSVLRRHIYEQYHK 633
Query: 621 WLHPSFK--------------------------FWPKGRLVIPKLIHRWLTPRALAYWFM 654
WLH + K FWP+GR IP LIHRWL+PR LAYW+M
Sbjct: 634 WLHSASKLTDGDVDIPYKFCTVSHSYFGFYADQFWPRGRRAIPNLIHRWLSPRVLAYWYM 693
Query: 655 YGGHRTSVGDILLKLKVSSEGIALVFKTLKARSLDCRVKKKGRVFWIGFLGSNSTLFWKL 714
YGG RTS GDILLKLK S EG+ + K+L+ +S+ C+VK+KG ++WIG LGSN+T FWKL
Sbjct: 694 YGGCRTSSGDILLKLKGSHEGVEKIVKSLREKSIHCKVKRKGNMYWIGLLGSNATWFWKL 753
Query: 715 IEPYVLDELKE----DLLN-----EGSEYRKLDTQNINFDCGSDSDEKASD 756
IEP++LD LKE D LN GSE NINFD SDS E+ S+
Sbjct: 754 IEPFILDYLKESTQADSLNLVGVLNGSE-------NINFDSESDSVEETSN 797
>gi|449528187|ref|XP_004171087.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15820-like, partial [Cucumis sativus]
Length = 747
Score = 910 bits (2353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/741 (61%), Positives = 568/741 (76%), Gaps = 43/741 (5%)
Query: 51 FVEQLAGEKDSSQEEKWDMFKNSDAESGSVDFDVGTAGSEMRHLGEPVVEVIELEELPEQ 110
FV+QL + DS E + + + F+ G A +++HLG PV+EV EL+ELPEQ
Sbjct: 15 FVKQLVYDHDSPSESEEHLSSSFSNGGDGFHFENGFASVDLKHLGTPVLEVKELDELPEQ 74
Query: 111 WRRAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWM 170
WRR+K+AWLCKELP+ K GT++R+LNAQKKW+ Q+D TYL VHC+RIRENET FRVY+WM
Sbjct: 75 WRRSKVAWLCKELPAQKPGTVIRLLNAQKKWMGQDDATYLTVHCLRIRENETAFRVYKWM 134
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
MQQHWYRFD+AL+TKLADYMGKERKF+KCR++FDDIINQG VPSE TFHILIVAYLSAPV
Sbjct: 135 MQQHWYRFDYALSTKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAPV 194
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
QGC++EA +IYNRMIQLGGYQPR SLH+SLFRALVSKPG LSK++L+QAEFI+HNL+TSG
Sbjct: 195 QGCVEEASTIYNRMIQLGGYQPRLSLHSSLFRALVSKPGDLSKHHLKQAEFIYHNLVTSG 254
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
LE+ KDIY GLIWLHSYQD ID+ERI L+KEMQQAG +E +EVLLS+LR +K GDV +
Sbjct: 255 LELHKDIYGGLIWLHSYQDTIDRERIVSLRKEMQQAGIKEEREVLLSILRASSKMGDVME 314
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
AEK W L D +P+ AFVYKME YAK+G+ MK+LEIFREM E+L S + AY II
Sbjct: 315 AEKLWQELKYLDGNMPSQAFVYKMEVYAKMGKPMKALEIFREM-EQLNSTNAAAYQTIIG 373
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPN 470
+LCK + EL ES+M F+E+ +KPL P+Y++L NM+ NL + D+L L FS+CLEKC+PN
Sbjct: 374 ILCKFQVIELAESIMAGFIESNLKPLTPAYVDLMNMFFNLNLDDKLELTFSQCLEKCKPN 433
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
RTIY IYL+SL GN+++AEEIF+ M ++ IG+N RSCNIIL YL G+++KAEKIY
Sbjct: 434 RTIYSIYLDSLVKVGNLDRAEEIFSQMETNGEIGINARSCNIILRGYLLCGNYMKAEKIY 493
Query: 531 DLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEK 590
DLMC K+Y+I+ MEKL+Y+LSL+RKEVKKP+SL LS EQRE L+GLLLGGL IESDE+
Sbjct: 494 DLMCQKRYDIDPPLMEKLEYILSLSRKEVKKPMSLKLSKEQREILVGLLLGGLEIESDEE 553
Query: 591 RKRHMIRFQFNENSRMHSVLRRYLYDQYHEWLHPSFK----------------------- 627
RK H I+F+F+ N + HSVLRR++Y+QYH+WLH + K
Sbjct: 554 RKNHRIQFEFHRNCKTHSVLRRHIYEQYHKWLHSASKLTDGDVDIPYKFCTVSHSYFGFY 613
Query: 628 ---FWPKGRLVIPKLIHRWLTPRALAYWFMYGGHRTSVGDILLKLKVSSEGIALVFKTLK 684
FWP+GR IP LIHRWL+PR LAYW+MYGG RTS GDILLKLK S EG+ + K+L+
Sbjct: 614 ADQFWPRGRRAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVKSLR 673
Query: 685 ARSLDCRVKKKGRVFWIGFLGSNSTLFWKLIEPYVLDELKE----DLLN-----EGSEYR 735
+S+ C+VK+KG ++WIG LG+N+T FWKLIEP++LD LKE D LN GSE
Sbjct: 674 EKSIHCKVKRKGNMYWIGLLGTNATWFWKLIEPFILDYLKESTQADSLNLVGVLNGSE-- 731
Query: 736 KLDTQNINFDCGSDSDEKASD 756
NINFD SDS E+ S+
Sbjct: 732 -----NINFDSESDSVEETSN 747
>gi|297836204|ref|XP_002885984.1| hypothetical protein ARALYDRAFT_343169 [Arabidopsis lyrata subsp.
lyrata]
gi|297331824|gb|EFH62243.1| hypothetical protein ARALYDRAFT_343169 [Arabidopsis lyrata subsp.
lyrata]
Length = 841
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/761 (58%), Positives = 570/761 (74%), Gaps = 46/761 (6%)
Query: 22 FFPHVTTVRTPRSYHFLSAPLSSATSQSTFVEQLAGEKDSSQEEKWDMFKNSDAESGSVD 81
FF H +T RTP L S+A TFVE L G +S + S + D
Sbjct: 85 FFSHSST-RTPP----LFTANSAAQRSGTFVEHLTGITESK-----------EGSSEAND 128
Query: 82 F-DVGTAGSEMRHLGEPVVEVIELEEL----PEQWRRAKLAWLCKELPSHKGGTLVRILN 136
F DV +A +++R++ VE PE+WRR+KLAWLCKE+P+HK TLVR+LN
Sbjct: 129 FGDVESARNDIRNVTTRRVETEVEVRELEELPEEWRRSKLAWLCKEVPTHKAVTLVRLLN 188
Query: 137 AQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKF 196
AQKKW+RQED TY+AVHCMRIRENETGFRVY WM QQ+WYRFDF L TKLADY+GKERKF
Sbjct: 189 AQKKWVRQEDATYIAVHCMRIRENETGFRVYRWMTQQNWYRFDFGLVTKLADYLGKERKF 248
Query: 197 AKCRDIFDDIINQGRVPSEMTFHILIVAYLSA-PVQGCLDEACSIYNRMIQLGGYQPRPS 255
KCR++FDDI+NQGRVPSE TFHIL+VAYLS+ V+GCL+EACS+YNRMIQLGGY+PR S
Sbjct: 249 TKCREVFDDIMNQGRVPSESTFHILVVAYLSSLSVEGCLEEACSVYNRMIQLGGYKPRLS 308
Query: 256 LHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER 315
LHNSLFRAL+SK GG+ L+QAEFIFHN++T+GLE+QKDIYSGLIWLHS Q+ +DK+R
Sbjct: 309 LHNSLFRALISKRGGILNDQLKQAEFIFHNVVTTGLEVQKDIYSGLIWLHSCQEEVDKDR 368
Query: 316 ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME 375
I+ L++EM +AGF+E KEV++S+LR AKEG VE+ E+TWL LL+ D GIP+ AFVYKME
Sbjct: 369 INFLREEMMKAGFQESKEVVVSLLRAYAKEGGVEEVERTWLELLDLDCGIPSQAFVYKME 428
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
AY+K+G+F K+LEIFREM+++LG A+V YHKIIE+LCK ++ E E+L+KEF E+G KP
Sbjct: 429 AYSKVGDFAKALEIFREMEKQLGGATVSGYHKIIEVLCKVQQVEFVETLLKEFEESGKKP 488
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
L+PSYI + MY +LG+H++L +AF ECLEKC+P++TIY IYL+SL GN+EKA ++FN
Sbjct: 489 LLPSYIEIAKMYFDLGLHEKLEMAFVECLEKCQPSQTIYNIYLDSLVKIGNLEKAGDVFN 548
Query: 496 HMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLN 555
M ++ TI VN RSCN +L YL SG V+AE+IYDLM +KKYEIE MEKLDY+LSL
Sbjct: 549 EMKNNGTINVNARSCNNLLKGYLDSGKQVQAERIYDLMRMKKYEIEPLLMEKLDYILSLK 608
Query: 556 RKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLY 615
+KEVKKP+S+ LS EQRE L+GLLLGGL IESD+++K HMIRF+F ENS+ H +L+++++
Sbjct: 609 KKEVKKPLSMKLSKEQREVLVGLLLGGLQIESDKEKKSHMIRFEFRENSQAHLILKQHIH 668
Query: 616 DQYHEWLHP--SFK----------------------FWPKGRLVIPKLIHRWLTPRALAY 651
DQ+ EWLHP +F+ FWPKG+ IP LIHRWL+P +LAY
Sbjct: 669 DQFREWLHPLSNFQEDIIPFEFYSVPHSYFGFYAEHFWPKGQPEIPNLIHRWLSPHSLAY 728
Query: 652 WFMYGGHRTSVGDILLKLKVSSEGIALVFKTLKARSLDCRVKKKGRVFWIGFLGSNSTLF 711
W+MY G +TS GDI+L+LK S EG+ V K L+A+S++CRVKKKG++FWIG G+NS LF
Sbjct: 729 WYMYSGFKTSSGDIILRLKGSLEGVEKVVKALRAKSMECRVKKKGKIFWIGLQGTNSALF 788
Query: 712 WKLIEPYVLDELKEDLLNEGSEYRKLDTQNINFDCGSDSDE 752
W LIEPYVL++LK+ L TQN D +E
Sbjct: 789 WNLIEPYVLEDLKDHLKPPSESIGNASTQNQKLDSTKPVEE 829
>gi|240254458|ref|NP_565382.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546786|sp|Q9XIL5.3|PP154_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g15820
gi|25411674|pir||G84533 hypothetical protein At2g15820 [imported] - Arabidopsis thaliana
gi|330251345|gb|AEC06439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 849
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/773 (58%), Positives = 580/773 (75%), Gaps = 57/773 (7%)
Query: 22 FFPHVTTVRTPRSYHFLSAPLSSATSQSTFVEQLAGEKDSSQEEKWDMFKNSDAESGSVD 81
FF H +T RTP L S+A TFVE L G +S + +E+
Sbjct: 91 FFSHSST-RTPP----LFTANSTAQRSGTFVEHLTGITESEE---------GISEANGFG 136
Query: 82 FDVGTAGSEMRHLG----EPVVEVIELEELPEQWRRAKLAWLCKELPSHKGGTLVRILNA 137
DV +A +++R++ E EV ELEELPE+WRR+KLAWLCKE+P+HK TLVR+LNA
Sbjct: 137 -DVESARNDIRNVATRRIETEFEVRELEELPEEWRRSKLAWLCKEVPTHKAVTLVRLLNA 195
Query: 138 QKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFA 197
QKKW+RQED TY++VHCMRIRENETGFRVY WM QQ+WYRFDF L TKLA+Y+GKERKF
Sbjct: 196 QKKWVRQEDATYISVHCMRIRENETGFRVYRWMTQQNWYRFDFGLTTKLAEYLGKERKFT 255
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSA-PVQGCLDEACSIYNRMIQLGGYQPRPSL 256
KCR++FDD++NQGRVPSE TFHIL+VAYLS+ V+GCL+EACS+YNRMIQLGGY+PR SL
Sbjct: 256 KCREVFDDVLNQGRVPSESTFHILVVAYLSSLSVEGCLEEACSVYNRMIQLGGYKPRLSL 315
Query: 257 HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERI 316
HNSLFRALVSK GG+ L+QAEFIFHN++T+GLE+QKDIYSGLIWLHS QD +D RI
Sbjct: 316 HNSLFRALVSKQGGILNDQLKQAEFIFHNVVTTGLEVQKDIYSGLIWLHSCQDEVDIGRI 375
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEA 376
+ L++EM++AGF+E KEV++S+LR AKEG VE+ E+TWL LL+ D GIP+ AFVYK+EA
Sbjct: 376 NSLREEMKKAGFQESKEVVVSLLRAYAKEGGVEEVERTWLELLDLDCGIPSQAFVYKIEA 435
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
Y+K+G+F K++EIFREM++ +G A++ YHKIIE+LCK ++ EL E+LMKEF E+G KPL
Sbjct: 436 YSKVGDFAKAMEIFREMEKHIGGATMSGYHKIIEVLCKVQQVELVETLMKEFEESGKKPL 495
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+PS+I + MY +LG+H++L +AF +CLEKC+P++ IY IYL+SL GN+EKA ++FN
Sbjct: 496 LPSFIEIAKMYFDLGLHEKLEMAFVQCLEKCQPSQPIYNIYLDSLTKIGNLEKAGDVFNE 555
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNR 556
M ++ TI V+ RSCN +L YL G V+AE+IYDLM +KKYEIE MEKLDY+LSL +
Sbjct: 556 MKNNGTINVSARSCNSLLKGYLDCGKQVQAERIYDLMRMKKYEIEPPLMEKLDYILSLKK 615
Query: 557 KEVKK-PVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLY 615
KEVKK P S+ LS +QRE L+GLLLGGL IESD+++K HMI+F+F ENS+ H VL++ ++
Sbjct: 616 KEVKKRPFSMKLSKDQREVLVGLLLGGLQIESDKEKKSHMIKFEFRENSQAHLVLKQNIH 675
Query: 616 DQYHEWLHP---------SFKF---------------WPKGRLVIPKLIHRWLTPRALAY 651
DQ+ EWLHP F+F WPKG+ IPKLIHRWL+P +LAY
Sbjct: 676 DQFREWLHPLSNFQEDIIPFEFYSVPHSYFGFYAEHYWPKGQPEIPKLIHRWLSPHSLAY 735
Query: 652 WFMYGGHRTSVGDILLKLKVSSEGIALVFKTLKARSLDCRVKKKGRVFWIGFLGSNSTLF 711
W+MY G +TS GDI+L+LK S EG+ V K L+A+S++CRVKKKG+VFWIG G+NS LF
Sbjct: 736 WYMYSGVKTSSGDIILRLKGSLEGVEKVVKALQAKSMECRVKKKGKVFWIGLQGTNSALF 795
Query: 712 WKLIEPYVLDELKEDLLNEGSE----YRKLDTQNINFDCGSDSDEKASDYSDD 760
WKLIEP+VL+ LKE L SE ++ + Q+INF SD+SDD
Sbjct: 796 WKLIEPHVLENLKEH-LKPASESLDNVKEAEEQSINFKSN-------SDHSDD 840
>gi|357436027|ref|XP_003588289.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357469333|ref|XP_003604951.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357520985|ref|XP_003630781.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477337|gb|AES58540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506006|gb|AES87148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524803|gb|AET05257.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 775
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/715 (58%), Positives = 530/715 (74%), Gaps = 44/715 (6%)
Query: 65 EKWDMFKNSDAESGSVDFDVGTA-GSEMRHLGEPVVEVIELEELPEQWRRAKLAWLCKEL 123
E+W + ++ + + F T E R L P VEV EL E+PE WRR+++AWLCKEL
Sbjct: 74 EQWLLHEDLPDNNDNDIFHFSTVEADEKRRLPRPEVEVKELSEVPELWRRSRVAWLCKEL 133
Query: 124 PSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALA 183
P+HK GTL+RILNAQ+KWLRQ+D TY+ +HC+RIRENET FRVY+WMMQ+ WYRFDFAL+
Sbjct: 134 PAHKAGTLIRILNAQRKWLRQDDATYIIMHCLRIRENETAFRVYKWMMQRSWYRFDFALS 193
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T+LADYMGKERKF KCR++FDDIINQGRVPSE TFHILIVAYLS+ VQGCLDEA I+++
Sbjct: 194 TRLADYMGKERKFTKCREVFDDIINQGRVPSESTFHILIVAYLSSSVQGCLDEAFGIFHQ 253
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
MIQLGGYQPR SLHNS+F+AL+S+PG SK YL+QAEFI+H L+T+GL++ KDIY GLIW
Sbjct: 254 MIQLGGYQPRLSLHNSIFKALISEPGNFSKQYLKQAEFIYHRLVTNGLDVHKDIYGGLIW 313
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
LHSYQD+IDKERI L++EM +AG +E + + AEKTW +L + ++
Sbjct: 314 LHSYQDSIDKERIEALRQEMLRAGIDEREGEVEE-------------AEKTWCKLSQFES 360
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
P+ AFVYKME Y+K+G MKSLEIFREM+ +LG SV AY+KIIE+LCKA+E+E ES
Sbjct: 361 NPPSQAFVYKMEVYSKVGMPMKSLEIFREMKLKLGKTSVAAYNKIIEILCKAQESEFAES 420
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKN 483
+M +FV++G+KPL PSY+ L NMY N+ HD+L AFS+CLEKC PN +Y IYL+SL
Sbjct: 421 IMTDFVKSGLKPLTPSYVYLLNMYFNMESHDKLEEAFSQCLEKCHPNSAVYSIYLDSLVK 480
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESA 543
G I+KAE+IF+ M D +IGV+ RSCNIIL+ YL SG+ +KAEKIYDLMC KKYEI++
Sbjct: 481 VGKIDKAEDIFSQMFRDTSIGVSARSCNIILNGYLYSGNHLKAEKIYDLMCQKKYEIDAP 540
Query: 544 WMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNEN 603
MEKL+Y+LSL RK +KKP+S+ L+ EQRE LIG+LLGGL I+SD+K K H+I F F+ N
Sbjct: 541 LMEKLEYILSLRRKTIKKPMSMKLNKEQREILIGMLLGGLQIDSDDKNKNHIIHFNFDGN 600
Query: 604 SRMHSVLRRYLYDQYHEWLHPSFK--------------------------FWPKGRLVIP 637
S H VL+ +++ Q++EWL P+ K FWP G+ IP
Sbjct: 601 SVSHYVLKSHIHRQFYEWLPPTSKPSGDSENIPGKFCTIPSSHFGFYADQFWPNGQPTIP 660
Query: 638 KLIHRWLTPRALAYWFMYGGHRTSVGDILLKLKVSSEGIALVFKTLKARSLDCRVKKKGR 697
KL+HRWL+P LAYW+MYGGHR S GD+LLK+K S EG+ + K KA S+DC+VK KG+
Sbjct: 661 KLVHRWLSPCVLAYWYMYGGHRNSSGDVLLKIKGSREGVENIVKKFKAMSIDCKVKGKGK 720
Query: 698 VFWIGFLGSNSTLFWKLIEPYVLDELKEDLLNEGSEYRKLD---TQNINFDCGSD 749
VFWIG LGSN+T FWKL+EPY+L+++K D G D TQ+INF SD
Sbjct: 721 VFWIGILGSNTTWFWKLVEPYILEDVK-DFSKAGVNTMGQDLTETQDINFSSESD 774
>gi|357438561|ref|XP_003589556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478604|gb|AES59807.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 761
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/715 (57%), Positives = 525/715 (73%), Gaps = 58/715 (8%)
Query: 65 EKWDMFKNSDAESGSVDFDVGTA-GSEMRHLGEPVVEVIELEELPEQWRRAKLAWLCKEL 123
E+W + ++ + + F T E R L P VEV EL E+PE WRR+++AWLCKEL
Sbjct: 74 EQWLLHEDLPDNNDNDIFHFSTVEADEKRRLPRPEVEVKELSEVPELWRRSRVAWLCKEL 133
Query: 124 PSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALA 183
P+HK GTL+RILNAQ+KWLRQ+D TY+ +HC+RIRENET FRVY+WMMQ+ WYRFDFAL+
Sbjct: 134 PAHKAGTLIRILNAQRKWLRQDDATYIIMHCLRIRENETAFRVYKWMMQRSWYRFDFALS 193
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T+LADYMGKERKF KCR++FDDIINQGRVPSE TFHILIVAYLS+ VQGCLDEA I+++
Sbjct: 194 TRLADYMGKERKFTKCREVFDDIINQGRVPSESTFHILIVAYLSSSVQGCLDEAFGIFHQ 253
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
MIQLGGYQPR SLHNS+F+AL+S+PG SK YL+QAEFI+H L+T+GL++ KDIY GLIW
Sbjct: 254 MIQLGGYQPRLSLHNSIFKALISEPGNFSKQYLKQAEFIYHRLVTNGLDVHKDIYGGLIW 313
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
LHSYQD+IDKERI L++EM +AG +E +EVL+S+LR C++EG+VE+AEKTW +L + ++
Sbjct: 314 LHSYQDSIDKERIEALRQEMLRAGIDESQEVLVSILRACSREGEVEEAEKTWCKLSQFES 373
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
P+ AFVYKME Y+K+G MKSLEIFREM+ +LG SV AY+KIIE+LCKA+E+E
Sbjct: 374 NPPSQAFVYKMEVYSKVGMPMKSLEIFREMKLKLGKTSVAAYNKIIEILCKAQESEF--- 430
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKN 483
PL PSY+ L NMY N+ HD+L AFS+CLEKC PN +Y IYL+SL
Sbjct: 431 -----------PLTPSYVYLLNMYFNMESHDKLEEAFSQCLEKCHPNSAVYSIYLDSLVK 479
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESA 543
G I+KAE+IF+ M D +IGV+ RSCNIIL+ YL SG+ +KAEKIYDLMC KKYEI++
Sbjct: 480 VGKIDKAEDIFSQMFRDTSIGVSARSCNIILNGYLYSGNHLKAEKIYDLMCQKKYEIDAP 539
Query: 544 WMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNEN 603
MEKL+Y+LSL RK +KKP+S+ L+ EQRE LIG+LLGGL I+SD+K K H+I F F+ N
Sbjct: 540 LMEKLEYILSLRRKTIKKPMSMKLNKEQREILIGMLLGGLQIDSDDKNKNHIIHFNFDGN 599
Query: 604 SRMHSVLRRYLYDQYHEWLHPSFK--------------------------FWPKGRLVIP 637
S H VL+ +++ Q++EWL P+ K FWP G+ IP
Sbjct: 600 SVSHYVLKSHIHRQFYEWLPPTSKPSGDSENIPGKFCTIPSSHFGFYADQFWPNGQPTIP 659
Query: 638 KLIHRWLTPRALAYWFMYGGHRTSVGDILLKLKVSSEGIALVFKTLKARSLDCRVKKKGR 697
KL+HRWL+P LAYW+MYGGHR S GD+LLK+K S EG+ + KKG+
Sbjct: 660 KLVHRWLSPCVLAYWYMYGGHRNSSGDVLLKIKGSREGVE-------------NIVKKGK 706
Query: 698 VFWIGFLGSNSTLFWKLIEPYVLDELKEDLLNEGSEYRKLD---TQNINFDCGSD 749
VFWIG LGSN+T FWKL+EPY+L+++K D G D TQ+INF SD
Sbjct: 707 VFWIGILGSNTTWFWKLVEPYILEDVK-DFSKAGVNTMGQDLTETQDINFSSESD 760
>gi|357473553|ref|XP_003607061.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355508116|gb|AES89258.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 767
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/688 (59%), Positives = 520/688 (75%), Gaps = 40/688 (5%)
Query: 65 EKWDMFKNSDAESGSVDFDVGTA-GSEMRHLGEPVVEVIELEELPEQWRRAKLAWLCKEL 123
E+W + ++ + + F T E R L P VEV EL E+PE WRR+++AWLCKEL
Sbjct: 74 EQWLLHEDLPDNNDNDIFHFSTVEADEKRRLPRPEVEVKELSEVPELWRRSRVAWLCKEL 133
Query: 124 PSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALA 183
P+HK GTL+RILNAQ+KWLRQ+D TY+ +HC+RIRENET FRVY+WMMQ+ WYRFDFAL+
Sbjct: 134 PAHKAGTLIRILNAQRKWLRQDDATYIIMHCLRIRENETAFRVYKWMMQRSWYRFDFALS 193
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T+LADYMGKERKF KCR++FDDIINQGRVPSE TFHILIVAYLS+ VQGCLDEA I+++
Sbjct: 194 TRLADYMGKERKFTKCREVFDDIINQGRVPSESTFHILIVAYLSSSVQGCLDEAFGIFHQ 253
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
MIQLGGYQPR SLHNS+F+AL+S+PG SK YL+QAEFI+H L+T+GL++ KDIY GLIW
Sbjct: 254 MIQLGGYQPRLSLHNSIFKALISEPGNFSKQYLKQAEFIYHRLVTNGLDVHKDIYGGLIW 313
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
LHSYQD+IDKERI L++EM +AG +E + + AEKTW +L + ++
Sbjct: 314 LHSYQDSIDKERIEALRQEMLRAGIDEREGEVEE-------------AEKTWCKLSQFES 360
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
P+ AFVYKME Y+K+G MKSLEIFREM+ +LG SV AY+KIIE+LCKA+E+E ES
Sbjct: 361 NPPSQAFVYKMEVYSKVGMPMKSLEIFREMKLKLGKTSVAAYNKIIEILCKAQESEFAES 420
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKN 483
+M +FV++G+KPL PSY+ L NMY N+ HD+L AFS+CLEKC PN +Y IYL+SL
Sbjct: 421 IMTDFVKSGLKPLTPSYVYLLNMYFNMESHDKLEEAFSQCLEKCHPNSAVYSIYLDSLVK 480
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESA 543
G I+KAE+IF+ M D +IGV+ RSCNIIL+ YL SG+ +KAEKIYDLMC KKYEI++
Sbjct: 481 VGKIDKAEDIFSQMFRDTSIGVSARSCNIILNGYLYSGNHLKAEKIYDLMCQKKYEIDAP 540
Query: 544 WMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNEN 603
MEKL+Y+LSL RK +KKP+S+ L+ EQRE LIG+LLGGL I+SD+K K H+I F F+ N
Sbjct: 541 LMEKLEYILSLRRKTIKKPMSMKLNKEQREILIGMLLGGLQIDSDDKNKNHIIHFNFDGN 600
Query: 604 SRMHSVLRRYLYDQYHEWLHPSFK--------------------------FWPKGRLVIP 637
S H VL+ +++ Q++EWL P+ K FWP G+ IP
Sbjct: 601 SVSHYVLKSHIHRQFYEWLPPTSKPSGDSENIPGKFCTIPSSHFGFYADQFWPNGQPTIP 660
Query: 638 KLIHRWLTPRALAYWFMYGGHRTSVGDILLKLKVSSEGIALVFKTLKARSLDCRVKKKGR 697
KL+HRWL+P LAYW+MYGGHR S GD+LLK+K S EG+ + K KA S+DC+VK KG+
Sbjct: 661 KLVHRWLSPCVLAYWYMYGGHRNSSGDVLLKIKGSREGVENIVKKFKAMSIDCKVKGKGK 720
Query: 698 VFWIGFLGSNSTLFWKLIEPYVLDELKE 725
VFWIG LGSN+T FWKL+EPY+L+++K+
Sbjct: 721 VFWIGILGSNTTWFWKLVEPYILEDVKD 748
>gi|297599800|ref|NP_001047847.2| Os02g0702000 [Oryza sativa Japonica Group]
gi|41052690|dbj|BAD07548.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125583378|gb|EAZ24309.1| hypothetical protein OsJ_08060 [Oryza sativa Japonica Group]
gi|255671191|dbj|BAF09761.2| Os02g0702000 [Oryza sativa Japonica Group]
gi|372126667|gb|AEX88471.1| PLS [Oryza sativa Japonica Group]
Length = 790
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/685 (53%), Positives = 505/685 (73%), Gaps = 28/685 (4%)
Query: 76 ESGSVDFDVGTAGSEMRHLGEPVVEVIELEELPEQWRRAKLAWLCKELPSHKGGTLVRIL 135
E G + A E + P + V ELEELPEQWRR+++AWLCKELP++K T RIL
Sbjct: 79 EFGLFQGEAWAAADEREAVRSPELVVPELEELPEQWRRSRIAWLCKELPAYKHSTFTRIL 138
Query: 136 NAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERK 195
NAQ+KW+ Q+D TY+AVHC+RIR N+ FRVY WM++QHW+RF+FALAT++AD +G++ K
Sbjct: 139 NAQRKWITQDDATYVAVHCLRIRNNDAAFRVYSWMVRQHWFRFNFALATRVADCLGRDGK 198
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS 255
KCR++F+ ++ QGRVP+E TFHILIVAYLS P CL+EAC+IYN+MIQ+GGY+PR S
Sbjct: 199 VEKCREVFEAMVKQGRVPAESTFHILIVAYLSVPKGRCLEEACTIYNQMIQMGGYKPRLS 258
Query: 256 LHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER 315
LHNSLFRALVSK GG +KY L+QAEF++HN++T+ L++ KD+Y+GLIWLHSYQD ID+ER
Sbjct: 259 LHNSLFRALVSKTGGTAKYNLKQAEFVYHNVVTTNLDVHKDVYAGLIWLHSYQDVIDRER 318
Query: 316 ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME 375
I L+KEM+QAGF+EG +VL+SV+R +KEG+V + E TW +L+S + +P A+V +ME
Sbjct: 319 IIALRKEMKQAGFDEGIDVLVSVMRAFSKEGNVAETEATWHNILQSGSDLPVQAYVCRME 378
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
AYA+ GE MKSL++F+EM+++ +V +YHKIIE++ KA E ++ E LM EF+E+ MK
Sbjct: 379 AYARTGEPMKSLDMFKEMKDKNIPPNVASYHKIIEIMTKALEVDIVEQLMNEFIESDMKH 438
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
LMP++++L MY++L MH++L L F +C+ +CRPNR +Y IYLESL GNIEKAEE+F
Sbjct: 439 LMPAFLDLMYMYMDLDMHEKLELTFLKCIARCRPNRILYTIYLESLVKVGNIEKAEEVFG 498
Query: 496 HMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLN 555
MH++ IG NT+SCNI+L YLS+ D+ KAEK+YD+M KKY++++ +EKL L LN
Sbjct: 499 EMHNNGMIGTNTKSCNIMLRGYLSAEDYQKAEKVYDMMSKKKYDVQADSLEKLQSGLLLN 558
Query: 556 RKEVK-KPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYL 614
+K +K K VS+ L EQRE LIGLLLGG +ES +R H++ FQF E+S HSVLR ++
Sbjct: 559 KKVIKPKTVSMKLDQEQREILIGLLLGGTRMESYAQRGVHIVHFQFQEDSNAHSVLRVHI 618
Query: 615 YDQYHEWL-----------------------HPSF---KFWPKGRLVIPKLIHRWLTPRA 648
++++ EWL H SF +F+ KG+ V+PKLIHRWLTPR
Sbjct: 619 HERFFEWLSSASRSFDDGSKIPYQFSTIPHQHFSFFVDQFFLKGQPVLPKLIHRWLTPRV 678
Query: 649 LAYWFMYGGHRTSVGDILLKLK-VSSEGIALVFKTLKARSLDCRVKKKGRVFWIGFLGSN 707
LAYWFM+GG + GDI+LKL +SEG+ + +L +SL +VK+KGR FWIGF GSN
Sbjct: 679 LAYWFMFGGSKLPSGDIVLKLSGGNSEGVERIVNSLHTQSLTSKVKRKGRFFWIGFQGSN 738
Query: 708 STLFWKLIEPYVLDELKEDLLNEGS 732
+ FW++IEP+VL+ + EGS
Sbjct: 739 AESFWRIIEPHVLNNFASLVTQEGS 763
>gi|284434715|gb|ADB85413.1| putative endonuclease [Phyllostachys edulis]
Length = 787
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/680 (53%), Positives = 487/680 (71%), Gaps = 30/680 (4%)
Query: 109 EQWRRAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYE 168
EQWRR+++AWLCKELP++K T RILNAQ+KWL Q+D TY+AVHC+RIR N+ FRVY
Sbjct: 109 EQWRRSRIAWLCKELPAYKHSTFTRILNAQRKWLTQDDATYVAVHCLRIRNNDAAFRVYS 168
Query: 169 WMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA 228
WM++QHWYRF+FALAT++AD +G+E K KC+++F+ ++ QGRVP+E TFHIL VAYLS
Sbjct: 169 WMVRQHWYRFNFALATRVADCLGREGKVEKCQEVFEAMVKQGRVPAESTFHILTVAYLSV 228
Query: 229 PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
P CL+EAC+IYN+MIQ+GGY PR SLHNSLFR LVSK GG +K+ L+QAEF++H L+T
Sbjct: 229 PGGRCLEEACTIYNQMIQMGGYSPRLSLHNSLFRTLVSKTGGTAKHNLRQAEFVYHKLVT 288
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
+ LE+ KD+Y+GLIWLHSYQD ID+ERI L+KEM++AGF+E +VL+SV+R +KEG+V
Sbjct: 289 TNLEVHKDVYAGLIWLHSYQDVIDRERIIALRKEMKRAGFDECVDVLVSVMRAFSKEGNV 348
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
E+ E TW ++L+S P A+V +MEAYA+ G+ MKSL+IF+EM+E+ +V +YHKI
Sbjct: 349 EETEATWHKVLQSGFEPPAQAYVCRMEAYARTGKPMKSLDIFKEMKEQNIPPNVASYHKI 408
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR 468
IE++ A+E ++TE LM EF E+ MK LMP++++L MYL+L MH+ L FS+CL +CR
Sbjct: 409 IEIMANAQEIDITEQLMDEFAESHMKHLMPAFLDLMYMYLDLDMHEILEQTFSKCLSRCR 468
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
PNR +Y IYLESL GN++KAEE+F MH++ IG N +SCNI+L YLS+ D+ KAEK
Sbjct: 469 PNRILYIIYLESLVRVGNVKKAEEVFGEMHNNGAIGTNAKSCNIMLRGYLSAEDYQKAEK 528
Query: 529 IYDLMCLKKYEIESAWMEKLDYVLSLNRKEVK-KPVSLNLSSEQRENLIGLLLGGLCIES 587
+ D+M K Y++ + +EKL L L++K VK KPVS+ L EQRE LIGLLLGG IES
Sbjct: 529 VCDMMSKKHYDVHTDSLEKLQSGLLLSKKVVKPKPVSMKLDQEQREILIGLLLGGTQIES 588
Query: 588 DEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEWL-----------------------HP 624
+R H++ F+F E S HSVLR ++++++ E L H
Sbjct: 589 YAQRGVHIVHFKFQEYSNAHSVLRVHIHERFFELLPSASRSFDDESKIPYQFSTIPHSHF 648
Query: 625 SF---KFWPKGRLVIPKLIHRWLTPRALAYWFMYGGHRTSVGDILLKLKVSS-EGIALVF 680
SF +F+ KG+ ++PKL+HRWL+PR LAYWFM+GG + GDI+LKL + EG+ +
Sbjct: 649 SFFADQFFLKGQPILPKLVHRWLSPRVLAYWFMFGGFKLPSGDIVLKLSGGNIEGVERIV 708
Query: 681 KTLKARSLDCRVKKKGRVFWIGFLGSNSTLFWKLIEPYVLDELKEDLLNEGSEYRKLDTQ 740
+L A SL RVK+KGR FWIGF GSN+ FWK+IEPYVLD + E S D Q
Sbjct: 709 NSLHAHSLTSRVKRKGRFFWIGFQGSNADSFWKIIEPYVLDSVVGSTTQESSSICSGDDQ 768
Query: 741 NINFDCGSDSDEKASDYSDD 760
+ D SD D + D D
Sbjct: 769 DTETD--SDDDIRRYDTESD 786
>gi|357137172|ref|XP_003570175.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15820-like [Brachypodium distachyon]
Length = 787
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/642 (54%), Positives = 471/642 (73%), Gaps = 29/642 (4%)
Query: 109 EQWRRAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYE 168
EQWRR+++AWLCKELP++K T RILNAQ+KWL Q+D TY+AVHC+RIR N+ FRV+
Sbjct: 109 EQWRRSRIAWLCKELPAYKHSTFTRILNAQRKWLTQDDATYVAVHCLRIRNNDAAFRVFS 168
Query: 169 WMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA 228
WM +Q WYRF+FALAT++AD++G+E K KCR++F+ ++ QGRVP+E TFHIL VAYLS
Sbjct: 169 WMEKQQWYRFNFALATRVADFLGREGKVEKCREMFEAMVKQGRVPAESTFHILTVAYLSM 228
Query: 229 PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
P CL+ AC+IYN+MIQ+GGY+PR SLHNSLFRALVSK GG +K+ L+QAEF++HNL+T
Sbjct: 229 PKGRCLEHACTIYNQMIQMGGYKPRLSLHNSLFRALVSKTGGAAKHNLRQAEFVYHNLVT 288
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
+ LE+ K++Y+GLIWLHSYQD ID++RI L+KEM+QAGF+E +VL+SV+R +KEG V
Sbjct: 289 TNLEVHKEVYAGLIWLHSYQDVIDRDRIIALRKEMKQAGFDESLDVLVSVMRAFSKEGRV 348
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
E+ E+TW ++++ + P A+V +MEAYA+ GE MKSL+IF+EM+ + S +V YHKI
Sbjct: 349 EETEETWHKVIQRGSERPAQAYVCQMEAYARAGEPMKSLDIFKEMKRQSISPNVATYHKI 408
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR 468
IE++ A+E +L E LM EF E+ MK LMP+++ L MYL+L MH++L + FS+CL +CR
Sbjct: 409 IEIMANAKEVDLAEQLMNEFAESDMKHLMPAFLGLMYMYLDLDMHEKLEVTFSKCLARCR 468
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
PNR +Y IYLES+ GN+EKAEE+F MH + TIG N +SCNI+L Y+ + D+ KAEK
Sbjct: 469 PNRIMYTIYLESVVRVGNVEKAEEVFGEMHKNGTIGTNVKSCNIMLRGYIYAEDYQKAEK 528
Query: 529 IYDLMCLKKYEIESAWMEKLDY--VLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIE 586
+YD+MC KKY+I+ +EKL L KPVS+ L EQRE LIGLLLGG IE
Sbjct: 529 VYDMMCKKKYDIQDDLLEKLQTGRRLGKKVVVKPKPVSMKLDLEQREILIGLLLGGTQIE 588
Query: 587 SDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEW-----------------------LH 623
S +R H++ F F E+S HSVLR ++++++ EW LH
Sbjct: 589 SHAQRGVHIVHFLFQEDSDAHSVLRVHIHERFFEWLTSASRSFDDESKIPYQFSTIPHLH 648
Query: 624 PSF---KFWPKGRLVIPKLIHRWLTPRALAYWFMYGGHRTSVGDILLKLK-VSSEGIALV 679
F +F+ KG+ V+PKL+HRWL+ R LAYWFM+GG + GDI+LKL +SEG+ +
Sbjct: 649 FGFFADQFFLKGQPVLPKLVHRWLSARVLAYWFMFGGFKLPSGDIVLKLSGGTSEGVERI 708
Query: 680 FKTLKARSLDCRVKKKGRVFWIGFLGSNSTLFWKLIEPYVLD 721
+L A+SL +VK+KG+ FWIGF G+NS FWK+IEPYVLD
Sbjct: 709 VNSLHAQSLPSKVKRKGKFFWIGFQGTNSDSFWKVIEPYVLD 750
>gi|242066276|ref|XP_002454427.1| hypothetical protein SORBIDRAFT_04g030740 [Sorghum bicolor]
gi|241934258|gb|EES07403.1| hypothetical protein SORBIDRAFT_04g030740 [Sorghum bicolor]
Length = 794
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/657 (53%), Positives = 475/657 (72%), Gaps = 32/657 (4%)
Query: 109 EQWRRAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYE 168
EQWRR+++AWLCKELP++K T RILNAQ+KW+ Q+D TY+AVHC+RIR N+ FRVY
Sbjct: 116 EQWRRSRIAWLCKELPAYKHSTFTRILNAQRKWITQDDATYVAVHCLRIRHNDAAFRVYS 175
Query: 169 WMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA 228
WM++QHWYRF+FALAT++AD + +E K KCR++FD +I QGRVP+E TFHIL+VAYLS
Sbjct: 176 WMVRQHWYRFNFALATRVADCLAREGKVEKCREVFDAMIKQGRVPAESTFHILVVAYLSV 235
Query: 229 PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
CL+EAC+IYN+MIQ+GGY+PR SLHNSLFRALVSK GG +K+ L+QAEF++HN++T
Sbjct: 236 ARGRCLEEACTIYNQMIQMGGYKPRLSLHNSLFRALVSKTGGTAKHNLRQAEFVYHNIVT 295
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
S L + KDIY+GLIWLHSYQD ID++RI L+ EM++AGFEE +VL+S +R +KEGD+
Sbjct: 296 SNLAVHKDIYAGLIWLHSYQDVIDRDRIKALRDEMKRAGFEESTDVLVSWMRAFSKEGDI 355
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
++ E TW LL S +P A++ +ME YA+ GE MKSLEIF+EM+ + +V +YHKI
Sbjct: 356 KETEATWHWLLRSGCELPVQAYICRMELYARSGEPMKSLEIFKEMKNQNIPPNVASYHKI 415
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR 468
IE++ KA E E+ E LM EFVE+ MK LMP++++L +YL+L MH +L F++CL +CR
Sbjct: 416 IEIMAKAREIEIAEKLMDEFVESDMKHLMPAFLDLMYLYLDLDMHHKLEQTFTKCLGRCR 475
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
PNR +Y IYLESL GN+ KAEEIF MH + IG N +SCNI+L YLS+ D++KAE
Sbjct: 476 PNRILYTIYLESLVRIGNVTKAEEIFGEMHKNGMIGTNAKSCNIMLRGYLSAEDYLKAES 535
Query: 529 IYDLMCLKKYEIESAWMEKLDYVLSLN--RKEVKKPVSLNLSSEQRENLIGLLLGGLCIE 586
IY+LMC KKY+I +EKL L N + KPVS+ L EQRE LIGLLLGG IE
Sbjct: 536 IYELMCKKKYDIPVDSLEKLQSGLLSNKKVVKPPKPVSMKLDEEQREILIGLLLGGTQIE 595
Query: 587 SDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEWL---------------------HPS 625
S ++ +++ F+F E+S HSVLR ++++++ EWL H
Sbjct: 596 SHAQKGVYIVNFKFQEDSNAHSVLRVHIHERFFEWLPSACRSLNRESEIPYRFSTIPHAH 655
Query: 626 F-----KFWPKGRLVIPKLIHRWLTPRALAYWFMYGGHRTSVGDILLKLKVSS-EGIALV 679
F +F+ KG+ V+PKL+HRWL+PR LAYWFM+GG R GDI+LK+ + +G+ +
Sbjct: 656 FGFFADQFFQKGQPVLPKLVHRWLSPRVLAYWFMFGGFRLQSGDIVLKVSGGNIDGVERI 715
Query: 680 FKTLKARSLDCRVKKKGRVFWIGFLGSNSTLFWKLIEPYVLDELK---EDLLNEGSE 733
K+L+ +SL C+VK+KGR FWIGF GSN FWK++EPYVLD E+ N GS+
Sbjct: 716 VKSLQTQSLTCKVKRKGRFFWIGFQGSNGDSFWKIVEPYVLDSFASSTEESHNVGSD 772
>gi|224103517|ref|XP_002313087.1| predicted protein [Populus trichocarpa]
gi|222849495|gb|EEE87042.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/541 (63%), Positives = 425/541 (78%), Gaps = 34/541 (6%)
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
MIQLGGY+PR SLHNSLFRALVSKPG ++K++L+QAEFI+HNL+T GLE+QKDIY GLIW
Sbjct: 1 MIQLGGYRPRLSLHNSLFRALVSKPGVIAKHHLKQAEFIYHNLVTCGLELQKDIYGGLIW 60
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
LHSYQD IDKERI+ L++EM+QAG EE +EVL+S+LR CAK+GDVE+AE+TWL+L+ D
Sbjct: 61 LHSYQDTIDKERITSLREEMRQAGVEESQEVLVSILRACAKDGDVEEAERTWLKLVRLDE 120
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
G+ + AFV +ME ++K GE MKS + FREMQE L S +V YHKIIE+LCKAEE EL ES
Sbjct: 121 GLSSHAFVCRMEVFSKAGEPMKSFKTFREMQEVLSSYNVAPYHKIIEVLCKAEEVELAES 180
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKN 483
LM+E V++GMKPL PS+I++ +MYLNL +HD+L AFS CLEKCRPNR++Y IYL+SL
Sbjct: 181 LMQELVQSGMKPLTPSFISIMDMYLNLNLHDKLESAFSACLEKCRPNRSVYMIYLDSLVK 240
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESA 543
GN +KAEEIFNHM +++ IGVN RSCN IL YLSSG VKAE+IYDLMC KKY+I+S+
Sbjct: 241 VGNFDKAEEIFNHMRNNEAIGVNARSCNTILREYLSSGYHVKAERIYDLMCQKKYDIDSS 300
Query: 544 WMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNEN 603
MEKLD VLS +RK ++ +SL LS EQRE L+GL LGGL IESD K+ HMI+F+FN+N
Sbjct: 301 LMEKLDSVLSSSRKVARRRISLKLSKEQREILVGLFLGGLQIESDGKK--HMIQFEFNQN 358
Query: 604 SRMHSVLRRYLYDQYHEWLHPSFK----------------------------FWPKGRLV 635
S MHS+LRR+L+DQYHEWLHPSFK FWP+G+
Sbjct: 359 SIMHSILRRHLHDQYHEWLHPSFKPSDDSDSDDIPWRFCTISHSCFDFYAEQFWPRGQPQ 418
Query: 636 IPKLIHRWLTPRALAYWFMYGGHRTSVGDILLKLKVSSEGIALVFKTLKARSLDCRVKKK 695
+PKLIHRW++P+ LAYW+MYGGHRTS GDI+LKLK S +G+ V KTLK++SLDCRVK+K
Sbjct: 419 LPKLIHRWMSPQVLAYWYMYGGHRTSSGDIVLKLKGSVKGVGRVVKTLKSKSLDCRVKRK 478
Query: 696 GRVFWIGFLGSNSTLFWKLIEPYVLDELKEDLLNEGS---EYRKLDTQNINFDCGSDSDE 752
G+VFWIGFLGS ST FWKL+EPY+LD+LK DLL G E + QN+NFD GSD DE
Sbjct: 479 GKVFWIGFLGSVSTWFWKLVEPYILDDLK-DLLKAGDPTLENYMEELQNMNFDSGSDFDE 537
Query: 753 K 753
+
Sbjct: 538 E 538
>gi|413938429|gb|AFW72980.1| hypothetical protein ZEAMMB73_593295 [Zea mays]
Length = 783
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/670 (52%), Positives = 476/670 (71%), Gaps = 39/670 (5%)
Query: 110 QWRRAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEW 169
QWRR+++AWLCKELP++K T RILNAQ+KW+ Q+D TY+ VHC+RIR N FRVY W
Sbjct: 106 QWRRSRIAWLCKELPAYKHSTFTRILNAQRKWINQDDATYITVHCLRIRHNAAAFRVYSW 165
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
M+QQHWYRF+FALAT++AD + +E K KCR++FD +I QGRVP+E TFHIL+VAYLS
Sbjct: 166 MVQQHWYRFNFALATRVADCLAREGKVEKCREVFDAMIKQGRVPAESTFHILVVAYLSVA 225
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
GCL+EAC+IYN+MIQ+GGY+PR SLHNSLFRALVSK GG +K+ L+QAEF++HN++TS
Sbjct: 226 RGGCLEEACTIYNQMIQMGGYKPRLSLHNSLFRALVSKTGGTAKHNLRQAEFVYHNIVTS 285
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
LE+ KDIY+GLIWLHSYQD ID++RI L+ EM++AGFEE +VL+S++R +KEGD++
Sbjct: 286 NLEVHKDIYAGLIWLHSYQDVIDRDRIKALRDEMKRAGFEESTDVLVSLMRAFSKEGDIK 345
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
+ E TW LL S +P A++ +ME YA+ GE MKSLE+F+EM+ R +V +YHKII
Sbjct: 346 ETEATWHWLLRSGCELPAQAYICRMELYARTGEPMKSLEMFKEMKNRNIPPNVASYHKII 405
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRP 469
E++ KA E E+ E LM EFVE+ MK LMP++++L +YL+L MH++L F++CL +CRP
Sbjct: 406 EIMTKAREIEIAEKLMDEFVESDMKHLMPAFLDLMYLYLDLDMHEKLEHTFTKCLGRCRP 465
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
NR +Y IY+ESL GN+ KAEEIF+ MH + IG N +S NI+L YL + ++ KAE I
Sbjct: 466 NRILYTIYMESLVRIGNVSKAEEIFDEMHKNGMIGTNAKSANILLRGYLLAENYQKAESI 525
Query: 530 YDLMCLKKYEIESAWMEKLDYVL--SLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIES 587
Y+LMC KKY+I +EKL L S + KPVS+ L EQRE LIGLLLGG IES
Sbjct: 526 YELMCKKKYDIPVESLEKLQSGLLSSKKVVKPPKPVSMKLDEEQREILIGLLLGGTQIES 585
Query: 588 DEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEWL---------------------HPSF 626
++ +++ F+F E+S HS LR ++++++ EWL H F
Sbjct: 586 HAQKGVYIVNFKFQEDSHAHSALRVHIHERFFEWLPSACRSLNRESEIPYRFSTIPHAHF 645
Query: 627 -----KFWPKGRLVIPKLIHRWLTPRALAYWFMYGGHRTSVGDILLKLKVS-SEGIALVF 680
+F+ KG+ V+PKL+HRWL+PR LAYWFM GG R GDI+LK+ + G+ +
Sbjct: 646 GFFADQFFQKGQPVLPKLVHRWLSPRVLAYWFMSGGVRLQSGDIVLKVSGGDTGGVERIV 705
Query: 681 KTLKA-RSLDCRVKKKGRVFWIGFLGSNSTLFWKLIEPYVLDELK---EDLLNEGSE--- 733
K+L+A +SL C+VK+KGR FWIGF G N+ FWK++E YVLD E+ N GS+
Sbjct: 706 KSLQAQQSLACKVKRKGRFFWIGFQGCNADSFWKIVETYVLDSFASSTEESHNVGSDGLQ 765
Query: 734 ---YRKLDTQ 740
Y + DTQ
Sbjct: 766 DYTYYESDTQ 775
>gi|218191417|gb|EEC73844.1| hypothetical protein OsI_08598 [Oryza sativa Indica Group]
Length = 873
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 310/631 (49%), Positives = 438/631 (69%), Gaps = 42/631 (6%)
Query: 75 AESGSVDFDVGTAGSEMRHLGEPVVEVIELEELPEQWRRAKLAWLCKELPSHKGGTLVRI 134
E G + A E + P + V +LEELPEQWRR+++AWLCKELP++K T RI
Sbjct: 77 TEFGLFQGEAWAAADEREAVRSPELVVPQLEELPEQWRRSRIAWLCKELPAYKHSTFTRI 136
Query: 135 LNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKER 194
LNAQ+KW+ Q+D TY+AVHC+RIR N+ FRVY WM++QHW+RF+FALAT++AD +G++
Sbjct: 137 LNAQRKWITQDDATYVAVHCLRIRSNDAAFRVYSWMVRQHWFRFNFALATRVADCLGRDG 196
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
K KCR++F+ ++ QGRVP+E TFHILIVAYLS P CL+EAC+IYN+MIQ+GGY+PR
Sbjct: 197 KVEKCREVFEAMVKQGRVPAESTFHILIVAYLSVPKGRCLEEACTIYNQMIQMGGYKPRL 256
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
SLHNSLFRALVSK GG +KY L+QAEF++HN++T+ L++ KD+Y+GLIWLHSYQD ID+E
Sbjct: 257 SLHNSLFRALVSKTGGTAKYNLKQAEFVYHNVVTTNLDVHKDVYAGLIWLHSYQDVIDRE 316
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM 374
RI L+KEM+QAGF+EG +VL A+V +M
Sbjct: 317 RIIALRKEMKQAGFDEGIDVL---------------------------------AYVCRM 343
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
EAYA+ GE MKSL++F+EM+++ +V +YHKIIE++ KA E ++ E LM EF+E+ MK
Sbjct: 344 EAYARTGEPMKSLDMFKEMKDKNIPPNVASYHKIIEIMTKAREVDIVEQLMNEFIESDMK 403
Query: 435 PLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
LMP++++L MY++L MH++L L F +C+ +CRPNR +Y IYLESL GNIEKAEE+F
Sbjct: 404 HLMPAFLDLMYMYMDLDMHEKLELTFLKCIARCRPNRILYTIYLESLVKVGNIEKAEEVF 463
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSL 554
MH++ IG NT+SCNI+L YLS+ D+ KAEK+YD+M KKY++++ +EKL L L
Sbjct: 464 GEMHNNGMIGTNTKSCNIMLRGYLSAEDYQKAEKVYDMMSKKKYDVQADSLEKLQSGLLL 523
Query: 555 NRKEVK-KPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRY 613
N+K +K K VS+ L EQRE LIGLLLGG +ES +R H++ FQF E+S HSVLR +
Sbjct: 524 NKKVIKPKTVSMKLDQEQREILIGLLLGGTRMESYAQRGVHIVHFQFQEDSNAHSVLRVH 583
Query: 614 LYDQYHEWLHPSFKFWPKGRLVIPKLIHRWLTPRALAYWFMYGGHRTSVGDILLKLKVSS 673
+++++ EWL + + + G K+ +++ T + F + G +L KL+
Sbjct: 584 IHERFFEWLSSASRSFDDGS----KIPYQFSTIPHQHFSF-FADQFFLKGRLLEKLQ--- 635
Query: 674 EGIALVFKTLKARSLDCRVKKKGRVFWIGFL 704
G+ L K +K +++ ++ ++ R IG L
Sbjct: 636 SGLLLNKKVIKPKTVSMKLDQEQREILIGLL 666
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 137/216 (63%), Gaps = 28/216 (12%)
Query: 545 MEKLDYVLSLNRKEVK-KPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNEN 603
+EKL L LN+K +K K VS+ L EQRE LIGLLLGG +ES +R H++ FQF E+
Sbjct: 631 LEKLQSGLLLNKKVIKPKTVSMKLDQEQREILIGLLLGGTRMESYAQRGVHIVHFQFQED 690
Query: 604 SRMHSVLRRYLYDQYHEWL-----------------------HPSF---KFWPKGRLVIP 637
S HSVLR ++++++ EWL H SF +F+ KG+ V+P
Sbjct: 691 SNAHSVLRVHIHERFFEWLSSASRSFDDGSKIPYQFSTIPHQHFSFFADQFFLKGQPVLP 750
Query: 638 KLIHRWLTPRALAYWFMYGGHRTSVGDILLKLKV-SSEGIALVFKTLKARSLDCRVKKKG 696
KLIHRWLTPR LAYWFM+GG + GDI+LKL +SEG+ + +L +SL +VK+KG
Sbjct: 751 KLIHRWLTPRVLAYWFMFGGSKLPSGDIVLKLSGGNSEGVERIVNSLHTQSLTSKVKRKG 810
Query: 697 RVFWIGFLGSNSTLFWKLIEPYVLDELKEDLLNEGS 732
R FWIGF GSN+ FW++IEP+VL+ + EGS
Sbjct: 811 RFFWIGFQGSNAESFWRIIEPHVLNNFASLVTQEGS 846
>gi|15810471|gb|AAL07123.1| unknown protein [Arabidopsis thaliana]
Length = 547
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 314/546 (57%), Positives = 413/546 (75%), Gaps = 37/546 (6%)
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
MIQLGGY+PR SLHNSLFRALVSK GG+ L+QAEFIFHN++T+GLE+QKDIYSGLIW
Sbjct: 1 MIQLGGYKPRLSLHNSLFRALVSKQGGILNDQLKQAEFIFHNVVTTGLEVQKDIYSGLIW 60
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
LHS QD +D RI+ L++EM++AGF+E KEV++S+LR AKEG VE+ E+TWL LL+ D
Sbjct: 61 LHSCQDEVDIGRINSLREEMKKAGFQESKEVVVSLLRAYAKEGGVEEVERTWLELLDLDC 120
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
GIP+ AFVYK+EAY+K+G+F K++EIFREM++++G A++ YHKIIE+LCK ++ EL E+
Sbjct: 121 GIPSQAFVYKIEAYSKVGDFAKAMEIFREMEKQIGGATMSGYHKIIEVLCKVQQVELVET 180
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKN 483
LMKEF E+G KPL+PS+I + MY +LG+H++L +AF +CLEKC+P++ IY IYL+SL
Sbjct: 181 LMKEFEESGKKPLLPSFIEIAKMYFDLGLHEKLEMAFVQCLEKCQPSQPIYNIYLDSLTK 240
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESA 543
GN+EKA ++FN M ++ TI V+ RSCN +L YL G V+AE+IYDLM +KKYEIE
Sbjct: 241 IGNLEKAGDVFNEMKNNGTINVSARSCNSLLKGYLDCGKQVQAERIYDLMRMKKYEIEPP 300
Query: 544 WMEKLDYVLSLNRKEVKK-PVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNE 602
MEKLDY+LSL +KEVKK P S+ LS +QRE L+GLLLGGL IESD+++K HMI+F+F E
Sbjct: 301 LMEKLDYILSLKKKEVKKRPFSMKLSKDQREVLVGLLLGGLQIESDKEKKSHMIKFEFRE 360
Query: 603 NSRMHSVLRRYLYDQYHEWLHP---------SFKF---------------WPKGRLVIPK 638
NS+ H VL++ ++DQ+ EWLHP F+F WPKG+ IPK
Sbjct: 361 NSQAHLVLKQNIHDQFREWLHPLSNFQEDIIPFEFYSVPHSYFGFYAEHYWPKGQPEIPK 420
Query: 639 LIHRWLTPRALAYWFMYGGHRTSVGDILLKLKVSSEGIALVFKTLKARSLDCRVKKKGRV 698
LIHRWL+P +LAYW+MY G +TS GDI+L+LK S EG+ V K L+A+S++CRVKKKG+V
Sbjct: 421 LIHRWLSPHSLAYWYMYSGVKTSSGDIILRLKGSLEGVEKVVKALQAKSMECRVKKKGKV 480
Query: 699 FWIGFLGSNSTLFWKLIEPYVLDELKEDLLNEGSE----YRKLDTQNINFDCGSDSDEKA 754
FWIG G+NS LFWKLIEP+VL+ LKE L SE ++ + Q+INF
Sbjct: 481 FWIGLQGTNSALFWKLIEPHVLENLKEH-LKPASESLDNVKEAEEQSINFKSN------- 532
Query: 755 SDYSDD 760
SD+SDD
Sbjct: 533 SDHSDD 538
>gi|20197803|gb|AAD41982.2| expressed protein [Arabidopsis thaliana]
gi|58652068|gb|AAW80859.1| At2g15820 [Arabidopsis thaliana]
Length = 547
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 314/546 (57%), Positives = 412/546 (75%), Gaps = 37/546 (6%)
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
MIQLGGY+PR SLHNSLFRALVSK GG+ L+QAEFIFHN++T+GLE+QKDIYSGLIW
Sbjct: 1 MIQLGGYKPRLSLHNSLFRALVSKQGGILNDQLKQAEFIFHNVVTTGLEVQKDIYSGLIW 60
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
LHS QD +D RI+ L++EM++AGF+E KEV++S+LR AKEG VE+ E+TWL LL+ D
Sbjct: 61 LHSCQDEVDIGRINSLREEMKKAGFQESKEVVVSLLRAYAKEGGVEEVERTWLELLDLDC 120
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
GIP+ AFVYK+EAY+K+G+F K++EIFREM++ +G A++ YHKIIE+LCK ++ EL E+
Sbjct: 121 GIPSQAFVYKIEAYSKVGDFAKAMEIFREMEKHIGGATMSGYHKIIEVLCKVQQVELVET 180
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKN 483
LMKEF E+G KPL+PS+I + MY +LG+H++L +AF +CLEKC+P++ IY IYL+SL
Sbjct: 181 LMKEFEESGKKPLLPSFIEIAKMYFDLGLHEKLEMAFVQCLEKCQPSQPIYNIYLDSLTK 240
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESA 543
GN+EKA ++FN M ++ TI V+ RSCN +L YL G V+AE+IYDLM +KKYEIE
Sbjct: 241 IGNLEKAGDVFNEMKNNGTINVSARSCNSLLKGYLDCGKQVQAERIYDLMRMKKYEIEPP 300
Query: 544 WMEKLDYVLSLNRKEVKK-PVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNE 602
MEKLDY+LSL +KEVKK P S+ LS +QRE L+GLLLGGL IESD+++K HMI+F+F E
Sbjct: 301 LMEKLDYILSLKKKEVKKRPFSMKLSKDQREVLVGLLLGGLQIESDKEKKSHMIKFEFRE 360
Query: 603 NSRMHSVLRRYLYDQYHEWLHP---------SFKF---------------WPKGRLVIPK 638
NS+ H VL++ ++DQ+ EWLHP F+F WPKG+ IPK
Sbjct: 361 NSQAHLVLKQNIHDQFREWLHPLSNFQEDIIPFEFYSVPHSYFGFYAEHYWPKGQPEIPK 420
Query: 639 LIHRWLTPRALAYWFMYGGHRTSVGDILLKLKVSSEGIALVFKTLKARSLDCRVKKKGRV 698
LIHRWL+P +LAYW+MY G +TS GDI+L+LK S EG+ V K L+A+S++CRVKKKG+V
Sbjct: 421 LIHRWLSPHSLAYWYMYSGVKTSSGDIILRLKGSLEGVEKVVKALQAKSMECRVKKKGKV 480
Query: 699 FWIGFLGSNSTLFWKLIEPYVLDELKEDLLNEGSE----YRKLDTQNINFDCGSDSDEKA 754
FWIG G+NS LFWKLIEP+VL+ LKE L SE ++ + Q+INF
Sbjct: 481 FWIGLQGTNSALFWKLIEPHVLENLKEH-LKPASESLDNVKEAEEQSINFKSN------- 532
Query: 755 SDYSDD 760
SD+SDD
Sbjct: 533 SDHSDD 538
>gi|110739799|dbj|BAF01806.1| hypothetical protein [Arabidopsis thaliana]
Length = 495
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 275/494 (55%), Positives = 366/494 (74%), Gaps = 37/494 (7%)
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
DIYSGLIWLHS QD +D RI+ L++EM++AGF+E KEV++S+LR AKEG VE+ E+TW
Sbjct: 1 DIYSGLIWLHSCQDEVDIGRINSLREEMKKAGFQESKEVVVSLLRAYAKEGGVEEVERTW 60
Query: 356 LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
L LL+ D GIP+ AFVYK+EAY+K+G+F K++EIFREM++ +G A++ YHKIIE+LCK
Sbjct: 61 LELLDLDCGIPSQAFVYKIEAYSKVGDFAKAMEIFREMEKHIGGATMSGYHKIIEVLCKV 120
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYG 475
++ EL E+LMKEF E+G KPL+PS+I + MY +LG+H++L +AF +CLEKC+P++ IY
Sbjct: 121 QQVELVETLMKEFEESGKKPLLPSFIEIAKMYFDLGLHEKLEMAFVQCLEKCQPSQPIYN 180
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCL 535
IYL+SL GN+EKA ++FN M ++ TI V+ RSCN +L YL G V+AE+IYDLM +
Sbjct: 181 IYLDSLTKIGNLEKAGDVFNEMKNNGTINVSARSCNSLLKGYLDCGKQVQAERIYDLMRM 240
Query: 536 KKYEIESAWMEKLDYVLSLNRKEVKK-PVSLNLSSEQRENLIGLLLGGLCIESDEKRKRH 594
KKYEIE MEKLDY+LSL +KEVKK P S+ LS +QRE L+GLLLGGL IESD+++K H
Sbjct: 241 KKYEIEPPLMEKLDYILSLKKKEVKKRPFSMKLSKDQREVLVGLLLGGLQIESDKEKKSH 300
Query: 595 MIRFQFNENSRMHSVLRRYLYDQYHEWLHP---------SFKF---------------WP 630
MI+F+F ENS+ H VL++ ++DQ+ EWLHP F+F WP
Sbjct: 301 MIKFEFRENSQAHLVLKQNIHDQFREWLHPLSNFQEDIIPFEFYSVPHSYFGFYAEHYWP 360
Query: 631 KGRLVIPKLIHRWLTPRALAYWFMYGGHRTSVGDILLKLKVSSEGIALVFKTLKARSLDC 690
KG+ IPKLIHRWL+P +LAYW+MY G +TS GDI+L+LK S EG+ V K L+A+S++C
Sbjct: 361 KGQPEIPKLIHRWLSPHSLAYWYMYSGVKTSSGDIILRLKGSLEGVEKVVKALQAKSMEC 420
Query: 691 RVKKKGRVFWIGFLGSNSTLFWKLIEPYVLDELKEDLLNEGSE----YRKLDTQNINFDC 746
RVKKKG+VFWIG G+NS LFWKLIEP+VL+ LKE L SE ++ + Q+INF
Sbjct: 421 RVKKKGKVFWIGLQGTNSALFWKLIEPHVLENLKEH-LKPASESLDNVKEAEEQSINFKS 479
Query: 747 GSDSDEKASDYSDD 760
SD+SDD
Sbjct: 480 N-------SDHSDD 486
>gi|168042752|ref|XP_001773851.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674838|gb|EDQ61341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 201/652 (30%), Positives = 330/652 (50%), Gaps = 42/652 (6%)
Query: 109 EQWRRAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYE 168
E WR K+ WLC+E+P+ + +V +LN+Q+ W++ D + MR E RV +
Sbjct: 1 EDWRPKKIGWLCREIPALRPTAIVTLLNSQRAWIKAVDTKEVIETLMRRGEILRAHRVLK 60
Query: 169 WMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA 228
W MQQ WY DF L TK+A+ +G K + R++FD II G++P T+ IL+ AY++
Sbjct: 61 WTMQQPWYENDFDLNTKMANMLGTNGKLTRMRELFDIIIATGQIPDISTYVILVKAYIAD 120
Query: 229 PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
L++A ++YN+M QLGGYQ +L +LF+A + GG L +A+ + ++
Sbjct: 121 ESGESLEQAFAMYNQMEQLGGYQQPAALAYALFQAFTDRKGGAHLRNLHKADALLESMRK 180
Query: 289 SG----LEIQKD----IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
G + + + I++GLI +HS Q N+ ER+ L M+ A F ++ +++R
Sbjct: 181 KGDVWCMGLPSNQWSGIFTGLIHMHSIQGNV--ERVHELVAAMKDAAFPLSRDCYSALIR 238
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
VCAK+ + +AE+ + LL + + A+ +E Y G K F EM E+
Sbjct: 239 VCAKDRNTTEAERVFEDLLAAGHEPDWRAYAALIETYGSAGLPEKVQSTFNEMVEKGIQI 298
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
+V + +IE + KAE E S +++ E L SY L Y + M + F
Sbjct: 299 TVNVHQAVIEAMVKAESKEGALSALEKAEENFSAVLHNSYNLLMEWYKSKDMLLEVQEIF 358
Query: 461 SECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
+ +KCRPN Y ++S G +++AE IF M + N ++ +++ A+
Sbjct: 359 NRMKGKKCRPNLQAYNNLIDSHILRGQLDEAEAIFEDMKKLEGFHPNLKTFCLMIEAFFR 418
Query: 520 SGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNR--KEVKKPVSLNLSSEQRENLIG 577
+ + K + Y + +K M K+ VL + V L SEQRE L+G
Sbjct: 419 AERYEKVKDCYTYLTARKMMPPEEIMVKVAGVLGKTNVADQANGKVKRKLVSEQREILVG 478
Query: 578 LLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEWL--------------- 622
+LLGG I S + + + + F+ + + VL +LYD + +W
Sbjct: 479 VLLGGAKITSHDNNRTYEVGFELTDATEAGPVLIDHLYDIFADWAQQAPRTEVNDDSRKT 538
Query: 623 -------HPSFKFW-----PKGRLVIPKLIHRWLTPRALAYWFMYGGHRT--SVGDILLK 668
H S +F+ P+G VIP+LIHRWL P +LAYW+MYGG + + G +L
Sbjct: 539 YRFSTVSHGSLRFYAHQYRPEGLPVIPRLIHRWLNPLSLAYWYMYGGEKCKETGGIVLNA 598
Query: 669 LKVSSEGIALVFKTLKARSLDCRVKKKGRVFWIGFLGSNSTLFWKLIEPYVL 720
+ +S+ + LV K LKAR++DC ++++ I F ++ WKL+EP++L
Sbjct: 599 CQYTSKELTLVVKALKARTVDCVIRRRKAGNVICFKDESAVWIWKLMEPHIL 650
>gi|167999450|ref|XP_001752430.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696330|gb|EDQ82669.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 714
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 205/661 (31%), Positives = 338/661 (51%), Gaps = 45/661 (6%)
Query: 109 EQWRRAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYE 168
E WRR K+ WLCKE+P+ + G +V +LN+Q+KW++ D + MR E +RV +
Sbjct: 1 EVWRRKKIGWLCKEIPALRPGGIVTMLNSQRKWIKAVDAKEVVETLMRRDEILRAYRVLK 60
Query: 169 WMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA 228
W MQQ WY DF L TK+ + +G + K + R++FD II G VP T+ ILI A ++
Sbjct: 61 WTMQQPWYENDFDLNTKMVNTLGTKGKLMRMRELFDTIIATGAVPDISTYIILIKADIAD 120
Query: 229 PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHN--- 285
LD A +IYN+M QLGGYQ +L +L +A + G L +A+ +F N
Sbjct: 121 GSGDSLDHAFAIYNQMEQLGGYQQPAALAYTLSQAFTDRKGATHIRNLLKADALFENMRK 180
Query: 286 ---LLTSGLEIQK--DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
L GL + I+SG+I +HS+Q N+ R+ L +M++A ++ +++R
Sbjct: 181 KSVLWCMGLNSTQWAVIFSGVIHMHSFQGNV--ARVKDLVADMKEAALPLSRDCYTALIR 238
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
V AK+G++ +AE + LL + + +++ +E Y G K F +M
Sbjct: 239 VAAKDGNITEAESVFKDLLSAGHQPDWRSYISLIETYGAGGLPDKVQSTFDKMVAEGIHI 298
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
++ Y +I+ + K E S +++ E L SY L Y + M + +
Sbjct: 299 NLNVYQAVIKAMIKMGSIEGALSALEKAEEKFSFALHNSYNLLMEWYRSKDMLVDVEVVV 358
Query: 461 SECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
E KCRPN Y +ES G ++KAE ++ M+ ++ N ++ +++ A+
Sbjct: 359 ERMKEKKCRPNLQAYNNLIESFILRGQLDKAEGVYEDMN-NKGFQPNLQTYCLMIEAFSR 417
Query: 520 SGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLS---LNRKEVKKPVSLNLSSEQRENLI 576
+ + + Y L+ +K + M + V+ + E K+ V L +QR+ L+
Sbjct: 418 AERHERVKDCYALLTERKMVLPDETMIYVADVVGEKKVAEGEKKEIVKRKLVPKQRQILV 477
Query: 577 GLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEW--------------- 621
G+LLGG I S + + + + F+ + + +L +LYD + +W
Sbjct: 478 GVLLGGAQIISHDCNRTYEVCFKLTDATEAGPILINHLYDMFADWSQQAPRMEVDDDLGK 537
Query: 622 -------LHPSFKFW-----PKGRLVIPKLIHRWLTPRALAYWFMYGGHRT--SVGDILL 667
H S +F+ P+G+ VIP+LIHRWL P +LAYW+MYGG + + G IL
Sbjct: 538 KYHFSTVSHVSLQFYAQQYRPEGQPVIPRLIHRWLNPLSLAYWYMYGGEKCKETRGIILN 597
Query: 668 KLKVSSEGIALVFKTLKARSLDCRVKKKGRVFWIGFLGSNSTLFWKLIEPYVLDELKEDL 727
+ +S + LV K+LKA ++DC V+K+ + F G ++ WKL+EP++LDE+K DL
Sbjct: 598 ACQYTSMELTLVVKSLKAGTVDCFVRKRRSGNVLCFTGESAARIWKLMEPHILDEVK-DL 656
Query: 728 L 728
L
Sbjct: 657 L 657
>gi|302762128|ref|XP_002964486.1| hypothetical protein SELMODRAFT_438810 [Selaginella moellendorffii]
gi|300168215|gb|EFJ34819.1| hypothetical protein SELMODRAFT_438810 [Selaginella moellendorffii]
Length = 919
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 192/692 (27%), Positives = 341/692 (49%), Gaps = 42/692 (6%)
Query: 107 LPEQWRRAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRV 166
L E+W+R ++ WLC E+P V+ILN+Q KWL +D + + + I RV
Sbjct: 223 LNEEWKRKRIHWLCTEIPRLDSMQTVKILNSQVKWLHNKDISIVCHRLLSIDHFIRAHRV 282
Query: 167 YEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYL 226
++W Q+ W+ DF LA+++++ +G+ K + RD+FD II VP E T+ LI +YL
Sbjct: 283 FKWSQQRPWFVLDFQLASRMSELLGQTGKVGRARDLFDIIIQYAYVPKESTYSTLIKSYL 342
Query: 227 SAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNL 286
+DEA +YNRM + GGY+P + +SLF+ L ++ G S + +A +F+++
Sbjct: 343 QDGRYKYVDEAWKLYNRMREFGGYEPPAIVKHSLFKFL-TESGKASLRWADRANAVFNSI 401
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEG 346
L ++Y L+ +H+ + D+ R+ L +M+ G E + +++RVC+K G
Sbjct: 402 RECNLPCTTEMYETLVIIHAVKG--DEARVQFLVDDMKSQGLELSPLIFGALIRVCSKSG 459
Query: 347 DVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
+ AEK + +L E+ + ++ MEAY K G K++++FRE + +
Sbjct: 460 NYVKAEKLFEQLKETQEELDWHYYIALMEAYGKAGLPGKAMDLFRETENSPTFPKFALFK 519
Query: 407 KIIELLCKAEETELTESLMKEFVET--GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
IIE++ ++ E TE L+ + + + L ++ + +MY LG D++ ++
Sbjct: 520 IIIEVMASNDQVEATEELLGKLHPSLYKFQTLQSAFNAVMDMYSRLGKFDKVDSTYAYMS 579
Query: 465 EK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
+ CRPNR Y + L++ ++G ++KAEE++N+M + + + ++ I+L A+ +
Sbjct: 580 KHGCRPNRESYHLQLQAFIDSGRLDKAEELYNNMIERKCLRPDFKTHGIMLGAFGKADRK 639
Query: 524 VKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKE-VKKPVSLNLSSEQRENLIGLLLGG 582
K ++I+ L+ + + + ++ + E K V L+S QR L G+LL G
Sbjct: 640 DKVKEIFKLLTEHRQPVPEEFQPYVEASVKTTWVEKAKLYVRPKLTSTQRAILAGVLLAG 699
Query: 583 LCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEW-----------------LH-- 623
+ + I F+ + S L LY+ + +W LH
Sbjct: 700 TRMTA-ASYNGACIHFEQDAESYKGQALIHNLYEIFTDWAVETPKVVEDSGGQGRKLHFQ 758
Query: 624 --PSFKFW-------PKGRLVIPKLIHRWLTPRALAYWFMYGGHRTSVGDILL--KLKVS 672
P+ KF+ P G IP+L+HRW+ LAYW+MYGGHR+ G ++
Sbjct: 759 TTPNVKFYFYYHQYRPNGEQKIPRLVHRWIPELTLAYWYMYGGHRSPDGRSMVFNAEAYD 818
Query: 673 SEGIALVFKTLKARSLDCRVKKKGR-VFWIGFLGSNSTLFWKLIEPYVLDELKEDLLNEG 731
+ + LV + + R + CR+ + R ++ ++ WKL+ YVL EL L E
Sbjct: 819 HKELCLVVEAMYERRIQCRIMRDERGKHYLEISSESAVWLWKLVAEYVLPELIPLLKIEP 878
Query: 732 SEYRKLDTQNINFD---CGSDSDEKASDYSDD 760
+ + L+ GS +E S+ DD
Sbjct: 879 TSEQVLELPEPTHPFSRPGSSGEETDSEKEDD 910
>gi|302787078|ref|XP_002975309.1| hypothetical protein SELMODRAFT_442798 [Selaginella moellendorffii]
gi|300156883|gb|EFJ23510.1| hypothetical protein SELMODRAFT_442798 [Selaginella moellendorffii]
Length = 914
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 194/691 (28%), Positives = 344/691 (49%), Gaps = 41/691 (5%)
Query: 107 LPEQWRRAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRV 166
L E+W+R ++ WLC E+P V+ILN+Q KWL +D + + + I RV
Sbjct: 223 LNEEWKRKRIHWLCTEIPRLDSMQTVKILNSQVKWLHNKDISIVCHRLLSIDHFIRAHRV 282
Query: 167 YEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYL 226
++W Q+ W+ DF LA+++++ +G+ K + RD+FD II VP E T+ LI +YL
Sbjct: 283 FKWSQQRPWFVLDFQLASRMSELLGQTGKVGRARDLFDIIIQYAYVPKESTYSTLIKSYL 342
Query: 227 SAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNL 286
+DEA +YNRM + GGY+P + +SLF+ L ++ G S + +A +F+++
Sbjct: 343 QDGRYKYVDEAWKLYNRMREFGGYEPPAIVKHSLFKFL-TESGKASLRWADRANAVFNSI 401
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEG 346
L ++Y L+ +H+ + D+ R+ L +M+ G E + +++RVC+K G
Sbjct: 402 RECNLPCTTEMYETLVIIHAVKG--DEARVQFLVDDMKSQGLELSPLIFGALIRVCSKSG 459
Query: 347 DVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
+ AEK + +L E+ + ++ MEAY K G K++++FRE + +
Sbjct: 460 NYVKAEKLFEQLKETQEELDWHYYIALMEAYGKAGLPGKAMDLFRETENSPTFPKFALFK 519
Query: 407 KIIELLCKAEETELTESLMKEFVET--GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
IIE++ ++ E TE L+ + + + L ++ + MY LG D++ ++
Sbjct: 520 IIIEVMASNDQVEATEELLGKLHPSLYKFQTLQSAFNAVMEMYSRLGKFDKVDSTYAYMS 579
Query: 465 EK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
+ CRPNR Y + L++ ++G ++KAEE++N+M + + + ++ I+L AY +
Sbjct: 580 KHGCRPNRESYHLQLQAFIDSGRLDKAEELYNNMIERKCLRPDFKTHGIMLGAYGKADRK 639
Query: 524 VKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKE-VKKPVSLNLSSEQRENLIGLLLGG 582
K ++I+ L+ + + + ++ + E K V L+S QR L G+LL G
Sbjct: 640 DKVKEIFKLLTEHRQPVPEEFQPYVEASVKTTWVEKAKLYVRPKLTSTQRAILAGVLLAG 699
Query: 583 LCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEW-----------------LH-- 623
+ + I F+ + S L LY+ + +W LH
Sbjct: 700 TRMTA-ASYNGACIHFEQDAESYKGQALIHNLYEIFTDWAVETPKVVEDSGGQGRKLHFQ 758
Query: 624 --PSFKFW-------PKGRLVIPKLIHRWLTPRALAYWFMYGGHRTSVGDILL--KLKVS 672
P+ KF+ P G IP+L+HRW+ LAYW+MYGGHR+ G ++
Sbjct: 759 TTPNVKFYFYYHQYRPNGEQKIPRLVHRWIPELTLAYWYMYGGHRSLDGRSMVFNAEAYD 818
Query: 673 SEGIALVFKTLKARSLDCRVKKKGR-VFWIGFLGSNSTLFWKLIEPYVLDELKEDLLNEG 731
+ + LV + + R + CR+ + R ++ ++ WKL+ YVL EL L E
Sbjct: 819 HKELCLVVEAMYERRIQCRIMRDERGKHYLEISSESAVWLWKLVAEYVLPELIPLLKIEP 878
Query: 732 SEYRKLD-TQNINFDCGSDSD-EKASDYSDD 760
+ + L+ + + G ++D EK D S+D
Sbjct: 879 TSEQVLELPEPTHPFSGEETDSEKEDDLSED 909
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 161/358 (44%), Gaps = 18/358 (5%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D A+ + GK + + +F D+ G + + L+ AY G + A
Sbjct: 634 DSAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAET---GNFERAT 690
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRAL--VSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
+ M+ G QP + N + A K LS++Y + E + I +
Sbjct: 691 RALDNMVA-AGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPE----------MGITPN 739
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
+ ++ H++ N + E + ++M++AGF +V ++L + ++E DAE+
Sbjct: 740 SRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVK 799
Query: 357 RLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
+ ++ + + + + Y+K+G + K+ +F+ MQE S ++ +I L + +
Sbjct: 800 DIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQ 859
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYG 475
+ ++L++E ++TG P + +Y L + Y L ++ L F E C+P+ T Y
Sbjct: 860 MVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYN 919
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ + + AG K EE+ M +D + + ++++ +Y G KAE++ + +
Sbjct: 920 VMINVYRKAGEHRKIEEVIEQMKAD-GFEPSLTTIHMLMDSYGKGGATGKAEEVLETL 976
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 118/302 (39%), Gaps = 43/302 (14%)
Query: 181 ALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSI 240
A A + + G+ K + + + + G P+ TF ++ A+ G L+EA S+
Sbjct: 706 ACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAF---SRNGNLEEARSM 762
Query: 241 YNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSG 300
Y +M + G+ P + +L AL S+ + AE + ++ +GLE+ DIY+
Sbjct: 763 YRQMRE-AGFSPSIQVFKALL-ALYSR-----ETVEIDAEELVKDIKKAGLELDMDIYNH 815
Query: 301 LIWLHS---------------------------------YQDNIDKERISLLKKEMQQAG 327
+I L+S Y N + L +EM + G
Sbjct: 816 MISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTG 875
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSL 387
+++ + EDAE + + E+ A+ + Y K GE K
Sbjct: 876 NAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIE 935
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
E+ +M+ S+ H +++ K T E +++ E GM P Y ++ N +
Sbjct: 936 EVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSH 995
Query: 448 LN 449
LN
Sbjct: 996 LN 997
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 124/294 (42%), Gaps = 18/294 (6%)
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
++G P +TF+I+I A +Q L A S+ + G +P +N+L A
Sbjct: 142 DRGCRPDLVTFNIVIKARTRGGMQEGL--ASSLLQD-VYAAGLRPDTITYNTLISAC--- 195
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
L+ L A IF + G + Y+ +I ++ + E S + + MQ+ G
Sbjct: 196 --SLNNR-LSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRV--EAASSIFRIMQEQG 250
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMK 385
F SVL A++G +E+ E+ +R + D + Y + Y K G K
Sbjct: 251 FTPDAVTYNSVLHAFARDGRIEEVER--IRGMMRDARCSSDEITYNTMIHMYGKAGMHRK 308
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+ E++ +M+E + +I+ L KA ++ ++ +++ ++P + ++ +
Sbjct: 309 AEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMIC 368
Query: 446 MYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
Y M +S C+ + RP+ Y + L+ A EK ++ M
Sbjct: 369 AYAKADMFSDAEHTYS-CMLRAGVRPDLLAYSVMLDVFFKAEMPEKCIILYKAM 421
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 134/328 (40%), Gaps = 17/328 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
IF+++ QG P T++ +I Y A G ++ A SI+ R++Q G+ P +NS+
Sbjct: 207 IFEEMQRQGCDPDIWTYNAMISVYGRA---GRVEAASSIF-RIMQEQGFTPDAVTYNSVL 262
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
A ++ G + + +++ + + S EI Y+ +I H Y + L
Sbjct: 263 HAF-ARDGRIEE--VERIRGMMRDARCSSDEI---TYNTMI--HMYGKAGMHRKAEELYV 314
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
+M++ G ++ K G V +A + +L+S AF + AYAK
Sbjct: 315 QMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKAD 374
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
F + + M + AY ++++ KAE E L K V +G+KP + Y
Sbjct: 375 MFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPEKCIILYKAMVGSGLKPELSVYA 434
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQ 501
+ ++ + + LA E L K + L S G + + Q
Sbjct: 435 IMVRVF-----YQKSSLAEIENLSKEMVQSSASLAALSSTLAKGGFYAEAAVVLKISFAQ 489
Query: 502 TIGVNTRSCNIILSAYLSSGDFVKAEKI 529
+ V + N +L A+ +SG A +
Sbjct: 490 GVAVKVETLNDVLGAFEASGKLSDARDL 517
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 157/352 (44%), Gaps = 20/352 (5%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + + K KF + + + + +G P+E+ ++ LI Y G L +A I M+
Sbjct: 389 LINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCK---MGNLGDALRIRGDMV 445
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
G P NS+ + K G ++QAE I +L+ G I ++ +I H
Sbjct: 446 S-KGINPNSVTLNSIIQGFC-KIG-----QMEQAECILEEMLSRGFSINPGAFTTII--H 496
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG- 364
N E +EM +L +++ KEG DA + W RLLE G
Sbjct: 497 WLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGA 556
Query: 365 --IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+ T A ++ + K G +++ + ++M ER Y+ +I CK + E
Sbjct: 557 NLVTTNALIHGL---CKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGF 613
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESL 481
L E V+ G++P +Y L + +G D ++EC + PN YG+ ++
Sbjct: 614 KLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGY 673
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A IE+ E++F + + Q + +N+ N ++ AY +G+ V+A K++D M
Sbjct: 674 CKADKIEEGEKLFTELLT-QNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM 724
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 80/180 (44%), Gaps = 2/180 (1%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
K +E+ EK + LL + + + + + AY + G +++ ++ +M+ + +
Sbjct: 674 CKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTT 733
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
Y +I +C E + L+ E + G+ P + Y L Y LG D++ E
Sbjct: 734 ATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQE 793
Query: 463 CLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
PN+ Y + ++ +G+++ A ++ + M + I +T + N++ + + G
Sbjct: 794 MSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM-VGKGIVPDTVTYNVLTNGFCKEG 852
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 158/353 (44%), Gaps = 22/353 (6%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + + K KF + + + + +G P+E+ ++ LI Y G L +A I M+
Sbjct: 322 LINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCK---MGNLGDALRIRGDMV 378
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI-WL 304
G P NS+ + K G ++QAE I +L+ G I ++ +I WL
Sbjct: 379 S-KGINPNSVTLNSIIQGF-CKIG-----QMEQAECILEEMLSRGFSINPGAFTTIIHWL 431
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
N E +EM +L +++ KEG DA + W RLLE G
Sbjct: 432 CM---NSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFG 488
Query: 365 ---IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
+ T A ++ + K G +++ + ++M ER Y+ +I CK + E
Sbjct: 489 ANLVTTNALIHGL---CKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEG 545
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLES 480
L E V+ G++P +Y L + +G D ++EC + PN YG+ ++
Sbjct: 546 FKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDG 605
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A IE+ E++F + + Q + +N+ N ++ AY +G+ V+A K++D M
Sbjct: 606 YCKADKIEEGEKLFTELLT-QNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM 657
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 85/192 (44%), Gaps = 2/192 (1%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
K +E+ EK + LL + + + + + AY + G +++ ++ +M+ + +
Sbjct: 607 CKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTT 666
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
Y +I +C E + L+ E + G+ P + Y L Y LG D++ E
Sbjct: 667 ATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQE 726
Query: 463 CLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
PN+ Y + ++ +G+++ A ++ + M + I +T + N++ + + G
Sbjct: 727 MSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM-VGKGIVPDTVTYNVLTNGFCKEG 785
Query: 522 DFVKAEKIYDLM 533
+ KI D M
Sbjct: 786 KIEEGFKICDYM 797
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 158/356 (44%), Gaps = 14/356 (3%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D A+ + GK + + +F D+ G + + L+ AY G + A
Sbjct: 645 DSAMHVAIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAET---GNFERAT 701
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
+ M+ G QP + N + A G + + +EF F L G+ +
Sbjct: 702 RALDNMVA-AGLQPNATCANYVLEAF-----GRAGKAKEISEF-FQRLPEMGISPNSRTF 754
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
++ H++ N + E + ++M++AGF +V ++L + ++E DAE+ +
Sbjct: 755 --VVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDI 812
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
++ + + + + Y+K+G + + +F+ MQE S ++ +I L + +
Sbjct: 813 KKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMV 872
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIY 477
+ ++L++E ++TG P + +Y L + Y L ++ L F E C+P+ T Y +
Sbjct: 873 QEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVM 932
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ + AG K EEI M D + + ++++ +Y G KAE++ + +
Sbjct: 933 INVYRKAGEHRKIEEIIEQMKVD-GFEPSLTTIHMLMDSYGKGGATGKAEEVLETL 987
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 117/300 (39%), Gaps = 43/300 (14%)
Query: 183 ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYN 242
A + + G+ K + + F + G P+ TF ++ A+ G L+EA S+Y
Sbjct: 719 ANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAF---SRNGNLEEARSMYR 775
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
+M + G+ P + +L AL S+ + AE + ++ +GLE+ DIY+ +I
Sbjct: 776 QMKE-AGFSPSIQVFKALL-ALYSR-----ETVEIDAEELVKDIKKAGLELDIDIYNHMI 828
Query: 303 WLHS---------------------------------YQDNIDKERISLLKKEMQQAGFE 329
L+S Y N + L +EM + G
Sbjct: 829 SLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNA 888
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEI 389
+++ + EDAE + + E+ A+ + Y K GE K EI
Sbjct: 889 PNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEI 948
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
+M+ S+ H +++ K T E +++ E GM P Y ++ N +LN
Sbjct: 949 IEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLN 1008
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 123/293 (41%), Gaps = 16/293 (5%)
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
++G P +TF+I+I A +Q L A S+ + G +P +N+L A
Sbjct: 153 DRGCRPDLVTFNIVIKARTRGGMQEGL--ASSLLQD-VYAAGLRPDTITYNTLISAC--- 206
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
L+ L A IF + G + Y+ +I ++ + E S + + MQ+ G
Sbjct: 207 --SLNNR-LSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRV--EAASSIFRIMQEQG 261
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMK 385
F SVL A++G +E+ E+ +R + D + Y + Y K G K
Sbjct: 262 FTPDAVTYNSVLHAFARDGRIEEVER--IRGMMRDARCSSDEITYNTMIHMYGKAGMHRK 319
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+ E++ +M+E + +I+ L KA ++ ++ +++ ++P + ++ +
Sbjct: 320 AEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMIC 379
Query: 446 MYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
Y M +S L RP+ Y + L+ AG EK ++ M
Sbjct: 380 AYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEKCIILYKAM 432
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 167/356 (46%), Gaps = 18/356 (5%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D ++ T + + GK + + K + + + + ++ LI AY ++ GC + A
Sbjct: 778 DVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAAS---GCYERAR 834
Query: 239 SIYNRMIQLGGYQPRPSLH--NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
+I+N M++ G P P++ N L +AL+ G L + Y+ + L G +I K
Sbjct: 835 AIFNTMMRDG---PSPTVDSVNGLMQALIVD-GRLDELYV-----VIQELQDMGFKISKS 885
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
+ ++ ++ NI + + + + M+ AG+ + ++ + AK V D E
Sbjct: 886 SITLMLDAFAHAGNIFE--VKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVS 943
Query: 357 RLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
+ + + ++ Y IG+F K+ ++++ +QE Y+ +I + C+
Sbjct: 944 EMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDR 1003
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYG 475
E SLM E G++P + +Y +L + + L M ++ F L K C+ +R+ Y
Sbjct: 1004 RPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYH 1063
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
I ++ +N+GN KAE++ M + + + ++++ +Y SG +AEK+ D
Sbjct: 1064 IMMKMFRNSGNHSKAEKLLGVM-KEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLD 1118
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/373 (18%), Positives = 146/373 (39%), Gaps = 47/373 (12%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKER-------------------------- 194
+ VYEW+ +HWY + + + +GK
Sbjct: 201 QRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIFARAEAAXGNTVQVYNAM 260
Query: 195 --------KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQ 246
+F K +++ D + ++G P ++F+ LI A L + + A + N ++
Sbjct: 261 MGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTM-VTNLAIELLNE-VR 318
Query: 247 LGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHS 306
G QP +N+L A + L++A ++++++ Q D+++ +
Sbjct: 319 RSGIQPDIITYNTLISACSRESN------LEEAVKVYNDMVAH--RCQPDLWTYNAMISV 370
Query: 307 YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
Y L K+++ GF S+L A+EG+V+ ++ +++ G
Sbjct: 371 YGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKD 430
Query: 367 TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
+ + Y K G+ + +++ +M+ S Y +I+ L KA + +M
Sbjct: 431 EMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMS 490
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLESLKNA 484
E + +KP + ++ L Y G F +C+ + +P+ Y + L+ L
Sbjct: 491 EMLNAXVKPTLRTFSALICGYAKAGKRVEAEETF-DCMLRSGIKPDHLAYSVMLDILLRF 549
Query: 485 GNIEKAEEIFNHM 497
KA +++ M
Sbjct: 550 NESGKAMKLYQEM 562
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 167/356 (46%), Gaps = 18/356 (5%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D ++ T + + GK + + K + + + + ++ LI AY ++ GC + A
Sbjct: 746 DVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAAS---GCYERAR 802
Query: 239 SIYNRMIQLGGYQPRPSLH--NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
+I+N M++ G P P++ N L +AL+ G L + Y+ + L G +I K
Sbjct: 803 AIFNTMMRDG---PSPTVDSVNGLMQALIVD-GRLDELYV-----VIQELQDMGFKISKS 853
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
+ ++ ++ NI + + + + M+ AG+ + ++ + AK V D E
Sbjct: 854 SITLMLDAFAHAGNIFE--VKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVS 911
Query: 357 RLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
+ + + ++ Y IG+F K+ ++++ +QE Y+ +I + C+
Sbjct: 912 EMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDR 971
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYG 475
E SLM E G++P + +Y +L + + L M ++ F L K C+ +R+ Y
Sbjct: 972 RPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYH 1031
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
I ++ +N+GN KAE++ M + + + ++++ +Y SG +AEK+ D
Sbjct: 1032 IMMKMFRNSGNHSKAEKLLGVM-KEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLD 1086
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/373 (18%), Positives = 146/373 (39%), Gaps = 47/373 (12%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKER-------------------------- 194
+ VYEW+ +HWY + + + +GK
Sbjct: 169 QRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIFARAEAASGNTVQVYNAM 228
Query: 195 --------KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQ 246
+F K +++ D + ++G P ++F+ LI A L + + A + N ++
Sbjct: 229 MGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTM-VTNLAIELLNE-VR 286
Query: 247 LGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHS 306
G QP +N+L A + L++A ++++++ Q D+++ +
Sbjct: 287 RSGIQPDIITYNTLISACSRESN------LEEAVKVYNDMVAH--RCQPDLWTYNAMISV 338
Query: 307 YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
Y L K+++ GF S+L A+EG+V+ ++ +++ G
Sbjct: 339 YGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKD 398
Query: 367 TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
+ + Y K G+ + +++ +M+ S Y +I+ L KA + +M
Sbjct: 399 EMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMS 458
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLESLKNA 484
E + +KP + ++ L Y G F +C+ + +P+ Y + L+ L
Sbjct: 459 EMLNARVKPTLRTFSALICGYAKAGKRVEAEETF-DCMLRSGIKPDHLAYSVMLDILLRF 517
Query: 485 GNIEKAEEIFNHM 497
KA +++ M
Sbjct: 518 NESGKAMKLYQEM 530
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 157/366 (42%), Gaps = 15/366 (4%)
Query: 168 EWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLS 227
EW++Q +R D L D GK F+ + VP+E TF +LI Y
Sbjct: 92 EWVLQGTAFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRL 151
Query: 228 APVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLL 287
A G ++A ++ +M Q GY P P N+ L +K Y ++AE +F +L
Sbjct: 152 A---GSFEKAEELFVQM-QKRGYSPGPLACNTFLHVLED-----AKEY-RRAEALFRDLE 201
Query: 288 TSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGD 347
E D Y+ +I + Y + + +L + M++A +++ A++G
Sbjct: 202 KYECEPNIDTYNRMIVI--YGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGL 259
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
+AE+ + +L E D A+ MEAY++ G +LEIF+ MQ +++
Sbjct: 260 YREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNI 319
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEK 466
+I +A E E + K G P + S + L + Y G + + L + +
Sbjct: 320 LINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDG 379
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM--HSDQTIGVNTRSCNIILSAYLSSGDFV 524
+P+ IY + + +G E E + M S + + + N ++ Y +G
Sbjct: 380 TKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIP 439
Query: 525 KAEKIY 530
KAE+++
Sbjct: 440 KAEELF 445
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 177/382 (46%), Gaps = 23/382 (6%)
Query: 166 VYEWMMQQHWYRFDFALA---TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
Y+ + Q F FA + T + + GK + + K + ++ GR P T++ L+
Sbjct: 735 AYQVVNQAETKGFHFACSPMYTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLM 794
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH--NSLFRALVSKPGGLSKYYLQQAE 280
AY GC + A +I+N M++ G P P++ N L AL G L + Y+
Sbjct: 795 SAYAEC---GCYERARAIFNTMMRDG---PSPTVESINKLLHALCVD-GRLEELYV---- 843
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ L G +I K S L+ L ++ + ++ + M+ AG+ + ++
Sbjct: 844 -VVEELQDMGFKISKS--SILLMLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIE 900
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
+ K V DAE + E++ + + ++ Y I ++ K++++++ ++E
Sbjct: 901 LLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEP 960
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
Y+ +I + C+ E SLM++ G+ P + +Y +L + + ++ F
Sbjct: 961 DETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLF 1020
Query: 461 SECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
E L K + +R+ Y ++ +++G+ KAE++ M + I + ++++ +Y S
Sbjct: 1021 EELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLL-QMMKNAGIEPTLATMHLLMVSYSS 1079
Query: 520 SGDFVKAEKIYDLMCLKKYEIE 541
SG+ +AEK+ L LK E+E
Sbjct: 1080 SGNPQEAEKV--LSNLKNTEVE 1099
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 161/400 (40%), Gaps = 39/400 (9%)
Query: 109 EQWRRA--KLAWL-CKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFR 165
E W+RA WL + S + IL +W ++ LAV E G R
Sbjct: 169 ESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQES----LAVEIFTRAEPTVGDR 224
Query: 166 V--YEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIV 223
V Y MM + + KF+K +++ D + +G VP ++F+ LI
Sbjct: 225 VQVYNAMMGVY----------------SRSGKFSKAQELLDAMRQRGCVPDLISFNTLIN 268
Query: 224 AYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIF 283
A L + G M++ G +P +N+L A L+ A +F
Sbjct: 269 ARLKS--GGLTPNLVVELLDMVRNSGLRPDAITYNTLLSACSRDSN------LEGAVKVF 320
Query: 284 HNLLTSGLEIQKDIYSGLIWLHSYQD-NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
++ + Y+ +I ++ + ER+ + E++ GF S+L
Sbjct: 321 EDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFI---ELELKGFSPDAVTYNSLLYAF 377
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SAS 401
A+E + E ++ + ++ + G + + Y K G+ +L+++++M+ G +
Sbjct: 378 ARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPD 437
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
Y +I+ L KA + +LM E ++ G+KP + +Y L Y G + FS
Sbjct: 438 AITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFS 497
Query: 462 ECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
L +P+ Y + L+ L KA ++ M SD
Sbjct: 498 CMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISD 537
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 157/366 (42%), Gaps = 15/366 (4%)
Query: 168 EWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLS 227
EW++Q +R D L D GK F+ + VP+E TF +LI Y
Sbjct: 92 EWVLQGTTFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRL 151
Query: 228 APVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLL 287
A G ++A ++ +M Q GY P P N+ L +K Y ++AE +F +L
Sbjct: 152 A---GSFEKAEELFVQM-QKRGYSPGPLACNTFLHVLED-----AKEY-RRAEALFRDLE 201
Query: 288 TSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGD 347
E D Y+ +I + Y + + +L + M++A +++ A++G
Sbjct: 202 KYECEPNIDTYNRMIVI--YGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGL 259
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
+AE+ + +L E D A+ MEAY++ G +LEIF+ MQ +++
Sbjct: 260 YREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNI 319
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEK 466
+I +A E E + K G P + S + L + Y G + + L + +
Sbjct: 320 LINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDG 379
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM--HSDQTIGVNTRSCNIILSAYLSSGDFV 524
+P+ IY + + +G E E + M S + + + N ++ Y +G
Sbjct: 380 TKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIP 439
Query: 525 KAEKIY 530
+AE+++
Sbjct: 440 RAEELF 445
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 160/380 (42%), Gaps = 21/380 (5%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P +T+ +I + QG +D AC I M+ G P + S+ L + G +
Sbjct: 75 PDLVTYSTVINGFCK---QGEMDRACEILREMVTRDGIAPDVVTYTSVVDGL-CRDGKMD 130
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLI--WLHSYQDNIDKERISLLKKEMQQAGFEE 330
+ A + + G+E K +S LI W ++ + + E + L K+ + + ++
Sbjct: 131 R-----ACEMVREMKLKGVEPDKFTFSALITGWCNARKVD---EALKLYKEILTSSSWKP 182
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEI 389
+++ K G++E A K L ++E +P + + K G+ ++L++
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMK-MLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
FR M + +V Y +I LC A + + LM E T P SY L + Y
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCR 301
Query: 450 LGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTR 508
LG + F E K C P+R Y + NA +E+A + +M + I +
Sbjct: 302 LGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 361
Query: 509 SCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL-DYVLSLNRKEVKKPVSLNL 567
+ +I+++ Y + FV+A + M + + L D + R + V N+
Sbjct: 362 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNM 421
Query: 568 SSEQRENLIGL---LLGGLC 584
+++ E +G ++G LC
Sbjct: 422 VNKRVEPSVGTFNSVIGALC 441
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/344 (19%), Positives = 134/344 (38%), Gaps = 16/344 (4%)
Query: 158 RENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMT 217
R+ + ++Y+ ++ ++ D T L D K K + + + VP+ +T
Sbjct: 162 RKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVT 221
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
+ L+ A G LD+A ++ RM G P + +L L + + +
Sbjct: 222 YSSLLHGLCKA---GDLDQALDLFRRMTS-KGCVPNVVTYTTLIHGLCAA------HKVD 271
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
A + + + Y+ L+ + I++ + L KEM +
Sbjct: 272 AARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAK--QLFKEMATKSCLPDRITYTC 329
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQE 395
++R +E+A + L +++ GI Y + Y++ F+++ E +EM
Sbjct: 330 LVRGFCNASRLEEA-RFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIA 388
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHD 454
R + + Y +I+ LCKA + ++K V ++P + ++ ++ LG M +
Sbjct: 389 RNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDE 448
Query: 455 RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
L + P Y LE G +E A E+F M
Sbjct: 449 AWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMR 492
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 147/323 (45%), Gaps = 16/323 (4%)
Query: 162 TGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHIL 221
T +++ WM + H + ++ + K +F+ ++ G +P+ +T++ L
Sbjct: 391 TALKIFHWM-EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449
Query: 222 IVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAE 280
I YL+ +G ++ A + + M + G +P +N L G SK+ L+ A
Sbjct: 450 INGYLT---KGNVNNAARLLDLMKE-NGCEPDEWTYNELV-------SGFSKWGKLESAS 498
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
F F ++ GL Y+ LI HS +D +SLLK+ M++ G E +V+
Sbjct: 499 FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIA-LSLLKR-MEEMGCNPNVESYNAVIN 556
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
+KE +AEK +++E + ++ + G + +IF +M++R
Sbjct: 557 GLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLP 616
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
++ Y +I LC+ + + E L+KE G+ P ++ +L + ++ LG D L
Sbjct: 617 NLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLL 676
Query: 461 SECLE-KCRPNRTIYGIYLESLK 482
++ C+PN Y + L+ L+
Sbjct: 677 RRMVDMGCKPNYRTYSVLLKGLQ 699
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 176/430 (40%), Gaps = 44/430 (10%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M++ R + T L + + K ++ ++ +G VP+ +T++ LI V
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC---V 385
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G A I++ M + G +N + + L GG +++A +F +L G
Sbjct: 386 GGRFSTALKIFHWM-EGHGSLANTQTYNEIIKGLCL--GG----DIEKAMVLFEKMLKMG 438
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
Y+ LI + + N++ + L M++ G E + ++ +K G +E
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNA--ARLLDLMKENGCEPDEWTYNELVSGFSKWGKLES 496
Query: 351 AEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
A + ++E P P ++ ++ ++K G+ +L + + M+E + +V +Y+ +I
Sbjct: 497 ASFYFQEMVECGLN-PNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVI 555
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE---- 465
L K E + + VE G L+P+ I T + L + R AF +
Sbjct: 556 NGLSKENRFSEAEKICDKMVEQG---LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR 612
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG---- 521
KC PN Y + L G ++AE + M + + + + ++ ++ G
Sbjct: 613 KCLPNLYTYSSLIYGLCQEGKADEAEILLKEMER-KGLAPDEVTFTSLIDGFVVLGRIDH 671
Query: 522 DFVKAEKIYDLMCLKKYEIESAWMEKL----------------DYVLSLNRKEVKKPVSL 565
F+ ++ D+ C Y S ++ L +Y L N ++ +P+
Sbjct: 672 AFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLEEKIFPLVDNYFLGCNPLQLHRPI-- 729
Query: 566 NLSSEQRENL 575
N+ S +E +
Sbjct: 730 NVVSPHKETI 739
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 145/377 (38%), Gaps = 48/377 (12%)
Query: 158 RENETGFRVYEWMMQQHWYRFDFAL--ATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R E RV +++ + F F+L L + K R+++ ++N G PS
Sbjct: 139 RNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSL 198
Query: 216 MTFHILI----------------------------VAYLSAPVQGC----LDEACSIYNR 243
+TF+ LI Y S + C LD A +++R
Sbjct: 199 LTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDR 258
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M++ G P +++L L ++ + +A + ++ G+E +Y+ +
Sbjct: 259 MVK-EGCDPNSVTYSTLINGLCNEG------RVDEALDMLEEMIEKGIE--PTVYTYTLP 309
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ + +E L M++ G + +++ ++ G +E A + ++L+
Sbjct: 310 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 369
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
T + + G F +L+IF M+ A+ Y++II+ LC + E
Sbjct: 370 VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 429
Query: 424 LMKEFVETGMKPLMPSYINLTNMYL---NLGMHDRLHLAFSECLEKCRPNRTIYGIYLES 480
L ++ ++ G P + +Y L N YL N+ RL E C P+ Y +
Sbjct: 430 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE--NGCEPDEWTYNELVSG 487
Query: 481 LKNAGNIEKAEEIFNHM 497
G +E A F M
Sbjct: 488 FSKWGKLESASFYFQEM 504
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 174/431 (40%), Gaps = 46/431 (10%)
Query: 127 KGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKL 186
KG + ++ L+ Q K +AVH ++ E+ + + W+ ++ +Y+ + +
Sbjct: 61 KGSSELKQLSPQLK--AHHVAEIVAVH----KDTESVIQFFYWISKRPFYKHNMNCFISM 114
Query: 187 ADYMGKERKFA-----------KCR---------DIFDDIINQGRVPSEMTFHILIVAYL 226
+ + ++R FA CR D ++I G S + + L++
Sbjct: 115 LNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLA 174
Query: 227 SAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNL 286
+ ++ A ++Y +M+ G QP N+L L SK G + ++AE I +
Sbjct: 175 KFEM---VEGARNLYKQMLN-SGIQPSLLTFNTLINIL-SKKGKV-----REAELILSQI 224
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEG 346
L Y+ LI H N+D M + G + +++ EG
Sbjct: 225 FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVF--DRMVKEGCDPNSVTYSTLINGLCNEG 282
Query: 347 DVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPA 404
V++A ++E GI + Y + A I +++E+ M++R +V
Sbjct: 283 RVDEALDMLEEMIEK--GIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQT 340
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
Y +I L + + E+ L + ++ G+ P +Y L N L +G L +
Sbjct: 341 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALIN-ELCVGGRFSTALKIFHWM 399
Query: 465 EK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
E N Y ++ L G+IEKA +F M + + N +++ YL+ G+
Sbjct: 400 EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPT-VVTYNTLINGYLTKGN 458
Query: 523 FVKAEKIYDLM 533
A ++ DLM
Sbjct: 459 VNNAARLLDLM 469
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 101/480 (21%), Positives = 200/480 (41%), Gaps = 34/480 (7%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
KE+ ++ +D+ ++ VP+ T ++I G +++A ++ M+ LG +
Sbjct: 423 KEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCR---HGSIEDASRVFEIMVSLG-VK 478
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P ++ +L + G + + Q+A I + G++ Y+ +I +
Sbjct: 479 PNAVIYTTLIK------GHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKM 532
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE---SDNGIPTP 368
++ + L+ EM + G + +++ K G+++ A++ + +L + N +
Sbjct: 533 EEAKDYLV--EMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCT 590
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
A + + Y K G ++ IFR M R V Y +I L + + + L+ EF
Sbjct: 591 ALI---DGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF 647
Query: 429 VETGMKPLMPSYINLTNMYLNL-GMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNI 487
+E G+ P + +Y ++ + + G+ L C + PN Y + L AG I
Sbjct: 648 LEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEI 707
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEK 547
E+A E+F+ + + + N + I+ Y SG+ KA +++D M LK +S
Sbjct: 708 ERARELFDGI-PGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSA 766
Query: 548 LDYVLSLNRKE--VKKPVSLNLSSEQR----ENLIGLLLGGLCIESDEKRKRHMIRFQFN 601
L + RKE +K +SL L S Q+ + + L+ G C ++ +
Sbjct: 767 L---IDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVD 823
Query: 602 ENSRMHSVLRRYLYDQYHEWLHPSFKFWPKGRLVIPKLIHRWLTPRALAYWFMYGGHRTS 661
++ + V L D H F + + R L P AL Y + G+ +
Sbjct: 824 KHVKPDHVTYTILID-----YHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMA 878
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 157/356 (44%), Gaps = 20/356 (5%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
+M + D + L D GK+++ + + + +++ ++G P + + LI ++
Sbjct: 296 LMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMR-- 353
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY-LQQAEFIFHNLLT 288
QG EA + M+ G L+ + ALV G+ K+ +++A+ + + ++
Sbjct: 354 -QGDSGEAFRVKEEMLARG-----VKLNLFTYNALVK---GVCKFGDMEKADALLNEMIM 404
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
G++ Y+ +I Y + R+ L EM+++ ++ + G +
Sbjct: 405 VGIKPDTQTYNNMI--EGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSI 462
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
EDA + + ++ G+ A +Y ++ + + G F +++ I + M ++ V Y+
Sbjct: 463 EDASRVFEIMVSL--GVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYN 520
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE- 465
+I LCK+ + E + + E +E G+KP + +Y L + Y G F E L
Sbjct: 521 SVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGC 580
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
PN + ++ G+ +A IF M +++ + R+ + ++ L +G
Sbjct: 581 GIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLG-RSVHPDVRTYSALIHGLLRNG 635
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 154/339 (45%), Gaps = 18/339 (5%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
R++FD++ +G P+E TF IL+ Y A G D+ + N M G P ++N+
Sbjct: 167 RELFDEMPEKGCKPNEFTFGILVRGYCKA---GLTDKGLELLNSMESF-GVLPNKVVYNT 222
Query: 260 LFRALVSKPGGLSKYYL---QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERI 316
+ + + L + E + +++T I G + +D RI
Sbjct: 223 IVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKV--------LDASRI 274
Query: 317 SLLKKEMQQAGFEEGKEVLLSV-LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME 375
+ + G + ++ L+ K G +EDA+ + + E+D+ + ++ ++
Sbjct: 275 FSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQ 334
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ G+F+++ + ++M ++ S+ +Y+ +++ LCK ++++ G+ P
Sbjct: 335 GLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSP 394
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+Y L + Y ++G D E + C PN I L SL N G I +AEE+
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELL 454
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M+ ++ G++T +CNII+ SG+ KA +I M
Sbjct: 455 RKMN-EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 374 MEAYAKIGEFMKSLEIFREMQ-ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
+ K G F ++ +F EM E+L S+ AY+ I CK + ++K+ + G
Sbjct: 531 LNGLCKAGRFAEAKTLFAEMMGEKLQPDSL-AYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Query: 433 MKPLMPSYINLTNMYLNLGMHDR---LHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIE 488
+ +Y ++ L LG+ ++ +H E EK PN Y ++ L G +E
Sbjct: 590 CHKSLETY---NSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVE 646
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
A + + M + I N S ++ A+ DF A+++++
Sbjct: 647 DATNLLDEMMQ-KNIAPNVFSFKYLIGAFCKVPDFDMAQEVFE 688
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 47/106 (44%)
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+ EM+E+ S ++ Y+ I+ LC+ + E +L+ E ++ + P + S+ L +
Sbjct: 616 LMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFC 675
Query: 449 NLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ D F + C +Y + L AG + KA E+
Sbjct: 676 KVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELL 721
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g18110,
chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE
1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 172/370 (46%), Gaps = 23/370 (6%)
Query: 178 FDFALA---TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCL 234
F FA + T + + GK++ + K + ++ GR P T++ L+ AY GC
Sbjct: 747 FHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQC---GCY 803
Query: 235 DEACSIYNRMIQLGGYQPRPSLH--NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLE 292
+ A +I+N M++ G P P++ N L AL G L + Y+ + L G +
Sbjct: 804 ERARAIFNTMMRDG---PSPTVESINILLHALCVD-GRLEELYV-----VVEELQDMGFK 854
Query: 293 IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
I K S L+ L ++ + + + M+ AG+ + ++ + K V DAE
Sbjct: 855 ISKS--SILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAE 912
Query: 353 KTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+ E++ + + ++ Y I ++ K++++++ ++E Y+ +I +
Sbjct: 913 IMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMY 972
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNR 471
C+ E LM++ G+ P + +Y +L + + ++ F E L K + +R
Sbjct: 973 CRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDR 1032
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
+ Y ++ +++G+ KAE++ M + I + ++++ +Y SSG+ +AEK+
Sbjct: 1033 SFYHTMMKISRDSGSDSKAEKLL-QMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKV-- 1089
Query: 532 LMCLKKYEIE 541
L LK E+E
Sbjct: 1090 LSNLKDTEVE 1099
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 163/401 (40%), Gaps = 41/401 (10%)
Query: 109 EQWRRA--KLAWL-CKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFR 165
E W+RA WL + S + IL +W ++ LAV E G R
Sbjct: 169 ESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQES----LAVEIFTRAEPTVGDR 224
Query: 166 V--YEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIV 223
V Y MM + + KF+K +++ D + +G VP ++F+ LI
Sbjct: 225 VQVYNAMMGVY----------------SRSGKFSKAQELVDAMRQRGCVPDLISFNTLIN 268
Query: 224 AYLSAPVQGCLDEACSI-YNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
A L + G L ++ M++ G +P +N+L A L A +
Sbjct: 269 ARLKS---GGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSN------LDGAVKV 319
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQD-NIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
F ++ + Y+ +I ++ + ER+ + E++ GF S+L
Sbjct: 320 FEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFM---ELELKGFFPDAVTYNSLLYA 376
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SA 400
A+E + E ++ + ++ + G + + Y K G+ +L+++++M+ G +
Sbjct: 377 FARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNP 436
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
Y +I+ L KA T +LM E ++ G+KP + +Y L Y G + F
Sbjct: 437 DAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTF 496
Query: 461 SECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
S L +P+ Y + L+ L KA ++ M SD
Sbjct: 497 SCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISD 537
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 102/227 (44%), Gaps = 16/227 (7%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYL--SA 228
M++ ++ + A+ + + K ++ I G P E T++ LI+ Y
Sbjct: 918 MEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRR 977
Query: 229 PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
P +G L + +M L G P+ + SL A G K L+QAE +F LL+
Sbjct: 978 PEEGYL-----LMQQMRNL-GLDPKLDTYKSLISAF-----GKQK-CLEQAEQLFEELLS 1025
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
GL++ + Y ++ + +D+ + L + M+ AG E + ++ + G+
Sbjct: 1026 KGLKLDRSFYHTMMKIS--RDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNP 1083
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
++AEK L +++ + T + ++AY + ++ +E EM++
Sbjct: 1084 QEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKK 1130
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 172/370 (46%), Gaps = 23/370 (6%)
Query: 178 FDFALA---TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCL 234
F FA + T + + GK++ + K + ++ GR P T++ L+ AY GC
Sbjct: 747 FHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQC---GCY 803
Query: 235 DEACSIYNRMIQLGGYQPRPSLH--NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLE 292
+ A +I+N M++ G P P++ N L AL G L + Y+ + L G +
Sbjct: 804 ERARAIFNTMMRDG---PSPTVESINILLHALCVD-GRLEELYV-----VVEELQDMGFK 854
Query: 293 IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
I K S L+ L ++ + + + M+ AG+ + ++ + K V DAE
Sbjct: 855 ISKS--SILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAE 912
Query: 353 KTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+ E++ + + ++ Y I ++ K++++++ ++E Y+ +I +
Sbjct: 913 IMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMY 972
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNR 471
C+ E LM++ G+ P + +Y +L + + ++ F E L K + +R
Sbjct: 973 CRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDR 1032
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
+ Y ++ +++G+ KAE++ M + I + ++++ +Y SSG+ +AEK+
Sbjct: 1033 SFYHTMMKISRDSGSDSKAEKLL-QMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKV-- 1089
Query: 532 LMCLKKYEIE 541
L LK E+E
Sbjct: 1090 LSNLKDTEVE 1099
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 165/403 (40%), Gaps = 45/403 (11%)
Query: 109 EQWRRA--KLAWL-CKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFR 165
E W+RA WL + S + IL +W ++ LAV E G R
Sbjct: 169 ESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQES----LAVEIFTRAEPTVGDR 224
Query: 166 V--YEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIV 223
V Y MM + + KF+K +++ D + +G VP ++F+ LI
Sbjct: 225 VQVYNAMMGVY----------------SRSGKFSKAQELVDAMRQRGCVPDLISFNTLIN 268
Query: 224 AYLSAPVQGCLDEACSI-YNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
A L + G L ++ M++ G +P +N+L A L A +
Sbjct: 269 ARLKS---GGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSN------LDGAVKV 319
Query: 283 FHNLLTSGLEIQKDI--YSGLIWLHSYQD-NIDKERISLLKKEMQQAGFEEGKEVLLSVL 339
F ++ Q D+ Y+ +I ++ + ER+ + E++ GF S+L
Sbjct: 320 FEDM--EAHRCQPDLWTYNAMISVYGRCGLAAEAERLFM---ELELKGFFPDAVTYNSLL 374
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG- 398
A+E + E ++ + ++ + G + + Y K G+ +L+++++M+ G
Sbjct: 375 YAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGR 434
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
+ Y +I+ L KA T +LM E ++ G+KP + +Y L Y G +
Sbjct: 435 NPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAED 494
Query: 459 AFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
FS L +P+ Y + L+ L KA ++ M SD
Sbjct: 495 TFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISD 537
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 102/227 (44%), Gaps = 16/227 (7%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYL--SA 228
M++ ++ + A+ + + K ++ I G P E T++ LI+ Y
Sbjct: 918 MEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRR 977
Query: 229 PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
P +G L + +M L G P+ + SL A G K L+QAE +F LL+
Sbjct: 978 PEEGYL-----LMQQMRNL-GLDPKLDTYKSLISAF-----GKQK-CLEQAEQLFEELLS 1025
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
GL++ + Y ++ + +D+ + L + M+ AG E + ++ + G+
Sbjct: 1026 KGLKLDRSFYHTMMKIS--RDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNP 1083
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
++AEK L +++ + T + ++AY + ++ +E EM++
Sbjct: 1084 QEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKK 1130
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 181/408 (44%), Gaps = 25/408 (6%)
Query: 130 TLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADY 189
+L +I A W +D +AV R+ E V EW++++ +R D L D
Sbjct: 125 SLDKIPQAHDLW---DDIVNVAVQLRLNRQWEPIITVCEWVLRRSSFRPDIICYNLLIDA 181
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
G++R+ ++ + ++ VP+E T+ +L+ AY + G L A + + M Q G
Sbjct: 182 YGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGS---GQLHRAEGVISEM-QRNG 237
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
P +++N+ L L ++A ++ + + Y+ +I ++ +
Sbjct: 238 IPPTATVYNAYLDGL------LKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAN 291
Query: 310 NIDKERISLLK--KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+ +S L+ +EM+ G + +++ A+EG E AE+ + + ++ +
Sbjct: 292 ----QPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDV 347
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
A+ MEAY++ G + EIF M+ +Y+ +++ +A + E+ +E
Sbjct: 348 YAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQE 407
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLESLKNAG 485
+ GM+P M S++ L + + G R ++ L K RP+ L + AG
Sbjct: 408 LKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQ-LHKSGLRPDTFALNAMLNAYGRAG 466
Query: 486 NIEKAEEIFNHM-HSDQTI--GVNTRSCNIILSAYLSSGDFVKAEKIY 530
++ E +F M D I +T + N++++AY +G + E +
Sbjct: 467 RLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLDRMEAAF 514
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 102/256 (39%), Gaps = 16/256 (6%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + +E K ++F+++ G P ++ L+ AY A G A I++
Sbjct: 316 TALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRA---GLPQGASEIFSL 372
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M +G +P + +N L A GL Q+AE F L G+ + L+
Sbjct: 373 MEHMG-CEPDRASYNILVDAF--GRAGLH----QEAEAAFQELKQQGMRPTMKSHMLLLS 425
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
H+ N+ R + ++ ++G L ++L + G ++D E+ + + D
Sbjct: 426 AHARSGNV--ARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDG 483
Query: 364 GIP----TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
I T + + AY + G + FR + R +A V + I + +E
Sbjct: 484 AIAGAPDTSTYNVMVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYG 543
Query: 420 LTESLMKEFVETGMKP 435
+ +E V+ G P
Sbjct: 544 QCLRVFEEMVDAGCYP 559
>gi|357491817|ref|XP_003616196.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517531|gb|AES99154.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 981
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 151/345 (43%), Gaps = 19/345 (5%)
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
G + + D + +G + T++I + Y +A G +D A S Y R+ ++G +
Sbjct: 339 GSHGNLLEAESLLDKMEERGISSNTRTYNIFLSLYATA---GSIDAALSYYRRIREVGLF 395
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
P + +L AL ++ +Q E + + + + + SG++ ++ + +
Sbjct: 396 -PDTVTYRALLGALCTEN------MVQAVEGVIDEMEKNSVSLDALSLSGIVKMYINEGD 448
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE-SDNGIPTPA 369
+DK LL+K + F + +++ A++G +AE + R + +
Sbjct: 449 VDKAN-DLLQKYGEPPSF-----ICAAIIDAFAEKGFWAEAENIFYRKRDKARQARDILE 502
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
F ++AY K + K++ +F EM+ + S + Y+ II++L A+ + L E
Sbjct: 503 FNVMIKAYGKANHYDKAVLLFEEMKYQGISPADSTYNSIIQMLSGADLVDQARDLTVEMQ 562
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIE 488
E G KP ++ + Y LG + + E + +PN T+YG + G ++
Sbjct: 563 EMGFKPHCQTFSAVIGCYARLGQLSDAVIVYQEMISAGVKPNETVYGALINGFAEHGRLD 622
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+A + F H+ + + N ++ +Y +GD + IY M
Sbjct: 623 EALQYF-HLMQESGLSANLVVLTTLMKSYSKAGDLKGVKSIYKQM 666
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 127/283 (44%), Gaps = 16/283 (5%)
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
F ++ G + Y +A +F + G+ Y+ +I + S D +D+ R L
Sbjct: 503 FNVMIKAYGKANHY--DKAVLLFEEMKYQGISPADSTYNSIIQMLSGADLVDQARD--LT 558
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
EMQ+ GF+ + +V+ A+ G + DA + ++ + G+ VY + +A
Sbjct: 559 VEMQEMGFKPHCQTFSAVIGCYARLGQLSDAVIVYQEMISA--GVKPNETVYGALINGFA 616
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
+ G ++L+ F MQE SA++ +++ KA + + +S+ K+ +
Sbjct: 617 EHGRLDEALQYFHLMQESGLSANLVVLTTLMKSYSKAGDLKGVKSIYKQMQNMEGVLDLA 676
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
+ ++ + LG+ L F + E + + T YGI + K+ G I++A +I M
Sbjct: 677 ARSSMITAFAELGLVSEAKLTFEKFKETGQADSTSYGIMMYVYKDIGMIDEAIKIAEEMK 736
Query: 499 SDQTIGVNTRSC---NIILSAYLSSGDFVK-AEKIYDLMCLKK 537
I R C N +L+ Y + F K E +Y+++ KK
Sbjct: 737 ----ISGLLRDCVSYNRVLTCYAINRQFHKCGELLYEMIVSKK 775
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 165/383 (43%), Gaps = 30/383 (7%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
+ EW+M + +R D + L D G+ + + +++ +P+E T+ +L+ AY
Sbjct: 141 ICEWIMNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAY 200
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHN 285
+ G L++A +++ M + G P ++N+ LV + +A IFH
Sbjct: 201 CKS---GLLEKAEAVFAEMRKYG-LSPSAIVYNAYIDGLVKGGNNV------KAVEIFHR 250
Query: 286 LLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKE--------VLLS 337
+ G + D Y+ LI ++ + K M Q F+E + +
Sbjct: 251 MKRDGCQPTTDTYTMLINVYGKES----------KSHMAQNIFDEMRTQRCKPNICTFTA 300
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
++ A+EG E AE+ + ++ E+ A+ ME+Y++ G + EIF MQ
Sbjct: 301 LVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMG 360
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
+Y+ +++ +A E +++ +E G+ P M S++ L + Y + G +
Sbjct: 361 CEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCE 420
Query: 458 LAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
+ + +P+ + L G K E++F+ M + + NI+++
Sbjct: 421 DIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPC-RADISTYNILINV 479
Query: 517 YLSSGDFVKAEKIYDLMCLKKYE 539
Y +G + E+++ L+ K E
Sbjct: 480 YGRAGFVERMEELFQLLPAKNLE 502
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 139/320 (43%), Gaps = 17/320 (5%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + GKE K ++IFD++ Q P+ TF L+ A +G ++A I+ +
Sbjct: 264 TMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAR---EGLCEKAEEIFEQ 320
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M Q GY+P +N+L + S+ G + A IF + G E + Y+ I
Sbjct: 321 M-QEAGYEPDVYAYNALMESY-SRAG-----FPYGAAEIFSLMQHMGCEPDRASYN--IM 371
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ +Y E + +EM++ G + + +L + G+V E ++ +S
Sbjct: 372 VDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKS-- 429
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
G+ FV + Y ++G+F K ++F MQ+ A + Y+ +I + +A E
Sbjct: 430 GLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERM 489
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLES 480
E L + ++P + ++ + Y ++ R F + ++ C P+ + L +
Sbjct: 490 EELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSA 549
Query: 481 LKNAGNIEKAEEIFNHMHSD 500
+ IE+ + MH D
Sbjct: 550 CSSEEQIEQVTNVVRTMHKD 569
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 150/345 (43%), Gaps = 18/345 (5%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
KE++ +FD+++++ P+ +T++ LI Y G L+EA +I RM ++ +
Sbjct: 229 KEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKV---GQLEEAFNIRERM-KVENVE 284
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P NSL L +++A+ + + G + Y+ L H N+
Sbjct: 285 PTIITFNSLLNGLCRAQ------MMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNV 338
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI-PTPAF 370
D L +E + G + +L KEG++E AE+ + LE NG+ P F
Sbjct: 339 DASIT--LSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLE--NGLAPVGVF 394
Query: 371 VYKM-EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
+ Y ++G+ K+ +M+ + Y+ +++ C+ + E E +K+ V
Sbjct: 395 FNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMV 454
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIE 488
E G+ P + +Y L + Y + DR E +K +PN YG + L NI
Sbjct: 455 EKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANIL 514
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+AE I M + + N + N+++ +G A + +D M
Sbjct: 515 EAEVILGDM-VHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEM 558
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 119/282 (42%), Gaps = 16/282 (5%)
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
G P + N +LVS +K Y + +F ++ SGL + +Y I
Sbjct: 142 GVLPSVASLNLFLESLVS-----TKRYEDTLQ-LFSEIVESGLRPDQFMYGKAIQAAVKL 195
Query: 309 DNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
++ K I L+ M++ G G V V+ KE ++DAEK + +L+
Sbjct: 196 GDL-KRAIELMTC-MKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRI 253
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
+ ++ Y K+G+ ++ I M+ ++ ++ ++ LC+A+ E + +++E
Sbjct: 254 TYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEM 313
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIY----GIYLESLKNA 484
G P +Y L + +L G D + SE E R I I L +L
Sbjct: 314 EVYGFVPDRFTYTTLFDGHLKCGNVDA-SITLSE--EAVRKGVQILDYTCSILLNALCKE 370
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
GN+EKAEE+ + V N I++ Y GD KA
Sbjct: 371 GNMEKAEEVLKKFLENGLAPVGVFF-NTIVNGYCQVGDINKA 411
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 137/325 (42%), Gaps = 14/325 (4%)
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG 269
G VP T+ L +L G +D + ++ ++ G Q + L AL K G
Sbjct: 317 GFVPDRFTYTTLFDGHLKC---GNVDASITLSEEAVR-KGVQILDYTCSILLNAL-CKEG 371
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
+ K AE + L +GL ++ ++ + +I+K ++ K M+ G
Sbjct: 372 NMEK-----AEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEK--MEAVGLR 424
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEI 389
S+++ + ++E+AEK +++E + ++ Y + F + +I
Sbjct: 425 PNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQI 484
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
EM+++ +V +Y +I LCK E ++ + V G+ P Y L +
Sbjct: 485 LEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCI 544
Query: 450 LGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTR 508
G F E + + P Y I + L G + +AE + + + + + + +
Sbjct: 545 AGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEI-TRKGLSFDVI 603
Query: 509 SCNIILSAYLSSGDFVKAEKIYDLM 533
+ N ++S Y S+G+ KA ++Y+ M
Sbjct: 604 TYNSLISGYSSAGNVQKALELYETM 628
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 178/408 (43%), Gaps = 25/408 (6%)
Query: 130 TLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADY 189
+L +I A W +D +AV R+ E V EW++++ +R D L D
Sbjct: 125 SLDKIPQAHDLW---DDIVNVAVQLRLNRQWEPIITVCEWVLRRSSFRPDIICYNLLIDA 181
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
G++R+ ++ + ++ VP+E T+ +L+ AY + G L A + + M Q G
Sbjct: 182 YGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGS---GQLHRAEGVISEM-QRNG 237
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
P +++N+ L L ++A ++ + + Y +I ++ +
Sbjct: 238 IPPTATVYNAYLDGL------LKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKAN 291
Query: 310 NIDKERISLLK--KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+ +S L+ +EM+ G + +++ A+EG E AE+ + + ++ +
Sbjct: 292 ----QPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDV 347
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
A+ MEAY++ G + EIF M+ +Y+ +++ +A + E+ +E
Sbjct: 348 YAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQE 407
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLESLKNAG 485
+ GM+P M S++ L + + G R ++ L K RP+ L + AG
Sbjct: 408 LKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQ-LHKSGLRPDTFALNAMLNAYGRAG 466
Query: 486 NIEKAEEIFNHMHSDQTIGV---NTRSCNIILSAYLSSGDFVKAEKIY 530
++ E +F M +T + N++++AY +G + E +
Sbjct: 467 RLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYGRAGYLDRMEAAF 514
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 103/256 (40%), Gaps = 16/256 (6%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + +E K ++F+++ G P ++ L+ AY A G A I++
Sbjct: 316 TALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRA---GLPQGASEIFSL 372
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M +G +P + +N L A GL Q+AE F L G+ + L+
Sbjct: 373 MEHMG-CEPDRASYNILVDAF--GRAGLH----QEAEAAFQELKQQGMRPTMKSHMLLLS 425
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
H+ N+ R + ++ ++G L ++L + G ++D E+ + + D
Sbjct: 426 AHARSGNV--ARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDG 483
Query: 364 ---GIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
G P T + + AY + G + FR + R +A V + I + +E
Sbjct: 484 ASAGAPDTSTYNVLVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYG 543
Query: 420 LTESLMKEFVETGMKP 435
+ +E V+ G P
Sbjct: 544 QCLRVFEEMVDAGCYP 559
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 178/408 (43%), Gaps = 56/408 (13%)
Query: 195 KFAKCRDIFDDIINQGR--VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
K KCR+ FD +I++ VP + ++ ++ A + +EA I +RM +
Sbjct: 258 KGGKCREAFD-LIDEAEDFVPDTVFYNRMVSGLCEASL---FEEAMDILHRM------RS 307
Query: 253 RPSLHNSL-FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
+ N + +R L+S G L K L + + I ++T G ++I++ LI H+Y +
Sbjct: 308 SSCIPNVVTYRILLS--GCLRKGQLGRCKRILSMMITEGCYPNREIFNSLI--HAYCKSR 363
Query: 312 DKERISLLKKEMQQAGFEEGKEVL-LSVLRVCAKE----GDVED-AEKTWLRLLESD--- 362
D L K+M + G + G V + + VC+ E D+ D EK + +L+
Sbjct: 364 DYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVL 423
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETE 419
N + F G+F ++ +I EM +G VP Y K+I LC A + E
Sbjct: 424 NKVNVSNFA---RCLCGAGKFDQAFKIICEM---MGKGFVPDDSTYSKVIGFLCDASKVE 477
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYL 478
SL +E G+ P + +Y L + + G+ + F E L K C PN Y +
Sbjct: 478 KAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALI 537
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKY 538
+ A + A+E+F M + N + ++ + +G KA +IY M +
Sbjct: 538 HAYLKAKQMPVADELFEMMLL-EGCKPNVVTYTALIDGHCKAGQIEKACQIYARM---RG 593
Query: 539 EIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLI--GLLLGGLC 584
+IES+ M+K L+ + P N+I G L+ GLC
Sbjct: 594 DIESSDMDKY---FKLDHNNCEGP-----------NVITYGALVDGLC 627
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 168/390 (43%), Gaps = 31/390 (7%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
+ F++ MM + + D + +K+ ++ K K +F+++ G VPS T+ I
Sbjct: 442 DQAFKIICEMMGKGFVPDD-STYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTI 500
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
LI ++ A G + +A ++ M+ G P + +L A L + A+
Sbjct: 501 LIDSFCKA---GLIQQARKWFDEMLH-KGCTPNVVTYTALIHAY------LKAKQMPVAD 550
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK--ERISLLKKEMQQAGFE--------- 329
+F +L G + Y+ LI H I+K + + ++ +++ + +
Sbjct: 551 ELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNN 610
Query: 330 -EGKEVLL--SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFM 384
EG V+ +++ K V++A + +L +G VY ++ + KIG+
Sbjct: 611 CEGPNVITYGALVDGLCKANRVKEAHELLDTMLA--HGCEPNQIVYDAVIDGFCKIGKLQ 668
Query: 385 KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT 444
+ E+F +M ER S ++ Y I+ L K +L ++ + +E P + Y +
Sbjct: 669 DAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMV 728
Query: 445 NMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
+ +G D + + EK C PN Y ++ +G IE+ E+F M S +
Sbjct: 729 DGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCS-KGC 787
Query: 504 GVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
N + ++++ S+G +A K+ D M
Sbjct: 788 APNFITYRVLINHCCSNGLLDEAYKLLDEM 817
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 159/370 (42%), Gaps = 21/370 (5%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
V EW++ + +R D L D G++R+ K I+ ++ VP+E T+ +L+ AY
Sbjct: 173 VCEWIVYRSSFRPDIICYNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAY 232
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHN 285
+A L A + + M Q G P +++N+ L L +A ++
Sbjct: 233 CNAR---SLHRAEGVISEM-QEHGIPPSATVYNAYLDGL------LKARCTVKAVEVYQR 282
Query: 286 LLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK--KEMQQAGFEEGKEVLLSVLRVCA 343
+ + Y+ +I ++ K+ +S +K EMQ G + +++ A
Sbjct: 283 MKKERCRTNTETYTLMINVYGK----SKQPMSAMKIFNEMQSIGCKANICTYTALVNAFA 338
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP 403
+EG E AE+ + ++ ++ + A+ MEAY++ G + EIF MQ
Sbjct: 339 REGLCEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRA 398
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC 463
+Y+ +++ +A E+ + + GM P M S++ L + + G R ++
Sbjct: 399 SYNILVDAYGRAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQ- 457
Query: 464 LEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
L K RP+ L + AG ++ E + M D + S N+ ++AY +G
Sbjct: 458 LHKSGLRPDTFALNAMLHAYARAGRLDDMERLLAAM--DLAGSADVGSHNVAVNAYARAG 515
Query: 522 DFVKAEKIYD 531
+ E ++
Sbjct: 516 YLGRMEAAFE 525
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 146/323 (45%), Gaps = 16/323 (4%)
Query: 162 TGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHIL 221
T +++ WM + H + ++ + K +F+ ++ G +P+ +T++ L
Sbjct: 433 TALKIFHWM-EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 491
Query: 222 IVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAE 280
I YL+ +G ++ A + + M + G +P +N L G SK+ L+ A
Sbjct: 492 INGYLT---KGNVNNAARLLDLMKE-NGCEPDEWTYNELV-------SGFSKWGKLESAS 540
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
F F ++ GL Y+ LI HS +D +SLL++ M++ G E +V+
Sbjct: 541 FYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIA-LSLLER-MEEMGCNPNVESYNAVIN 598
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
+KE +AEK ++ E + ++ + G + +IF +M++R
Sbjct: 599 GLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLP 658
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
++ Y +I LC+ + + E L+KE G+ P ++ +L + ++ LG D L
Sbjct: 659 NLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLL 718
Query: 461 SECLE-KCRPNRTIYGIYLESLK 482
++ C+PN Y + L+ L+
Sbjct: 719 RRMVDVGCKPNYRTYSVLLKGLQ 741
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 145/377 (38%), Gaps = 48/377 (12%)
Query: 158 RENETGFRVYEWMMQQHWYRFDFAL--ATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R E RV +++ + F F+L L + K R+++ ++N G PS
Sbjct: 181 RNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSL 240
Query: 216 MTFHILI----------------------------VAYLSAPVQGC----LDEACSIYNR 243
+TF+ LI Y S + C LD A +++R
Sbjct: 241 LTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDR 300
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M++ G P +++L L ++ + +A + ++ G+E +Y+ +
Sbjct: 301 MVK-EGCDPNSVTYSTLINGLCNEG------RVDEALDMLEEMIEKGIE--PTVYTYTLP 351
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ + +E L M++ G + +++ ++ G +E A + ++L+
Sbjct: 352 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 411
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
T + + G F +L+IF M+ A+ Y++II+ LC + E
Sbjct: 412 VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 471
Query: 424 LMKEFVETGMKPLMPSYINLTNMYL---NLGMHDRLHLAFSECLEKCRPNRTIYGIYLES 480
L ++ ++ G P + +Y L N YL N+ RL E C P+ Y +
Sbjct: 472 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE--NGCEPDEWTYNELVSG 529
Query: 481 LKNAGNIEKAEEIFNHM 497
G +E A F M
Sbjct: 530 FSKWGKLESASFYFQEM 546
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 176/431 (40%), Gaps = 46/431 (10%)
Query: 127 KGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKL 186
KG + ++ L+ Q K +AVH ++ E+ + + W+ ++ +Y+ + +
Sbjct: 103 KGSSELKQLSPQLK--AHHVAEIVAVH----KDTESVIQFFYWISKRPFYKHNMNCFISM 156
Query: 187 ADYMGKERKFA-----------KCR---------DIFDDIINQGRVPSEMTFHILIVAYL 226
+ + ++R FA CR D ++I G S + + L++
Sbjct: 157 LNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLA 216
Query: 227 SAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNL 286
+ ++ A ++Y +M+ G QP N+L L SK G + ++AE I +
Sbjct: 217 KFEM---VEGARNLYKQMLN-SGIQPSLLTFNTLINIL-SKKGKV-----REAELILSQI 266
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEG 346
L Y+ LI H N+D + + M + G + +++ EG
Sbjct: 267 FQYDLSPDVFTYTSLILGHCRNRNLDLA-FGVFDR-MVKEGCDPNSVTYSTLINGLCNEG 324
Query: 347 DVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPA 404
V++A ++E GI + Y + A I +++E+ M++R +V
Sbjct: 325 RVDEALDMLEEMIEK--GIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQT 382
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
Y +I L + + E+ L + ++ G+ P +Y L N L +G L +
Sbjct: 383 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALIN-ELCVGGRFSTALKIFHWM 441
Query: 465 EK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
E N Y ++ L G+IEKA +F M + + N +++ YL+ G+
Sbjct: 442 EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPT-VVTYNTLINGYLTKGN 500
Query: 523 FVKAEKIYDLM 533
A ++ DLM
Sbjct: 501 VNNAARLLDLM 511
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 138/332 (41%), Gaps = 21/332 (6%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M++ R + T L + + K ++ ++ +G VP+ +T++ LI V
Sbjct: 371 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC---V 427
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G A I++ M + G +N + + L GG +++A +F +L G
Sbjct: 428 GGRFSTALKIFHWM-EGHGSLANTQTYNEIIKGLCL--GG----DIEKAMVLFEKMLKMG 480
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
Y+ LI + + N++ + L M++ G E + ++ +K G +E
Sbjct: 481 PLPTVVTYNTLINGYLTKGNVNNA--ARLLDLMKENGCEPDEWTYNELVSGFSKWGKLES 538
Query: 351 AEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
A + ++E P P ++ ++ ++K G+ +L + M+E + +V +Y+ +I
Sbjct: 539 ASFYFQEMVECGLN-PNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVI 597
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE---- 465
L K E + + E G L+P+ I T + L + R AF +
Sbjct: 598 NGLSKENRFSEAEKICDKMAEQG---LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR 654
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
KC PN Y + L G ++AE + M
Sbjct: 655 KCLPNLYTYSSLIYGLCQEGKADEAEILLKEM 686
Score = 39.3 bits (90), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 107/243 (44%), Gaps = 27/243 (11%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
+ +E K + + ++ +G P E+TF LI ++ V G +D A + RM+ +G
Sbjct: 670 LCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFV---VLGRIDHAFLLLRRMVDVGC 726
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD-IYSGLIWLHSYQ 308
+P ++ L + GL K L LL + +Q + +YS ++
Sbjct: 727 -KPNYRTYSVLLK-------GLQKECL---------LLEEKVAVQHEAVYS----FSPHE 765
Query: 309 DNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
+++ E +S L M + G E + +++ ++G +AE+ ++ ++ P
Sbjct: 766 KDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQ-LVKDMKERGFCPDR 824
Query: 369 AFVYKME-AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
Y + A+ K E +L+IF ++ + + Y +I LCKA + E ++L
Sbjct: 825 EIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDN 884
Query: 428 FVE 430
+E
Sbjct: 885 MLE 887
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 16/350 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ + + K+ KF + ++ G +T++ LI AY +G L+EA I N M
Sbjct: 124 MVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCR---EGLLEEAFEIMNSMA 180
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
G +P +N++ L K +Y +A+ I +L GL Y+ L+
Sbjct: 181 D-KGLKPSLFTYNAIINGLCKK----GRY--ARAKGILIEMLNIGLSPDTTTYNTLLVES 233
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+DN + + + EM + G S++ V ++ ++ A + R ++ +
Sbjct: 234 CRRDNFSEAK--EIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQA-LVYFRDMKKFGLV 290
Query: 366 PTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
P + M Y + G +++L+I EM E+ V AY+ I+ LCK + + L
Sbjct: 291 PDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKL 350
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKN 483
E VE G P ++ L + + G M L L + +P+ Y ++
Sbjct: 351 FDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCK 410
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G +EKA E+++ M S + I N + I+++AY S G +A +++D+M
Sbjct: 411 VGEMEKASELWDGMIS-RKIFPNHITYGILINAYCSVGHVSEAFRLWDVM 459
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 74/422 (17%), Positives = 167/422 (39%), Gaps = 17/422 (4%)
Query: 114 AKLAWLCKELPSHKG-GTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQ 172
A + LCK+ + G L+ +LN T L C R +E ++ M++
Sbjct: 193 AIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAK-EIFGEMLR 251
Query: 173 QHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQG 232
Q D + L + R + F D+ G VP + + +L+ Y G
Sbjct: 252 QGVVP-DLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCR---NG 307
Query: 233 CLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLE 292
+ EA I + M++ G + +N++ L + L A+ +F ++ G
Sbjct: 308 NMLEALKIRDEMLEQGCVLDVIA-YNTILNGLCKEK------MLTDADKLFDEMVERG-- 358
Query: 293 IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
D Y+ +H + + + + L M Q + +++ K G++E A
Sbjct: 359 ALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKAS 418
Query: 353 KTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+ W ++ + + AY +G ++ ++ M E+ ++ + +I+
Sbjct: 419 ELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGY 478
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNR 471
C++ ++ + + + G+ P SY L N ++ D+ L ++ E P+
Sbjct: 479 CRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDI 538
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
Y + + G +++AE + M ++ I + + +++ +++ + +A + +D
Sbjct: 539 ITYNVVMNGFCRQGRMQEAELVLRKM-IEKGINPDRSTYTALINGHVTQDNLNEAFRFHD 597
Query: 532 LM 533
M
Sbjct: 598 EM 599
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 121/275 (44%), Gaps = 13/275 (4%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
+ GFR+ + M++ R D + L + + KE K +FD++ +G +P+++ F
Sbjct: 292 DEGFRL-KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
LI + G +D Y +M+ G QP L+N+L K G L A
Sbjct: 351 LIHGHSR---NGEIDLMKESYQKMLS-KGLQPDIVLYNTLVNGFC-KNGDLV-----AAR 400
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
I ++ GL K Y+ LI + D E ++KEM Q G E + +++
Sbjct: 401 NIVDGMIRRGLRPDKITYTTLI--DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVC 458
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
KEG V DAE+ +L + + M+A+ K G+ ++ +EMQ
Sbjct: 459 GMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
SV Y+ ++ LCK + + + L+ + G+ P
Sbjct: 519 SVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVP 553
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 123/313 (39%), Gaps = 13/313 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + KE + + +FD+I + P+ ++F+ LI Y G LDE + ++M
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKV---GNLDEGFRLKHQM- 301
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ +P +++L AL + + A +F + GL I++ LI H
Sbjct: 302 EKSRTRPDVFTYSALINALCKE------NKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
S ID + S K M G + + +++ K GD+ A ++
Sbjct: 356 SRNGEIDLMKESYQK--MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
+ ++ + + G+ +LEI +EM + + ++ +CK E +
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-PNRTIYGIYLESLKNA 484
+E + G+KP +Y + + + G E P+ Y + L L
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL 533
Query: 485 GNIEKAEEIFNHM 497
G ++ A+ + + M
Sbjct: 534 GQMKNADMLLDAM 546
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 73/177 (41%), Gaps = 1/177 (0%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
E+ AGF V ++ KEG++ DA+K + + + +F + Y K+G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ + +M++ V Y +I LCK + + L E + G+ P +
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
L + + G D + ++ + L K +P+ +Y + G++ A I + M
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 148/345 (42%), Gaps = 18/345 (5%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+I E+E + E M+ F A ++ Y +E F+ + + + P
Sbjct: 465 QIGESERASGLLEQMIADGLKPNAFVYAPLISGYC-REGSFSLACETLKKMTRENLTPDL 523
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
++ LI+ + G +DEA Y+ M++ G+QP + L S G L K
Sbjct: 524 YCYNSLIIGLSNV---GKMDEAIEYYDEMLE-KGFQPNDFTYGGLIHGY-SMAGNLEK-- 576
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
AE + H +L SGL IY+ ++ + DN+ E++S K M + G +
Sbjct: 577 ---AEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNL--EKVSSTLKSMLEKGLMPDNRLY 631
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM 393
V+ + G ++ A + L ++E NG+ + +Y + + K + K++ + EM
Sbjct: 632 GIVIHNLSSSGHMQ-AAVSVLSVIEK-NGLVPDSLIYGSLISGFCKAADMEKAVGLLDEM 689
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-M 452
++ + Y+ +I+ CK+++ ++ + G+ P +Y L + Y G +
Sbjct: 690 AKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDI 749
Query: 453 HDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
D + L E P+ +Y + N+G++++A I M
Sbjct: 750 RDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEM 794
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 141/344 (40%), Gaps = 52/344 (15%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K R + + +++ G + +T++ LI A G ++EA Y + ++ G
Sbjct: 255 KVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRA---GAIEEAFG-YKKEMEDYGLV 310
Query: 252 PRPSLHNSLFRALV--SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
P + ++ L +P QA+ + + +GL +YS LI Q
Sbjct: 311 PDGFTYGAIINGLCKRGRP--------DQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQG 362
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
N D E ++K EM AG + K +++R K G + A + ++ + T
Sbjct: 363 NAD-EAFKIVK-EMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMT 420
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
+ +E + + ++ + EM++ S +V Y II LC+ E+E L+++ +
Sbjct: 421 YNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMI 480
Query: 430 ETGMK-------PLMPSYI------------------NLT-NMYL---------NLGMHD 454
G+K PL+ Y NLT ++Y N+G D
Sbjct: 481 ADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMD 540
Query: 455 RLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ E LEK +PN YG + AGN+EKAE++ + M
Sbjct: 541 EAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQM 584
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 3/139 (2%)
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
GI + Y +EAY K+ + + ++ EM+E S +V Y+ +I LC+A E
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE-CLEKCRPNRTIYGIYLES 480
KE + G+ P +Y + N G D+ E PN +Y ++
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDG 357
Query: 481 LKNAGNIEKAEEIFNHMHS 499
GN ++A +I M +
Sbjct: 358 FMRQGNADEAFKIVKEMSA 376
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 176/411 (42%), Gaps = 28/411 (6%)
Query: 130 TLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADY 189
+L +I A W +D +AV R+ E V EW++ + +R D L D
Sbjct: 118 SLDKIPQAHDLW---DDIVNVAVQLRLNRQWEPIITVCEWILYRSSFRPDIICYNLLIDA 174
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
G++R+ K I+ ++ VP+E T+ +L+ AY ++ G L A + + M Q G
Sbjct: 175 YGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNS---GQLHRAEGVISEM-QKNG 230
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
P +++N+ L L ++A ++ + + Y+ +I ++
Sbjct: 231 LPPTATVYNAYLDGL------LKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKA- 283
Query: 310 NIDKERISLLK--KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
K+ +S LK EM+ G + +++ A+EG E AE+ + + ++ +
Sbjct: 284 ---KQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDV 340
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
A+ MEAY++ G + EIF M+ +Y+ +++ +A + E+ +E
Sbjct: 341 YAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQE 400
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLESLKNAG 485
+ GM+P M S++ L + + G R ++ L K RP+ L + AG
Sbjct: 401 LKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQ-LHKSGLRPDTFALNAMLNAYGRAG 459
Query: 486 NIEKAEEIFNHMHSDQTIGV------NTRSCNIILSAYLSSGDFVKAEKIY 530
++ E + M +T + N++++ Y +G + E +
Sbjct: 460 RLDDMERLLGAMERGGDDDAGGGAAPDTSTYNVLVNVYGRAGYLDRMEAAF 510
>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 156/370 (42%), Gaps = 33/370 (8%)
Query: 131 LVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
+V ILN K W + +++W+ + + + + +
Sbjct: 13 VVAILNTLKSW-------------------KVALSLFKWLQAEQNFNLNIYTYNVMLKVL 53
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
+ +++ + I +D+IN G P +T+ LI Q D A + ++RM +
Sbjct: 54 RRGQQWELSQQIAEDMINAGIRPDNITYSTLISCANRCNYQ---DAAMAWFDRM-----H 105
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
+ + ++ G + KY +A ++ ++ SG + K Y ++ L
Sbjct: 106 DAQCVPDAVTYSTMIDVYGKVGKY--DEAVALYESVKKSGWKPDKVTYGTMVRLFGRAGY 163
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
I +S+ EM+ +G + G V ++ + G + A K + + ++
Sbjct: 164 ISAA-VSIF-DEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQAGVKPNAVTL 221
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
ME Y++ G+ M+ L IF M++ L + + Y+ +I++ +A E ++E VE
Sbjct: 222 STVMEIYSRSGKVMEGLGIFHHMRQDL-ACDIIVYNAVIKMCREAGLVPEAEQYLREMVE 280
Query: 431 TGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEK 489
G +P +Y N+ ++Y GM FS+ +E +P+ Y L+ NA + EK
Sbjct: 281 YGHQPNDWTYRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVMSYTSLLQGYGNAKDYEK 340
Query: 490 AEEIFNHMHS 499
+EI + M S
Sbjct: 341 VQEILHEMVS 350
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 10/198 (5%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM-EAY 377
+ ++M AG + S L CA + +DA W + +P M + Y
Sbjct: 65 IAEDMINAGIRP-DNITYSTLISCANRCNYQDAAMAWFDRMHDAQCVPDAVTYSTMIDVY 123
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
K+G++ +++ ++ +++ Y ++ L +A S+ E +G++P
Sbjct: 124 GKVGKYDEAVALYESVKKSGWKPDKVTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGS 183
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
Y + + G F E + +PN +E +G + + IF+H
Sbjct: 184 VVYNIMISCLGRAGRMGHALKVFQEMKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHH 243
Query: 497 MHSDQTIGVNTRSCNIIL 514
M D +C+II+
Sbjct: 244 MRQD-------LACDIIV 254
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 146/329 (44%), Gaps = 18/329 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ G +P T+ LI +Y G D A IY RM++ G Y P S +N++
Sbjct: 422 VFKEMKKAGYIPERDTYVSLISSYSRC---GLFDLAMQIYKRMMEAGIY-PDVSTYNAVL 477
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
AL GG +QAE +F + + + D YS LH+Y + +++ L
Sbjct: 478 SALAR--GG----RWEQAEKLFAEM--EERDCKPDEYSYSSLLHAYANAKRLDKMKALSD 529
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
++ E ++ +++ V +K ++ +AEK +L L + + + Y K
Sbjct: 530 DIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNR 589
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
K +I M+E + S Y+ ++ + + + E E+++ E +G++P SY
Sbjct: 590 MVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYN 649
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEKC---RPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
+ Y G FSE KC +P+ Y I+++S + E+A E+ +M
Sbjct: 650 TVIYAYGRKGQMKEASRLFSEM--KCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMV 707
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
+ Q N R+ N I+ Y +G A+
Sbjct: 708 T-QGCKPNERTYNSIVEGYCRNGKLTDAK 735
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 155/395 (39%), Gaps = 41/395 (10%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M++H D L + + + +FD++ G P ++TF+ L+ Y A
Sbjct: 216 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 275
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF--------- 281
DEA + M ++G P +NSL + V K G L + + E
Sbjct: 276 H---DEAIEVIQEMERVGC-PPSVVTYNSLISSYV-KDGLLEQAVALKQEMEVKGMKPDV 330
Query: 282 IFHNLLTSGLEIQKDI---------------------YSGLIWLHSYQDNIDKERISLLK 320
+ + L SGL+ I Y+ LI +H + E +++
Sbjct: 331 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKF-PEMMAVF- 388
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
E + AGF ++L V + G + + + ++ +V + +Y++
Sbjct: 389 DEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRC 448
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G F +++I++ M E V Y+ ++ L + E E L E E KP SY
Sbjct: 449 GLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSY 508
Query: 441 INLTNMYLNLGMHDRLHLAFSECL--EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
+L + Y N D++ A S+ + E+ P+ + + N+ +AE+ F +
Sbjct: 509 SSLLHAYANAKRLDKMK-ALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELR 567
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ ++ N ++S Y + K EKI LM
Sbjct: 568 QKRC-SLDINVLNAMVSIYGKNRMVRKVEKILSLM 601
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 104/248 (41%), Gaps = 6/248 (2%)
Query: 254 PSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
P + ALVS ++ + A +F ++ SG++ Y+ ++ ++S K
Sbjct: 150 PGPDAGAYTALVSAFSRAGRF--RDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWK 207
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
E + L+ M++ G + +++ C + ++A + + + S F
Sbjct: 208 EVVELVA-SMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSL 266
Query: 374 MEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++ Y K +++E+ +EM ER+G SV Y+ +I K E +L +E G
Sbjct: 267 LDVYGKARRHDEAIEVIQEM-ERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG 325
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAE 491
MKP + +Y L + G D + + E + C+PN Y ++ G +
Sbjct: 326 MKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMM 385
Query: 492 EIFNHMHS 499
+F+ S
Sbjct: 386 AVFDEFRS 393
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 91/216 (42%), Gaps = 19/216 (8%)
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
E ++ +E+ G VL + +RV A+ G + +A LL++ G A+
Sbjct: 105 ELAAVAARELHGEGVLHHPRVLATAIRVMARAGRLAEASA----LLDAAPGPDAGAYTAL 160
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCK-----AEETELTESLMKEF 428
+ A+++ G F ++ +FR M + ++ Y+ ++ + K E EL S+
Sbjct: 161 VSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMK--- 217
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNI 487
E G+ P +Y L + ++ F E P++ + L+ A
Sbjct: 218 -EHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRH 276
Query: 488 EKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSG 521
++A E+ M + +G + + N ++S+Y+ G
Sbjct: 277 DEAIEVIQEM---ERVGCPPSVVTYNSLISSYVKDG 309
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 151/337 (44%), Gaps = 14/337 (4%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
R++FD++ +G P+E TF IL+ Y A G D+ + N M G P ++N+
Sbjct: 167 RELFDEMPEKGCKPNEFTFGILVRGYCKA---GLTDKGLELLNAMESFG-VLPNKVIYNT 222
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI-DKERISL 318
+ + + +E + + GL ++ I + + D RI
Sbjct: 223 IVSSFCREGRN------DDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFS 276
Query: 319 LKKEMQQAGFEEGKEVLLSV-LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
+ + G + ++ L+ K G +EDA+ + + E+D+ ++ ++
Sbjct: 277 DMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGL 336
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
+ G+F+++ + ++M ++ S+ +Y+ +++ LCK ++++ G+ P
Sbjct: 337 VRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDA 396
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+Y L + Y ++G D E + C PN I L SL G I +AEE+
Sbjct: 397 VTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRK 456
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M+ ++ G++T +CNII+ SG+ KA +I M
Sbjct: 457 MN-EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Query: 377 YAKIGEFMKSLEIFREMQERL--GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
+AK K+ F+ ++ R SV Y+ ++E K E L K+ V G+
Sbjct: 85 FAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIA 144
Query: 435 PLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEI 493
P ++ L + D F E EK C+PN +GI + AG +K E+
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 494 FNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIYDLM 533
N M S GV N N I+S++ G +EK+ + M
Sbjct: 205 LNAMES---FGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKM 243
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%)
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+ EM+E+ S ++ Y+ I+ LC+ E+ E +L+ E ++ + P + S+ L +
Sbjct: 616 LMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFC 675
Query: 449 NLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ D F + C +Y + L AG + KA E+
Sbjct: 676 KVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELL 721
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 10/163 (6%)
Query: 374 MEAYAKIGEFMKSLEIFREMQ-ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
+ K G F ++ +F EM E+L SV AY+ I CK + ++K+ + G
Sbjct: 531 LNGLCKAGRFAEAKNLFAEMMGEKLQPDSV-AYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Query: 433 MKPLMPSYINLTNMYLNLGMHDR---LHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIE 488
+ +Y ++ L LG+ ++ +H E EK PN Y ++ L +E
Sbjct: 590 CHKSLETY---NSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVE 646
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
A + + M + I N S ++ A+ DF A+++++
Sbjct: 647 DATNLLDEMMQ-KNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688
>gi|224081220|ref|XP_002306340.1| predicted protein [Populus trichocarpa]
gi|222855789|gb|EEE93336.1| predicted protein [Populus trichocarpa]
Length = 416
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 158/390 (40%), Gaps = 40/390 (10%)
Query: 131 LVRILNAQKKWLRQEDGTYLAVHCMRIRENETG--------FRVYEWMMQQHWYRFDFAL 182
LV+ LN K +R E HC + E E G V+ WM +Q WY D
Sbjct: 40 LVKTLNKYVKVMRTE-------HCFMLFE-ELGKTDKWLQCLEVFRWMQKQRWYVADNGC 91
Query: 183 ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQG-CLDEACSIY 241
+KL MGK+ + +F ++ N G P ++ LI A+L + + L +A + +
Sbjct: 92 YSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKSLTKALAYF 151
Query: 242 NRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
+M + QP +N + RA + Q +F +L S + DIY+
Sbjct: 152 EKMKSIERCQPNVVTYNIILRAFAQARN------VNQVNALFKDLEESI--VSPDIYTYN 203
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS---VLRVCAKEGDVEDAEKTWLRL 358
L +Y N I ++ + + ++ K +++ ++ K+ D E E+ + L
Sbjct: 204 GVLDAYGKN---GMIREMESVLSRMKIDQCKPDIITFNLLIDSYGKKQDFEKMEQVFKSL 260
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
L S P F + Y K K+ +F++M + + S + +I + +
Sbjct: 261 LRSKEKPTLPTFNSMIVNYGKARLKDKAESVFKKMADMRYTPSFITFESLIMMYGICDCV 320
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-----PNRTI 473
+ + VE+G + + + + N+Y G+H H+ LE R PN +
Sbjct: 321 SKARDIFDDMVESGKEVKVSTLNAVLNVYCMNGLHMEAHIL----LENARSIGVPPNSST 376
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
Y + + A E +++ HM D I
Sbjct: 377 YKLLYRAYTKAKMKELVQKLLKHMDKDGII 406
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 146/329 (44%), Gaps = 18/329 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ G +P T+ LI +Y G D A IY RM++ G Y P S +N++
Sbjct: 440 VFKEMKKAGYIPERDTYVSLISSYSRC---GLFDLAMQIYKRMMEAGIY-PDVSTYNAVL 495
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
AL GG +QAE +F + + + D YS LH+Y + +++ L
Sbjct: 496 SALAR--GG----RWEQAEKLFAEM--EERDCKPDEYSYSSLLHAYANAKRLDKMKALSD 547
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
++ E ++ +++ V +K ++ +AEK +L L + + + Y K
Sbjct: 548 DIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNR 607
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
K +I M+E + S Y+ ++ + + + E E+++ E +G++P SY
Sbjct: 608 MVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYN 667
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEKC---RPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
+ Y G FSE KC +P+ Y I+++S + E+A E+ +M
Sbjct: 668 TVIYAYGRKGQMKEASRLFSEM--KCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMV 725
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
+ Q N R+ N I+ Y +G A+
Sbjct: 726 T-QGCKPNERTYNSIVEGYCRNGKLTDAK 753
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 156/395 (39%), Gaps = 41/395 (10%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M++H D L + + + +FD++ G P ++TF+ L+ Y A
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 293
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF--------- 281
DEA + M ++G P +NSL + V K G L + + E
Sbjct: 294 H---DEAIEVIQEMERVGC-PPSVVTYNSLISSYV-KDGLLEQAVALKQEMEVKGIKPDV 348
Query: 282 IFHNLLTSGLEIQKDI---------------------YSGLIWLHSYQDNIDKERISLLK 320
+ + L SGL+ I Y+ LI +H + E +++
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKF-PEMMAVF- 406
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
E++ AGF ++L V + G + + + ++ +V + +Y++
Sbjct: 407 DELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRC 466
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G F +++I++ M E V Y+ ++ L + E E L E E KP SY
Sbjct: 467 GLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSY 526
Query: 441 INLTNMYLNLGMHDRLHLAFSECL--EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
+L + Y N D++ A S+ + E+ P+ + + N+ +AE+ F +
Sbjct: 527 SSLLHAYANAKRLDKMK-ALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELR 585
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ ++ N ++S Y + K EKI LM
Sbjct: 586 QKRC-SLDINVLNAMVSIYGKNRMVRKVEKILSLM 619
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 105/248 (42%), Gaps = 6/248 (2%)
Query: 254 PSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
P + ALVS ++ + A +F ++ SG++ Y+ ++ ++S K
Sbjct: 168 PGPDAGAYTALVSAFSRAGRF--RDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWK 225
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
E + L+ M++ G + +++ C + ++A + + + S F
Sbjct: 226 EVVELVA-SMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSL 284
Query: 374 MEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++ Y K +++E+ +EM ER+G SV Y+ +I K E +L +E G
Sbjct: 285 LDVYGKARRHDEAIEVIQEM-ERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG 343
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAE 491
+KP + +Y L + G D + + E + C+PN Y ++ G +
Sbjct: 344 IKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMM 403
Query: 492 EIFNHMHS 499
+F+ + S
Sbjct: 404 AVFDELRS 411
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 88/209 (42%), Gaps = 19/209 (9%)
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
+E+ G VL + +RV A+ G + +A LL++ G A+ + A+++
Sbjct: 130 RELHGEGVLHHPRVLATAIRVMARAGRLAEASA----LLDAAPGPDAGAYTALVSAFSRA 185
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCK-----AEETELTESLMKEFVETGMKP 435
G F ++ +FR M + ++ Y+ ++ + K E EL S+ E G+ P
Sbjct: 186 GRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMK----EHGVAP 241
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+Y L + ++ F E P++ + L+ A ++A E+
Sbjct: 242 DRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVI 301
Query: 495 NHMHSDQTIGV--NTRSCNIILSAYLSSG 521
M + +G + + N ++S+Y+ G
Sbjct: 302 QEM---ERVGCPPSVVTYNSLISSYVKDG 327
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 146/329 (44%), Gaps = 18/329 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ G +P T+ LI +Y G D A IY RM++ G Y P S +N++
Sbjct: 440 VFKEMKKAGYIPERDTYVSLISSYSRC---GLFDLAMQIYKRMMEAGIY-PDVSTYNAVL 495
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
AL GG +QAE +F + + + D YS LH+Y + +++ L
Sbjct: 496 SALAR--GG----RWEQAEKLFAEM--EERDCKPDEYSYSSLLHAYANAKRLDKMKALSD 547
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
++ E ++ +++ V +K ++ +AEK +L L + + + Y K
Sbjct: 548 DIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNR 607
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
K +I M+E + S Y+ ++ + + + E E+++ E +G++P SY
Sbjct: 608 MVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYN 667
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEKC---RPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
+ Y G FSE KC +P+ Y I+++S + E+A E+ +M
Sbjct: 668 TVIYAYGRKGQMKEASRLFSEM--KCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMV 725
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
+ Q N R+ N I+ Y +G A+
Sbjct: 726 T-QGCKPNERTYNSIVEGYCRNGKLTDAK 753
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 155/395 (39%), Gaps = 41/395 (10%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M++H D L + + + +FD++ G P ++TF+ L+ Y A
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 293
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF--------- 281
DEA + M ++G P +NSL + V K G L + + E
Sbjct: 294 H---DEAIEVIQEMERVGC-PPSVVTYNSLISSYV-KDGLLEQAVALKQEMEVKGMKPDV 348
Query: 282 IFHNLLTSGLEIQKDI---------------------YSGLIWLHSYQDNIDKERISLLK 320
+ + L SGL+ I Y+ LI +H + E +++
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKF-PEMMAVF- 406
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
E + AGF ++L V + G + + + ++ +V + +Y++
Sbjct: 407 DEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRC 466
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G F +++I++ M E V Y+ ++ L + E E L E E KP SY
Sbjct: 467 GLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSY 526
Query: 441 INLTNMYLNLGMHDRLHLAFSECL--EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
+L + Y N D++ A S+ + E+ P+ + + N+ +AE+ F +
Sbjct: 527 SSLLHAYANAKRLDKMK-ALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELR 585
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ ++ N ++S Y + K EKI LM
Sbjct: 586 QKRC-SLDINVLNAMVSIYGKNRMVRKVEKILSLM 619
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 104/248 (41%), Gaps = 6/248 (2%)
Query: 254 PSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
P + ALVS ++ + A +F ++ SG++ Y+ ++ ++S K
Sbjct: 168 PGPDAGAYTALVSAFSRAGRF--RDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWK 225
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
E + L+ M++ G + +++ C + ++A + + + S F
Sbjct: 226 EVVELVA-SMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSL 284
Query: 374 MEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++ Y K +++E+ +EM ER+G SV Y+ +I K E +L +E G
Sbjct: 285 LDVYGKARRHDEAIEVIQEM-ERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG 343
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAE 491
MKP + +Y L + G D + + E + C+PN Y ++ G +
Sbjct: 344 MKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMM 403
Query: 492 EIFNHMHS 499
+F+ S
Sbjct: 404 AVFDEFRS 411
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 88/209 (42%), Gaps = 19/209 (9%)
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
+E+ G VL + +RV A+ G + +A LL++ G A+ + A+++
Sbjct: 130 RELHGEGVLHHPRVLATAIRVMARAGRLAEASA----LLDAAPGPDAGAYTALVSAFSRA 185
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCK-----AEETELTESLMKEFVETGMKP 435
G F ++ +FR M + ++ Y+ ++ + K E EL S+ E G+ P
Sbjct: 186 GRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMK----EHGVAP 241
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+Y L + ++ F E P++ + L+ A ++A E+
Sbjct: 242 DRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVI 301
Query: 495 NHMHSDQTIGV--NTRSCNIILSAYLSSG 521
M + +G + + N ++S+Y+ G
Sbjct: 302 QEM---ERVGCPPSVVTYNSLISSYVKDG 327
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 157/360 (43%), Gaps = 21/360 (5%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
V EW++ + +R D L + GK+R+ K I+ ++ VP+E T+ +L+ AY
Sbjct: 161 VCEWILYRSSFRPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAY 220
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHN 285
+A G L A + + M + G P +++N+ L L ++A ++
Sbjct: 221 CNA---GSLHRAEGVISEMRE-HGIPPNATVYNAYLDGL------LKARCTEKAVEVYQR 270
Query: 286 LLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK--KEMQQAGFEEGKEVLLSVLRVCA 343
+ + ++ +I ++ K+ +S +K EM+ G + +++ A
Sbjct: 271 MKRERCRANTETFTLMINVYGKA----KQPMSSMKVFNEMKSIGCKPNICTYTALVNAFA 326
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP 403
+EG E AE+ + + ++ + A+ MEAY++ G + EIF MQ
Sbjct: 327 REGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRA 386
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC 463
+Y+ +++ +A E E++ +E + GM P M S++ L + G R ++
Sbjct: 387 SYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQ- 445
Query: 464 LEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
L K P+ L + AG ++ E +F M V T N+ ++AY +G
Sbjct: 446 LHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRGDADVGTY--NVAVNAYGRAG 503
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 173/391 (44%), Gaps = 33/391 (8%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R+R + + EW++Q ++ D L D GK +++ + F + + +P+E
Sbjct: 59 RLRNWRSVILILEWILQGTMFKPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTE 118
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP---------SLHNSLFRALVS 266
+F++L+ AY S VQ L++A +++ M + Y P + +N+ L
Sbjct: 119 TSFNVLLAAY-SRGVQ--LEKAEKLFHEMKE-SNYSPGTVEWMIFSGIATYNTYLEVL-G 173
Query: 267 KPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHS---YQDNIDKERISLLKKEM 323
K G LS QAE F ++ G+ + ++ +I ++ Y D D L + M
Sbjct: 174 KSGRLS-----QAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADD-----LFRSM 223
Query: 324 QQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIG 381
++A +++ A+EG+ AE+ + L+S IP + Y +EAY++
Sbjct: 224 RKALCPPNLYTYTALMNAHAREGNCVRAEEIFAE-LQSVGFIPD-VYTYNALLEAYSRGE 281
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ E+F+ M E +Y+ +I+ +A T +++ E G KP M S++
Sbjct: 282 HPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHM 341
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
L + Y G E +P+ ++ L + N+G I++ E + M S
Sbjct: 342 LLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSS 401
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
+ + N +++AY G KAE++++
Sbjct: 402 -VAKPDISTLNTLINAYAQGGYIEKAEEVFN 431
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 141/367 (38%), Gaps = 54/367 (14%)
Query: 168 EWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLS 227
EWM+ ++ L + +GK + ++ D F D+ QG +P+ TF I+I Y
Sbjct: 155 EWMIFSGIATYNTYL-----EVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGK 209
Query: 228 APVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLL 287
A D+A ++ R ++ P + +L A + + +AE IF L
Sbjct: 210 AYYS---DKADDLF-RSMRKALCPPNLYTYTALMNAHAREGNCV------RAEEIFAELQ 259
Query: 288 TSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGD 347
+ G D+Y+ L +Y + + M +AG + ++ + G
Sbjct: 260 SVGF--IPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGL 317
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
DA+ + + E+ + + + +YAK G K
Sbjct: 318 TADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAG-------------------------K 352
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH-LAFSECLEK 466
+ E E L++E +G+KP + +L + Y N G D + L S
Sbjct: 353 VTE----------AERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSV 402
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
+P+ + + + G IEKAEE+FN + S + + + S ++ AY F K
Sbjct: 403 AKPDISTLNTLINAYAQGGYIEKAEEVFNSLES-KGLTPDVMSWTSLMGAYAQRKLFRKC 461
Query: 527 EKIYDLM 533
I+ M
Sbjct: 462 VSIFQKM 468
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/483 (19%), Positives = 200/483 (41%), Gaps = 39/483 (8%)
Query: 59 KDSSQEEKWDMFKNSDAESGSVDFDVGTAGSEMRHLGEPVVEVIE----LEELPEQWRRA 114
K+ S +K F ++ + + SVD D + M + P ++E L + + + +
Sbjct: 53 KNPSLPKKNGGFASNSSNTISVD-DALASFYRMARM-NPRPSIVEFGKFLGSIAKMKQYS 110
Query: 115 KLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEW-MMQQ 173
+ +LC ++ V LN + ++C+ R N F V W M +
Sbjct: 111 TVVYLCNQMDLFGVTHTVYSLN-------------ILINCL-CRLNHVDFAVSVWGKMFK 156
Query: 174 HWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGC 233
+ D T L + + E K +++++++ G P ++++ LI ++ G
Sbjct: 157 LGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNS---GN 213
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
+ A ++ +M Q G +P +N++ +L + A ++ G+
Sbjct: 214 TNMAVHVFKKMEQ-NGCKPNVVTYNTIIDSLCKD------RLVNDAMDFLSEMVGRGIPP 266
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
Y+ ++ H + L K M+Q G + ++ K+ V DA
Sbjct: 267 DAITYNSIV--HGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAAD 324
Query: 354 TWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
++ D GIP Y + +G+ +++ +F++M+++ V AY+ II+
Sbjct: 325 FLSEMV--DQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDS 382
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPN 470
LCK + E V+ G+ P +Y + + + NLG D F E + + PN
Sbjct: 383 LCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPN 442
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+ I ++ L G + +A +F M +++ + N + N +++ Y +A K++
Sbjct: 443 TLTFSILVDGLCQEGMVSEARWVFETM-TEKGVEPNIYTYNALMNGYCLRCKMNEARKVF 501
Query: 531 DLM 533
++M
Sbjct: 502 EIM 504
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 79/391 (20%), Positives = 151/391 (38%), Gaps = 57/391 (14%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI--VAYLSA 228
M+Q+ + D + D + K+R D ++++QG P +T+ ++ + YL
Sbjct: 294 MEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYL-- 351
Query: 229 PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
G L+EA ++ +M Q G +P +N++ +L + EF+ ++
Sbjct: 352 ---GQLNEAIRLFKKMEQ-KGCKPDVVAYNTIIDSLCK-----DRLVNDAMEFL-SEMVD 401
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
G+ YS + LH + + + + L KEM ++ +EG V
Sbjct: 402 RGIPPNAVTYSTI--LHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMV 459
Query: 349 EDAEKTWLRLLESDNGIPTPAFVY-----------KMEAYAKIGEFM------------- 384
+A W+ ++ G+ + Y KM K+ E M
Sbjct: 460 SEAR--WVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYN 517
Query: 385 -------------KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
K+ + +M + + + Y+ I++ LC + L K+ +
Sbjct: 518 ILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSS 577
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKA 490
GM P + +Y L N G D F E K P+ +Y I +E + G +E A
Sbjct: 578 GMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVA 637
Query: 491 EEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
+ +F+ + +D I R+ N+++ L G
Sbjct: 638 KGLFSKLSADG-IQPPGRTYNVMIKGLLKEG 667
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 46/259 (17%), Positives = 110/259 (42%), Gaps = 12/259 (4%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F +++ + +P+ +TF IL+ +G + EA ++ M + G +P +N+L
Sbjct: 430 LFKEMVGRNVMPNTLTFSILVDGLCQ---EGMVSEARWVFETMTE-KGVEPNIYTYNALM 485
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
G + + +A +F ++ G D++S I ++ Y ++ ++ L
Sbjct: 486 N------GYCLRCKMNEARKVFEIMVGKG--CAPDLHSYNILINGYCNSRRMDKAKALLT 537
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
+M ++++ G + DA++ + ++ S + + K G
Sbjct: 538 QMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHG 597
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
++L++F+ M+E+ + Y +IE + + E+ + L + G++P +Y
Sbjct: 598 HLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYN 657
Query: 442 NLTNMYLNLGMHDRLHLAF 460
+ L G+ D + F
Sbjct: 658 VMIKGLLKEGLSDEAYELF 676
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 161/351 (45%), Gaps = 16/351 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + + K+ + + +++ ++G P +T++ ++ G + EA ++ M
Sbjct: 86 LINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCR---MGKVSEAKQFFDSMP 142
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI--YSGLIW 303
G Y P +N L AL K G ++ +A +F + + ++ D+ Y+ LI
Sbjct: 143 SRG-YSPDVVAYNGLLDALY-KEGKVA-----EAWGLFKTMDMADRKVAPDLITYNTLID 195
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ D E + L K + + G+ S+L A++ ++++AE+ + ++++S
Sbjct: 196 GFCRVEKTD-EAMKLFKDVIAK-GYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGC 253
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
+ + + ++G + LE++ EM E+ S V + +I++LCKA++ +
Sbjct: 254 APNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHK 313
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLK 482
+++E + G P + +Y L + + D+ H FS ++ C P+ Y + L L
Sbjct: 314 VLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLC 373
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ A +F+ M + + + + NI++ +G +A+ + D+M
Sbjct: 374 KTNKVHDARVLFDRMIERKLVP-DVVTFNILMDGLCKAGKLDEAKDLLDVM 423
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 114/264 (43%), Gaps = 12/264 (4%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+ +A+ +FH ++ G Y+ LI +NI ER L +EM G+E
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENI--ERAYKLLEEMASKGYEPDNITY 118
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFR--EM 393
++L + G V +A++ + + A+ ++A K G+ ++ +F+ +M
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
+R + + Y+ +I+ C+ E+T+ L K+ + G MP + ++ L L
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKG---YMPDTVTYNSILLGLARK 235
Query: 454 DRLHLA---FSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
+ A F + ++ C PN Y I L GN+ + E++ M +++ +
Sbjct: 236 SNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEM-TEKRFSPDVLL 294
Query: 510 CNIILSAYLSSGDFVKAEKIYDLM 533
CN ++ + A K+ + M
Sbjct: 295 CNAVIDMLCKAKKVDDAHKVLEEM 318
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 93/225 (41%), Gaps = 8/225 (3%)
Query: 323 MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGE 382
M + GFE +++ K G V +A + + E + ++ + G+
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
++ E+F +M ER SA+ AY+ +I LCK E E L++E G +P +Y
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 443 LTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMH-SD 500
+ + +G F + P+ Y L++L G + +A +F M +D
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWM 545
+ + + + N ++ F + EK + M L K I +M
Sbjct: 181 RKVAPDLITYNTLIDG------FCRVEKTDEAMKLFKDVIAKGYM 219
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 150/351 (42%), Gaps = 31/351 (8%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L +G + +F+ + QG P+ T+H ++ A+ SA G +DEAC I+ +
Sbjct: 139 TILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSA---GRVDEACDIFQQ 195
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI-----FHNLLTSGLEIQKDIY 298
M+Q G QP +N L A K G L + + +F+ F N +T Y
Sbjct: 196 MVQ-KGLQPDAVTYNILIDAF-GKTGQLERAF----DFVGKSRSFTNEVT---------Y 240
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+ L L S D + + L +M+ G + ++ G VED + +L +
Sbjct: 241 NSL--LSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEM 298
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
+++D ++ +K G + E+F++M+ + +A Y+ +I L +A +
Sbjct: 299 VDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKL 358
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMY---LNLGMHDRLHLAFSECLEKCRPNRTIYG 475
+ +L+ E E G P + +Y L + Y NL RL L E PN Y
Sbjct: 359 DAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKE--RGVAPNVVSYS 416
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
+E AG + A +F M + + N + N+++ + +G F A
Sbjct: 417 SLIEGFGKAGRTDAAISLFREMKA-EGCPPNHVTYNLLIDCLIRAGRFGAA 466
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
+ + L + MQ+ + ++ +++ + + +E A +T L + G PT A+ Y
Sbjct: 12 DDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQT-LAAFTKEGGRPT-AYTYS 69
Query: 374 --MEAYAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTESLMKEF 428
++ + K G+ L ++++M L + VP ++ +I+ L KA++ E ++ +
Sbjct: 70 SMIQVFMKGGDVQNGLLMYKQM---LKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDM 126
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAF-SECLEKCRPNRTIYGIYLESLKNAGNI 487
+ + P + +Y L +G D + F S + C+PN Y + + +AG +
Sbjct: 127 FKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRV 186
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
++A +IF M + + + + NI++ A+ +G +A
Sbjct: 187 DEACDIFQQM-VQKGLQPDAVTYNILIDAFGKTGQLERA 224
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 175/389 (44%), Gaps = 26/389 (6%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
+ +L + + G+ + + K + ++ + ++ LI AY ++ GC + A
Sbjct: 777 NISLYVNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAAS---GCYERAR 833
Query: 239 SIYNRMIQLGGYQPRPSLH--NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
+I+N M++ G P P++ N L +AL+ G L + Y+ + L G +I K
Sbjct: 834 AIFNTMMRDG---PSPTVDTINGLLQALIVD-GRLDELYV-----VVQELQDMGFKISKS 884
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
S L+ L ++ + + + M+ AG+ + + R+ ++ V D E
Sbjct: 885 --SILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLS 942
Query: 357 RLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
+ E+ + ++ Y I +F K++++++ ++E Y+ +I + C+
Sbjct: 943 EMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDH 1002
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYG 475
E SLM E G++P + +Y +L + + ++ F E K C+ +R+ Y
Sbjct: 1003 RPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYH 1062
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY----- 530
++ +N+G+ KAE +F+ M D + + ++++ +Y SSG +AEK+
Sbjct: 1063 TMMKIYRNSGSHSKAERLFSMMK-DAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKE 1121
Query: 531 ---DLMCLKKYEIESAWMEKLDYVLSLNR 556
+L L + A++ DY + + +
Sbjct: 1122 TGSNLSTLPYSSVIDAYLRNGDYNIGIQK 1150
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 141/355 (39%), Gaps = 51/355 (14%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKER---------------------------- 194
VYEW+ +HWY + + + + +GK
Sbjct: 203 ALEVYEWLNLRHWYSPNARMLSTILSVLGKANQEALAVEVFMRAEPSAGNTVQVYNAMMG 262
Query: 195 ------KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCL--DEACSIYNRMIQ 246
+F K +++ D + +G P ++F+ LI A L A G + + A + N ++
Sbjct: 263 VYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKA---GAMMPNLAIELLNE-VR 318
Query: 247 LGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHS 306
G +P +N+L A L++A +F ++ Q D+++ +
Sbjct: 319 RSGLRPDTITYNTLISACSRASN------LEEAAKVFDDM--EAHHCQPDLWTYNAMISV 370
Query: 307 YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
Y + L +++ GF S+L A+EG+VE ++ W +++ G
Sbjct: 371 YGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKD 430
Query: 367 TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
+ + Y K G+ +L+++R+MQ + Y +I+ L K + +M
Sbjct: 431 EMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMS 490
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLE 479
E + TG+KP + +Y L Y G F +C+ + RP+ Y + L+
Sbjct: 491 EMLNTGVKPTLKTYSALICGYAKAGKPVEAEETF-DCMLRSGIRPDHLAYSVMLD 544
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 103/229 (44%), Gaps = 20/229 (8%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M++ ++ D ++ + F K ++ I G P E T++ LIV Y
Sbjct: 944 MEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMY----- 998
Query: 231 QGCLD----EACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNL 286
C D E S+ + M ++ G +P+ +++LV+ G + ++QAE +F L
Sbjct: 999 --CRDHRPEEGFSLMHEM-RVAGLEPKLDT----YKSLVASFG--KQQLVEQAEELFEEL 1049
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEG 346
+ G ++ + Y ++ + Y+++ + L M+ AG E + ++ G
Sbjct: 1050 QSKGCKLDRSFYHTMMKI--YRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSG 1107
Query: 347 DVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
++AEK L E+ + + T + ++AY + G++ ++ +M++
Sbjct: 1108 QPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQKLIQMKK 1156
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 5/209 (2%)
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSL 387
+ +L ++L V K A + ++R E G + M YA+ G F K
Sbjct: 216 YSPNARMLSTILSVLGKANQEALAVEVFMRA-EPSAGNTVQVYNAMMGVYARRGRFNKVQ 274
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEET--ELTESLMKEFVETGMKPLMPSYINLTN 445
E+ M+ER + +++ +I KA L L+ E +G++P +Y L +
Sbjct: 275 ELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLIS 334
Query: 446 MYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
+ F + C+P+ Y + G KAE++FN + S +
Sbjct: 335 ACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLES-RGFF 393
Query: 505 VNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ S N +L A+ G+ K ++I++ M
Sbjct: 394 PDAVSYNSLLYAFAREGNVEKVKEIWEEM 422
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 84/418 (20%), Positives = 175/418 (41%), Gaps = 67/418 (16%)
Query: 159 ENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTF 218
+NE ++Y MQ D T L D +GK K A+ + +++N G P+ T+
Sbjct: 446 QNELALQLYR-DMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTY 504
Query: 219 HILIVAYLSA--PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV--SKPGGLSKY 274
LI Y A PV EA ++ M++ G +P ++ + + ++P
Sbjct: 505 SALICGYAKAGKPV-----EAEETFDCMLR-SGIRPDHLAYSVMLDIHLRFNEP------ 552
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ-AGFEEGKE 333
++A ++ +L G+ + +Y + L + + E I + ++M++ G +
Sbjct: 553 --KRAMTLYKEMLHDGITLDHSLYE--LMLRTLRKVNKVEDIGRVIRDMEEICGM--NTQ 606
Query: 334 VLLSVLRVCAKEGDVEDAEKTWLRLLESDN-GIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
+ S+L +G+ D LR SD+ I + + +Y+ G ++L++
Sbjct: 607 TISSIL----VKGECYDEAAKMLRRAISDHFEIDRENLLSILSSYSSSGRHAEALDLLEF 662
Query: 393 MQERLGSASVPAYHKIIELLCKAEETE-------------------LTESLMKEFVET-- 431
++E +S ++ +LCKA++ + + ESL++ +E
Sbjct: 663 LKEHSPRSSQMITEALVVMLCKAQQLDAALKEYSNNRELGFTGSFTMFESLIQCCLENEL 722
Query: 432 --------------GMKPLMPSYINLTNMYLNLGMHDRLH--LAFSECLEKCRPNRTIYG 475
G+K Y ++ +Y +G + H + F+E N ++Y
Sbjct: 723 ITEASQVFSDMRFCGIKASESLYESMVLLYCKMGFPETAHHLIDFAESDGILLNNISLYV 782
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+E+ +KAE + ++ + I V+ + N ++ AY +SG + +A I++ M
Sbjct: 783 NVIEAYGRLKLWQKAESVAGNLRQ-RCITVDRKVWNALIEAYAASGCYERARAIFNTM 839
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 139/323 (43%), Gaps = 18/323 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ G VP T+ LI +Y G D+A IY RMI+ G P S +N++
Sbjct: 444 VFKEMKKSGYVPERDTYVSLISSYSRC---GLFDQAMEIYKRMIE-AGIHPDISTYNAVL 499
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
AL GG +QAE +F + L+ + D S LH+Y + +++ L +
Sbjct: 500 SALAR--GG----RWEQAEKLFAEM--ENLDSRPDELSYSSLLHAYANAKKLDKMKSLSE 551
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
++ E ++ +++ V +K ++ D EK +L L + + Y K G
Sbjct: 552 DIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNG 611
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
K EI M+E + S Y+ ++ + + + E E+++ E + +P SY
Sbjct: 612 MVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYN 671
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEKCR---PNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
+ Y G FSE KC P+ Y I+++S E+A ++ +M
Sbjct: 672 TMIYAYGRKGQMKEASRLFSEM--KCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMV 729
Query: 499 SDQTIGVNTRSCNIILSAYLSSG 521
+ N R+ N IL Y S G
Sbjct: 730 T-HGCKPNERTYNTILQEYCSHG 751
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 144/329 (43%), Gaps = 18/329 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ G +P T+ LI +Y G D+A IY RMI+ G Y P S +N++
Sbjct: 452 VFKEMKKAGYIPERDTYVSLISSYSRC---GLFDQAMEIYKRMIEAGIY-PDISTYNAVL 507
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
AL GG +QAE +F ++ + + YS L LH+Y + +++ L +
Sbjct: 508 SALAR--GG----RWEQAEKLFAEMVDRDCKPDELSYSSL--LHAYANAKKLDKMKTLSE 559
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
++ E ++ +++ V K ++ + EK + L + + Y K
Sbjct: 560 DIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNK 619
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
K E+ M E + S Y+ ++ + + + E ES++ E +GM+P SY
Sbjct: 620 MVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYN 679
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEKC---RPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
+ Y G FSE KC +P+ Y I+++S E+A ++ ++
Sbjct: 680 TVIYAYGRKGQMKEASRLFSEM--KCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLV 737
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
+ Q N R+ N IL Y G V+A+
Sbjct: 738 T-QGCRPNERTFNSILQGYSRHGRMVEAK 765
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 152/367 (41%), Gaps = 20/367 (5%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ + D L D GK RK + + + N G PS +T++ LI AY+
Sbjct: 281 MKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVK--- 337
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL--VSKPGGLSKYYLQQAEFIFHNLLT 288
G L+EA + M + G +P + +L L V K + A + ++
Sbjct: 338 DGLLEEALELKQEM-EFRGMKPDVVTYTTLISGLDRVGK--------IDAALATYSEMVR 388
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
+G Y+ LI LH + E +++ +++ AG+ ++L V + G
Sbjct: 389 NGCSPNLCTYNALIKLHGVRGKF-TEMMAVFD-DLRSAGYVPDVVTWNTLLSVFGQNGLD 446
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
+ + + ++ +V + +Y++ G F +++EI++ M E + Y+ +
Sbjct: 447 SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAV 506
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR 468
+ L + E E L E V+ KP SY +L + Y N D++ SE + R
Sbjct: 507 LSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMK-TLSEDIYAER 565
Query: 469 PNRTIYGIYLESLKN--AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
R + + L N N+ + E+ F + + ++ N ++S Y + K
Sbjct: 566 IERHNWLVKTLVLVNNKVNNLPETEKAFQELRR-RRCSLDINVLNAMVSIYGKNKMVKKV 624
Query: 527 EKIYDLM 533
E++ LM
Sbjct: 625 EEVLSLM 631
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 138/348 (39%), Gaps = 25/348 (7%)
Query: 194 RKFAK--CRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
R FA+ C I+ P + L+ A+ A G +A +++ RM+ GG Q
Sbjct: 161 RVFARAGCLAEASAILEAAPAPDASAYTALVSAFSRA---GRFRDAVAVFQRMVD-GGVQ 216
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFI--FHNLLTSGLEIQKDIYSGLIWLHSYQD 309
P +N +F A SK + E + ++ G+E + Y+ LI +
Sbjct: 217 PALVTYNVVFHAY-------SKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISC-CRRR 268
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
+ +E + EM+ AGFE K S+L V K E+A R+ +N TP+
Sbjct: 269 GLHREAAQVFD-EMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRM---ENAGCTPS 324
Query: 370 FVYK---MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
V + AY K G ++LE+ +EM+ R V Y +I L + + + +
Sbjct: 325 VVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYS 384
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-PNRTIYGIYLESLKNAG 485
E V G P + +Y L ++ G + F + P+ + L G
Sbjct: 385 EMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNG 444
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ +F M I ++I S+Y G F +A +IY M
Sbjct: 445 LDSEVSGVFKEMKKAGYIPERDTYVSLI-SSYSRCGLFDQAMEIYKRM 491
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 134/298 (44%), Gaps = 15/298 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ G VP TF+ LI AY G D+A +IY RM+ G P S +N++
Sbjct: 488 VFKEMKRAGFVPERDTFNTLISAYSRC---GFFDQAMAIYRRMLD-AGVTPDLSTYNAVL 543
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
AL GGL +Q+E + + + + Y L LH+Y + + ER+S L +
Sbjct: 544 AALAR--GGL----WEQSEKVLAEMKDGRCKPNELTYCSL--LHAYANGKEVERMSALAE 595
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDV-EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
E+ +G E + VLL L + + D+ + E+ +L L E + Y +
Sbjct: 596 EIY-SGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRR 654
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
K+ EI +++ + S+ Y+ ++ + + E E +E +++E + GMKP + S+
Sbjct: 655 RMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISF 714
Query: 441 INLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ Y G F+E + P+ Y ++ S + +A ++ +M
Sbjct: 715 NTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYM 772
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 128/314 (40%), Gaps = 41/314 (13%)
Query: 150 LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQ 209
L C R E V+E M + + D L D GK R+ + ++ ++
Sbjct: 297 LISSCRRGSLYEEAAEVFEEM-KAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEAS 355
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG 269
G PS +T++ LI AY G LDEA + ++M++ G +P + +L +
Sbjct: 356 GFAPSIVTYNSLISAYAR---DGLLDEAMELKSQMVK-KGIKPDVFTYTTLLSGF--EKT 409
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
G Y ++ +F + +G + ++ LI +H + N EM + FE
Sbjct: 410 GKDDYAMK----VFEEMRVAGCQPNICTFNALIKMHGNRGNF---------VEMMKV-FE 455
Query: 330 EGK-----------EVLLSVLRVCAKEGDVEDAEKTWLR---LLESDNGIPTPAFVYKME 375
E K LL+V + +V K R + E D F +
Sbjct: 456 EIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERD------TFNTLIS 509
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
AY++ G F +++ I+R M + + + Y+ ++ L + E +E ++ E + KP
Sbjct: 510 AYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKP 569
Query: 436 LMPSYINLTNMYLN 449
+Y +L + Y N
Sbjct: 570 NELTYCSLLHAYAN 583
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 136/347 (39%), Gaps = 57/347 (16%)
Query: 158 RENETGFRVYEWMMQQHWYRFDFA------LATKLADYMGKERKFAKCRDIFDDIINQGR 211
++NE V+ ++ R DFA + + +GKE + + + D+ N G
Sbjct: 161 KKNELALCVFYFVRN----REDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGV 216
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL 271
+ LI AY S G EA ++ ++ + G RP+L + +++ G +
Sbjct: 217 HIDIYAYTSLITAYAS---NGRYREAVMVFKKLEEEGC---RPTLIT--YNVILNVYGKM 268
Query: 272 SKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEG 331
+ + A + ++ +SG + D+Y+ + S + E + + +EM+ AGF
Sbjct: 269 GMPWSKIAGLV-DSMKSSG--VAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPD 325
Query: 332 KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFR 391
K ++L V Y K +++E+ +
Sbjct: 326 KVTYNALLDV-----------------------------------YGKSRRPREAMEVLK 350
Query: 392 EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
EM+ + S+ Y+ +I + + L + V+ G+KP + +Y L + + G
Sbjct: 351 EMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTG 410
Query: 452 MHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
D F E + C+PN + ++ N GN + ++F +
Sbjct: 411 KDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEI 457
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 134/298 (44%), Gaps = 15/298 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ G VP TF+ LI AY G D+A +IY RM+ G P S +N++
Sbjct: 488 VFKEMKRAGFVPERDTFNTLISAYSRC---GFFDQAMAIYRRMLD-AGVTPDLSTYNAVL 543
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
AL GGL +Q+E + + + + Y L LH+Y + + ER+S L +
Sbjct: 544 AALAR--GGL----WEQSEKVLAEMKDGRCKPNELTYCSL--LHAYANGKEVERMSALAE 595
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDV-EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
E+ +G E + VLL L + + D+ + E+ +L L E + Y +
Sbjct: 596 EIY-SGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRR 654
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
K+ EI +++ + S+ Y+ ++ + + E E +E +++E + GMKP + S+
Sbjct: 655 RMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISF 714
Query: 441 INLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ Y G F+E + P+ Y ++ S + +A ++ +M
Sbjct: 715 NTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYM 772
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 128/314 (40%), Gaps = 41/314 (13%)
Query: 150 LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQ 209
L C R E V+E M + + D L D GK R+ + ++ ++
Sbjct: 297 LISSCRRGSLYEEAAEVFEEM-KAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEAS 355
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG 269
G PS +T++ LI AY G LDEA + ++M++ G +P + +L +
Sbjct: 356 GFAPSIVTYNSLISAYAR---DGLLDEAMELKSQMVK-KGIKPDVFTYTTLLSGF--EKT 409
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
G Y ++ +F + +G + ++ LI +H + N EM + FE
Sbjct: 410 GKDDYAMK----VFEEMRVAGCQPNICTFNALIKMHGNRGNF---------VEMMKV-FE 455
Query: 330 EGK-----------EVLLSVLRVCAKEGDVEDAEKTWLR---LLESDNGIPTPAFVYKME 375
E K LL+V + +V K R + E D F +
Sbjct: 456 EIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERD------TFNTLIS 509
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
AY++ G F +++ I+R M + + + Y+ ++ L + E +E ++ E + KP
Sbjct: 510 AYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKP 569
Query: 436 LMPSYINLTNMYLN 449
+Y +L + Y N
Sbjct: 570 NELTYCSLLHAYAN 583
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 136/347 (39%), Gaps = 57/347 (16%)
Query: 158 RENETGFRVYEWMMQQHWYRFDFA------LATKLADYMGKERKFAKCRDIFDDIINQGR 211
++NE V+ ++ R DFA + + +GKE + + + D+ N G
Sbjct: 161 KKNELALCVFYFVRN----REDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGV 216
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL 271
+ LI AY S G EA ++ ++ + G RP+L + +++ G +
Sbjct: 217 HIDIYAYTSLITAYAS---NGRYREAVMVFKKLEEEGC---RPTLIT--YNVILNVYGKM 268
Query: 272 SKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEG 331
+ + A + ++ +SG + D+Y+ + S + E + + +EM+ AGF
Sbjct: 269 GMPWSKIAGLV-DSMKSSG--VAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPD 325
Query: 332 KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFR 391
K ++L V Y K +++E+ +
Sbjct: 326 KVTYNALLDV-----------------------------------YGKSRRPREAMEVLK 350
Query: 392 EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
EM+ + S+ Y+ +I + + L + V+ G+KP + +Y L + + G
Sbjct: 351 EMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTG 410
Query: 452 MHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
D F E + C+PN + ++ N GN + ++F +
Sbjct: 411 KDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEI 457
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 148/314 (47%), Gaps = 15/314 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + +ER+ ++ ++ FD + ++ P + + L+ + A G + EA ++ M
Sbjct: 170 LISILCRERRASQAQEFFDSLKDKFE-PDVIVYTNLVRGWCRA---GNISEAERVFGEM- 224
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
++ G +P ++ + +L + G +++ A IF +L +G + Y+ L+ +H
Sbjct: 225 KVAGIKPNVYTYSIVIDSLC-RCGQITR-----AHDIFAEMLDAGCQPNSITYNSLMRIH 278
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
E++ + +M++ G E ++ K+ ++EDA K + +
Sbjct: 279 VKAGR--TEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAP 336
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
F AK+G+ + ++++M+E A+ Y+ ++++ ++ T++ L
Sbjct: 337 NASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLKLK 396
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKC-RPNRTIYGIYLESLKN 483
E E ++P + +Y L MY +G + + F E + EKC RP+ +Y + L+ L+
Sbjct: 397 TEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKCLRPSLPVYDMVLQQLRK 456
Query: 484 AGNIEKAEEIFNHM 497
AG ++K EE+ M
Sbjct: 457 AGQLKKHEELVEKM 470
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 144/338 (42%), Gaps = 26/338 (7%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
++FD++ + +P+ +T++ +I ++ G L+ S+ ++M+ G +P +N L
Sbjct: 217 EVFDEMTERAVLPNHITYNTMIDGHIKG---GDLEAGFSLRDQMV-CHGLKPNAITYNVL 272
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID-KERISLL 319
L + G + + E ++ G YS I N D K +SL
Sbjct: 273 LSGLC-RAGRMGETSALLDEMASQKMVPDGF-----TYS--ILFDGLSRNGDSKAMLSLF 324
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAY 377
K ++ G G +L K+G V AE+ L+ + G+ +Y + Y
Sbjct: 325 GKSLKN-GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA--GLVPTRVIYNTLINGY 381
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
+ GE + F +M+ R Y+ +I LCKAE + L+ E + G+ P +
Sbjct: 382 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 441
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
++ L + Y G ++ + SE E +PN YG + + G I +A I +
Sbjct: 442 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 501
Query: 497 M-HSDQTIGVNTRSCNIILSAYLSSGD----FVKAEKI 529
M H D + N + N I+ AY+ G F+ EK+
Sbjct: 502 MFHKD--VLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 537
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 148/356 (41%), Gaps = 20/356 (5%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + + K+ K + ++ ++N G VP+ + ++ LI Y G L+ A S + +M
Sbjct: 342 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT---GELEGAFSTFGQM- 397
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ +P +N+L L + A+ + + +G+ + ++ LI +
Sbjct: 398 KSRHIKPDHITYNALINGLCKAE------RITNAQDLLMEMQDNGVNPTVETFNTLIDAY 451
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
++K I L EMQ+ G + S++ K G + +A + D +
Sbjct: 452 GRTGQLEKCFIVL--SEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD--V 507
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
A VY ++AY + G ++ + +M+ S S+ Y+ +I+ LC + E
Sbjct: 508 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 567
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI--YGIYLESL 481
++ + P SY L + G D+ L + + K T+ Y + L
Sbjct: 568 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKA-LDLQQRMHKYGIKSTVRTYHQLISGL 626
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
AG + + E ++ M + + N NI++ AY G+ +KAE + M K+
Sbjct: 627 GGAGRLIEMEYLYQKMMQNNVVPSNAIH-NIMVEAYSKYGNEIKAEDLRKEMLQKR 681
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 129/297 (43%), Gaps = 13/297 (4%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ G VP T++ LI AY G D+A IY RM++ G P S +N++
Sbjct: 301 VFKEMKRAGFVPERDTYNTLISAYSRC---GSFDQAMDIYKRMLE-AGITPDLSTYNAVL 356
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
AL GGL +Q+E IF + + + Y L LH+Y + + R+ L +
Sbjct: 357 AALAR--GGL----WEQSEKIFAEMKDGRCKPNELTYCSL--LHAYANGKEIGRMLALAE 408
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
E+ E +L +++ V +K + +AE +L L + Y +
Sbjct: 409 EICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQ 468
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
F K+ EI M E + S+ Y+ ++ + ++E E +E ++KE + G+KP SY
Sbjct: 469 MFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYN 528
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ Y G FSE E P+ Y ++ S E A ++ +M
Sbjct: 529 TVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYM 585
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 124/301 (41%), Gaps = 13/301 (4%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
K + +F+ + N G +P E T++ LI + +EA +++ M +G + P +
Sbjct: 87 KIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLH---EEAAAVFKDMKSMG-FVPDKVTY 142
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
N+L G S+ + E + + +G Y+ LI ++ +D + KE +
Sbjct: 143 NALLDVY-----GKSRRTKEAME-VLREMEVNGCSPSIVTYNSLISAYA-RDGLLKEAME 195
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
L K +M + G ++L + G E A + + + + F ++ +
Sbjct: 196 L-KNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMH 254
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
G+F + +++F E++ + ++ ++ + + + KE G P
Sbjct: 255 GNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER 314
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+Y L + Y G D+ + LE P+ + Y L +L G E++E+IF
Sbjct: 315 DTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAE 374
Query: 497 M 497
M
Sbjct: 375 M 375
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 144/347 (41%), Gaps = 17/347 (4%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
+GKE K + + +D+ G + LI A +S G EA ++ +M + G
Sbjct: 8 LGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVS---NGRYREAVMVFKKMEEEG- 63
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
+P+L + +++ G + + + + +F + +G+ + Y+ LI +
Sbjct: 64 --CKPTLIT--YNVILNVYGKMGMPW-NKIKGLFEGMKNAGVLPDEYTYNTLITC-CRRG 117
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
++ +E ++ K +M+ GF K ++L V K ++A + LR +E NG
Sbjct: 118 SLHEEAAAVFK-DMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEV-LREMEV-NGCSPSI 174
Query: 370 FVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
Y + AYA+ G +++E+ +M E + V Y ++ +A + E + E
Sbjct: 175 VTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAE 234
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGN 486
G KP + ++ L M+ N G + F E C P+ + L G
Sbjct: 235 MRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGM 294
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ +F M + + N ++SAY G F +A IY M
Sbjct: 295 DSEVSGVFKEMKRAGFVP-ERDTYNTLISAYSRCGSFDQAMDIYKRM 340
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 8/265 (3%)
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
K+ ++AE + LL + +D Y+ LI + ++K + EM+ G
Sbjct: 175 KFLYKEAESTYLQLLEARCIPNEDTYALLIKAYCLSGLLEKAEAVFV--EMKNYGLPSSA 232
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
V S + K G+ AE+ +LR+ T + + Y K G+ +L++F E
Sbjct: 233 VVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNE 292
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
M ++ Y ++ + E E + ++ E G++P + SY L Y G
Sbjct: 293 MLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGF 352
Query: 453 HDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV--NTRS 509
FS C P+R Y I +++ AG + AE +F M + +G+ +S
Sbjct: 353 PYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDM---KRVGITPTMKS 409
Query: 510 CNIILSAYLSSGDFVKAEKIYDLMC 534
++LSA+ +G+ K E I + MC
Sbjct: 410 HMVLLSAFSKTGNVSKCEDILNQMC 434
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 157/382 (41%), Gaps = 59/382 (15%)
Query: 155 MRIREN-ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
+R+R+ ++ + W++ + ++ D L D G++ + + + ++ +P
Sbjct: 136 LRMRKQWDSIISICRWILLRSSFKQDVICYNLLIDAFGQKFLYKEAESTYLQLLEARCIP 195
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK 273
+E T+ +LI AY + G L++A +++ M G ++NS L+ K G +K
Sbjct: 196 NEDTYALLIKAYC---LSGLLEKAEAVFVEMKNYG-LPSSAVVYNSYINGLM-KGGNPNK 250
Query: 274 YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK--KEMQQAGFEEG 331
AE IF + G + + Y+ LI L+ D + LK EM +
Sbjct: 251 -----AEEIFLRMKRDGCKPSTETYTMLINLYGK----DGKSFMALKVFNEMLSHKCKPN 301
Query: 332 KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEI 389
+++ A+EG E AE+ + ++ E+ G+ + Y MEAY++ G + EI
Sbjct: 302 ICTYTALVNAFAREGLCEKAEEVFEQMQEA--GLEPDVYSYNALMEAYSRAGFPYGAAEI 359
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI-------- 441
F MQ +Y+ +++ +A E++ ++ G+ P M S++
Sbjct: 360 FSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSK 419
Query: 442 ---------------------------NLTNMYLNLGMHDRLHLAFSECLEK--CRPNRT 472
++ N+Y LG ++ + +E C + +
Sbjct: 420 TGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLT-VMENGSCEADIS 478
Query: 473 IYGIYLESLKNAGNIEKAEEIF 494
Y I + AG I+K E +F
Sbjct: 479 TYNILINRYGQAGFIDKMEGLF 500
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 162/386 (41%), Gaps = 28/386 (7%)
Query: 161 ETGFRVYEWM-MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFH 219
E +EW+ + Y + + + R+ + +++ +G P TF
Sbjct: 123 EKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFS 182
Query: 220 ILIVAYLSAPVQGCL--DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
LI + C +EA + RM + G P +NS+ + G + + +
Sbjct: 183 TLINC-----AKRCRQPEEALKWFERM-KSEGIVPDEVTYNSV----IDMYGRVGR--VN 230
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
+A ++ L + ++ Y + + Y D + I L +EM+ +G ++ +
Sbjct: 231 EAVELYEKLKSVNWKLDTVTYGAIA--NVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNT 288
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGI-PTPAFVYKM-EAYAKIGEFMKSLEIFREMQE 395
++ +K G V A+K + + S G+ PTP + + E Y ++G + ++ E++ ++
Sbjct: 289 LMGTLSKAGKVNQAKKVFNEMRTS--GVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKT 346
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
V Y+ +++ + E E ++KE G P +Y N Y GM D
Sbjct: 347 EGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDP 406
Query: 456 LHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
F + + +P+ ++ + + + K AG IE+A +IF+ M + R ++L
Sbjct: 407 ARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMESGCCSPDERVSGMLL 466
Query: 515 S--AYLSSGDFVKAEKIYDLMCLKKY 538
S A S D E++ L CL K+
Sbjct: 467 SCMAMAKSDD----ERLAILDCLDKF 488
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 156/360 (43%), Gaps = 21/360 (5%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
V EW++ + +R D L + GK+R+ K I+ ++ VP+E T+ +L+ AY
Sbjct: 304 VCEWILYRSSFRPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAY 363
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHN 285
+A G L A + + M + G P +++N+ L L ++A ++
Sbjct: 364 CNA---GSLHRAEGVISEMRE-HGIPPNATVYNAYLDGL------LKARCTEKAVEVYQR 413
Query: 286 LLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK--KEMQQAGFEEGKEVLLSVLRVCA 343
+ + ++ +I ++ K+ +S +K EM+ G + +++ A
Sbjct: 414 MKRERCRANTETFTLMINVYGKA----KQPMSSMKVFNEMKSIGCKPNICTYTALVNAFA 469
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP 403
+EG E AE+ + + ++ + A+ MEAY++ G + EIF MQ
Sbjct: 470 REGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRA 529
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC 463
+Y+ +++ +A E E++ +E + GM P M S++ L + G R ++
Sbjct: 530 SYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQ- 588
Query: 464 LEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
L K P+ L + AG ++ E + M V T N+ ++AY +G
Sbjct: 589 LHKSGLTPDTFALNAMLNAYARAGRLDDMERLLAAMERRGDADVGTY--NVAVNAYGRAG 646
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/451 (20%), Positives = 175/451 (38%), Gaps = 68/451 (15%)
Query: 147 GTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDI 206
G+++A ++ T + W +Q ++ D L + + E+ +++C I +++
Sbjct: 86 GSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEM 145
Query: 207 INQGRVPSEMTFHILIVAY-------------------------------LSAPVQGCLD 235
+ G P+ +F+ILI ++ + + +D
Sbjct: 146 LKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMD 205
Query: 236 E-ACSIYNRMIQLGGYQPRPSLHNSLFRALVS---------------KPG---------- 269
E A +++ M+ +G P +LH ++ R L+ K G
Sbjct: 206 EKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNT 265
Query: 270 ---GLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
GL+K + Q+A + N+L + Y I ++S ER L + M
Sbjct: 266 MIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG--ILVNSLCKAGTLERAEELFRVMAA 323
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMK 385
+GF + S++ AK G +++A + ++E+ ++ K G F +
Sbjct: 324 SGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQ 383
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+ + F EM +V Y II+ L K +MK + G P +YI L +
Sbjct: 384 AAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLD 443
Query: 446 MYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLESLKNAGNIEKA-EEIFNHMHSDQT 502
+ LG D E L+KC PN +Y + L + G++EK +++F +
Sbjct: 444 GFCKLGRLDEAAQLLDE-LDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAE 502
Query: 503 IGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
C+II+ +G +A +I+ M
Sbjct: 503 TLDPGLCCSIIV-GLCKTGRLDEACRIFQRM 532
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/384 (18%), Positives = 159/384 (41%), Gaps = 54/384 (14%)
Query: 160 NETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIF---------------- 203
+E F V+ MM + D AL T + + K ++ + R++F
Sbjct: 205 DEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYN 264
Query: 204 -------------------DDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM 244
D+++ + VP+E+T+ IL+ + A G L+ A ++ R+
Sbjct: 265 TMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKA---GTLERAEELF-RV 320
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
+ G++P ++ SL +K G +++A +F ++ +G + D+ + + +
Sbjct: 321 MAASGFRPNSVIYTSLIHGF-AKSG-----RMKEACSLFDEMVEAGY--RPDVITHTVMI 372
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
+ + E+ + +EM + G + ++++ +K G V +A + ++
Sbjct: 373 DGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCF 432
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
+ ++ ++ + K+G ++ ++ E+ + S ++ Y ++ LC E T
Sbjct: 433 PDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDD 492
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECL-EKCRPNRTIYGIYLES 480
+ E + + L P ++ + L RL A F + E C+P+ T Y I +
Sbjct: 493 LFEQSKAAAETLDPGLC--CSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIG 504
L + + E F +H + +G
Sbjct: 551 LCRSRE-NRVERAFALLHDLEKVG 573
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
KIGE +++++ E R +A V AY + LC + + SL +E V G P
Sbjct: 589 CKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDA 648
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+Y + N + + + F E + K +P Y +++L +AGN+++A F
Sbjct: 649 AAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFES 708
Query: 497 M 497
M
Sbjct: 709 M 709
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 161/372 (43%), Gaps = 20/372 (5%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + + K +F + I ++ ++G P+ + ++ LI Y G + A I + MI
Sbjct: 273 LINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRI---GNISTALQIRDDMI 329
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
G P NSL + G ++ AE + +LT G I + ++ +I
Sbjct: 330 S-NGISPNSVTCNSLIQ------GYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRL 382
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE---SD 362
+ D + ++ EM F+ +L ++ + G +A + W RLLE +
Sbjct: 383 CLKCRFDSALLFIM--EMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAA 440
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
N + + A ++ + + G ++ ++ +EM ER +Y+ +I CK + E
Sbjct: 441 NTVTSNALIHGL---CEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGF 497
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-PNRTIYGIYLESL 481
L +E V G++P M +Y L + N+G + + EC + P+ YGI ++
Sbjct: 498 KLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGY 557
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIE 541
A +E+ E++F M + I N ++ AY +G+ +A ++ D M +
Sbjct: 558 CKANRVEEGEKLFQEMVT-MKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQT 616
Query: 542 SAWMEKLDYVLS 553
SA L + LS
Sbjct: 617 SATYSSLIHGLS 628
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA----EETELTESLM 425
F + A+ G ++E+FR+M++ + +V Y+ II LCK E + E +
Sbjct: 200 FSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKME 259
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKNA 484
KE V KP + +Y L N + L D + E ++ PN +Y ++
Sbjct: 260 KERV----KPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRI 315
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
GNI A +I + M S+ I N+ +CN ++ Y S AE + + M
Sbjct: 316 GNISTALQIRDDMISNG-ISPNSVTCNSLIQGYCKSNQMEHAEHLLEEM 363
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 122/334 (36%), Gaps = 46/334 (13%)
Query: 236 EACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQK 295
EA ++ R+++ G+ N+L L SK ++A + +L GL +
Sbjct: 425 EAIELWYRLLE-KGFAANTVTSNALIHGLCEAG---SK---EEAAKLLKEMLERGLVLDS 477
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
Y+ LI + + E LK+EM + G + +L G +E+A W
Sbjct: 478 ISYNTLILACCKEGKV--EEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLW 535
Query: 356 LRLLESDN---------------------------------GIPTPAFVYK--MEAYAKI 380
++ N I A VY + AY +
Sbjct: 536 HECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCEN 595
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G ++ + +M+ R + Y +I L + L+ E + G+ P + Y
Sbjct: 596 GNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCY 655
Query: 441 INLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
L Y LG MH + + PN+ Y I + GN++ A ++ N M +
Sbjct: 656 TALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEM-A 714
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ I + + N + + + G +A K+ DLM
Sbjct: 715 QKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLM 748
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 121/316 (38%), Gaps = 48/316 (15%)
Query: 175 WYRF---DFALATKLADYM-------GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
WYR FA T ++ + G + + AK + +++ +G V ++++ LI+A
Sbjct: 430 WYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAK---LLKEMLERGLVLDSISYNTLILA 486
Query: 225 YLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL-----VSKPGGL-------- 271
+G ++E + M++ G QP +N L L + + GGL
Sbjct: 487 CCK---EGKVEEGFKLKEEMVRRG-IQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNG 542
Query: 272 ----------------SKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER 315
+++ E +F ++T +E +Y LI +Y +N +
Sbjct: 543 NFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLI--RAYCENGNMRE 600
Query: 316 ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME 375
L+ +M+ G + S++ + G V+ A + + + + +
Sbjct: 601 AFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIG 660
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
Y K+G+ K I +EM + Y +I CK + L+ E + G+ P
Sbjct: 661 GYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVP 720
Query: 436 LMPSYINLTNMYLNLG 451
+Y LTN + G
Sbjct: 721 DAVTYNALTNGFCKEG 736
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 182/423 (43%), Gaps = 44/423 (10%)
Query: 148 TYLAVHCMRIREN--ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDD 205
TY A+ I+E E R+ + M+ + + + + + K + AK +F++
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGL-KLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406
Query: 206 IINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV 265
++ G P T+++LI YL + +AC + M + P P ++ L L
Sbjct: 407 MLMAGLEPDTWTYNLLIDGYLKSHDMA---KACELLAEM-KARKLTPSPFTYSVLISGLC 462
Query: 266 S-------------------KP-----GGLSKYYLQQAEF-----IFHNLLTSGLEIQKD 296
KP G L K Y+Q++ + + ++ +G+
Sbjct: 463 HSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLF 522
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
Y+ LI +++ ++ L+ +M + G + + + + +K G+++ AE+ +
Sbjct: 523 CYNCLIIGLCRAKKVEEAKMLLV--DMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFK 580
Query: 357 RLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCK 414
+L S GI +Y ++ + +G +++L F+ M E+ + AY II L K
Sbjct: 581 DMLSS--GIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSK 638
Query: 415 AEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTI 473
+T+ + +F++TG+ P + Y +L + + G ++ + E L PN +
Sbjct: 639 NGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVV 698
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
Y + L G + KA E+F+ + + + + + I+ Y SG+ +A K++D M
Sbjct: 699 YNTLINGLCKLGEVTKARELFDEIEEKDLVP-DVVTYSTIIDGYCKSGNLTEAFKLFDEM 757
Query: 534 CLK 536
K
Sbjct: 758 ISK 760
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 158/387 (40%), Gaps = 51/387 (13%)
Query: 180 FALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACS 239
F T + Y+ +E ++ ++ +I G +P ++ LI+ A ++EA
Sbjct: 487 FMYGTLIKAYV-QESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKK---VEEAKM 542
Query: 240 IYNRMIQLGGYQPRPSLHN-SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
+ ++ +G +P+ H F L SK G +Q AE F ++L+SG+ IY
Sbjct: 543 L---LVDMGEKGIKPNAHTYGAFINLYSKSG-----EIQVAERYFKDMLSSGIVPNNVIY 594
Query: 299 SGLIWLHSYQDNI-----------------DKERISLLKKEMQQAG-FEEGKEVLLSVLR 340
+ LI H N D S + + + G +E V L L+
Sbjct: 595 TILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLK 654
Query: 341 VCA---------------KEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEF 383
KEGD+E A + + +L NGI VY + K+GE
Sbjct: 655 TGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH--NGINPNIVVYNTLINGLCKLGEV 712
Query: 384 MKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINL 443
K+ E+F E++E+ V Y II+ CK+ L E + G+ P Y L
Sbjct: 713 TKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCIL 772
Query: 444 TNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
+ G ++ F E +K + + + ++S G + +A E+F+ M D+ +
Sbjct: 773 IDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDM-VDKKL 831
Query: 504 GVNTRSCNIILSAYLSSGDFVKAEKIY 530
N + I++ AY + +AE+++
Sbjct: 832 TPNIVTYTILIDAYGKAEMMEEAEQLF 858
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 134/314 (42%), Gaps = 16/314 (5%)
Query: 224 AYLSAPVQ-GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
A++ Q G +DEA + M++ G P H + LV G + ++A+ I
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKG---LGPDGHT--YTLLVD--GFCKQKRSKEAKLI 333
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
F ++ +SGL + Y+ LI + NI E +K EM G + +++
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNI--EEALRIKDEMITRGLKLNVVTYNAMIGGI 391
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSA 400
AK G++ A + +L + G+ + Y + + Y K + K+ E+ EM+ R +
Sbjct: 392 AKAGEMAKAMSLFNEMLMA--GLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTP 449
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD-RLHLA 459
S Y +I LC + + + ++ + + G+KP + Y L Y+ ++ + L
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509
Query: 460 FSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
P+ Y + L A +E+A+ + M ++ I N + ++ Y
Sbjct: 510 KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM-GEKGIKPNAHTYGAFINLYSK 568
Query: 520 SGDFVKAEKIYDLM 533
SG+ AE+ + M
Sbjct: 569 SGEIQVAERYFKDM 582
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 16/260 (6%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
+ K K + +F + G VP ++ LI + +G +++A +Y+ M+ G
Sbjct: 636 LSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCK---EGDIEKASQLYDEMLH-NG 691
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
P ++N+L L K G ++K A +F + L YS +I +
Sbjct: 692 INPNIVVYNTLINGLC-KLGEVTK-----ARELFDEIEEKDLVPDVVTYSTIIDGYCKSG 745
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
N+ E L EM G + ++ C KEG++E A + + G A
Sbjct: 746 NL-TEAFKLFD-EMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSA 802
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
F ++++ K G+ +++ E+F +M ++ + ++ Y +I+ KAE E E L F+
Sbjct: 803 FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQL---FL 859
Query: 430 ETGMKPLMPSYINLTNMYLN 449
+ + ++P+ + T++ L+
Sbjct: 860 DMETRNIIPNTLTYTSLLLS 879
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 163/373 (43%), Gaps = 16/373 (4%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
+ +W++ + ++ D + + D G++ + + ++I +P+E T+ +L+ AY
Sbjct: 134 ICQWILYRSSFQSDVMIFNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDTYALLLKAY 193
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHN 285
++ G L++A +I+ M + G P ++N+ L+ K G Q+A IF
Sbjct: 194 CTS---GLLEKAEAIFAEMRKYG-LPPSAIVYNAYIDGLM-KAGNP-----QRAVEIFQR 243
Query: 286 LLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL-LKKEMQQAGFEEGKEVLLSVLRVCAK 344
+ + + Y+ LI LH + ++L L EM+ + +++ A+
Sbjct: 244 MKRDCCQPSTETYTLLINLHG---KASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAR 300
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
EG E AE+ + +L E + A+ MEAY++ G + EIF MQ +
Sbjct: 301 EGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRAS 360
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
Y+ +++ + E +++ +E G+ P M S++ L + Y G + +E
Sbjct: 361 YNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELH 420
Query: 465 EK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
E P+ + L G K EE+ M S + + NI+++ Y +G F
Sbjct: 421 ESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESG-PYATDISTYNILINIYGRAGFF 479
Query: 524 VKAEKIYDLMCLK 536
K E ++ + K
Sbjct: 480 EKMEGLFQSLAAK 492
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 139/327 (42%), Gaps = 31/327 (9%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + GK + +F+++ +Q P+ T+ L+ A+ +G ++A I+ +
Sbjct: 257 TLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAR---EGLCEKAEEIFEQ 313
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
+ Q G++P +N+L A S+ G + A IF + G E + Y+ I
Sbjct: 314 L-QEDGHEPDVYAYNALMEAY-SRAG-----FPYGAAEIFSLMQHMGCEPDRASYN--IM 364
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ +Y E + +EM++ G + + +L +K GDV E L ES
Sbjct: 365 VDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHES-- 422
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
G+ FV + Y ++G+F K E+ M+ + + Y+ +I + +A E
Sbjct: 423 GLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKM 482
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE--------KCRPNRTI 473
E L + +KP + ++ + LG + R L +++CLE C P+
Sbjct: 483 EGLFQSLAAKNLKPDVVTWTS------RLGAYSRKKL-YTKCLEIFEEMIDAGCHPDGRT 535
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSD 500
+ L S + IE+ + MH +
Sbjct: 536 AKVLLSSCSSEDQIEQVTTVIRTMHKN 562
>gi|115489794|ref|NP_001067384.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|77556813|gb|ABA99609.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649891|dbj|BAF30403.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|125580213|gb|EAZ21359.1| hypothetical protein OsJ_37016 [Oryza sativa Japonica Group]
Length = 859
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 7/233 (3%)
Query: 304 LHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+H+Y + N +E + + + EMQ+AG+E + +++ + AK G +E A + R+ E
Sbjct: 408 IHAYGRANYLREAVKVFE-EMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEV- 465
Query: 363 NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
G+ F Y + K G + ++F EM E + ++ Y+ +I L KA E
Sbjct: 466 -GLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYEN 524
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLES 480
L K+ G +P +Y + + + G D F E P+ +YG+ ++
Sbjct: 525 VVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDWAPDEPVYGLLVDL 584
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
AGN++KA ++ M D + N +CN +LSA+L F A + M
Sbjct: 585 WGKAGNVDKALGWYHAMLQD-GLQPNVPTCNSLLSAFLKINRFQDAYSVLQNM 636
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 130/314 (41%), Gaps = 38/314 (12%)
Query: 157 IRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEM 216
+ ++ ++W+ +Q ++ D T + +G+ R+F R + D++ + P+ +
Sbjct: 343 LHDHTIALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVV 402
Query: 217 TFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG------- 269
T++ +I AY A L EA ++ M Q GY+P + +L + +K G
Sbjct: 403 TYNRIIHAYGRA---NYLREAVKVFEEM-QKAGYEPDRVTYCTLID-IHAKGGYLEFAMD 457
Query: 270 --------GLSK---------------YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHS 306
GLS +L A +F ++ +G Y+ +I L +
Sbjct: 458 LYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQA 517
Query: 307 YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
N E + L K+MQ AGF K V+ V G +++AE ++ + D
Sbjct: 518 KARNY--ENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIE-MRHDWAPD 574
Query: 367 TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
P + ++ + K G K+L + M + +VP + ++ K + S+++
Sbjct: 575 EPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQ 634
Query: 427 EFVETGMKPLMPSY 440
+ G+ P + +Y
Sbjct: 635 NMLAQGLVPSLQTY 648
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 156/344 (45%), Gaps = 21/344 (6%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE----ACSIYNRMIQLGGYQPRPSL 256
D+FD+++ + R S + L+ APV + + A S++NRM + G + P +
Sbjct: 85 DLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKVAPDI 144
Query: 257 HNSLFRALVS---KPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
+ F L+S G L+ + + I +GL Q ++ L+ +
Sbjct: 145 --ATFGILISCCCDAGCLNLGFAALGQII-----KTGLRAQAVTFTPLLRTLCAEKRT-S 196
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLR-VCAKEGDVEDAEKTWLRLLESDNGIP-TPAFV 371
+ ++++ + M + G ++L+ +CA++ E AE + + DN P ++
Sbjct: 197 DAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYT 256
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
+ + K G+ K+ +F +M + +V + +I+ LCK + + E+++++ ++
Sbjct: 257 TVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDE 316
Query: 432 GMKPLMPSYINLTNMYLNLGM-HDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKA 490
+ P +Y +L + YL+ G + + + + RPN Y + ++ L +G +A
Sbjct: 317 HIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEA 376
Query: 491 EEIFNHM-HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
EIFN M S Q N + +L Y + G+ V + DLM
Sbjct: 377 REIFNSMIQSGQK--PNASTYGSLLHGYATEGNLVDMNNVKDLM 418
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 124/292 (42%), Gaps = 27/292 (9%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
I ++ G+ P+ +T+ +LI + + EA I+N MIQ G +P S + SL
Sbjct: 344 ILKEMSRDGQRPNVVTYSMLIDCLCKSGLHA---EAREIFNSMIQ-SGQKPNASTYGSLL 399
Query: 262 RALVSKPGGLSKYYLQQAEFIFHN-----LLTSGLEIQKDIYSGLIWLHSYQDNIDKERI 316
Y + + N ++ +G+ + +++ I+ + +D+
Sbjct: 400 HG-----------YATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEA-- 446
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--M 374
SL +MQQ GF +V+ K G ++DA + +++ D+G+ + +
Sbjct: 447 SLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMI--DDGLSPDIITFNTLI 504
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
+A G++ K+ E+F EM +R +V ++ +I+ L K + L G K
Sbjct: 505 HGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAK 564
Query: 435 PLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAG 485
P + SY + + Y G + + + L L +P + L+ + + G
Sbjct: 565 PNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMG 616
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 149/333 (44%), Gaps = 15/333 (4%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ +G VP T+ LI + QG +++A +++ M L G P ++N+L
Sbjct: 546 VFSELKEKGLVPDVFTYSSLISGFCK---QGEVEKAFELHDEMC-LKGIAPNIFIYNALV 601
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L K G + Q+A +F + GLE YS +I + +N+ E SL
Sbjct: 602 DGLC-KSGDI-----QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENV-AEAFSLFH- 653
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
EM G + V +++ C KEGD+E A + +L+ T +F ++ Y K
Sbjct: 654 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSC 712
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ ++ ++F+EM + Y +I+ CKA + E L KE E + +Y
Sbjct: 713 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 772
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
+L Y LG + F + + K +P+ YG+ + + N+ +A ++ + +
Sbjct: 773 SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 832
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ T +++++A D +A K+ D M
Sbjct: 833 GMLTKGTIH-DLLITALCKREDLTEASKLLDEM 864
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 140/355 (39%), Gaps = 24/355 (6%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
K K +I +I G P+ TF +LI Y G A + + M + P
Sbjct: 294 KMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMG---RALELLDEM-EKRNLVPSA 349
Query: 255 SLHNSLFRALV-SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
+ ++ L K L+ L++ F SGL+ +YS LI ++ + I++
Sbjct: 350 VSYGAMINGLCHCKDLSLANKLLEKMTF-------SGLKPNVVVYSTLIMGYASEGRIEE 402
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL----RLLESDNGIPTPA 369
R L M +G +++ +K G +E+A L R L+ D + A
Sbjct: 403 AR--RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD-AVTFGA 459
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
F+ Y+K G+ ++ + F EM + + P Y +I KA S+ +
Sbjct: 460 FIL---GYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLH 516
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIE 488
G+ P + + + L G FSE EK P+ Y + G +E
Sbjct: 517 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 576
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESA 543
KA E+ + M + I N N ++ SGD +A K++D M K E +S
Sbjct: 577 KAFELHDEM-CLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 630
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 129/336 (38%), Gaps = 26/336 (7%)
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIY---------------NRMIQLGGYQPRPSLHN 258
S + F ILI +Y G LDEA +++ N + +G L
Sbjct: 155 SPVVFDILIDSY---KRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMG----EKGLVP 207
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
+ + + G + +A+ F + +GL+ + S LI + +ID+ +
Sbjct: 208 NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE--VLR 265
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA 378
+K M G ++ K G +E A + ++ + F +E Y
Sbjct: 266 IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYC 325
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
+ ++LE+ EM++R S +Y +I LC ++ L L+++ +G+KP +
Sbjct: 326 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 385
Query: 439 SYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
Y L Y + G + + L P+ Y + L AG +E+A +
Sbjct: 386 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 445
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ + + + + Y +G +A K +D M
Sbjct: 446 QG-RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEM 480
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 140/345 (40%), Gaps = 24/345 (6%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
+ ++ + + F+++ G P LI ++ +G +DE I + M+ G
Sbjct: 221 RAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR---EGDIDEVLRIKDVMVSCG--- 274
Query: 252 PRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
++ + L+ GL K+ +++A I ++T G + + LI + + N
Sbjct: 275 --IPINLITYNVLIH---GLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHN 329
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
+ R L EM++ +++ D+ A K ++ S G+
Sbjct: 330 MG--RALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS--GLKPNVV 385
Query: 371 VYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
VY + YA G ++ + M + + Y+ II L KA + E + + E
Sbjct: 386 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 445
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNI 487
G+KP ++ Y G F E L+ PN +Y + + AGN+
Sbjct: 446 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 505
Query: 488 EKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIY 530
+A IF H+H+ +GV + ++C+ + L +G +A K++
Sbjct: 506 MEALSIFRHLHA---LGVLPDVQTCSAFIHGLLKNGRVQEALKVF 547
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 114/306 (37%), Gaps = 40/306 (13%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + K + R +FD + +G P +T+ +I Y + + EA S+++ M
Sbjct: 600 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSEN---VAEAFSLFHEMP 656
Query: 246 QLGGYQPRPSLHNSL----------------FRALVSK------------PGGLSKYYLQ 277
G QP ++N+L FR ++ K G +Q
Sbjct: 657 S-KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQ 715
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
+A +F ++ + Y+ +I H + E +LL KEMQ+ S
Sbjct: 716 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKM--EEANLLFKEMQERNLIVDTVTYTS 773
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
++ K G + + +++ G+ Y + YA E +E F+ E +
Sbjct: 774 LMYGYNKLGQSSEVFALFEKMVA--KGVKPDEVTYGLVIYAHCKE-DNLVEAFKLRDEVV 830
Query: 398 GSASVPA---YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
G + + +I LCK E+ L+ E E G+KP + + L + G D
Sbjct: 831 GKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMD 890
Query: 455 RLHLAF 460
F
Sbjct: 891 EATRVF 896
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 136/315 (43%), Gaps = 17/315 (5%)
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG 269
G PS + ++ +++A A L A ++ M+ G P +N L RAL +
Sbjct: 118 GYAPSVLAYNAVLLALSDAS----LPSARRFFDSMLS-DGVAPNVYTYNILVRALCGRG- 171
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
+ ++A + ++ +G + Y+ L+ +D R L M++ G +
Sbjct: 172 -----HRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVD--RAERLVDMMREGGLK 224
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEI 389
SV+ K G +EDA K + +++ ++ + Y K+G ++L +
Sbjct: 225 PNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSV 284
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
F EM + V + +I ++CKA E L++E E G++ ++ L + +
Sbjct: 285 FAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCK 344
Query: 450 LGMHDRLHLAFSECLEKCR--PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
G D LA E + +CR P+ Y + G +++A E+ M + + + +
Sbjct: 345 KGFLDDALLAVRE-MRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEA-KGVKPDV 402
Query: 508 RSCNIILSAYLSSGD 522
+ + ILSAY +GD
Sbjct: 403 VTYSTILSAYCKNGD 417
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/400 (18%), Positives = 168/400 (42%), Gaps = 33/400 (8%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
T +A C R E + R+ + MM++ + + + + + K + R +FD+++
Sbjct: 197 TLVAAFC-RAGEVDRAERLVD-MMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMV 254
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
+G P ++++ L+ Y GC EA S++ M + G P SL + K
Sbjct: 255 KEGLAPDGVSYNTLVGGYCKV---GCSHEALSVFAEMTR-KGIMPDVVTFTSLIHVM-CK 309
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
G L++A + + GL++ + ++ LI + +D +++ +EM+Q
Sbjct: 310 AGN-----LERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAV--REMRQCR 362
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMK 385
+ +++ G +++A + +R +E+ G+ Y + AY K G+
Sbjct: 363 IQPSVVCYNALINGYCMVGRMDEA-RELVREMEA-KGVKPDVVTYSTILSAYCKNGDTHS 420
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+ ++ ++M E Y +I +LC+ + L K + G++P +Y +L +
Sbjct: 421 AFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLID 480
Query: 446 MYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
+ G +R E ++ P+ Y + + L + ++A+ + ++ ++ +
Sbjct: 481 GHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVP 540
Query: 505 VNT------RSCN--------IILSAYLSSGDFVKAEKIY 530
N R C +L + G +A+K+Y
Sbjct: 541 ANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVY 580
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 149/333 (44%), Gaps = 15/333 (4%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ +G VP T+ LI + QG +++A +++ M L G P ++N+L
Sbjct: 635 VFSELKEKGLVPDVFTYSSLISGFCK---QGEVEKAFELHDEMC-LKGIAPNIFIYNALV 690
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L K G + Q+A +F + GLE YS +I + +N+ E SL
Sbjct: 691 DGLC-KSGDI-----QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENV-AEAFSLFH- 742
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
EM G + V +++ C KEGD+E A + +L+ T +F ++ Y K
Sbjct: 743 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSC 801
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ ++ ++F+EM + Y +I+ CKA + E L KE E + +Y
Sbjct: 802 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 861
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
+L Y LG + F + + K +P+ YG+ + + N+ +A ++ + +
Sbjct: 862 SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 921
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ T +++++A D +A K+ D M
Sbjct: 922 GMLTKGTIH-DLLITALCKREDLTEASKLLDEM 953
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 142/370 (38%), Gaps = 15/370 (4%)
Query: 165 RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
+VY M+ FD T L + K + + ++ +G P+E + ++I
Sbjct: 214 KVYNGMLDAKM-GFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEG 272
Query: 225 YLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
G +DEA + M + G L + + + G + +A+ F
Sbjct: 273 MCQV---GDIDEAVELKRSMGEKG-------LVPNTYTYTIITAGLCRAKRMNEAKLTFE 322
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
+ +GL+ + S LI + +ID+ + +K M G ++ K
Sbjct: 323 EMQKTGLKPDYNACSALIDGFMREGDIDE--VLRIKDVMVSCGIPINLITYNVLIHGLCK 380
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
G +E A + ++ + F +E Y + ++LE+ EM++R S +
Sbjct: 381 FGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 440
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSEC 463
Y +I LC ++ L L+++ +G+KP + Y L Y + G + + L
Sbjct: 441 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMS 500
Query: 464 LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
P+ Y + L AG +E+A + + + + + + Y +G
Sbjct: 501 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG-RGLKPDAVTFGAFILGYSKTGKM 559
Query: 524 VKAEKIYDLM 533
+A K +D M
Sbjct: 560 TEAAKYFDEM 569
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 140/355 (39%), Gaps = 24/355 (6%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
K K +I ++ G P+ TF +LI Y G A + + M + P
Sbjct: 383 KMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMG---RALELLDEM-EKRNLVPSA 438
Query: 255 SLHNSLFRALV-SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
+ ++ L K L+ L++ F SGL+ +YS LI ++ + I++
Sbjct: 439 VSYGAMINGLCHCKDLSLANKLLEKMTF-------SGLKPNVVVYSILIMAYASEGRIEE 491
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL----RLLESDNGIPTPA 369
R L M +G +++ +K G +E+A L R L+ D + A
Sbjct: 492 AR--RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD-AVTFGA 548
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
F+ Y+K G+ ++ + F EM + + P Y +I KA S+ +
Sbjct: 549 FIL---GYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLH 605
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIE 488
G+ P + + + L G FSE EK P+ Y + G +E
Sbjct: 606 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 665
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESA 543
KA E+ + M + I N N ++ SGD +A K++D M K E +S
Sbjct: 666 KAFELHDEM-CLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 719
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 140/345 (40%), Gaps = 24/345 (6%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
+ ++ + + F+++ G P LI ++ +G +DE I + M+ G
Sbjct: 310 RAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR---EGDIDEVLRIKDVMVSCG--- 363
Query: 252 PRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
++ + L+ GL K+ +++A I ++T G + + LI + + N
Sbjct: 364 --IPINLITYNVLIH---GLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHN 418
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
+ R L EM++ +++ D+ A K ++ S G+
Sbjct: 419 MG--RALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS--GLKPNVV 474
Query: 371 VYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
VY + AYA G ++ + M + + Y+ II L KA + E + + E
Sbjct: 475 VYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 534
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNI 487
G+KP ++ Y G F E L+ PN +Y + + AGN+
Sbjct: 535 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 594
Query: 488 EKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIY 530
+A IF +H+ +GV + ++C+ + L +G +A K++
Sbjct: 595 MEALSIFRRLHA---LGVLPDVQTCSAFIHGLLKNGRVQEALKVF 636
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 114/306 (37%), Gaps = 40/306 (13%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + K + R +FD + +G P +T+ +I Y + + EA S+++ M
Sbjct: 689 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSEN---VAEAFSLFHEMP 745
Query: 246 QLGGYQPRPSLHNSL----------------FRALVSK------------PGGLSKYYLQ 277
G QP ++N+L FR ++ K G +Q
Sbjct: 746 S-KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQ 804
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
+A +F ++ + Y+ +I H + E +LL KEMQ+ S
Sbjct: 805 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKM--EEANLLFKEMQERNLIVDTVTYTS 862
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
++ K G + + +++ G+ Y + YA E +E F+ E +
Sbjct: 863 LMYGYNKLGQSSEVFALFEKMVAK--GVKPDEVTYGLVIYAHCKE-DNLVEAFKLRDEVV 919
Query: 398 GSASVPA---YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
G + + +I LCK E+ L+ E E G+KP + + L + G D
Sbjct: 920 GKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMD 979
Query: 455 RLHLAF 460
F
Sbjct: 980 EATRVF 985
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 19/248 (7%)
Query: 299 SGLIWLHSYQDN--------IDK-ERISLLKKEMQQAGFEEGKEVLLSVLRVCA------ 343
S L W +Y + ID +R+ +L + + +L+S++R +
Sbjct: 145 SVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLL 204
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP 403
K G +E K + +L++ G + Y + A K G+ + + EM E+ + +
Sbjct: 205 KCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEF 264
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC 463
Y +IE +C+ + + L + E G+ P +Y +T + L F E
Sbjct: 265 IYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEE- 323
Query: 464 LEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
++K +P+ ++ G+I++ I + M S I +N + N+++ G
Sbjct: 324 MQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVS-CGIPINLITYNVLIHGLCKFG 382
Query: 522 DFVKAEKI 529
KA +I
Sbjct: 383 KMEKAAEI 390
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 150/337 (44%), Gaps = 14/337 (4%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
R++FD + +G P+E +F IL+ Y A G + + M +LG + P ++N+
Sbjct: 76 RELFDKMPEKGCEPNEYSFGILVRGYCRA---GFTSKGLELLGEMRRLG-FSPNKVVYNT 131
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI-WLHSYQDNIDKERISL 318
L + + AE + + GL ++ I L S ++ RI
Sbjct: 132 LISSFCKEG------KTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFR 185
Query: 319 LKKEMQQAGFEEGKEVLLSV-LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
+ + G + + ++ L KEG +E+A + ++ S+N + ++ +
Sbjct: 186 DMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGL 245
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
+IG+ +++ + +EM + +V +Y+ +++ LCK LM+ +G+ P
Sbjct: 246 VRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDT 305
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+Y L + Y + G + E + + C PN I L SL G I +AEE+
Sbjct: 306 VTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQK 365
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M+ + ++T +CNI++ ++G KA +I + M
Sbjct: 366 MNEKGYV-IDTVTCNIVIDGLCNNGKLDKAIEIVNGM 401
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 8/220 (3%)
Query: 316 ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME 375
+S L K+M +G ++ + G ++DA + + ++ E +F +
Sbjct: 40 VSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVR 99
Query: 376 AYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
Y + G K LE+ EM+ RLG S + Y+ +I CK +T+ E L+ E + G+
Sbjct: 100 GYCRAGFTSKGLELLGEMR-RLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLS 158
Query: 435 PLMPSYINLTNMYLNLGM---HDRL--HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEK 489
P + ++ + + G R+ + E L +PN Y + L G +E+
Sbjct: 159 PDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEE 218
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
A +F M + + +N S NI L + G ++A+ +
Sbjct: 219 ARALFEKMKVSENL-MNRESYNIWLLGLVRIGKLLEAQLV 257
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 46/106 (43%)
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+ EM+ER S V Y+ ++ LC+ + S++ E ++ G+ P + S+ L +
Sbjct: 525 LIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFC 584
Query: 449 NLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ F L C +Y + L G + KA+E+F
Sbjct: 585 KACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKELF 630
>gi|414869157|tpg|DAA47714.1| TPA: hypothetical protein ZEAMMB73_516901 [Zea mays]
Length = 853
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 7/226 (3%)
Query: 304 LHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+H+Y + N KE + + + EMQ+AG+E + +++ + AK G ++ A + R+ E
Sbjct: 402 IHAYGRANYLKEAVKVFE-EMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEV- 459
Query: 363 NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
G+ F Y + K G+ + ++F EM E + ++ Y+ +I L KA E
Sbjct: 460 -GLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYEN 518
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLES 480
L K+ G +P +Y + + + G D F E P+ +YG+ ++
Sbjct: 519 VVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGLLVDL 578
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
AGN++KA + M D + N +CN +LSA+L F A
Sbjct: 579 WGKAGNVDKALGWYQAMLQD-GLQPNVPTCNSLLSAFLKMNRFQDA 623
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/316 (19%), Positives = 127/316 (40%), Gaps = 42/316 (13%)
Query: 157 IRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEM 216
+ ++ ++W+ +Q ++ D T + +G+ R+F +++ D++ P+ +
Sbjct: 337 LHDHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVV 396
Query: 217 TFHILIVAYLSA--------------------------------PVQGCLDEACSIYNRM 244
T++ +I AY A G LD A +Y RM
Sbjct: 397 TYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRM 456
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
++ G P ++ + L K G L+ Y +F ++ +G Y+ +I L
Sbjct: 457 QEV-GLSPDTFTYSVMVNCL-GKGGQLAAAYK-----LFCEMIENGCTPNLVTYNIMIAL 509
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
+ N E + L K+MQ AGF K V+ V G +++AE ++ + D
Sbjct: 510 QAKARNY--ENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIE-MRRDWA 566
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
P + ++ + K G K+L ++ M + +VP + ++ K + +
Sbjct: 567 PDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIV 626
Query: 425 MKEFVETGMKPLMPSY 440
++ + G+ P + +Y
Sbjct: 627 LQNMLARGLVPSVQTY 642
>gi|449475395|ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 511
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 147/369 (39%), Gaps = 46/369 (12%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E+ +V+E + +Q WYR + KL +GK ++ K ++F ++I +G S ++
Sbjct: 136 ESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTA 195
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ AY + G LDEA SI N M QP ++ L ++ L + +A+
Sbjct: 196 LLSAYSRS---GLLDEAFSILNEMKNSPDCQPDVHTYSILIKSC------LQVFAFNKAQ 246
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ +++T G++ Y+ I + + + E S+L + G + + S LR
Sbjct: 247 TLLSDMVTRGIKPNTITYNTFIDAYG-KAKMFAEMESILVDMLNDDGCKPDVWTMNSTLR 305
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
+ G +E EK + + E+ F +++Y K + K + MQ+ S
Sbjct: 306 AFGRSGQLETMEKCYEKFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSW 365
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR----- 455
++ Y+ +I+ +A + E L + +KP + +L Y G ++
Sbjct: 366 TIVTYNIVIDAFGRAGNLKQMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVL 425
Query: 456 ---------LHLAFSECL----------------------EKCRPNRTIYGIYLESLKNA 484
L F CL C+P++T Y + +
Sbjct: 426 NLVENSDIMLDTVFYNCLVDAYGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSDG 485
Query: 485 GNIEKAEEI 493
G A+EI
Sbjct: 486 GMANHAKEI 494
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 114/262 (43%), Gaps = 10/262 (3%)
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
++A +F ++ G E+ + Y+ L+ +S +D E S+L + +
Sbjct: 172 EKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLLD-EAFSILNEMKNSPDCQPDVHTYS 230
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQ 394
+++ C + A+ ++ GI Y ++AY K F + I +M
Sbjct: 231 ILIKSCLQVFAFNKAQTLLSDMV--TRGIKPNTITYNTFIDAYGKAKMFAEMESILVDML 288
Query: 395 ERLG-SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
G V + + ++ + E E ++F E G++P + ++ L + Y +
Sbjct: 289 NDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFNILLDSYGKAESY 348
Query: 454 DRLHLAFSECLEKCRPNRTI--YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
+++ A E ++K + TI Y I +++ AGN+++ E +F M S++ C+
Sbjct: 349 EKMS-AVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRSERIKPSCVTLCS 407
Query: 512 IILSAYLSSGDFVKAEKIYDLM 533
++ AY +G K + + +L+
Sbjct: 408 LV-RAYGQAGKREKIDSVLNLV 428
>gi|242086476|ref|XP_002443663.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
gi|241944356|gb|EES17501.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
Length = 853
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 7/226 (3%)
Query: 304 LHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+H+Y + N KE + + + EMQ+AG+E + +++ + AK G ++ A + R+ E
Sbjct: 402 IHAYGRANYLKEAVKVFE-EMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEV- 459
Query: 363 NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
G+ F Y + K G+ + ++F EM E + ++ Y+ +I L KA E
Sbjct: 460 -GLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYEN 518
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLES 480
L K+ G +P +Y + + + G D F E P+ +YG+ ++
Sbjct: 519 VVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGLLVDL 578
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
AGN++KA + M D + N +CN +LSA+L F A
Sbjct: 579 WGKAGNVDKALGWYQAMLQD-GLQPNVPTCNSLLSAFLKMNRFQDA 623
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/316 (19%), Positives = 127/316 (40%), Gaps = 42/316 (13%)
Query: 157 IRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEM 216
+ ++ ++W+ +Q ++ D T + +G+ R+F + + D++ P+ +
Sbjct: 337 LHDHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVV 396
Query: 217 TFHILIVAYLSA--------------------------------PVQGCLDEACSIYNRM 244
T++ +I AY A G LD A +Y RM
Sbjct: 397 TYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRM 456
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
++ G P ++++ L K G L+ Y +F ++ +G Y+ +I L
Sbjct: 457 QEV-GLSPDTFTYSAMVNCL-GKGGQLAAAYK-----LFCEMIENGCTPNLVTYNIMIAL 509
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
+ N E + L K+MQ AGF K V+ V G +++AE ++ + D
Sbjct: 510 QAKARNY--ENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIE-MRRDWA 566
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
P + ++ + K G K+L ++ M + +VP + ++ K + +
Sbjct: 567 PDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIV 626
Query: 425 MKEFVETGMKPLMPSY 440
++ + G+ P + +Y
Sbjct: 627 LQNMLAQGLVPSVQTY 642
>gi|225446761|ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040
[Vitis vinifera]
gi|302143502|emb|CBI22063.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 130/321 (40%), Gaps = 55/321 (17%)
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK 273
SEM F +L+ AY QG ++A ++ M + GY P H +L A G K
Sbjct: 139 SEMDFLMLVTAYGK---QGDFNKAERVFGDMHK-KGYSPSVISHTALMEAY-----GKGK 189
Query: 274 YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKE 333
Y +AE +F +L+SG E Y
Sbjct: 190 QY-NKAESVFRRMLSSGPEPSALTYQ---------------------------------- 214
Query: 334 VLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKSLEIF 390
+L++ + ++AE+T+ LL+ + P F + Y K G + K+ +IF
Sbjct: 215 ---LILKIFVEGNKFKEAEETFETLLDDEKSPLKPDQKMFHMMIYMYRKAGNYEKARKIF 271
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
M+ER S Y+ ++ +E T M+ G++P + SY L N Y
Sbjct: 272 GLMRERGVPQSTVTYNSLMSFETNYKEVSKTYDQMQR---AGLRPDVVSYALLINAYGKA 328
Query: 451 GMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
+ F E L+ RP Y I L++ +G +++A +F M D+ + S
Sbjct: 329 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKSMRRDRCTP-DICS 387
Query: 510 CNIILSAYLSSGDFVKAEKIY 530
+LSAY+++ D AEK +
Sbjct: 388 YTTMLSAYVNASDMEGAEKFF 408
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 177/424 (41%), Gaps = 33/424 (7%)
Query: 110 QWRRAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEW 169
+WRR + KE+ + G+ V +L+ + + L ++ V ++++ + EW
Sbjct: 77 KWRR-----MMKEI--EEVGSAVSVLSTKNQALPRDLVLGTLVRFKQLKKWSLVSEILEW 129
Query: 170 MMQQHWYRF---DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYL 226
+ Q W+ F DF + L GK+ F K +F D+ +G PS ++ L+ AY
Sbjct: 130 LQTQPWWDFSEMDFLM---LVTAYGKQGDFNKAERVFGDMHKKGYSPSVISHTALMEAYG 186
Query: 227 SAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNL 286
++A S++ RM+ G P PS +L L+ K + ++AE F L
Sbjct: 187 KGK---QYNKAESVFRRMLSSG---PEPS---ALTYQLILKI-FVEGNKFKEAEETFETL 236
Query: 287 L---TSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCA 343
L S L+ + ++ +I+++ N +K R + M++ G + S++
Sbjct: 237 LDDEKSPLKPDQKMFHMMIYMYRKAGNYEKAR--KIFGLMRERGVPQSTVTYNSLMSF-- 292
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP 403
E + ++ KT+ ++ + ++ + AY K ++L +F EM + +
Sbjct: 293 -ETNYKEVSKTYDQMQRAGLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 351
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC 463
AY+ +++ + + ++ K P + SY + + Y+N + F
Sbjct: 352 AYNILLDAFAISGMVDQARTVFKSMRRDRCTPDICSYTTMLSAYVNASDMEGAEKFFRRL 411
Query: 464 LEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
+ PN YG ++ N+EK E + M I N ++ AY + D
Sbjct: 412 KQDGFEPNVVTYGTLIKGYAKISNLEKMMEKYEEMQV-HGIKANQAIYTAMMDAYGKNKD 470
Query: 523 FVKA 526
F A
Sbjct: 471 FGSA 474
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 82/168 (48%), Gaps = 8/168 (4%)
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
F+ + AY K G+F K+ +F +M ++ S SV ++ ++E K ++ ES+ + +
Sbjct: 143 FLMLVTAYGKQGDFNKAERVFGDMHKKGYSPSVISHTALMEAYGKGKQYNKAESVFRRML 202
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK----CRPNRTIYGIYLESLKNAG 485
+G +P +Y + +++ F L+ +P++ ++ + + + AG
Sbjct: 203 SSGPEPSALTYQLILKIFVEGNKFKEAEETFETLLDDEKSPLKPDQKMFHMMIYMYRKAG 262
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
N EKA +IF M ++ + +T + N ++S ++ + K YD M
Sbjct: 263 NYEKARKIFGLMR-ERGVPQSTVTYNSLMSF---ETNYKEVSKTYDQM 306
>gi|449443726|ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 456
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 147/369 (39%), Gaps = 46/369 (12%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E+ +V+E + +Q WYR + KL +GK ++ K ++F ++I +G S ++
Sbjct: 81 ESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTA 140
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ AY + G LDEA SI N M QP ++ L ++ L + +A+
Sbjct: 141 LLSAYSRS---GLLDEAFSILNEMKNSPDCQPDVHTYSILIKSC------LQVFAFNKAQ 191
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ +++T G++ Y+ I + + + E S+L + G + + S LR
Sbjct: 192 TLLSDMVTRGIKPNTITYNTFIDAYG-KAKMFAEMESILVDMLNDDGCKPDVWTMNSTLR 250
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
+ G +E EK + + E+ F +++Y K + K + MQ+ S
Sbjct: 251 AFGRSGQLETMEKCYEKFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSW 310
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR----- 455
++ Y+ +I+ +A + E L + +KP + +L Y G ++
Sbjct: 311 TIVTYNIVIDAFGRAGNLKQMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVL 370
Query: 456 ---------LHLAFSECL----------------------EKCRPNRTIYGIYLESLKNA 484
L F CL C+P++T Y + +
Sbjct: 371 NLVENSDIMLDTVFYNCLVDAYGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSDG 430
Query: 485 GNIEKAEEI 493
G A+EI
Sbjct: 431 GMANHAKEI 439
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 114/262 (43%), Gaps = 10/262 (3%)
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
++A +F ++ G E+ + Y+ L+ +S +D E S+L + +
Sbjct: 117 EKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLLD-EAFSILNEMKNSPDCQPDVHTYS 175
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQ 394
+++ C + A+ ++ GI Y ++AY K F + I +M
Sbjct: 176 ILIKSCLQVFAFNKAQTLLSDMV--TRGIKPNTITYNTFIDAYGKAKMFAEMESILVDML 233
Query: 395 ERLG-SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
G V + + ++ + E E ++F E G++P + ++ L + Y +
Sbjct: 234 NDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFNILLDSYGKAESY 293
Query: 454 DRLHLAFSECLEKCRPNRTI--YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
+++ A E ++K + TI Y I +++ AGN+++ E +F M S++ C+
Sbjct: 294 EKMS-AVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRSERIKPSCVTLCS 352
Query: 512 IILSAYLSSGDFVKAEKIYDLM 533
++ AY +G K + + +L+
Sbjct: 353 LV-RAYGQAGKREKIDSVLNLV 373
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 142/329 (43%), Gaps = 18/329 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ G +P T+ LI +Y G D+A IY RMI+ G Y P S +N++
Sbjct: 453 VFKEMKKAGYIPERDTYVSLISSYSRC---GLFDQAMEIYKRMIEAGIY-PDISTYNAVL 508
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
AL GG QAE +F + + + YS L LH+Y + +++ L +
Sbjct: 509 SALAR--GG----RWVQAEKLFAEMEDRDCKPDELSYSSL--LHAYANAKKLDKMKALSE 560
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
++ E ++ +++ V K + + EK + L + + Y K
Sbjct: 561 DIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNK 620
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
K E+ M+E + S Y+ ++ + + + E E+++ E +GM+P SY
Sbjct: 621 MVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYN 680
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEKC---RPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
+ Y G FSE KC +P+ Y I+++S E+A ++ ++
Sbjct: 681 TVIYAYGRKGQMKEASRLFSEM--KCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLV 738
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
+ Q N R+ N IL Y G V+A+
Sbjct: 739 A-QGCKPNERTYNSILEGYCRHGRMVEAK 766
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/367 (19%), Positives = 149/367 (40%), Gaps = 20/367 (5%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ + D L D GK R+ + + + N G PS +T++ LI AY+
Sbjct: 282 MKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVK--- 338
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL--VSKPGGLSKYYLQQAEFIFHNLLT 288
G L+EA + M + G +P + +L L + K + A + ++
Sbjct: 339 DGLLEEALELKQEM-EFRGMKPDVVTYTTLISGLDRIGK--------IDAALATYSEMVR 389
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
+G Y+ LI +H + + I +++ AG+ ++L V + G
Sbjct: 390 NGCSPNLCTYNALIKMHGVRGKFTEMMIVF--DDLRSAGYVPDVVTWNTLLAVFGQNGLD 447
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
+ + + ++ +V + +Y++ G F +++EI++ M E + Y+ +
Sbjct: 448 SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAV 507
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL--EK 466
+ L + E L E + KP SY +L + Y N D++ A SE + ++
Sbjct: 508 LSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMK-ALSEDIYAQR 566
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
P+ + + ++ + E+ F + + ++ N ++S Y + K
Sbjct: 567 IEPHNWLVKTLVLVNNKVNSLSETEKAFQELRR-RRCSLDINVLNAMVSIYGKNKMVKKV 625
Query: 527 EKIYDLM 533
E++ LM
Sbjct: 626 EEVLTLM 632
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 136/343 (39%), Gaps = 55/343 (16%)
Query: 232 GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL--VSKPGGLSKYYLQQAEFIFHNLLTS 289
G +A +++ RM+ GG QP +N + +S P ++ + ++
Sbjct: 199 GRFRDAVAVFRRMVD-GGVQPALVTYNVVLHVYSKMSVP-------WKEVVVLVDSMKED 250
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
G+E+ + Y+ LI + + +E + EM+ AGFE K S+L V K E
Sbjct: 251 GIELDRYTYNTLISC-CRRRGLYREAAQMFD-EMKAAGFEPDKVTFNSLLDVYGKARRHE 308
Query: 350 DAEKTWLRLLESDNGIPTPAFVYK---MEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
+A ++ +N TP+ V + AY K G ++LE+ +EM+ R V Y
Sbjct: 309 EAIGVLKKM---ENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYT 365
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC--- 463
+I L + + + + E V G P + +Y L M+ G + + F +
Sbjct: 366 TLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSA 425
Query: 464 -------------------------------LEKCR--PNRTIYGIYLESLKNAGNIEKA 490
++K P R Y + S G ++A
Sbjct: 426 GYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQA 485
Query: 491 EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
EI+ M + I + + N +LSA G +V+AEK++ M
Sbjct: 486 MEIYKRM-IEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEM 527
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 169/382 (44%), Gaps = 24/382 (6%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R R+ + +YEW++Q ++ D L D G+ +++ + + F + +P+E
Sbjct: 77 RQRKWRSAIVIYEWILQGSMFKPDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTE 136
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+F++L+ AY G L+ A + + M + P +N+ L +K G
Sbjct: 137 TSFNVLMAAYSRG---GQLERAERVLHEMKE-SNCSPGLVTYNTYLEVL-NKSGS----- 186
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
Q AE +F + G+ + ++ +I + Y + L + M++A
Sbjct: 187 WQLAEDVFREMQNRGVPPAVNTFTLMI--NIYGKAHHSAKAEHLFQSMRKALCPPSLFTY 244
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM 393
+++ A+EG+ AE+ + L+S +P + Y +EAY++ G + E+F M
Sbjct: 245 TALINAHAREGNCVRAEEIFAE-LQSVGFVPD-IYTYNALLEAYSRGGHPAGAKEVFETM 302
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
E A +Y+ +I+ +A +++ + G KP M S+I L + ++ G
Sbjct: 303 LEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAG-- 360
Query: 454 DRLHLA--FSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
R+ A F LE P+ ++ L + N+G ++K E ++ M + +
Sbjct: 361 -RVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGS-VCKPDIIT 418
Query: 510 CNIILSAYLSSGDFVKAEKIYD 531
N +++ Y G +AE+I++
Sbjct: 419 LNTLINVYAQGGYIERAEEIFN 440
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 8/188 (4%)
Query: 350 DAEKTWLRLLESDNGIPT-PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
+AE T+ L++ +PT +F M AY++ G+ ++ + EM+E S + Y+
Sbjct: 119 EAENTF-HLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTY 177
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL-HLAFSECLEKC 467
+E+L K+ +L E + +E G+ P + ++ + N+Y + HL S C
Sbjct: 178 LEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALC 237
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVK 525
P+ Y + + GN +AEEIF + Q++G + + N +L AY G
Sbjct: 238 PPSLFTYTALINAHAREGNCVRAEEIFAEL---QSVGFVPDIYTYNALLEAYSRGGHPAG 294
Query: 526 AEKIYDLM 533
A+++++ M
Sbjct: 295 AKEVFETM 302
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 7/217 (3%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA 378
L K+ Q E VL++ ++ G +E AE+ + ES+ + +E
Sbjct: 126 LMKKFQCLPTETSFNVLMAAY---SRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLN 182
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
K G + + ++FREMQ R +V + +I + KA + E L + + P +
Sbjct: 183 KSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLF 242
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+Y L N + G R F+E L+ P+ Y LE+ G+ A+E+F
Sbjct: 243 TYTALINAHAREGNCVRAEEIFAE-LQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFET 301
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M + + + S NI++ A+ +G A+ IYD M
Sbjct: 302 ML-EAGVKADHVSYNILIDAFGRAGLISDAQAIYDSM 337
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 125/316 (39%), Gaps = 21/316 (6%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T + + GK AK +F + PS T+ LI A+ +G A I+
Sbjct: 210 TLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAR---EGNCVRAEEIFAE 266
Query: 244 MIQLGGYQPRPSLHNSLFRALV--SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
+ Q G+ P +N+L A P G A+ +F +L +G++ Y+ L
Sbjct: 267 L-QSVGFVPDIYTYNALLEAYSRGGHPAG--------AKEVFETMLEAGVKADHVSYNIL 317
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
I I + + M++ GF+ + + +L K G V DAE ++R LES
Sbjct: 318 IDAFGRAGLISDAQA--IYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAEN-FVRRLES 374
Query: 362 DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
G+ F++ + AY G K ++ MQ + + + +I + + E
Sbjct: 375 -MGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIE 433
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYL 478
E + G P + S+ +L Y ++ + + + L C P+R + L
Sbjct: 434 RAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAGCIPDRATAKVLL 493
Query: 479 ESLKNAGNIEKAEEIF 494
S + +++ ++
Sbjct: 494 SSCRGPEQVKEVTDMI 509
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 161/373 (43%), Gaps = 53/373 (14%)
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYL-SAPVQGCLDEACSIYNRMIQLGGYQPRP 254
+K +++ + G P+ +T++ L+ +Y VQ LD + R G P
Sbjct: 215 MSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRR-----GCAPND 269
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
+N L L SK G +QA+ + +L +GL++ Y+ LI+ + + + E
Sbjct: 270 VTYNVLINGL-SKKG-----EFEQAKGLIGEMLKTGLKVSAYTYNPLIYGY-FNKGMLAE 322
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYK 373
+SL ++EM G S + K G + DA + +L ++N +P ++
Sbjct: 323 ALSL-QEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDML-ANNLLPDVVSYNTL 380
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ Y ++G MK+ +F E++ ++ Y+ +++ LC+ E E+ + L E + G+
Sbjct: 381 IYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGI 440
Query: 434 KPLMPSYINLTNMYLNLG------------MHDRLHL--------------------AFS 461
P + +Y L N +G +H+ L L AFS
Sbjct: 441 APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFS 500
Query: 462 ---ECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
E L K P+ IY + ++ L GN+E+A E+ M SD I +II A+
Sbjct: 501 LQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSII-HAH 559
Query: 518 LSSGDFVKAEKIY 530
L +G K +I+
Sbjct: 560 LENGRLRKGREIF 572
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 113/547 (20%), Positives = 224/547 (40%), Gaps = 55/547 (10%)
Query: 131 LVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFR--------VYEWMMQQHWYRFDFAL 182
VR+L++ + R +A+ R E++ GFR + E + Q + R + +
Sbjct: 84 FVRVLSSFRTSPR------MALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWV 137
Query: 183 ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYN 242
++ + A I D +I G V SE++ IL + + +++ S+++
Sbjct: 138 MERVIN--------ANMHRIVDVLIG-GCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFD 188
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
+MI+ P N + R L K + +A ++ + G++ Y+ L
Sbjct: 189 KMIK-SRLSPDVKNCNRILRILRDKD------LMSKAVEVYRTMGEFGIKPTIVTYNTL- 240
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
L SY ++ L EMQ+ G ++ +K+G+ E A+ +L++
Sbjct: 241 -LDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKT- 298
Query: 363 NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
G+ A+ Y + Y G ++L + EM + S +V Y+ I LCK
Sbjct: 299 -GLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSD 357
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLE 479
+ + + + P + SY L Y LG + L F E P Y L+
Sbjct: 358 AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLD 417
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
L G +E A+++ M ++ I + + I+++ G A++ +D M + E
Sbjct: 418 GLCRQGELEVAQQLKVEM-INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLE 476
Query: 540 IES-AWMEKLDYVLSLNRKEVKKPVSLN---LSSEQRENLI--GLLLGGLCIESDEKRKR 593
++S A+ ++ V L + + SL L+ +LI +++ GLC + +
Sbjct: 477 LDSYAYATRI--VGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEAS 534
Query: 594 HMIRFQFNENSRMHSVLRRYLYDQYHEWLHPSFKF--WPKGRLVIPKLIHRWLTPRALAY 651
+++ ++ V+ Y+ Y +H + KGR + +++ + LTP + Y
Sbjct: 535 ELLQKMVSD-----GVIPDYV--TYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTY 587
Query: 652 WFMYGGH 658
+ GH
Sbjct: 588 TVLIHGH 594
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 8/237 (3%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
L A+ F +L GLE+ D Y+ + D R L++EM GF +
Sbjct: 460 LSMAQEFFDEMLHEGLEL--DSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIY 517
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT-PAFVYKMEAYAKIGEFMKSLEIFREMQ 394
V+ K G++E+A + L+ + SD IP + + A+ + G K EIF EM
Sbjct: 518 NVVVDGLCKLGNLEEASE-LLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEML 576
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
+ + SV Y +I E E E G+ P + +Y +L N + D
Sbjct: 577 SKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMD 636
Query: 455 RLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC 510
+ + F+E +EK PN+ Y I + N GN ++A ++ M GV SC
Sbjct: 637 QAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDR---GVQPDSC 690
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 101/266 (37%), Gaps = 12/266 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + ++ + + + ++IN+G P +T+ IL+ G L A ++ M+
Sbjct: 415 LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCK---MGSLSMAQEFFDEML 471
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
G + + L K G S+ + Q E + L I + GL L
Sbjct: 472 HEGLELDSYAYATRIVGEL--KLGDTSRAFSLQEEMLAKGF-PPDLIIYNVVVDGLCKLG 528
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+ E S L ++M G S++ + G + + + +L
Sbjct: 529 NL------EEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTP 582
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
+ + +A G ++ F EMQE+ +V Y+ +I LCK + +
Sbjct: 583 SVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFF 642
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLG 451
E VE G+ P SY L N N+G
Sbjct: 643 AEMVEKGIFPNKYSYTILINENCNMG 668
>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
Length = 674
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/384 (20%), Positives = 161/384 (41%), Gaps = 24/384 (6%)
Query: 161 ETGFRVYEWM-MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFH 219
E +EW+ + Y + + + R+ + +++ +G P TF
Sbjct: 123 EKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFS 182
Query: 220 ILIVAYLSAPVQGCL--DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
LI + C +EA + RM + G P +NS+ + G + + +
Sbjct: 183 TLINC-----AKRCRQPEEALKWFERM-KSEGIVPDEVTYNSV----IDMYGRVGR--VN 230
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
+A ++ L + ++ Y + + Y D + I L +EM+ +G ++ +
Sbjct: 231 EAVELYEKLKSVNWKLDTVTYGAIA--NVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNT 288
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGI-PTPAFVYKM-EAYAKIGEFMKSLEIFREMQE 395
++ +K G V A+K + + S G+ PTP + + E Y ++G + ++ E++ ++
Sbjct: 289 LMGTLSKAGKVNQAKKVFNEMRTS--GVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKT 346
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
V Y+ +++ + E E ++KE G P +Y N Y GM D
Sbjct: 347 EGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDP 406
Query: 456 LHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
F + + +P+ ++ + + + K AG IE+A +IF+ M + R ++L
Sbjct: 407 ARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMESGCCSPDERVSGMLL 466
Query: 515 SAYLSSGDFVKAEKIYDLMCLKKY 538
S + + E++ L CL K+
Sbjct: 467 SCMAMAKN--DDERLAILDCLDKF 488
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 163/413 (39%), Gaps = 37/413 (8%)
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL-FRALVSKPGG 270
VP + + +I A + +EA RM + L N L +R L+ G
Sbjct: 39 VPDTVLYTKMISGLCEASL---FEEAMDFLTRM------RASSCLPNVLTYRILLC--GC 87
Query: 271 LSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE 330
L+K L + + I ++T G I++ L+ H+Y + D L K+M Q G +
Sbjct: 88 LNKEKLGRCKRILSMMITEGCYPSPRIFNSLV--HAYCRSGDYAYAYKLLKKMVQCGCQP 145
Query: 331 GKEVL-LSVLRVCAKE---GDVED-AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMK 385
G V + + +C+ E DV D AEK + +LE+ + IG+F K
Sbjct: 146 GYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEK 205
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+ + REM + Y K+I LC A + E L +E G+ P + Y L +
Sbjct: 206 AYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLID 265
Query: 446 MYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
+ G ++ F E +E+ C PN Y + + + + KA E++ M S +
Sbjct: 266 SFCKAGFIEQARNWFDE-MERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLS-KGC 323
Query: 504 GVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPV 563
N + ++ +G KA +IY +M + EI M V
Sbjct: 324 TPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMH--------------FRV 369
Query: 564 SLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYD 616
S+E G L+ GLC K R +++ E + V+ L D
Sbjct: 370 VDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALID 422
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 148/355 (41%), Gaps = 49/355 (13%)
Query: 165 RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
R++ ++ + D+A A KL +K +C G P + ++ILI
Sbjct: 113 RIFNSLVHAYCRSGDYAYAYKLL------KKMVQC----------GCQPGYVVYNILIGG 156
Query: 225 YLSA--PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
S+ P + LD A Y M++ G + ++ N R L G+ K+ ++A +
Sbjct: 157 ICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISN-FSRCLC----GIGKF--EKAYNV 209
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK-ERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+++ G YS +I Y N K E+ L +EM++ G V +++
Sbjct: 210 IREMMSKGFIPDTSTYSKVI---GYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDS 266
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
K G +E A + W +E D P + + AY K + K+ E++ M + +
Sbjct: 267 FCKAGFIEQA-RNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTP 325
Query: 401 SVPAYHKIIELLCKAEETELTESLMK-------EFVETGMK-PLMPSYINLTNMYLNLGM 452
++ Y +I+ LCKA + E + K E + M ++ N N++ +
Sbjct: 326 NIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGAL 385
Query: 453 HDRLHLAF----------SECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
D L A+ S +E C PN +Y ++ AG +++A+E+F M
Sbjct: 386 VDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTM 440
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 154/387 (39%), Gaps = 59/387 (15%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E F++++ M +++ D + T L D K + R+ FD++ G P+ +T+
Sbjct: 239 EKAFQLFQEM-KRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTA 297
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK----YYL 276
LI AYL + + +A +Y M+ G P + +L L K G + K Y +
Sbjct: 298 LIHAYLKSRK---VSKANEVYEMMLS-KGCTPNIVTYTALIDGLC-KAGKIEKASQIYKI 352
Query: 277 QQAEFI------FHNLLTSGLEIQKDI--YSGLI--WLHSYQDNIDKERISLLKKEMQQA 326
+ E + H + G + ++ Y L+ +YQ KE LLK M
Sbjct: 353 MKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQV---KEARDLLK-SMSVE 408
Query: 327 GFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKS 386
G E V +++ C K G +++A++ + +LE + ++ K +
Sbjct: 409 GCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLA 468
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNM 446
L++ +M E + +V Y ++I+ LCK +T+ LM E G
Sbjct: 469 LKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKG-------------- 514
Query: 447 YLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN 506
C PN Y ++ +G +EK E+ M S + N
Sbjct: 515 --------------------CNPNVVTYTAMIDGFGKSGRVEKCLELLQQM-SSKGCAPN 553
Query: 507 TRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ ++++ S+G +A K+ + M
Sbjct: 554 FVTYRVLINHCCSTGLLDEAHKLLEEM 580
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 162/358 (45%), Gaps = 31/358 (8%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + + K KF + + ++ ++G P+E F+ LI Y +G +D+A + + M
Sbjct: 317 LVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGY---SRKGNMDDALRVRDDM- 372
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
L G +P HN+L + G ++QAE + LL++ L + +D S ++ L
Sbjct: 373 TLKGLKPNAVTHNTLLQ------GFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLL 426
Query: 306 SYQDNID---KERISLLKKEMQQAGFEEGKEVLLSVLRVCA--KEGDVEDAEKTWLRLLE 360
D K +LL + ++ + LL++L VC K G +A W RL +
Sbjct: 427 CKSSKFDSALKIVKALLLRNIKV------NDSLLTLL-VCGLCKCGKHLEAIDLWFRLAD 479
Query: 361 ----SDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
+ N + A +Y + + G + + +EM ER +Y+ +I CK+
Sbjct: 480 KKGLAANTTTSNALLYGL---CERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSG 536
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYG 475
+ E L ++ ++ G KP +Y L + G D + E + PN Y
Sbjct: 537 KIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYA 596
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ LE NA I+ A +FN + ++ + ++ NI+++A+ +G+F +A K+ D M
Sbjct: 597 LMLEGYCNADRIDNAVSLFNKLVYNK-VELSYVVYNILIAAHSKAGNFTEAFKLRDAM 653
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 116/298 (38%), Gaps = 44/298 (14%)
Query: 236 EACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQK 295
EA ++ R+ G + N+L L + G + + + E + L+ G+
Sbjct: 469 EAIDLWFRLADKKGLAANTTTSNALLYGLCER-GNMEEVFPVCKEMVERGLVLDGIS--- 524
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK-- 353
Y+ LI+ I E LK++M + GF+ +++ A +G ++D +
Sbjct: 525 --YNTLIFGCCKSGKI--EEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVL 580
Query: 354 -------------TWLRLLES-------DNGIPT-PAFVYK------------MEAYAKI 380
T+ +LE DN + VY + A++K
Sbjct: 581 HEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKA 640
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G F ++ ++ M+ ++ Y II +C + E + + +E G+ P + Y
Sbjct: 641 GNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCY 700
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
L Y LG D++ E C +PN+ Y I ++ GN ++A ++ N M
Sbjct: 701 TALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEM 758
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 18/233 (7%)
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
G+ + Y + AY K G+ +++ +F +M E +V Y+ +I+ LCK+ E
Sbjct: 236 GVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLE-- 293
Query: 422 ESLM--KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYL 478
E+LM VE + P + +Y L N + D + E K PN ++ +
Sbjct: 294 EALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALI 353
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKY 538
+ GN++ A + + M + + + N + N +L + + +AE++ + +
Sbjct: 354 DGYSRKGNMDDALRVRDDM-TLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLL---S 409
Query: 539 EIESAWMEKLDYVLSLNRKEVKKPVSLNL-------SSEQRENLIGLLLGGLC 584
+ S + YVL L K K +L + + + ++L+ LL+ GLC
Sbjct: 410 NVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLC 462
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 120/275 (43%), Gaps = 13/275 (4%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
+ GFR+ + M++ R D + L + + KE K +F ++ +G +P+++ F
Sbjct: 292 DVGFRL-KHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTT 350
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
LI + G +D Y +M+ G QP L+N+L K G L A
Sbjct: 351 LIHGHSR---NGQIDLMKESYQKMLS-KGLQPDIVLYNTLVNGF-CKNGDLV-----AAR 400
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
I ++ GL K Y+ LI + D + ++KEM Q G E + +++
Sbjct: 401 NIVDGMIRRGLRPDKVTYTTLI--DGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALIC 458
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
KEG V DAE+ +L + + M+A+ K G+ ++ +EMQ
Sbjct: 459 GMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIP 518
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+V Y+ ++ LCK + + + L+ + G+ P
Sbjct: 519 NVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVP 553
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 122/313 (38%), Gaps = 13/313 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + KE + +FD+I + P+ ++F+ LI Y G LD + + M
Sbjct: 246 LMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKV---GNLDVGFRLKHHM- 301
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ +P +++L AL + + A +F+ + GL I++ LI H
Sbjct: 302 EKSRTRPDVFTYSALINALCKENK------MDGAHRLFYEMCERGLIPNDVIFTTLIHGH 355
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
S ID + S ++M G + + +++ K GD+ A ++
Sbjct: 356 SRNGQIDLMKESY--QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
+ ++ + + G+ +LEI +EM + + +I +CK E +
Sbjct: 414 DKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERAL 473
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-PNRTIYGIYLESLKNA 484
+E + GMKP +Y + + + G E PN Y + L L
Sbjct: 474 REMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKL 533
Query: 485 GNIEKAEEIFNHM 497
G ++ A+ + + M
Sbjct: 534 GQMKNADMLLDAM 546
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 71/177 (40%), Gaps = 1/177 (0%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
E+ AGF V ++ KEG++ DA+K + + + +F + Y K+G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVG 289
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ M++ V Y +I LCK + + L E E G+ P +
Sbjct: 290 NLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFT 349
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
L + + G D + ++ + L K +P+ +Y + G++ A I + M
Sbjct: 350 TLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 16/320 (5%)
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+T++ LI AY +G L+EA I N M G +P +N++ L K +Y
Sbjct: 2 VTYNTLIGAYCR---EGLLEEAFEIMNSMAD-KGLKPSLFTYNAIINGLCKK----GRY- 52
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+A+ I +L GL Y+ L+ +DN + + + EM + G
Sbjct: 53 -ARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAK--EIFGEMLRQGVVPDLVSF 109
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQ 394
S++ V ++ ++ A + R ++ +P + M Y + G +++L+I EM
Sbjct: 110 SSLMAVFSRNRHLDQA-LVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEML 168
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MH 453
E+ V AY+ I+ LCK + + L E VE G P ++ L + + G M
Sbjct: 169 EQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMT 228
Query: 454 DRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
L L + +P+ Y ++ G +EKA E+++ M S + I N + I+
Sbjct: 229 KALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMIS-RKIFPNHITYGIL 287
Query: 514 LSAYLSSGDFVKAEKIYDLM 533
++AY S G +A +++D+M
Sbjct: 288 INAYCSVGHVSEAFRLWDVM 307
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 138/345 (40%), Gaps = 47/345 (13%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K+ ++A+ + I +++N G P T++ L+V + + EA I+ M++ G
Sbjct: 48 KKGRYARAKGILIEMLNIGLSPDTTTYNTLLV---ESCRRDNFSEAKEIFGEMLRQGVVP 104
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
S S A+ S+ +L QA F ++ GL IY+ + +H Y N
Sbjct: 105 DLVSF--SSLMAVFSR-----NRHLDQALVYFRDMKKFGLVPDNVIYT--VLMHGYCRNG 155
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
+ ++ EM + G ++L KE + DA+K + ++E F
Sbjct: 156 NMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFT 215
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
+ + + G K+L +F M +R + AY+ +I+ CK E E L
Sbjct: 216 TLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWD----- 270
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAE 491
GM R K PN YGI + + + G++ +A
Sbjct: 271 -------------------GMISR----------KIFPNHITYGILINAYCSVGHVSEAF 301
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
+++ M ++ I +CN ++ Y SGD KA++ M K
Sbjct: 302 RLWDVM-IEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAK 345
>gi|125537564|gb|EAY84052.1| hypothetical protein OsI_39281 [Oryza sativa Indica Group]
Length = 762
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 7/233 (3%)
Query: 304 LHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+H+Y + N +E + + + EMQ+AG+E + +++ + AK G +E A + R+ E
Sbjct: 408 IHAYGRANYLREAVKVFE-EMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEV- 465
Query: 363 NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
G+ F Y + K G + ++F EM E + ++ Y+ +I L KA E
Sbjct: 466 -GLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYEN 524
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLES 480
L K+ G +P +Y + + + G D F E P+ +YG+ ++
Sbjct: 525 VVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDWAPDEPVYGLLVDL 584
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
AGN++KA ++ M D + N +CN +LSA+L F A + M
Sbjct: 585 WGKAGNVDKALGWYHAMLQD-GLQPNVPTCNSLLSAFLKINRFQDAYSVLQNM 636
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 130/314 (41%), Gaps = 38/314 (12%)
Query: 157 IRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEM 216
+ ++ ++W+ +Q ++ D T + +G+ R+F R + D++ + P+ +
Sbjct: 343 LHDHTIALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVV 402
Query: 217 TFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG------- 269
T++ +I AY A L EA ++ M Q GY+P + +L + +K G
Sbjct: 403 TYNRIIHAYGRA---NYLREAVKVFEEM-QKAGYEPDRVTYCTLID-IHAKGGYLEVAMD 457
Query: 270 --------GLSK---------------YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHS 306
GLS +L A +F ++ +G Y+ +I L +
Sbjct: 458 LYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQA 517
Query: 307 YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
N E + L K+MQ AGF K V+ V G +++AE ++ + D
Sbjct: 518 KARNY--ENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIE-MRHDWAPD 574
Query: 367 TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
P + ++ + K G K+L + M + +VP + ++ K + S+++
Sbjct: 575 EPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQ 634
Query: 427 EFVETGMKPLMPSY 440
+ G+ P + +Y
Sbjct: 635 NMLAQGLVPSLQTY 648
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 88/450 (19%), Positives = 171/450 (38%), Gaps = 66/450 (14%)
Query: 147 GTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDI 206
G+++A ++ T + W +Q ++ D L + + E+ +++C I +++
Sbjct: 86 GSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEM 145
Query: 207 INQGRVPSEMTFHILIVAY-------------------------------LSAPVQGCLD 235
+ G P+ +F+ILI ++ + + +D
Sbjct: 146 LKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMD 205
Query: 236 E-ACSIYNRMIQLGGYQPRPSLHNSLFRALVS---------------KPG---------- 269
E A +++ M+ +G P +LH ++ R L+ K G
Sbjct: 206 EKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNT 265
Query: 270 ---GLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
GL+K + Q+A + N+L + Y I ++S ER L + M
Sbjct: 266 MIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG--ILVNSLCKAGTLERAEELFRVMAA 323
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMK 385
+GF + S++ AK G +++A + ++E+ ++ K G F +
Sbjct: 324 SGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQ 383
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+ + F EM +V Y II+ L K +MK + G P +YI L +
Sbjct: 384 AAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLD 443
Query: 446 MYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
+ LG D E L+KC PN +Y ++ L + G++E +
Sbjct: 444 GFCKLGRLDEAAQLLDE-LDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAE 502
Query: 504 GVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++ C I+ +G +A +I+ M
Sbjct: 503 NLDPGLCCSIIVGLCKTGRLDEACRIFQRM 532
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/384 (18%), Positives = 160/384 (41%), Gaps = 54/384 (14%)
Query: 160 NETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIF---------------- 203
+E F V+ MM + D AL T + + K ++ + R++F
Sbjct: 205 DEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYN 264
Query: 204 -------------------DDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM 244
D+++ + VP+E+T+ IL+ + A G L+ A ++ R+
Sbjct: 265 TMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKA---GTLERAEELF-RV 320
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
+ G++P ++ SL +K G +++A +F ++ +G + D+ + + +
Sbjct: 321 MAASGFRPNSVIYTSLIHGF-AKSG-----RMKEACSLFDEMVEAGY--RPDVITHTVMI 372
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
+ + E+ + +EM + G + ++++ +K G V +A + ++
Sbjct: 373 DGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCF 432
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
+ ++ ++ + K+G ++ ++ E+ + S ++ Y +++ LC E T
Sbjct: 433 PDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDD 492
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECL-EKCRPNRTIYGIYLES 480
+ E + + L P ++ + L RL A F + E C+P+ T Y I +
Sbjct: 493 LFEQSKAAAENLDPGLC--CSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIG 504
L + + E F +H + +G
Sbjct: 551 LCRSRE-NRVERAFALLHDLEMVG 573
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 146/380 (38%), Gaps = 43/380 (11%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E + +E MM+ + + T + + K + A I +I G P +T+
Sbjct: 382 EQAAKSFEEMMRGGC-KPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYIC 440
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ + G LDEA + + + + P L++SL + L GG + L
Sbjct: 441 LLDGFCKL---GRLDEAAQLLDELDKCSS-SPNLQLYSSLVKGLCD--GGSVENTLDD-- 492
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+F + + + +I +D E + ++ + + + + +
Sbjct: 493 -LFEQSKAAAENLDPGLCCSIIVGLCKTGRLD-EACRIFQRMVSEGCKPDATTYNILING 550
Query: 341 VC-AKEGDVEDAEKTWLRLLESDNGIP-----TPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
+C ++E VE A L LE +P TP + KIGE +++++ E
Sbjct: 551 LCRSRENRVERA-FALLHDLEMVGYLPDAVTYTPLCI----GLCKIGEVDRAVKMLEEAS 605
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
R +A V AY + LC + + SL +E V G P +Y + N + +
Sbjct: 606 SRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLE 665
Query: 455 RLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
F E + K +P Y +++L +AGN+++A F M
Sbjct: 666 DACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGM---------------- 709
Query: 514 LSAYLSSGDFVKAEKIYDLM 533
L+ G+ V + IYD +
Sbjct: 710 ----LARGELVGSVMIYDAL 725
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 163/357 (45%), Gaps = 27/357 (7%)
Query: 217 TFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH--NSLFRALVSKPGGLSKY 274
++ LI AY ++ GC ++A +++N M++ G P P++ N L +AL+ G L +
Sbjct: 772 VWNALIQAYAAS---GCYEQARAVFNTMMRDG---PSPTVDSINGLLQALIVD-GRLEEL 824
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
Y+ + + G +I K S L+ L ++ + + + M+ AG+ +
Sbjct: 825 YV-----VTQEIQDMGFQISKS--SILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHL 877
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
++ + K V D E + E+ + + Y I +F K+++I++ ++
Sbjct: 878 YRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIK 937
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
E Y+ +I + C+ E SLM E G++P + +Y +L + +
Sbjct: 938 EDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVV 997
Query: 455 RLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
F E L K + +R+ Y I ++ +N+GN KAE++ + M D + + +++
Sbjct: 998 DAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMK-DAGVEPTIATMHLL 1056
Query: 514 LSAYLSSGDFVKAEKI--------YDLMCLKKYEIESAWMEKLDYVLSLNR-KEVKK 561
+ +Y SSG +AEK+ L L + A+++ DY + + + E+KK
Sbjct: 1057 MVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQKLVEMKK 1113
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/378 (19%), Positives = 147/378 (38%), Gaps = 51/378 (13%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKER-------------------------- 194
+ V+EW+ +HWY + + + +GK
Sbjct: 157 QRALEVFEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFIRAESTVDNTVQVYNAM 216
Query: 195 --------KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQ 246
+F K + + D + +G P ++F+ LI A L A + A + N ++
Sbjct: 217 MGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAM-TPNVAIELLNE-VR 274
Query: 247 LGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHS 306
G +P +N+L A + L++A +F ++ Q D+++ +
Sbjct: 275 RSGLRPDIITYNTLISACSRESN------LEEAVKVFDDM--EAHYCQPDLWTYNAMISV 326
Query: 307 YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
Y + L KE++ G+ S+L A+EG+V+ ++ +++ G
Sbjct: 327 YGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQM--GFI 384
Query: 367 TPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
Y + Y K G+ +L+++R+M+ + Y +I+ L KA + ++
Sbjct: 385 RDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANV 444
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLESLK 482
M E + G+KP + +Y L Y G F +C+ + RP++ Y + L+
Sbjct: 445 MSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETF-DCMRRSGIRPDQLAYSVMLDVFL 503
Query: 483 NAGNIEKAEEIFNHMHSD 500
KA ++ M D
Sbjct: 504 RFDEATKAMMLYREMVRD 521
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 22/230 (9%)
Query: 171 MQQHWYRFDFAL-ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
M++ +R D ++ + L Y G + F K I+ I G P E T++ LIV Y
Sbjct: 901 MEEAGFRPDLSIWNSMLRLYTGID-DFRKTVQIYQRIKEDGLQPDEDTYNTLIVMY---- 955
Query: 230 VQGCLD----EACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHN 285
C D E CS+ + M ++G +P+ + SL A + + AE +F
Sbjct: 956 ---CRDHRPEEGCSLMHEMRRIG-LEPKLDTYKSLIAAFGKQQ------LVVDAEELFEE 1005
Query: 286 LLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKE 345
LL+ G ++ + Y I + Y+++ + + L M+ AG E + ++
Sbjct: 1006 LLSKGSKLDRSFYH--IMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSS 1063
Query: 346 GDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
G ++AEK L E + T + ++AY K ++ ++ EM++
Sbjct: 1064 GQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQKLVEMKK 1113
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/254 (18%), Positives = 108/254 (42%), Gaps = 11/254 (4%)
Query: 197 AKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSL 256
A+ IF D+ G PS+ + +++ Y C + +I L + P
Sbjct: 681 AEASQIFSDMRFNGVKPSKSLYRSMVLMY-------CKMGFPETAHYLIDLAEIEGMPFD 733
Query: 257 HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERI 316
S+ A++ G L + Q+AE + NL + + +++ LI ++ ++ R
Sbjct: 734 KISIDVAVIETYGKLKLW--QKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARA 791
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEA 376
M + G + + +L+ +G +E+ + + I + + ++A
Sbjct: 792 VF--NTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDA 849
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
+A++ ++ +I++ M+ ++ Y +I LLCK + E+++ E E G +P
Sbjct: 850 FARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPD 909
Query: 437 MPSYINLTNMYLNL 450
+ + ++ +Y +
Sbjct: 910 LSIWNSMLRLYTGI 923
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 143/338 (42%), Gaps = 26/338 (7%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
++FD++ + +P+ +T++ +I ++ G L+ + ++M+ G +P +N L
Sbjct: 221 EVFDEMTERAVLPNHITYNTMIDGHIKG---GDLEAGFRLRDQMV-CHGLKPNAITYNVL 276
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID-KERISLL 319
L + G + + E ++ G YS I N D K +SL
Sbjct: 277 LSGLC-RAGRMGETSALLDEMASQKMVPDGF-----TYS--ILFDGLSRNGDSKAMLSLF 328
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAY 377
K ++ G G +L K+G V AE+ L+ + G+ +Y + Y
Sbjct: 329 GKYLKN-GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA--GLVPTRVIYNTLINGY 385
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
+ GE + F +M+ R Y+ +I LCKAE + L+ E + G+ P +
Sbjct: 386 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 445
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
++ L + Y G ++ + SE E +PN YG + + G I +A I +
Sbjct: 446 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 505
Query: 497 M-HSDQTIGVNTRSCNIILSAYLSSGD----FVKAEKI 529
M H D + N + N I+ AY+ G F+ EK+
Sbjct: 506 MFHKD--VLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 541
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 148/356 (41%), Gaps = 20/356 (5%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + + K+ K + ++ ++N G VP+ + ++ LI Y G L+ A S + +M
Sbjct: 346 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT---GELEGAFSTFGQM- 401
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ +P +N+L L + A+ + + +G+ + ++ LI +
Sbjct: 402 KSRHIKPDHITYNALINGLCKAE------RITNAQDLLMEMQDNGVNPTVETFNTLIDAY 455
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
++K I L EMQ+ G + S++ K G + +A + D +
Sbjct: 456 GRTGQLEKCFIVL--SEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD--V 511
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
A VY ++AY + G ++ + +M+ S S+ Y+ +I+ LC + E
Sbjct: 512 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 571
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI--YGIYLESL 481
++ + P SY L + G D+ L + + K T+ Y + L
Sbjct: 572 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKA-LDLQQRMHKYGIKSTVRTYHQLISGL 630
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
AG + + E ++ M + + N NI++ AY G+ +KAE + M K+
Sbjct: 631 GGAGRLNEMEYLYQKMMQNNVVPSNAIH-NIMVEAYSKYGNEIKAEDLRKEMLQKR 685
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 154/342 (45%), Gaps = 20/342 (5%)
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS 255
F R++F D+ +G PS +T++++I A +G L+EAC + +MI+ G+ P
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCK---RGMLEEACDLIKKMIE-DGHVPDVV 116
Query: 256 LHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER 315
+N++ L K G +++A +F+ + G + ++ +I Q ID+
Sbjct: 117 TYNTVMDGLC-KSG-----RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA- 169
Query: 316 ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME 375
+ EM+ ++ AK G + +A K + R+L D+GI A Y +
Sbjct: 170 -CQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRML--DSGITPSAVTYNVV 226
Query: 376 AYAKIGEFM--KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ + ++LE+F+ M+ + S ++ +I+ CK + + L+K + G
Sbjct: 227 IHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGH 286
Query: 434 KPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
P + +Y L + ++ + D HL +C+P + L AG I++A E
Sbjct: 287 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEARE 346
Query: 493 IFNHM-HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ + M S Q+ V T N ++ + +G +A ++ M
Sbjct: 347 VLDAMVSSGQSPDVVTY--NTLVHGHCRAGQTERARELLSDM 386
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
AK G + DA + +LL S T A+ + F + E+F +M R S
Sbjct: 21 AKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSP 80
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
Y+ II+ CK E L+K+ +E G P + +Y + + G + L F+E
Sbjct: 81 VTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNE 140
Query: 463 CLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSS 520
+E+ C PNR + + L I++A ++F+ M + + I ++ S I++ +
Sbjct: 141 -MERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEA-RDIPPDSWSYGILIDGLAKA 198
Query: 521 GDFVKAEKIYDLM 533
G +A K++ M
Sbjct: 199 GKLNEAYKLFRRM 211
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 125/313 (39%), Gaps = 25/313 (7%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
++ K + +F ++ + P ++ ILI A G L+EA ++ RM+ G
Sbjct: 162 QQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKA---GKLNEAYKLFRRMLD-SGIT 217
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P +N + + Y L +A +F ++ + G + ++ LI H + +
Sbjct: 218 PSAVTYNVVIHGMCLA------YTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKM 271
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
D E LLK+ M G +++ V+DA +++ P V
Sbjct: 272 D-EAFRLLKR-MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC---KPTVV 326
Query: 372 YK---MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
+ + K G ++ E+ M S V Y+ ++ C+A +TE L+ +
Sbjct: 327 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECLEK-CRPNRTIYGIYLESLKNA 484
V G+ P + +Y L + L +RL A F++ C PN Y + +A
Sbjct: 387 VARGLAPNVVTYTALVS---GLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 443
Query: 485 GNIEKAEEIFNHM 497
G ++ ++F M
Sbjct: 444 GQVDGGLKLFGEM 456
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 155/354 (43%), Gaps = 20/354 (5%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + F R++F D+ +G PS +T++++I A +G L+EAC + +
Sbjct: 49 TSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCK---RGMLEEACDLIKK 105
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
MI+ G+ P +N++ L +++A +F+ + G + ++ +I
Sbjct: 106 MIE-DGHVPDVVTYNTVMDGLCKSS------RVEEALLLFNEMERLGCTPNRRSHNTIIL 158
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
Q ID+ + EM+ ++ AK G + +A K + R+L D+
Sbjct: 159 GLCQQSKIDQA--CQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRML--DS 214
Query: 364 GIPTPAFVYKMEAYAKIGEFM--KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
GI A Y + + + ++LE+F+ M+ + S ++ +I+ CK + +
Sbjct: 215 GITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEA 274
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLES 480
L+K + G P + +Y L + ++ + D HL +C+P +
Sbjct: 275 FRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 334
Query: 481 LKNAGNIEKAEEIFNHM-HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
L AG I++A E+ + M S Q+ V T N ++ + +G +A ++ M
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTY--NTLVHGHCRAGQTERARELLSDM 386
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 4/193 (2%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
AK G + DA + +LL S T A+ + F + E+F +M R S
Sbjct: 21 AKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSP 80
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
Y+ +I+ CK E L+K+ +E G P + +Y + + + L F+E
Sbjct: 81 VTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNE 140
Query: 463 CLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSS 520
+E+ C PNR + + L I++A ++F+ M + + I ++ S I++ +
Sbjct: 141 -MERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEA-KDIPPDSWSYGILIDGLAKA 198
Query: 521 GDFVKAEKIYDLM 533
G +A K++ M
Sbjct: 199 GKLNEAYKLFQRM 211
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 125/313 (39%), Gaps = 25/313 (7%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
++ K + +F ++ + P ++ ILI A G L+EA ++ RM+ G
Sbjct: 162 QQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKA---GKLNEAYKLFQRMLD-SGIT 217
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P +N + + Y L +A +F ++ + G + ++ LI H + +
Sbjct: 218 PSAVTYNVVIHGMCLA------YTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKL 271
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
D E LLK+ M G +++ V+DA +++ P V
Sbjct: 272 D-EAFRLLKR-MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC---KPTVV 326
Query: 372 YK---MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
+ + K G ++ E+ M S V Y+ ++ C+A +TE L+ +
Sbjct: 327 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECLEK-CRPNRTIYGIYLESLKNA 484
V G+ P + +Y L + L +RL A F++ C PN Y + +A
Sbjct: 387 VARGLAPNVVTYTALVS---GLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 443
Query: 485 GNIEKAEEIFNHM 497
G ++ ++F M
Sbjct: 444 GQVDGGLKLFGEM 456
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 154/361 (42%), Gaps = 16/361 (4%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
+ L +Y+ K + + R IFD + +G P T+ L+ Y + +G L E ++ +
Sbjct: 310 SSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT---KGALVEMHALLDL 366
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M++ G QP + N L A + + QA +F + GL Y +I
Sbjct: 367 MVR-NGIQPDHHVFNILICAYAKQE------KVDQAMLVFSKMRQHGLNPNVVCYGTVID 419
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ ++D + ++M G V S++ + AE+ L +L+
Sbjct: 420 VLCKSGSVDDAMLYF--EQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELLCKAEETELTE 422
+ T F ++++ K G ++S ++F ++ R+G + Y+ +I+ C A + +
Sbjct: 478 CLNTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESL 481
L+ V G+KP + +Y L N Y + D F E + PN Y I L+ L
Sbjct: 537 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIE 541
+ A+E++ + T + + NIIL + +A +++ +CL ++E
Sbjct: 597 FHTRRTAAAKELYVSITKSGT-QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLE 655
Query: 542 S 542
+
Sbjct: 656 T 656
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 140/343 (40%), Gaps = 24/343 (6%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN- 258
R +FD+++ +GR S + L+ + A S YNRM + G + P++H
Sbjct: 40 RHVFDELLRRGRGASIYGLN----RALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTY 95
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
++ + G L + N++ G + ++ L+ D + + +
Sbjct: 96 AILIGCCCRAGRLDLGFAA-----LGNVVKKGFRVDAITFTPLLK-GLCADKRTSDAMDI 149
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK----M 374
+ + M + G ++L+ E ++A + L ++ D G +P V +
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALE-LLHMMADDRGGGSPPDVVSYNTVL 208
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
+ K G+ K+ + EM +R V Y II LCKA+ + ++ V+ G+
Sbjct: 209 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVM 268
Query: 435 PLMPSYINLTNMYLNLGMHDR----LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKA 490
P +Y ++ + Y + G L S+ +E PN Y + L G +A
Sbjct: 269 PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE---PNVVTYSSLMNYLCKNGRSTEA 325
Query: 491 EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+IF+ M + + + + + +L Y + G V+ + DLM
Sbjct: 326 RKIFDSM-TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM 367
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 154/361 (42%), Gaps = 16/361 (4%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
+ L +Y+ K + + R IFD + +G P T+ L+ Y + +G L E ++ +
Sbjct: 310 SSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT---KGALVEMHALLDL 366
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M++ G QP + N L A + + QA +F + GL Y +I
Sbjct: 367 MVR-NGIQPDHHVFNILICAYAKQE------KVDQAMLVFSKMRQHGLNPNVVCYGTVID 419
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ ++D + ++M G V S++ + AE+ L +L+
Sbjct: 420 VLCKSGSVDDAMLYF--EQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELLCKAEETELTE 422
+ T F ++++ K G ++S ++F ++ R+G + Y+ +I+ C A + +
Sbjct: 478 CLNTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESL 481
L+ V G+KP + +Y L N Y + D F E + PN Y I L+ L
Sbjct: 537 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIE 541
+ A+E++ + T + + NIIL + +A +++ +CL ++E
Sbjct: 597 FHTRRTAAAKELYVSITKSGT-QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLE 655
Query: 542 S 542
+
Sbjct: 656 T 656
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 140/343 (40%), Gaps = 24/343 (6%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN- 258
R +FD+++ +GR S + L+ + A S YNRM + G + P++H
Sbjct: 40 RHVFDELLRRGRGASIYGLN----RALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTY 95
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
++ + G L + N++ G + ++ L+ D + + +
Sbjct: 96 AILIGCCCRAGRLDLGFAA-----LGNVVKKGFRVDAITFTPLLK-GLCADKRTSDAMDI 149
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK----M 374
+ + M + G ++L+ E ++A + L ++ D G +P V +
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALE-LLHMMADDRGGGSPPDVVSYNTVL 208
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
+ K G+ K+ + EM +R V Y II LCKA+ + ++ V+ G+
Sbjct: 209 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVM 268
Query: 435 PLMPSYINLTNMYLNLGMHDR----LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKA 490
P +Y ++ + Y + G L S+ +E PN Y + L G +A
Sbjct: 269 PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE---PNVVTYSSLMNYLCKNGRSTEA 325
Query: 491 EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+IF+ M + + + + + +L Y + G V+ + DLM
Sbjct: 326 RKIFDSM-TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM 367
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 166/402 (41%), Gaps = 17/402 (4%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ D + L DY+ K + + R IFD + +G P T+ L+ Y +
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT--- 348
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G L E + + M++ G P + +F L+ K + QA +F + G
Sbjct: 349 KGALVEMHGLLDLMVR-NGIHP----DHYVFSILICAYANQGK--VDQAMLVFSKMRQQG 401
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
L Y +I + + E L ++M G G V S++ E
Sbjct: 402 LNPNAVTYGAVIGILCKSGRV--EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 459
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKII 409
AE+ L +L+ + T F ++++ K G ++S ++F E+ R+G +V Y+ +I
Sbjct: 460 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF-ELMVRIGVKPNVITYNTLI 518
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCR 468
C A + + L+ V G+KP +Y L N Y + M D L L
Sbjct: 519 NGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVS 578
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
P+ Y I L+ L A+E++ + T + + NIIL + A +
Sbjct: 579 PDIITYNIILQGLFQTRRTAAAKELYVRITESGT-QIELSTYNIILHGLCKNKLTDDALQ 637
Query: 529 IYDLMCLKKYEIES-AWMEKLDYVLSLNRKEVKKPVSLNLSS 569
++ +CL ++E+ + +D +L + R + K + + SS
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSS 679
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 141/344 (40%), Gaps = 26/344 (7%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN- 258
R +FD+++ +GR S + L+ + A S YNRM + G + P L
Sbjct: 35 RHVFDELLRRGRGASIYGLN----RALADVARDSPAAAVSRYNRMARAGADEVTPDLCTY 90
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
+ + G L + N++ G + ++ L+ D + + +
Sbjct: 91 GILIGCCCRAGRLDLGFAA-----LGNVIKKGFRVDAIAFTPLLK-GLCADKRTSDAMDI 144
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP----AFVYKM 374
+ + M + G +L+ E ++A + L ++ D G +P ++ +
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALE-LLHMMADDRGGGSPPDVVSYTTVI 203
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
+ K G+ K+ + EM +R V Y+ II LCKA+ + ++ V+ G+
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM 263
Query: 435 PLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-----PNRTIYGIYLESLKNAGNIEK 489
P +Y ++ + Y + G + + F L+K R P+ Y + ++ L G +
Sbjct: 264 PDCMTYNSILHGYCSSG-QPKEAIGF---LKKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A +IF+ M + + + + +L Y + G V+ + DLM
Sbjct: 320 ARKIFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 362
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 161/372 (43%), Gaps = 53/372 (14%)
Query: 197 AKCRDIFDDIINQGRVPSEMTFHILIVAYL-SAPVQGCLDEACSIYNRMIQLGGYQPRPS 255
+K +++ + G P+ +T++ L+ +Y VQ LD + R G P
Sbjct: 216 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRR-----GCAPNDV 270
Query: 256 LHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER 315
+N L L SK G +QA+ + +L +GL++ Y+ LI+ + + + E
Sbjct: 271 TYNVLINGL-SKKGEF-----EQAKGLIGEMLKTGLKVSAYTYNPLIYGY-FNKGMLAEA 323
Query: 316 ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKM 374
+SL ++EM G S + K G + DA + +L ++N +P ++ +
Sbjct: 324 LSL-QEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDML-ANNLLPDVVSYNTLI 381
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
Y ++G MK+ +F E++ ++ Y+ +++ LC+ E E+ + L E + G+
Sbjct: 382 YGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 441
Query: 435 PLMPSYINLTNMYLNLG------------MHDRLHL--------------------AFS- 461
P + +Y L N +G +H+ L L AFS
Sbjct: 442 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 501
Query: 462 --ECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
E L K P+ IY + ++ L GN+E+A E+ M SD I +II A+L
Sbjct: 502 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSII-HAHL 560
Query: 519 SSGDFVKAEKIY 530
+G K +I+
Sbjct: 561 ENGRLRKGREIF 572
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 113/547 (20%), Positives = 221/547 (40%), Gaps = 55/547 (10%)
Query: 131 LVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFR--------VYEWMMQQHWYRFDFAL 182
VR+L++ + R +A+ R E++ GFR + E + Q + R
Sbjct: 84 FVRVLSSFRTSPR------MALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMR----- 132
Query: 183 ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYN 242
+ Y ER D++ G V SE++ IL + + +++ S+++
Sbjct: 133 ----SAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFD 188
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
+MI+ P N + R L K + +A ++ + G++ Y+ L
Sbjct: 189 KMIK-SRLSPDVKNCNRILRILRDKD------LMSKAVEVYRTMGEFGIKPTIVTYNTL- 240
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
L SY ++ L EMQ+ G ++ +K+G+ E A+ +L++
Sbjct: 241 -LDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKT- 298
Query: 363 NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
G+ A+ Y + Y G ++L + EM + S +V Y+ I LCK
Sbjct: 299 -GLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSD 357
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLE 479
+ + + + P + SY L Y LG + L F E P Y L+
Sbjct: 358 AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLD 417
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
L G +E A+++ M ++ I + + I+++ G A++ +D M + E
Sbjct: 418 GLCRQGELEVAQQLKVEM-INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLE 476
Query: 540 IES-AWMEKLDYVLSLNRKEVKKPVSLN---LSSEQRENLI--GLLLGGLCIESDEKRKR 593
++S A+ ++ V L + + SL L+ +LI +++ GLC + +
Sbjct: 477 LDSYAYATRI--VGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEAS 534
Query: 594 HMIRFQFNENSRMHSVLRRYLYDQYHEWLHPSFKF--WPKGRLVIPKLIHRWLTPRALAY 651
+++ ++ V+ Y+ Y +H + KGR + +++ + LTP + Y
Sbjct: 535 ELLQKMVSD-----GVIPDYV--TYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTY 587
Query: 652 WFMYGGH 658
+ GH
Sbjct: 588 TVLIHGH 594
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 103/266 (38%), Gaps = 12/266 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + ++ + + + ++IN+G P +T+ IL+ G L A ++ M+
Sbjct: 415 LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCK---MGSLSMAQEFFDEML 471
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
G + + L K G S+ + Q E +L G IY+ ++
Sbjct: 472 HEGLELDSYAYATRIVGEL--KLGDTSRAFSLQEE-----MLAKGFPPDLIIYNVVVDGL 524
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
N+ E S L ++M G S++ + G + + + +L
Sbjct: 525 CKLGNL--EEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTP 582
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
+ + +A G ++ F EMQE+ +V Y+ +I LCK + +
Sbjct: 583 SVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFF 642
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLG 451
E VE G+ P SY L N N+G
Sbjct: 643 AEMVEKGIFPNKYSYTILINENCNMG 668
>gi|357159149|ref|XP_003578355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Brachypodium distachyon]
Length = 857
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 7/233 (3%)
Query: 304 LHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+H+Y + N +E + + + EM++AG+E + +++ + AK G +E A + R+ E
Sbjct: 406 IHAYGRANYLREAVKVFE-EMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEV- 463
Query: 363 NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
G+ F Y + K G+ + ++F EM E + ++ Y+ II L KA +
Sbjct: 464 -GLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAKARNYDN 522
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLES 480
L ++ G +P +Y + + + G D F E P+ +YG+ ++
Sbjct: 523 VVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGLLVDL 582
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
AGN++KA ++ M D + N +CN +LSA+L F A + M
Sbjct: 583 WGKAGNVDKALGWYHAMLQD-GLQPNVPTCNSLLSAFLKINRFQDAYSVLQNM 634
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 143/338 (42%), Gaps = 26/338 (7%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
++FD++ + +P+ +T++ +I ++ G L+ + ++M+ G +P +N L
Sbjct: 84 EVFDEMTERAVLPNHITYNTMIDGHIKG---GDLEAGFRLRDQMV-CHGLKPNAITYNVL 139
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID-KERISLL 319
L + G + + E ++ G YS I N D K +SL
Sbjct: 140 LSGLC-RAGRMGETSALLDEMASQKMVPDGF-----TYS--ILFDGLSRNGDSKAMLSLF 191
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAY 377
K ++ G G +L K+G V AE+ L+ + G+ +Y + Y
Sbjct: 192 GKYLKN-GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA--GLVPTRVIYNTLINGY 248
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
+ GE + F +M+ R Y+ +I LCKAE + L+ E + G+ P +
Sbjct: 249 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 308
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
++ L + Y G ++ + SE E +PN YG + + G I +A I +
Sbjct: 309 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 368
Query: 497 M-HSDQTIGVNTRSCNIILSAYLSSGD----FVKAEKI 529
M H D + N + N I+ AY+ G F+ EK+
Sbjct: 369 MFHKD--VLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 404
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 145/350 (41%), Gaps = 20/350 (5%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K+ K + ++ ++N G VP+ + ++ LI Y G L+ A S + +M + +
Sbjct: 215 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT---GELEGAFSTFGQM-KSRHIK 270
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P +N+L L + A+ + + +G+ + ++ LI + +
Sbjct: 271 PDHITYNALINGLCKAE------RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 324
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
+K I L EMQ+ G + S++ K G + +A + D + A V
Sbjct: 325 EKCFIVL--SEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD--VLPNAQV 380
Query: 372 YK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
Y ++AY + G ++ + +M+ S S+ Y+ +I+ LC + E ++
Sbjct: 381 YNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLS 440
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI--YGIYLESLKNAGNI 487
+ P SY L + G D+ L + + K T+ Y + L AG +
Sbjct: 441 NHRLIPDAVSYNTLISACCYRGNIDKA-LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRL 499
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
+ E ++ M + + N NI++ AY G+ +KAE + M K+
Sbjct: 500 NEMEYLYQKMMQNNVVPSNAIH-NIMVEAYSKYGNEIKAEDLRKEMLQKR 548
>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 457
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 158/387 (40%), Gaps = 56/387 (14%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
M K + AK + D I G P +T++ LI Y +D A +I NRM + G
Sbjct: 17 MCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVG---IDAAYNILNRMKE-AG 72
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY-- 307
P +NSL G + K LQ++ +F +L SG I+ D++S I +H Y
Sbjct: 73 INPDVVSYNSL------SSGAVRKCLLQKSLDLFDEMLQSG--IRPDVWSYNILMHCYFR 124
Query: 308 -----------QDNIDKERIS-----------------------LLKKEMQQAGFEEGKE 333
+D ++ I +L + +++ GF
Sbjct: 125 LGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVL 184
Query: 334 VLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFR 391
+++ K + DA + D G A Y M+ + G + LEI
Sbjct: 185 TYNAMINGLCKARRLADARRVLNEF--CDFGFEPNAITYTTVMKCCFRCGRLEQGLEILS 242
Query: 392 EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
EM+ + + AY ++ L K E + + ++ + G+ P + SY + N++ G
Sbjct: 243 EMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQG 302
Query: 452 MHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
D L + +EK + ++ + I + L GN E AE+ ++M++ G N +
Sbjct: 303 RFDE-ALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLDYMNT-LGFGFNLVA 360
Query: 510 CNIILSAYLSSGDFVKAEKIYDLMCLK 536
N IL +GD KA K++D M +K
Sbjct: 361 FNSILDCLGKAGDIDKAVKVFDSMEVK 387
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 143/338 (42%), Gaps = 26/338 (7%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
++FD++ + +P+ +T++ +I ++ G L+ + ++M+ G +P +N L
Sbjct: 36 EVFDEMTERAVLPNHITYNTMIDGHIKG---GDLEAGFRLRDQMV-CHGLKPNAITYNVL 91
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID-KERISLL 319
L + G + + E ++ G YS I N D K +SL
Sbjct: 92 LSGLC-RAGRMGETSALLDEMASQKMVPDGF-----TYS--ILFDGLSRNGDSKAMLSLF 143
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAY 377
K ++ G G +L K+G V AE+ L+ + G+ +Y + Y
Sbjct: 144 GKYLKN-GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA--GLVPTRVIYNTLINGY 200
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
+ GE + F +M+ R Y+ +I LCKAE + L+ E + G+ P +
Sbjct: 201 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 260
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
++ L + Y G ++ + SE E +PN YG + + G I +A I +
Sbjct: 261 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 320
Query: 497 M-HSDQTIGVNTRSCNIILSAYLSSGD----FVKAEKI 529
M H D + N + N I+ AY+ G F+ EK+
Sbjct: 321 MFHKD--VLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 356
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 148/356 (41%), Gaps = 20/356 (5%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + + K+ K + ++ ++N G VP+ + ++ LI Y G L+ A S + +M
Sbjct: 161 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT---GELEGAFSTFGQM- 216
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ +P +N+L L + A+ + + +G+ + ++ LI +
Sbjct: 217 KSRHIKPDHITYNALINGLCKAE------RITNAQDLLMEMQDNGVNPTVETFNTLIDAY 270
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
++K I L EMQ+ G + S++ K G + +A + D +
Sbjct: 271 GRTGQLEKCFIVL--SEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD--V 326
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
A VY ++AY + G ++ + +M+ S S+ Y+ +I+ LC + E
Sbjct: 327 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 386
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI--YGIYLESL 481
++ + P SY L + G D+ L + + K T+ Y + L
Sbjct: 387 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKA-LDLQQRMHKYGIKSTVRTYHQLISGL 445
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
AG + + E ++ M + + N NI++ AY G+ +KAE + M K+
Sbjct: 446 GGAGRLNEMEYLYQKMMQNNVVPSNAIH-NIMVEAYSKYGNEIKAEDLRKEMLQKR 500
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 89/436 (20%), Positives = 170/436 (38%), Gaps = 68/436 (15%)
Query: 157 IRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEM 216
+++ + GF + + M++ FA L + K R+ R +FD++I + VP+ +
Sbjct: 170 LKDLDKGFELMKSMVKDGMGPSVFAYNLVLGG-LCKVRRIKDARKLFDEMIQRNMVPNTV 228
Query: 217 TFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK--------- 267
T++ LI Y G ++EA RM + + +NSL L
Sbjct: 229 TYNTLIDGYCKV---GGIEEALGFKERMKE-QNVECNLVTYNSLLNGLCGSGRVDDAREV 284
Query: 268 ----------PGGLSKYY--------------------------------------LQQA 279
PGG + +++A
Sbjct: 285 LLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKA 344
Query: 280 EFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVL 339
E + L+ +G+ K Y+ I +++Y D ++ L ++M++ G E + +V+
Sbjct: 345 EEVLAKLVENGVTPSKISYN--ILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVI 402
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPT-PAFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
+ G+V+ AE TW+R + PT + + Y + G F++ E EM +
Sbjct: 403 SKFCETGEVDHAE-TWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGI 461
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
+V +Y +I LCK + E ++ + + G+ P Y L +L
Sbjct: 462 KPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFR 521
Query: 459 AFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
F E ++ Y + L G ++KAE++F M + + + + N ++S Y
Sbjct: 522 FFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQM-AGKGCNPDVITYNSLISGY 580
Query: 518 LSSGDFVKAEKIYDLM 533
S + K ++YD M
Sbjct: 581 AKSVNTQKCLELYDKM 596
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 120/280 (42%), Gaps = 19/280 (6%)
Query: 165 RVYEWM--MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
R +E++ M + + + L + + K+RK + D+I +G P+ +++LI
Sbjct: 448 RCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLI 507
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
A S L +A ++ MIQ G +N+L L + G + K AE +
Sbjct: 508 EASCSLSK---LKDAFRFFDEMIQ-SGIDATLVTYNTLINGL-GRNGRVKK-----AEDL 557
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
F + G Y+ LI Y +++ ++ L +M+ G + ++ C
Sbjct: 558 FLQMAGKGCNPDVITYNSLI--SGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYAC 615
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSA 400
KEG V +K + +L+ D + FVY + +YA+ G MK++ + ++M ++
Sbjct: 616 RKEG-VVTMDKMFQEMLQMD--LVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDC 672
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
Y+ +I + + L+ + G+ P + +Y
Sbjct: 673 DKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTY 712
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 84/210 (40%), Gaps = 6/210 (2%)
Query: 293 IQKDIYS-GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
+ K +S L+WL S +D+ + L M++ GF + +LR E
Sbjct: 84 VSKPFFSDNLLWLCSVSKMLDEA--TDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKT 141
Query: 352 EKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
+ +++S A+ ++A + + K E+ + M + SV AY+ ++
Sbjct: 142 LAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGG 201
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL--EKCRP 469
LCK + L E ++ M P +Y L + Y +G + L F E + +
Sbjct: 202 LCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEE-ALGFKERMKEQNVEC 260
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
N Y L L +G ++ A E+ M
Sbjct: 261 NLVTYNSLLNGLCGSGRVDDAREVLLEMEG 290
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 155/402 (38%), Gaps = 48/402 (11%)
Query: 129 GTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLAD 188
G++ R L+ K L D + + + + R++++M +Q W + + + T +
Sbjct: 97 GSIARCLDIFKNRLSLNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIIS 156
Query: 189 YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG 248
+G+E KC +IFD++ +QG + S ++ LI AY + G
Sbjct: 157 LLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYG-------------------RNG 197
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
Y+ L + R VS N+LT I L W
Sbjct: 198 QYETSLELLERMKRERVSP-----------------NILTYNTVINACARGDLDW----- 235
Query: 309 DNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
E + L EM+ G + ++L CA G ++AE + ++E
Sbjct: 236 -----EGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEIT 290
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
+ Y +E + K+G+ K + +EM+ + +Y+ +IE K + + K+
Sbjct: 291 TYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQM 350
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNI 487
G P +Y L N+Y G +D + F + E P+ T Y I + G
Sbjct: 351 QAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYF 410
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
++ +F H D+ I N + ++ A G A+KI
Sbjct: 411 KEVVTLF-HDLVDENIDPNMETYEGLVFACGKGGLHEDAKKI 451
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 150/349 (42%), Gaps = 16/349 (4%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ ++G P +T++ L+ A +G DEA ++ MI+ GG P + ++
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSA---CAARGLGDEAEMVFKTMIE-GGIVPEITTYS--- 293
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
+V G L K L++ + + + G Y+ LI H+ +I KE + + K
Sbjct: 294 -YIVETFGKLGK--LEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSI-KEAMDVFK- 348
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
+MQ AG +L + K G +D + +L++ ES + + + + G
Sbjct: 349 QMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGG 408
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
F + + +F ++ + ++ Y ++ K E + ++ G+ P +Y
Sbjct: 409 YFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYS 468
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI--YGIYLESLKNAGNIEKAEEIFNHMHS 499
L Y ++D +AF+ + + TI Y + + G ++ E I + M
Sbjct: 469 GLIEAYGQAALYDEALVAFN-TMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMR- 526
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL 548
+ I N +S + I+ Y SG + +A K + M + E++ +E +
Sbjct: 527 EYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGV 575
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 75/385 (19%), Positives = 152/385 (39%), Gaps = 54/385 (14%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ Y D + L + K + D+F + G VP+ T+ IL+ Y
Sbjct: 315 MESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLY---GK 371
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G D+ ++ +M + +P + +N L R V GG Y ++ +FH+L+
Sbjct: 372 HGRYDDVRELFLQMKE-SSAEPDATTYNILIR--VFGEGG----YFKEVVTLFHDLVDEN 424
Query: 291 LEIQKDIYSGLIW------LH--------------------SYQDNIDKERISLLKKE-- 322
++ + Y GL++ LH +Y I+ + L E
Sbjct: 425 IDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEAL 484
Query: 323 -----MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
M + G + + S++ A+ G ++ E R+ E +F +E Y
Sbjct: 485 VAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGY 544
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
+ G++ ++++ F EM++ ++ + C A + ++ E +G+ P +
Sbjct: 545 RQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSV 604
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNR--TIYGIYLESLK----NAGNIEKAE 491
Y + +Y G D SE L++ R +I+ + + +K + N + E
Sbjct: 605 LCYCMMLAVYAKNGRWDDA----SELLDEMIKTRVSSIHQVIGQMIKGDYDDDSNWQMVE 660
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSA 516
+F+ +++ + G R N +L A
Sbjct: 661 YVFDKLNA-EGCGFGMRFYNTLLEA 684
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 155/402 (38%), Gaps = 48/402 (11%)
Query: 129 GTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLAD 188
G++ R L+ K L D + + + + R++++M +Q W + + + T +
Sbjct: 97 GSIARCLDIFKNRLSLNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIIS 156
Query: 189 YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG 248
+G+E KC +IFD++ +QG + S ++ LI AY + G
Sbjct: 157 LLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYG-------------------RNG 197
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
Y+ L + R VS N+LT I L W
Sbjct: 198 QYETSLELLERMKRERVSP-----------------NILTYNTVINACARGDLDW----- 235
Query: 309 DNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
E + L EM+ G + ++L CA G ++AE + ++E
Sbjct: 236 -----EGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEIT 290
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
+ Y +E + K+G+ K + +EM+ + +Y+ +IE K + + K+
Sbjct: 291 TYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQM 350
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNI 487
G P +Y L N+Y G +D + F + E P+ T Y I + G
Sbjct: 351 QAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYF 410
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
++ +F H D+ I N + ++ A G A+KI
Sbjct: 411 KEVVTLF-HDLVDENIDPNMETYEGLVFACGKGGLHEDAKKI 451
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 150/349 (42%), Gaps = 16/349 (4%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ ++G P +T++ L+ A +G DEA ++ MI+ GG P + ++
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSA---CAARGLGDEAEMVFKTMIE-GGIVPEITTYS--- 293
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
+V G L K L++ + + + G Y+ LI H+ +I KE + + K
Sbjct: 294 -YIVETFGKLGK--LEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSI-KEAMDVFK- 348
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
+MQ AG +L + K G +D + +L++ ES + + + + G
Sbjct: 349 QMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGG 408
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
F + + +F ++ + ++ Y ++ K E + ++ G+ P +Y
Sbjct: 409 YFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYS 468
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI--YGIYLESLKNAGNIEKAEEIFNHMHS 499
L Y ++D +AF+ + + TI Y + + G ++ E I + M
Sbjct: 469 GLIEAYGQAALYDEALVAFN-TMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMR- 526
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL 548
+ I N +S + I+ Y SG + +A K + M + E++ +E +
Sbjct: 527 EYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGV 575
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 75/385 (19%), Positives = 152/385 (39%), Gaps = 54/385 (14%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ Y D + L + K + D+F + G VP+ T+ IL+ Y
Sbjct: 315 MESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLY---GK 371
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G D+ ++ +M + +P + +N L R V GG Y ++ +FH+L+
Sbjct: 372 HGRYDDVRELFLQMKE-SSAEPDATTYNILIR--VFGEGG----YFKEVVTLFHDLVDEN 424
Query: 291 LEIQKDIYSGLIW------LH--------------------SYQDNIDKERISLLKKE-- 322
++ + Y GL++ LH +Y I+ + L E
Sbjct: 425 IDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEAL 484
Query: 323 -----MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
M + G + + S++ A+ G ++ E R+ E +F +E Y
Sbjct: 485 VAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGY 544
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
+ G++ ++++ F EM++ ++ + C A + ++ E +G+ P +
Sbjct: 545 RQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSV 604
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNR--TIYGIYLESLK----NAGNIEKAE 491
Y + +Y G D SE L++ R +I+ + + +K + N + E
Sbjct: 605 LCYCMMLAVYAKNGRWDDA----SELLDEMIKTRVSSIHQVIGQMIKGDYDDDSNWQMVE 660
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSA 516
+F+ +++ + G R N +L A
Sbjct: 661 YVFDKLNA-EGCGFGMRFYNTLLEA 684
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 141/326 (43%), Gaps = 12/326 (3%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN-SL 260
+FD+++ R S F+ L+ A + A S++NRM + + RP L S+
Sbjct: 36 LFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSI 95
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
+ G + + F +L +G + + + + L+ +D E + +L
Sbjct: 96 LTGCFCRLGRIEHGFAA-----FGLILKTGWRVNEVVINQLLNGLCDAKRVD-EAMDILL 149
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK---MEAY 377
+ M + G ++L+ E VE+A + + E G TP V ++
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
K ++ + + M ++ V Y II+ LCKA+ + E +++ ++ G+KP +
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+Y + + DR ++K +P+ Y ++ L A +++A+ + H
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGD 522
M D+ + + ++ N ++ YLS+G+
Sbjct: 330 M-IDKDVKPDIQTYNCLIHGYLSTGE 354
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 144/363 (39%), Gaps = 22/363 (6%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D + L DY+ K K + R IF +I +G P+ + IL+ Y + +G + +
Sbjct: 373 DVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAA---RGAIADLT 429
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
+ + M+ G P + N + A K + +A IF + GL Y
Sbjct: 430 DLLDLMVA-NGISPNNYIFNIVLCAYAKKA------MIDEAMHIFSRMSQHGLSPDVVTY 482
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
LI +D + +M G V S++ E AE+ + +
Sbjct: 483 GILIDALCKLGRVDDAVLKF--NQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEM 540
Query: 359 LESDNGI-PTPAFVYK-MEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELLCKA 415
D G+ P F M G+ M + + M ER+G +V +Y+ +I C A
Sbjct: 541 W--DQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSM-ERVGVRPNVISYNTLIGGHCLA 597
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIY 474
T+ L+ V G+KP + SY L Y G D + F E L K P Y
Sbjct: 598 GRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTY 657
Query: 475 GIYLESLKNAGNIEKAEEIF-NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
L+ L + +A+E++ N + S Q + T NIIL+ + +A KI+ +
Sbjct: 658 STILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTY--NIILNGLCKTNCVDEAFKIFQSL 715
Query: 534 CLK 536
C K
Sbjct: 716 CSK 718
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 127/310 (40%), Gaps = 25/310 (8%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
+DEA I R + G P N+L + L ++ +++A + H + G
Sbjct: 141 VDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEK------RVEEALELLHTMAEDG--- 191
Query: 294 QKDIYSGLIWLHSYQDNIDK----ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
+ ++ ++ D + K +R + + M G + +++ K V+
Sbjct: 192 GGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVD 251
Query: 350 DAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
AE ++ D G+ Y ++ K ++ + + M ++ V Y+
Sbjct: 252 RAEGVLQHMI--DKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNT 309
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG----MHDRLHLAFSEC 463
II+ LCKA+ + + +++ ++ +KP + +Y L + YL+ G + RL ++
Sbjct: 310 IIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARG 369
Query: 464 LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
L+ P+ Y + L+ L G +A +IF M + I N I+L Y + G
Sbjct: 370 LD---PDVVTYSLLLDYLCKNGKCTEARKIFYCMIR-KGIKPNVTIYGILLHGYAARGAI 425
Query: 524 VKAEKIYDLM 533
+ DLM
Sbjct: 426 ADLTDLLDLM 435
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 144/355 (40%), Gaps = 33/355 (9%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F D+ + G +P+ T + L++ G + A ++ M Q G + P + HN L
Sbjct: 47 VFSDMKSSGLLPNASTMNTLLLGLCEI---GQMSSALKLFREM-QAGPFLPTSASHNILL 102
Query: 262 RALVSKPGGLSKYYLQQAEFI------FHNLLT---------------SGLEIQKDIYSG 300
R + + +A + +H LL+ S + DI +
Sbjct: 103 RGFFMAGRAIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTY 162
Query: 301 LIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
+ + Y L KE+ +AG+E ++ K VE+A + +++++E
Sbjct: 163 NVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 222
Query: 361 SDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
S N +P F + + K G ++++F EM++ A++ Y+ +I+ LCK
Sbjct: 223 S-NCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGV 281
Query: 420 LTE-SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYL 478
T L + G+ P + +Y +L + +D L L E C+P+ Y +
Sbjct: 282 YTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERA-NDGLRLLCHMHAEGCKPDVITYNCLI 340
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
L +A +E A+ +FN M N + N ++ + +A I D M
Sbjct: 341 SGLCSANRVEDAQRLFNGM----ACAPNVTTFNFLIRGLCAQKKVEEARNILDRM 391
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 98/235 (41%), Gaps = 20/235 (8%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
++F +I VP+ +TF+ LI + A G L++A ++ M ++G + +N+L
Sbjct: 215 EVFMKMIESNCVPNAVTFNTLIAGFCKA---GMLEDAIKLFAEMEKIG-CKATIVTYNTL 270
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
+L K GG+ A +F+ L +GL Y+ LI S + N D R L
Sbjct: 271 IDSLCKKRGGV-----YTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERAN-DGLR---LL 321
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
M G + ++ VEDA++ + NG+ V +
Sbjct: 322 CHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLF-------NGMACAPNVTTFNFLIRG 374
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
K +E R + +R+ + + ++ II CKA +MK+ ++ G P
Sbjct: 375 LCAQKKVEEARNILDRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYP 429
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 153/382 (40%), Gaps = 47/382 (12%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV-------------QGCLDEAC 238
KE + K +F +++ QG P+ +T++ +I A +G L+EA
Sbjct: 151 KEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAV 210
Query: 239 SIYNRMIQLGGYQP----------------RPSLHNSLFRALVSK---PGG------LSK 273
+ +M GG QP R + ++F ++V + P L
Sbjct: 211 RLLKKM-SGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHG 269
Query: 274 YYLQQAEFIFHNLLT----SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
Y + A H+LL G+ ++ +++ LI ++ + +DK + + EM+Q GF
Sbjct: 270 YATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFI--EMRQKGFS 327
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEI 389
+V+ + K G VEDA + +++ F + IGE+ K ++
Sbjct: 328 PNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKL 387
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY-L 448
EM R + + I++ LCK + + G+KP + SY L + Y L
Sbjct: 388 SFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCL 447
Query: 449 NLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTR 508
+ M + + L RP+ Y L G ++ A ++ M S + + N
Sbjct: 448 DGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFS-KDVKPNAI 506
Query: 509 SCNIILSAYLSSGDFVKAEKIY 530
+ NIIL +G V A + Y
Sbjct: 507 TYNIILHGLFHAGRVVAAREFY 528
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 158/400 (39%), Gaps = 30/400 (7%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+Q + + T + D + K + F ++++G P +TF LI +
Sbjct: 321 MRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGE 380
Query: 231 QGCLDE-ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
+++ + + NR G P N++ +L + L +A F ++
Sbjct: 381 WKKVEKLSFEMINR-----GIHPNAIFLNTIMDSLCKEGRVL------EAHDFFDQIIHV 429
Query: 290 GLEIQKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
G ++ D+ S I + Y D E I LL + M G ++L K G V
Sbjct: 430 G--VKPDVVSYTILIDGYCLDGKMDESIKLLGR-MVSIGLRPDNVTYSALLNGYCKNGRV 486
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYA--KIGEFMKSLEIFREMQERLGSASVPAYH 406
+DA + + D + A Y + + G + + E + ++ + + Y+
Sbjct: 487 DDALALYREMFSKD--VKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYN 544
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSEC 463
++ LC E + ++ F K M + L R+ A FS
Sbjct: 545 IVLGGLC---ENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAI 601
Query: 464 LEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
L P+ IYG+ ++S G +E+++E+F M + N+R+ N I+ L GD
Sbjct: 602 LPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTA-NSRTLNAIVRKLLEKGD 660
Query: 523 FVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNR--KEVK 560
+A + K+Y +E++ L ++S + KEVK
Sbjct: 661 VRRAGTYLTKIDEKEYSVEASTAVLLISIVSERKYQKEVK 700
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 146/335 (43%), Gaps = 22/335 (6%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+FD++ + VP+ +T++ +I ++ +G L+ ++++M++ G +P +N L
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIK---KGDLESGFRLWSQMLR-HGLKPNVITYNVLL 265
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L + G + + E ++ G YS L HS D + + L +
Sbjct: 266 SGLC-RAGRMGETAAVLDEMASRKMVPDGFT-----YSILFDGHSRTG--DSQTMLSLFE 317
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAK 379
E + G + G +L K+G + AE+ L+ S G+ +Y + Y +
Sbjct: 318 ESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNS--GLLQTTVIYNTLINGYCQ 375
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
IG+ + IF++M+ RL Y+ +I L K E L+ E + G+ P + +
Sbjct: 376 IGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVET 435
Query: 440 YINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
+ L + Y G ++ + S+ EK +PN YG + + G I +A I + M
Sbjct: 436 FNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMF 495
Query: 499 SDQTIGVNTRSCNIILSAYLSSGD----FVKAEKI 529
+ + N I+ AY+ G F+ AEK+
Sbjct: 496 IKDVL-PGAQVYNAIIDAYIECGSTDQAFMLAEKM 529
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 152/348 (43%), Gaps = 20/348 (5%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + + K+ K +K ++ ++N G + + + ++ LI Y G L+ A SI+
Sbjct: 334 LLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQI---GDLEGAFSIFQ--- 387
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
Q+ RP + + AL++ G + + + +A + + +G+ + ++ LI +
Sbjct: 388 QMKSRLIRPD--HITYNALINGLGKVER--ITEAHDLVIEMEKNGVNPSVETFNTLIDAY 443
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
++K I L +MQ+ G + S++ K G + +A + D +
Sbjct: 444 GRAGQLEKCFIIL--SDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKD--V 499
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
A VY ++AY + G ++ + +M+ S+ Y+ +I+ LCK + E
Sbjct: 500 LPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEE 559
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLESL 481
L+ G+ P + SY L + DR L + + KC +P+ Y + SL
Sbjct: 560 LLDSLRNYGLAPDVISYNTLISACCYRSNTDR-ALELEKEMWKCGIKPSPRTYRMLFSSL 618
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
AG + + E ++ M D+ + + NI++ AY G+ K E +
Sbjct: 619 GGAGRVHEMENLYQQML-DKDVVPCSGIYNIMVDAYAKCGEESKVEAL 665
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 143/363 (39%), Gaps = 57/363 (15%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
T + +C +I + E F +++ M+ R D L + +GK + + D+ ++
Sbjct: 368 TLINGYC-QIGDLEGAFSIFQ-QMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEME 425
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
G PS TF+ LI AY A G L E C I +Q G +P + S+ A K
Sbjct: 426 KNGVNPSVETFNTLIDAYGRA---GQL-EKCFIILSDMQEKGLKPNVVSYGSIVNAFC-K 480
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
G + +A I ++ + +Y+ +I +Y + ++ +L ++M+ +G
Sbjct: 481 NG-----KILEAVAILDDMFIKDVLPGAQVYNAII--DAYIECGSTDQAFMLAEKMKSSG 533
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSL 387
+++ K+ + +AE E + SL
Sbjct: 534 VPPSIVTYNLLIKGLCKQSQISEAE-----------------------------ELLDSL 564
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
+ + V +Y+ +I C T+ L KE + G+KP +Y L +
Sbjct: 565 RNYGLAPD------VISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRML---F 615
Query: 448 LNLGMHDRLHLA---FSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
+LG R+H + + L+K P IY I +++ G K E + M SD+ I
Sbjct: 616 SSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEM-SDKGI 674
Query: 504 GVN 506
V
Sbjct: 675 AVG 677
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 155/372 (41%), Gaps = 22/372 (5%)
Query: 132 VRILNAQKKW-LRQEDGTYLAV---HCMRIRENETGFRVYEWMMQQHWYRFDFALATKLA 187
R L KKW LR TY + H +R RE GF VYE M + Y+ D L
Sbjct: 171 ARCLELAKKWGLRLNGYTYKCIVQAH-LRSREVSKGFEVYEEM-HRKGYKLDIFAYNMLL 228
Query: 188 DYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL 247
D + K + +F+D+ + VP T+ ILI + G + S ++ M+
Sbjct: 229 DALAKAGMVDQAYQVFEDMKQKYCVPDAYTYTILIRM---SGKTGQTYKFLSFFDEMVSR 285
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
G + +N++ AL G +K + + F+ ++ S + + YS + + +
Sbjct: 286 GCALNLIA-YNTVIEAL-----GKNKM-VDKVIFVLSKMIESDCQPNQFTYSLTLDILAT 338
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+ + + L + + K + +++ K G +A + R+ S
Sbjct: 339 EGQLHR-----LNEVLDICDRYLNKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDR 393
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
AF+ +E G+ ++++++ M E+ + Y+ + L K ++ +L +
Sbjct: 394 DAFISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDK 453
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGN 486
+G+ P + +Y + + Y +G+ D+ F E C+P+ Y + L G+
Sbjct: 454 MKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGD 513
Query: 487 IEKAEEIFNHMH 498
+++A +F M
Sbjct: 514 LDEAHILFKEMQ 525
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 363 NGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
+GI F Y + +Y ++G K+ +F EM+ V Y+ +I L K + +
Sbjct: 457 SGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDE 516
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECL-EKCRPNRTIYGI 476
L KE E G P + +Y L + G +++ +A F E + E C PN Y I
Sbjct: 517 AHILFKEMQEKGYDPDVFTYSTLIECF---GKSNKVDMACSLFDEMIAEGCIPNIVTYNI 573
Query: 477 YLESLKNAGNIEKAEEIFNHM 497
L+ L+ G +A + + M
Sbjct: 574 LLDCLERRGKTAEAHKHYETM 594
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 167/395 (42%), Gaps = 36/395 (9%)
Query: 109 EQWRRAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETG--FRV 166
+ W+RA + C L H R++ L + + LAV E+ G +V
Sbjct: 193 QNWQRALELYECLNL-RHWYAPNARMVATILGVLGKANQEALAVEIFARAESSVGDTVQV 251
Query: 167 YEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYL 226
Y MM + + +F+K +++ D + +G VP ++F+ LI A +
Sbjct: 252 YNAMMGVY----------------ARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARM 295
Query: 227 SAPVQGCLDE--ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
+ G ++ A + N ++ G +P +N+L A + L++A +F
Sbjct: 296 KS---GAMEPNLALQLLNE-VRRSGIRPDIITYNTLISACSRESN------LEEAVAVFS 345
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
++ + Q D+++ + Y + L KE++ GF S+L ++
Sbjct: 346 DMESH--RCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSR 403
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
EG+ E +++ G + + Y K G ++++I+R+M+ +
Sbjct: 404 EGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVT 463
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
Y +I+ L KA + E ++M E ++ G+KP + +Y L Y G + F+ C+
Sbjct: 464 YTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFN-CM 522
Query: 465 EKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ +P+R Y + L+ ++KA +++ M
Sbjct: 523 RRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEM 557
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 140/357 (39%), Gaps = 51/357 (14%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D ++ + + GK + + K + + + ++ LI AY GC + A
Sbjct: 773 DISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAY---AFSGCYERAR 829
Query: 239 SIYNRMIQLGGYQPRPSLH--NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
+I+N M++ G P P++ N L +AL+ L + + L GL+I K
Sbjct: 830 AIFNTMMRDG---PSPTVDSVNGLLQALIVD------RRLNELYVVIQELQDMGLKISKS 880
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
S L+ L ++ + + + M+ AG+ V +LR+ K V D E
Sbjct: 881 --SILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLC 938
Query: 357 RLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
+ E+ ++ Y I +F I++++Q+ Y+ +I + C+
Sbjct: 939 EMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDR 998
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGI 476
E SLM + G++P + +Y +L + M+
Sbjct: 999 RPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMY----------------------- 1035
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
E+AEE+F + S+ ++ ++++ Y +SGD KAE + +M
Sbjct: 1036 -----------EQAEELFEELRSN-GYKLDRAFYHLMMKTYRTSGDHRKAENLLAIM 1080
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 4/182 (2%)
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCK--AEE 417
ES G + M YA+ G F K E+ M+ER + +++ +I K A E
Sbjct: 242 ESSVGDTVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAME 301
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGI 476
L L+ E +G++P + +Y L + + FS+ +C+P+ Y
Sbjct: 302 PNLALQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNA 361
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
+ KAEE+F + S + + + N +L A+ G+ K I + M +
Sbjct: 362 MISVYGRCARARKAEELFKELES-KGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKR 420
Query: 537 KY 538
+
Sbjct: 421 GF 422
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 113/274 (41%), Gaps = 27/274 (9%)
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
G+QP + NS+ + + G+ + + I+ + + L+ ++ Y+ LI ++
Sbjct: 943 AGFQPDLQICNSILKLYL----GIEDF--KSMGIIYQKIQDASLKPDEETYNTLIIMYC- 995
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+D +E SL+ K M+ G E + S++ K+ E AE+ + L + +
Sbjct: 996 RDRRPEEGFSLMNK-MRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDR 1054
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
+ M+ Y G+ K+ + M+E ++ H ++ K+ + E E+++K
Sbjct: 1055 AFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKN 1114
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNI 487
TG+ Y ++ + YL G F +EK L +K AG I
Sbjct: 1115 LRTTGVVLDTLPYSSVIDAYLKKG-------DFKAGIEK-----------LTEMKEAG-I 1155
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
E I+ T+ T ++L+A +G
Sbjct: 1156 EPDHRIWTCFIRAATLSEGTNEAIVLLNALQDAG 1189
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 171/421 (40%), Gaps = 28/421 (6%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ D + L DY+ K + + R IFD + +G P T+ L+ Y +
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT--- 348
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G L E + + M++ G P + +F L+ K + QA +F + G
Sbjct: 349 KGALVEMHGLLDLMVR-NGIHP----DHYVFSILICAYAKQGK--VDQAMLVFSKMRQQG 401
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
L Y +I + + E L ++M G G V S++ E
Sbjct: 402 LNPNAVTYGAVIGILCKSGRV--EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 459
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKII 409
AE+ L +L+ + T F ++++ K G ++S ++F E+ R+G +V Y+ +I
Sbjct: 460 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF-ELMVRIGVKPNVITYNTLI 518
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCR 468
C A + + L+ V G+KP +Y L N Y + M D L L
Sbjct: 519 NGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVS 578
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
P+ Y I L+ L A+E++ + T + + NIIL + A +
Sbjct: 579 PDIITYNIILQGLFQTRRTAAAKELYVRITESGT-QIELSTYNIILHGLCKNKLTDDALQ 637
Query: 529 IYDLMCLKKYEIES-AWMEKLDYVLSLNRKEVKKPVSLNLSSE-----------QRENLI 576
++ +CL ++E+ + +D +L + R + K + + SS EN+I
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII 697
Query: 577 G 577
G
Sbjct: 698 G 698
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 141/344 (40%), Gaps = 26/344 (7%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN- 258
R +FD+++ +GR S + L+ + A S YNRM + G + P L
Sbjct: 35 RHVFDELLRRGRGASIYGLN----RALADVARDSPAAAVSRYNRMARAGADEVTPDLCTY 90
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
+ + G L + N++ G + ++ L+ D + + +
Sbjct: 91 GILIGCCCRAGRLDLGFAA-----LGNVIKKGFRVDAIAFTPLLK-GLCADKRTSDAMDI 144
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP----AFVYKM 374
+ + M + G +L+ E ++A + L ++ D G +P ++ +
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALE-LLHMMADDRGGGSPPDVVSYTTVI 203
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
+ K G+ K+ + EM +R V Y+ II LCKA+ + ++ V+ G+
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM 263
Query: 435 PLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-----PNRTIYGIYLESLKNAGNIEK 489
P +Y ++ + Y + G + + F L+K R P+ Y + ++ L G +
Sbjct: 264 PDCMTYNSILHGYCSSG-QPKEAIGF---LKKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A +IF+ M + + + + +L Y + G V+ + DLM
Sbjct: 320 ARKIFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 362
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 135/320 (42%), Gaps = 13/320 (4%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D L G+ ++ IF ++ G V TF+ LI AY G D+A
Sbjct: 438 DIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRC---GSFDQAM 494
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
++Y M++ G P S +N++ AL GGL +Q+E + + + + Y
Sbjct: 495 AVYKSMLE-AGVVPDLSTYNAVLAALAR--GGL----WEQSEKVLAEMEDGRCKPNELSY 547
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
S L LH+Y + + ER++ +E+ E +L +++ V +K + + E+ +L L
Sbjct: 548 SSL--LHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLEL 605
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
+ Y + K+ EI M E + S+ Y+ ++ + ++E
Sbjct: 606 RRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENF 665
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIY 477
+ +E +++E +E GMKP SY + Y G FSE + P+ Y +
Sbjct: 666 QKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTF 725
Query: 478 LESLKNAGNIEKAEEIFNHM 497
+ + +A ++ +M
Sbjct: 726 IATYAADSMFAEAIDVVRYM 745
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 6/218 (2%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEA 376
L ++M+ GF K ++L V K ++A K L+ +E+ NG + Y + A
Sbjct: 286 LFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKV-LQEMEA-NGFSPTSVTYNSLISA 343
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
YAK G ++L++ +M + V Y ++ KA + + + E G KP
Sbjct: 344 YAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPN 403
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
+ ++ L M+ N G + F + L C P+ + L G + IF
Sbjct: 404 ICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFK 463
Query: 496 HMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M + + N ++SAY G F +A +Y M
Sbjct: 464 EMKRAGFVA-ERDTFNTLISAYSRCGSFDQAMAVYKSM 500
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 125/330 (37%), Gaps = 52/330 (15%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ + D L D GK R+ + + ++ G P+ +T++ LI AY
Sbjct: 290 MKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKG-- 347
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G L+EA + +M+ G +P + +L + G + +Q +F + G
Sbjct: 348 -GLLEEALDLKTQMVH-KGIKPDVFTYTTLLSGF--EKAGKDDFAIQ----VFLEMRAVG 399
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ ++ LI +H + F E +V + ++C D+
Sbjct: 400 CKPNICTFNALIKMHG-----------------NRGKFAEMMKVFDDI-KLCNCSPDI-- 439
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
TW LL + + G + IF+EM+ A ++ +I
Sbjct: 440 --VTWNTLLA---------------VFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLIS 482
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRP 469
+ + ++ K +E G+ P + +Y + G+ ++ +E + +C+P
Sbjct: 483 AYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKP 542
Query: 470 NRTIYGIYLESLKNAGNIEK----AEEIFN 495
N Y L + N IE+ AEEI++
Sbjct: 543 NELSYSSLLHAYANGKEIERMNAFAEEIYS 572
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 175/431 (40%), Gaps = 49/431 (11%)
Query: 157 IRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEM 216
+R+ + W+ Q ++ D L D + + R + +F+ ++ QG VP+
Sbjct: 107 LRDGGEALTFFRWL-QARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGF 165
Query: 217 TFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL--VSKPGGLSKY 274
T+ +L+ S+ + DEA + M+ G++P +L+ + L K G S+
Sbjct: 166 TYAVLV---QSSCYERNSDEAVRFFGEMVD-KGFKPSSTLYQKVTECLKATGKEGEFSRV 221
Query: 275 YLQ---------------------------QAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
+ + +A +F ++ SG + IYS ++ H
Sbjct: 222 FGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCK 281
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+N+D E L + ++ + L K G +E A + + ES +
Sbjct: 282 LENLD-EAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSS-SQ 339
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
P + + + G K+ E E+ R S H +I+ LCKA + SL++
Sbjct: 340 PVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLET 399
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLA--FSECLEK----CRPNRTIYGIYLESL 481
++ G P M ++ L N L D++ A F + +++ + Y L SL
Sbjct: 400 MIKRGYCPDMATHSMLIN---ELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSL 456
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY----DLMCLKK 537
A + +A IF+ M S+++ + S +I++ + + +AEK+Y DL C+
Sbjct: 457 CKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPN 516
Query: 538 YEIESAWMEKL 548
+A++ L
Sbjct: 517 VTTYNAFLNGL 527
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 83/191 (43%), Gaps = 2/191 (1%)
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP 403
++G + DA+ + ++ + + + ++ + ++ E+F M R +
Sbjct: 529 RKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAV 588
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC 463
Y+ ++ LCK + + L ++ VE G P +Y L + N+G ++ F E
Sbjct: 589 TYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEM 648
Query: 464 LEKCR-PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
+ K P+ Y L+ AG +A+++F M S Q +T S NI++ +
Sbjct: 649 VSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC-KPDTVSHNIMIDGLSKAKR 707
Query: 523 FVKAEKIYDLM 533
A ++++ M
Sbjct: 708 LDDAVEVFERM 718
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 130/347 (37%), Gaps = 49/347 (14%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQ-GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM 244
L + + K +K + IF ++++ VP +++ ILI + G A +Y +M
Sbjct: 452 LLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELG---RAEKLYKQM 508
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
I L P + +N+ L + K + A+ ++ ++ +G YS LI
Sbjct: 509 IDLNCV-PNVTTYNAFLNGL------MRKGRIADAQGVYEEMVAAGCSPDVITYSTLI-- 559
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
H + SL +K Q E E ++S R C N
Sbjct: 560 HGF---------SLARKHDQA---HELFETMIS--RGC------------------RPNA 587
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
+ ++ + +K E + E+FR+M ER Y ++ C + E +
Sbjct: 588 VTYNCLLHGLCKESKPDE---AHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEV 644
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKN 483
E V G P + +Y L + G F + + C+P+ + I ++ L
Sbjct: 645 FDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSK 704
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
A ++ A E+F M D + + N ++ +A K++
Sbjct: 705 AKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVF 751
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 143/370 (38%), Gaps = 47/370 (12%)
Query: 129 GTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLAD 188
G++ R L+ K L D + + + + R++++M +Q W + + + T +
Sbjct: 95 GSIARCLDVFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIG 154
Query: 189 YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG 248
+G+E KC++IFD++ + G PS +F LI AY G + + +RM
Sbjct: 155 VLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGR---NGQYKSSLELLDRM---- 207
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
+ E + ++LT I GL W
Sbjct: 208 -----------------------------KKERVSPSILTYNTVINSCARGGLDW----- 233
Query: 309 DNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
E + L +M+ G + ++L CA+ G ++AE + + E
Sbjct: 234 -----EELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDIT 288
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
+ Y +E + K+ K E+ +EM+ + +Y+ ++E ++ + + ++
Sbjct: 289 TYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQM 348
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNI 487
G P +Y L N+Y G +D + F E + PN Y I + G
Sbjct: 349 QGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYF 408
Query: 488 EKAEEIFNHM 497
++ +F+ M
Sbjct: 409 KEVVTLFHDM 418
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 154/357 (43%), Gaps = 16/357 (4%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D + L + GK + K ++ ++ + G P ++++L+ A+ + G + EA
Sbjct: 286 DITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQS---GSIKEAM 342
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
++ R +Q G P + + S+ L + G +Y +F + S E Y
Sbjct: 343 GVF-RQMQGAGCVPNAATY-SILLNLYGRHG---RY--DDVRDLFLEMKVSNTEPNAATY 395
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+ LI + + KE ++L +M + E E ++ C K G EDA+K L +
Sbjct: 396 NILINVFG-EGGYFKEVVTLFH-DMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHM 453
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
E + A+ +EAY + + ++L F M E +V Y+ +I++ K
Sbjct: 454 NEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLY 513
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGI 476
+ +E+++ + ++G+ ++ + + G + A+ E +EK C P+
Sbjct: 514 KESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVE-MEKARCDPDEQTLEA 572
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
L AG +E++EE F + + + C ++L+ Y + + A ++ D M
Sbjct: 573 VLSVYCFAGLVEESEEQFGEIKALGILPSVMCYC-MMLAVYAKADRWDDAHQLLDEM 628
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 125/283 (44%), Gaps = 15/283 (5%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
C + + E GFR+ + +M+ D + L + + KE + + +FD++ +G VP
Sbjct: 293 CCKSGDVEEGFRL-KGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVP 351
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK 273
+ +TF LI G +D A + M+ G RP L + AL++ GL K
Sbjct: 352 NGVTFTTLIDGQCKG---GKVDLALKNFQMMLAQG---VRPDLVT--YNALIN---GLCK 400
Query: 274 YY-LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
L++A + + + SGL+ K ++ LI + D E +K+ M + G E
Sbjct: 401 VGDLKEARRLVNEMTASGLKPDKITFTTLI--DGCCKDGDMESALEIKRRMVEEGIELDD 458
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
+++ +EG V DA + +L + P + ++ + K G+ ++ +E
Sbjct: 459 VAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKE 518
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
MQ V Y+ ++ LCK + + + L+ + G+ P
Sbjct: 519 MQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAP 561
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 149/328 (45%), Gaps = 21/328 (6%)
Query: 211 RVP-SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG 269
R+P S+ +F ++ +Y ++ G D A ++ R+ + G +P ++N L AL+ + G
Sbjct: 103 RIPCSQDSFICVLNSYKNS---GLGDRALKMFYRIKEFG-CKPTVKIYNHLLDALLGESG 158
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
+K+++ A ++ N+ G+E ++++ + L + N + L EM + G
Sbjct: 159 --NKFHMIGA--VYENMRGEGME--PNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCV 212
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEI 389
+V+ ++G VE+A + R A + + ++GE +
Sbjct: 213 PDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVVSVCNALICGLCREGRVGE------V 266
Query: 390 FREMQERLGSASVP---AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNM 446
F M E +G+ P +Y +I L E EL +++ + + G +P + ++ +L
Sbjct: 267 FGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKG 326
Query: 447 YLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV 505
Y G + + + L LE RPN +Y L L +GN+ +A ++ M D
Sbjct: 327 YFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRP 386
Query: 506 NTRSCNIILSAYLSSGDFVKAEKIYDLM 533
N + + ++ ++ +GD A ++++ M
Sbjct: 387 NVTTYSTLVHGFVKAGDLQGASEVWNKM 414
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 156/405 (38%), Gaps = 55/405 (13%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYL---- 226
M H + D + M KE K + +FD +I G P + LI +
Sbjct: 341 MVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKN 400
Query: 227 -----------------------SAPVQG-C----LDEACSIYNRMIQLGGYQPRPSLHN 258
V+G C LD A YN + ++G RP++
Sbjct: 401 VRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGA---YNIVKEMGASGCRPNV-- 455
Query: 259 SLFRALVSKPGGLSKYYLQQAEF-----IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
++ L+ K +LQ++ F + + G+ Y+ LI S +D+
Sbjct: 456 VIYTTLI-------KTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDE 508
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
R LL EM + GF+ + + + G+ A+K +LE IP
Sbjct: 509 ARSFLL--EMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLEC-GVIPNKVLCTG 565
Query: 374 M-EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
+ Y K G+ +++ FR M E+ Y ++ L K + E + E G
Sbjct: 566 LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG 625
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAE 491
+ P + SY L + + LG + F E ++ N IY + L +G IEKA+
Sbjct: 626 IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAK 685
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
E+ + M S + N + I+ Y SGD +A +++D M LK
Sbjct: 686 ELLDEM-SGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLK 729
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 146/345 (42%), Gaps = 30/345 (8%)
Query: 165 RVYEWMMQQHWYRFD-FALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIV 223
R + M ++ ++ D F ++ Y+ + +FA +++ G +P+++ LI
Sbjct: 510 RSFLLEMVENGFKPDAFTYGAFISGYI-EAGEFASADKYVKEMLECGVIPNKVLCTGLIN 568
Query: 224 AYLSAPVQGCLDEACSIYNRMIQ---LGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
Y +G + EACS + M++ LG + L N L + + AE
Sbjct: 569 EYCK---KGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVK----------NGKVNDAE 615
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
IFH + G I D++S + + + ++ S + EM QAG + +L
Sbjct: 616 EIFHEMRGKG--IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLG 673
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY--KMEAYAKIGEFMKSLEIFREMQERLG 398
+ G++E A++ + S G P A Y ++ Y K G+ ++ ++F EM+ +
Sbjct: 674 GFCRSGEIEKAKELLDEM--SGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGL 731
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG----MHD 454
Y +++ C+ + E ++ E E G + L N G D
Sbjct: 732 VPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTD 790
Query: 455 RLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
++ +K +PN Y I ++ L GN+E A+E+F+HM
Sbjct: 791 MINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQ 835
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 136/334 (40%), Gaps = 31/334 (9%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M R + + T L ++ +F + ++ QG P ++ LI+ A
Sbjct: 446 MGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKK 505
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI-----FHN 285
+DEA S M++ G++P + + Y++ EF
Sbjct: 506 ---MDEARSFLLEMVE-NGFKPDAFTYGAFISG-----------YIEAGEFASADKYVKE 550
Query: 286 LLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKE--VLLSVLRVCA 343
+L G+ K + +GLI + + + E S + ++Q + K VL++ L
Sbjct: 551 MLECGVIPNKVLCTGLINEYCKKGKV-IEACSAFRSMVEQGILGDAKTYTVLMNGL---V 606
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSAS 401
K G V DAE+ + + GI F Y ++ ++K+G K+ IF EM + +++
Sbjct: 607 KNGKVNDAEEIFHEM--RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSN 664
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
V Y+ ++ C++ E E + L+ E G P +Y + + Y G F
Sbjct: 665 VIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFD 724
Query: 462 EC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
E L+ P+ +Y ++ ++E+A IF
Sbjct: 725 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 758
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 158/368 (42%), Gaps = 57/368 (15%)
Query: 207 INQGRVPSEMTFHILIVAYLSAPVQG-CLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV 265
+ Q + PS MT +L + ++A ++ LD+A +N M+ G RP++ NSL +LV
Sbjct: 82 LTQNQNPS-MTTALLYESIINAHLKSQLLDKALIFFNEMVD-KGLVFRPNIFNSLLGSLV 139
Query: 266 SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
+ K +L F N L ++ D+YS I + +N + ++ L +Q
Sbjct: 140 -RSNCFEKAWL------FFNELKE--RVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQD 190
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL-----------------------LESD 362
G + +++ C K GD+E A + ++ L+ D
Sbjct: 191 MGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKD 250
Query: 363 ----------NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
NG+ + Y M Y G+ ++ ++F EM+ER A+V Y+ +I
Sbjct: 251 GFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIG 310
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-- 468
+C+ E E L+ + + + P + +Y L + ++G D+ S L++ +
Sbjct: 311 GMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKA----SSLLDQLKSN 366
Query: 469 ---PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
P+ Y I +E AGN + ++ M + I + +C +++ AY+ + K
Sbjct: 367 GLSPSLVTYNILIEGYSKAGNWKGVADLAREMEG-RGISPSKVTCTVLIDAYVRLQEMEK 425
Query: 526 AEKIYDLM 533
A +IY M
Sbjct: 426 AFQIYSSM 433
>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Cucumis sativus]
Length = 481
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 138/304 (45%), Gaps = 18/304 (5%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
++IF+++ QG +P+ +++ L+ + A G L+E+ ++N M+ G QP N
Sbjct: 183 KEIFEEMKAQGMIPNVISYSSLVHGFCCA---GKLEESKRLFNEMVD-QGVQPNLVQFNV 238
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
L L K G + L A +F ++ + G E + Y+ I ++ Y E L
Sbjct: 239 LIDILC-KEGKIGD--LSSARKLFLSMPSKGCEHNEISYT--ILINGYCKIWKVEEAMNL 293
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAK 379
EM Q G + ++L + G V DA K + + S + + +V ++ K
Sbjct: 294 YNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCK 353
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
G +++E+F E++ +Y ++I+ LCKA + E+ K+ + G++P + +
Sbjct: 354 NGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVT 413
Query: 440 YINLTNMYLNLGMHDRLHLAFSECLEK-----CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ + + + D+ ++ F E +EK C P+ Y L + K EE+
Sbjct: 414 CNIMIHGFCRVEQVDKANILF-EKMEKMEENGCTPDIITYNTLLRGFCES---NKLEEVV 469
Query: 495 NHMH 498
N +H
Sbjct: 470 NLLH 473
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 76/172 (44%), Gaps = 9/172 (5%)
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
K+G ++ EIF EM+ + +V +Y ++ C A + E ++ L E V+ G++P +
Sbjct: 174 CKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNL 233
Query: 438 PSYINLTNMYLNLG----MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEI 493
+ L ++ G + L S + C N Y I + +E+A +
Sbjct: 234 VQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNL 293
Query: 494 FNHMHSDQTIG--VNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESA 543
+N M +G N ++ + +L+ L +G A K++ +M ++S
Sbjct: 294 YNEM---PQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSC 342
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 150/330 (45%), Gaps = 22/330 (6%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSL--HNS 259
+FD++++ G VP+ +T++ +I ++ G L+ + ++M+ G P+P++ +N
Sbjct: 216 VFDEMVDMGVVPNWITYNTMIDGHVKG---GDLEAGFRLRDQMLHDG---PKPNIVTYNV 269
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
L L + G + + + E H++ G ++ GL + + +SL
Sbjct: 270 LLSGLC-RAGRMDETRVLMDEMASHSMFPDGFTYSI-LFDGLT-----RTGESRTMLSLF 322
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAY 377
+ +++ G G +L K+G V AE+ L +L +PT +Y + Y
Sbjct: 323 AESLKK-GVMLGAYTCSILLNGLCKDGKVAKAEQV-LEMLVHTGLVPT-TVIYNTLINGY 379
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
++ + + IF +M+ R Y+ +I LCK E E L+ E ++G+ P +
Sbjct: 380 CQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSV 439
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI-YGIYLESLKNAGNIEKAEEIFNH 496
++ L + Y G ++ S+ +K + I +G +++ G I +A I +
Sbjct: 440 ETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDD 499
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
M + + N + N I+ AY+ SGD +A
Sbjct: 500 MIY-KDVAPNAQVYNSIIDAYIESGDTEQA 528
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 141/315 (44%), Gaps = 17/315 (5%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + + K+ K AK + + +++ G VP+ + ++ LI Y L A I+
Sbjct: 340 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRD---LRGAFCIFE--- 393
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
Q+ RP + + AL++ GL K + +AE + + SG++ + ++ LI
Sbjct: 394 QMKSRHIRPD--HITYNALIN---GLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI-- 446
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
+Y E+ + +MQQ G + SV++ K G + +A ++ D
Sbjct: 447 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA 506
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
+ ++AY + G+ ++ + +M+ SAS+ Y+ +++ LC++ + + E L
Sbjct: 507 PNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 566
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLK 482
+ G++P + SY + + N G D+ L + + K RP Y + +L
Sbjct: 567 IYTLRNQGLRPDVVSYNTIISACCNKGDTDK-ALELLQEMNKYGIRPTLRTYHTLVSALA 625
Query: 483 NAGNIEKAEEIFNHM 497
+AG + E ++ M
Sbjct: 626 SAGRVHDMECLYQQM 640
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 132/308 (42%), Gaps = 28/308 (9%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
T + +C ++R+ F ++E M +H R D L + + K K D+ ++
Sbjct: 374 TLINGYC-QVRDLRGAFCIFEQMKSRH-IRPDHITYNALINGLCKLEMVTKAEDLVMEME 431
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
G PS TF+ LI AY +A G L++ ++ + M Q G ++ V
Sbjct: 432 KSGVDPSVETFNTLIDAYGTA---GQLEKCFTVLSDMQQKG------------IKSDVIS 476
Query: 268 PGGLSKYY-----LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKE 322
G + K + + +A I +++ + +Y+ +I +Y ++ D E+ LL ++
Sbjct: 477 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSII--DAYIESGDTEQAFLLVEK 534
Query: 323 MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKI 380
M+ +G +L+ + +++AE+ L + G+ Y + A
Sbjct: 535 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL--RNQGLRPDVVSYNTIISACCNK 592
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G+ K+LE+ +EM + ++ YH ++ L A E L ++ + ++P Y
Sbjct: 593 GDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 652
Query: 441 INLTNMYL 448
+ + Y+
Sbjct: 653 GIMVDAYV 660
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 82/202 (40%), Gaps = 10/202 (4%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA--KIGEFMKSLEIFREMQE 395
V++ C GD++ A R+ S+ P AF Y + + G+ +L++F EM +
Sbjct: 163 VVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVD 222
Query: 396 RLGSASVP---AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
VP Y+ +I+ K + E L + + G KP + +Y L + G
Sbjct: 223 M---GVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGR 279
Query: 453 HDRLHLAFSECLEKCR-PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
D + E P+ Y I + L G +F + + + +C+
Sbjct: 280 MDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAE-SLKKGVMLGAYTCS 338
Query: 512 IILSAYLSSGDFVKAEKIYDLM 533
I+L+ G KAE++ +++
Sbjct: 339 ILLNGLCKDGKVAKAEQVLEML 360
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 145/374 (38%), Gaps = 50/374 (13%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E ++V E MM FA + + + K R+++ ++ G P +++HI
Sbjct: 27 EESYKVLEEMMAAGCNPDVFAFNGVMQGF-ARSNNMEKAREVYQHMVESGYKPDNVSYHI 85
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
LI G LDE+ I + M+ + G P ++SL RAL + A
Sbjct: 86 LIHGLAKI---GKLDESLKILSEMV-MRGQTPSMQAYSSLVRALAKA------RRVDHAS 135
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+F ++ G + ++ LI L
Sbjct: 136 SLFDEMIRGGHHPDRLMFYELI------------------------------------LG 159
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
+C + G V+DA + + ++ + P + + G+ ++ +F EM+ S
Sbjct: 160 LC-QAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSP 218
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
V Y+ +++ +CKA E L + G P + ++ L + G ++ F
Sbjct: 219 DVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVF 278
Query: 461 SECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
LE C+PN+ Y + L A + +A E+F M + I + + N +++ Y
Sbjct: 279 GSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKM-TQACIPPDAVAYNSLIAGYCK 337
Query: 520 SGDFVKAEKIYDLM 533
G +AEK+Y M
Sbjct: 338 RGSMDEAEKLYREM 351
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 6/200 (3%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
S+++ KE E++ K ++ + AF M+ +A+ K+ E+++ M E
Sbjct: 15 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 74
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
+YH +I L K + + + ++ E V G P M +Y +L D
Sbjct: 75 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHA 134
Query: 457 HLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHM--HSDQTIGVNTRSCNII 513
F E + P+R ++ + L AG ++ A E F M H Q N N++
Sbjct: 135 SSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQP---NVPVYNVL 191
Query: 514 LSAYLSSGDFVKAEKIYDLM 533
L SSG +A ++ M
Sbjct: 192 LHGLCSSGQLEQANTLFAEM 211
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 130/298 (43%), Gaps = 20/298 (6%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ + P +T++ L+ A A ++E C ++ M + GY P ++L
Sbjct: 207 LFAEMKSHSCSPDVVTYNTLLDAVCKARR---VEEGCKLFEAM-RAAGYVPNVITFSTLI 262
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L + G L K A +F ++L +G + K Y+ LI + + + R L +
Sbjct: 263 HGLC-RTGELEK-----ALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQAR--ELFE 314
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI-PT-PAFVYKMEAYAK 379
+M QA S++ K G +++AEK + R + G+ PT F ++ + K
Sbjct: 315 KMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLY-REMSGGAGLQPTIVTFNTLIDGFCK 373
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG--MKPLM 437
+G+ ++ E+ EM + +A Y +I L +A + + + K+ E + P+
Sbjct: 374 LGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPV- 432
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
S ++ G D+ + F + PN + I ESL G +E A+++
Sbjct: 433 -SCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 489
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 176/427 (41%), Gaps = 30/427 (7%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
V+ M+ D L DY+ K + + R IFD + +G P T+ L+ Y
Sbjct: 179 VFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGY 238
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHN 285
+ +G L E + + M++ G P ++ +F LV K +++A +F
Sbjct: 239 AT---KGALVEMHGLLDLMVR-NGIHP----NHYVFSILVCAYAKQEK--VEEAMLVFSK 288
Query: 286 LLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKE 345
+ GL Y +I + + E L ++M G G V S++
Sbjct: 289 MRQQGLNPNAVTYGAVIGILCKSGRV--EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 346
Query: 346 GDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVPA 404
E AE+ L +L+ + T F ++++ K G ++S ++F ++ R+G +
Sbjct: 347 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPDIIT 405
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSEC 463
Y +I+ C A + + L+ V GMKP +Y L N Y + M D L L
Sbjct: 406 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREME 465
Query: 464 LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM-HSDQTIGVNTRSCNIILSAYLSSGD 522
P+ Y I L+ L A+E++ + S + + ++T NIIL +
Sbjct: 466 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTY--NIILHGLCKNKL 523
Query: 523 FVKAEKIYDLMCLKKYEIES-AWMEKLDYVLSLNRKEVKKPVSLNLSSE----------- 570
A +++ +CL ++E+ + +D +L + R + K + + SS
Sbjct: 524 TDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 583
Query: 571 QRENLIG 577
EN+IG
Sbjct: 584 MAENIIG 590
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 13/186 (6%)
Query: 356 LRLLESDNGIPTPAFV---YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
L ++ D G P V + + K G+ K+ + EM ++ S +V Y+ II L
Sbjct: 74 LHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAAL 133
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR---- 468
CKA+ + ++ V++G+ P +Y ++ + + + G + + F L+K R
Sbjct: 134 CKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSG-QPKEAIVF---LKKMRSDGV 189
Query: 469 -PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
P+ Y ++ L G +A +IF+ M + + + + +L Y + G V+
Sbjct: 190 EPDVVTYNSLMDYLCKNGRCTEARKIFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMH 248
Query: 528 KIYDLM 533
+ DLM
Sbjct: 249 GLLDLM 254
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/428 (19%), Positives = 182/428 (42%), Gaps = 33/428 (7%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
R +FD++ + P +T+ ILI + + G L+ A + + M+ GG +P +++ S
Sbjct: 279 RQLFDEMAS---APDVVTYGILIHGHCAL---GELENAVKLLDEMVA-GGVEPNATVYTS 331
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
+ L K ++ A + +++ + + + +Y+ ++ + ++ R
Sbjct: 332 VVALLCDKG------WISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWF- 384
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK----TWLRLLESDNGIPTPAFVYKME 375
EMQ+ G +++ + ++E+AEK W R L+ D + ++
Sbjct: 385 -DEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDE----VTYTVLID 439
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
Y K G+ ++ ++ M +R + +V Y + + LCK + + L+ E G++
Sbjct: 440 GYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLEL 499
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIF 494
+Y +L N G ++ ++ C +P+ Y +++L +G++++A +
Sbjct: 500 NACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLL 559
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL--DYVL 552
M D+ I + N++++ + SG +K+ D M K +A L Y +
Sbjct: 560 QEM-LDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCI 618
Query: 553 SLNRKEVKKPVSLNLSSE--QRENLIGLLLGGLCIESDEKRKRH----MIRFQFNENSRM 606
N K + S + EN +L+ G C + K + MI+ F +
Sbjct: 619 ENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATS 678
Query: 607 HSVLRRYL 614
+S L R L
Sbjct: 679 YSALIRLL 686
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
CM R E G ++ +WM++++ + + A L E +I+ + ++ P
Sbjct: 582 CMSGRV-EGGKKLLDWMLEKNIHP-NAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGP 639
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK 273
+E T++ILI + A + EA ++ MIQ G++ + +++L R L K K
Sbjct: 640 NENTYNILIKGHCKARN---MKEALYFHDEMIQ-KGFRLTATSYSALIRLLNKK-----K 690
Query: 274 YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+++ E +FH++ GL + D+Y I L+ +DN++
Sbjct: 691 KFVEARE-LFHDMRKEGLTAESDVYDFYIDLNFNEDNLE 728
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 152/361 (42%), Gaps = 19/361 (5%)
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
R +F L K + G+ + R+ F+ + +G P+ + LI AY V +DE
Sbjct: 307 RTEFGLMVK---FYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAY---AVGRDMDE 360
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQK 295
A S +M + G + SL V GG SK + + A++ F +
Sbjct: 361 ALSCVRKMKEEG-------IEMSLVTYSVI-VGGFSKAGHAEAADYWFDEAKRIHKTLNA 412
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
IY +I+ H N+ ER L +EM++ G + + +++ D + +
Sbjct: 413 SIYGKIIYAHCQTCNM--ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 470
Query: 356 LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
RL E + + Y K+G+ K+LE+ R M+E ++ Y +I K
Sbjct: 471 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 530
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIY 474
++ ++ ++ V+ GMKP + Y N+ + + +G DR E + + RP +
Sbjct: 531 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 590
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
+ +G++ ++ E+F+ M + + N +++ + KA +I D M
Sbjct: 591 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPT-VHTFNGLINGLVEKRQMEKAVEILDEMT 649
Query: 535 L 535
L
Sbjct: 650 L 650
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 122/291 (41%), Gaps = 20/291 (6%)
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYY----LQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
G+ P + L L +K G +SK + + E + HNL T + I +G + L
Sbjct: 477 GFTPTVVTYGCLIN-LYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI-----NGFVKL 530
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
+ + + ++M + G + + +++ G+++ A +T + + +
Sbjct: 531 KDWANAF------AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR 584
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA-SVPAYHKIIELLCKAEETELTES 423
T F+ + YAK G+ +SLE+F +M R G +V ++ +I L + + E
Sbjct: 585 PTTRTFMPIIHGYAKSGDMRRSLEVF-DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVE 643
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLK 482
++ E G+ +Y + Y ++G + F+ E + Y L++
Sbjct: 644 ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACC 703
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+G ++ A + M S + I N+ NI++ + GD +A + M
Sbjct: 704 KSGRMQSALAVTKEM-SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 753
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 139/332 (41%), Gaps = 16/332 (4%)
Query: 199 CRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN 258
C + + + G P +T+ ++ G +D AC + M +L G +P
Sbjct: 65 CEILREMVTRDGMAPDVVTYTSVVDGLCR---DGKMDRACEMVREM-KLKGVEP----DK 116
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
F AL++ G + + +A ++ +LTS + S LI + I +
Sbjct: 117 FTFSALIT--GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELF 174
Query: 319 LKKEMQQAGFEEGKEVLLSVL--RVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKME 375
+ EM++ G + V + L C K G++E A K L ++E +P + +
Sbjct: 175 QEMEMREDGAWKPDVVTYTALIDGFC-KSGNLEKAMK-MLGVMEGRKCVPNVVTYSSLLH 232
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
K G+ ++L++FR M + +V Y +I LC A + + LM E T
Sbjct: 233 GLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPA 292
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
SY L + Y LG + F E K C P+R Y + NA +E+A +
Sbjct: 293 DTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLL 352
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
+M + I + + +I+++ Y + FV+A
Sbjct: 353 ENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEA 384
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 69/363 (19%), Positives = 129/363 (35%), Gaps = 47/363 (12%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
M + ++ D T L D K K + + + VP+ +T+ L+ A
Sbjct: 179 MREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKA- 237
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
G LD+A ++ RM G P + +L L + + + A + + +
Sbjct: 238 --GDLDQALDLFRRMTS-KGCVPNVVTYTTLIHGLCAA------HKVDAARLLMDEMTAT 288
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
Y+ L+ + I++ + L KEM + ++R +E
Sbjct: 289 CCPADTVSYNALLDGYCRLGRIEEAK--QLFKEMAAKSCLPDRITYTCLVRGFCNASRLE 346
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQER----------- 396
+A + L +++ GI Y + Y++ F+++ E +EM R
Sbjct: 347 EA-RFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSS 405
Query: 397 --------------------LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
+ V Y +IE LC + TE +L++E V ++P
Sbjct: 406 LIDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPS 465
Query: 437 MPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
+ ++ ++ LG M + L + P Y LE G +E A E+F
Sbjct: 466 VGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFE 525
Query: 496 HMH 498
M
Sbjct: 526 VMR 528
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 4/164 (2%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSA-SVPAYHKIIELLCKAEETELTESLMKEFVETG 432
+ + K GE ++ EI REM R G A V Y +++ LC+ + + +++E G
Sbjct: 52 INGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKG 111
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAE 491
++P ++ L + N D + E L CR + + L I +A
Sbjct: 112 VEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAY 171
Query: 492 EIFN--HMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
E+F M D + + ++ + SG+ KA K+ +M
Sbjct: 172 ELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVM 215
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 155/390 (39%), Gaps = 30/390 (7%)
Query: 269 GGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
G L K L + + I ++T G + I++ LI H+Y + D L K+M G
Sbjct: 343 GCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI--HAYCRSGDYSYAYKLLKKMGDCGC 400
Query: 329 EEGKEVL-LSVLRVCAKEG----DV-EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGE 382
+ G V + + +C E DV E AEK + +L++ + G+
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
F K+ I REM + Y K+I LLC A + + L +E + P + +Y
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520
Query: 443 LTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQ 501
L + + +G+ + F E + + C PN Y + + A + A E+F M S+
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580
Query: 502 TIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKK 561
I N + ++ + SG KA +IY M +A + +D ++ ++
Sbjct: 581 CIP-NVVTYTALIDGHCKSGQIEKACQIYARM------RGNADIPDVDMYFKIDDGNIRD 633
Query: 562 PVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEW 621
P N+ + G L+ GLC K R ++ E + ++ L D + +
Sbjct: 634 P---NIFT------YGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK- 683
Query: 622 LHPSFKFWPKGRLVIPKLIHRWLTPRALAY 651
+ ++V K+ R P Y
Sbjct: 684 ----VGKLDEAQMVFTKMSERGYGPNVYTY 709
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 119/281 (42%), Gaps = 16/281 (5%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K RK + ++F+ ++++G +P+ +T+ LI + + G +++AC IY RM +
Sbjct: 562 KARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS---GQIEKACQIYARM-RGNADI 617
Query: 252 PRPSLHNSLFRALVSKPG---------GLSKYY-LQQAEFIFHNLLTSGLEIQKDIYSGL 301
P ++ + + P GL K + +++A + + G E +Y L
Sbjct: 618 PDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDAL 677
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
I +D+ ++ K M + G+ S++ K+ ++ A K R+LE+
Sbjct: 678 IDGFCKVGKLDEAQMVFTK--MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN 735
Query: 362 DNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
+ ++ K+G+ ++ + M+E+ +V Y +I+ KA + +
Sbjct: 736 SCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKC 795
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
LM++ G P +Y L N G+ D H E
Sbjct: 796 LELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 127/352 (36%), Gaps = 59/352 (16%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG--G 249
++R+ +C+ I +I +G PS F+ LI AY + + Y + ++G G
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRS------GDYSYAYKLLKKMGDCG 399
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
QP ++N L + S L+ AE + +L + +
Sbjct: 400 CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVV----------------- 442
Query: 310 NIDKERISLLKKEMQQAG-FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
++K +S L + + AG FE+ S++R +G + D T
Sbjct: 443 -LNKVNVSNLARCLCGAGKFEKA----YSIIREMMSKGFIPD----------------TS 481
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
+ + + + +F EM+ V Y +I+ CK + E
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEM 541
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNI 487
V G P + +Y L + YL + F L E C PN Y ++ +G I
Sbjct: 542 VRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQI 601
Query: 488 EKAEEIFNHMHSDQTI----------GVNTRSCNIILSAYLSSGDFVKAEKI 529
EKA +I+ M + I N R NI L G KA K+
Sbjct: 602 EKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDG-LCKAHKV 652
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 101/469 (21%), Positives = 182/469 (38%), Gaps = 50/469 (10%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
K K R+ I + VP+ + ++ +I A +EA NRM P
Sbjct: 288 KVGKWREALSLIEKEDFVPNTILYNKMISGLCEASF---FEEAMDFLNRMRSTSCI---P 341
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
++ +R L+ G L+K L + + I ++ G I++ L+ H+Y + D
Sbjct: 342 NVQT--YRILLC--GCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLV--HAYCKSDDFS 395
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV------EDAEKTWLRLLESDNGIPTP 368
L K+M++ + G V ++ G++ E AEK + +L + +
Sbjct: 396 YAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKV 455
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTESLM 425
V G+F K+ ++ EM +G+ VP Y ++I LC A E L
Sbjct: 456 NVVSFARCLCGFGKFEKAYKVIHEM---MGNGFVPDTSTYSEVIGFLCNASRVENAFFLF 512
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNA 484
KE TG+ P + +Y L + + G+ + H E + + C P Y + + A
Sbjct: 513 KEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA 572
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAW 544
+ A E+F M + N + ++ Y SG+ KA +IY M A
Sbjct: 573 KKVSVANELFELMIAKGCFP-NVITYTALIDGYCKSGNIEKACQIYARM------RGDAD 625
Query: 545 MEKLDYVLSLNRKEVKKPVSLNLSSEQRENLI--GLLLGGLCIESDEKRKRHMIRFQFNE 602
+ +D + +KP N++ G L+ GLC K R ++ F +
Sbjct: 626 IPDVDMYFKIKNNVAEKP-----------NVVTYGALVDGLCKAHKVKDARDLLETMFVD 674
Query: 603 NSRMHSVLRRYLYDQYHEWLHPSFKFWPKGRLVIPKLIHRWLTPRALAY 651
++++ L D + + + + V K++ R P Y
Sbjct: 675 GCEPNTIVYDALIDGFCKAAK-----LDEAQEVFHKMVERGYNPNVYTY 718
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 139/350 (39%), Gaps = 58/350 (16%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K +K + ++F+ +I +G P+ +T+ LI Y + G +++AC IY RM +
Sbjct: 571 KAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKS---GNIEKACQIYARM-RGDADI 626
Query: 252 PRPSLHNSLFRALVSKPG---------GLSKYY-LQQAEFIFHNLLTSGLEIQKDIYSGL 301
P ++ + + KP GL K + ++ A + + G E +Y L
Sbjct: 627 PDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDAL 686
Query: 302 I--------------------------WLHSYQDNIDK----ERISLLKK---EMQQAGF 328
I +++Y ID+ +R+ L+ K +M +
Sbjct: 687 IDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSC 746
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
+ ++ +K ++A K L + E + ++ + K G+ K LE
Sbjct: 747 APNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLE 806
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY- 447
+FREM + + + Y +I C + +L++E +T + SY + Y
Sbjct: 807 LFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYK 866
Query: 448 ----LNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEI 493
L+LG+ + + S P +Y + +++ AG +E A E+
Sbjct: 867 REFILSLGLLEEVEKNGSA------PTILLYKVLIDNFVKAGRLEVALEL 910
>gi|168054024|ref|XP_001779433.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669118|gb|EDQ55711.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 166/387 (42%), Gaps = 36/387 (9%)
Query: 131 LVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
+V ILN+ K W RQ ++ W+ +H + + +
Sbjct: 13 VVAILNSLKSW-RQ------------------ALLLFRWLRAEHSSSLNIYTYNVMLKVL 53
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
+ R++ + I +D+ N P +T+ LI Q D A + ++RM + G
Sbjct: 54 RRGRQWEFSQQIAEDMANADVRPDNITYSTLISCANRCNYQ---DAAMAWFDRMHEAGCV 110
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
P + + ++ G + KY +A ++ + +G + K Y ++ L
Sbjct: 111 ---PDVVT--YSTMIDVYGKMGKY--DEAIALYERVKQAGWKPDKVTYGTMVRLFGRAGY 163
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
I + +S+ + EM+ +G + V ++ + G + A K + + E + P
Sbjct: 164 I-RAAVSIFE-EMKGSGVQPDAIVYNIMIACLGRAGRMGHALKVFEEM-EREGVKPNAVT 220
Query: 371 VYK-MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
+ ME Y++ G M+ LE+F+ +++ + + V Y+ ++++ +A E ++E
Sbjct: 221 LSTVMETYSRCGNVMEGLEVFQRLRQGV-ACDVIVYNAVLKMCREAGLASEAEQYLREMT 279
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIE 488
E+G +P +Y N+ ++Y GM H FS+ +E + + Y L++ NA
Sbjct: 280 ESGHQPNDWTYRNMISVYAKKGMAVEAHRTFSQMVEAGYQIDVMAYTSLLQAYGNAKEYN 339
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILS 515
K +EI + M S + R C +IL+
Sbjct: 340 KVQEILDEMTS-VNCAPDERLCCVILN 365
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 142/334 (42%), Gaps = 21/334 (6%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M D + T + D +GKE K + +D+ ++ P+ +T+ +L+ A+ A
Sbjct: 355 MVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRA-- 412
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY--YLQQAE--FIFHNL 286
G +D A + +M + P +S+ LV K G ++K Y+++ + I N+
Sbjct: 413 -GNIDGAEQMLLQM-EEKSVSPNVVTFSSILNGLV-KRGCIAKAAGYMRKMKDSGIAPNV 469
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEG 346
+T G I G + +D R +M G E ++ S++ K G
Sbjct: 470 VTYGTLID-----GFFKCQGQEAALDVYR------DMLHEGVEANNFIVDSLVNGLRKNG 518
Query: 347 DVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
++E+AE + + E + + M+ K G +L++ +E+ ER S Y+
Sbjct: 519 NIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYN 578
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-E 465
I LC+ + +S +KE TG++P +Y + + G + +E
Sbjct: 579 VFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWS 638
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+PN Y + L AG +EKA+ + N M S
Sbjct: 639 SIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMAS 672
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 4/187 (2%)
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT-PAFV 371
E + LL EM G + +V+ KEG +E+A K LR SDN P +
Sbjct: 346 NESLGLLG-EMVSRGVAMDLVMYTTVMDRLGKEGKIEEA-KDVLRHALSDNITPNCVTYT 403
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
++A+ + G + ++ +M+E+ S +V + I+ L K M++ ++
Sbjct: 404 VLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDS 463
Query: 432 GMKPLMPSYINLTNMYLNL-GMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKA 490
G+ P + +Y L + + G L + E N I + L+ GNIE+A
Sbjct: 464 GIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEA 523
Query: 491 EEIFNHM 497
E +F M
Sbjct: 524 EALFKDM 530
Score = 42.7 bits (99), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 76/390 (19%), Positives = 156/390 (40%), Gaps = 27/390 (6%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+ + E VY M+ + +F + L + + K + +F D+ +G +
Sbjct: 481 KCQGQEAALDVYRDMLHEGVEANNF-IVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDH 539
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+ + L+ G + A + +++ P ++N L L K+
Sbjct: 540 VNYATLMDGLFK---TGNMPAALKVGQELMERN-LSPDAVVYNVFINCLCR----LGKF- 590
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+A+ + +GLE + Y+ +I + N K + LL EM+ + + +
Sbjct: 591 -SEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKA-LKLLN-EMKWSSIKP-NLIT 646
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
+ L V E V + K L + S PTP Y+ A G +S + E+ E
Sbjct: 647 YTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTP-LTYRRVLQACSGS--RSPYVILEVHE 703
Query: 396 RLGSASVPA----YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
+ A + A Y+ ++ +LC T ++ E + G+ P ++ L +
Sbjct: 704 LMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSS 763
Query: 452 MHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV--NTR 508
D +++ L + PN + L L++AG I +A+ + M + +G+ N
Sbjct: 764 HLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEM---KKMGLEPNNL 820
Query: 509 SCNIILSAYLSSGDFVKAEKIYDLMCLKKY 538
+ +I+++ Y + V+A ++Y M K +
Sbjct: 821 TYDILVTGYAKKSNKVEALRLYCEMVSKGF 850
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 81/194 (41%), Gaps = 14/194 (7%)
Query: 153 HCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRV 212
HC + + F Y M+ Q + A L + + + + ++ G
Sbjct: 759 HC-KSSHLDNAFATYAQMLHQGLSP-NIATFNTLLGGLESAGRIGEADTVICEMKKMGLE 816
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ +T+ IL+ Y + EA +Y M+ G+ P+ S +NSL +K G
Sbjct: 817 PNNLTYDILVTGYAKKSNK---VEALRLYCEMVS-KGFIPKASTYNSLISDF-AKAG--- 868
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ QA+ +F + G+ Y I L+ + + + +L K+M++ GF+ K
Sbjct: 869 --MMNQAKELFSEMKRRGVLHTSSTYD--ILLNGWSKLRNGTEVRILLKDMKELGFKPSK 924
Query: 333 EVLLSVLRVCAKEG 346
+ S+ R +K G
Sbjct: 925 GTISSMSRAFSKPG 938
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
++ + G F ++ +FREM + + + Y I+ L K + + L+ E V G+
Sbjct: 301 VDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGV 360
Query: 434 KPLMPSYINLTNMYLNLG----MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEK 489
+ Y + + G D L A S+ + PN Y + +++ AGNI+
Sbjct: 361 AMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNIT---PNCVTYTVLVDAHCRAGNIDG 417
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
AE++ M ++++ N + + IL+ + G KA
Sbjct: 418 AEQMLLQME-EKSVSPNVVTFSSILNGLVKRGCIAKA 453
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 150/330 (45%), Gaps = 22/330 (6%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSL--HNS 259
+FD++++ G VP+ +T++ +I ++ G L+ + ++M+ G P+P++ +N
Sbjct: 38 VFDEMVDMGVVPNWITYNTMIDGHVKG---GDLEAGFRLRDQMLHDG---PKPNIVTYNV 91
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
L L + G + + + E H++ G ++ GL + + +SL
Sbjct: 92 LLSGLC-RAGRMDETRVLMDEMASHSMFPDGFTYSI-LFDGLT-----RTGESRTMLSLF 144
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAY 377
+ +++ G G +L K+G V AE+ L +L +PT +Y + Y
Sbjct: 145 AESLKK-GVMLGAYTCSILLNGLCKDGKVAKAEQV-LEMLVHTGLVPT-TVIYNTLINGY 201
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
++ + + IF +M+ R Y+ +I LCK E E L+ E ++G+ P +
Sbjct: 202 CQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSV 261
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI-YGIYLESLKNAGNIEKAEEIFNH 496
++ L + Y G ++ S+ +K + I +G +++ G I +A I +
Sbjct: 262 ETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDD 321
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
M + + N + N I+ AY+ SGD +A
Sbjct: 322 MIY-KDVAPNAQVYNSIIDAYIESGDTEQA 350
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 139/314 (44%), Gaps = 15/314 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + + K+ K AK + + +++ G VP+ + ++ LI Y L A I+
Sbjct: 162 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRD---LRGAFCIFE--- 215
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
Q+ RP + + AL++ GL K + +AE + + SG++ + ++ LI
Sbjct: 216 QMKSRHIRPD--HITYNALIN---GLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI-- 268
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
+Y E+ + +MQQ G + SV++ K G + +A ++ D
Sbjct: 269 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA 328
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
+ ++AY + G+ ++ + +M+ SAS+ Y+ +++ LC++ + + E L
Sbjct: 329 PNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 388
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTIYGIYLESLKN 483
+ G++P + SY + + N G D+ L L RP Y + +L +
Sbjct: 389 IYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALAS 448
Query: 484 AGNIEKAEEIFNHM 497
AG + E ++ M
Sbjct: 449 AGRVHDMECLYQQM 462
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 132/303 (43%), Gaps = 18/303 (5%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
T + +C ++R+ F ++E M +H R D L + + K K D+ ++
Sbjct: 196 TLINGYC-QVRDLRGAFCIFEQMKSRHI-RPDHITYNALINGLCKLEMVTKAEDLVMEME 253
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
G PS TF+ LI AY +A G L++ ++ + M Q G S S+ +A K
Sbjct: 254 KSGVDPSVETFNTLIDAYGTA---GQLEKCFTVLSDMQQKGIKSDVISF-GSVVKAFC-K 308
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
G + +A I +++ + +Y+ +I +Y ++ D E+ LL ++M+ +G
Sbjct: 309 NG-----KIPEAVAILDDMIYKDVAPNAQVYNSII--DAYIESGDTEQAFLLVEKMKNSG 361
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMK 385
+L+ + +++AE+ L + G+ Y + A G+ K
Sbjct: 362 VSASIVTYNLLLKGLCRSSQIDEAEELIYTL--RNQGLRPDVVSYNTIISACCNKGDTDK 419
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+LE+ +EM + ++ YH ++ L A E L ++ + ++P Y + +
Sbjct: 420 ALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVD 479
Query: 446 MYL 448
Y+
Sbjct: 480 AYV 482
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/323 (19%), Positives = 135/323 (41%), Gaps = 50/323 (15%)
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM----------- 244
FA IF+D+I G P +++L+ A+ G +D A I+ RM
Sbjct: 477 FANAFSIFEDMIKSGLQPDRAIYNLLVEAFCK---MGNMDRAIRIFERMQKERMQPSNRT 533
Query: 245 -----------------------IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF 281
++ G P +N+L LV K + +++A
Sbjct: 534 FRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRK------HQVEKAVS 587
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+ + +G+ + Y+ ++ ++ +I K K ++++G + + ++LR
Sbjct: 588 VLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTK--IKESGLKLDVYIYETLLRA 645
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGS 399
C K G ++ A + S IP F+Y + + +A+ G+ ++ ++ ++M+E
Sbjct: 646 CCKSGRMQSALAVTREM--SFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIP 703
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
++ + I CKA + + E++++E + G+KP + ++ L + + + DR
Sbjct: 704 PNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKC 763
Query: 460 FSECLEK-CRPNRTIYGIYLESL 481
F E +P+ Y + SL
Sbjct: 764 FEEMKSAGLKPDEAAYHCLVTSL 786
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 150/363 (41%), Gaps = 62/363 (17%)
Query: 222 IVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL--VSKP-----GGLSKY 274
+V S+P ++AC + R+++ RP ++ A + KP G + Y
Sbjct: 206 VVREASSPWHKGREDACREFRRVLE-----SRPEDWQAVVSAFERIPKPSRREFGLMVVY 260
Query: 275 YLQQ-----AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
Y ++ A F N+ G+E +++ L+ H+Y D +EM+ G E
Sbjct: 261 YAKRGDKHHARATFENMRARGIEPNAFVFTSLV--HAYAVAGDMRGALSCVEEMKSEGIE 318
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRL---LESDNGIPTPAFVYKMEAYAKIGEFMKS 386
++ K D + A+ + L++ NGI ++ A+ + G ++
Sbjct: 319 MTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIH---AHCQSGNMDRA 375
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNM 446
E+ REM+E A + YH ++ ++ + + + E G KP + SY L N+
Sbjct: 376 EELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINL 435
Query: 447 YLNLG---------------------------MHDRLHL-----AFS--ECLEKC--RPN 470
Y+ +G ++ +HL AFS E + K +P+
Sbjct: 436 YVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPD 495
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
R IY + +E+ GN+++A IF M ++ N R+ I+ + +GD +A
Sbjct: 496 RAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSN-RTFRPIIEGFAVAGDMKRAFDTL 554
Query: 531 DLM 533
DLM
Sbjct: 555 DLM 557
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 130/312 (41%), Gaps = 21/312 (6%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSI-YNRMIQLGGYQPR 253
+F R + D + +Q P ++F+ LI A + GCL ++ ++ G +P
Sbjct: 9 RFDDARQLLDAMRDQDIEPDLVSFNTLINARAKS---GCLAAGVALELLHEVRQAGLRPD 65
Query: 254 PSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI--YSGLIWLHSYQDNI 311
+N+L A L A +F ++ S E + D+ Y+ ++ +H
Sbjct: 66 AITYNTLISACSQGSN------LDDAVAVFEEMIAS--ECRPDLWTYNAMVSVHGRCGK- 116
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
+ L+ KE+ + GF+ S+L AKEGDVE E+ L+++ G
Sbjct: 117 -AQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKA--GFRKDGIT 173
Query: 372 YK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
Y + Y K+G +L ++ EM+ + Y +++ L K + +++E
Sbjct: 174 YNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMA 233
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIE 488
+ G+KP + ++ L Y G D F +E +P+R Y + L+ +
Sbjct: 234 DAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETR 293
Query: 489 KAEEIFNHMHSD 500
K ++ M D
Sbjct: 294 KLMVLYRAMIKD 305
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 139/336 (41%), Gaps = 20/336 (5%)
Query: 138 QKKWLRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERK 195
++ LR + TY L C + + V+E M+ R D + G+ K
Sbjct: 58 RQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASEC-RPDLWTYNAMVSVHGRCGK 116
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS 255
+ +F +++ +G P +T++ L+ A+ +G ++ + +++ G++
Sbjct: 117 AQEAELMFKELVEKGFQPDAVTYNSLLYAFAK---EGDVERVERVCEELVK-AGFRKDGI 172
Query: 256 LHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER 315
+N++ + K G L A ++ + G Y+ L+ D I +
Sbjct: 173 TYNTMIH-MYGKMG-----RLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAG 226
Query: 316 ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME 375
L +EM AG + +++ AK G +DAE+T+ R++ES A++ ++
Sbjct: 227 KVL--EEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLD 284
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET-GMK 434
+A+ E K + ++R M + Y ++ L K E + E ++++ M
Sbjct: 285 VFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMN 344
Query: 435 PLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPN 470
PL+ S I + ++ G L CL+ P+
Sbjct: 345 PLVISSILIKAECISQGA----SLLKRACLQGYEPD 376
>gi|68566156|sp|P0C043.1|PP318_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At4g17915
Length = 463
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 179/464 (38%), Gaps = 67/464 (14%)
Query: 181 ALATKL----ADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
L+T+L D + K RK K + D I G P +T++ LI Y ++E
Sbjct: 10 GLSTRLLNICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVG---IEE 66
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
A ++ RM + G +P + +NSL G + L ++F +L G+
Sbjct: 67 AYAVTRRM-RDAGIRPDVATYNSLI------AGAARRLMLDHVLYLFDEMLEWGIYPDLW 119
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA----- 351
Y+ L+ + ++ +E +L K++Q AG G + +L K G +++A
Sbjct: 120 SYNTLMCCY-FKLGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFK 178
Query: 352 ---------------------------EKTWLRLLESDNGIPTPAFVYK--MEAYAKIGE 382
W+ +G A Y ++ Y K
Sbjct: 179 EMQSRFKPELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRR 238
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
+ L++F EM+ + AY ++ L K T+ M+E V G + + SY
Sbjct: 239 IRRGLQLFLEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNT 298
Query: 443 LTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQ 501
L N+Y G D + E + + + + I + L G +AEE F M +
Sbjct: 299 LLNLYFKDGNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEEHFVSM-GEM 357
Query: 502 TIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL----------DYV 551
IG+N +CN ++ +G +A + ++ M +K ++ + L +
Sbjct: 358 GIGLNLVTCNCLVDGLCKAGHVDRAMRYFESMEVKDEYTYTSVVHNLCKDMRFVCASKLL 417
Query: 552 LSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHM 595
LS K +K P +S +R L GL + G C K K M
Sbjct: 418 LSCYNKGIKIP-----TSARRAVLSGLRMSG-CYGEARKAKAEM 455
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 171/387 (44%), Gaps = 27/387 (6%)
Query: 155 MRIREN-ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
+R+R+ ++ + W++ + ++ D L + G++ + + + ++ +P
Sbjct: 129 LRMRKQWDSIISICRWILLRSSFKPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIP 188
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK 273
+E T+ +LI AY + G L++A +++ M G ++N+ L+ GG S
Sbjct: 189 TEDTYALLIKAYC---ISGLLEKAEAVFAEMRNYG-LPSSAVVYNAYINGLMK--GGNS- 241
Query: 274 YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL-LKKEMQQAGFEEGK 332
+AE IF + + + Y+ LI L+ K ++L L EM +
Sbjct: 242 ---DKAEEIFKRMKKDACKPTTETYTMLINLYG---KAGKSFMALKLFHEMMSHDCKPNI 295
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIF 390
+++ A+EG E AE+ + ++ E+ G+ + Y MEAY++ G + EIF
Sbjct: 296 CTYTALVNAFAREGLCEKAEEVFEQMQEA--GLEPDVYAYNALMEAYSRAGYPYGAAEIF 353
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
MQ +Y+ +++ KA + E++ K+ G+ P M S++ L + Y +
Sbjct: 354 SLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKM 413
Query: 451 GMHDRLHLAFSECLEKCRPNRTIYGIYLESLKN----AGNIEKAEEIFNHMHSDQTIGVN 506
G ++ + + C+ + L S+ N G K EE+ M + +
Sbjct: 414 GSVNKCEEILN---QMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVA-D 469
Query: 507 TRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ NI+++ Y +G + E ++ L+
Sbjct: 470 ISTYNILINRYGQAGFIERMEDLFQLL 496
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 124/303 (40%), Gaps = 14/303 (4%)
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQ 294
D SI ++ ++P +N L A K ++AE + LL +
Sbjct: 136 DSIISICRWILLRSSFKPDVICYNLLIEAFGQK------LLYKEAESTYLQLLEARCIPT 189
Query: 295 KDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKT 354
+D Y+ LI + ++K EM+ G V + + K G+ + AE+
Sbjct: 190 EDTYALLIKAYCISGLLEKAEAVF--AEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEI 247
Query: 355 WLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCK 414
+ R+ + T + + Y K G+ +L++F EM ++ Y ++ +
Sbjct: 248 FKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAR 307
Query: 415 AEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTI 473
E E + ++ E G++P + +Y L Y G FS C P+R
Sbjct: 308 EGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRAS 367
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN--TRSCNIILSAYLSSGDFVKAEKIYD 531
Y I +++ AG + AE +F M + +G+ +S ++LSAY G K E+I +
Sbjct: 368 YNILVDAYGKAGFQDDAEAVFKDM---KRVGITPTMKSHMVLLSAYSKMGSVNKCEEILN 424
Query: 532 LMC 534
MC
Sbjct: 425 QMC 427
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 135/318 (42%), Gaps = 13/318 (4%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + GK K +F ++++ P+ T+ L+ A+ +G ++A ++ +
Sbjct: 264 TMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAR---EGLCEKAEEVFEQ 320
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M Q G +P +N+L A S+ G Y A IF + G E + Y+ I
Sbjct: 321 M-QEAGLEPDVYAYNALMEAY-SRAG-----YPYGAAEIFSLMQHMGCEPDRASYN--IL 371
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ +Y ++ + K+M++ G + + +L +K G V E+ ++ +S
Sbjct: 372 VDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGL 431
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
+ T + Y ++G+F K E+ R M++ A + Y+ +I +A E E
Sbjct: 432 KLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMED 491
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLK 482
L + G+KP + ++ + Y ++ + F E ++ C P+ + L +
Sbjct: 492 LFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPDGGTAKVLLAACS 551
Query: 483 NAGNIEKAEEIFNHMHSD 500
N E+ + MH D
Sbjct: 552 NEDQTEQVTTVIRTMHKD 569
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 154/363 (42%), Gaps = 23/363 (6%)
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
R +F L K + G+ + R+ F+ + +G P+ + LI AY V +DE
Sbjct: 309 RTEFGLMVK---FYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAY---AVGRDMDE 362
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSL--FRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEI 293
A S +M + G + SL + +V GG SK + + A++ F +
Sbjct: 363 ALSCVRKMKEEG-------IEMSLVTYSVIV---GGFSKAGHAEAADYWFDEAKRIHKTL 412
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
IY +I+ H N+ ER L +EM++ G + + +++ D +
Sbjct: 413 NASIYGKIIYAHCQTCNM--ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLV 470
Query: 354 TWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
+ RL E + + Y K+G+ K+LE+ R M+E ++ Y +I
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 414 KAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRT 472
K ++ ++ ++ V+ GMKP + Y N+ + + +G DR E + + RP
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDL 532
+ + +G++ ++ E+F+ M + + N +++ + KA +I D
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV-PTVHTFNGLINGLVEKRQMEKAVEILDE 649
Query: 533 MCL 535
M L
Sbjct: 650 MTL 652
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 122/291 (41%), Gaps = 20/291 (6%)
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYY----LQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
G+ P + L L +K G +SK + + E + HNL T + I +G + L
Sbjct: 479 GFTPTVVTYGCLIN-LYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI-----NGFVKL 532
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
+ + + ++M + G + + +++ G+++ A +T + + +
Sbjct: 533 KDWANAF------AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR 586
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA-SVPAYHKIIELLCKAEETELTES 423
T F+ + YAK G+ +SLE+F +M R G +V ++ +I L + + E
Sbjct: 587 PTTRTFMPIIHGYAKSGDMRRSLEVF-DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVE 645
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLK 482
++ E G+ +Y + Y ++G + F+ E + Y L++
Sbjct: 646 ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACC 705
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+G ++ A + M S + I N+ NI++ + GD +A + M
Sbjct: 706 KSGRMQSALAVTKEM-SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 755
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/435 (20%), Positives = 175/435 (40%), Gaps = 47/435 (10%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
R +FD++ + P +T+ ILI Y + G L+ A + + M+ G +P +++ S
Sbjct: 282 RQLFDEMASP---PDVVTYGILIHGYCAL---GELENAVKLLDDMVARG-VEPNATVYTS 334
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLT---------SGLEIQKDIYSGLIWLHSYQDN 310
+ AL+ G +S + + H ++ SG + D+ S W
Sbjct: 335 VV-ALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWF------ 387
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
EMQ+ G +++ + G++++AEK +L + +
Sbjct: 388 ----------DEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTY 437
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
++ Y K G+ ++ ++ M +R + +V Y + + LCK + + L+ E
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSN 497
Query: 431 TGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEK 489
G++ +Y +L N G D+ ++ +P+ Y +++L +G +++
Sbjct: 498 KGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDR 557
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL- 548
A ++ M D I + N++++ + SG +K+ + M K + L
Sbjct: 558 AHDLLQEM-LDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLM 616
Query: 549 -DYVLSLNRKEV----KKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRH----MIRFQ 599
Y + N K K S N+ E EN +L+ G C K ++ MI
Sbjct: 617 KQYCIGNNMKSTTEIYKGMCSRNV--EPNENTYNILIKGHCKARSMKEAQYFHNEMIEKG 674
Query: 600 FNENSRMHSVLRRYL 614
F + +S L R L
Sbjct: 675 FRLTASSYSALIRLL 689
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADY-MGKERKFAKCRDIFDDIINQGRV 212
CM R E G ++ EWM++++ + + + Y +G K +I+ + ++
Sbjct: 585 CMSGRV-EGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMK--STTEIYKGMCSRNVE 641
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+E T++ILI + A + EA +N MI+ G++ S +++L R L K
Sbjct: 642 PNENTYNILIKGHCKA---RSMKEAQYFHNEMIE-KGFRLTASSYSALIRLLNKK----- 692
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
K +++ A +FH++ G + D+Y+ I + +DN++
Sbjct: 693 KKFVE-ARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLE 731
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 153/361 (42%), Gaps = 16/361 (4%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D L + GK K K ++ ++ + G +P ++++L+ AY S +G + A
Sbjct: 282 DITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYAS---KGDIRHAM 338
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
++ +M + R + + L++ GG +Y +F + S E Y
Sbjct: 339 GVFRQM-----QEARCVPNAVTYSMLLNLYGGHGRY--DDVRELFLEMKVSNTEPDVGTY 391
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+ LI + + KE ++L +M + E ++ C K G EDA+K L +
Sbjct: 392 NVLIEVFG-EGGYFKEVVTLFH-DMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHM 449
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
E T A+ +EAY + + ++L +F M E +V Y+ +I + +
Sbjct: 450 DEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLY 509
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGI 476
+ +E++M + E+G+ S+ + Y G + + E LEK R P+ +
Sbjct: 510 KESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVE-LEKARFQPDERTFEA 568
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
L AG ++++EE F + + + C ++++ Y S + A ++ D M
Sbjct: 569 VLSVYCTAGLVDESEEQFREIRASGILPSVMCYC-MMIAVYARSNRWDDAYEVLDEMVTN 627
Query: 537 K 537
K
Sbjct: 628 K 628
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 174/409 (42%), Gaps = 19/409 (4%)
Query: 129 GTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLAD 188
G++ R L K L D + + + + R++++M +Q W + + + T +
Sbjct: 91 GSIARCLEIFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIIS 150
Query: 189 YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG 248
+G+E K +IF+++ G S ++ LI +Y G + + + RM +
Sbjct: 151 LLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGR---HGQYEVSLELLERMKK-- 205
Query: 249 GYQPRPSL--HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHS 306
+ PS+ +N++ + GGL+ L +F + G IQ DI + L++
Sbjct: 206 -EKVTPSILTYNTVINSCAR--GGLNWEGLLS---LFAEMRHEG--IQPDIITYNTLLNA 257
Query: 307 YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
+ + ++ + M + G +++ K +E + L+ +ES +P
Sbjct: 258 CANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSEL-LKEMESSGNLP 316
Query: 367 -TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
++ +EAYA G+ ++ +FR+MQE + Y ++ L + L
Sbjct: 317 DISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELF 376
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNA 484
E + +P + +Y L ++ G + F + +E+ PN Y + +
Sbjct: 377 LEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKG 436
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G E A++I HM ++ I +T++ ++ AY + + +A +++ M
Sbjct: 437 GLHEDAKKILLHM-DEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTM 484
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 186/446 (41%), Gaps = 28/446 (6%)
Query: 138 QKKWLRQEDGTYLAVHCMRIRENET--GFRVYEWMMQQHWYRFDFALATKLADYMGKERK 195
Q K L+ TY ++ + + + G +V MM++ + D + T L D K
Sbjct: 172 QLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFP-DHVIYTTLIDGFCKLGN 230
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS 255
+F ++ + VP + F LI LS G + EA ++N MI+ G++P
Sbjct: 231 TQAAYKLFSEMEAREIVPDSIAFSALICG-LSG--SGKVVEADKLFNEMIK-KGFEPDEV 286
Query: 256 LHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK-- 313
+ +L G K + F HN + +Q + ++ + D + K
Sbjct: 287 TYTALI-------DGYCKLGEMKKAFFLHNQM-----VQIGLTPNVVTYTALADGLCKSG 334
Query: 314 --ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
+ + L EM + G + +++ K G++ A K + E+ T +
Sbjct: 335 ELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYT 394
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
M+AY K GE +K+ E+ REM +R +V ++ ++ LC + + E E L+K +E
Sbjct: 395 TLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEK 454
Query: 432 GMKPLMPSYINLTNMY-LNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKA 490
G+ P +Y ++ Y + M + C + P+ Y I ++ A N+++A
Sbjct: 455 GIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEA 514
Query: 491 EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDY 550
+ M ++ + S N ++ + ++A ++++ M + E A E +
Sbjct: 515 WFLHKEM-VEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEM---RREGLVASAEIYNL 570
Query: 551 VLSLNRKEVKKPVSLNLSSEQRENLI 576
+ +N +E +L L E E +
Sbjct: 571 FVDMNYEEGNMETTLELCDEAIEKCL 596
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 16/249 (6%)
Query: 254 PSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQK---DIYSGLIWLHSYQDN 310
P + + F+ LV GL L +A F LL G+ + ++Y L L S +D
Sbjct: 39 PHVFDVFFQVLVE--AGL----LNEARKFFDKLLNYGVALSAGSCNLY--LTCLSSKRDM 90
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPA 369
+ + + E Q G E ++ + G + +A +R+ E IP +
Sbjct: 91 LG--MVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRM-EFKGCIPDVVS 147
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
+ ++ Y +GE K +++ +EMQ + ++ Y II LLCK+ + E +++E +
Sbjct: 148 YTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMM 207
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIE 488
+ G+ P Y L + + LG + FSE + P+ + + L +G +
Sbjct: 208 KRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVV 267
Query: 489 KAEEIFNHM 497
+A+++FN M
Sbjct: 268 EADKLFNEM 276
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 131/290 (45%), Gaps = 17/290 (5%)
Query: 188 DYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL 247
D MGK + I +++ N+G + +T++ +I + + + LDEA ++Y +++
Sbjct: 112 DAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKM---LDEAINLYYQLMS- 167
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
G+ P P + L L+ K G ++ AE +F +L G E IY+ I L+ Y
Sbjct: 168 EGFSPTPCTYGPLLDGLL-KDGN-----IEDAEALFDEMLECGCEPNCAIYN--ILLNGY 219
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+ D E++ L + M + G + V+ +G + D + +L +D G+
Sbjct: 220 RIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQL--TDMGLEP 277
Query: 368 PAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
Y + K G ++L ++ +M+++ + ++ Y+ +I L KA + +
Sbjct: 278 DLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMY 337
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIY 474
+E + G KP + +Y L Y G + A+ + CRPN + Y
Sbjct: 338 EELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 387
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Query: 364 GIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
G F Y + +A K L+I EM + ++ Y+ II L K++ +
Sbjct: 99 GCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEA 158
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLES 480
+L + + G P +Y L + L G + F E LE C PN IY I L
Sbjct: 159 INLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNG 218
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
+ AG+ EK E+F M +Q + + +S +++ + G
Sbjct: 219 YRIAGDTEKVCELFESM-VEQGMNPDIKSYTVVIDTLCADG 258
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 18/243 (7%)
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
I SGL+ + + E I+L + M + GF +L K+G++EDAE +
Sbjct: 145 IISGLV-----KSKMLDEAINLYYQLMSE-GFSPTPCTYGPLLDGLLKDGNIEDAEALFD 198
Query: 357 RLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCK 414
+LE G +Y + Y G+ K E+F M E+ + + +Y +I+ LC
Sbjct: 199 EMLEC--GCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCA 256
Query: 415 AEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS--ECLEK--CRPN 470
S K+ + G++P + +Y L + LG RL A S +EK PN
Sbjct: 257 DGRLNDGLSYFKQLTDMGLEPDLITYNLLIH---GLGKSGRLEEALSLYNDMEKKGIAPN 313
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
Y + L AG +A +++ + + + N + N ++ Y SG A Y
Sbjct: 314 LYTYNSLILYLGKAGKAAEAGKMYEELLA-KGWKPNVFTYNALIRGYSVSGSPENAFAAY 372
Query: 531 DLM 533
M
Sbjct: 373 GRM 375
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 131/290 (45%), Gaps = 17/290 (5%)
Query: 188 DYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL 247
D MGK + I +++ N+G + +T++ +I + + + LDEA ++Y +++
Sbjct: 809 DAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKM---LDEAINLYYQLMS- 864
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
G+ P P + L L+ K G ++ AE +F +L G E IY+ I L+ Y
Sbjct: 865 EGFSPTPCTYGPLLDGLL-KDGN-----IEDAEALFDEMLECGCEPNCAIYN--ILLNGY 916
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+ D E++ L + M + G + V+ +G + D + +L +D G+
Sbjct: 917 RIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQL--TDMGLEP 974
Query: 368 PAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
Y + K G ++L ++ +M+++ + ++ Y+ +I L KA + +
Sbjct: 975 DLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMY 1034
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIY 474
+E + G KP + +Y L Y G + A+ + CRPN + Y
Sbjct: 1035 EELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 2/149 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
++A K L+I EM + ++ Y+ II L K++ + +L + + G
Sbjct: 808 LDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGF 867
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEE 492
P +Y L + L G + F E LE C PN IY I L + AG+ EK E
Sbjct: 868 SPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCE 927
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
+F M +Q + + +S +++ + G
Sbjct: 928 LFESM-VEQGMNPDIKSYTVVIDTLCADG 955
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 14/241 (5%)
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
I SGL+ + + E I+L + M + GF +L K+G++EDAE +
Sbjct: 842 IISGLV-----KSKMLDEAINLYYQLMSE-GFSPTPCTYGPLLDGLLKDGNIEDAEALFD 895
Query: 357 RLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
+LE + + Y G+ K E+F M E+ + + +Y +I+ LC
Sbjct: 896 EMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADG 955
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS--ECLEK--CRPNRT 472
S K+ + G++P + +Y L + LG RL A S +EK PN
Sbjct: 956 RLNDGLSYFKQLTDMGLEPDLITYNLLIH---GLGKSGRLEEALSLYNDMEKKGIAPNLY 1012
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDL 532
Y + L AG +A +++ + + + N + N ++ Y SG A Y
Sbjct: 1013 TYNSLILYLGKAGKAAEAGKMYEELLA-KGWKPNVFTYNALIRGYSVSGSPENAFAAYGR 1071
Query: 533 M 533
M
Sbjct: 1072 M 1072
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 150/373 (40%), Gaps = 16/373 (4%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M H + D + L DY+ K + + R+IFD +I +G P+ + IL+ Y +
Sbjct: 263 MSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYAT--- 319
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G L E S + M+ G P + N +F A K + +A IF +
Sbjct: 320 EGSLSEMHSFLDLMVG-NGVSPDHHIFNIMFCAYAKKA------MIDEAMHIFDKMRQQR 372
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
L Y LI +D + +M G V S++ E
Sbjct: 373 LSPNIVTYGALIDALCKLGRVDDAVLKF--NQMIDEGMTPDIFVFSSLVYGLCTVDKWEK 430
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
AE+ + +L+ + T F M + G M++ + M V +Y+ +++
Sbjct: 431 AEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVD 490
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRP 469
C + L+ V G+KP +Y L + Y D + F E L K P
Sbjct: 491 GHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTP 550
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFV-KAEK 528
+ Y L L G +A+E++ M + +T +N + NII++ L +FV +A K
Sbjct: 551 DVVTYNTILHGLFQTGRFSEAKELYLSMINSRT-QMNIYTYNIIING-LCKNNFVDEAFK 608
Query: 529 IYDLMCLKKYEIE 541
++ +C K +++
Sbjct: 609 MFHSLCSKDLQLD 621
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 127/335 (37%), Gaps = 42/335 (12%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS-LHNSL 260
+FD+++ R S F+ L+ A A + S++NRMI+ + PS ++
Sbjct: 38 LFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSFTYTI 97
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD-IYSGLIWLHSYQDNIDKERISLL 319
+ G L + F +L +G + I+S L+ +D E +L
Sbjct: 98 LIGCFCRMGRLKHGFAA-----FGLILKTGWRVNDTVIFSQLLKGLCDAKRVD-EATDIL 151
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAK 379
+ M + G +L+ E E+A + + + +G TP
Sbjct: 152 LRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTP----------- 200
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
+V Y +I+ LCKA+ + + + + ++ G++P +
Sbjct: 201 ---------------------NVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHT 239
Query: 440 YINLTNMYLNLGMHDRLHLAFSE-CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
Y L + YL++G + E +P+ IY + L+ L G +A IF+ +
Sbjct: 240 YTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVI 299
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ I N I+L Y + G + DLM
Sbjct: 300 R-KGIKPNVTIYGILLHGYATEGSLSEMHSFLDLM 333
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 140/381 (36%), Gaps = 92/381 (24%)
Query: 158 RENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMT 217
+E+ + ++W +Q Y+ D T + MG+ R F C + ++ +G P +T
Sbjct: 45 KESGLALKFFDWAKEQEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVT 104
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
++ LI AY A +L
Sbjct: 105 YNRLIHAYGRAN---------------------------------------------FLG 119
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHS---YQDNIDKERISLLKKEMQQAGFEEGKEV 334
+A IF+ + G + Y L+ LHS + DN + ++MQQAGF+
Sbjct: 120 EAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMD-----MYQKMQQAGFQPDTFT 174
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
++ K G V +A L++F EM
Sbjct: 175 YSVIIHCLGKAGKVSEA-----------------------------------LKLFEEMV 199
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
ER + S+ Y+ II+L K+ + L + + G P +Y + + +G
Sbjct: 200 ERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQ 259
Query: 455 RLHLAFSECLEKCR--PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI 512
L F+E +E+ P+ IYG+ ++ A N E+A E + M D + N + N
Sbjct: 260 EAELMFNE-MEQAGWVPDAPIYGVMVDMWGKARNAERALEWYQKM-LDSGLTPNVQISNS 317
Query: 513 ILSAYLSSGDFVKAEKIYDLM 533
+L +YL F A + + M
Sbjct: 318 LLGSYLRMQQFDLAFGVIETM 338
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 12/259 (4%)
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
AE F + GLE ++ L+ H+ N R + +EM + G +
Sbjct: 126 AELSFTEMREVGLEPNVACFTSLLEAHARTGNF--VRAESIYQEMLKTGPAPTEVTYQVY 183
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQER 396
+ K DAE+ + L ES P A +Y + Y K G+F + +FR+M+
Sbjct: 184 INALCKAERFNDAERIFKCLDESAEAKPD-ARLYNLMLHTYGKAGKFSEQQALFRQMK-- 240
Query: 397 LGSASVPAYHKIIELLCKAEETEL-TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
A VP L ++T E+ ++ +KP + +Y L N Y +
Sbjct: 241 --GAGVPMTVVTFNSLMAFQKTVADAEACLRHMQAAKIKPDVITYTGLINAYSKARRVEE 298
Query: 456 LHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
H+ F E + RP+R Y L++ +E AE +F M D+ + RS +L
Sbjct: 299 AHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDR-CRPDIRSYTTLL 357
Query: 515 SAYLSSGDFVKAEKIYDLM 533
+AY ++G+ KAE++ M
Sbjct: 358 AAYANTGNMKKAERLLKRM 376
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 83/410 (20%), Positives = 166/410 (40%), Gaps = 35/410 (8%)
Query: 129 GTLVRILNAQK--------KWLRQEDGTYLAVHCMRI------RENETGFRVYEWM-MQQ 173
GTL+R+ K WL+Q+D +H + + + G + M++
Sbjct: 76 GTLIRLRQLNKWTMVLEVLLWLKQQDWWNFGIHDFNLMIAAYGKLGQPGIAELSFTEMRE 135
Query: 174 HWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGC 233
+ A T L + + F + I+ +++ G P+E+T+ + I A A
Sbjct: 136 VGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYINALCKAER--- 192
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
++A I+ + + +P L+N + G K+ QQA +F + +G+ +
Sbjct: 193 FNDAERIFKCLDESAEAKPDARLYNLMLHTY----GKAGKFSEQQA--LFRQMKGAGVPM 246
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
++ L+ ++Q + L + MQ A + ++ +K VE+A
Sbjct: 247 TVVTFNSLM---AFQKTVADAEACL--RHMQAAKIKPDVITYTGLINAYSKARRVEEAHV 301
Query: 354 TWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
+ ++ S A+ ++AYAK E + +F+ M + + +Y ++
Sbjct: 302 VFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYA 361
Query: 414 KAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD-RLHLAFSECLEKC--RPN 470
+ E L+K + G++P + +Y L Y ++ HD L E L+K +PN
Sbjct: 362 NTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSV--HDINAMLQTFEDLQKAGIKPN 419
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSS 520
TI+ + + + + E A F M D + RS ++ A +S
Sbjct: 420 STIFTLLVRTFGQQEDFESALSWFKKML-DSGCPADQRSRAALMDACQTS 468
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 115/253 (45%), Gaps = 16/253 (6%)
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
E + + D+ ++ +G +P +T++ILI Y G A ++N M+ G +P
Sbjct: 326 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRC---GNAKRAFDLHNEMLS-KGIEP 381
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+ SL L + +++A+ +F +L G+ +++ +I H N+
Sbjct: 382 THVTYTSLIYVLSRR------NRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNV- 434
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
ER +L KEM + + ++++ +EG VE+A + GI Y
Sbjct: 435 -ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM--KXRGIKPDHISY 491
Query: 373 K--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
+ Y + G+ + + EM + ++ Y+ +I+ LCK +E +L E L+KE V
Sbjct: 492 NTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVN 551
Query: 431 TGMKPLMPSYINL 443
G+ P +Y++L
Sbjct: 552 KGISPDDSTYLSL 564
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 111/264 (42%), Gaps = 11/264 (4%)
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
GL + ++ S +H Y + E + M+ G E S++ KEG +E
Sbjct: 201 GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 260
Query: 350 DAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
+A + +++E G+ A Y ++ Y G+ ++ EM ++ SV Y+
Sbjct: 261 EASGLFDKMVEI--GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 318
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK- 466
++ L + ++KE + G+ P +Y L N Y G R +E L K
Sbjct: 319 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKG 378
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
P Y + L +++A+++F + DQ + + N ++ + ++G+ +A
Sbjct: 379 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL-DQGVSPDVIMFNAMIDGHCANGNVERA 437
Query: 527 EKIYDLMCLKKYEIESAWMEKLDY 550
M LK+ + +S +++ +
Sbjct: 438 -----FMLLKEMDRKSVPPDEVTF 456
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 2/181 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ Y+ G + I M+ + Y +I +CK E L + VE G+
Sbjct: 215 IHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGL 274
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEE 492
P +Y L + Y N G +R E ++K P+ + Y + + +L G + +A++
Sbjct: 275 VPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADD 334
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVL 552
+ M I + + NI+++ Y G+ +A +++ M K E L YVL
Sbjct: 335 MIKEMRKKGII-PDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVL 393
Query: 553 S 553
S
Sbjct: 394 S 394
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 119/256 (46%), Gaps = 22/256 (8%)
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
E + + D+ ++ +G +P +T++ILI Y G +A ++N M+ G +P
Sbjct: 380 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRC---GNAKKAFDLHNEMLS-KGIEP 435
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+ SL L + +++A+ +F +L G+ +++ ++ H N+
Sbjct: 436 THVTYTSLIYVLSRR------NRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNV- 488
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD---NGIPTPA 369
ER +L KEM + + ++++ +EG VE+A R+L + GI
Sbjct: 489 -ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA-----RMLLDEMKRRGIKPDH 542
Query: 370 FVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
Y + Y + G+ + + EM + ++ Y+ +I+ LCK +E +L E L+KE
Sbjct: 543 ISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE 602
Query: 428 FVETGMKPLMPSYINL 443
V G+ P +Y++L
Sbjct: 603 MVNKGISPDDSTYLSL 618
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 4/218 (1%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
++ V KEG ++ A + ++ +E P ++ + Y+ G + I M+ +
Sbjct: 233 MVNVLCKEGKLKKA-REFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 291
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
Y +I +CK E L + VE G+ P +Y L + Y N G +R
Sbjct: 292 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 351
Query: 457 HLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILS 515
E ++K P+ + Y + + +L G + +A+++ M I + + NI+++
Sbjct: 352 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP-DAITYNILIN 410
Query: 516 AYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLS 553
Y G+ KA +++ M K E L YVLS
Sbjct: 411 GYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLS 448
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 100/240 (41%), Gaps = 6/240 (2%)
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
GL + ++ S +H Y + E + M+ G E S++ KEG +E
Sbjct: 255 GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 314
Query: 350 DAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
+A + +++E G+ A Y ++ Y G+ ++ EM ++ SV Y+
Sbjct: 315 EASGLFDKMVEI--GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 372
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK- 466
++ L + ++KE + G+ P +Y L N Y G + +E L K
Sbjct: 373 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 432
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
P Y + L +++A+++F + DQ + + N ++ + ++G+ +A
Sbjct: 433 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL-DQGVSPDVIMFNAMVDGHCANGNVERA 491
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 131/290 (45%), Gaps = 17/290 (5%)
Query: 188 DYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL 247
D MGK + I +++ N+G + +T++ +I + + + LDEA ++Y +++
Sbjct: 809 DAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKM---LDEAINLYYQLMS- 864
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
G+ P P + L L+ K G ++ AE +F +L G E IY+ I L+ Y
Sbjct: 865 EGFSPTPCTYGPLLDGLL-KDGN-----IEDAEALFDEMLECGCEPNCAIYN--ILLNGY 916
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+ D E++ L + M + G + V+ +G + D + +L +D G+
Sbjct: 917 RIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQL--TDMGLEP 974
Query: 368 PAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
Y + K G ++L ++ +M+++ + ++ Y+ +I L KA + +
Sbjct: 975 DLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMY 1034
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIY 474
+E + G KP + +Y L Y G + A+ + CRPN + Y
Sbjct: 1035 EELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 2/149 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
++A K L+I EM + ++ Y+ II L K++ + +L + + G
Sbjct: 808 LDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGF 867
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEE 492
P +Y L + L G + F E LE C PN IY I L + AG+ EK E
Sbjct: 868 SPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCE 927
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
+F M +Q + + +S +++ + G
Sbjct: 928 LFESM-VEQGMNPDIKSYTVVIDTLCADG 955
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 14/241 (5%)
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
I SGL+ + + E I+L + M + GF +L K+G++EDAE +
Sbjct: 842 IISGLV-----KSKMLDEAINLYYQLMSE-GFSPTPCTYGPLLDGLLKDGNIEDAEALFD 895
Query: 357 RLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
+LE + + Y G+ K E+F M E+ + + +Y +I+ LC
Sbjct: 896 EMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADG 955
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS--ECLEK--CRPNRT 472
S K+ + G++P + +Y L + LG RL A S +EK PN
Sbjct: 956 RLNDGLSYFKQLTDMGLEPDLITYNLLIH---GLGKSGRLEEALSLYNDMEKKGIAPNLY 1012
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDL 532
Y + L AG +A +++ + + + N + N ++ Y SG A Y
Sbjct: 1013 TYNSLILYLGKAGKAAEAGKMYEELLA-KGWKPNVFTYNALIRGYSVSGSPENAFAAYGR 1071
Query: 533 M 533
M
Sbjct: 1072 M 1072
>gi|297800292|ref|XP_002868030.1| hypothetical protein ARALYDRAFT_914908 [Arabidopsis lyrata subsp.
lyrata]
gi|297313866|gb|EFH44289.1| hypothetical protein ARALYDRAFT_914908 [Arabidopsis lyrata subsp.
lyrata]
Length = 463
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 179/464 (38%), Gaps = 67/464 (14%)
Query: 181 ALATKL----ADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
L+T+L D + K RK K + D I G P +T++ LI Y ++E
Sbjct: 10 GLSTRLLNICVDSLCKFRKLEKAETLIIDGIRLGVAPDVVTYNTLISGYCRFVG---IEE 66
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
++ RM + G +P + +NSL G + L + ++F +L G+
Sbjct: 67 GYAVTLRM-RDAGIRPDVATYNSLI------AGAARRLMLDRVLYLFDEMLEWGIYPDLW 119
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA----- 351
Y+ L+ + ++ +E +L K++Q AG G + +L K G +++A
Sbjct: 120 SYNTLMCCY-FKLGKHEEAFRVLYKDLQLAGLSPGPDTYNVLLDALCKCGYIDNALELFK 178
Query: 352 ---------------------------EKTWLRLLESDNGIPTPAFVYK--MEAYAKIGE 382
W+ +G A Y ++ Y K
Sbjct: 179 EMQSKFKPELMTYNILINGLCKSRRVGTAKWMLTELKRSGYTPNAVTYTTILKLYIKTRR 238
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
+ L++F EM+ + AY ++ L K T+ M+E V G + + SY
Sbjct: 239 IRRGLQLFLEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNT 298
Query: 443 LTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQ 501
L N+Y G D + E K + + + I + L G +AEE F M +
Sbjct: 299 LLNLYFKDGNLDAVDDLLGEIERKGMKADEYTHTIIVNGLLRTGQTRRAEEHFVSM-GEM 357
Query: 502 TIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL----------DYV 551
IG+N +CN ++ +G +A + ++ M +K ++ + L +
Sbjct: 358 GIGLNLVTCNCLVDGLCKAGHVDRAMRYFESMEVKDEYTYTSVVHNLCKDMRFVCASKLL 417
Query: 552 LSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHM 595
LS K +K P +S +R L GL + G C K K M
Sbjct: 418 LSCYNKGIKIP-----TSARRAVLSGLRMSG-CYGEARKAKAKM 455
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/323 (19%), Positives = 135/323 (41%), Gaps = 50/323 (15%)
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM----------- 244
FA IF+D+I G P +++L+ A+ G +D A I+ RM
Sbjct: 479 FANAFSIFEDMIKSGLQPDRAIYNLLVEAFCK---MGNMDRAIRIFERMKKERMQPSNRT 535
Query: 245 -----------------------IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF 281
++ G P +N+L L+ K + +++A
Sbjct: 536 FRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRK------HQVERAVS 589
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+ + +G+ + Y+ ++ ++ +I K K ++++G + + ++LR
Sbjct: 590 VLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTK--IKESGLKLDVYIYETLLRA 647
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGS 399
C K G ++ A + S IP F+Y + + +A+ G+ ++ ++ ++M+E
Sbjct: 648 CCKSGRMQSALAVTREM--SFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIP 705
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
++ + I CKA + + E++++E + G+KP + ++ L + + + DR
Sbjct: 706 PNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKC 765
Query: 460 FSECLEK-CRPNRTIYGIYLESL 481
F E +P+ Y + SL
Sbjct: 766 FEEMKSAGLKPDEAAYHCLVTSL 788
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 147/350 (42%), Gaps = 62/350 (17%)
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRAL--VSKP-----GGLSKYYLQQ-----AEFI 282
++AC + R+++ RP ++ A + KP G + YY ++ A
Sbjct: 221 EDACREFRRVLE-----SRPEDWQAVVSAFERIPKPSRREFGLMVVYYAKRGDKHHARAT 275
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
F N+ G+E +++ L+ H+Y D +EM+ G E ++
Sbjct: 276 FENMRARGIEPNAFVFTSLV--HAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIAGY 333
Query: 343 AKEGDVEDAEKTWLRL---LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
K D E A+K + L++ NGI ++ A+ + G ++ E+ REM+E
Sbjct: 334 GKTNDAESADKLFKEAKTKLDNLNGIIYSNIIH---AHCQSGNMDRAEELVREMEEDGID 390
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-------- 451
A + YH ++ A++ + + + E G +P + SY L N+Y+ +G
Sbjct: 391 APIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAV 450
Query: 452 -------------------MHDRLHL-----AFS--ECLEKC--RPNRTIYGIYLESLKN 483
++ +HL AFS E + K +P+R IY + +E+
Sbjct: 451 SKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCK 510
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
GN+++A IF M ++ N R+ I+ + +GD +A DLM
Sbjct: 511 MGNMDRAIRIFERMKKERMQPSN-RTFRPIIEGFAVAGDMKRALDTLDLM 559
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 119/256 (46%), Gaps = 22/256 (8%)
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
E + + D+ ++ +G +P +T++ILI Y G +A ++N M+ G +P
Sbjct: 402 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRC---GNAKKAFDLHNEMLS-KGIEP 457
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+ SL L + +++A+ +F +L G+ +++ ++ H N+
Sbjct: 458 THVTYTSLIYVLSRR------NRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNV- 510
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD---NGIPTPA 369
ER +L KEM + + ++++ +EG VE+A R+L + GI
Sbjct: 511 -ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA-----RMLLDEMKRRGIKPDH 564
Query: 370 FVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
Y + Y + G+ + + EM + ++ Y+ +I+ LCK +E +L E L+KE
Sbjct: 565 ISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE 624
Query: 428 FVETGMKPLMPSYINL 443
V G+ P +Y++L
Sbjct: 625 MVNKGISPDDSTYLSL 640
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 4/218 (1%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
++ V KEG ++ A + ++ +E P ++ + Y+ G + I M+ +
Sbjct: 255 MVNVLCKEGKLKKA-REFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 313
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
Y +I +CK E L + VE G+ P +Y L + Y N G +R
Sbjct: 314 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 373
Query: 457 HLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILS 515
E ++K P+ + Y + + +L G + +A+++ M I + + NI+++
Sbjct: 374 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP-DAITYNILIN 432
Query: 516 AYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLS 553
Y G+ KA +++ M K E L YVLS
Sbjct: 433 GYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLS 470
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 100/240 (41%), Gaps = 6/240 (2%)
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
GL + ++ S +H Y + E + M+ G E S++ KEG +E
Sbjct: 277 GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 336
Query: 350 DAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
+A + +++E G+ A Y ++ Y G+ ++ EM ++ SV Y+
Sbjct: 337 EASGLFDKMVEI--GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 394
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK- 466
++ L + ++KE + G+ P +Y L N Y G + +E L K
Sbjct: 395 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 454
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
P Y + L +++A+++F + DQ + + N ++ + ++G+ +A
Sbjct: 455 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL-DQGVSPDVIMFNAMVDGHCANGNVERA 513
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 155/390 (39%), Gaps = 30/390 (7%)
Query: 269 GGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
G L K L + + I ++T G + I++ LI H+Y + D L K+M G
Sbjct: 343 GCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI--HAYCRSGDYSYAYKLLKKMGDCGC 400
Query: 329 EEGKEVL-LSVLRVCAKEG----DV-EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGE 382
+ G V + + +C E DV E AEK + +L++ + G+
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
F K+ I REM + Y K+I LLC A + + L +E + P + +Y
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520
Query: 443 LTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQ 501
L + + +G+ + F E + + C PN Y + + A + A E+F M S+
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580
Query: 502 TIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKK 561
I N + ++ + SG KA +IY M +A + +D ++ ++
Sbjct: 581 CIP-NVVTYTALIDGHCKSGQIEKACQIYARM------RGNADIPDVDMYFKIDDGNIRD 633
Query: 562 PVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEW 621
P N+ + G L+ GLC K R ++ E + ++ L D + +
Sbjct: 634 P---NIFT------YGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK- 683
Query: 622 LHPSFKFWPKGRLVIPKLIHRWLTPRALAY 651
+ ++V K+ R P Y
Sbjct: 684 ----VGKLDEAQMVFTKMSERGYGPNVYTY 709
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 119/281 (42%), Gaps = 16/281 (5%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K RK + ++F+ ++++G +P+ +T+ LI + + G +++AC IY RM +
Sbjct: 562 KARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS---GQIEKACQIYARM-RGNADI 617
Query: 252 PRPSLHNSLFRALVSKPG---------GLSKYY-LQQAEFIFHNLLTSGLEIQKDIYSGL 301
P ++ + + P GL K + +++A + + G E +Y L
Sbjct: 618 PDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDAL 677
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
I +D+ ++ K M + G+ S++ K+ ++ A K R+LE+
Sbjct: 678 IDGFCKVGKLDEAQMVFTK--MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN 735
Query: 362 DNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
+ ++ K+G+ ++ + M+E+ +V Y +I+ KA + +
Sbjct: 736 SCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKC 795
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
LM++ G P +Y L N G+ D H E
Sbjct: 796 LELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 127/352 (36%), Gaps = 59/352 (16%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG--G 249
++R+ +C+ I +I +G PS F+ LI AY + + Y + ++G G
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRS------GDYSYAYKLLKKMGDCG 399
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
QP ++N L + S L+ AE + +L + +
Sbjct: 400 CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVV----------------- 442
Query: 310 NIDKERISLLKKEMQQAG-FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
++K +S L + + AG FE+ S++R +G + D T
Sbjct: 443 -LNKVNVSNLARCLCGAGKFEKA----YSIIREMMSKGFIPD----------------TS 481
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
+ + + + +F EM+ V Y +I+ CK + E
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEM 541
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNI 487
V G P + +Y L + YL + F L E C PN Y ++ +G I
Sbjct: 542 VRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQI 601
Query: 488 EKAEEIFNHMHSDQTI----------GVNTRSCNIILSAYLSSGDFVKAEKI 529
EKA +I+ M + I N R NI L G KA K+
Sbjct: 602 EKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDG-LCKAHKV 652
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 166/413 (40%), Gaps = 28/413 (6%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D L DY+ K + + R IFD + +G P T+ L+ Y +G L E
Sbjct: 300 DVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGY---ATKGALVEMH 356
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
++ + M++ G P + N L A + + +A +F + GL Y
Sbjct: 357 ALLDLMVR-NGIHPDHHVFNILICAYAKQE------KVDEAMLVFSKMRQHGLNPNVVTY 409
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+I + ++D + ++M G V S++ + AE+ L +
Sbjct: 410 GAVIGILCKSGSVDDAMLYF--EQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELLCKAEE 417
L+ + T F + ++ K G ++S ++F ++ R+G +V Y +I+ C A +
Sbjct: 468 LDRGICLNTIFFNSIIHSHCKEGRVIESEKLF-DLMVRIGVKPNVITYSTLIDGYCLAGK 526
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGI 476
+ L+ GMKP +Y L N Y + D F E + PN Y I
Sbjct: 527 MDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 586
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
L+ L + A+E++ + T + + NIIL + +A +++ +CL
Sbjct: 587 ILQGLFHTRRTAAAKELYVGITKSGT-QLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 645
Query: 537 KYEIES-AWMEKLDYVLSLNRKEVKKPVSLNLSSE-----------QRENLIG 577
++E+ + + +L + R + K + + SS EN+IG
Sbjct: 646 DLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698
>gi|225454795|ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27270-like
[Vitis vinifera]
Length = 1071
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 138/317 (43%), Gaps = 20/317 (6%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
LA+Y + R F+D G + ++ I A L A G L A SIY+RM+
Sbjct: 754 LANYGKHQEAENVIRRSFED----GLELDTVAYNTFINAMLGA---GRLHFANSIYDRMV 806
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD--IYSGLIW 303
LG PS+ + ++S G K L +A +F+ SG+ + D Y+ LI
Sbjct: 807 SLG---VAPSIQT--YNTMISVYGRGRK--LDKAVEMFNKARCSGVGVSLDEKTYTNLI- 858
Query: 304 LHSYQDNIDKER-ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
SY K SLL +EMQ+ G + GK ++ V A G +A++ + +L
Sbjct: 859 --SYYGKAGKSHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDG 916
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+ ++ + AY + +F+++ E MQ S +++++ KA TE E
Sbjct: 917 CSPDSLTYLALIRAYTQSFKFLEAEETIMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAE 976
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLK 482
+ + G+ P + Y + YL+ G ++ F + E P+R I + K
Sbjct: 977 RVYHTLLSAGLSPDVACYRTMLRGYLDYGCVEKGITFFEQIRESVEPDRFIMSSAVHFYK 1036
Query: 483 NAGNIEKAEEIFNHMHS 499
AG +AE I + M S
Sbjct: 1037 LAGKELEAEGILDSMKS 1053
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 14/165 (8%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVP----AYHKIIELLCKAEETELTESLMKEFV 429
+ Y + + K++E+F + R V Y +I KA ++ L +E
Sbjct: 821 ISVYGRGRKLDKAVEMFN--KARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQ 878
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIE 488
E G+KP SY + N+Y G+H F L + C P+ Y + + +
Sbjct: 879 EEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFKFL 938
Query: 489 KAEEIFNHMHSDQTIGVNTRSC---NIILSAYLSSGDFVKAEKIY 530
+AEE M ++ + SC N +LSA+ +G +AE++Y
Sbjct: 939 EAEETIMSMQNEGVL----PSCVHFNQLLSAFAKAGFTEEAERVY 979
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 127/303 (41%), Gaps = 19/303 (6%)
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G + +A ++ +++++LG ++ +L++ G ++ L++A +F + G
Sbjct: 654 EGDISKAQNLNDQLVKLG-----RGAEDASIASLITLYG--KQHKLKKAIEVFSAI--EG 704
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
K IY +I +Y E L +E+ G E G + V+ A G ++
Sbjct: 705 CTSGKLIYISMI--DAYAKCGKAEEAYHLYEEVTGKGIELGVVSISKVVHALANYGKHQE 762
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
AE R E + T A+ + A G + I+ M + S+ Y+ +I
Sbjct: 763 AENVIRRSFEDGLELDTVAYNTFINAMLGAGRLHFANSIYDRMVSLGVAPSIQTYNTMIS 822
Query: 411 LLCKAEETELTESLMKEFVETGMKPLM--PSYINLTNMYLNLGMHDRLHLAFSECLEK-C 467
+ + + + + + +G+ + +Y NL + Y G L F E E+
Sbjct: 823 VYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGI 882
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN--IILSAYLSSGDFVK 525
+P + Y I + AG +A+E+F M D G + S ++ AY S F++
Sbjct: 883 KPGKVSYNIMINVYATAGLHHEAQELFQAMLRD---GCSPDSLTYLALIRAYTQSFKFLE 939
Query: 526 AEK 528
AE+
Sbjct: 940 AEE 942
>gi|297737325|emb|CBI26526.3| unnamed protein product [Vitis vinifera]
Length = 1005
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 138/317 (43%), Gaps = 20/317 (6%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
LA+Y + R F+D G + ++ I A L A G L A SIY+RM+
Sbjct: 688 LANYGKHQEAENVIRRSFED----GLELDTVAYNTFINAMLGA---GRLHFANSIYDRMV 740
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD--IYSGLIW 303
LG PS+ + ++S G K L +A +F+ SG+ + D Y+ LI
Sbjct: 741 SLG---VAPSIQT--YNTMISVYGRGRK--LDKAVEMFNKARCSGVGVSLDEKTYTNLI- 792
Query: 304 LHSYQDNIDKER-ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
SY K SLL +EMQ+ G + GK ++ V A G +A++ + +L
Sbjct: 793 --SYYGKAGKSHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDG 850
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+ ++ + AY + +F+++ E MQ S +++++ KA TE E
Sbjct: 851 CSPDSLTYLALIRAYTQSFKFLEAEETIMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAE 910
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLK 482
+ + G+ P + Y + YL+ G ++ F + E P+R I + K
Sbjct: 911 RVYHTLLSAGLSPDVACYRTMLRGYLDYGCVEKGITFFEQIRESVEPDRFIMSSAVHFYK 970
Query: 483 NAGNIEKAEEIFNHMHS 499
AG +AE I + M S
Sbjct: 971 LAGKELEAEGILDSMKS 987
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 14/165 (8%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVP----AYHKIIELLCKAEETELTESLMKEFV 429
+ Y + + K++E+F + R V Y +I KA ++ L +E
Sbjct: 755 ISVYGRGRKLDKAVEMFN--KARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQ 812
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIE 488
E G+KP SY + N+Y G+H F L + C P+ Y + + +
Sbjct: 813 EEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFKFL 872
Query: 489 KAEEIFNHMHSDQTIGVNTRSC---NIILSAYLSSGDFVKAEKIY 530
+AEE M ++ + SC N +LSA+ +G +AE++Y
Sbjct: 873 EAEETIMSMQNEGVL----PSCVHFNQLLSAFAKAGFTEEAERVY 913
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 8/215 (3%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA 378
L +E+ G E G + V+ A G ++AE R E + T A+ + A
Sbjct: 665 LYEEVTGKGIELGVVSISKVVHALANYGKHQEAENVIRRSFEDGLELDTVAYNTFINAML 724
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM- 437
G + I+ M + S+ Y+ +I + + + + + + +G+ +
Sbjct: 725 GAGRLHFANSIYDRMVSLGVAPSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLD 784
Query: 438 -PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
+Y NL + Y G L F E E+ +P + Y I + AG +A+E+F
Sbjct: 785 EKTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQ 844
Query: 496 HMHSDQTIGVNTRSCN--IILSAYLSSGDFVKAEK 528
M D G + S ++ AY S F++AE+
Sbjct: 845 AMLRD---GCSPDSLTYLALIRAYTQSFKFLEAEE 876
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 142/323 (43%), Gaps = 18/323 (5%)
Query: 162 TGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHIL 221
F ++E M++ + D A+ L + K + I + + + PS F +
Sbjct: 491 NAFAIFEEMLRSG-LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPI 549
Query: 222 IVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF 281
I Y V G + A + +++ G P +N+L LV K + +Q+A
Sbjct: 550 IEGY---AVAGDMKSALDTLD-LMRRSGCVPTVMTYNALIHGLVRK------HKVQRAVS 599
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+ + +G+ + Y+ ++ ++ +I K K ++++G + + ++LR
Sbjct: 600 VLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTK--IKESGLKLDVYIYETLLRA 657
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGS 399
C K G ++ A + S IP F+Y + + +A+ G+ ++ ++ ++M+E
Sbjct: 658 CCKSGRMQSALAVTREM--SFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVP 715
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
++ Y I CKA + + E +++E V+ G+KP + +Y L + + + DR
Sbjct: 716 PNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKC 775
Query: 460 FSEC-LEKCRPNRTIYGIYLESL 481
F E L +P+ Y + SL
Sbjct: 776 FEEMKLAGLKPDEASYHCLVTSL 798
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 138/349 (39%), Gaps = 60/349 (17%)
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRAL--VSKP-----GGLSKYYLQQ-----AEFI 282
DEAC + R+++ RP ++ A + KP G + YY ++ A
Sbjct: 231 DEACREFRRVVE-----SRPDNWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARAT 285
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG--------------- 327
F N+ G+E +++ L+ H+Y D +EM+ G
Sbjct: 286 FENMRARGIEPNAFVFTSLV--HAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGF 343
Query: 328 ------------FEEGKEVLLS--------VLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
F+E K L S ++ + G++E AE+ + E +GI
Sbjct: 344 AKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEE--DGIDA 401
Query: 368 PAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
P VY M Y I K L +F ++E S+ +Y ++ L K + S+
Sbjct: 402 PIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSIS 461
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNA 484
KE G+K +Y L N +++L F E L +P+R IY + +E+
Sbjct: 462 KEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKM 521
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
GN+++A I M ++ N R+ I+ Y +GD A DLM
Sbjct: 522 GNMDRAICILEKMQKERMQPSN-RAFRPIIEGYAVAGDMKSALDTLDLM 569
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 140/339 (41%), Gaps = 18/339 (5%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
KC +F+ + G PS +++ L+ Y+ G + +A SI M G +
Sbjct: 421 KCLVVFERLKECGFKPSIISYGCLLNLYVKI---GKVAKALSISKEMESCGIKH-----N 472
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
N + L++ G + + A IF +L SGL+ + IY+ LI N+D+ I
Sbjct: 473 NKTYSMLIN--GFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRA-IC 529
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--ME 375
+L+K MQ+ + ++ A GD++ A T L L+ +PT Y +
Sbjct: 530 ILEK-MQKERMQPSNRAFRPIIEGYAVAGDMKSALDT-LDLMRRSGCVPT-VMTYNALIH 586
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ + +++ + +M + + Y I+ + + + E+G+K
Sbjct: 587 GLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKL 646
Query: 436 LMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ Y L G M L + +K N IY I ++ G++ +AE++
Sbjct: 647 DVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLM 706
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M D + N + ++A +GD +AEK+ + M
Sbjct: 707 KQMKED-GVPPNIHTYTSYINACCKAGDMQRAEKVIEEM 744
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 25/257 (9%)
Query: 196 FAKCR-DIFDDIINQ----GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
F C+ D D II + G VP +T++ILI Y G + +A ++++ MI G
Sbjct: 342 FLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRC---GNVKKAFTLHDEMIS-KGI 397
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
QP + SL L SK G ++QA+ +F ++ G+ +++ LI H N
Sbjct: 398 QPTRVTYTSLIYVL-SKRG-----RMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGN 451
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE--SDNGIPTP 368
+D R + KEM Q + ++++ +EG VE A + L+E GI
Sbjct: 452 MD--RAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARE----LIEEMKSRGIKPD 505
Query: 369 AFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
Y + Y+K G+ + + EM + ++ Y+ +I+ LCK EE + E L+K
Sbjct: 506 HISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLK 565
Query: 427 EFVETGMKPLMPSYINL 443
E + G+ P +Y++L
Sbjct: 566 EMISKGITPNDNTYLSL 582
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 149/359 (41%), Gaps = 34/359 (9%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQE 395
++ V KEG ++ A K ++ L+E+ GI Y + Y G + IF M+
Sbjct: 197 MINVLCKEGKLKKA-KEFIGLMEA-LGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKC 254
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
R Y I +CK + E ++++ E G++P +Y L + Y N G
Sbjct: 255 RGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKG---N 311
Query: 456 LHLAFS----ECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
L +AF E P + Y + + +L +++A+ I M S++ + ++ + N
Sbjct: 312 LEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEM-SEKGLVPDSVTYN 370
Query: 512 IILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLS----------LNRKEVKK 561
I+++ Y G+ KA ++D M K + L YVLS L K V+K
Sbjct: 371 ILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRK 430
Query: 562 PVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEW 621
+ +L + L+ G C + R M++ E +M V ++ +
Sbjct: 431 GIFPDLI------MFNALIDGHCANGNMDRAFAMLK----EMDQMKVVPDEVTFNTLMQG 480
Query: 622 LHPSFKFWPKGRLVIPKLIHRWLTPRALAYWFMYGGHRTSVGDILLKLKVSSEGIALVF 680
K R +I ++ R + P ++Y + G+ + GD+ +V E +++ F
Sbjct: 481 RCREGKV-EAARELIEEMKSRGIKPDHISYNTLISGY-SKRGDMKDAFRVRDEMLSIGF 537
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 155/390 (39%), Gaps = 30/390 (7%)
Query: 269 GGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
G L K L + + I ++T G + I++ LI H+Y + D L K+M G
Sbjct: 343 GCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI--HAYCRSGDYSYAYKLLKKMGDCGC 400
Query: 329 EEGKEVL-LSVLRVCAKEG----DV-EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGE 382
+ G V + + +C E DV E AEK + +L++ + G+
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
F K+ I REM + Y K+I LLC A + + L +E + P + +Y
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520
Query: 443 LTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQ 501
L + + +G+ + F E + + C PN Y + + A + A E+F M S+
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580
Query: 502 TIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKK 561
I N + ++ + SG KA +IY M +A + +D ++ ++
Sbjct: 581 CIP-NVVTYTALIDGHCKSGQIEKACQIYARM------RGNADIPDVDMYFKIDDGNIRD 633
Query: 562 PVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEW 621
P N+ + G L+ GLC K R ++ E + ++ L D + +
Sbjct: 634 P---NIFT------YGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK- 683
Query: 622 LHPSFKFWPKGRLVIPKLIHRWLTPRALAY 651
+ ++V K+ R P Y
Sbjct: 684 ----VGKLDEAQMVFTKMSERGYGPNVYTY 709
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 119/281 (42%), Gaps = 16/281 (5%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K RK + ++F+ ++++G +P+ +T+ LI + + G +++AC IY RM +
Sbjct: 562 KARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS---GQIEKACQIYARM-RGNADI 617
Query: 252 PRPSLHNSLFRALVSKPG---------GLSKYY-LQQAEFIFHNLLTSGLEIQKDIYSGL 301
P ++ + + P GL K + +++A + + G E +Y L
Sbjct: 618 PDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDAL 677
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
I +D+ ++ K M + G+ S++ K+ ++ A K R+LE+
Sbjct: 678 IDGFCKVGKLDEAQMVFTK--MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN 735
Query: 362 DNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
+ ++ K+G+ ++ + M+E+ +V Y +I+ KA + +
Sbjct: 736 SCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKC 795
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
LM++ G P +Y L N G+ D H E
Sbjct: 796 LELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 127/352 (36%), Gaps = 59/352 (16%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG--G 249
++R+ +C+ I +I +G PS F+ LI AY + + Y + ++G G
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRS------GDYSYAYKLLKKMGDCG 399
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
QP ++N L + S L+ AE + +L + +
Sbjct: 400 CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVV----------------- 442
Query: 310 NIDKERISLLKKEMQQAG-FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
++K +S L + + AG FE+ S++R +G + D T
Sbjct: 443 -LNKVNVSNLARCLCGAGKFEKA----YSIIREMMSKGFIPD----------------TS 481
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
+ + + + +F EM+ V Y +I+ CK + E
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEM 541
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNI 487
V G P + +Y L + YL + F L E C PN Y ++ +G I
Sbjct: 542 VRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQI 601
Query: 488 EKAEEIFNHMHSDQTI----------GVNTRSCNIILSAYLSSGDFVKAEKI 529
EKA +I+ M + I N R NI L G KA K+
Sbjct: 602 EKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDG-LCKAHKV 652
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 142/323 (43%), Gaps = 18/323 (5%)
Query: 162 TGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHIL 221
F ++E M++ + D A+ L + K + I + + + PS F +
Sbjct: 470 NAFAIFEEMLRSG-LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPI 528
Query: 222 IVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF 281
I Y V G + A + +++ G P +N+L LV K + +Q+A
Sbjct: 529 IEGY---AVAGDMKSALDTLD-LMRRSGCVPTVMTYNALIHGLVRK------HKVQRAVS 578
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+ + +G+ + Y+ ++ ++ +I K K ++++G + + ++LR
Sbjct: 579 VLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTK--IKESGLKLDVYIYETLLRA 636
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGS 399
C K G ++ A + S IP F+Y + + +A+ G+ ++ ++ ++M+E
Sbjct: 637 CCKSGRMQSALAVTREM--SFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVP 694
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
++ Y I CKA + + E +++E V+ G+KP + +Y L + + + DR
Sbjct: 695 PNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKC 754
Query: 460 FSEC-LEKCRPNRTIYGIYLESL 481
F E L +P+ Y + SL
Sbjct: 755 FEEMKLAGLKPDEASYHCLVTSL 777
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 140/349 (40%), Gaps = 60/349 (17%)
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRAL--VSKP-----GGLSKYYLQQ-----AEFI 282
DEAC + R+++ RP ++ A + KP G + YY ++ A
Sbjct: 210 DEACREFRRVVE-----SRPDNWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARAT 264
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG--------------- 327
F N+ G+E +++ L+ H+Y D +EM+ G
Sbjct: 265 FENMRARGIEPNAFVFTSLV--HAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGF 322
Query: 328 ------------FEEGKEVLLS--------VLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
F+E K L S ++ + G++E AE+ +R +E D GI
Sbjct: 323 AKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEEL-VREMEED-GIDA 380
Query: 368 PAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
P VY M Y I K L +F ++E S+ +Y ++ L K + S+
Sbjct: 381 PIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSIS 440
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNA 484
KE G+K +Y L N +++L F E L +P+R IY + +E+
Sbjct: 441 KEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKM 500
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
GN+++A I M ++ N R+ I+ Y +GD A DLM
Sbjct: 501 GNMDRAICILEKMQKERMQPSN-RAFRPIIEGYAVAGDMKSALDTLDLM 548
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 140/339 (41%), Gaps = 18/339 (5%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
KC +F+ + G PS +++ L+ Y+ G + +A SI M G +
Sbjct: 400 KCLVVFERLKECGFKPSIISYGCLLNLYVKI---GKVAKALSISKEMESCGIKH-----N 451
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
N + L++ G + + A IF +L SGL+ + IY+ LI N+D+ I
Sbjct: 452 NKTYSMLIN--GFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRA-IC 508
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--ME 375
+L+K MQ+ + ++ A GD++ A T L L+ +PT Y +
Sbjct: 509 ILEK-MQKERMQPSNRAFRPIIEGYAVAGDMKSALDT-LDLMRRSGCVPT-VMTYNALIH 565
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ + +++ + +M + + Y I+ + + + E+G+K
Sbjct: 566 GLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKL 625
Query: 436 LMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ Y L G M L + +K N IY I ++ G++ +AE++
Sbjct: 626 DVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLM 685
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M D + N + ++A +GD +AEK+ + M
Sbjct: 686 KQMKED-GVPPNIHTYTSYINACCKAGDMQRAEKVIEEM 723
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 142/323 (43%), Gaps = 18/323 (5%)
Query: 162 TGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHIL 221
F ++E M++ + D A+ L + K + I + + + PS F +
Sbjct: 496 NAFAIFEEMLRSG-LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPI 554
Query: 222 IVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF 281
I Y V G + A + +++ G P +N+L LV K + +Q+A
Sbjct: 555 IEGY---AVAGDMKSALDTLD-LMRRSGCVPTVMTYNALIHGLVRK------HKVQRAVS 604
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+ + +G+ + Y+ ++ ++ +I K K ++++G + + ++LR
Sbjct: 605 VLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTK--IKESGLKLDVYIYETLLRA 662
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGS 399
C K G ++ A + S IP F+Y + + +A+ G+ ++ ++ ++M+E
Sbjct: 663 CCKSGRMQSALAVTREM--SFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVP 720
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
++ Y I CKA + + E +++E V+ G+KP + +Y L + + + DR
Sbjct: 721 PNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKC 780
Query: 460 FSEC-LEKCRPNRTIYGIYLESL 481
F E L +P+ Y + SL
Sbjct: 781 FEEMKLAGLKPDEASYHCLVTSL 803
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 128/293 (43%), Gaps = 24/293 (8%)
Query: 260 LFRALVSKP-----GGLSKYYLQQ-----AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
LF+ L+ +P G + YY ++ A F N+ G+E +++ L+ H+Y
Sbjct: 287 LFKKLLHEPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLV--HAYAV 344
Query: 310 NIDKERISLLKKEMQQAGFE---EGKEVLLS---VLRVCAKEGDVEDAEKTWLRLLESDN 363
D +EM+ G E +L+S + + G++E AE+ +R +E D
Sbjct: 345 ARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEEL-VREMEED- 402
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
GI P VY M Y I K L +F ++E S+ +Y ++ L K +
Sbjct: 403 GIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKA 462
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLES 480
S+ KE G+K +Y L N +++L F E L +P+R IY + +E+
Sbjct: 463 LSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEA 522
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
GN+++A I M ++ N R+ I+ Y +GD A DLM
Sbjct: 523 FCKMGNMDRAICILEKMQKERMQPSN-RAFRPIIEGYAVAGDMKSALDTLDLM 574
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 140/339 (41%), Gaps = 18/339 (5%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
KC +F+ + G PS +++ L+ Y+ G + +A SI M G +
Sbjct: 426 KCLVVFERLKECGFKPSIISYGCLLNLYVKI---GKVAKALSISKEMESCGIKH-----N 477
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
N + L++ G + + A IF +L SGL+ + IY+ LI N+D+ I
Sbjct: 478 NKTYSMLIN--GFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRA-IC 534
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--ME 375
+L+K MQ+ + ++ A GD++ A T L L+ +PT Y +
Sbjct: 535 ILEK-MQKERMQPSNRAFRPIIEGYAVAGDMKSALDT-LDLMRRSGCVPT-VMTYNALIH 591
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ + +++ + +M + + Y I+ + + + E+G+K
Sbjct: 592 GLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKL 651
Query: 436 LMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ Y L G M L + +K N IY I ++ G++ +AE++
Sbjct: 652 DVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLM 711
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M D + N + ++A +GD +AEK+ + M
Sbjct: 712 KQMKED-GVPPNIHTYTSYINACCKAGDMQRAEKVIEEM 749
>gi|356528730|ref|XP_003532952.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Glycine max]
Length = 963
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 147/354 (41%), Gaps = 34/354 (9%)
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
G + A+ + + +G P TF+I + Y A G A Y R I+ G
Sbjct: 317 GSQGDLAEAEALLGMMEEKGVAPDTKTFNIFLSLYAEARDIGA---AVLCYKR-IREAGL 372
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
P + +L L K +++ E + + + + + + G++ ++ + +
Sbjct: 373 CPDEVTYRALLGVLCRKN------MVREVEDLIDEMERAFVSVDEHCVPGIVEMYVGEGD 426
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR----------LLE 360
+DK LLKK Q E + +++ V A++G E+AE + R +LE
Sbjct: 427 VDK-AFDLLKK--FQVNGEMSSNIRSAIMDVFAEKGLWEEAEDVFYRGRNLAGRKRDVLE 483
Query: 361 SDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
+ ++AY K + K++ +F+ M+ + Y+ ++++L A+ +
Sbjct: 484 CN---------VMIKAYGKAKLYDKAISLFKGMKNHGTWPNESTYNSLVQMLSGADLVDQ 534
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLE 479
L+ E E G KP ++ + Y LG F E + +PN +YG +
Sbjct: 535 AMDLVDEMQEVGFKPPCQTFSAVIGCYARLGQLSDAVSVFKEMVRTGVKPNEVVYGSLIN 594
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G++E+A + F HM + + N +L +Y G+ A+ IY+ M
Sbjct: 595 GFAEHGSLEEALKYF-HMMEESGLSSNLVVLTSLLKSYCKVGNLEGAKAIYERM 647
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 150/340 (44%), Gaps = 24/340 (7%)
Query: 205 DIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL 264
D++ + +V EM+ +I +G +EA ++ R L G + N + +A
Sbjct: 432 DLLKKFQVNGEMSSNIRSAIMDVFAEKGLWEEAEDVFYRGRNLAGRKRDVLECNVMIKAY 491
Query: 265 VSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQ 324
G +K Y +A +F + G + Y+ L+ + S D +D+ L EMQ
Sbjct: 492 -----GKAKLY-DKAISLFKGMKNHGTWPNESTYNSLVQMLSGADLVDQAMD--LVDEMQ 543
Query: 325 QAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGE 382
+ GF+ + +V+ A+ G + DA + ++ + G+ VY + +A+ G
Sbjct: 544 EVGFKPPCQTFSAVIGCYARLGQLSDAVSVFKEMVRT--GVKPNEVVYGSLINGFAEHGS 601
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF--VETGMKPLMPSY 440
++L+ F M+E S+++ +++ CK E +++ + +E G+ + +
Sbjct: 602 LEEALKYFHMMEESGLSSNLVVLTSLLKSYCKVGNLEGAKAIYERMKNMEGGLDLVACN- 660
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
++ ++ +LG+ LAF E R + Y + K G I++A EI M
Sbjct: 661 -SMIGLFADLGLVSEAKLAFENLREMGRADAISYATIMYLYKGVGLIDEAIEIAEEMKLS 719
Query: 501 QTIGVNTRSC---NIILSAYLSSGDFVK-AEKIYDLMCLK 536
+ R C N +L Y ++G F + E I++++ K
Sbjct: 720 GLL----RDCVSYNKVLVCYAANGQFYECGELIHEMISQK 755
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 152/380 (40%), Gaps = 60/380 (15%)
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
GK + + K +F + N G P+E T++ L+ A + +D+A + + M ++G
Sbjct: 492 GKAKLYDKAISLFKGMKNHGTWPNESTYNSLVQMLSGADL---VDQAMDLVDEMQEVGFK 548
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
P + F A++ L + L A +F ++ +G++ + +Y LI + + ++
Sbjct: 549 PPCQT-----FSAVIGCYARLGQ--LSDAVSVFKEMVRTGVKPNEVVYGSLI--NGFAEH 599
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
E M+++G VL S+L+ K G++E A+ + R+ + G+ A
Sbjct: 600 GSLEEALKYFHMMEESGLSSNLVVLTSLLKSYCKVGNLEGAKAIYERMKNMEGGLDLVAC 659
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
+ +A +G ++ F ++E +G A +Y I+ L + + +E
Sbjct: 660 NSMIGLFADLGLVSEAKLAFENLRE-MGRADAISYATIMYLYKGVGLIDEAIEIAEEMKL 718
Query: 431 TGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE--------KCRPNRTIYGIYLESLK 482
+G+ SY + Y G F EC E K PN + + LK
Sbjct: 719 SGLLRDCVSYNKVLVCYAANGQ-------FYECGELIHEMISQKLLPNDGTFKVLFTILK 771
Query: 483 NAGNIEKA----------------EEIFNHMHS----------------DQTIGVNTRSC 510
G +A + F ++S + + +++ +
Sbjct: 772 KGGIPTEAVAQLESSYQEGKPYARQTTFTALYSLVGMHNLALESAQTFIESEVDLDSSAF 831
Query: 511 NIILSAYLSSGDFVKAEKIY 530
N+ + AY S+GD KA IY
Sbjct: 832 NVAIYAYGSAGDINKALNIY 851
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 142/323 (43%), Gaps = 18/323 (5%)
Query: 162 TGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHIL 221
F ++E M++ + D A+ L + K + I + + + PS F +
Sbjct: 492 NAFAIFEEMLRSG-LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPI 550
Query: 222 IVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF 281
I Y V G + A + +++ G P +N+L LV K + +Q+A
Sbjct: 551 IEGY---AVAGDMKSALDTLD-LMRRSGCVPTVMTYNALIHGLVRK------HKVQRAVS 600
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+ + +G+ + Y+ ++ ++ +I K K ++++G + + ++LR
Sbjct: 601 VLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTK--IKESGLKLDVYIYETLLRA 658
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGS 399
C K G ++ A + S IP F+Y + + +A+ G+ ++ ++ ++M+E
Sbjct: 659 CCKSGRMQSALAVTREM--SFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVP 716
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
++ Y I CKA + + E +++E V+ G+KP + +Y L + + + DR
Sbjct: 717 PNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKC 776
Query: 460 FSEC-LEKCRPNRTIYGIYLESL 481
F E L +P+ Y + SL
Sbjct: 777 FEEMKLAGLKPDEASYHCLVTSL 799
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 140/349 (40%), Gaps = 60/349 (17%)
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRAL--VSKP-----GGLSKYYLQQ-----AEFI 282
DEAC + R+++ RP ++ A + KP G + YY ++ A
Sbjct: 232 DEACREFRRVVE-----SRPDNWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARAT 286
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG--------------- 327
F N+ G+E +++ L+ H+Y D +EM+ G
Sbjct: 287 FENMRARGIEPNAFVFTSLV--HAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGF 344
Query: 328 ------------FEEGKEVLLS--------VLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
F+E K L S ++ + G++E AE+ +R +E D GI
Sbjct: 345 AKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEEL-VREMEED-GIDA 402
Query: 368 PAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
P VY M Y I K L +F ++E S+ +Y ++ L K + S+
Sbjct: 403 PIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSIS 462
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNA 484
KE G+K +Y L N +++L F E L +P+R IY + +E+
Sbjct: 463 KEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKM 522
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
GN+++A I M ++ N R+ I+ Y +GD A DLM
Sbjct: 523 GNMDRAICILEKMQKERMQPSN-RAFRPIIEGYAVAGDMKSALDTLDLM 570
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 140/339 (41%), Gaps = 18/339 (5%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
KC +F+ + G PS +++ L+ Y+ G + +A SI M G +
Sbjct: 422 KCLVVFERLKECGFKPSIISYGCLLNLYVKI---GKVAKALSISKEMESCGIKH-----N 473
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
N + L++ G + + A IF +L SGL+ + IY+ LI N+D+ I
Sbjct: 474 NKTYSMLIN--GFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRA-IC 530
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--ME 375
+L+K MQ+ + ++ A GD++ A T L L+ +PT Y +
Sbjct: 531 ILEK-MQKERMQPSNRAFRPIIEGYAVAGDMKSALDT-LDLMRRSGCVPT-VMTYNALIH 587
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ + +++ + +M + + Y I+ + + + E+G+K
Sbjct: 588 GLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKL 647
Query: 436 LMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ Y L G M L + +K N IY I ++ G++ +AE++
Sbjct: 648 DVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLM 707
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M D + N + ++A +GD +AEK+ + M
Sbjct: 708 KQMKED-GVPPNIHTYTSYINACCKAGDMQRAEKVIEEM 745
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/440 (20%), Positives = 176/440 (40%), Gaps = 46/440 (10%)
Query: 129 GTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLAD 188
G++ R L+ K L D + + + + R++++M +Q W + + + T +
Sbjct: 85 GSIARCLDPFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIT 144
Query: 189 YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY------------LSAPVQGCLDE 236
+G+E KCR++FD++ + G + + +I AY L+ Q +
Sbjct: 145 LLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSP 204
Query: 237 ACSIYNRMIQ------------LG--------GYQPRPSLHNSLFRALVSKPGGLSKYYL 276
+ YN +I LG G QP +N+L A + G
Sbjct: 205 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLG------ 258
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
+AE +F + SG+ + YS L+ + + E++S L +EM+ G
Sbjct: 259 DEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRL--EKVSELLREMESGGNLPDITSYN 316
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
+L A+ G +++A + ++ + + + Y K G + +IF EM+
Sbjct: 317 VLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVS 376
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
Y+ +I++ + + +L + VE ++P M +Y L G+++
Sbjct: 377 NTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDA 436
Query: 457 HLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN--TRSCNII 513
EK P+ Y +E+ A E+A +FN M+ +G N + N
Sbjct: 437 KKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNE---VGSNPTVETYNSF 493
Query: 514 LSAYLSSGDFVKAEKIYDLM 533
+ A+ G + +AE I M
Sbjct: 494 IHAFARGGLYKEAEAILSRM 513
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 140/323 (43%), Gaps = 15/323 (4%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D + L GK + K ++ ++ + G +P ++++L+ AY G + EA
Sbjct: 276 DINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAEL---GSIKEAM 332
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
++ R +Q G + ++ L L K G +Y IF + S + Y
Sbjct: 333 DVF-RQMQAAGCVANAATYSVLLN-LYGKHG---RY--DDVRDIFLEMKVSNTDPDAGTY 385
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+ LI + + KE ++L +M + E E ++ C K G EDA+K L +
Sbjct: 386 NILIQVFG-EGGYFKEVVTLFH-DMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHM 443
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
E + A+ +EA+ + + ++L +F M E + +V Y+ I +
Sbjct: 444 NEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLY 503
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGI 476
+ E+++ E+G+K + S+ + + G ++ ++ E +EK C PN +
Sbjct: 504 KEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVE-MEKANCEPNELTLEV 562
Query: 477 YLESLKNAGNIEKAEEIFNHMHS 499
L +AG ++++EE F + +
Sbjct: 563 VLSVYCSAGLVDESEEQFQEIKA 585
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/408 (20%), Positives = 173/408 (42%), Gaps = 38/408 (9%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
C + E E RV++ +++ R + A + D + K +F + ++++ ++ P
Sbjct: 238 CFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQP 297
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS- 272
+T+ ILI + G +D A +Y+ +I+ G +++NSL + + G +
Sbjct: 298 DVITYGILIHGLCRS---GDVDGAARVYSEIIKTG-LVIDAAMYNSLVKGFC-QAGRVQE 352
Query: 273 --KYYLQQAEFIFHNLLTSGLEIQKDIYSGLI------WLHSYQDNI---DKERISLLKK 321
K++ NL T + I+ SG++ W +D D L
Sbjct: 353 AWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIH 412
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDV----------------EDAEKTWLRLLESDNGI 365
+ Q GF + RV K+ DV DA K + ++ +G
Sbjct: 413 GLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM--DKDGC 470
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
+ +Y + + ++ ++ I+ +M + S +V Y+ +I+ LCKAE+ + S
Sbjct: 471 KPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASS 530
Query: 424 LMKEFVETGMKPLMPSYINLT-NMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLK 482
+ +E VE G P + +Y +L ++ + + D L + + + + ++ I + L
Sbjct: 531 VAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLC 590
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+AG +++A +F+ M + N + N ++ +G KA ++
Sbjct: 591 SAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLW 638
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 122/285 (42%), Gaps = 17/285 (5%)
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P +N + R+L ++ L +A +F +L + + YS L+ + QD +
Sbjct: 156 PNLQTYNIVLRSLCARGD------LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRL 209
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA-F 370
D + LL EM ++ + ++L C K G+ E + W +L++ P A +
Sbjct: 210 DHA-LDLLD-EMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
++ K G F + E++ M V Y +I LC++ + + + E ++
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327
Query: 431 TGMKPLMPSYINLTNMYLNLGMHDRLHLAF----SECLEKCRPNRTIYGIYLESLKNAGN 486
TG+ Y +L + G R+ A+ S R RT Y I ++ L ++G
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAG---RVQEAWKFWDSAGFAGLRNLRT-YNIMIKGLFDSGM 383
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
+++A E+++ + D +T + ++ +G KA I++
Sbjct: 384 VDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 13/275 (4%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E GFR+ + +M++ D + L D + KE + +F ++ ++G VP+++TF
Sbjct: 284 EEGFRL-KMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTT 342
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
LI G +D A IY +M G + L+N+L L GG Y ++A
Sbjct: 343 LINGQCK---NGRVDLALEIYQQMFT-KGLKADLVLYNTLIDGLCK--GG----YFREAR 392
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ GL K Y+ L L D E ++KEM + G + +++
Sbjct: 393 KFVGEMTKRGLIPDKFTYTTL--LDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIIS 450
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
++G + DAE+T +L + + M+ + K G+ ++ +EMQ
Sbjct: 451 GLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIP 510
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
V Y+ ++ LCK + + + L+ + G+ P
Sbjct: 511 GVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVP 545
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 8/207 (3%)
Query: 334 VLLSVLRVCAKEGDVEDAEKTWLRLLESDN-GIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
V +++ V + G V DA + + RL + N IP +E K+ M +LE + E
Sbjct: 164 VFDALMSVYTEFGYVSDAIQCF-RLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLE 222
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL---N 449
+ + +V ++ ++ LCK + + + + E +TG++P S+ L N Y N
Sbjct: 223 ILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGN 282
Query: 450 LGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
L RL + E + P+ Y ++ L +E A +F M D+ + N +
Sbjct: 283 LEEGFRLKMVMEEF--RVFPDVFTYSALIDGLCKECQLEDANHLFKEM-CDRGLVPNDVT 339
Query: 510 CNIILSAYLSSGDFVKAEKIYDLMCLK 536
+++ +G A +IY M K
Sbjct: 340 FTTLINGQCKNGRVDLALEIYQQMFTK 366
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 141/318 (44%), Gaps = 18/318 (5%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T+L +GK + + D++ +++ G P + + L+ G L+E +++N
Sbjct: 307 TELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKV---GRLEELTNVFNE 363
Query: 244 MIQLGGYQPRPSL--HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
M G ++ P++ +N++ +AL SK + + F + G+ + YS L
Sbjct: 364 M---GTWRCTPTVVSYNTVIKALFE-----SKAPVSEVSSWFDKMKADGVSPSEFTYSIL 415
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
I + + + E+ LL +EM + GF S++ K E A + + L E+
Sbjct: 416 IDGYCKTNRV--EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKEN 473
Query: 362 DNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
+ + + ++ + K G+ +++++F EM+ + V AY+ ++ + KA
Sbjct: 474 FGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEA 533
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLE 479
SL+++ E G + S+ + N + G+ R F E ++ C +P+ Y L
Sbjct: 534 NSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMF-ETMKHCGIKPDGVTYNTLLG 592
Query: 480 SLKNAGNIEKAEEIFNHM 497
+AG E+A + M
Sbjct: 593 CFAHAGMFEEAARLMREM 610
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
Y K+G+ K+L++F EM+ S +V Y ++I+ L KA E L K + G+ P
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPD 337
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESL-KNAGNIEKAEEIF 494
+ NL N+ +G + L F+E +C P Y +++L ++ + + F
Sbjct: 338 VVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWF 397
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
+ M +D + + + +I++ Y + KA
Sbjct: 398 DKMKAD-GVSPSEFTYSILIDGYCKTNRVEKA 428
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 163/378 (43%), Gaps = 28/378 (7%)
Query: 165 RVYEWM--MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
R +E+ M+ + + + + L D KE +F D+ G +P+E T+ LI
Sbjct: 377 RAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLI 436
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEF 281
A A G L EA + N M+Q G L+ + AL+ GL K + +AE
Sbjct: 437 DANCKA---GNLTEAWKLLNDMLQAG-----VKLNIVTYTALLD---GLCKAGRMIEAEE 485
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+F ++L G+ + +Y+ L+ H Y I ER+ K ++Q K L+ +
Sbjct: 486 VFRSMLKDGISPNQQVYTALV--HGY---IKAERMEDAMKILKQMTECNIKPDLILYGSI 540
Query: 342 CAKEGDVEDAEKTWLRLLE-SDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLG 398
E+T L L E GI + ++AY K G+ +L F+EMQ+
Sbjct: 541 IWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGV 600
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
A++ Y +I+ LCKA EL + G++P + Y +L + +
Sbjct: 601 EATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKK 660
Query: 459 AFSECLEKCR---PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILS 515
F E +CR P+ T + ++ GN+++A + + M ++ I + ++S
Sbjct: 661 LFDE--MQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRM-TELAIEFDLHVYTSLVS 717
Query: 516 AYLSSGDFVKAEKIYDLM 533
+ G+ +A K ++ M
Sbjct: 718 GFSQCGELHQARKFFNEM 735
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 141/327 (43%), Gaps = 22/327 (6%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
R F+D+I G PS T++++I YL +G L+ + ++ +M ++ G P +NS
Sbjct: 274 RKFFNDMIGAGIAPSVFTYNVMI-DYLCK--EGDLENSRRLFVQMREM-GLSPDVVTYNS 329
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
L K G L++ +F+ + G Y+GLI + Y R
Sbjct: 330 LIDGY-GKVGS-----LEEVASLFNEMKDVGCVPDIITYNGLI--NCYCKFEKMPRAFEY 381
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAY 377
EM+ G + +++ KEG ++ A K ++ + + G+ F Y ++A
Sbjct: 382 FSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRT--GLLPNEFTYTSLIDAN 439
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
K G ++ ++ +M + ++ Y +++ LCKA E + + ++ G+ P
Sbjct: 440 CKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQ 499
Query: 438 PSYINLTNMYLNL-GMHDRLHL--AFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
Y L + Y+ M D + + +EC +P+ +YG + + +E+ + I
Sbjct: 500 QVYTALVHGYIKAERMEDAMKILKQMTEC--NIKPDLILYGSIIWGHCSQRKLEETKLIL 557
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSG 521
M S + I N I+ AY +G
Sbjct: 558 EEMKS-RGISANPVISTTIIDAYFKAG 583
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 86/194 (44%), Gaps = 6/194 (3%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSA 400
KEGD+E++ + ++++ E G+ Y ++ Y K+G + +F EM++
Sbjct: 300 CKEGDLENSRRLFVQMREM--GLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVP 357
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLA 459
+ Y+ +I CK E+ E G+KP + +Y L + + G M + L
Sbjct: 358 DIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLF 417
Query: 460 FSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
PN Y +++ AGN+ +A ++ N M + +N + +L
Sbjct: 418 VDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML-QAGVKLNIVTYTALLDGLCK 476
Query: 520 SGDFVKAEKIYDLM 533
+G ++AE+++ M
Sbjct: 477 AGRMIEAEEVFRSM 490
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 155/388 (39%), Gaps = 51/388 (13%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ + + K +K + D+ +G P +T++ LI AY QG L+EA + + M
Sbjct: 364 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR---QGLLEEAFELMDSM- 419
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
G +P +N++ L K G KY +A+ + +L G+ Y+ L+
Sbjct: 420 SGKGLKPCVFTYNAIINGLC-KTG---KYL--RAKGVLDEMLKIGMSPDTATYNILLVEC 473
Query: 306 SYQDNI-DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
DN+ D ERI EM G +++ + +K G ++ A K + + +
Sbjct: 474 CRNDNMMDAERIF---DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 530
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
+ + + + G ++L++ EM E+ V Y+ I+ LCK + + L
Sbjct: 531 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADEL 590
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK----------------CR 468
E E G+ P ++ L N Y G ++ F +++ C+
Sbjct: 591 FTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 650
Query: 469 --------------------PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTR 508
PN YGI + N G + +A +++ M ++
Sbjct: 651 GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM-VEKGFEATII 709
Query: 509 SCNIILSAYLSSGDFVKAEKIYDLMCLK 536
+CN I+ Y +G+ VKA++ M LK
Sbjct: 710 TCNTIVKGYCRAGNAVKADEFLSNMLLK 737
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 98/232 (42%), Gaps = 22/232 (9%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
MM Q + D L D K + K ++++D+I++ P+ +++ ILI Y +
Sbjct: 628 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCN-- 685
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ-----QAEFIFH 284
GC+ EA +++ M++ G F A + + K Y + +A+
Sbjct: 686 -MGCVSEAFRLWDEMVEKG------------FEATIITCNTIVKGYCRAGNAVKADEFLS 732
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
N+L G+ Y+ LI ++N+D R L +M+ +G +L ++
Sbjct: 733 NMLLKGIVPDGITYNTLINGFIKEENMD--RAFALVNKMENSGLLPDVITYNVILNGFSR 790
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
+G +++AE L+++E + + + ++ + EM +R
Sbjct: 791 QGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 842
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 6/163 (3%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ K+G + EI++E+ +V + +I LCK ++ E T+S + + E G+
Sbjct: 330 LGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGV 389
Query: 434 KPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
P + +Y L N Y G + + L S + +P Y + L G +A+
Sbjct: 390 FPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKG 449
Query: 493 IFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ + M IG+ +T + NI+L + + + AE+I+D M
Sbjct: 450 VLDEMLK---IGMSPDTATYNILLVECCRNDNMMDAERIFDEM 489
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 119/252 (47%), Gaps = 17/252 (6%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ G VP TF+ LI AY G +A ++Y RM++ G P S +N++
Sbjct: 485 VFKEMKRAGFVPERDTFNTLISAYSRC---GSFQQAMAVYKRMLE-AGVTPDLSSYNAVL 540
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
AL GGL +Q+E +F + + + Y L LH+Y ++ + ER+ L +
Sbjct: 541 AALAR--GGL----WEQSEKVFAEMKDGRCKPNELTYCSL--LHAYANSKEIERMHTLAE 592
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDV-EDAEKTWLRLLESDNGIPTPAFVYKMEA-YAK 379
E+ +G E VLL L + + D+ + E + L G P + + M A Y +
Sbjct: 593 EIY-SGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEEL--KKKGSPDLSTLNAMIAIYGR 649
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
K+ EI M E S S+ Y+ ++ + ++E E +E ++KE + G+KP + S
Sbjct: 650 RQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLIS 709
Query: 440 YINLTNMYLNLG 451
Y + Y G
Sbjct: 710 YNTVIFAYCRNG 721
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 89/424 (20%), Positives = 178/424 (41%), Gaps = 55/424 (12%)
Query: 145 EDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDI 202
+D TY L C R E +V+E M + + D L D GK R+ + ++
Sbjct: 287 DDYTYNTLISCCRRGSLYEEAAQVFEEM-KLSGFSPDKVTFNTLLDVYGKSRRPKEAMEV 345
Query: 203 FDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFR 262
++ G PS +T++ LI AY G L EA + ++M++ G +P + +L
Sbjct: 346 LKEMEFSGFSPSIVTYNSLISAYAR---DGLLREAMELKDQMVE-KGIKPDVFTYTTLLS 401
Query: 263 ALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY--------------- 307
+ G+ + A IF + +G + ++ LI +H
Sbjct: 402 GF--EKAGMD----EPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIE 455
Query: 308 -------------------QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
Q+ +D E +S + KEM++AGF ++ +++ ++ G
Sbjct: 456 ICNCAPDIVTWNTLLAVFGQNGMDSE-VSGVFKEMKRAGFVPERDTFNTLISAYSRCGSF 514
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
+ A + R+LE+ ++ + A A+ G + +S ++F EM++ + Y +
Sbjct: 515 QQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSL 574
Query: 409 IELLCKAEETELTESLMKEFVETGMK---PLMPSYINLTNMYLNLGMHDRLHLAFSECLE 465
+ ++E E +L +E + +G+ P++ + L N +L M H AF E +
Sbjct: 575 LHAYANSKEIERMHTLAEE-IYSGLTEPVPVLLKTLVLVNSKCDLLMETE-H-AFEELKK 631
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
K P+ + + + KA EI N M+ + + + N ++ + S +F +
Sbjct: 632 KGSPDLSTLNAMIAIYGRRQMVAKANEILNFMN-ESGFSPSLATYNSLMYMHSRSENFER 690
Query: 526 AEKI 529
+E++
Sbjct: 691 SEEV 694
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/379 (19%), Positives = 152/379 (40%), Gaps = 15/379 (3%)
Query: 158 RENETGFRVYEWMMQQHWYR--FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
++ + V+ W+ ++ + + ++ + +GKE K + I +++ G
Sbjct: 158 KKCDMAMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDV 217
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+ LI AY S G +A ++ +M + G +P+L + +++ G + +
Sbjct: 218 YAYTSLITAYAS---NGRYRDAVLVFKKMEEEGC---KPTLIT--YNVILNVYGKMGMPW 269
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+ + + H + +SG+ Y+ LI + E + + +EM+ +GF K
Sbjct: 270 SKISGLV-HGMKSSGVAPDDYTYNTLI--SCCRRGSLYEEAAQVFEEMKLSGFSPDKVTF 326
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
++L V K ++A + + S + + AYA+ G +++E+ +M E
Sbjct: 327 NTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVE 386
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
+ V Y ++ KA E + E G KP + ++ L M+ N G
Sbjct: 387 KGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAE 446
Query: 456 LHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
+ F E + C P+ + L G + +F M + + N ++
Sbjct: 447 MMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERDTFNTLI 505
Query: 515 SAYLSSGDFVKAEKIYDLM 533
SAY G F +A +Y M
Sbjct: 506 SAYSRCGSFQQAMAVYKRM 524
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/408 (20%), Positives = 173/408 (42%), Gaps = 38/408 (9%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
C + E E RV++ +++ R + A + D + K +F + ++++ ++ P
Sbjct: 238 CFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQP 297
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS- 272
+T+ ILI + G +D A +Y+ +I+ G +++NSL + + G +
Sbjct: 298 DVITYGILIHGLCRS---GDVDGAARVYSEIIKTG-LVIDAAMYNSLVKGFC-QAGRVQE 352
Query: 273 --KYYLQQAEFIFHNLLTSGLEIQKDIYSGLI------WLHSYQDNI---DKERISLLKK 321
K++ NL T + I+ SG++ W +D D L
Sbjct: 353 AWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIH 412
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDV----------------EDAEKTWLRLLESDNGI 365
+ Q GF + RV K+ DV DA K + ++ +G
Sbjct: 413 GLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM--DKDGC 470
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
+ +Y + + ++ ++ I+ +M + S +V Y+ +I+ LCKAE+ + S
Sbjct: 471 KPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASS 530
Query: 424 LMKEFVETGMKPLMPSYINLT-NMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLK 482
+ +E VE G P + +Y +L ++ + + D L + + + + ++ I + L
Sbjct: 531 VAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLC 590
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+AG +++A +F+ M + N + N ++ +G KA ++
Sbjct: 591 SAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLW 638
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 122/285 (42%), Gaps = 17/285 (5%)
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P +N + R+L ++ L +A +F +L + YS L+ + QD +
Sbjct: 156 PNLQTYNIVLRSLCARGD------LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRL 209
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA-F 370
D + LL EM ++G + ++L C K G+ E + W +L++ P A +
Sbjct: 210 DHA-LDLLD-EMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
++ K G F + E++ M V Y +I LC++ + + + E ++
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327
Query: 431 TGMKPLMPSYINLTNMYLNLGMHDRLHLAF----SECLEKCRPNRTIYGIYLESLKNAGN 486
TG+ Y +L + G R+ A+ S R RT Y I ++ L ++G
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAG---RVQEAWKFWDSAGFAGLRNLRT-YNIMIKGLFDSGM 383
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
+++A E+++ + D +T + ++ +G KA I++
Sbjct: 384 VDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 142/317 (44%), Gaps = 21/317 (6%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA-PVQGCLDEACSIYNRM 244
L + + K+ K AK + + +++ G VP+ ++ LI Y +QG A SI+
Sbjct: 341 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQG----AFSIFE-- 394
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
Q+ RP + + AL++ GL K + +AE + + SG++ + ++ LI
Sbjct: 395 -QMKSRHIRPD--HITYNALIN---GLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLID 448
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ ++K L +MQ G + SV++ K G + +A ++ D
Sbjct: 449 AYGRAGQLEKCFTVL--SDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKD- 505
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
+ A VY ++AY + G ++ + +M+ SAS+ Y+ +++ LCK + +
Sbjct: 506 -VVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEA 564
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLES 480
E L+ G++P + SY + + N G DR E + RP Y L +
Sbjct: 565 EELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSA 624
Query: 481 LKNAGNIEKAEEIFNHM 497
L +AG + E ++ HM
Sbjct: 625 LGSAGRVHDMECLYQHM 641
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 4/199 (2%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA--KIGEFMKSLEIFREMQE 395
++ C GD+++A R+ S+ P AF Y + + G+ +L++F EM +
Sbjct: 164 AVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVD 223
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
R + + Y+ +I+ K + E L + ++ G KP + +Y L + G D
Sbjct: 224 RGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDE 283
Query: 456 LHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
E P+ Y I + L G+ +F I + +C+I+L
Sbjct: 284 TRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVI-IGAYTCSILL 342
Query: 515 SAYLSSGDFVKAEKIYDLM 533
+ G KAE++ +++
Sbjct: 343 NGLCKDGKVAKAEQVLEML 361
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 126/290 (43%), Gaps = 18/290 (6%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
T + +C ++R+ + F ++E M +H R D L + + K + D+ ++
Sbjct: 375 TLINGYC-QVRDLQGAFSIFEQMKSRHI-RPDHITYNALINGLCKMEMITEAEDLVMEME 432
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
G PS TF+ LI AY A G L++ ++ + M Q G + S+ +A K
Sbjct: 433 KSGVDPSVETFNTLIDAYGRA---GQLEKCFTVLSDM-QDKGIKSNVISFGSVVKAFC-K 487
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
G + +A I +++ + +Y+ +I +Y ++ E+ LL ++M+ +G
Sbjct: 488 NG-----KIPEAVAILDDMIHKDVVPNAQVYNSII--DAYIESGGTEQAFLLVEKMKSSG 540
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMK 385
+L+ K +++AE+ L ++ G+ Y + A G+ +
Sbjct: 541 VSASIFTYNLLLKGLCKNSQIDEAEELIYNL--TNQGLRPDVVSYNTIISACCNKGDTDR 598
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+LE+ +EM + ++ YH ++ L A E L + V ++P
Sbjct: 599 ALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEP 648
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 137/339 (40%), Gaps = 26/339 (7%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
+ A R F ++ G P ++ + A ++A G LDEA ++ RM + G P
Sbjct: 138 RHADVRAAFGLLVAAGARPDTFAWNKAVQACVAA---GDLDEALAMLRRMGRSEGAPPPD 194
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
+ ++ A + + G S A +F ++ G+ + Y+ +I H D E
Sbjct: 195 AFSYNVVIAGLWRSGKGS-----DALKVFDEMVDRGVAPNQITYNTMIDGHVKGG--DLE 247
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM 374
L+ +M Q G + +L + G + D + + + S + +P F Y +
Sbjct: 248 AGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRM-DETRALMDEMTSYSMLPD-GFTYSI 305
Query: 375 --EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL--LCKAEETELTESLMKEFVE 430
+ + G+ L +F E ++ + AY I L LCK + E +++ V
Sbjct: 306 LFDGLTRTGDSRTMLSLFGESLKK--GVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVH 363
Query: 431 TGMKPLMPSYINLTNMYLNLGMHDRLHLAFS--ECLEK--CRPNRTIYGIYLESLKNAGN 486
TG+ P Y L N Y + L AFS E ++ RP+ Y + L
Sbjct: 364 TGLVPTTAIYNTLINGYCQV---RDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEM 420
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
I +AE++ M + + + N ++ AY +G K
Sbjct: 421 ITEAEDLVMEMEK-SGVDPSVETFNTLIDAYGRAGQLEK 458
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 186/428 (43%), Gaps = 48/428 (11%)
Query: 178 FDFALAT----KLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGC 233
++FAL + + +YMG+ ++ ++ G +P +T++ +I +Y +G
Sbjct: 151 YNFALRSLARFDMTEYMGR---------VYSQLVQDGLLPDTVTYNTMIKSYCK---EGD 198
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
L A Y R++ GG +P N+L G L++A ++F L+ +
Sbjct: 199 LTTA-HRYFRLLLEGGLEPETFTCNALVL------GYCRTGELRKACWLF--LMMPLMGC 249
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
Q++ YS I + D + +L M++ G ++ K G V DA
Sbjct: 250 QRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA-- 307
Query: 354 TWLRLL---ESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVP-AYHK 407
RLL NG+ Y + Y+K+G +L+I +E+ E+ G Y+
Sbjct: 308 ---RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNGCHPDDWTYNT 363
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY-LNLGMHDRLHLAFSECLEK 466
+I LC ++TE E L+ V+ G P + ++ NL N Y + D L + K
Sbjct: 364 LIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSK 422
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
C+ + ++G + SL +++A+E+ N + ++ + N + I+ Y SG A
Sbjct: 423 CKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVP-NVITYTSIIDGYCKSGKVDIA 481
Query: 527 EKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLI------GLLL 580
++ +M + + L Y L + K++ K ++L L+ Q++ +I LL
Sbjct: 482 LEVLKMMERDGCQPNAWTYNSLMYGL-VKDKKLHKAMAL-LTKMQKDGIIPNVITYTTLL 539
Query: 581 GGLCIESD 588
G C E D
Sbjct: 540 QGQCDEHD 547
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 142/348 (40%), Gaps = 22/348 (6%)
Query: 153 HCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRV 212
+CM + ++ R+ MM + D + KL + + K+ + + +++ ++I G V
Sbjct: 402 YCMAEKFDD-ALRMKNKMMSSKC-KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLV 459
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ +T+ +I Y + G +D A + +M++ G QP +NSL LV
Sbjct: 460 PNVITYTSIIDGYCKS---GKVDIALEVL-KMMERDGCQPNAWTYNSLMYGLVKDKK--- 512
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
L +A + + G+ Y+ L L D D + L + M+Q G + +
Sbjct: 513 ---LHKAMALLTKMQKDGIIPNVITYTTL--LQGQCDEHDFDNAFRLFEMMEQNGLKPDE 567
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIF 390
+ K G E+A +R G+ Y ++ ++K G + +
Sbjct: 568 HAYAVLTDALCKAGRAEEAYSFIVR-----KGVALTKVYYTTLIDGFSKAGNTDFAATLI 622
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
M + + Y ++ LCK + ++ + G+K + +Y L + L
Sbjct: 623 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLRE 682
Query: 451 GMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
G HD ++E +P+ T Y +++ S G +E AE++ M
Sbjct: 683 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKM 730
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 138/325 (42%), Gaps = 20/325 (6%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
MM++ + T L + K + R +FD + G VPS MT++ +IV Y
Sbjct: 278 MMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKL- 336
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
G +++A I +++ G P +N+L GL ++AE + +N +
Sbjct: 337 --GRMNDALKI-KELMEKNGCHPDDWTYNTLIY-------GLCDQKTEEAEELLNNAVKE 386
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
G ++ LI + + D +K +M + + +V ++ K+ ++
Sbjct: 387 GFTPTVVTFTNLINGYCMAEKFDDAL--RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLK 444
Query: 350 DAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
+A++ + S NG+ Y ++ Y K G+ +LE+ + M+ + Y+
Sbjct: 445 EAKELLNEI--SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 502
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK- 466
++ L K ++ +L+ + + G+ P + +Y L + D F E +E+
Sbjct: 503 LMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF-EMMEQN 561
Query: 467 -CRPNRTIYGIYLESLKNAGNIEKA 490
+P+ Y + ++L AG E+A
Sbjct: 562 GLKPDEHAYAVLTDALCKAGRAEEA 586
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 172/436 (39%), Gaps = 45/436 (10%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
K K R+ I + VP+ + ++ +I A +EA NRM P
Sbjct: 288 KVGKWREALSLIEKEDFVPNTILYNKMISGLCEASF---FEEAMDFLNRMRSTSCI---P 341
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
++ +R L+ G L+K L + + I ++ G I++ L+ H+Y + D
Sbjct: 342 NVQT--YRILLC--GCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLV--HAYCKSDDFS 395
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV------EDAEKTWLRLLESDNGIPTP 368
L K+M++ + G V ++ G++ E AEK + +L + +
Sbjct: 396 YAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKV 455
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTESLM 425
V G+F K+ ++ EM +G+ VP Y ++I LC A E L
Sbjct: 456 NVVSFARCLCGFGKFEKAYKVIHEM---MGNGFVPDTSTYSEVIGFLCNASRVENAFFLF 512
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNA 484
KE TG+ P + +Y L + + G+ + H E + + C P Y + + A
Sbjct: 513 KEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA 572
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAW 544
+ A E+F M + N + ++ Y SG+ KA +IY M A
Sbjct: 573 KKVSVANELFELMIAKGCFP-NVITYTALIDGYCKSGNIEKACQIYARM------RGDAD 625
Query: 545 MEKLDYVLSLNRKEVKKPVSLNLSSEQRENLI--GLLLGGLCIESDEKRKRHMIRFQFNE 602
+ +D + +KP N++ G L+ GLC K R ++ F +
Sbjct: 626 IPDVDMYFKIKNNVAEKP-----------NVVTYGALVDGLCKAHKVKDARDLLETMFVD 674
Query: 603 NSRMHSVLRRYLYDQY 618
++++ L D +
Sbjct: 675 GCEPNTIVYDALIDGF 690
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 139/350 (39%), Gaps = 58/350 (16%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K +K + ++F+ +I +G P+ +T+ LI Y + G +++AC IY RM +
Sbjct: 571 KAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKS---GNIEKACQIYARM-RGDADI 626
Query: 252 PRPSLHNSLFRALVSKPG---------GLSKYY-LQQAEFIFHNLLTSGLEIQKDIYSGL 301
P ++ + + KP GL K + ++ A + + G E +Y L
Sbjct: 627 PDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDAL 686
Query: 302 I--------------------------WLHSYQDNIDK----ERISLLKK---EMQQAGF 328
I +++Y ID+ +R+ L+ K +M +
Sbjct: 687 IDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSC 746
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
+ ++ +K ++A K L + E + ++ + K G+ K LE
Sbjct: 747 APNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLE 806
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY- 447
+FREM + + + Y +I C + +L++E +T + SY + Y
Sbjct: 807 LFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYK 866
Query: 448 ----LNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEI 493
L+LG+ + + S P +Y + +++ AG +E A E+
Sbjct: 867 REFILSLGLLEEVEKNGSA------PIILLYKVLIDNFVKAGRLEVALEL 910
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 161/370 (43%), Gaps = 30/370 (8%)
Query: 178 FDFALATKLAD---------YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA 228
FD + T LA+ ++ K+ K K ++ + ++G P+ ++++ +++A+
Sbjct: 431 FDESFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCR- 489
Query: 229 PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
+ +D A ++++ M++ G +P +N + L+ G + Q + + + +
Sbjct: 490 --KKNMDLARTVFSNMLE-KGLKP----NNYTYSILID--GCFKNHDEQNVLEVVNQMTS 540
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
S +E+ +Y +I K R LL +++ F S++ KEG++
Sbjct: 541 SNIEVNGVVYQTIINGLCKVGQTSKAR-ELLANMIEEKRFCVSCMSYNSIIDGFIKEGEM 599
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
+ A + + NGI Y M+ K ++LE+ EM+ + +PAY
Sbjct: 600 DYAVAAYEEMCA--NGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 657
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLE 465
+I CK E +L E +E G+ P P Y +L + + NLG M L L +
Sbjct: 658 ALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKD 717
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC--NIILSAYLSSGDF 523
R + Y ++ L GN+ A +++ M Q +G+ +I++ G F
Sbjct: 718 GLRCDLGTYTTLIDGLLKEGNLILASDLYTEM---QAVGLVPDEIMYTVIVNGLSKKGQF 774
Query: 524 VKAEKIYDLM 533
VK K+++ M
Sbjct: 775 VKVVKMFEEM 784
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 107/498 (21%), Positives = 186/498 (37%), Gaps = 115/498 (23%)
Query: 178 FDFALATKLADYM----GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQ-G 232
F F + ++ +Y+ K+R+ DI + ++ G +P F + LSA VQ
Sbjct: 156 FGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIP----FVPYVNRTLSALVQRN 211
Query: 233 CLDEACSIYNRMIQLG--GYQPRPSLHNSLFRALV--SKPGGLSKYYLQQAEFIFHNLLT 288
+ EA +Y+RM+ +G G L L RA + KP +A +F +
Sbjct: 212 SITEAKELYSRMVAIGVDGDNGTTQL---LMRASLREEKPA--------EALEVFSRAIE 260
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
G E +YS + N+ SLL++ ++ +E SV+ K+G++
Sbjct: 261 RGAEPDSLLYSLAVQACCKTLNLAMAN-SLLREMKEKKLCVPSQETYTSVILASVKQGNM 319
Query: 349 EDAEKTWLRLLESD---------------------------------NGIPTP---AFVY 372
EDA + W + SD N P+P F
Sbjct: 320 EDAIR-WKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSV 378
Query: 373 KMEAYAKIGEFMKSLEIFREMQE----------------------------------RLG 398
+E ++K GE K+LE +++M+ G
Sbjct: 379 LIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG 438
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
A+V + I+ LCK + + L+++ G+ P + SY N+ + D
Sbjct: 439 LANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLART 498
Query: 459 AFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
FS LEK +PN Y I ++ + + E+ N M S I VN I++
Sbjct: 499 VFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTS-SNIEVNGVVYQTIINGL 557
Query: 518 LSSGDFVKA---------EKIYDLMCLKKYEIESAWME--KLDYVLSLNRKEVKKPVSLN 566
G KA EK + + C+ I +++ ++DY ++ + +S N
Sbjct: 558 CKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPN 617
Query: 567 LSSEQRENLIGLLLGGLC 584
+ + L+ GLC
Sbjct: 618 VITYTS------LMDGLC 629
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 153/386 (39%), Gaps = 23/386 (5%)
Query: 120 CKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIREN--ETGFRVYEWMMQQHWYR 177
CK L +L+R + +K + ++ TY +V +++ E R + M+
Sbjct: 278 CKTLNLAMANSLLREMKEKKLCVPSQE-TYTSVILASVKQGNMEDAIRWKDEMVSD-GIS 335
Query: 178 FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEA 237
+ AT L K D+F + N+G P+ +TF +LI + G +++A
Sbjct: 336 MNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSK---NGEMEKA 392
Query: 238 CSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI 297
Y +M LG L S+F G L ++A +F +GL
Sbjct: 393 LEFYKKMESLG-------LTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFIC 445
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
+ L WL Q IDK LL+K M+ G +V+ ++ +++ A +
Sbjct: 446 NTILSWL-CKQGKIDKA-TELLRK-MESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSN 502
Query: 358 LLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
+LE G+ + Y ++ K + LE+ +M + Y II LCK
Sbjct: 503 MLEK--GLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKV 560
Query: 416 EETELTESLMKEFVETGMKPL-MPSYINLTNMYLNLGMHDRLHLAFSE-CLEKCRPNRTI 473
+T L+ +E + SY ++ + ++ G D A+ E C PN
Sbjct: 561 GQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVIT 620
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHS 499
Y ++ L +++A E+ + M +
Sbjct: 621 YTSLMDGLCKNNRMDQALEMRDEMKN 646
>gi|125541147|gb|EAY87542.1| hypothetical protein OsI_08951 [Oryza sativa Indica Group]
Length = 482
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 158/412 (38%), Gaps = 82/412 (19%)
Query: 142 LRQEDGTYLAVHCMRIRENETGFRV--YEWMMQQHWYRFDFALATKLADYMGKERKFAKC 199
L + DG + + + + E F V + WM +Q WY D + +KL MG++ +
Sbjct: 68 LGRRDGWLQCLEGVDVDQQEMNFEVPVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMA 127
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYL-SAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN 258
+F + N G P ++ LI A+L S L +A + +M + QP +N
Sbjct: 128 MWLFSQMRNSGCRPDTSVYNSLIGAHLHSRDKSKALAKALGYFEKMKTIDRCQPNIVTYN 187
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
L RA G +K Q + +F +L S + DIY+ + +Y
Sbjct: 188 ILLRAFAQ--AGDTK----QLDILFKDLDES--PVSPDIYTYNGVMDAY----------- 228
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA 378
K G + + E +R+ + F +++Y
Sbjct: 229 ------------------------GKNGMITEMESVLVRMKSNQCRPDVITFNILIDSYG 264
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
+ F K ++F+ + + P ++ +I KA E E ++ + E G KP
Sbjct: 265 RKQAFDKMEQVFKSLLRSKEKPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYV 324
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
+ L MY A+ +C + +A +IF+ +
Sbjct: 325 TQECLIMMY-----------AYCDC-----------------------VSRARQIFDELV 350
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDY 550
S Q V+ S N +L AY +G ++A+++ D + +KK + SA KL Y
Sbjct: 351 SSQN-NVHLSSVNAMLDAYCMNGLPMEADQLLDSV-IKKGAVPSASTYKLLY 400
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 142/360 (39%), Gaps = 14/360 (3%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
MQ D L GK +++ +F + G P + TF+ILI AY
Sbjct: 354 MQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRC-- 411
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G D+A SIY+ M+Q G P + N+L AL + + AE I L S
Sbjct: 412 -GSSDQALSIYDGMLQ-AGCTPDLATFNTLLAALAREG------RWEHAELILDELNRSS 463
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ Y+ + LH+Y + + E++ + + K +L + + V +K V++
Sbjct: 464 YKPNDIAYASM--LHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDE 521
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
AE +L + T F + Y K G K+ + F ++ V Y+ ++
Sbjct: 522 AEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMG 581
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRP 469
+ + E+ ++E + G P + SY + Y G F E + +P
Sbjct: 582 MYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQP 641
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
+ Y ++ N G +A + HMH + + ++ AY G F + E+I
Sbjct: 642 DSFTYNTFVGCYVNGGMFPEALSVVKHMHK-TGCKPDEVTYRTLVDAYCKIGKFEEVERI 700
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 153/358 (42%), Gaps = 32/358 (8%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D GK + + ++ ++ + G +P+ +T++ L+ A+ A G + A + + M+
Sbjct: 229 LLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRA---GLCNAAAEMKDSMV 285
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
G +P + SL A S+ G + +QA I++ + TS ++ LI +H
Sbjct: 286 S-KGIEPDVFTYTSLLSAY-SRAGKV-----EQAMEIYNQMRTSNCTPNSFTFNALIGMH 338
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
N + + ++ ++MQ G E S+L K G + K + + ++
Sbjct: 339 GKNKNFSE--MMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEP 396
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
F +EAY + G ++L I+ M + + + ++ ++ L + E E ++
Sbjct: 397 DKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELIL 456
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLG-------MHDRLH---LAFSECLEKCRPNRTIYG 475
E + KP +Y ++ + Y N G M D LH + F++ L K T
Sbjct: 457 DELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLK-----TFVL 511
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+Y +++AE+ F M + +T + N ++S Y G KA + L+
Sbjct: 512 VY----SKCSLVDEAEDAFLAMRHHGYLS-DTSTFNAMISMYGKKGMMDKATDTFALL 564
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 134/333 (40%), Gaps = 19/333 (5%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M++ + D A L + G+ + I+D ++ G P TF+ L+ A
Sbjct: 389 MKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAR--- 445
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G + A I + + + Y+P + S+ A + GG L++ + + L T
Sbjct: 446 EGRWEHAELILDELNR-SSYKPNDIAYASMLHAYAN--GG----ELEKLKEMVDTLHTIY 498
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ K + + ++S +D+ + L M+ G+ +++ + K+G ++
Sbjct: 499 VPFTKILLKTFVLVYSKCSLVDEAEDAFLA--MRHHGYLSDTSTFNAMISMYGKKGMMDK 556
Query: 351 AEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
A T+ LL S G+ Y M Y + G + K RE + + +Y+ +
Sbjct: 557 ATDTF-ALLRS-TGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTV 614
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-- 466
I K + + E V G++P +Y Y+N GM L+ + + K
Sbjct: 615 IFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPE-ALSVVKHMHKTG 673
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
C+P+ Y +++ G E+ E I + S
Sbjct: 674 CKPDEVTYRTLVDAYCKIGKFEEVERILKFIKS 706
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 129/311 (41%), Gaps = 23/311 (7%)
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G ++A ++N M Q ++P + R L G S+ L +F +L G
Sbjct: 59 EGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRIL----GRESQ--LTTVSRLFKSLREEG 112
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ Y+ LI S KE + + +M++AG + ++ + K+G
Sbjct: 113 YPLDVYAYTSLISALSRNRKF-KEALGFFE-QMKEAGPQPSLVTYNVIIDLYGKKG---- 166
Query: 351 AEKTWLRLLE-----SDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVP 403
++W +LE GI + Y + A A ++ E+F +M+ +
Sbjct: 167 --RSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRV 224
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM-HDRLHLAFSE 462
Y+ ++++ KA +++KE G P + +Y L + + G+ + + S
Sbjct: 225 TYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSM 284
Query: 463 CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
+ P+ Y L + AG +E+A EI+N M + N+ + N ++ + + +
Sbjct: 285 VSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCT-PNSFTFNALIGMHGKNKN 343
Query: 523 FVKAEKIYDLM 533
F + I++ M
Sbjct: 344 FSEMMVIFEDM 354
>gi|224054488|ref|XP_002298285.1| predicted protein [Populus trichocarpa]
gi|222845543|gb|EEE83090.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 148/365 (40%), Gaps = 20/365 (5%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
+ EW+ QHW+ F+ L GK F + + G VP+ ++ L+ AY
Sbjct: 102 ILEWLQSQHWWDFNEMDFLMLITAYGKLGDFNGAEMVLRSMNGNGYVPNVVSHTALMEAY 161
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHN 285
G + A +I+ RM Q G +P + + + V +K+ ++AE +F
Sbjct: 162 GRG---GRYNNAEAIFRRM-QTSGPEPSALTYQIILKTFVEG----NKF--KEAEEVFET 211
Query: 286 LL---TSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
LL S LE + ++ +I++ N +K R M + G + S++
Sbjct: 212 LLNKENSPLEPDQKMFHMMIYMQKKAGNYEKARKVFAL--MAERGVPQSTVTYNSLMSF- 268
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
E + ++ K + ++ S ++ ++AY + ++L +F EM + S
Sbjct: 269 --ETNYKEVSKIYDQMQRSGLRPDVVSYALLIKAYGRARREEEALAVFEEMLDAGVRPSH 326
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
AY+ +++ + E + K P + SY + + Y+N + F
Sbjct: 327 KAYNILLDAFAISGMVEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASDMEGAENFFKR 386
Query: 463 CLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
+ +PN YG ++ N+EK EI+ M + +I N I+ AY +
Sbjct: 387 LRQDGLKPNVVTYGALIKGHAKVNNLEKMMEIYEEMQLN-SIKANQTILTTIMDAYGKNK 445
Query: 522 DFVKA 526
DF A
Sbjct: 446 DFGSA 450
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 147/358 (41%), Gaps = 25/358 (6%)
Query: 165 RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
RV + M Q D L + K K RD+FD + +G+ ++ I++
Sbjct: 307 RVSKKMTSQGILP-DVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNG 365
Query: 225 YLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
Y + +GCL + ++N M+ G P + N L +A +K G L +A IF+
Sbjct: 366 YAT---KGCLVDLTELFNLMLS-DGIAPDSHIFNVLIKAY-AKCG-----MLDRATIIFN 415
Query: 285 NLLTSGLEIQKDIYSGLIW----LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ G+E YS +I + D ++K +M G +++
Sbjct: 416 EMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKF------NQMIDQGVAPSISTYHFLIQ 469
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-S 399
GD+ A+ L+++ F + + K+G M + IF + +G
Sbjct: 470 GFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIF-DFTISIGLH 528
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
+V Y+ +++ C + E + V G++P + Y L N Y +G D
Sbjct: 529 PNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSL 588
Query: 460 FSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F E L K +P+ T+Y I L L AG A+ F+ M ++ I ++ + +I+L
Sbjct: 589 FREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEM-TESGIAMDRYTYSIVLGG 645
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/383 (19%), Positives = 156/383 (40%), Gaps = 29/383 (7%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA-- 228
M Q D + + + + K R K I ++++G +P T++ LI Y S
Sbjct: 242 MVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQ 301
Query: 229 -----------PVQGCLDEACSIYNRMIQL---GGYQPRPSLHNSL---------FRALV 265
QG L + ++ + M L G + + +S+ F +
Sbjct: 302 WKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKI 361
Query: 266 SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
G +K L +F+ +L+ G+ I++ LI ++ +D R +++ EM++
Sbjct: 362 MLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLD--RATIIFNEMRE 419
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMK 385
G E +V+ + G ++DA + + ++++ + + ++ + G+ +K
Sbjct: 420 QGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLK 479
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+ ++ +M + + ++ II LCK +++ + G+ P + Y L +
Sbjct: 480 AKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMD 539
Query: 446 MYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
Y +G M + L + +PN +YG + G I++ +F + + I
Sbjct: 540 GYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILH-KGIK 598
Query: 505 VNTRSCNIILSAYLSSGDFVKAE 527
+T NIIL +G V A+
Sbjct: 599 PSTTLYNIILHGLFQAGRTVPAK 621
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 160/368 (43%), Gaps = 26/368 (7%)
Query: 180 FALATKLADYMGKERKFAKCRDIFDDIINQGR-VPSEMTFHILIVAYLSAPVQGCLDE-- 236
ALAT A + + D+FD++++Q VP L + C D
Sbjct: 27 LALATATARVRKGTFRPEEAHDLFDELLHQATPVPGRQLNGFLAALARAPASAACRDGPA 86
Query: 237 -ACSIYNRMIQLGGYQPR---PSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLE 292
A +++NR+ + G PR P+LH + L+ + L A F +L +GL
Sbjct: 87 LAVALFNRVSRAHG--PRVLSPTLHT--YGILMDCCTRAHRPKLTLA--FFGQVLKTGLG 140
Query: 293 IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR-VCA--KEGDVE 349
I + S L+ + E + +L M G VL+ +C+ K G +
Sbjct: 141 IDTIMISNLLR-GLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQAD 199
Query: 350 DAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
+ LR++ + P A+ ++ + K G+ K+ ++F EM +R S + Y+
Sbjct: 200 E----LLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYN 255
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM-HDRLHLAFSECLE 465
++ LCKA + E+++++ V+ G+ P +Y +L Y + G + + ++ +
Sbjct: 256 CVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQ 315
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
P+ + SL G I+ A ++F+ M + + + S I+L+ Y + G V
Sbjct: 316 GILPDVVTLNSLMASLCKHGKIKDARDVFDSM-AMKGQKTDIFSYKIMLNGYATKGCLVD 374
Query: 526 AEKIYDLM 533
++++LM
Sbjct: 375 LTELFNLM 382
>gi|224104097|ref|XP_002313317.1| predicted protein [Populus trichocarpa]
gi|222849725|gb|EEE87272.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 165/399 (41%), Gaps = 52/399 (13%)
Query: 157 IREN--ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
I+EN E+ +++E + +QHWY TKL +GK R+ + +F+ +++ G P+
Sbjct: 90 IKENQWESALKIFELLRKQHWYEPRTKTYTKLLMMLGKCRQPEEGSFLFEVMLSDGLKPT 149
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY 274
+ L+ AY + G LD+A SI M + +P ++ L + L ++
Sbjct: 150 IDVYTALVSAYGKS---GQLDKAFSIVVEMKAISECKPDVYTYSILINCCIK----LHRF 202
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
L + I + G+E Y+ +I D K ++ + E G V
Sbjct: 203 ELIRG--ILAEMSYLGIECSTVTYNTII------DGYGKAKMFEEMENTLTDMIESGSSV 254
Query: 335 -----LLSVLRVCAKEGDVEDAEK--TWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSL 387
S++ +G ++ EK T +L+ I T F + +Y K G + K
Sbjct: 255 PDLFTFNSIIGAYGSKGRIDKMEKWYTEFQLMGLRQDIKT--FNILIRSYGKAGMYGKMR 312
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
+ M++R S S+ ++ IE KA + E E + G+KP +Y +L + Y
Sbjct: 313 SVLEFMEKRFFSPSIVTHNIFIETFGKAGDIETMEEYFSKMKHLGIKPNTVTYCSLVSAY 372
Query: 448 LNLGMHDRLHLAFSECLEKCRPNRTI------YGIYLESLKNAGNIEKAEEIFNHMHSDQ 501
G H+ + + + N + + + + AG+IEK E+F
Sbjct: 373 SKAG-----HIMKVDSILRQVENSDVILDTPFFNCVISAYGRAGDIEKMSELF------- 420
Query: 502 TIGVNTRSCN-------IILSAYLSSGDFVKAEKIYDLM 533
+G+ R C ++ AY + G A+ + ++M
Sbjct: 421 -LGMEGRKCKPDSITFATMIQAYNAQGMIEAAQGMENMM 458
>gi|413942671|gb|AFW75320.1| hypothetical protein ZEAMMB73_530230 [Zea mays]
Length = 542
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 155/360 (43%), Gaps = 46/360 (12%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D++I G VP +T+ ++ AY + +G L+ A +++ +I G +P +++ L
Sbjct: 222 VLDEMIGWGIVPDVVTYTTVLTAYCA---KGDLEGAQQLFDDIIA-SGRRPDATMYTVLI 277
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL--- 318
G LQ A I + +G++ + YS +I + KER S
Sbjct: 278 D------GYCHHRKLQDAARIMDEMGAAGVQPNEVTYSVVI------EACCKERKSTEAR 325
Query: 319 -LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
L +EM AG+ + V+ V ++G +A + W ++++ +P V Y
Sbjct: 326 DLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEMWRQMVK--KSVPPDNTVVSTLIY 383
Query: 378 --AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
K G ++ ++F E+ ER S+ Y+ +I LC+ E + + + VE +P
Sbjct: 384 WLCKKGMVQEARKLFDEL-ERGFLPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEP 442
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+Y L + +G + + F E + + C P++ +Y ++SL +
Sbjct: 443 NAMTYEALIKGFCKIGKSNEGYALFKEMMSRGCTPSKFLYQALVDSLSKPSH-------- 494
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSL 554
D T+ C I+ +A L DF+ +++ K + W + LD VL++
Sbjct: 495 -----DDTV------CTIVEAAALRGQDFLDGHS-WEIFIKKMVDTNETWKKYLDLVLNM 542
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 119/317 (37%), Gaps = 32/317 (10%)
Query: 245 IQLGGYQPRPSLH--NSLFRALVSKPGGL----------SKYYLQQAEFIFHNLLTSGLE 292
+ L + RPS N+L +LVS +K Y+ + N+L GL
Sbjct: 153 LSLPSFNSRPSTRSFNALLHSLVSARRLRLAAALFRAAPTKLYITP-NLVSCNILLKGLV 211
Query: 293 IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
D+ S L L EM G +VL +GD+E A+
Sbjct: 212 GIGDLNSALKVL----------------DEMIGWGIVPDVVTYTTVLTAYCAKGDLEGAQ 255
Query: 353 KTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+ + ++ S + ++ Y + + I EM + Y +IE
Sbjct: 256 QLFDDIIASGRRPDATMYTVLIDGYCHHRKLQDAARIMDEMGAAGVQPNEVTYSVVIEAC 315
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNR 471
CK ++ L +E + G P P + ++ G + + + ++K P+
Sbjct: 316 CKERKSTEARDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEMWRQMVKKSVPPDN 375
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
T+ + L G +++A ++F+ + + T + II +G+ +A +++D
Sbjct: 376 TVVSTLIYWLCKKGMVQEARKLFDELERGFLPSLLTYNSLII--GLCENGELQEAGRVWD 433
Query: 532 LMCLKKYEIESAWMEKL 548
M ++YE + E L
Sbjct: 434 DMVERRYEPNAMTYEAL 450
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 155/368 (42%), Gaps = 53/368 (14%)
Query: 169 WMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA 228
W++ + + D L D G++ + K + +++ VP+E T+ +L+ AY ++
Sbjct: 157 WILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTS 216
Query: 229 PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
G L++A +++ M + G + P ++N+ L+ GG + Q+A IF +
Sbjct: 217 ---GLLEKAEAVFAEMRKYG-FPPSAVVYNAYIDGLMK--GGDT----QKAVEIFERMKR 266
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISL-LKKEMQQAGFEEGKEVLLSVLRVCAKEGD 347
+ Y+ LI L+ K ++L + EM+ + +++ A+EG
Sbjct: 267 DRCQPSTATYTMLINLYG---KASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGL 323
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
E AE+ + +L E+ G+ + Y MEAY++ G + EIF MQ +Y
Sbjct: 324 CEKAEEIFEQLQEA--GLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASY 381
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE 465
+ +++ +A E +++ + G+ P M S++ L + Y
Sbjct: 382 NIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAY------------------ 423
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
AG + K EEI N MH I +T N +L+ Y G F K
Sbjct: 424 ----------------SRAGKVAKCEEIVNQMHKS-GIKPDTFVLNSMLNLYGRLGQFEK 466
Query: 526 AEKIYDLM 533
E++ M
Sbjct: 467 MEEVLTAM 474
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 134/323 (41%), Gaps = 17/323 (5%)
Query: 181 ALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSI 240
A T L + GK K +F ++ +Q P+ TF L+ A+ +G ++A I
Sbjct: 274 ATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAR---EGLCEKAEEI 330
Query: 241 YNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSG 300
+ ++ Q G +P +N+L A S+ G + A IF + G E + Y+
Sbjct: 331 FEQL-QEAGLEPDVYAYNALMEAY-SRAG-----FPYGAAEIFSLMQHMGCEPDRASYN- 382
Query: 301 LIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
I + +Y E + + M++ G + + +L ++ G V E+ ++ +
Sbjct: 383 -IMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHK 441
Query: 361 SDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
S GI FV + Y ++G+F K E+ M++ A + Y+ +I + +A
Sbjct: 442 S--GIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFF 499
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIY 477
E L + + P + ++ + Y ++R F E ++ C P+ +
Sbjct: 500 ARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVL 559
Query: 478 LESLKNAGNIEKAEEIFNHMHSD 500
L + N I++ + MH D
Sbjct: 560 LSACSNGDQIQEVTTVIRTMHKD 582
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 164/414 (39%), Gaps = 33/414 (7%)
Query: 138 QKKWLRQEDGTYLAVHCMRIRENET-GFRVYEWMMQQHWY-------------RFDFALA 183
+K W+ EDG RE T FR ++W R +F L
Sbjct: 241 RKNWVYGEDGKDYRSKWHEEREGSTKAFRKVLDTQPENWQAVVSAFERIKKPSRREFGL- 299
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
+ Y + + R F+ + +G PS + LI AY V ++EA S +
Sbjct: 300 --MVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAY---AVGRDMEEALSCVRK 354
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
M + G + SL + GG +K+ + A+ F + IY +I
Sbjct: 355 MNEEG-------IEMSLVTYSIVV-GGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNII 406
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+ + N+D R L +EM++ G + ++ +++ + E + RL E
Sbjct: 407 YAYCQACNMD--RAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECG 464
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+ + Y KIG+ K+LE+ + M+ ++ Y +I K ++
Sbjct: 465 FAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAF 524
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTIYGIYLESL 481
++ ++ ++ G+KP + Y N+ + +G DR +H+ E+CRP + +
Sbjct: 525 AVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGF 584
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCL 535
AG + +A EIF+ M I + N ++ + KA +I D M L
Sbjct: 585 ARAGEMRRALEIFDMMRRSGCIPT-VHTFNALVLGLVEKRKMEKAVEILDEMAL 637
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 132/307 (42%), Gaps = 29/307 (9%)
Query: 187 ADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQ 246
A +M KE + +CR P+ TF +I + A G + A I++ M +
Sbjct: 558 AIHMVKEMQKERCR------------PTSRTFMPIIHGFARA---GEMRRALEIFDMMRR 602
Query: 247 LGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHS 306
G P++H F ALV G + K +++A I + +G+ + Y+ + +H
Sbjct: 603 SGCI---PTVHT--FNALVL--GLVEKRKMEKAVEILDEMALAGVSPDEHTYTTI--MHG 653
Query: 307 YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
Y D + +M+ G + ++L+ C K G ++ A + + IP
Sbjct: 654 YAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREM--NAQKIP 711
Query: 367 TPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
FVY + + +A+ G+ ++ ++ ++M + + Y I CKA +
Sbjct: 712 RNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKT 771
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKN 483
M+E G+KP + +Y L + + N + ++ F E L +P++ +Y + SL +
Sbjct: 772 MEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLS 831
Query: 484 AGNIEKA 490
+ +A
Sbjct: 832 RATVAEA 838
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 155/368 (42%), Gaps = 53/368 (14%)
Query: 169 WMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA 228
W++ + + D L D G++ + K + +++ VP+E T+ +L+ AY ++
Sbjct: 195 WILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTS 254
Query: 229 PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
G L++A +++ M + G + P ++N+ L+ GG + Q+A IF +
Sbjct: 255 ---GLLEKAEAVFAEMRKYG-FPPSAVVYNAYIDGLMK--GGDT----QKAVEIFERMKR 304
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISL-LKKEMQQAGFEEGKEVLLSVLRVCAKEGD 347
+ Y+ LI L+ K ++L + EM+ + +++ A+EG
Sbjct: 305 DRCQPSTATYTMLINLYG---KASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGL 361
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
E AE+ + +L E+ G+ + Y MEAY++ G + EIF MQ +Y
Sbjct: 362 CEKAEEIFEQLQEA--GLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASY 419
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE 465
+ +++ +A E +++ + G+ P M S++ L + Y
Sbjct: 420 NIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAY------------------ 461
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
AG + K EEI N MH I +T N +L+ Y G F K
Sbjct: 462 ----------------SRAGKVAKCEEIVNQMHKS-GIKPDTFVLNSMLNLYGRLGQFEK 504
Query: 526 AEKIYDLM 533
E++ M
Sbjct: 505 MEEVLTAM 512
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 134/323 (41%), Gaps = 17/323 (5%)
Query: 181 ALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSI 240
A T L + GK K +F ++ +Q P+ TF L+ A+ +G ++A I
Sbjct: 312 ATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAR---EGLCEKAEEI 368
Query: 241 YNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSG 300
+ ++ Q G +P +N+L A S+ G + A IF + G E + Y+
Sbjct: 369 FEQL-QEAGLEPDVYAYNALMEAY-SRAG-----FPYGAAEIFSLMQHMGCEPDRASYN- 420
Query: 301 LIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
I + +Y E + + M++ G + + +L ++ G V E+ ++ +
Sbjct: 421 -IMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHK 479
Query: 361 SDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
S GI FV + Y ++G+F K E+ M++ A + Y+ +I + +A
Sbjct: 480 S--GIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFF 537
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIY 477
E L + + P + ++ + Y ++R F E ++ C P+ +
Sbjct: 538 ARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVL 597
Query: 478 LESLKNAGNIEKAEEIFNHMHSD 500
L + N I++ + MH D
Sbjct: 598 LSACSNGDQIQEVTTVIRTMHKD 620
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 140/325 (43%), Gaps = 22/325 (6%)
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
R +F L K + G+ + R+ F+ + +G P+ + LI AY V +DE
Sbjct: 309 RTEFGLMVK---FYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAY---AVGRDMDE 362
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSL--FRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEI 293
A S +M + G + SL + +V GG SK + + A++ F +
Sbjct: 363 ALSCVRKMKEEG-------IEMSLVTYSVIV---GGFSKAGHAEAADYWFDEAKRIHKTL 412
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
IY +I+ H N+ ER L +EM++ G + + +++ D +
Sbjct: 413 NASIYGKIIYAHCQTCNM--ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLV 470
Query: 354 TWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
+ RL E + + Y K+G+ K+LE+ R M+E ++ Y +I
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 414 KAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRT 472
K ++ ++ ++ V+ GMKP + Y N+ + + +G DR E + + RP
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHM 497
+ + +G++ ++ E+F+ M
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMM 615
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 118/290 (40%), Gaps = 21/290 (7%)
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYY----LQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
G+ P + L L +K G +SK + + E + HNL T + I +G + L
Sbjct: 479 GFTPTVVTYGCLIN-LYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI-----NGFVKL 532
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
+ + + ++M + G + + +++ G+++ A +T + + +
Sbjct: 533 KDWANAF------AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR 586
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
T F+ + YAK G+ +SLE+F +M R G VP H L+ E +
Sbjct: 587 PTTRTFMPIIHGYAKSGDMRRSLEVF-DMMRRCG--CVPTVHTFNGLINGLVEKRQAVEI 643
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKN 483
+ E G+ +Y + Y ++G + F+ E + Y L++
Sbjct: 644 LDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCK 703
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+G ++ A + M S + I N+ NI++ + GD +A + M
Sbjct: 704 SGRMQSALAVTKEM-SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 752
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 145/352 (41%), Gaps = 22/352 (6%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F+ +++ G P T+H L++ L Q +D+A ++ ++ ++ G++P S++ L
Sbjct: 147 MFERMLDAGYAPDSYTYH-LVIKSLCQMNQ--IDKAFTMLDKA-KVRGFKPEVSVYTILT 202
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
RA K G L+ A IF N+ + Y+ +I H +++ D L K
Sbjct: 203 RAFC-KTG-----RLKDALEIFRNIPSP----DAIAYNAIIHGHCRKNDCDGALEFL--K 250
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
EM + ++ K + A + +++ T F M+ K G
Sbjct: 251 EMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAG 310
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+F ++ + M ER S Y+ +I LCK + + + L+ EFV +G P + +Y
Sbjct: 311 KFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYS 370
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
L + G D E K C PN Y ++ L A EKA E+ + S
Sbjct: 371 ILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSS 430
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM----CLKKYEIESAWMEKL 548
+ + + II+ G KA K+ + M C +A ME L
Sbjct: 431 GFVP-DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 481
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 150/376 (39%), Gaps = 36/376 (9%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + K K K ++ +++++G P +TF+ ++ A G + A S+ M
Sbjct: 267 LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKA---GKFERAHSLLAVMA 323
Query: 246 QLGGYQPRPSLHNSLFRAL-----VSKPGGLSKYYLQQA---EFIFHNLLTSGL------ 291
+ +P +N+L L V + L ++ + + +++L GL
Sbjct: 324 ERN-CRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRI 382
Query: 292 ----EIQKDIYS-----GLIWLHSYQDNIDK----ERISLLKKEMQQAGFEEGKEVLLSV 338
E+ K++ L+ ++ D + K E+ L + + +GF +
Sbjct: 383 DEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTII 442
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
+ KEG ++ A K +L+ + ME + G ++ IF+EM +
Sbjct: 443 VDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 502
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
+A AY ++ CK+ T+ + ++ T P + Y L + Y G D +
Sbjct: 503 TADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPN 559
Query: 459 AFSE-CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
F + C PN Y I ++ L G +++A MHS + + S NII+
Sbjct: 560 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVP-DVVSYNIIIDGL 618
Query: 518 LSSGDFVKAEKIYDLM 533
+ +A ++ D M
Sbjct: 619 FKASKPKEARQVLDQM 634
Score = 39.3 bits (90), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 125/316 (39%), Gaps = 24/316 (7%)
Query: 188 DYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL 247
D + K K + + + + G VP ++++I+I A EA + ++MIQ
Sbjct: 581 DGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKP---KEARQVLDQMIQ- 636
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
G P +N+L + A I N++ +G++ Y+ LI S
Sbjct: 637 AGIPPDAVTYNTLMAQFCKEE------RFDDAVGILKNMIKAGVDPDNVTYNTLISGLS- 689
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE--SDNGI 365
Q N + L+ + ++ +++ KEG ++ A L L++ + +G+
Sbjct: 690 QTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQA----LLLMDHMTGHGV 745
Query: 366 PTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
Y + + K G ++ + EM S Y +I LCKAE+ +
Sbjct: 746 EANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVS---YTTVIIGLCKAEQLDRASK 802
Query: 424 LMKEFVET-GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESL 481
L +E V G+ ++ L + + D +++ C P+ Y + + L
Sbjct: 803 LAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCL 862
Query: 482 KNAGNIEKAEEIFNHM 497
++KA E+F+ M
Sbjct: 863 CKLDKVDKAWELFDEM 878
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 142/368 (38%), Gaps = 20/368 (5%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M H D L DY+ K K + R +FD +I +G PS + I++ Y
Sbjct: 426 MSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGK--- 482
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G L E + N M+ G P + N++ A + + + IF + G
Sbjct: 483 KGALSEMHDLLNLMVA-NGISPNHRIFNTVICAYAKRA------MIDEVMHIFIKMKQQG 535
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
L Y LI +D + +M G V S++ E
Sbjct: 536 LSPNVVTYGTLIDALCKLGRVDDAVLQF--NQMINEGVTPNNVVFNSLVYGLCTVDKWEK 593
Query: 351 AEKTWLRLLESDNGI-PTPAFVYKMEA-YAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
E+ +L +L + GI P F + K G M++ + M V +Y+ +
Sbjct: 594 VEELFLEML--NQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTL 651
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-C 467
I+ C A + L+ V G+KP + SY L + Y G D + F E L K
Sbjct: 652 IDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGV 711
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIF-NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
P Y L L +G +A E++ N + S + + T S IIL + + F +A
Sbjct: 712 TPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYS--IILDGFCKNNCFDEA 769
Query: 527 EKIYDLMC 534
KI+ +C
Sbjct: 770 FKIFQSLC 777
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 91/193 (47%), Gaps = 9/193 (4%)
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSAS 401
EG V+ A +L + G+ Y ++ K E ++ ++F++M E+ +
Sbjct: 205 NEGQVDKAYSLFLEM-----GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPN 259
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
Y+ II+ LCKA+E ++ E + ++ V+ G+KP +Y + + DR F
Sbjct: 260 NVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQ 319
Query: 462 ECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSS 520
+ +++ +P+ Y ++ L A I+KAE +F M D+ + + + II+ +
Sbjct: 320 QMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQM-IDKGVKPDNLTYTIIIDGLCKA 378
Query: 521 GDFVKAEKIYDLM 533
+AE ++ M
Sbjct: 379 QSVDRAEGVFQQM 391
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 142/355 (40%), Gaps = 26/355 (7%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ D + K + + +F +I++G P +T++ +I A +D+A ++ +MI
Sbjct: 301 IIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQA---IDKAEGVFQQMI 357
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
G +P + + L + +AE +F ++ G++ Y+ LI H
Sbjct: 358 D-KGVKPDNLTYTIIIDGLCKAQS------VDRAEGVFQQMIDKGVKPNNGTYNCLI--H 408
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
Y E + KEM E +L K G +A + ++ GI
Sbjct: 409 GYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRK--GI 466
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE-LLCKAEETELTE 422
+Y + Y K G +L ++ + + + H+I ++C + + +
Sbjct: 467 KPSVTIYGIMLHGYGKKG----ALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMID 522
Query: 423 SLMKEFV---ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYL 478
+M F+ + G+ P + +Y L + LG D L F++ + E PN ++ +
Sbjct: 523 EVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLV 582
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
L EK EE+F M +Q I + N +L G ++A ++ D M
Sbjct: 583 YGLCTVDKWEKVEELFLEML-NQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSM 636
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 135/324 (41%), Gaps = 21/324 (6%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P ++++I+I + + +G +D+A S++ M G P +N++ L
Sbjct: 191 PDVVSYNIVINGFFN---EGQVDKAYSLFLEM----GVSPDVVTYNTIIDGLCKAQ---- 239
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ +AE +F ++ G++ Y+ +I +D K M G +
Sbjct: 240 --EVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQK--MVDKGVKPSN 295
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIF 390
+++ K V+ AE + +++ D G+ Y ++ K K+ +F
Sbjct: 296 VTYNTIIDGLCKAQAVDRAEGVFQQMI--DRGVKPDHVTYNTIIDGLCKAQAIDKAEGVF 353
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
++M ++ Y II+ LCKA+ + E + ++ ++ G+KP +Y L + YL+
Sbjct: 354 QQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLST 413
Query: 451 GMHDRLHLAFSE-CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
G + + E P+ YG+ L+ L G +A +F+ M + I +
Sbjct: 414 GQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIR-KGIKPSVTI 472
Query: 510 CNIILSAYLSSGDFVKAEKIYDLM 533
I+L Y G + + +LM
Sbjct: 473 YGIMLHGYGKKGALSEMHDLLNLM 496
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 140/325 (43%), Gaps = 22/325 (6%)
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
R +F L K + G+ + R+ F+ + +G P+ + LI AY V +DE
Sbjct: 309 RTEFGLMVK---FYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAY---AVGRDMDE 362
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSL--FRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEI 293
A S +M + G + SL + +V GG SK + + A++ F +
Sbjct: 363 ALSCVRKMKEEG-------IEMSLVTYSVIV---GGFSKAGHAEAADYWFDEAKRIHKTL 412
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
IY +I+ H N+ ER L +EM++ G + + +++ D +
Sbjct: 413 NASIYGKIIYAHCQTCNM--ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLV 470
Query: 354 TWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
+ RL E + + Y K+G+ K+LE+ R M+E ++ Y +I
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 414 KAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRT 472
K ++ ++ ++ V+ GMKP + Y N+ + + +G DR E + + RP
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHM 497
+ + +G++ ++ E+F+ M
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMM 615
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 118/290 (40%), Gaps = 21/290 (7%)
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYY----LQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
G+ P + L L +K G +SK + + E + HNL T + I +G + L
Sbjct: 479 GFTPTVVTYGCLIN-LYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI-----NGFVKL 532
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
+ + + ++M + G + + +++ G+++ A +T + + +
Sbjct: 533 KDWANAF------AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR 586
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
T F+ + YAK G+ +SLE+F +M R G VP H L+ E +
Sbjct: 587 PTTRTFMPIIHGYAKSGDMRRSLEVF-DMMRRCG--CVPTVHTFNGLINGLVEKRQAVEI 643
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKN 483
+ E G+ +Y + Y ++G + F+ E + Y L++
Sbjct: 644 LDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCK 703
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+G ++ A + M S + I N+ NI++ + GD +A + M
Sbjct: 704 SGRMQSALAVTKEM-SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 752
>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 174/410 (42%), Gaps = 34/410 (8%)
Query: 132 VRILNAQKKW-LRQEDGTY---LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLA 187
+ L KW LR TY L H +R RE GF VYE M ++ Y D L
Sbjct: 171 TKCLELAMKWGLRLNGYTYKCILQAH-LRSREVSKGFEVYEEM-RRKGYMLDIFGYNMLL 228
Query: 188 DYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL 247
D + K + +F+D+ + P T+ ILI A G + S ++ M+
Sbjct: 229 DALAKSGMVDQAYQVFEDMKQKYCEPDAYTYTILIRMSGRA---GKASKFLSFFDEMVSK 285
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
G + +N+L AL G +K + + F+ ++ G + + YS + + +
Sbjct: 286 GCALNLIA-YNTLIEAL-----GKNKM-VDKVIFVLSKMIEGGCQPNQFTYSITLDILAK 338
Query: 308 QDNIDK--ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+ + + E + + + M K + +++ +K G V +A + ++ S
Sbjct: 339 EGQLHRLNEVLDICDRYMN-------KSIYSYLVKSLSKSGHVSEAHNVFCQMWNSYETG 391
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
AFV +E G+ ++++++ M E+ + V Y+ + L K ++ SL
Sbjct: 392 DRDAFVSMLEVLCNSGKTLEAIDLLHMMPEKGVATDVGMYNMVFSALGKLKQVSFITSLF 451
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNA 484
+ G+ P + +Y + + Y +G+ D+ F + C+P+ Y + L
Sbjct: 452 DKMKANGIAPDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLINCLGKN 511
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
G++++A +F M ++ G + + +I++ F K+ K+ D+ C
Sbjct: 512 GDLDEAHMLFKEMQ-EKGYGPDVFTYSILIEC------FGKSNKV-DMAC 553
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 133/312 (42%), Gaps = 13/312 (4%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
+ ++F + R +F + QG P+ ++ ILI +DEA + N MI GG+Q
Sbjct: 64 QAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK---VDEAAELLNEMID-GGHQ 119
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P + SL L + K L++A +F ++ G +Y+ LI +
Sbjct: 120 PNVVTYGSLLSGLCK----MGK--LKEAVDLFSRMVYRGCPPDGVVYNVLI--DGFSKKG 171
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
D L +EM + G S+L +++G+ + + +L F
Sbjct: 172 DMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFN 231
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
++ + K+G+ +++ +F EM+ V +Y+ +I +C + + L++E + +
Sbjct: 232 NLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRS 291
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKA 490
G+ P + SY L + Y G D F E + P+ Y ++ L AG + A
Sbjct: 292 GVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAA 351
Query: 491 EEIFNHMHSDQT 502
+F M ++ +
Sbjct: 352 FVVFKDMIANGS 363
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 90/197 (45%), Gaps = 2/197 (1%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
+L V AK G + T+ +L + T + Y + + + F ++ +FR M +
Sbjct: 23 LLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRL 456
S +V +Y +I LC+ ++ + L+ E ++ G +P + +Y +L + +G + + +
Sbjct: 83 CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142
Query: 457 HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
L C P+ +Y + ++ G++ +A +F M I + N +LS
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI-PTVFTYNSLLSG 201
Query: 517 YLSSGDFVKAEKIYDLM 533
+ G+F + + ++ M
Sbjct: 202 FSRKGEFGRVQSLFKDM 218
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 110/258 (42%), Gaps = 18/258 (6%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K K + D+F ++ +G P + +++LI + +G + EA ++ M++ G
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK---KGDMGEAYRLFEEMLEKGCI- 189
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI-WLHSYQDN 310
P +NSL S+ G + + +F ++L G ++ L+ D
Sbjct: 190 PTVFTYNSLLSGF-SRKGEFGR-----VQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDM 243
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
++ R+ L EM+ G +++R +G +A++ ++ S G ++
Sbjct: 244 VEAHRLFL---EMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
++ Y+K G ++++F E+ + +Y II+ LC+A + + K+ +
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360
Query: 431 TGMKP----LMPSYINLT 444
G P ++P I L
Sbjct: 361 NGSAPDAAVVIPLVIGLC 378
>gi|414864365|tpg|DAA42922.1| TPA: hypothetical protein ZEAMMB73_846849 [Zea mays]
Length = 485
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 157/385 (40%), Gaps = 69/385 (17%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E+ ++E + +QHWY +L +GK R+ +F +++++ P+ +
Sbjct: 106 ESALEIFELLRKQHWYEPRSQTYARLLMMLGKCRQPGPAAGLFREMLSERLRPTADVYTA 165
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
LI AY G L+ A + +M G +P + F LV ++ L A
Sbjct: 166 LIGAY---GYSGLLEHALAAVEQM--KGAADCKPDGYT--FSVLVDCCAKSRRFDLIPA- 217
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQA---GFEEGKEV--- 334
+ + G+E I++ +I D K + + +EM+ A E G V
Sbjct: 218 -VLDEMSYLGIECNSVIHNAII------DGYGK---AAMFEEMEGALSTMLESGSNVPDI 267
Query: 335 --LLSVLRVCAKEGDVEDAEKTW----LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
+ SV+ G ++ EK++ L +E D T F + +Y K G ++K +
Sbjct: 268 YTMNSVVGAYGNHGRTDEMEKSYSEFQLMGVEPD----TKTFNIMIRSYGKAGMYVKMMS 323
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
IFR M++R S + ++ +IE +A + E E + G+KP +Y +L N Y
Sbjct: 324 IFRYMKKRFFSPTAVTFNTVIECFGRAGDIEKMEYYFRLMKIQGVKPNPITYCSLVNGYS 383
Query: 449 NLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTR 508
G+ D++ AG I + E + + ++T
Sbjct: 384 KAGLLDKV---------------------------AGVIRQTE--------NTNVVLDTP 408
Query: 509 SCNIILSAYLSSGDFVKAEKIYDLM 533
N ++SAY SGD E++ LM
Sbjct: 409 FFNCVISAYAKSGDIKIMEEMLQLM 433
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 132/318 (41%), Gaps = 18/318 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH--NS 259
+ +++ +GR T LI AY G +A ++N Q + P++H
Sbjct: 17 LLKEMVAEGRPLRPNTLVKLITAYGRGNKSG---DAFDLFN---QAESFACSPTVHAFTK 70
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
L LV+ ++AE ++ L+ G ++ + Y+ LI +D +
Sbjct: 71 LIDILVNSG------EFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSA--MEM 122
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAK 379
+EM+ G E + ++ K G V++A + +LE P + M+A+ K
Sbjct: 123 FREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRK 182
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
+G+ +L +F EM+ R SV Y+ +++ LC A L + G P +
Sbjct: 183 VGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYT 242
Query: 440 YINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI-YGIYLESLKNAGNIEKAEEIFNHMH 498
Y L N G + H F E +++ + Y L +L AGN+++ ++ M
Sbjct: 243 YSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEM- 301
Query: 499 SDQTIGVNTRSCNIILSA 516
S + + S N I+ A
Sbjct: 302 SRKGFHPDAFSFNTIMDA 319
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 134/318 (42%), Gaps = 19/318 (5%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
TKL D + +F + ++ ++ +G +++LI + + G LD A ++
Sbjct: 69 TKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRS---GQLDSAMEMFRE 125
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M ++ G +P + L AL K G +Q+A F +L GL Y+ L+
Sbjct: 126 M-KIKGSEPDEYTYGFLVNAL-GKAG-----RVQEARSFFDAMLERGLTPNIPTYNLLMD 178
Query: 304 LHSYQDNIDKERISL-LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+D ++L L EM++ GF+ +L G V A K + ++ +
Sbjct: 179 AFRKVGQLD---MALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKM--TG 233
Query: 363 NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
+G ++ Y + K G ++ ++FREM +R + + Y+ ++ L KA +
Sbjct: 234 DGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDR 293
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLE 479
LMKE G P S+ + + D F+ +E C+P+ Y I ++
Sbjct: 294 VWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILID 353
Query: 480 SLKNAGNIEKAEEIFNHM 497
S G+ +A ++ M
Sbjct: 354 SYARFGDAAQARQMLEEM 371
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 151/395 (38%), Gaps = 69/395 (17%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + +GK + + R FD ++ +G P+ T+++L+ A+ G LD A ++ M
Sbjct: 141 LVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKV---GQLDMALGLFAEM- 196
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ G+QP +N L AL S + A +FH + G YS L+
Sbjct: 197 KRRGFQPSVVTYNILLDALCSAG------RVGAARKLFHKMTGDGCSPDSYTYSTLV--- 247
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
K G VE+A K + ++ D G+
Sbjct: 248 ----------------------------------NGLGKSGRVEEAHKVFREMV--DRGV 271
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
Y + AK G + ++ +EM + +++ I++ L KA + +
Sbjct: 272 AVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAARE 331
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLK 482
+ VE+G KP + SY L + Y G + E +E P Y + L
Sbjct: 332 VFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLA 391
Query: 483 NAGNIEKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEI 540
G +++A + M +T G + + N ++ G+ +A +++ M K E
Sbjct: 392 TDGQVDEAFAVLEEM---ETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEP 448
Query: 541 ES----------AWMEKLDYVLSL--NRKEVKKPV 563
++ A+ ++LD L L + K V PV
Sbjct: 449 DTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPV 483
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 96/205 (46%), Gaps = 2/205 (0%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
++ + G+ E AE + +L++ + A+ + + + G+ ++E+FREM+ +
Sbjct: 71 LIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKG 130
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
Y ++ L KA + S +E G+ P +P+Y L + + +G D
Sbjct: 131 SEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMAL 190
Query: 458 LAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F+E + +P+ Y I L++L +AG + A ++F+ M D ++ + + +++
Sbjct: 191 GLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGD-GCSPDSYTYSTLVNG 249
Query: 517 YLSSGDFVKAEKIYDLMCLKKYEIE 541
SG +A K++ M + ++
Sbjct: 250 LGKSGRVEEAHKVFREMVDRGVAVD 274
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ AY + + + ++F + + S +V A+ K+I++L + E E E + K+ V+ G
Sbjct: 37 ITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGC 96
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
+ +Y L + G D F E ++ P+ YG + +L AG +++A
Sbjct: 97 QLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARS 156
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
F+ M ++ + N + N+++ A+ G A ++ M + ++
Sbjct: 157 FFDAML-ERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQ 202
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 123/284 (43%), Gaps = 17/284 (5%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
C + E GFR+ + +M+ D + L + + KE + + +FD++ +G VP
Sbjct: 187 CCKAGAVEEGFRL-KGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVP 245
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK 273
+ +TF +LI G +D A + M+ G RP L + AL++ GL K
Sbjct: 246 NGVTFTVLIDGQCKG---GKVDLALKNFQMMLAQG---VRPDL--VTYNALIN---GLCK 294
Query: 274 YY-LQQAEFIFHNLLTSGLEIQKDIYSGLI-WLHSYQDNIDKERISLLKKEMQQAGFEEG 331
L++A + + + SGL + ++ LI Y D E +K+ M + G E
Sbjct: 295 VGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYG---DMESALEIKRRMVEEGIELD 351
Query: 332 KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFR 391
++ ++G V DAE+ +L + P + ++ + K G ++ +
Sbjct: 352 DVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLK 411
Query: 392 EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
EMQ V Y+ ++ LCK + + + L+ + G+ P
Sbjct: 412 EMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAP 455
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 116/285 (40%), Gaps = 41/285 (14%)
Query: 352 EKTWLRLLES-DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
E++W LE D+G P F + M + K+G + +F E+ +R +V +++ +
Sbjct: 124 ERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTL 183
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE-CLEKC 467
I CKA E L + P + ++ L N G D L F E C +
Sbjct: 184 ISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGL 243
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
PN + + ++ G ++ A + F M + Q + + + N +++ GD +A
Sbjct: 244 VPNGVTFTVLIDGQCKGGKVDLALKNFQMMLA-QGVRPDLVTYNALINGLCKVGDLKEAR 302
Query: 528 KIYDLM------------------CLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSS 569
++ + M C K ++ESA L + R+ V++ + L+
Sbjct: 303 RLVNEMSASGLRPDRITFTTLIDGCCKYGDMESA--------LEIKRRMVEEGIELD--- 351
Query: 570 EQRENLIGLLLGGLC----IESDEKRKRHMIRFQFNENSRMHSVL 610
+ +L+ GLC + E+ R M+ F + ++++
Sbjct: 352 ---DVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMV 393
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 152/352 (43%), Gaps = 40/352 (11%)
Query: 211 RVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGG 270
+ P TF +I A G + A ++ MI+ G P +N++ L + G
Sbjct: 286 KSPDLFTFSSMIHGLSKA---GNFNAAEKVFQEMIE-SGLSPDVRTYNAMLSGLF-RTGK 340
Query: 271 LSKYY--------LQQAEFIFHNLLTSGLEIQKDIYSGLIW---LHSYQDNIDKERISLL 319
L+K + + +N+L GL K + + + LH D LL
Sbjct: 341 LNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLL 400
Query: 320 KKEMQQAGF------------EEGKEV----LLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ + G+ EG ++ S++ K+G +E A + ++ ++
Sbjct: 401 INGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRR 460
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
+ + F + Y + + +++ + REM+ + + +V +Y+ II LCKAE
Sbjct: 461 KLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYL 520
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS---ECLEK-CRPNRTIYGIYLE 479
+KE +E G+KP M +Y L + L +++ +A + +C+ K +P+ ++ I +
Sbjct: 521 SLKEMLEEGLKPDMITYSLLID---GLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIH 577
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
L A ++ A EIF M + + + N I+ +GD V+A KI+D
Sbjct: 578 GLCTAQKVDVALEIFTQMRQVNCVP-DLVTHNTIMEGLYKAGDCVEALKIWD 628
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 164/409 (40%), Gaps = 70/409 (17%)
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQ 294
D+A +++ M+ + G P NS+ A + ++AE F T+G+
Sbjct: 95 DQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESN------QWREAELFFTYFQTAGMSPN 148
Query: 295 KDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKT 354
Y+ LI +IS K++ FE+GK +L T
Sbjct: 149 LQTYNILI------------KISCKKRQ-----FEKGKGLL------------------T 173
Query: 355 WLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE-L 411
W+ +NG+ Y + A AK G + ++E+F EM R + V Y+ +I+
Sbjct: 174 WM----FENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGF 229
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-PN 470
L K + + E + E+ + P + +Y + N LG D ++ + + P+
Sbjct: 230 LRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPD 289
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+ + L AGN AE++F M + + + R+ N +LS +G K +++
Sbjct: 290 LFTFSSMIHGLSKAGNFNAAEKVFQEM-IESGLSPDVRTYNAMLSGLFRTGKLNKCFELW 348
Query: 531 DLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQR-----ENLIGLLLGGLC- 584
++M K + + L+ K+V++ + +R GLL+ GLC
Sbjct: 349 NVM--SKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCK 406
Query: 585 ----------IESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEWLH 623
+E E + F + +S +H + ++ + +Q E +H
Sbjct: 407 NGYLNKALRILEEAENEGADLDTFAY--SSMVHGLCKKGMLEQAVELIH 453
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 52/292 (17%), Positives = 124/292 (42%), Gaps = 25/292 (8%)
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
+++L + P+ ++F + PG F+FH++L ++ + ++ G I
Sbjct: 13 VLKLLKAEKNPNAALAIFDSACQHPG------YAHPPFVFHHILRRLMDPKLVVHVGRI- 65
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ L++ + ++V LS ++ AK + A + +++
Sbjct: 66 ------------VDLMRAQRCTCS----EDVALSAIKAYAKCSMPDQALNLFQNMVDIFG 109
Query: 364 GIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
P +F + A+ + ++ ++ F Q S ++ Y+ +I++ CK + E +
Sbjct: 110 CNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGK 169
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESL 481
L+ E G+ P + SY L N G + D + L + P+ Y I ++
Sbjct: 170 GLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGF 229
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G+ KA EI+ + ++ ++ + + NI+++ G ++ ++++ M
Sbjct: 230 LRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRM 281
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 173/433 (39%), Gaps = 55/433 (12%)
Query: 139 KKWLRQ----EDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFA-LATKLADYMGKE 193
+KW Q ED YL E E + YEWM+QQ R +++ LA+ + +G+
Sbjct: 154 EKWSHQLVGLEDFPYLLRELGNRGEWERALQGYEWMVQQVHLRSEWSKLASIMISTLGRL 213
Query: 194 RKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPR 253
K D+F+ G + + ++ AY + G EA ++ M + G +P
Sbjct: 214 GKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRS---GRCREALKVFQAM-KKAGCKPN 269
Query: 254 PSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI-D 312
+N++ A GG+ L+QA IF + G+E + ++ LI + S D
Sbjct: 270 LITYNTIIDA--CGKGGVD---LKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWED 324
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
+R+ EMQ+ G E+ +++ K G +E A + + +
Sbjct: 325 SQRVF---AEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYST 381
Query: 373 KMEAYAKIGEFMKSLEIFREMQ----------------------------------ERLG 398
++ Y K+G F +++ ++ +M+ ER+G
Sbjct: 382 MIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVG 441
Query: 399 -SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
A V Y+ +I+ K + + L + G+ P + +Y L + Y GMH +
Sbjct: 442 LKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVS 501
Query: 458 LAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F+E +P+ +Y ++S G +E A + M + I N + N ++ A
Sbjct: 502 NVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEM-TQAGIQPNIVTYNSLIDA 560
Query: 517 YLSSGDFVKAEKI 529
Y G K E +
Sbjct: 561 YGRYGQADKLEAV 573
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 121/278 (43%), Gaps = 13/278 (4%)
Query: 158 RENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMT 217
R + GFR+ + M + Y F + L + KE + +FD++ +G P+ +T
Sbjct: 272 RNLDEGFRLKKTMEENRIYPDVFTYSV-LIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
F LI + +D A + Y++M+ +G +P ++N+L L K G ++K
Sbjct: 331 FTALIDGQCRSRR---IDSAMNTYHQMLTMG-VKPDLVMYNTLLNGLC-KVGDVNK---- 381
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
A + + G++ K Y+ LI Y D E ++K M + G +
Sbjct: 382 -ARKLVDEMRMVGMKPDKITYTTLI--DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 438
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
++ ++G V DAE+T ++E+ + ++ Y K G ++ +EMQ
Sbjct: 439 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 498
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
V Y+ ++ LCK + + L++ + G+ P
Sbjct: 499 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTP 536
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 113/283 (39%), Gaps = 16/283 (5%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P T+ +LI +G LD A +++ M Q G RP + F AL+ G
Sbjct: 291 PDVFTYSVLIHGLCK---EGRLDVAEQLFDEMQQRG---LRP--NGITFTALID--GQCR 340
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ A +H +LT G++ +Y+ L+ +++K R L EM+ G + K
Sbjct: 341 SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKAR--KLVDEMRMVGMKPDK 398
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
+++ KEGD+E A + + E + AF + + + G + RE
Sbjct: 399 ITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLRE 458
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
M E Y +I+ CK ++ L+KE G KP + +Y L N G
Sbjct: 459 MVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQ 518
Query: 453 HDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
++ L P+ Y I LE G KAE++
Sbjct: 519 MKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLL 558
Score = 39.3 bits (90), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 84/211 (39%), Gaps = 6/211 (2%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
E+ + GF + ++ KEG + DA+ + + + T +F + K
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ + + M+E V Y +I LCK ++ E L E + G++P ++
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332
Query: 442 NLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
L + D + + L +P+ +Y L L G++ KA ++ + M
Sbjct: 333 ALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM--- 389
Query: 501 QTIGV--NTRSCNIILSAYLSSGDFVKAEKI 529
+ +G+ + + ++ Y GD A +I
Sbjct: 390 RMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 189/468 (40%), Gaps = 82/468 (17%)
Query: 138 QKKWLRQEDGTYLAVHCM--------RIRENETGFRVYEWMMQQHWYRFDFALATKLADY 189
K LR G + VH M R+ E E FR ++ + D + +
Sbjct: 209 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFR----ETKERGVKLDAGAYSIIIQA 264
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
+ K+ ++ +++ +G VPSE TF +IVA ++ QG + EA + MI G
Sbjct: 265 VCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVA---QGNMVEALRLKEEMINCG- 320
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
+P +L A G ++ L A +F+ + GL K YS LI
Sbjct: 321 ---KPM---NLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLI------- 367
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
EG C G++E A + + ++ NGIP
Sbjct: 368 --------------------EG----------CCNSGNIEKASELYTQM--KLNGIPPSV 395
Query: 370 FVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
F + Y K + ++ ++F E + G A++ Y+ ++ LCK + + SL+
Sbjct: 396 FNVNSLLRGYLKAPLWEEASKLFDEAVD-CGVANIFTYNIMMSWLCKGGKMDEACSLLDN 454
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGN 486
V GM P + SY ++ + G D FS+ L + +PN Y I ++ G+
Sbjct: 455 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGD 514
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA-EKIYDLM-------CLKKY 538
EKA ++F+ M S I + N I++ G +A +K+ + + C+
Sbjct: 515 SEKALDLFDQMLS-LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYN 573
Query: 539 EIESAWMEK--LDYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLC 584
I ++++ +D L++ R+ + VS N+ + L+ G C
Sbjct: 574 SIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTS------LINGFC 615
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/384 (19%), Positives = 158/384 (41%), Gaps = 49/384 (12%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ ++ K K + + D+++NQG VP+ ++++ +I+ + +G +D A S+++ M+
Sbjct: 435 MMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCR---KGNMDMASSVFSDML 491
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+P++ + L+ G K ++A +F +L+ + ++ +I
Sbjct: 492 ---ARDLKPNV--VTYSILID--GNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGL 544
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+ + R L K + GF S++ KEG+++ A + + E
Sbjct: 545 CKVGQMSEARDKL--KNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSP 602
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
+ + + K +L+ EM+E+ V AY +I+ CK + E + L
Sbjct: 603 NVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLF 662
Query: 426 KEFVETGMKP-------LMPSYINLTNMYLNL-----GMHDRL----------------- 456
E +E G+ P ++ + +L NM L ++DR+
Sbjct: 663 FELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKE 722
Query: 457 -HLAFS-----ECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
L F+ E L K P+ + + + L N G +E A +I M + + +
Sbjct: 723 GRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDR-KNMTPSVLI 781
Query: 510 CNIILSAYLSSGDFVKAEKIYDLM 533
N +++ Y G+ +A ++D M
Sbjct: 782 YNTLIAGYFREGNLKEAFTLHDEM 805
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 120/295 (40%), Gaps = 17/295 (5%)
Query: 159 ENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTF 218
++E +++ M+ + DF T + + + K + ++ RD + + +G +PS MT+
Sbjct: 514 DSEKALDLFDQMLSLNIAPTDFTFNT-IINGLCKVGQMSEARDKLKNFLEEGFIPSCMTY 572
Query: 219 HILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQ 278
+ ++ ++ +G +D A ++Y M + G P + SL G +
Sbjct: 573 NSIVDGFIK---EGNIDSALAVYREMCEFG-VSPNVVTYTSLIN------GFCKSNRIDL 622
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
A + GLE+ YS LI + D E L E+ + G + V S+
Sbjct: 623 ALKTRDEMREKGLELDVTAYSALI--DGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM 680
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQER 396
+ ++E A W + + +D IP Y ++ K G + + +++ EM +
Sbjct: 681 ISGFRDLNNME-AALVWYKKMINDR-IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSK 738
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
+ +H ++ LC + E +++E M P + Y L Y G
Sbjct: 739 GIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREG 793
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 189/468 (40%), Gaps = 82/468 (17%)
Query: 138 QKKWLRQEDGTYLAVHCM--------RIRENETGFRVYEWMMQQHWYRFDFALATKLADY 189
K LR G + VH M R+ E E FR ++ + D + +
Sbjct: 249 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFR----ETKERGVKLDAGAYSIIIQA 304
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
+ K+ ++ +++ +G VPSE TF +IVA ++ QG + EA + MI G
Sbjct: 305 VCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVA---QGNMVEALRLKEEMINCG- 360
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
+P +L A G ++ L A +F+ + GL K YS LI
Sbjct: 361 ---KPM---NLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLI------- 407
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
EG C G++E A + + ++ NGIP
Sbjct: 408 --------------------EG----------CCNSGNIEKASELYTQM--KLNGIPPSV 435
Query: 370 FVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
F + Y K + ++ ++F E + G A++ Y+ ++ LCK + + SL+
Sbjct: 436 FNVNSLLRGYLKAPLWEEASKLFDEAVD-CGVANIFTYNIMMSWLCKGGKMDEACSLLDN 494
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGN 486
V GM P + SY ++ + G D FS+ L + +PN Y I ++ G+
Sbjct: 495 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGD 554
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA-EKIYDLM-------CLKKY 538
EKA ++F+ M S I + N I++ G +A +K+ + + C+
Sbjct: 555 SEKALDLFDQMLS-LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYN 613
Query: 539 EIESAWMEK--LDYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLC 584
I ++++ +D L++ R+ + VS N+ + L+ G C
Sbjct: 614 SIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTS------LINGFC 655
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/384 (19%), Positives = 156/384 (40%), Gaps = 49/384 (12%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ ++ K K + + D+++NQG VP+ ++++ +I+ + +G +D A S+++ M+
Sbjct: 475 MMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCR---KGNMDMASSVFSDML 531
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+P ++ L G K ++A +F +L+ + ++ +I
Sbjct: 532 A-RDLKPNVVTYSILID------GNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGL 584
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+ + R L K + GF S++ KEG+++ A + + E
Sbjct: 585 CKVGQMSEARDKL--KNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSP 642
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
+ + + K +L+ EM+E+ V AY +I+ CK + E + L
Sbjct: 643 NVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLF 702
Query: 426 KEFVETGMKP-------LMPSYINLTNMYLNL-----GMHDRL----------------- 456
E +E G+ P ++ + +L NM L ++DR+
Sbjct: 703 FELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKE 762
Query: 457 -HLAFS-----ECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
L F+ E L K P+ + + + L N G +E A +I M + + +
Sbjct: 763 GRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDR-KNMTPSVLI 821
Query: 510 CNIILSAYLSSGDFVKAEKIYDLM 533
N +++ Y G+ +A ++D M
Sbjct: 822 YNTLIAGYFREGNLKEAFTLHDEM 845
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 124/307 (40%), Gaps = 24/307 (7%)
Query: 159 ENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTF 218
++E +++ M+ + DF T + + + K + ++ RD + + +G +PS MT+
Sbjct: 554 DSEKALDLFDQMLSLNIAPTDFTFNT-IINGLCKVGQMSEARDKLKNFLEEGFIPSCMTY 612
Query: 219 HILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQ 278
+ ++ ++ +G +D A ++Y M + G P + SL G +
Sbjct: 613 NSIVDGFIK---EGNIDSALAVYREMCEFG-VSPNVVTYTSLIN------GFCKSNRIDL 662
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
A + GLE+ YS LI + D E L E+ + G + V S+
Sbjct: 663 ALKTRDEMREKGLELDVTAYSALI--DGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM 720
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQER 396
+ ++E A W + + +D IP Y ++ K G + + +++ EM +
Sbjct: 721 ISGFRDLNNME-AALVWYKKMINDR-IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSK 778
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP-------LMPSYINLTNMYLN 449
+ +H ++ LC + E +++E M P L+ Y N+
Sbjct: 779 GIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEA 838
Query: 450 LGMHDRL 456
+HD +
Sbjct: 839 FTLHDEM 845
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 152/374 (40%), Gaps = 16/374 (4%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ D L DY+ K + + R IFD + +G P T+ L+ Y +
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYAT--- 348
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G L E ++ + M++ G P + N L A + + +A +F + G
Sbjct: 349 KGALVEMHALLDLMVR-NGIHPDHHVFNILICAYAKQE------KVDEAMLVFSKMRQHG 401
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
L Y +I + ++D + ++M G V S++ +
Sbjct: 402 LNPNVVTYGAVIGILCKSGSVDDAMLYF--EQMIDEGLTPNIIVYTSLIHSLCIFDKWDK 459
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKII 409
AE+ L +L+ + T F + ++ K G ++S ++F ++ R+G +V Y +I
Sbjct: 460 AEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLF-DLMVRIGVKPNVITYSTLI 518
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CR 468
+ C A + + L+ GMKP +Y L N Y + D F E +
Sbjct: 519 DGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVS 578
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
PN Y I L+ L + A+E++ + T + + NIIL + +A +
Sbjct: 579 PNIITYNIILQGLFHTRRTAAAKELYVGITKSGT-QLELSTYNIILHGLCKNNLTDEALR 637
Query: 529 IYDLMCLKKYEIES 542
++ +CL ++E+
Sbjct: 638 MFQNLCLTDLQLET 651
>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 404
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 158/376 (42%), Gaps = 23/376 (6%)
Query: 164 FRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIV 223
V+ W +Q WY + L T+L ++G+E + +F +++ + + T+ L+
Sbjct: 30 LEVFSWSKKQSWYCPNSRLYTRLIGFLGREGRVHNATLLFQEMLLEKCQADQYTYTALVN 89
Query: 224 AYLSAPVQGCLDEACSIYNRMIQLG--GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF 281
AY A + +EA ++++ M + QP N+L ALV GGL Y Q +
Sbjct: 90 AYGKAKM---FEEALAVFSHMKESNEPNCQPNTVTCNALIDALVK--GGL---YDQAIQV 141
Query: 282 IFH-----NLLTSGLEIQKDIYSGLIWLHSYQD--NIDKERISLLKKEMQQAGFEEGKEV 334
F N L G E Y+ LI + +I + + ++ +
Sbjct: 142 FFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNTDQSVQPNSAT 201
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFRE 392
+++ C K G E AE+ L L ++G+ Y ++AY K G + + F+
Sbjct: 202 YNTLINACGKGGLYEKAEE--LVDLMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKG 259
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
M+ S V AY +I+ + + E + K +G++P +Y++L Y G+
Sbjct: 260 MKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYGKAGL 319
Query: 453 HDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
+ F+ E N IY +++ AGN +A + + M N + +
Sbjct: 320 PEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMMRR-AGCQPNLITYS 378
Query: 512 IILSAYLSSGDFVKAE 527
ILS+ S +V+A+
Sbjct: 379 AILSSCCKSNCWVEAQ 394
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA---EETELTESLMKEFVETGMKPLM 437
G + +F+EM A Y ++ KA EE S MKE E +P
Sbjct: 60 GRVHNATLLFQEMLLEKCQADQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNT 119
Query: 438 PSYINLTNMYLNLGMHDRLHLAF------SECLEK-CRPNRTIYGIYLESLKNAGNIEKA 490
+ L + + G++D+ F + LE C PN Y + +++L G ++
Sbjct: 120 VTCNALIDALVKGGLYDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIG 179
Query: 491 EEIFNHM---HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++ +M ++DQ++ N+ + N +++A G + KAE++ DLM
Sbjct: 180 MKVLQYMRDGNTDQSVQPNSATYNTLINACGKGGLYEKAEELVDLM 225
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGS------ASVPAYHKIIELLCKAEETELTESLMKE 427
++A K G + +++++F +M++ +V Y+ +I+ LCK ++ +++
Sbjct: 126 IDALVKGGLYDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQY 185
Query: 428 F----VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLK 482
+ ++P +Y L N G++++ +E +P+ Y +++
Sbjct: 186 MRDGNTDQSVQPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYG 245
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
AG E AE F M + V+ + ++ AY G + KAE+++ +M
Sbjct: 246 KAGLWENAENTFKGMKG-TNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMM 295
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 157/338 (46%), Gaps = 24/338 (7%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + + K+ + + D++ +G VP+E+T++ +I ++G LD+A S+ +RM+
Sbjct: 264 LINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLC---LKGKLDKAVSLLDRMV 320
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
P + +L LV + + +L +L G + YS LI
Sbjct: 321 A-SKCVPNDVTYGTLINGLVKQGRSVDGVHL------LSSLEERGHHANEYAYSTLIS-G 372
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+++ +E + L KK M + G + V +++ +EG +++A++ ++ + G
Sbjct: 373 LFKEEKSEEAMGLWKK-MVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV--NKGC 429
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
AF Y ++ + K G K++ +++EM + + Y +I LC E+ +L E+
Sbjct: 430 TPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC--EDGKLREA 487
Query: 424 LM--KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL---EKCRPNRTIYGIYL 478
+M + G++P + +Y ++ + N G + F+E L +P+ Y I L
Sbjct: 488 MMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILL 547
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
+L +I A ++ N M D+ + +CNI L+A
Sbjct: 548 RALCKQNSISHAIDLLNSML-DRGCNPDLITCNIFLNA 584
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 96/227 (42%), Gaps = 13/227 (5%)
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
+ K Q ++ G S++ A GD + + R+ F+ AY
Sbjct: 66 IFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAY 125
Query: 378 AKIGEFMKSLEIF-REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG---- 432
K K++E+F R + E +V +++ ++ ++ +E +L EF E G
Sbjct: 126 GKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVI--IQEGLFHRAL--EFYECGVGGK 181
Query: 433 --MKPLMPSYINLTNMYLNLGMHDRLHLAFSE-CLEKCRPNRTIYGIYLESLKNAGNIEK 489
+ P + S+ + LG+ DR F E ++KC P+ Y ++ L I++
Sbjct: 182 TNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDE 241
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
A + + M + ++ + N++++ GD V+ K+ D M LK
Sbjct: 242 AVLLLDEMQIEGCFP-SSVTFNVLINGLCKKGDMVRVTKLVDNMFLK 287
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
+F ++A K+G +++E+FREM + V Y +++ LCK + + L+ E
Sbjct: 190 SFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEM 249
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRL-HLAFSECLEKCRPNRTIYGIYLESLKNAGNI 487
G P ++ L N G R+ L + L+ C PN Y + L G +
Sbjct: 250 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 309
Query: 488 EKAEEIFNHMHSDQTI 503
+KA + + M + + +
Sbjct: 310 DKAVSLLDRMVASKCV 325
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 140/323 (43%), Gaps = 18/323 (5%)
Query: 162 TGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHIL 221
F ++E M++ + D A+ L + K + I + + + PS F +
Sbjct: 497 NAFSIFEEMLKS-GLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPI 555
Query: 222 IVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF 281
I + V G + A +I + +++ G P +N+L L+ K +++A
Sbjct: 556 IEGF---AVAGDMKRALNILD-LMRRSGCAPTVMTYNALIHGLIKK------NQVERAVS 605
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+ + + +G+ + Y+ I + Y N D + ++++ G + + ++LR
Sbjct: 606 VLNKMSIAGITPNEHTYT--IIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRA 663
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGS 399
C K G ++ A + S I FVY + + +A+ G+ ++ ++ ++M+E
Sbjct: 664 CCKSGRMQSALAVTREM--STQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVP 721
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
++ Y I CKA + + + +++E + G+KP + +Y L + + DR +
Sbjct: 722 PNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKS 781
Query: 460 FSEC-LEKCRPNRTIYGIYLESL 481
F E L +P+ Y + SL
Sbjct: 782 FEEMKLAGLKPDEAAYHCLVTSL 804
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 141/347 (40%), Gaps = 56/347 (16%)
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRAL--VSKP-----GGLSKYYLQQ-----AEFI 282
+EAC + R+++ RP ++ A + KP G + YY ++ A
Sbjct: 237 EEACREFRRVVE-----SRPEDWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARAT 291
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG--------------- 327
F N+ G+E +++ L+ H+Y D + +EM+ G
Sbjct: 292 FENMRARGIEPNAFVFTSLV--HAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIAGF 349
Query: 328 ------------FEEGKE--------VLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
F+E K + +++ + G+++ AE+ + E P
Sbjct: 350 AKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPI 409
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
A+ M Y I + K L +F ++E + S+ +Y +I L K + ++ KE
Sbjct: 410 DAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISKE 469
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGN 486
G+K +Y L + +++L F E L+ +P+R IY + +E+ GN
Sbjct: 470 MESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGN 529
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+++A I M ++ N R+ I+ + +GD +A I DLM
Sbjct: 530 MDRAIRILEKMQKERMQPSN-RAFRPIIEGFAVAGDMKRALNILDLM 575
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 107/289 (37%), Gaps = 45/289 (15%)
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
Q A+ +F ++ IYS +I H N+D R L +EM++ G + +
Sbjct: 356 QSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMD--RAEELVREMEEDGIDAPIDAYH 413
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK---MEAYAKIGEFMKSLEIFREM 393
S++ ++D +K + TP+ + + Y KIG+ K++ I +EM
Sbjct: 414 SMMHGYTI---IQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEM 470
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
+ + Y +I + S+ +E +++G++P Y L + +G
Sbjct: 471 ESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNM 530
Query: 454 DRL---------------HLAFSECLEK---------------------CRPNRTIYGIY 477
DR + AF +E C P Y
Sbjct: 531 DRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNAL 590
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
+ L +E+A + N M S I N + II+ Y ++GD KA
Sbjct: 591 IHGLIKKNQVERAVSVLNKM-SIAGITPNEHTYTIIMRGYAANGDIGKA 638
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 170/409 (41%), Gaps = 20/409 (4%)
Query: 128 GGTLVRILNAQKKW-LRQEDGTYLAVHCMRIRENET--GFRVYEWMMQQHWYRFDFALAT 184
G + R + KKW L+ TY + +R N + F VY +++ Y+ D
Sbjct: 206 GADVERCFDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVY-VELRRRGYKLDIFAYN 264
Query: 185 KLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM 244
L D + K+ K + +F D+ + P E T+ I+I ++ + G DE+ +++ M
Sbjct: 265 MLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMI--RMTGKI-GKADESLTLFQEM 321
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT--SGLEIQKDIYSGLI 302
+ GY P +N++ +AL + + + F+F ++ S + K IY+ L+
Sbjct: 322 TE-KGYTPNLIAYNTMIQALANN------RMVDKTIFLFSKMVVEVSNKFMNKSIYAYLV 374
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
S + + L M E ++ +S+L G +A ++ E
Sbjct: 375 RTLSKLGHASEAH--RLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKR 432
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
T + + A K+ + +++ +M++ S + +Y+ +I +A E
Sbjct: 433 ISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAV 492
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESL 481
+ +E + KP + S+ +L N G D H+ F E E+ P+ Y +E
Sbjct: 493 KIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECF 552
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+E A +F+ M + + N + NI+L SG +A +Y
Sbjct: 553 GKTDKVEMACRLFDEMLA-EGCSPNIVTYNILLDCLERSGRTAEAVDLY 600
>gi|449477323|ref|XP_004154991.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g18900-like [Cucumis sativus]
Length = 874
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 154/376 (40%), Gaps = 52/376 (13%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R+ ++ + W+ + +R D T + +G+ ++FA + D +I G P+
Sbjct: 355 RVDDHAVALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNV 414
Query: 216 MTFHILIVAYLSAPV-------------QGC-------------------LDEACSIYNR 243
+T++ +I +Y A GC LD A +Y +
Sbjct: 415 VTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEK 474
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M Q G P ++ + L K G +L A +F ++ G Y+ +I
Sbjct: 475 M-QDAGLTPDTFTYSVMINCL-GKAG-----HLNAAHRLFCRMVDEGCVPNLVTYNIMIA 527
Query: 304 LHSYQDNIDKERISL-LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
L + N + I+L L ++MQQ+GFE K V+ V G +E+AE ++ ++
Sbjct: 528 LQAKARNYE---IALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIE-MQKK 583
Query: 363 NGIPT-PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
N +P P + ++ + K G K+ E + M + +VP + ++ + +
Sbjct: 584 NWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDA 643
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESL 481
L++ + G+KP + +Y L + + +D + F C E + +L SL
Sbjct: 644 YQLLQSMLTFGLKPSLQTYTLLLSCCTDAQTND---MGF--CCELMQVTGHPAHTFLVSL 698
Query: 482 KNAGNIEKAEEIFNHM 497
+AG + + +HM
Sbjct: 699 PSAG--PNGQNVRDHM 712
>gi|449440748|ref|XP_004138146.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Cucumis sativus]
Length = 874
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 154/376 (40%), Gaps = 52/376 (13%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R+ ++ + W+ + +R D T + +G+ ++FA + D +I G P+
Sbjct: 355 RVDDHAVALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNV 414
Query: 216 MTFHILIVAYLSAPV-------------QGC-------------------LDEACSIYNR 243
+T++ +I +Y A GC LD A +Y +
Sbjct: 415 VTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEK 474
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M Q G P ++ + L K G +L A +F ++ G Y+ +I
Sbjct: 475 M-QDAGLTPDTFTYSVMINCL-GKAG-----HLNAAHRLFCRMVDEGCVPNLVTYNIMIA 527
Query: 304 LHSYQDNIDKERISL-LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
L + N + I+L L ++MQQ+GFE K V+ V G +E+AE ++ ++
Sbjct: 528 LQAKARNYE---IALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIE-MQKK 583
Query: 363 NGIPT-PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
N +P P + ++ + K G K+ E + M + +VP + ++ + +
Sbjct: 584 NWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDA 643
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESL 481
L++ + G+KP + +Y L + + +D + F C E + +L SL
Sbjct: 644 YQLLQSMLTFGLKPSLQTYTLLLSCCTDAQTND---MGF--CCELMQVTGHPAHTFLVSL 698
Query: 482 KNAGNIEKAEEIFNHM 497
+AG + + +HM
Sbjct: 699 PSAG--PNGQNVRDHM 712
>gi|242037185|ref|XP_002465987.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
gi|241919841|gb|EER92985.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
Length = 480
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 158/389 (40%), Gaps = 69/389 (17%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E+ ++E + +QHWY +L +GK R+ +F ++++ P+ +
Sbjct: 107 ESALEIFELLRKQHWYEPRSQTYARLLMMLGKCRQPGPAAALFKAMLSERLRPTADVYTA 166
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ AY G LDEA + +M G +P + F L++ ++ L A
Sbjct: 167 LVGAY---GYSGLLDEALAAVEQM--KGAADCKPDGYT--FSVLINCCAKSRRFDLIPA- 218
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQ---QAGFEEGKEV--- 334
+ + G+E I++ +I D K + + +EM+ A E G V
Sbjct: 219 -VLDEMSYLGIECNSVIHNAII------DGYGK---AAMFEEMEGALSAMLESGSNVPDI 268
Query: 335 --LLSVLRVCAKEGDVEDAEKTW----LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
+ SV+ G ++ EK++ L +E D T F +++Y K G + K +
Sbjct: 269 YTMNSVIGAYGNHGRTDEMEKSYSEFQLMGVEPD----TKTFNIMIKSYGKAGMYDKMMS 324
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
IFR M++R S + ++ +IE +A E E + G+KP +Y +L N Y
Sbjct: 325 IFRYMKKRFFSPTAVTFNTVIECFGRAGNIEKMEYYFRLMKIQGVKPNPITYCSLVNGYS 384
Query: 449 NLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTR 508
G+ D++ G I + E + + ++T
Sbjct: 385 KAGLLDKV---------------------------PGIIRQTE--------NTNVVLDTP 409
Query: 509 SCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
N ++SAY SGD E++ LM KK
Sbjct: 410 FFNCVISAYAKSGDIKIMEEMLQLMKEKK 438
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 157/338 (46%), Gaps = 24/338 (7%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + + K+ + + D++ +G VP+E+T++ +I ++G LD+A S+ +RM+
Sbjct: 248 LINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLC---LKGKLDKAVSLLDRMV 304
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
P + +L LV + + +L +L G + YS LI
Sbjct: 305 A-SKCVPNDVTYGTLINGLVKQGRSVDGVHL------LSSLEERGHHANEYAYSTLIS-G 356
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+++ +E + L KK M + G + V +++ +EG +++A++ ++ + G
Sbjct: 357 LFKEEKSEEAMGLWKK-MVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV--NKGC 413
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
AF Y ++ + K G K++ +++EM + + Y +I LC E+ +L E+
Sbjct: 414 TPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC--EDGKLREA 471
Query: 424 LM--KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL---EKCRPNRTIYGIYL 478
+M + G++P + +Y ++ + N G + F+E L +P+ Y I L
Sbjct: 472 MMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILL 531
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
+L +I A ++ N M D+ + +CNI L+A
Sbjct: 532 RALCKQNSISHAIDLLNSML-DRGCNPDLITCNIFLNA 568
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 96/227 (42%), Gaps = 13/227 (5%)
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
+ K Q ++ G S++ A GD + + R+ F+ AY
Sbjct: 50 IFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAY 109
Query: 378 AKIGEFMKSLEIF-REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG---- 432
K K++E+F R + E +V +++ ++ ++ +E +L EF E G
Sbjct: 110 GKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVI--IQEGLFHRAL--EFYECGVGGK 165
Query: 433 --MKPLMPSYINLTNMYLNLGMHDRLHLAFSE-CLEKCRPNRTIYGIYLESLKNAGNIEK 489
+ P + S+ + LG+ DR F E ++KC P+ Y ++ L I++
Sbjct: 166 TNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDE 225
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
A + + M + ++ + N++++ GD V+ K+ D M LK
Sbjct: 226 AVLLLDEMQIEGCFP-SSVTFNVLINGLCKKGDMVRVTKLVDNMFLK 271
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
+F ++A K+G +++E+FREM + V Y +++ LCK + + L+ E
Sbjct: 174 SFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEM 233
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRL-HLAFSECLEKCRPNRTIYGIYLESLKNAGNI 487
G P ++ L N G R+ L + L+ C PN Y + L G +
Sbjct: 234 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 293
Query: 488 EKAEEIFNHMHSDQTI 503
+KA + + M + + +
Sbjct: 294 DKAVSLLDRMVASKCV 309
>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
Length = 977
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 129/314 (41%), Gaps = 45/314 (14%)
Query: 160 NETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFH 219
N GF + W+ +Q ++ D T + +G+ ++F + D+++ G P+ +T++
Sbjct: 463 NALGF--FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN 520
Query: 220 ILIVAYLSAPV-------------QGC-------------------LDEACSIYNRMIQL 247
LI +Y A GC LD A +Y RM Q
Sbjct: 521 RLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QA 579
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
GG P ++ + L K G +L A +F ++ G Y+ ++ LH+
Sbjct: 580 GGLSPDTFTYSVIINCL-GKAG-----HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 633
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
N + L ++MQ AGFE K V+ V G +E+AE + ++ N IP
Sbjct: 634 ARNY--QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE-MQQKNWIPD 690
Query: 368 -PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
P + ++ + K G K+ + ++ M +VP + ++ + + L++
Sbjct: 691 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 750
Query: 427 EFVETGMKPLMPSY 440
+ G++P + +Y
Sbjct: 751 NMLALGLRPSLQTY 764
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 118/253 (46%), Gaps = 12/253 (4%)
Query: 286 LLTSGLEIQKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
++ G + Y+ LI HSY + N E +++ +MQ+AG + + +++ + AK
Sbjct: 507 MVRDGCQPNTVTYNRLI--HSYGRANYLNEAMNVFN-QMQEAGCKPDRVTYCTLIDIHAK 563
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASV 402
G ++ A + R+ G+ F Y + K G + ++F EM ++ + ++
Sbjct: 564 AGFLDIAMDMYQRM--QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 621
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
Y+ +++L KA + L ++ G +P +Y + + + G + F+E
Sbjct: 622 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 681
Query: 463 CLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHM-HSDQTIGVNTRSCNIILSAYLSS 520
+K P+ +YG+ ++ AGN+EKA + + M H+ + N +CN +LS +L
Sbjct: 682 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG--LRPNVPTCNSLLSTFLRV 739
Query: 521 GDFVKAEKIYDLM 533
+A ++ M
Sbjct: 740 NKIAEAYELLQNM 752
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 148/341 (43%), Gaps = 22/341 (6%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
R++FD + +G P+E TF IL+ Y A G + + +M +G P L+N+
Sbjct: 167 RELFDKMPARGCEPNEFTFGILVRGYCRA---GLASKGLELLGQMRTMG-ILPNNVLYNT 222
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI-WLHSYQDNIDKERISL 318
L + + AE + + GL + ++ I L ++ RI
Sbjct: 223 LISSFCKEG------KTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFR 276
Query: 319 LKKEMQQAGFEEGKEVL--LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEA 376
+ ++ G + L ++ C KEG +E+A+ + + N I ++ +
Sbjct: 277 DMQIDEELGLPHPNVITYKLMLMGFC-KEGMLEEAKTLVDTMKRNANFINLESYNIWLLG 335
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
+ G+ +++ + +EM + +Y+ +++ LCK LM + G+ P
Sbjct: 336 LIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPD 395
Query: 437 MPSYINLTNMYLNLG----MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
+Y L + Y + G ++ LH S C PN + L SL G I +AE
Sbjct: 396 TVTYSTLLHGYCSKGKVFEANNLLHEMISN---NCSPNTYTCNVLLHSLWKEGRISEAEN 452
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ M+ ++ GV+T +CNII++A ++G KA +I + M
Sbjct: 453 LLQKMN-EKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGM 492
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 68/363 (18%), Positives = 139/363 (38%), Gaps = 62/363 (17%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ D + K + R + +I G +P +T+ L+ Y S +G + EA ++ + MI
Sbjct: 367 VMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCS---KGKVFEANNLLHEMI 423
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKY--YLQQ------------AEFIFHNLLTSG- 290
P N L +L K G +S+ LQ+ I + L +G
Sbjct: 424 S-NNCSPNTYTCNVLLHSLW-KEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQ 481
Query: 291 LEIQKDIYSGLIWLHSYQ--DNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
L+ +I +G+ W H N+ I L+ + +++ K G +
Sbjct: 482 LDKAIEIVNGM-WTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRL 540
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQER---------- 396
+DA+K ++ ++ G+ + +Y + ++ + G+ + ++ ++M++R
Sbjct: 541 DDAKKKFIEMMSK--GLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYN 598
Query: 397 -----LGSAS--------------------VPAYHKIIELLCKAEETELTESLMKEFVET 431
LGS + V Y+ ++ LC+ S++ E ++
Sbjct: 599 SLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQK 658
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAE 491
G+ P + S+ L + H F L C +Y + L G + +A+
Sbjct: 659 GISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAK 718
Query: 492 EIF 494
E+F
Sbjct: 719 ELF 721
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 121/278 (43%), Gaps = 13/278 (4%)
Query: 158 RENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMT 217
R + GFR+ + M + Y F + L + KE + +FD++ +G P+ +T
Sbjct: 272 RNLDEGFRLKKTMEENRIYPDVFTYSV-LIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
F LI + +D A + Y++M+ +G +P ++N+L L K G ++K
Sbjct: 331 FTALIDGQYRSRR---MDSAMNTYHQMLTMG-VKPDLVMYNTLLNGLC-KVGDVNK---- 381
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
A + + G++ K Y+ LI Y D E ++K M + G +
Sbjct: 382 -ARKLVDEMKMVGMKPDKITYTTLI--DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 438
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
++ ++G V DAE+T ++E+ + ++ Y K G ++ +EMQ
Sbjct: 439 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 498
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
V Y+ ++ LCK + + L++ + G+ P
Sbjct: 499 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTP 536
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 113/283 (39%), Gaps = 16/283 (5%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P T+ +LI +G LD A +++ M Q G RP + F AL+ G
Sbjct: 291 PDVFTYSVLIHGLCK---EGRLDVAEQLFDEMQQRG---LRP--NGITFTALID--GQYR 340
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ A +H +LT G++ +Y+ L+ +++K R L EM+ G + K
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKAR--KLVDEMKMVGMKPDK 398
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
+++ KEGD+E A + + E + AF + + + G + RE
Sbjct: 399 ITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLRE 458
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
M E Y +I+ CK ++ L+KE G KP + +Y L N G
Sbjct: 459 MVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQ 518
Query: 453 HDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
++ L P+ Y I LE G KAE++
Sbjct: 519 MKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLL 558
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 85/211 (40%), Gaps = 6/211 (2%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
E+ + GF + ++ KEG + DA+ + + + T +F + K
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ + + M+E V Y +I LCK ++ E L E + G++P ++
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332
Query: 442 NLTN-MYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
L + Y + M ++ +P+ +Y L L G++ KA ++ + M
Sbjct: 333 ALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM--- 389
Query: 501 QTIGV--NTRSCNIILSAYLSSGDFVKAEKI 529
+ +G+ + + ++ Y GD A +I
Sbjct: 390 KMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 185/450 (41%), Gaps = 62/450 (13%)
Query: 124 PSHKGGTLVRILNAQKKWLRQ----EDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFD 179
PS G + +L +KW Q ED YL E E + YEWM+QQ R +
Sbjct: 141 PSMSGNSTALLL---EKWSHQLVGLEDFPYLLRELGNRGEWERALQGYEWMVQQGHLRSE 197
Query: 180 FA-LATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
++ LA+ + +G+ K D+F+ G + + ++ AY + G EA
Sbjct: 198 WSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRS---GRCREAL 254
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
++ M + G +P +N++ A GG+ L++A IF + G+E + +
Sbjct: 255 KVFQAM-KKAGCKPNLITYNTIIDA--CGKGGVD---LKKALDIFEEMQKEGVEPDRITF 308
Query: 299 SGLIWLHSYQDNI-DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK---- 353
+ LI + S D +R+ EMQ+ G E+ +++ K G +E A
Sbjct: 309 NSLIAVCSRGSLWEDSQRVF---AEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSS 365
Query: 354 -----------TWLRLLES------------------DNGIPTPAFVYK--MEAYAKIGE 382
T+ +++ ++G+ Y ++ YAK+G
Sbjct: 366 MRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGR 425
Query: 383 FMKSLEIFREMQERLG-SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
F +L ++M ER+G A V Y+ +I+ K + + L + G+ P + +Y
Sbjct: 426 FDDALTACKDM-ERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYS 484
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
L + Y GMH F E +P+ +Y ++S G +E A + M +
Sbjct: 485 ALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEM-TQ 543
Query: 501 QTIGVNTRSCNIILSAYLSSG--DFVKAEK 528
I N + N ++ AY +G D V+A K
Sbjct: 544 AGIQPNIVTYNSLIDAYGRNGQVDNVEAAK 573
>gi|326522967|dbj|BAJ88529.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 166/429 (38%), Gaps = 96/429 (22%)
Query: 131 LVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFR--------VYEWMMQQHWYRFDFAL 182
LV +L+ K +R E HC + E E G R ++ WM +Q WY D +
Sbjct: 73 LVSVLDRHVKVVRTE-------HCFLLFE-ELGRRDGWVQCLEIFRWMQKQRWYVADNGI 124
Query: 183 ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYL-SAPVQGCLDEACSIY 241
+KL MG++ + +F + N G P ++ LI A+L S L +A +
Sbjct: 125 YSKLISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKSKALVKALGYF 184
Query: 242 NRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
++M + QP +N L RA +Q + +F +L S + DIY
Sbjct: 185 DKMKGMERCQPNIVTYNILLRACARASD------TKQVDILFKDLDES--IVSPDIY--- 233
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
+Y ID G+ K G + + E +R+
Sbjct: 234 ----TYNGVID--------------GY--------------GKNGMITEMESVLVRMKSK 261
Query: 362 DNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
F +++Y + F K ++F+ + + P ++ +I KA E
Sbjct: 262 QCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGKARLREKA 321
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESL 481
ES++++ E G KP + L NMY A+ +C
Sbjct: 322 ESVIEKMQELGFKPNYVTQECLINMY-----------AYCDC------------------ 352
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIE 541
+ KA++IF+ + S Q+ V S N +L AY + ++A+++ D ++K +
Sbjct: 353 -----VSKAQQIFDELVSSQST-VPLSSLNAMLDAYCMNRLPMEADRLLD-TAIEKGVVP 405
Query: 542 SAWMEKLDY 550
SA KL Y
Sbjct: 406 SASTYKLLY 414
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 186/428 (43%), Gaps = 48/428 (11%)
Query: 178 FDFALAT----KLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGC 233
++FAL + + +YMG+ ++ ++ G +P +T++ +I +Y +G
Sbjct: 36 YNFALRSLARFDMTEYMGR---------VYSQLVQDGLLPDTVTYNTMIKSYCK---EGD 83
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
L A Y R++ GG +P N+L G L++A ++F L+ +
Sbjct: 84 LTTA-HRYFRLLLEGGLEPETFTCNALVL------GYCRTGELRKACWLF--LMMPLMGC 134
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
Q++ YS I + D + +L M++ G ++ K G V DA
Sbjct: 135 QRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA-- 192
Query: 354 TWLRLL---ESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVP-AYHK 407
RLL NG+ Y + Y+K+G +L+I +E+ E+ G Y+
Sbjct: 193 ---RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNGCHPDDWTYNT 248
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY-LNLGMHDRLHLAFSECLEK 466
+I LC ++TE E L+ V+ G P + ++ NL N Y + D L + K
Sbjct: 249 LIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSK 307
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
C+ + ++G + SL +++A+E+ N + ++ + N + I+ Y SG A
Sbjct: 308 CKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVP-NVITYTSIIDGYCKSGKVDIA 366
Query: 527 EKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLI------GLLL 580
++ +M + + L Y L + K++ K ++L L+ Q++ +I LL
Sbjct: 367 LEVLKMMERDGCQPNAWTYNSLMYGL-VKDKKLHKAMAL-LTKMQKDGIIPNVITYTTLL 424
Query: 581 GGLCIESD 588
G C E D
Sbjct: 425 QGQCDEHD 432
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 142/348 (40%), Gaps = 22/348 (6%)
Query: 153 HCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRV 212
+CM + ++ R+ MM + D + KL + + K+ + + +++ ++I G V
Sbjct: 287 YCMAEKFDD-ALRMKNKMMSSKC-KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLV 344
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ +T+ +I Y + G +D A + +M++ G QP +NSL LV
Sbjct: 345 PNVITYTSIIDGYCKS---GKVDIALEVL-KMMERDGCQPNAWTYNSLMYGLVKDKK--- 397
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
L +A + + G+ Y+ L L D D + L + M+Q G + +
Sbjct: 398 ---LHKAMALLTKMQKDGIIPNVITYTTL--LQGQCDEHDFDNAFRLFEMMEQNGLKPDE 452
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIF 390
+ K G E+A +R G+ Y ++ ++K G + +
Sbjct: 453 HAYAVLTDALCKAGRAEEAYSFIVR-----KGVALTKVYYTTLIDGFSKAGNTDFAATLI 507
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
M + + Y ++ LCK + ++ + G+K + +Y L + L
Sbjct: 508 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLRE 567
Query: 451 GMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
G HD ++E +P+ T Y +++ S G +E AE++ M
Sbjct: 568 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKM 615
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 138/325 (42%), Gaps = 20/325 (6%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
MM++ + T L + K + R +FD + G VPS MT++ +IV Y
Sbjct: 163 MMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKL- 221
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
G +++A I +++ G P +N+L GL ++AE + +N +
Sbjct: 222 --GRMNDALKI-KELMEKNGCHPDDWTYNTLIY-------GLCDQKTEEAEELLNNAVKE 271
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
G ++ LI + + D +K +M + + +V ++ K+ ++
Sbjct: 272 GFTPTVVTFTNLINGYCMAEKFDDAL--RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLK 329
Query: 350 DAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
+A++ + S NG+ Y ++ Y K G+ +LE+ + M+ + Y+
Sbjct: 330 EAKELLNEI--SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 387
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK- 466
++ L K ++ +L+ + + G+ P + +Y L + D F E +E+
Sbjct: 388 LMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF-EMMEQN 446
Query: 467 -CRPNRTIYGIYLESLKNAGNIEKA 490
+P+ Y + ++L AG E+A
Sbjct: 447 GLKPDEHAYAVLTDALCKAGRAEEA 471
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 184/442 (41%), Gaps = 49/442 (11%)
Query: 155 MRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
+R + +T F V+ M +R D L + K +C D + + VP
Sbjct: 216 LRADKLDTAFLVHREM-SNSGFRMD---GCTLGCFAYSLCKAGRCGDALSLLEKEEFVPD 271
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY 274
+ ++ ++ A + EA I +RM + P++ +R L+S G L K
Sbjct: 272 TVFYNRMVSGLCEASL---FQEAMDILDRMRSISCI---PNVVT--YRILLS--GCLGKG 321
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
L + + I ++T G +++++ L+ H+Y + D L K+M + G + G +
Sbjct: 322 QLGRCKRILSMMMTEGCYPNREMFNSLV--HAYCKSRDYSYAYKLFKKMIKCGCQPGYLL 379
Query: 335 L-LSVLRVCAKE---GD--VEDAEKTWLRLLESD---NGIPTPAFVYKMEAYAKIGEFMK 385
+ + +C+ E G +E AEK + +L+ N + F G+F K
Sbjct: 380 YNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFA---RCLCGAGKFDK 436
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+ EI EM + Y K+I LC A + E L +E + G+ P + +Y L +
Sbjct: 437 AFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILID 496
Query: 446 MYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
+ G+ + F E L + C PN Y + + A + A ++F M + +
Sbjct: 497 SFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGS-K 555
Query: 505 VNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVS 564
N + ++ + +G KA +IY M + +IES+ +D L+ + + P
Sbjct: 556 PNVVTYTALIDGHCKAGQIDKACQIYARM---QGDIESS---DIDMYFKLDDNDCETP-- 607
Query: 565 LNLSSEQRENLI--GLLLGGLC 584
N+I G L+ GLC
Sbjct: 608 ---------NIITYGALVDGLC 620
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 139/327 (42%), Gaps = 21/327 (6%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L D K + R+ FD+++ P+ +T+ LI AYL A + +A ++
Sbjct: 492 TILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARK---VFDANKLFEM 548
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSK----YYLQQAEF------IFHNLLTSGLEI 293
M+ L G +P + +L K G + K Y Q + ++ L + E
Sbjct: 549 ML-LEGSKPNVVTYTALIDGHC-KAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCET 606
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
I G + + N +E LL M G E + V +++ K G +E+A++
Sbjct: 607 PNIITYGALVDGLCKANRVEEAHELLDT-MSVNGCEPNQIVYDALIDGFCKTGKLENAQE 665
Query: 354 TWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
++++ S+ G + Y + + K L++ +M E + +V Y +I+
Sbjct: 666 VFVKM--SERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDG 723
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPN 470
LCK +TE LM + E G P + +Y + + + +G + L L C + C PN
Sbjct: 724 LCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPN 783
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHM 497
Y + + + G +++A + + M
Sbjct: 784 FITYRVLINHCCSTGLLDEAHRLLDEM 810
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 147/367 (40%), Gaps = 62/367 (16%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM---IQLG 248
K RK +F+ ++ +G P+ +T+ LI + A G +D+AC IY RM I+
Sbjct: 535 KARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKA---GQIDKACQIYARMQGDIESS 591
Query: 249 GYQPRPSLHNS--------LFRALVSKPGGLSKYY-LQQAEFIFHNLLTSGLEIQKDIYS 299
L ++ + ALV GL K +++A + + +G E + +Y
Sbjct: 592 DIDMYFKLDDNDCETPNIITYGALVD---GLCKANRVEEAHELLDTMSVNGCEPNQIVYD 648
Query: 300 GLI--------------------------WLHSYQDNID----KERISLLKK---EMQQA 326
LI L++Y I+ ++R+ L+ K +M +
Sbjct: 649 ALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLEN 708
Query: 327 GFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKS 386
+ ++ K G E+A + L++ E + ++ + KIG+ +
Sbjct: 709 SCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQC 768
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNM 446
LE++R+M + + + Y +I C + L+ E +T + SY +
Sbjct: 769 LELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEG 828
Query: 447 Y-----LNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQ 501
+ ++G+ D L SE + P ++Y I +++ AG +E A + + S
Sbjct: 829 FNREFITSIGLLDEL----SE--NESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSP 882
Query: 502 TIGVNTR 508
++ V +
Sbjct: 883 SLAVANK 889
>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 147/350 (42%), Gaps = 19/350 (5%)
Query: 188 DYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL 247
D + +E K F ++ +GR P +++ ILI A G + +A I+N MI+
Sbjct: 122 DLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRA---GKVTDAVEIWNAMIRS 178
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
G S N ALV K L E + + ++ +++ +Y+ LI
Sbjct: 179 G-----VSPDNKACAALVVGLCHARKVDLAY-EMVAEEIKSARVKLSTVVYNALISGFCK 232
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
I E+ LK M + G E +L ++ AE ++ S GI
Sbjct: 233 AGRI--EKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS--GIQL 288
Query: 368 PAFVYK--MEAYAKIGEFMKSLE-IFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
A+ Y ++ + ++ K + +EM+ R G V +Y +IE C+A T L
Sbjct: 289 DAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPR-GFCDVVSYSTLIETFCRASNTRKAYRL 347
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKN 483
+E + GM + +Y +L +L G + E P+R Y L+ L
Sbjct: 348 FEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK 407
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+GN++KA +FN M + I + S N ++S SG +A K+++ M
Sbjct: 408 SGNVDKAYGVFNDM-IEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 155/380 (40%), Gaps = 30/380 (7%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFD--DIINQGRVPSEMTF 218
+ GFRV + M + + F + A + KE ++A D+ + D + + M
Sbjct: 226 DLGFRVQKEMSESGFCMDRFTVGC-FAHALCKEGRWADALDMIEREDFKLDTVLCTHMIS 284
Query: 219 HILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL-FRALVSKPGGLSKYYLQ 277
++ +Y DEA S +RM + + N + +R L+S G L K L
Sbjct: 285 GLMEASYF--------DEAMSFLHRM------RCNSCIPNVVTYRTLLS--GFLKKKQLG 328
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL-L 336
+ I + ++T G +++ L+ HSY + D L M G G V +
Sbjct: 329 WCKRIINMMMTEGCNPNPSLFNSLV--HSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNI 386
Query: 337 SVLRVCAKEG----DVED-AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFR 391
+ +C +E D+ D AEK + +L ++ + +G+F K+ ++ +
Sbjct: 387 FIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIK 446
Query: 392 EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
EM + Y K+I LC A + E L +E G+ P + +Y L + + G
Sbjct: 447 EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG 506
Query: 452 MHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC 510
+ ++ F E C P Y + + A + +A +IF+ M D N +
Sbjct: 507 LIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM-VDAGCRPNDVTY 565
Query: 511 NIILSAYLSSGDFVKAEKIY 530
++ +G+ KA ++Y
Sbjct: 566 GALVDGLCKAGNISKAFEVY 585
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 100/233 (42%), Gaps = 20/233 (8%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG-- 249
K ++ + DIF +++ G P+++T+ L+ A G + +A +Y ++I
Sbjct: 539 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA---GNISKAFEVYAKLIGTSDSA 595
Query: 250 ----YQPRPSLHN-----SLFRALVSKPGGLSKYY-LQQAEFIFHNLLTSGLEIQKDIYS 299
Y P H + ALV GL K + + A + +L+SG E +Y
Sbjct: 596 DSDFYFPCEDRHTLAPNVVTYGALVD---GLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 652
Query: 300 GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
LI ID + L +M + G+ S++ K+G ++ A K ++L
Sbjct: 653 ALIDGFCKAGKIDSAQEVFL--QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 710
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+ + ++ +IGE K+L++ M+E+ S +V Y +I+ L
Sbjct: 711 KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 108/258 (41%), Gaps = 24/258 (9%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F+++ + G P+ +T+ LI AYL A + +A I++RM+ G +P + +L
Sbjct: 514 LFEEMRSVGCSPTVVTYTALIHAYLKAKQ---VPQANDIFHRMVD-AGCRPNDVTYGALV 569
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI---------- 311
L K G +SK + ++ L+ + D Y H+ N+
Sbjct: 570 DGLC-KAGNISKAFE-----VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGL 623
Query: 312 ----DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+ L M +G E V +++ K G ++ A++ +L++ +
Sbjct: 624 CKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSV 683
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
+ ++ K G ++++ +M + + +V Y +I+ LC+ E+E L+
Sbjct: 684 HTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSL 743
Query: 428 FVETGMKPLMPSYINLTN 445
E G P + +Y L +
Sbjct: 744 MEEKGCSPNVVTYTALID 761
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 127/350 (36%), Gaps = 33/350 (9%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA- 228
MM + +L L E+ +A + + + G P + ++I I +
Sbjct: 336 MMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQE 395
Query: 229 --PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNL 286
P LD A IY M+ + ++ N R L G+ K+ +A + +
Sbjct: 396 KLPSPDLLDLAEKIYGEMLAANCVLNKVNVAN-FARCLC----GVGKF--DKAFQLIKEM 448
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEG 346
+ G YS +I + + E+ LL +EM+ G ++ K G
Sbjct: 449 MRKGFVPDTSTYSKVITFLCHATKV--EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG 506
Query: 347 DVEDAEKTWL-RLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
+E A+ WL + S PT + + AY K + ++ +IF M + +
Sbjct: 507 LIEQAQ--WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVT 564
Query: 405 YHKIIELLCKAEETELTESLMKEFVETG----------------MKPLMPSYINLTNMYL 448
Y +++ LCKA + + + T + P + +Y L +
Sbjct: 565 YGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLC 624
Query: 449 NLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
D H L C PN +Y ++ AG I+ A+E+F M
Sbjct: 625 KAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 674
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 123/328 (37%), Gaps = 29/328 (8%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K+++ C+ I + ++ +G P+ F+ L+ +Y + A + NRM G
Sbjct: 323 KKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYA---YAYKLLNRMTTCG-CP 378
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P ++N ++ + S L AE I+ +L + + K +
Sbjct: 379 PGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 438
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN-GIPTPAF 370
DK L KEM + GF V+ VE K +L E G+ +
Sbjct: 439 DKA--FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVE---KAFLLFQEMKMVGVTPDVY 493
Query: 371 VYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
Y + +++ K G ++ +F EM+ S +V Y +I KA++ +
Sbjct: 494 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 553
Query: 429 VETGMKPLMPSYINLTN-------------MYLNL-GMHDRLHLAF---SECLEKCRPNR 471
V+ G +P +Y L + +Y L G D F E PN
Sbjct: 554 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 613
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHS 499
YG ++ L A ++ A E+ + M S
Sbjct: 614 VTYGALVDGLCKAHKVDHAHELLDAMLS 641
>gi|357457245|ref|XP_003598903.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487951|gb|AES69154.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 767
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 164/418 (39%), Gaps = 49/418 (11%)
Query: 150 LAVHCMRIRENET-GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIIN 208
L ++++ N T F+ + W+ +Q Y +FA + + F + + +
Sbjct: 123 LVAEVLKVQTNPTLAFKFFHWVEKQKGYHHNFASYNAFTYCLNRANHFRAADQLPELMDA 182
Query: 209 QGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKP 268
QG+ PSE F ILI + A G +Y++M G +PR L+N + ALV K
Sbjct: 183 QGKPPSEKQFEILIRMHSDA---GRGLRVYHVYDKMRNKFGVKPRVFLYNRIMDALV-KT 238
Query: 269 GGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
G +L A ++++ GL + + LI ID E + +L + M++
Sbjct: 239 G-----HLDLALSVYNDFREDGLVEESVTFMILIKGLCKGGKID-EMLEVLGR-MREKLC 291
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
+ +++R+ KEG+++ + W + A+ + AK G + E
Sbjct: 292 KPDVFAYTALVRIMVKEGNLDGCLRVWKEMKRDRVDPDVMAYGTIIGGLAKGGRVSEGYE 351
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+F+EM+ + Y ++E + L L+K+ V +G + + Y NL
Sbjct: 352 LFKEMKSKGHLIDRAIYGSLVESFVAGNKVGLAFDLLKDLVSSGYRADLGMYNNLIEGLC 411
Query: 449 NLGMHDRLHLAFSECLEK--------CRPNRTIYG---------IYLESLKNAG------ 485
NL ++ + F +++ +P Y + LE +K G
Sbjct: 412 NLNKVEKAYKLFQVTIQEGLEPDFLSVKPLLLAYAEAKRMEEFFMLLEKMKKLGFPVIDD 471
Query: 486 ------------NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
E A EIF H+ + V NI + + SG KA ++D
Sbjct: 472 LSKFFSHLVEKKGPEMALEIFTHLKEKSYVSVEIY--NIFMESLHLSGKVEKALSLFD 527
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 20/283 (7%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL---- 247
K ++ + DIF+ +I+ G P+ +T+ L+ A G + +AC +Y ++I
Sbjct: 370 KAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKA---GEIQKACEVYTKLIGTSDNV 426
Query: 248 -------GGYQPRPSLHNSLFRALVSKPGGLSKYY-LQQAEFIFHNLLTSGLEIQKDIYS 299
G + + + + AL+ GL K + + A+ + +L++G E IY
Sbjct: 427 GSDFYFEGKHTDSIAPNVVTYGALID---GLCKAHKVVDAQELLDAMLSNGCEPNHIIYD 483
Query: 300 GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
LI ID + L+ M + G+ S++ K+ ++ A K +++
Sbjct: 484 ALIDGFCKVGKIDNAQEVFLR--MSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMV 541
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
ES + ++ +IGE K+L++ M+E+ S +V Y +I+ L K+ + +
Sbjct: 542 ESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVD 601
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
L+ L + G P +Y L N G+ D H SE
Sbjct: 602 LSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSE 644
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 136/329 (41%), Gaps = 25/329 (7%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L D K + R FD++ + G + +T+ L+ AYL A L +A I+NR
Sbjct: 327 TILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQ---LPQASDIFNR 383
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY----- 298
MI G P +++L L K G +Q+A ++ L+ + + D Y
Sbjct: 384 MID-AGCPPNTITYSALVDGLC-KAG-----EIQKACEVYTKLIGTSDNVGSDFYFEGKH 436
Query: 299 -----SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKE----VLLSVLRVCAKEGDVE 349
++ + D + K + +E+ A G E + +++ K G ++
Sbjct: 437 TDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKID 496
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
+A++ +LR+ + + ++A K ++++ +M E + +V Y +I
Sbjct: 497 NAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMI 556
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD-RLHLAFSECLEKCR 468
+ LC+ E + L+ E G P + +Y L + G D L L + C
Sbjct: 557 DGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCA 616
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
PN Y + + AG +++A + + M
Sbjct: 617 PNYVTYRVLINHCCAAGLLDEAHSLLSEM 645
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 128/311 (41%), Gaps = 31/311 (9%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSL-FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLE 292
DEA S +RM + + N + +R L++ G L K L + I + ++ G
Sbjct: 123 FDEAISFLHRM------RCNSCIPNVVTYRTLLT--GFLKKKQLGWCKRIINMMMKEGCN 174
Query: 293 IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL-LSVLRVCAKE-----G 346
+++ L+ HSY + D L K M G G + + +C E
Sbjct: 175 PNPSLFNSLV--HSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPD 232
Query: 347 DVEDAEKTWLRLLESD---NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP 403
+ AEK + +L S N + T F +G+F + +I + M +G VP
Sbjct: 233 LLALAEKVYEEMLASSCVLNKVNTANFA---RCLCGMGKFDMAFQIIKVM---MGKGFVP 286
Query: 404 ---AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
Y K+I LC+A + E L +E G+ P + +Y L + + G+ ++ F
Sbjct: 287 DTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWF 346
Query: 461 SECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
E C N Y L + A + +A +IFN M D NT + + ++
Sbjct: 347 DEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRM-IDAGCPPNTITYSALVDGLCK 405
Query: 520 SGDFVKAEKIY 530
+G+ KA ++Y
Sbjct: 406 AGEIQKACEVY 416
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 117/295 (39%), Gaps = 36/295 (12%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYN- 242
T L D M K+R+ + ++ P+ +T+ +I D C I
Sbjct: 518 TSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMI------------DGLCRIGEC 565
Query: 243 -------RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQK 295
M++ G P + +L L G K L FI + T G
Sbjct: 566 QKALKLLSMMEEKGCSPNVVTYTALIDGL----GKSGKVDLSLQLFI--QMSTKGCAPNY 619
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
Y LI H + E SLL EM+Q + + + SV++ +K+ A
Sbjct: 620 VTYRVLIN-HCCAAGLLDEAHSLLS-EMKQTYWPKYLQGYCSVVQGFSKK---FIASLGL 674
Query: 356 LRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA---YHKIIEL 411
L LES +P P + ++ ++K G ++LE+ +EM E S ++ + Y +I+
Sbjct: 675 LEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQA 734
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM-HDRLHLAFSECLE 465
LC A + E L E G+ P + ++ L + + ++ L L +S C E
Sbjct: 735 LCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDE 789
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/240 (19%), Positives = 86/240 (35%), Gaps = 56/240 (23%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+++A +F + + G + D+Y+ I + S+ E+ EM+ G
Sbjct: 304 VEKAFLLFQEMKSVG--VNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTY 361
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM 393
++L K + A + R++ D G P Y ++ K GE K+ E++ ++
Sbjct: 362 TALLHAYLKAKQLPQASDIFNRMI--DAGCPPNTITYSALVDGLCKAGEIQKACEVYTKL 419
Query: 394 ---QERLGS-------------ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
+ +GS +V Y +I+ LCKA + + L+ + G
Sbjct: 420 IGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNG----- 474
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
C PN IY ++ G I+ A+E+F M
Sbjct: 475 -----------------------------CEPNHIIYDALIDGFCKVGKIDNAQEVFLRM 505
>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 129/314 (41%), Gaps = 45/314 (14%)
Query: 160 NETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFH 219
N GF + W+ +Q ++ D T + +G+ ++F + D+++ G P+ +T++
Sbjct: 346 NALGF--FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN 403
Query: 220 ILIVAYLSAPV-------------QGC-------------------LDEACSIYNRMIQL 247
LI +Y A GC LD A +Y RM Q
Sbjct: 404 RLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QA 462
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
GG P ++ + L K G +L A +F ++ G Y+ ++ LH+
Sbjct: 463 GGLSPDTFTYSVIINCL-GKAG-----HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
N + L ++MQ AGFE K V+ V G +E+AE + ++ N IP
Sbjct: 517 ARNY--QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE-MQQKNWIPD 573
Query: 368 -PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
P + ++ + K G K+ + ++ M +VP + ++ + + L++
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Query: 427 EFVETGMKPLMPSY 440
+ G++P + +Y
Sbjct: 634 NMLALGLRPSLQTY 647
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 119/257 (46%), Gaps = 12/257 (4%)
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ ++ G + Y+ LI HSY + N E +++ +MQ+AG + + +++
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLI--HSYGRANYLNEAMNVFN-QMQEAGCKPDRVTYCTLID 442
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLG 398
+ AK G ++ A + R+ G+ F Y + K G + ++F EM ++
Sbjct: 443 IHAKAGFLDIAMDMYQRM--QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC 500
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
+ ++ Y+ +++L KA + L ++ G +P +Y + + + G +
Sbjct: 501 TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEA 560
Query: 459 AFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHM-HSDQTIGVNTRSCNIILSA 516
F+E +K P+ +YG+ ++ AGN+EKA + + M H+ + N +CN +LS
Sbjct: 561 VFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG--LRPNVPTCNSLLST 618
Query: 517 YLSSGDFVKAEKIYDLM 533
+L +A ++ M
Sbjct: 619 FLRVNKIAEAYELLQNM 635
>gi|302816774|ref|XP_002990065.1| hypothetical protein SELMODRAFT_130980 [Selaginella moellendorffii]
gi|300142185|gb|EFJ08888.1| hypothetical protein SELMODRAFT_130980 [Selaginella moellendorffii]
Length = 458
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 164/403 (40%), Gaps = 34/403 (8%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E +V+E + Q WY+ +L + +GK ++ + +F ++ G PS F
Sbjct: 38 EAALKVFELLRSQQWYQPYAGTYIRLLEMLGKCKRPDEAASLFQTMLADGCGPSREAFTA 97
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ AY + + + A + M P ++ L ++ G LS+ A
Sbjct: 98 LMSAYTRSNL---MSTAMEVLQAMNATPHCSPDVFTYSLLIKSCCDC-GQLSR-----AS 148
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS--- 337
+ ++ G++ + Y+ I L +Y + +++ L +M Q+ + S
Sbjct: 149 DLLADMTARGIQPNRVTYN--IILDAYAKSGSLDKLHDLALQMLQSPSPSCRPDHWSRNA 206
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
+++ GD+ E+ + RL +G + M AYAK F K + R +
Sbjct: 207 IVKGFGNRGDIRRMEEWFQRLTTPSDGPDSLTLHSLMAAYAKAEMFDKMHAVVRYIHRYH 266
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVET---GMKPLMPSYINLTNMYLNLGMHD 454
Y+ +I +A ++K F G++P +Y L N Y GM
Sbjct: 267 YQVDAVTYNILINAYGRAGR---KTQMLKTFTSMKCGGVRPDSVTYCTLINFYGKFGMQR 323
Query: 455 RLHLAFSE-CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
+L + + K +P+ +Y L++ + A +I + F M +Q + + NI+
Sbjct: 324 KLPRLLEQMSMHKVQPDTALYNSVLDAYRRASDISSIDRYFAAMQ-EQGCKPDHLTYNIL 382
Query: 514 LSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNR 556
+ AY S G KA D+M +++ EKL S+NR
Sbjct: 383 IQAYRSQGLTDKA----DVMAVEQ--------EKLKQRDSINR 413
>gi|326490553|dbj|BAJ84940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 856
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 108/233 (46%), Gaps = 7/233 (3%)
Query: 304 LHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+H+Y + N +E + + + EM+ AG++ + +++ + AK G +E A + R+ E
Sbjct: 405 IHAYGRANYLREAVKVFE-EMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEV- 462
Query: 363 NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
G+ F Y + K G+ + ++F EM + + ++ Y+ II L KA +
Sbjct: 463 -GLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDN 521
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLES 480
L ++ G +P +Y + + + G D F E P+ +YG+ ++
Sbjct: 522 VVKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMRRDWAPDEPVYGLLVDL 581
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
AGN++KA ++ M D + N +CN +LSA+L F A + M
Sbjct: 582 WGKAGNVDKALGWYHAMLQD-GLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNM 633
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 127/326 (38%), Gaps = 47/326 (14%)
Query: 173 QHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQG 232
+H + D + T L + AK ++F D+ G P+ T+ I+I + G
Sbjct: 240 KHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRC---G 296
Query: 233 CLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLE 292
+ A +++ MI G P NSL R V G ++ LQ +++ + G
Sbjct: 297 QITRAHDVFSEMID-AGCDPNAVTFNSLMRVHVK--AGRTEKVLQ----VYNQMKRLGCA 349
Query: 293 IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
Y+ LI H +N+D E + +L M + G S+ A+ DV A
Sbjct: 350 ADTISYNFLIESHCKDENLD-EAVKVLDT-MVKKGVAPNASTFNSIFGCIAELHDVNGAH 407
Query: 353 KTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+ + ++ E T + M +A L++ +EM E +V Y +I +
Sbjct: 408 RMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMF 467
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNR 471
C+ +LMKE VE EKC +PN
Sbjct: 468 CEKGHWNNAYNLMKEMVE----------------------------------EKCLKPNL 493
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHM 497
+IY LE L+NAG ++K EE+ M
Sbjct: 494 SIYETVLELLRNAGQLKKHEELVEKM 519
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 151/362 (41%), Gaps = 27/362 (7%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
++ D GK R F + D + ++G + TF +L+ Y+ A G EA +NR
Sbjct: 147 NEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRA---GLAAEAVHAFNR 203
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M G + S F ++S K +AE F +L E +Y+ L+
Sbjct: 204 MEDYGCKPDKVS-----FSIVIS--SLCKKRRASEAELFFDSL-KHKFEPDVIVYTSLV- 254
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
H + D + + +M++AG + V+ + G + A + ++++
Sbjct: 255 -HGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGC 313
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELLCKAEETELTE 422
F M + K G K L+++ +M+ RLG +A +Y+ +IE CK E +
Sbjct: 314 DPNAVTFNSLMRVHVKAGRTEKVLQVYNQMK-RLGCAADTISYNFLIESHCKDENLDEAV 372
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESL 481
++ V+ G+ P ++ ++ L + H +++ E KC PN Y I +
Sbjct: 373 KVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMF 432
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM-------C 534
++ +I+ ++ M + + N + I++ + G + A Y+LM C
Sbjct: 433 ADSKSIDMVLKLKKEM-DESEVEPNVNTYRILILMFCEKGHWNNA---YNLMKEMVEEKC 488
Query: 535 LK 536
LK
Sbjct: 489 LK 490
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/207 (18%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ + + G+ K+ E+F +M+E +V Y +I+ LC+ + + E ++ G
Sbjct: 254 VHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGC 313
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEE 492
P ++ +L +++ G +++ +++ C + Y +ES N+++A +
Sbjct: 314 DPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVK 373
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY----DLMCLKKYEIESAWM--- 545
+ + M + + N + N I D A ++Y +L C+ + M
Sbjct: 374 VLDTM-VKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMF 432
Query: 546 ---EKLDYVLSLNRKEVKKPVSLNLSS 569
+ +D VL L ++ + V N+++
Sbjct: 433 ADSKSIDMVLKLKKEMDESEVEPNVNT 459
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 151/337 (44%), Gaps = 21/337 (6%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + K+ + + D++ +G VP+E+T++ LI ++G LD+A S+ RM+
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC---LKGKLDKAVSLLERMV 319
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
P + +L LV + A + ++ G + + IYS LI
Sbjct: 320 S-SKCIPNDVTYGTLINGLVKQRRA------TDAVRLLSSMEERGYHLNQHIYSVLIS-G 371
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+++ +E +SL +K M + G + V ++ +EG +A++ R++ S G
Sbjct: 372 LFKEGKAEEAMSLWRK-MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS--GC 428
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
A+ Y M+ + K G +++++++EM + S + Y +I+ LC +
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMM 488
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL----EKCRPNRTIYGIYLE 479
+ + + G+KP +Y ++ +G D + E L K +P+ Y I L+
Sbjct: 489 VWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLD 548
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
L +I +A ++ N M D+ + +CN L+
Sbjct: 549 GLCMQKDISRAVDLLNSML-DRGCDPDVITCNTFLNT 584
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 26/310 (8%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
+DEA + + M Q G P P ++N L L K L + + N+ G
Sbjct: 238 IDEAVLLLDEM-QSEGCSPSPVIYNVLIDGLCKKGD------LTRVTKLVDNMFLKGCVP 290
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
+ Y+ LI + +DK +SLL++ M + +++ K+ DA
Sbjct: 291 NEVTYNTLIHGLCLKGKLDKA-VSLLER-MVSSKCIPNDVTYGTLINGLVKQRRATDA-- 346
Query: 354 TWLRLLES--DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
+RLL S + G +Y + K G+ +++ ++R+M E+ ++ Y ++
Sbjct: 347 --VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--C 467
+ LC+ + + ++ + +G P +Y +L + G+ + + E ++K C
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKE-MDKTGC 463
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVK 525
N+ Y + ++ L G +++A +++ M TIG+ +T + + I+ G
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKM---LTIGIKPDTVAYSSIIKGLCGIGSMDA 520
Query: 526 AEKIY-DLMC 534
A K+Y +++C
Sbjct: 521 ALKLYHEMLC 530
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 127/320 (39%), Gaps = 27/320 (8%)
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
+ K + F+ G L S++ A GD + EK R+ + I +F+ AY
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAY 122
Query: 378 AKIGEFMKSLEIFREMQERLGSA-SVPAYHKIIELLCKA----EETELTESLMKEFVETG 432
K K++++F M + SV +++ ++ ++ E + ++ +
Sbjct: 123 GKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN 182
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAE 491
+ P S+ + L DR F E KC P+ Y ++ L I++A
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 492 EIFNHMHSDQTIGVNTRSC--NIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLD 549
+ + M S+ G + N+++ GD + K+ D M LK L
Sbjct: 243 LLLDEMQSE---GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299
Query: 550 YVLSLNRKEVKKPVSL---NLSSEQRENLI--GLLLGGLCIESDEKRKRHMIRF------ 598
+ L L K + K VSL +SS+ N + G L+ GL ++R +R
Sbjct: 300 HGLCLKGK-LDKAVSLLERMVSSKCIPNDVTYGTLINGL---VKQRRATDAVRLLSSMEE 355
Query: 599 -QFNENSRMHSVLRRYLYDQ 617
++ N ++SVL L+ +
Sbjct: 356 RGYHLNQHIYSVLISGLFKE 375
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/440 (20%), Positives = 178/440 (40%), Gaps = 46/440 (10%)
Query: 129 GTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLAD 188
G++ R L+ K L D + + + + R++++M +Q W + + + T +
Sbjct: 83 GSIARCLDPFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMIT 142
Query: 189 YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY------------LSAPVQGCLDE 236
+G+E KCR++FD++ + G V + ++ +I AY L+ Q +
Sbjct: 143 LLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSP 202
Query: 237 ACSIYNRMIQ------------LG--------GYQPRPSLHNSLFRALVSKPGGLSKYYL 276
+ YN +I LG G QP +N+L A + G
Sbjct: 203 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLG------ 256
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
+AE +F + SG+ + YS L+ + + E++S L +EM+ G
Sbjct: 257 DEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRL--EKVSELLREMECGGNLPDITSYN 314
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
+L A+ G +++A + ++ + + + Y K G + ++F EM+
Sbjct: 315 VLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVS 374
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
Y+ +I++ + + +L + E ++P M +Y L G+++
Sbjct: 375 NTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDA 434
Query: 457 HLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN--TRSCNII 513
EK P+ Y +E+ A E+A +FN M+ +G N + N +
Sbjct: 435 KKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNE---VGSNPTVETYNSL 491
Query: 514 LSAYLSSGDFVKAEKIYDLM 533
+ A+ G + +AE I M
Sbjct: 492 IHAFARGGLYKEAEAILSRM 511
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 150/357 (42%), Gaps = 16/357 (4%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D + L GK + K ++ ++ G +P ++++L+ AY G + EA
Sbjct: 274 DINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAEL---GSIKEAM 330
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
++ R +Q G + ++ L L K G +Y +F + S + Y
Sbjct: 331 GVF-RQMQAAGCVANAATYSVLLN-LYGKHG---RY--DDVRDLFLEMKVSNTDPDAGTY 383
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+ LI + + KE ++L +M + E + ++ C K G EDA+K L +
Sbjct: 384 NILIQVFG-EGGYFKEVVTLFH-DMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHM 441
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
E + A+ +EA+ + + ++L +F M E + +V Y+ +I +
Sbjct: 442 NEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLY 501
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGI 476
+ E+++ E+G+K + S+ + + G ++ ++ E +EK C PN
Sbjct: 502 KEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVE-MEKANCEPNELTLEA 560
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
L +AG +++ EE F + + + C ++L+ Y + A + D M
Sbjct: 561 VLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYC-MMLALYAKNDRLNDAYNLIDAM 616
>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 129/314 (41%), Gaps = 45/314 (14%)
Query: 160 NETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFH 219
N GF + W+ +Q ++ D T + +G+ ++F + D+++ G P+ +T++
Sbjct: 346 NALGF--FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN 403
Query: 220 ILIVAYLSAPV-------------QGC-------------------LDEACSIYNRMIQL 247
LI +Y A GC LD A +Y RM Q
Sbjct: 404 RLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QA 462
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
GG P ++ + L K G +L A +F ++ G Y+ ++ LH+
Sbjct: 463 GGLSPDTFTYSVIINCL-GKAG-----HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
N + L ++MQ AGFE K V+ V G +E+AE + ++ N IP
Sbjct: 517 ARNY--QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE-MQQKNWIPD 573
Query: 368 -PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
P + ++ + K G K+ + ++ M +VP + ++ + + L++
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Query: 427 EFVETGMKPLMPSY 440
+ G++P + +Y
Sbjct: 634 NMLALGLRPSLQTY 647
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 118/253 (46%), Gaps = 12/253 (4%)
Query: 286 LLTSGLEIQKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
++ G + Y+ LI HSY + N E +++ +MQ+AG + + +++ + AK
Sbjct: 390 MVRDGCQPNTVTYNRLI--HSYGRANYLNEAMNVFN-QMQEAGCKPDRVTYCTLIDIHAK 446
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASV 402
G ++ A + R+ G+ F Y + K G + ++F EM ++ + ++
Sbjct: 447 AGFLDIAMDMYQRM--QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
Y+ +++L KA + L ++ G +P +Y + + + G + F+E
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 463 CLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHM-HSDQTIGVNTRSCNIILSAYLSS 520
+K P+ +YG+ ++ AGN+EKA + + M H+ + N +CN +LS +L
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG--LRPNVPTCNSLLSTFLRV 622
Query: 521 GDFVKAEKIYDLM 533
+A ++ M
Sbjct: 623 NKIAEAYELLQNM 635
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 155/368 (42%), Gaps = 53/368 (14%)
Query: 169 WMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA 228
W++ + + D L D G++ + K + +++ VP+E T+ +L+ AY ++
Sbjct: 87 WILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTS 146
Query: 229 PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
G L++A +++ M + G + P ++N+ L+ GG + Q+A IF +
Sbjct: 147 ---GLLEKAEAVFAEMRKYG-FPPSAVVYNAYIDGLMK--GGDT----QKAVEIFERMKR 196
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISL-LKKEMQQAGFEEGKEVLLSVLRVCAKEGD 347
+ Y+ LI L+ K ++L + EM+ + +++ A+EG
Sbjct: 197 DRCQPSTATYTMLINLYG---KASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGL 253
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
E AE+ + +L E+ G+ + Y MEAY++ G + EIF MQ +Y
Sbjct: 254 CEKAEEIFEQLQEA--GLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASY 311
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE 465
+ +++ +A E +++ + G+ P M S++ L + Y
Sbjct: 312 NIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAY------------------ 353
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
AG + K EEI N MH I +T N +L+ Y G F K
Sbjct: 354 ----------------SRAGKVAKCEEIVNQMHKSG-IKPDTFVLNSMLNLYGRLGQFEK 396
Query: 526 AEKIYDLM 533
E++ M
Sbjct: 397 MEEVLTAM 404
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 138/323 (42%), Gaps = 18/323 (5%)
Query: 162 TGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHIL 221
FR++E M++ + D A+ L + K + I + + + PS F +
Sbjct: 505 NAFRIFEEMLKS-GLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPI 563
Query: 222 IVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF 281
I + V G + A I + +++ G P +N+L L+ K +++A
Sbjct: 564 IEGF---AVAGDMKRALDILD-LMRRSGCAPTVMTYNALIHGLIRK------NQVERAVS 613
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+ + + +G+ + Y+ I + Y D + ++++ G + + ++LR
Sbjct: 614 VLNKMSIAGITPNEHTYT--IIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRA 671
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGS 399
C K G ++ A + S I FVY + + +A+ G+ ++ ++ ++M+E
Sbjct: 672 CCKSGRMQSALAVTREM--SSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVP 729
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
++ Y I CKA + + ++++ E + G+KP + +Y L + + DR
Sbjct: 730 PNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKC 789
Query: 460 FSEC-LEKCRPNRTIYGIYLESL 481
F E L +P+ Y + SL
Sbjct: 790 FEEMKLAGLKPDEAAYHCLVTSL 812
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 56/347 (16%)
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRAL--VSKP-----GGLSKYYLQQ-----AEFI 282
DEAC + R+++ RP ++ A + KP G + YY ++ A
Sbjct: 245 DEACREFRRVVE-----SRPEDWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARAT 299
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG--------------- 327
F N+ G+E +++ L+ H+Y D +EM+ G
Sbjct: 300 FENMRARGIEPNAFVFTSLV--HAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGF 357
Query: 328 ------------FEEGKE--------VLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
F+E K + +++ + G+++ AE+ + E P
Sbjct: 358 GKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPI 417
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
A+ M Y I + K L +F ++E + S+ +Y +I L K + ++ KE
Sbjct: 418 DAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKE 477
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGN 486
+G+K +Y L + +++L F E L+ +P+R IY + +E+ GN
Sbjct: 478 MESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGN 537
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+++A I M ++ N R+ I+ + +GD +A I DLM
Sbjct: 538 MDRAIRILEKMQKERMQPSN-RAFRPIIEGFAVAGDMKRALDILDLM 583
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 139/378 (36%), Gaps = 57/378 (15%)
Query: 189 YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA-PVQGCLDEACSIYNRMIQL 247
Y K R F+++ +G P+ F L+ AY A ++G L + I+L
Sbjct: 286 YYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIEL 345
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
+ L+S G ++ Q A+ +F T+ ++ IYS +I H
Sbjct: 346 TIVT---------YSILISGFGKIND--TQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQ 394
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
N+D R L EM++ G + + S++ ++D +K + T
Sbjct: 395 SGNMD--RAEELVHEMEEDGIDAPIDAYHSMMHGYTI---IQDEKKCLIVFERLKECCFT 449
Query: 368 PAFVYK---MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
P+ + + Y KIG+ K++ I +EM+ + Y +I + +
Sbjct: 450 PSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRI 509
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRL---------------HLAFSECLEK--- 466
+E +++G++P Y L + +G DR + AF +E
Sbjct: 510 FEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAV 569
Query: 467 ------------------CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTR 508
C P Y + L +E+A + N M S I N
Sbjct: 570 AGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKM-SIAGITPNEH 628
Query: 509 SCNIILSAYLSSGDFVKA 526
+ II+ Y ++GD KA
Sbjct: 629 TYTIIMRGYAATGDIAKA 646
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 77/182 (42%), Gaps = 5/182 (2%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EA 376
+ KEM+ +G + + ++ D +A + + +L+S G+ +Y + EA
Sbjct: 474 ISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKS--GLQPDRAIYNLLIEA 531
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
+ K+G +++ I +MQ+ S A+ IIE A + + ++ +G P
Sbjct: 532 FCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPT 591
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSE-CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
+ +Y L + + +R ++ + PN Y I + G+I KA E F
Sbjct: 592 VMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFT 651
Query: 496 HM 497
+
Sbjct: 652 KI 653
>gi|302806226|ref|XP_002984863.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
gi|300147449|gb|EFJ14113.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
Length = 564
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Query: 286 LLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKE 345
++ G E Y+ LI H Y D + L MQ G E + +++ + AK
Sbjct: 93 MIREGCEPNVVTYNRLI--HCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKA 150
Query: 346 GDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVP 403
G DA R ++ G F Y + K G+ + ++F EM +R + S+
Sbjct: 151 G-FHDAAMDLYRQMQH-AGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLV 208
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC 463
Y+ II+L KA + ++ L + E G P +Y + + N G + F E
Sbjct: 209 TYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEE- 267
Query: 464 LEKCR--PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
+E+ + I+G+ ++ GN EKA + FN M D + N +CN +LSAYL S
Sbjct: 268 MERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRM-LDSGLQPNVPACNSLLSAYLRSS 326
Query: 522 DFVKAEKIYDLM 533
+ A + M
Sbjct: 327 FYDAAGGVLGGM 338
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 122/297 (41%), Gaps = 12/297 (4%)
Query: 158 RENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMT 217
+E + + W +Q ++ D T + +G+ + F ++ D++I +G P+ +T
Sbjct: 45 KEAGVAYNFFIWARKQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVT 104
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
++ LI Y A LD + ++N M Q+ G +P + +L L +K G +
Sbjct: 105 YNRLIHCYGRA---NDLDSSLKLFNVM-QMVGCEPDRVTYCTLID-LQAKAG-----FHD 154
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
A ++ + +G + D ++ I +H L EM G+
Sbjct: 155 AAMDLYRQMQHAGF--RPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNI 212
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
++ + AK G + A K + L E + ME G + ++F EM+
Sbjct: 213 IIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAG 272
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
A P + ++++ K E +++G++P +P+ +L + YL +D
Sbjct: 273 WVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYD 329
>gi|302757495|ref|XP_002962171.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
gi|300170830|gb|EFJ37431.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
Length = 731
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 159/379 (41%), Gaps = 44/379 (11%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ + G+ KFA+ +F +++ G + +TF+ +I Y A G EA + +M
Sbjct: 235 MISFYGEHAKFAEASKVFAEMMKAGVELTTVTFNAMIHVYGKA---GRTREAELLVTKMK 291
Query: 246 QLGGYQPRPSLHNSL-------------------------------FRALVSKPGGLSKY 274
Q P + +NSL FR L+S +
Sbjct: 292 QRKDCCPDVATYNSLIEMYVKNDKLELVSGCLERMRDSGVSPDQVTFRTLISAYA--ANN 349
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
+ +AE + + SG I + +Y+ +I ++ ++ K S+ + + G E V
Sbjct: 350 VVWKAEALVQEMEGSGFFIDQAMYTVMIAMYVRARDVSKAE-SVFRFLHSRGGLEVSTYV 408
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREM 393
V+ V A+ ++ A + + L + G+ TP+ + M+AY F ++ +F M
Sbjct: 409 --GVMDVYAEHKCLDQAREVFE--LAKNAGLKTPSLYNVMMKAYGACDRFTDAVTVFEAM 464
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
++ S + +++ +I+LLCK E+ + ++ G KP + S ++ + Y ++G
Sbjct: 465 EKDGASPNEASFNSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDMGRV 524
Query: 454 DRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI 512
F E L + Y L + AG +A++ + + + + +T
Sbjct: 525 REAERVFKEMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFVP-DTIVYTS 583
Query: 513 ILSAYLSSGDFVKAEKIYD 531
++ Y + G +AEKIY+
Sbjct: 584 MMKLYSNLGLTAEAEKIYE 602
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 134/303 (44%), Gaps = 37/303 (12%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
+F +F+ + G P+E +F+ LI +G L E +++ G++P
Sbjct: 453 RFTDAVTVFEAMEKDGASPNEASFNSLI----QLLCKGRLLEILQRVLVLVKAAGFKPSL 508
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
+ +S+ VS G + + +++AE +F +L SG+E YS L L++Y +
Sbjct: 509 ASCSSV----VSFYGDMGR--VREAERVFKEMLASGVEADVICYSAL--LNAYAEAGFAR 560
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK- 373
++ AGF V S++++ + G +AEK + E + + F
Sbjct: 561 EAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLGLTAEAEKIY----EEISRLSPDVFAANT 616
Query: 374 -MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE----LTESLMKEF 428
+ Y K G F ++ ++FR MQ + A +++L +A + E + + + F
Sbjct: 617 MLNLYIKSGMFTEAEQLFRAMQRGKPGLNEVACTMMLKLYREAGKIEQGLDVARVMSRRF 676
Query: 429 VETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCR-----PNRTIYGIYLESLK 482
+ T + ++ + MY+ G M + L E L++ R P+R+ + + E L+
Sbjct: 677 LITDAR----AFNGVIAMYVKAGLMREAL-----EALKEMRRAGLVPSRSTFSCFEEILE 727
Query: 483 NAG 485
AG
Sbjct: 728 RAG 730
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 130/302 (43%), Gaps = 36/302 (11%)
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
Y+ L+N L R L G +K+ L Q + +L + YS L+ +H +
Sbjct: 113 YEANVFLYNILLRTL----GRAAKWELLQK--YWSEMLGERVPPTIFTYSILVDVHG-RA 165
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES---DNGIP 366
+ E I + M ++G E + ++ + + + + GD+E+AEK + L D
Sbjct: 166 GMKDEAIRFYR-HMIESGVEPDEVMVSTYMNLQRRFGDLEEAEKAFWGLFSENLVDGTTK 224
Query: 367 TP----AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
P F + Y + +F ++ ++F EM + + ++ +I + KA T E
Sbjct: 225 RPENPETFNTMISFYGEHAKFAEASKVFAEMMKAGVELTTVTFNAMIHVYGKAGRTREAE 284
Query: 423 SLMKEFVETGMK------PLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-----PNR 471
L+ T MK P + +Y +L MY+ +D+L L S CLE+ R P++
Sbjct: 285 LLV-----TKMKQRKDCCPDVATYNSLIEMYVK---NDKLELV-SGCLERMRDSGVSPDQ 335
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
+ + + + KAE + M ++ ++++ Y+ + D KAE ++
Sbjct: 336 VTFRTLISAYAANNVVWKAEALVQEMEGSGFF-IDQAMYTVMIAMYVRARDVSKAESVFR 394
Query: 532 LM 533
+
Sbjct: 395 FL 396
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 154/366 (42%), Gaps = 24/366 (6%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
+Q R+ ++ + G+ + K D F ++ G P+ T+ +I + + A
Sbjct: 5 IQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKA-- 62
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTS 289
G + A ++MI+ G +P L+N + GL K + +A +F ++ +
Sbjct: 63 -GNVVLAMDFLDKMIKTG-LEPDTLLYNVVL-------DGLGKANMIDEACKLFASMKSM 113
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
G D Y+ I + S E +LL EM++ G +V+ + K G +E
Sbjct: 114 GCP--ADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIE 171
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
A ++L+ + + A ++ G + EIF M++ + + +++ ++
Sbjct: 172 SAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAML 231
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR- 468
+ KA + L M E G+KP ++ L N LG A+ + L++ R
Sbjct: 232 DCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINC---LGRAKYASEAY-KVLQEMRS 287
Query: 469 ----PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFV 524
P+ Y +E+ AGN+ KA E+F M N + N+++ A + +G +
Sbjct: 288 AGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEK-AGCSANVVTYNLLIDALVKAGRYQ 346
Query: 525 KAEKIY 530
A IY
Sbjct: 347 DARDIY 352
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 110/263 (41%), Gaps = 33/263 (12%)
Query: 194 RKFAKC-RD-----IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL 247
R +C RD +FD++ +G PS + +I Y A G ++ A + +M+
Sbjct: 127 RSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKA---GRIESAMVVLKKMLD- 182
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
P NSL A VS+ G + A IF + SG+ + ++ ++
Sbjct: 183 KNLAPDDYTLNSLITA-VSRTG-----RTELACEIFERMKKSGVAVNTVSFNAML----- 231
Query: 308 QDNIDKE-RISL---LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
D K ++ L EM+ G + +++ + +A K + +
Sbjct: 232 -DCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSA-- 288
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
G+ F Y +EA+AK G K+ E+F +M++ SA+V Y+ +I+ L KA +
Sbjct: 289 GLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDA 348
Query: 422 ESLMKEFVETGMKPLMPSYINLT 444
+ + + K ++P I T
Sbjct: 349 RDI---YFDMKKKGILPDAITAT 368
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 157/389 (40%), Gaps = 53/389 (13%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ + + K +K + D+ +G P +T++ LI AY QG L+EA + + M
Sbjct: 260 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR---QGLLEEAFELMDSM- 315
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
G +P +N++ L K G KY +A+ + +L G+ Y+ L+
Sbjct: 316 SGKGLKPCVFTYNAIINGLC-KTG---KYL--RAKGVLDEMLKIGMSPDTATYNILLVEC 369
Query: 306 SYQDNI-DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
DN+ D ERI EM G +++ + +K G ++ A K + + + G
Sbjct: 370 CRNDNMMDAERIF---DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM--KNAG 424
Query: 365 IPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+ +Y + + + G ++L++ EM E+ V Y+ I+ LCK + +
Sbjct: 425 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 484
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESL 481
L E E G+ P ++ L N Y G ++ F +++ +P+ Y ++
Sbjct: 485 ELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 544
Query: 482 KNAGNIEKAEEIFNHM--------HSDQTIGVN--------------------------T 507
+EK E++N M H I +N
Sbjct: 545 CKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATI 604
Query: 508 RSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
+CN I+ Y +G+ VKA++ M LK
Sbjct: 605 ITCNTIVKGYCRAGNAVKADEFLSNMLLK 633
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 103/236 (43%), Gaps = 23/236 (9%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
++E M+Q++ + D L D K + K ++++D+I++ P+ +++ ILI Y
Sbjct: 521 LFEMMIQRNL-KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 579
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ-----QAE 280
+ GC+ EA +++ M++ G F A + + K Y + +A+
Sbjct: 580 CN---MGCVSEAFRLWDEMVEKG------------FEATIITCNTIVKGYCRAGNAVKAD 624
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
N+L G+ Y+ LI ++N+D R L +M+ +G +L
Sbjct: 625 EFLSNMLLKGIVPDGITYNTLINGFIKEENMD--RAFALVNKMENSGLLPDVITYNVILN 682
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
+++G +++AE L+++E + + + ++ + EM +R
Sbjct: 683 GFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 738
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
K+G + EI++E+ +V + +I LCK ++ E T+S + + E G+ P +
Sbjct: 230 VKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDV 289
Query: 438 PSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+Y L N Y G + + L S + +P Y + L G +A+ + +
Sbjct: 290 VTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 349
Query: 497 MHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M IG+ +T + NI+L + + + AE+I+D M
Sbjct: 350 MLK---IGMSPDTATYNILLVECCRNDNMMDAERIFDEM 385
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 133/312 (42%), Gaps = 13/312 (4%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
+ ++F + R +F + QG P+ ++ ILI +DEA + N MI GG+Q
Sbjct: 64 QAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK---VDEAAELLNEMID-GGHQ 119
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P + SL L + K L++A +F ++ G +Y+ LI +
Sbjct: 120 PNVVTYGSLLSGLCK----MGK--LKEAVDLFSRMVYRGCPPDGVVYNVLI--DGFSKKG 171
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
D L +EM + G S+L +++G+ + + +L F
Sbjct: 172 DMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFN 231
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
++ + K+G+ +++ +F EM+ V +Y+ ++ +C + + L++E + +
Sbjct: 232 NLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRS 291
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKA 490
G+ P + SY L + Y G D F E + P+ Y ++ L AG + A
Sbjct: 292 GVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAA 351
Query: 491 EEIFNHMHSDQT 502
+F M ++ +
Sbjct: 352 FVVFKDMIANGS 363
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 90/197 (45%), Gaps = 2/197 (1%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
+L V AK G + T+ +L + T + Y + + + F ++ +FR M +
Sbjct: 23 LLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRL 456
S +V +Y +I LC+ ++ + L+ E ++ G +P + +Y +L + +G + + +
Sbjct: 83 CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142
Query: 457 HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
L C P+ +Y + ++ G++ +A +F M I + N +LS
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI-PTVFTYNSLLSG 201
Query: 517 YLSSGDFVKAEKIYDLM 533
+ G+F + + ++ M
Sbjct: 202 FSRKGEFGRVQSLFKDM 218
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 110/258 (42%), Gaps = 18/258 (6%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K K + D+F ++ +G P + +++LI + +G + EA ++ M++ G
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK---KGDMGEAYRLFEEMLEKGCI- 189
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI-WLHSYQDN 310
P +NSL S+ G + + +F ++L G ++ L+ D
Sbjct: 190 PTVFTYNSLLSGF-SRKGEFGR-----VQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDM 243
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
++ R+ L EM+ G +++R +G +A++ ++ S G ++
Sbjct: 244 VEAHRLFL---EMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
++ Y+K G ++++F E+ + +Y II+ LC+A + + K+ +
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360
Query: 431 TGMKP----LMPSYINLT 444
G P ++P I L
Sbjct: 361 NGSAPDAAVVIPLVIGLC 378
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 150/347 (43%), Gaps = 20/347 (5%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
F + M+ Q D + L + K K + +F +++++G VP T+ LI
Sbjct: 601 AFAKFRCMLDQGVLP-DVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLI 659
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
+G L A +++ M + G P +N+L L K G ++K A +
Sbjct: 660 SNLCK---EGDLKAAFELHDDMCK-KGINPNIVTYNALINGLC-KLGEIAK-----AREL 709
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
F + GL YS +I + N+ E L M+ G V +++ C
Sbjct: 710 FDGIPEKGLARNSVTYSTIIAGYCKSANL-TEAFQLFHG-MKLVGVPPDSFVYCALIDGC 767
Query: 343 AKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSAS 401
K G+ E A +L ++E GI TPAF ++ + K+G+ +++ ++ +M + + +
Sbjct: 768 CKAGNTEKALSLFLGMVEE--GIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPN 825
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
Y +IE C + E L E + + P + +Y +L + Y +G + F
Sbjct: 826 HVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFD 885
Query: 462 ECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
E + + +P+ + + +++ GN KA ++ + M S+ GVN
Sbjct: 886 EMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSE---GVNV 929
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 151/357 (42%), Gaps = 22/357 (6%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYL-SAPVQGCLDEA 237
D + L D ++++ + + + D++ G P + + LI ++ + + G
Sbjct: 301 DNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVK 360
Query: 238 CSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY-LQQAEFIFHNLLTSGLEIQKD 296
++ R I+L + +H GL K L++AE +F + G++
Sbjct: 361 EEMFARKIKLNTFTYYALIH------------GLCKIGDLEKAEDLFSEMTMMGIKPDIQ 408
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
Y+ LI + N++K L+ E+++ + +++ GD+ A + +
Sbjct: 409 TYNCLIEGYYKVQNMEKAYELLI--EIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQ 466
Query: 357 RLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCK 414
++ G+ +Y ++ K G F ++++I M+++ S V Y+ +I CK
Sbjct: 467 EMISW--GLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCK 524
Query: 415 AEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTI 473
A + E +S + E + G+KP + +Y + Y G +F E L+ PN I
Sbjct: 525 AGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVI 584
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
++ GN KA F M DQ + + ++ ++++ +G +A ++
Sbjct: 585 CTDLIDGYCKDGNTTKAFAKFRCML-DQGVLPDVQTHSVLIHGLSKNGKLQEAMGVF 640
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 155/380 (40%), Gaps = 30/380 (7%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFD--DIINQGRVPSEMTF 218
+ GFRV + M + + F + A + KE ++A D+ + D + + M
Sbjct: 57 DLGFRVQKEMSESGFCMDRFTVGC-FAHALCKEGRWADALDMIEREDFKLDTVLCTHMIS 115
Query: 219 HILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL-FRALVSKPGGLSKYYLQ 277
++ +Y DEA S +RM + + N + +R L+S G L K L
Sbjct: 116 GLMEASYF--------DEAMSFLHRM------RCNSCIPNVVTYRTLLS--GFLKKKQLG 159
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL-L 336
+ I + ++T G +++ L+ HSY + D L M G G V +
Sbjct: 160 WCKRIINMMMTEGCNPNPSLFNSLV--HSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNI 217
Query: 337 SVLRVCAKEG----DVED-AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFR 391
+ +C +E D+ D AEK + +L ++ + +G+F K+ ++ +
Sbjct: 218 FIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIK 277
Query: 392 EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
EM + Y K+I LC A + E L +E G+ P + +Y L + + G
Sbjct: 278 EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG 337
Query: 452 MHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC 510
+ ++ F E C P Y + + A + +A +IF+ M D N +
Sbjct: 338 LIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM-VDAGCRPNDVTY 396
Query: 511 NIILSAYLSSGDFVKAEKIY 530
++ +G+ KA ++Y
Sbjct: 397 GALVDGLCKAGNISKAFEVY 416
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 20/283 (7%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG-- 249
K ++ + DIF +++ G P+++T+ L+ A G + +A +Y ++I
Sbjct: 370 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA---GNISKAFEVYAKLIGTSDSA 426
Query: 250 ----YQPRPSLHN-----SLFRALVSKPGGLSKYY-LQQAEFIFHNLLTSGLEIQKDIYS 299
Y P H + ALV GL K + + A + +L+SG E +Y
Sbjct: 427 DSDFYFPCEDRHTLAPNVVTYGALVD---GLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 483
Query: 300 GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
LI ID + L +M + G+ S++ K+G ++ A K ++L
Sbjct: 484 ALIDGFCKAGKIDSAQEVFL--QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 541
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
+ + ++ +IGE K+L++ M+E+ S +V Y +I+ L KA + +
Sbjct: 542 KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKID 601
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
L+ L + G P +Y L N G+ D+ L E
Sbjct: 602 LSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGE 644
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 139/332 (41%), Gaps = 31/332 (9%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L D K + + +F+++ + G P+ +T+ LI AYL A + +A I++R
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ---VPQANDIFHR 383
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M+ G +P + +L L K G +SK + ++ L+ + D Y
Sbjct: 384 MVD-AGCRPNDVTYGALVDGLC-KAGNISKAFE-----VYAKLIGTSDSADSDFYFPCED 436
Query: 304 LHSYQDNI--------------DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
H+ N+ + L M +G E V +++ K G ++
Sbjct: 437 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 496
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
A++ +L++ + + ++ K G ++++ +M + + +V Y +I
Sbjct: 497 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 556
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECLEK 466
+ LC+ E+E L+ E G P + +Y L + LG ++ L+ F++ K
Sbjct: 557 DGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALID---GLGKAGKIDLSLDLFTQMSRK 613
Query: 467 -CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
C PN Y + + L AG ++KA + M
Sbjct: 614 GCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 127/350 (36%), Gaps = 33/350 (9%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA- 228
MM + +L L E+ +A + + + G P + ++I I +
Sbjct: 167 MMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQE 226
Query: 229 --PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNL 286
P LD A IY M+ + ++ N R L G+ K+ +A + +
Sbjct: 227 KLPSPDLLDLAEKIYGEMLAANCVLNKVNVAN-FARCLC----GVGKF--DKAFQLIKEM 279
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEG 346
+ G YS +I + + E+ LL +EM+ G ++ K G
Sbjct: 280 MRKGFVPDTSTYSKVITFLCHATKV--EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG 337
Query: 347 DVEDAEKTWL-RLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
+E A+ WL + S PT + + AY K + ++ +IF M + +
Sbjct: 338 LIEQAQ--WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVT 395
Query: 405 YHKIIELLCKAEETELTESLMKEFVETG----------------MKPLMPSYINLTNMYL 448
Y +++ LCKA + + + T + P + +Y L +
Sbjct: 396 YGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLC 455
Query: 449 NLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
D H L C PN +Y ++ AG I+ A+E+F M
Sbjct: 456 KAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 505
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 122/328 (37%), Gaps = 29/328 (8%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K+++ C+ I + ++ +G P+ F+ L+ +Y + A + NRM G
Sbjct: 154 KKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYA---YAYKLLNRMTTCG-CP 209
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P ++N ++ + S L AE I+ +L + + K +
Sbjct: 210 PGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN-GIPTPAF 370
DK L KEM + GF V+ VE K +L E G+ +
Sbjct: 270 DKA--FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVE---KAFLLFQEMKMVGVTPDVY 324
Query: 371 VYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
Y + +++ K G ++ +F EM+ S +V Y +I KA++ +
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-----------------EKCRPNR 471
V+ G +P +Y L + G + +++ + PN
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHS 499
YG ++ L A ++ A E+ + M S
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAMLS 472
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 154/366 (42%), Gaps = 24/366 (6%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
+Q R+ ++ + G+ + K D F ++ G P+ T+ +I + + A
Sbjct: 5 IQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKA-- 62
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTS 289
G + A + ++MI+ G +P L N + GL K + +A +F ++ +
Sbjct: 63 -GNVVLAMELLDKMIKTG-LEPDTLLCNVVL-------DGLGKANMMDEACKLFASMKSM 113
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
G D Y+ I + S E +LL EM++ G +V+ + K G +E
Sbjct: 114 G--CPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIE 171
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
A ++L+ + + A ++ G + EIF M++ + + +++ ++
Sbjct: 172 SAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAML 231
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR- 468
+ KA + L M E G+KP ++ L N LG A+ + L++ R
Sbjct: 232 DCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINC---LGRAKYASEAY-KVLQEMRS 287
Query: 469 ----PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFV 524
P+ Y +E+ AGN+ KA E+F M N + N+++ A + +G +
Sbjct: 288 AGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEK-AGCSANVVTYNLLIDALVKAGRYQ 346
Query: 525 KAEKIY 530
A IY
Sbjct: 347 DARDIY 352
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 30/254 (11%)
Query: 194 RKFAKC-RD-----IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL 247
R +C RD +FD++ +G PS + +I Y A G ++ A + +M+
Sbjct: 127 RSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKA---GRIESAMVVLKKMLD- 182
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
P NSL A VS+ G + A IF + SG+ + ++ ++
Sbjct: 183 KNLAPDDYTLNSLITA-VSRTG-----RTELACEIFERMKKSGVAVNTVSFNAML----- 231
Query: 308 QDNIDKE-RISL---LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
D K ++ L EM+ G + +++ + +A K + +
Sbjct: 232 -DCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSA-- 288
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
G+ F Y +EA+AK G K+ E+F +M++ SA+V Y+ +I+ L KA +
Sbjct: 289 GLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDA 348
Query: 422 ESLMKEFVETGMKP 435
+ + + G+ P
Sbjct: 349 RDIYFDMKKKGILP 362
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 151/375 (40%), Gaps = 24/375 (6%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + + K K +IF ++ +G P ++ +LI + G + +A SI++
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL---GNMQKASSIFDE 652
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
M++ G P ++N L GG + +++A+ + + GL Y +I
Sbjct: 653 MVE-EGLTPNVIIYNMLL-------GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
Y + D L EM+ G V +++ C + DVE A T +
Sbjct: 705 --DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA-ITIFGTNKKG 761
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE----RLGSASVPAYHKIIELLCKAEET 418
T F + K G+ E+ + + R G + Y+ +I+ LCK
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIY 477
E + L + + P + +Y +L N Y +G + F E + P+ +Y +
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881
Query: 478 LESLKNAGNIEKA----EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ + G KA +++F D ++ +C +LS + G+ AEK+ + M
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
Query: 534 CLKKYEIESAWMEKL 548
+Y +SA + +L
Sbjct: 942 VRLQYIPDSATVIEL 956
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 135/341 (39%), Gaps = 34/341 (9%)
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
R + + T L + +F + ++ QG P ++ LI+ A +DE
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR---MDE 505
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALV--SKPGGLSKYYLQQAEFIFHNLLTSGLEIQ 294
A S M++ G +P + + + S+ KY + E G+
Sbjct: 506 ARSFLVEMVE-NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE--------CGVLPN 556
Query: 295 KDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKE--VLLSVLRVCAKEGDVEDAE 352
K + +GLI + + + E S + + Q + K VL++ L K V+DAE
Sbjct: 557 KVLCTGLINEYCKKGKV-IEACSAYRSMVDQGILGDAKTYTVLMNGL---FKNDKVDDAE 612
Query: 353 KTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
+ + + GI F Y + ++K+G K+ IF EM E + +V Y+ ++
Sbjct: 613 EIFREM--RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRP 469
C++ E E + L+ E G+ P +Y + + Y G F E L+ P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC 510
+ +Y ++ ++E+A IF G N + C
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIF---------GTNKKGC 762
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 126/326 (38%), Gaps = 49/326 (15%)
Query: 204 DDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRA 263
+ +I +G VP + T+ +LI L++A S+ M LG SL N +
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKR---LEDAKSLLVEMDSLG-----VSLDNHTYSL 317
Query: 264 LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEM 323
L+ G L A+ + H +++ G+ I+ +Y I + S
Sbjct: 318 LID--GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMS----------------- 358
Query: 324 QQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEF 383
KEG +E A+ + ++ S A+ +E Y +
Sbjct: 359 --------------------KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 384 MKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINL 443
+ E+ EM++R S Y +++ +C + + + +++KE + +G +P + Y L
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 444 TNMYL-NLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQT 502
+L N D + + + P+ Y + L A +++A M +
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-VENG 517
Query: 503 IGVNTRSCNIILSAYLSSGDFVKAEK 528
+ N + +S Y+ + +F A+K
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADK 543
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 143/334 (42%), Gaps = 20/334 (5%)
Query: 160 NETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFH 219
E FR++ +++ Y+ + T + KE K A+ + ++ QG P+ T+
Sbjct: 306 TERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYT 365
Query: 220 ILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQA 279
LI + +G + A + N+M + G+QP +N+L L K +Q+A
Sbjct: 366 TLISGHCK---EGSFNCAFELMNKM-RREGFQPNIYTYNALIDGLCKKGK------IQEA 415
Query: 280 EFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVL 339
+ GL++ K Y+ +I H Q +I + L + + + +
Sbjct: 416 YKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYA-LDLFNRMAENGCHPDIHTYTTLIA 474
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
R C ++ +E+++K + + L + +PT + + Y K+G+ +L +F M +
Sbjct: 475 RYC-QQRQMEESQKLFDKCLAIEL-VPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGC 532
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
A Y +I LCK E +L + ++ K L+P + + ++ +
Sbjct: 533 QADSITYGALISGLCKESRLEEARALYEGMLD---KRLVPCEVTPVTLAFEYCRREKAVV 589
Query: 459 AFS--ECLEKCRPNRTIYGIYLESLKNAGNIEKA 490
A S + L+K R N T+ + + L G++E A
Sbjct: 590 AVSILDRLDKRRKNHTV-NVLVRKLSAIGHVEDA 622
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 83/194 (42%), Gaps = 3/194 (1%)
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSAS 401
C ++G +E+ + + + + + + G F E+FR M E +
Sbjct: 195 CCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPN 254
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
V Y I+ LCK + +++E V G+KP + ++ +L N +G +R F
Sbjct: 255 VVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFL 314
Query: 462 ECLEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
+ ++ +PN Y + + G + +AE + M +Q + NT + ++S +
Sbjct: 315 KLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRM-VEQGLAPNTNTYTTLISGHCK 373
Query: 520 SGDFVKAEKIYDLM 533
G F A ++ + M
Sbjct: 374 EGSFNCAFELMNKM 387
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 102/267 (38%), Gaps = 14/267 (5%)
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
E + L MQ GF ++RV ++G D + + R+LE G P Y
Sbjct: 202 EEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEM--GTPPNVVNYT 259
Query: 374 --MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE- 430
++ K ++ + EM + +V + +I LCK TE L + ++
Sbjct: 260 AWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKS 319
Query: 431 TGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEK 489
+ KP + +Y + Y G R + +E+ PN Y + G+
Sbjct: 320 SSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNC 379
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLD 549
A E+ N M + N + N ++ G +A K+ L+ + ++K+
Sbjct: 380 AFELMNKMRR-EGFQPNIYTYNALIDGLCKKGKIQEAYKV-----LRMANNQGLQLDKVT 433
Query: 550 YVLSLNR--KEVKKPVSLNLSSEQREN 574
Y + + K+ +L+L + EN
Sbjct: 434 YTVMITEHCKQGHITYALDLFNRMAEN 460
>gi|297826989|ref|XP_002881377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327216|gb|EFH57636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 589
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 160/358 (44%), Gaps = 45/358 (12%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
V EW++++ ++ D L D G++ +F + ++ ++ VP+E T+ +LI AY
Sbjct: 154 VCEWILRRSSFQPDVICFNLLIDAYGQKFRFKEAESLYVQLLESRCVPTEDTYTLLIKAY 213
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRPSL--HNSLFRALVSKPGGLSKYYLQQAEFIF 283
A G +++A ++ +I++ + PS+ +N+ L+ + G +QA +F
Sbjct: 214 CMA---GLIEKAEAV---LIEMQNHHVSPSVTVYNAYIEGLMKRKGNT-----EQAIDVF 262
Query: 284 HNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL-LKKEMQQAGFEEGKEVLLSVLRVC 342
+ + + Y+ +I L+ K +S L EM+ + +++
Sbjct: 263 QRMKRDRCKPTTETYNLMINLYG---KASKSYMSWKLFCEMRSHQCKPNICTYTALVNAF 319
Query: 343 AKEGDVEDAEKTWLRL-----LESDNGIPTPA------------------FVYKMEAYAK 379
A+EG E AE+ + +L ++S G P A + ++AY +
Sbjct: 320 AREGLCEKAEEIFEQLQEDGHIDSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 379
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKII-ELLCKAEETELTESLMKEFVETGMKPLMP 438
G + +F EM+ RLG A H ++ +A + E+++KE E G++P
Sbjct: 380 AGLHSDAEAVFEEMK-RLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMSENGVEPDTF 438
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
++ N+Y LG ++ +E +E C + + Y I + AG +E+ EE+F
Sbjct: 439 VLNSMLNLYGRLGQFTKMEKILAE-MENGPCTADISTYNILINIYGKAGFLERIEELF 495
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 122/340 (35%), Gaps = 72/340 (21%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ H + + T L + +E K +IF+ + G + S + Y +A +
Sbjct: 300 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHIDSRAGY-----PYGAAEI 354
Query: 231 ------QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
GC + S YN M+ G R LH+ AE +F
Sbjct: 355 FSLMQHMGCEPDRAS-YNIMVDAYG---RAGLHS-------------------DAEAVFE 391
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
+ G I + S ++ L +Y D + + KEM + G E VL S+L +
Sbjct: 392 EMKRLG--IAPTMKSHMLLLSAYSRARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL--- 446
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
Y ++G+F K +I EM+ +A +
Sbjct: 447 --------------------------------YGRLGQFTKMEKILAEMENGPCTADIST 474
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
Y+ +I + KA E E L E E KP + ++ + Y ++ + F E +
Sbjct: 475 YNILINIYGKAGFLERIEELFVELKERNFKPDVVTWTSRIGAYSRKKLYVKCLEIFEEMI 534
Query: 465 EK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
+ C P+ + L + + +E+ + MH ++
Sbjct: 535 DSGCAPDGGTAKVLLSACSSEDQVEQVTSVLRTMHKGVSV 574
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 151/375 (40%), Gaps = 24/375 (6%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + + K K +IF ++ +G P ++ +LI + G + +A SI++
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL---GNMQKASSIFDE 652
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
M++ G P ++N L GG + +++A+ + + GL Y +I
Sbjct: 653 MVE-EGLTPNVIIYNMLL-------GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
Y + D L EM+ G V +++ C + DVE A T +
Sbjct: 705 --DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA-ITIFGTNKKG 761
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE----RLGSASVPAYHKIIELLCKAEET 418
T F + K G+ E+ + + R G + Y+ +I+ LCK
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIY 477
E + L + + P + +Y +L N Y +G + F E + P+ +Y +
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881
Query: 478 LESLKNAGNIEKA----EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ + G KA +++F D ++ +C +LS + G+ AEK+ + M
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
Query: 534 CLKKYEIESAWMEKL 548
+Y +SA + +L
Sbjct: 942 VRLQYIPDSATVIEL 956
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 136/341 (39%), Gaps = 34/341 (9%)
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
R + + T L + +F + ++ QG P ++ LI+ A +DE
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR---MDE 505
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALV--SKPGGLSKYYLQQAEFIFHNLLTSGLEIQ 294
A S M++ G +P + + + S+ KY + E G+
Sbjct: 506 ARSFLVEMVE-NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE--------CGVLPN 556
Query: 295 KDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKE--VLLSVLRVCAKEGDVEDAE 352
K + +GLI + ++ + E S + + Q + K VL++ L K V+DAE
Sbjct: 557 KVLCTGLINEYCKKEKV-IEACSAYRSMVDQGILGDAKTYTVLMNGL---FKNDKVDDAE 612
Query: 353 KTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
+ + + GI F Y + ++K+G K+ IF EM E + +V Y+ ++
Sbjct: 613 EIFREM--RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRP 469
C++ E E + L+ E G+ P +Y + + Y G F E L+ P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC 510
+ +Y ++ ++E+A IF G N + C
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIF---------GTNKKGC 762
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 126/326 (38%), Gaps = 49/326 (15%)
Query: 204 DDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRA 263
+ +I +G VP + T+ +LI L++A S+ M LG SL N +
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKR---LEDAKSLLVEMDSLG-----VSLDNHTYSL 317
Query: 264 LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEM 323
L+ G L A+ + H +++ G+ I+ +Y I + S
Sbjct: 318 LID--GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMS----------------- 358
Query: 324 QQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEF 383
KEG +E A+ + ++ S A+ +E Y +
Sbjct: 359 --------------------KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 384 MKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINL 443
+ E+ EM++R S Y +++ +C + + + +++KE + +G +P + Y L
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 444 TNMYL-NLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQT 502
+L N D + + + P+ Y + L A +++A M +
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-VENG 517
Query: 503 IGVNTRSCNIILSAYLSSGDFVKAEK 528
+ N + +S Y+ + +F A+K
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADK 543
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 151/375 (40%), Gaps = 24/375 (6%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + + K K +IF ++ +G P ++ +LI + G + +A SI++
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL---GNMQKASSIFDE 652
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
M++ G P ++N L GG + +++A+ + + GL Y +I
Sbjct: 653 MVE-EGLTPNVIIYNMLL-------GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
Y + D L EM+ G V +++ C + DVE A T +
Sbjct: 705 --DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA-ITIFGTNKKG 761
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE----RLGSASVPAYHKIIELLCKAEET 418
T F + K G+ E+ + + R G + Y+ +I+ LCK
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIY 477
E + L + + P + +Y +L N Y +G + F E + P+ +Y +
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881
Query: 478 LESLKNAGNIEKA----EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ + G KA +++F D ++ +C +LS + G+ AEK+ + M
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
Query: 534 CLKKYEIESAWMEKL 548
+Y +SA + +L
Sbjct: 942 VRLQYIPDSATVIEL 956
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 135/341 (39%), Gaps = 34/341 (9%)
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
R + + T L + +F + ++ QG P ++ LI+ A +DE
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR---MDE 505
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALV--SKPGGLSKYYLQQAEFIFHNLLTSGLEIQ 294
A S M++ G +P + + + S+ KY + E G+
Sbjct: 506 ARSFLVEMVE-NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE--------CGVLPN 556
Query: 295 KDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKE--VLLSVLRVCAKEGDVEDAE 352
K + +GLI + + + E S + + Q + K VL++ L K V+DAE
Sbjct: 557 KVLCTGLINEYCKKGKV-IEACSAYRSMVDQGILGDAKTYTVLMNGL---FKNDKVDDAE 612
Query: 353 KTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
+ + + GI F Y + ++K+G K+ IF EM E + +V Y+ ++
Sbjct: 613 EIFREM--RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRP 469
C++ E E + L+ E G+ P +Y + + Y G F E L+ P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC 510
+ +Y ++ ++E+A IF G N + C
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIF---------GTNKKGC 762
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 126/326 (38%), Gaps = 49/326 (15%)
Query: 204 DDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRA 263
+ +I +G VP + T+ +LI L++A S+ M LG SL N +
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKR---LEDAKSLLVEMDSLG-----VSLDNHTYSL 317
Query: 264 LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEM 323
L+ G L A+ + H +++ G+ I+ +Y I + S
Sbjct: 318 LID--GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMS----------------- 358
Query: 324 QQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEF 383
KEG +E A+ + ++ S A+ +E Y +
Sbjct: 359 --------------------KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 384 MKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINL 443
+ E+ EM++R S Y +++ +C + + + +++KE + +G +P + Y L
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 444 TNMYL-NLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQT 502
+L N D + + + P+ Y + L A +++A M +
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-VENG 517
Query: 503 IGVNTRSCNIILSAYLSSGDFVKAEK 528
+ N + +S Y+ + +F A+K
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADK 543
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 16/253 (6%)
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
E K + + D+ + G VP +T++ILI Y G +A ++++ MI G QP
Sbjct: 389 EGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRC---GNAKKAFNLHDEMIS-KGIQP 444
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+ SL L SK + ++ A+ +F ++ G +++ LI H N+D
Sbjct: 445 TLVTYTSLIYVL-SK-----RNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLD 498
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
R L KEM + + ++++ +EG VE+A + + GI Y
Sbjct: 499 --RAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEM--KRRGIRPDHISY 554
Query: 373 K--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
+ Y+K G+ + I EM + ++ Y+ +I+ LCK ++ +L E L+KE V
Sbjct: 555 NTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVS 614
Query: 431 TGMKPLMPSYINL 443
G+ P +Y +L
Sbjct: 615 KGITPDDSTYFSL 627
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 12/222 (5%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQE 395
++ V KEG ++ A K ++ +E + G+ Y + Y G + + M+
Sbjct: 242 MINVLCKEGKLKKA-KDFIGSME-NLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKN 299
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
R Y +I +CK + E ++++ E G+ P +Y L + Y N G
Sbjct: 300 RGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKG---D 356
Query: 456 LHLAFSECLEKCR----PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
L AF E R P + Y + + +L G +++A+ + M D I ++ + N
Sbjct: 357 LVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDM-GDSGIVPDSITYN 415
Query: 512 IILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLS 553
I+++ Y G+ KA ++D M K + L YVLS
Sbjct: 416 ILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLS 457
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 140/353 (39%), Gaps = 15/353 (4%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
T + +C R R G R+ +M+ D L M K K + I + +
Sbjct: 276 TVIHGYCSRGRVE--GARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMK 333
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
G +P+ +T++ LI Y + +G L +A + M++ P S +N L AL
Sbjct: 334 EIGLLPTAVTYNTLIDGYCN---KGDLVKAFGYRDEMVRRA-ILPTVSTYNLLIHAL--- 386
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
+ + +A+ + ++ SG+ Y+ I ++ Y + ++ L EM G
Sbjct: 387 ---FLEGKMDEADGMIKDMGDSGIVPDSITYN--ILINGYCRCGNAKKAFNLHDEMISKG 441
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSL 387
+ S++ V +K ++ A+ + +++ F ++ + G ++
Sbjct: 442 IQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAF 501
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
+ +EM +R Y+ +++ C+ + E L+KE G++P SY L + Y
Sbjct: 502 ALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGY 561
Query: 448 LNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
G ++D + P Y ++ L + AEE+ M S
Sbjct: 562 SKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVS 614
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 143/323 (44%), Gaps = 18/323 (5%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
K+ + + +FD++++QG P +TF +LI +G + EA + MIQ G P
Sbjct: 287 KWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCK---EGKVTEAKKLLEVMIQ-RGIVPNL 342
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
+NSL L A +F ++ + GLE + Y+ LI + Y +
Sbjct: 343 ITYNSLIDGFCMVGD------LNSARELFLSMPSKGLEPDEISYTTLI--NGYCKTWKVK 394
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK- 373
L EM Q G ++L+ ++G V DA+K + + G+ + +Y
Sbjct: 395 EAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVM--KTYGVSANSQIYGI 452
Query: 374 -MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++ K +++E+F E++ ++ Y +I+ LCKA + E L ++ + G
Sbjct: 453 FLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEG 512
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAE 491
++P + +Y + + + +G D ++ F + E C P+ Y L +E+
Sbjct: 513 LQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVI 572
Query: 492 EIFNHMHSDQTIGVNTRSCNIIL 514
++ + M + + N SC I++
Sbjct: 573 KLLHKM-VQKDVSPNAASCTIVV 594
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 143/332 (43%), Gaps = 22/332 (6%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLD----EACSIYNRMIQL 247
K+ ++ + + +F+++++ G P T++ L+V + C + EA I++ M+
Sbjct: 267 KKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLV-------ESCRNNNFLEAKDIFSDMLH- 318
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
G P +SL + S+ G +L QA F ++ TSGL IY+ I ++ Y
Sbjct: 319 RGVSPDLISFSSLI-GVSSRNG-----HLDQALMYFRDMKTSGLVPDNVIYT--ILINGY 370
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
N ++ +M + G ++L K+ + DA + ++E
Sbjct: 371 CRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDF 430
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
F + + K G K+L +F M ++ + Y+ +I+ CK E E L E
Sbjct: 431 CTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNE 490
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGN 486
+ + P SY L N Y NLG + E + K +P ++ +G+
Sbjct: 491 MISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGD 550
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
+ KA+E M S + +G ++ + N +++ ++
Sbjct: 551 LSKADEFLGKMIS-EGVGPDSITYNTLINGFV 581
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
FR+++ M+++ T + Y + +K + +I++G P +T++ LI
Sbjct: 519 AFRLWDEMIRKGIKPTLVTCNTVIKGYC-RSGDLSKADEFLGKMISEGVGPDSITYNTLI 577
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
++ +D+A + N+M + G QP +N + G + +Q+AE I
Sbjct: 578 NGFVKGEY---MDKAFFLINKM-ETKGLQPDVVTYNVILN------GFCRQGRMQEAELI 627
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
++ G++ + Y+ LI + QDN+ KE EM Q GF
Sbjct: 628 LRKMIERGIDPDRSTYTTLINGYVSQDNL-KEAFR-FHDEMLQRGF 671
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 151/355 (42%), Gaps = 22/355 (6%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
+ + D KE + K +FD++I QG P +T+ LI A +++A +I
Sbjct: 207 STIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQA---MNKAEAILQH 263
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M G P +N + R G S L++A + + SGL Q D+ + ++
Sbjct: 264 MFD-KGVMPNTRTYNIMIR------GYCSLGQLEEAVRLLKKMSGSGL--QPDVVTYILL 314
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ Y + M + G + + +L A +G + D + L L+ D
Sbjct: 315 IQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDV-RDLLDLMIRD- 372
Query: 364 GIPTP--AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
GIP AF + AYAK G K++ F EM++ V +Y +I +LCK E
Sbjct: 373 GIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDA 432
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL-HLAFSECLEKCRPNRTIYGIYLES 480
+ V G+ P + S+ +L + ++G ++ LAF P+ +++
Sbjct: 433 VYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDN 492
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIYDLM 533
L G + +A++ F+ + IGV N S N ++ Y G ++ K +D M
Sbjct: 493 LCKEGRVVEAQDFFDMVIH---IGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRM 544
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 55/287 (19%), Positives = 96/287 (33%), Gaps = 41/287 (14%)
Query: 240 IYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYS 299
++ RM +LG Y P +N+L + L + K + E + H G ++ S
Sbjct: 152 VFRRMPELG-YTPDVFSYNALIKGLC-----VEKKSQEALELLLHMTADGGYNCSPNVVS 205
Query: 300 GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
+ + + ++ L EM GF S++ K + AE +
Sbjct: 206 YSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMF 265
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
+ T + + Y +G+ +++ + ++M V Y +I+ CK
Sbjct: 266 DKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCA 325
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLE 479
S+ V G K PN TIY I L
Sbjct: 326 EARSVFDSMVRKGQK----------------------------------PNSTIYHILLH 351
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
G + ++ + M D I R+ NI++ AY G KA
Sbjct: 352 GYATKGALIDVRDLLDLMIRD-GIPFEHRAFNILICAYAKHGAVDKA 397
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 148/373 (39%), Gaps = 54/373 (14%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ + R D T+L +GK +F + + F ++ +G P + + +I A
Sbjct: 287 MRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKA-- 344
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSL--HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
G LD+A ++ M G Q PS+ +N++ +AL SK + + F +
Sbjct: 345 -GRLDDAVKLFEEM---GTLQCIPSVVTYNTIIKALFE-----SKSRISEISSWFERMKG 395
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
SG+ YS I + + E+ +L +EM + GF
Sbjct: 396 SGISPSPFTYS--ILIDGFCKTNRTEKAMMLLEEMDEKGFP------------------- 434
Query: 349 EDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
P P A+ ++A K + + E+F+E++E GS+S Y
Sbjct: 435 -----------------PCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAV 477
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK- 466
+I+ L KA + +L E + G P + +Y L + GM D E
Sbjct: 478 MIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHG 537
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
C P+ Y I L L G +A E+ ++M I + S N +L A +G F +A
Sbjct: 538 CIPDINSYNIILNGLAKTGGPHRAMEMLSNM-KQSAIKPDAVSYNTVLGAMSHAGLFEEA 596
Query: 527 EKIYDLMCLKKYE 539
K+ M + +E
Sbjct: 597 AKLMKEMNVLGFE 609
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 3/186 (1%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
S++ + EG E + + + + P T + + A+ K+G ++ + EM++
Sbjct: 195 SMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKD 254
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
+ Y +I L K L +E +P + +Y L G D
Sbjct: 255 NGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDE 314
Query: 456 LHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
+ F E E CRP+ + + L AG ++ A ++F M + Q I + + N I+
Sbjct: 315 AYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIP-SVVTYNTII 373
Query: 515 SAYLSS 520
A S
Sbjct: 374 KALFES 379
>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
Length = 795
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 176/427 (41%), Gaps = 31/427 (7%)
Query: 109 EQWRRAKLAWLCKELPSHKGGTLVRILNAQKK-WLRQEDGTYLAVH--CMRIRENETGFR 165
E+ + LCK + + V++L ++ L+ D TY +V +++ + R
Sbjct: 223 ERVYAITITGLCKLRDADRA---VQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALR 279
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
+ + M+ + D LAT L + K D+FD+ + G P+ +T+ +LI
Sbjct: 280 LKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKG- 338
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHN 285
+G DE + +MI+ G P N + + L L + A +F
Sbjct: 339 --CDAEGMTDETYKLCRQMIE-QGLLPSTYEFNLVIKGL------LRNKQWEDAIALFDL 389
Query: 286 LLTSGLEIQKDI--YSGLI-WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
++ +G+ D+ Y LI WL + E ++L K M++AG + S+L
Sbjct: 390 VVDTGVP---DVFTYGCLIHWLSKHHKV--HEAVNLWDK-MKEAGVKPSIVTCHSLLLGY 443
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSA 400
++G +++A K + + G P Y M+ Y K F K+ + EM + S
Sbjct: 444 CEKGCMDEALKLYSEM--PGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSC 501
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
Y+ +I LC + + ++K FV G P +Y ++ N ++ GM +
Sbjct: 502 GEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMY 561
Query: 461 SECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
+ EK PN Y +++ + A ++ +M + I + + N ++ +
Sbjct: 562 RQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNG-IHPDIAAYNAFINMFCK 620
Query: 520 SGDFVKA 526
G+ A
Sbjct: 621 QGNMSHA 627
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 151/368 (41%), Gaps = 27/368 (7%)
Query: 178 FDFALATKLAD---------YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA 228
FD + T + D ++ K K + +++D + G PS +T H L++ Y
Sbjct: 387 FDLVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCE- 445
Query: 229 PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
+GC+DEA +Y+ M G+ P + +L + G + K +A + + +
Sbjct: 446 --KGCMDEALKLYSEMPG-KGFPPNEVTYTTLMK------GYIKKKAFDKAYALLNEMHQ 496
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
+G+ + Y+ LI D + E +LK+ + + GF S++ K G +
Sbjct: 497 NGVSCGEYTYNILINGLCMVDRV-CEVDEMLKRFVSE-GFVPTTMTYNSIINGFVKAGMM 554
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
A + ++ E GI Y ++ Y + ++++ M+ + AY+
Sbjct: 555 GSALAMYRQMCE--KGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYN 612
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLE 465
I + CK + ++ G+ P + Y + Y NL M + +S +
Sbjct: 613 AFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQ 672
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
+ + IY ++ GN+ A E+++ M ++ I + ++ + SGD
Sbjct: 673 RIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIP-DDKTFTALTHGLCRSGDIDG 731
Query: 526 AEKIYDLM 533
A+++ D M
Sbjct: 732 AKRLLDDM 739
>gi|302808451|ref|XP_002985920.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
gi|300146427|gb|EFJ13097.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
Length = 574
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 110/256 (42%), Gaps = 10/256 (3%)
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+ ++ G E Y+ LI H Y D + L MQ G E + +++ +
Sbjct: 89 LLDEMIREGCEPNVVTYNRLI--HCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDL 146
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGS 399
AK G DA R ++ G F Y + K G+ + ++F EM +R +
Sbjct: 147 QAKAG-FHDAAMELYRQMQ-HAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYA 204
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
S+ Y+ II+L KA + ++ L + E G P +Y + + N G +
Sbjct: 205 PSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQV 264
Query: 460 FSECLEKCR--PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
F E +E+ + I+G+ ++ GN EKA + FN M D + N +CN +LSAY
Sbjct: 265 FEE-MERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRM-LDSGLQPNVPACNSLLSAY 322
Query: 518 LSSGDFVKAEKIYDLM 533
L S + A + M
Sbjct: 323 LRSSFYDAAGGVLGGM 338
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 122/297 (41%), Gaps = 12/297 (4%)
Query: 158 RENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMT 217
+E + + W +Q ++ D T + +G+ + F ++ D++I +G P+ +T
Sbjct: 45 KEAGVAYNFFIWARKQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVT 104
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
++ LI Y A LD + ++N M Q+ G +P + +L L +K G +
Sbjct: 105 YNRLIHCYGRAND---LDSSLKLFNVM-QMVGCEPDRVTYCTLID-LQAKAG-----FHD 154
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
A ++ + +G + D ++ I +H L EM G+
Sbjct: 155 AAMELYRQMQHAGF--RPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNI 212
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
++ + AK G + A K + L E + ME G + ++F EM+
Sbjct: 213 IIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAG 272
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
A P + ++++ K E +++G++P +P+ +L + YL +D
Sbjct: 273 WVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYD 329
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 23/319 (7%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
+EA S +RM + Y P + +L G L K L + I + ++T G
Sbjct: 287 FNEAMSFLHRM-RCNSYIPNVVTYRTLL------TGFLKKKQLGWCKRIINMMMTEGCNP 339
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL-LSVLRVCAKE----GDV 348
+++ L+ H+Y + D L M G G V + + +C +E ++
Sbjct: 340 SPSLFNSLV--HTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPEL 397
Query: 349 ED-AEKTWLRLLESD---NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
D AEK + +L + N I T F +G+F K+ +I +EM +
Sbjct: 398 LDLAEKVYEEMLVASCVLNKINTANFA---RCLCGVGKFEKAFQIVKEMMRKGFVPDAST 454
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
Y K+I LC+A+ + L +E + G+ P + +Y L + + G+ ++ F E
Sbjct: 455 YTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMR 514
Query: 465 EK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
C PN Y L + + + +A +IF+ M D N + + ++ +G+
Sbjct: 515 SAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYP-NAITYSALIDGLCKAGEI 573
Query: 524 VKAEKIYDLMCLKKYEIES 542
KA ++Y + IES
Sbjct: 574 QKACEVYAKLIGTSDNIES 592
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 143/358 (39%), Gaps = 34/358 (9%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E F++ + MM++ + D + TK+ ++ + ++ K +F ++ G P T+ I
Sbjct: 434 EKAFQIVKEMMRKGFVP-DASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTI 492
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
LI ++ A G +++A S ++ M + G P + +L A L L QA
Sbjct: 493 LIDSFCKA---GLIEQAQSWFDEM-RSAGCSPNVVTYTALLHAY------LKSKQLYQAN 542
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE-----RISLLKKEMQQAGFEEGKE-- 333
IFH ++ YS LI I K ++ ++ + EGK+
Sbjct: 543 DIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTD 602
Query: 334 ----------VLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEF 383
L++ L K D D L N I A V + + K+GE
Sbjct: 603 TISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALV---DGFCKVGEI 659
Query: 384 MKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINL 443
+ E+F M + SV Y +I+ + K +L ++ + ++ P + +Y +
Sbjct: 660 DSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAM 719
Query: 444 TNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+ G ++ L +EK C PN Y ++ L AG ++ E+F M +
Sbjct: 720 VDGLCKTGETEK-ALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKT 776
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 132/365 (36%), Gaps = 72/365 (19%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K+++ C+ I + ++ +G PS F+ L+ Y +A A ++NRM G
Sbjct: 318 KKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYA---YAYKLFNRM-NTCGCP 373
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQK---------------- 295
P ++N ++ + + L AE ++ +L + + K
Sbjct: 374 PGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKF 433
Query: 296 -------------------DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
Y+ +I +DK LL +EM++ G
Sbjct: 434 EKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKA--FLLFQEMKKVGVNPDVYTYT 491
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
++ K G +E A+ +W + S P + + AY K + ++ +IF M
Sbjct: 492 ILIDSFCKAGLIEQAQ-SWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRM-- 548
Query: 396 RLGSASVP---AYHKIIELLCKAEETELTESLMKEFVETG----------------MKPL 436
+G A P Y +I+ LCKA E + + + + T + P
Sbjct: 549 -VGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPN 607
Query: 437 MPSYINLTNMYLNL----GMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
+ +Y L N HD L + C PN+ +Y ++ G I+ A+E
Sbjct: 608 VVTYGALVNGLCKAQKVSDAHDLLDAMLAA---GCEPNQIVYDALVDGFCKVGEIDSAQE 664
Query: 493 IFNHM 497
+F M
Sbjct: 665 VFLRM 669
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 149/390 (38%), Gaps = 59/390 (15%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA-- 228
M++ + D L D + K R FD+++ G P T++ILI + A
Sbjct: 187 MKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN 246
Query: 229 ------------PVQGC-------------------LDEACSIYNRMIQLGGYQPRPSLH 257
+ GC ++EA ++ + I G P + +
Sbjct: 247 TDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEK-ITANGCTPTIATY 305
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
N+L L K G L++A + ++ +G Y+ LI D + KE+ S
Sbjct: 306 NALLNGLC-KMG-----RLEEAIDLLRKIVDNGCTPDVVTYTSLI------DGLGKEKRS 353
Query: 318 L----LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
L KEM G +++R + G + A + + + S +P +
Sbjct: 354 FEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVY-KTMTSHGCVPDVVTLST 412
Query: 374 M-EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
M + +K G ++ IF+ M+ R + + Y +I LCKA + + ++ + +
Sbjct: 413 MIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 472
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAE 491
P +Y L + G + F E LE C+P+ Y I + AGN + A
Sbjct: 473 CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 532
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
+F+ M S + S N++ L SG
Sbjct: 533 GVFDDMSSSRC------SANVVTYGALISG 556
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 127/323 (39%), Gaps = 17/323 (5%)
Query: 178 FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEA 237
D T + D++ K +K + + + I G P+ T++ L+ G L+EA
Sbjct: 265 IDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCK---MGRLEEA 321
Query: 238 CSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI 297
+ +++ G P + SL L + Y L F + GL +
Sbjct: 322 IDLLRKIVD-NGCTPDVVTYTSLIDGLGKEKRSFEAYKL------FKEMALRGLALDTVC 374
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
Y+ LI I + S + K M G L +++ +K G + A + + +
Sbjct: 375 YTALIRELLQTGKIPQA--SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIF-K 431
Query: 358 LLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
+E+ G+ VY + K + +LE+ +M++ + Y+ +I+ LCK+
Sbjct: 432 SMEA-RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKS 490
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE-CLEKCRPNRTIY 474
+ E + E +E G KP + +Y L + + G D F + +C N Y
Sbjct: 491 GDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTY 550
Query: 475 GIYLESLKNAGNIEKAEEIFNHM 497
G + L + KA F HM
Sbjct: 551 GALISGLCKRRQLTKASLYFQHM 573
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 119/303 (39%), Gaps = 18/303 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ + I G P+ T++ L+ G L+EA + +++ G P + SL
Sbjct: 8 LMEKITANGCTPTIATYNALLNGLCK---MGRLEEAIDLLRKIVD-NGCTPDVVTYTSLI 63
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L + Y L F + GL + Y+ LI I + S + K
Sbjct: 64 DGLGKEKRSFEAYKL------FKEMALRGLALDTVCYTALIRELLQTGKIPQA--SSVYK 115
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAK 379
M G L +++ +K G + A + + + +E+ G+ VY + K
Sbjct: 116 TMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIF-KSMEA-RGLAPNEVVYSALIHGLCK 173
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
+ +LE+ +M++ + Y+ +I+ LCK+ + E + E +E G KP + +
Sbjct: 174 ARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT 233
Query: 440 YINLTNMYLNLGMHDRL--HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
Y L + + G D LA + C + Y ++ L IE+A + +
Sbjct: 234 YNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKI 293
Query: 498 HSD 500
++
Sbjct: 294 TAN 296
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 151/364 (41%), Gaps = 17/364 (4%)
Query: 165 RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
RV++ M ++H D L + K K + RD+FD + +G+ P ++ I++
Sbjct: 314 RVFKEM-RRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNG 372
Query: 225 YLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
Y + +GCL + +++ M+ G P + L +A + L +A IF+
Sbjct: 373 YAT---KGCLVDMTDLFDLMLG-DGIAPDIYTFSVLIKAYANCG------MLDKAMIIFN 422
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
+ G++ Y+ +I +D +M G K +++
Sbjct: 423 EMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKF--NQMIDQGVAPDKYAYHCLIQGFCT 480
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS-ASVP 403
G + A++ L ++ + + F + K+G M + IF ++ +G
Sbjct: 481 HGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIF-DLTVNVGQHPDAV 539
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC 463
Y +++ C + E + V G++P + Y L N Y +G D F E
Sbjct: 540 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREM 599
Query: 464 LEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
L+K +P+ +Y I ++ L AG A+ F+ M ++ I +N + NI+L + +
Sbjct: 600 LQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEM-TESGIAINKCTYNIVLRGFFKNRC 658
Query: 523 FVKA 526
F +A
Sbjct: 659 FDEA 662
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 11/257 (4%)
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE--GKEVLLSVLR 340
F LL +GL + I + L+ D+ LL + + + +LL L
Sbjct: 138 FGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 197
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKSLEIFREMQERL 397
K G +D LR++ + +P A+ ++ + K G+ K+ ++F+EM +R
Sbjct: 198 DQGKSGQADD----LLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRG 253
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
+ Y ++ LCKA E+ +++ V G+ P +Y NL Y + G
Sbjct: 254 IPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAV 313
Query: 458 LAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F E P+ + + SL G I++A ++F+ M + + + S I+L+
Sbjct: 314 RVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTM-AMKGQNPDVFSYKIMLNG 372
Query: 517 YLSSGDFVKAEKIYDLM 533
Y + G V ++DLM
Sbjct: 373 YATKGCLVDMTDLFDLM 389
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 123/302 (40%), Gaps = 50/302 (16%)
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G +++AC ++ M+Q G P ++S+ AL + +AE ++ G
Sbjct: 236 EGDVNKACDLFKEMVQR-GIPPDLVTYSSVVHALCKARA------MGKAEAFLRQMVNKG 288
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ Y+ LI+ +S KE + + KEM++ L ++ K G +++
Sbjct: 289 VLPDNWTYNNLIYGYSSTGQW-KEAVRVF-KEMRRHSILPDVVTLNMLMGSLCKYGKIKE 346
Query: 351 AEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
A + + + G F YK + YA G
Sbjct: 347 ARDVFDTM--AMKGQNPDVFSYKIMLNGYATKG--------------------------- 377
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KC 467
C + T+L + ++ + G+ P + ++ L Y N GM D+ + F+E +
Sbjct: 378 ----CLVDMTDLFDLMLGD----GIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGV 429
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
+P+ Y + +L G ++ A E FN M DQ + + + + ++ + + G +KA+
Sbjct: 430 KPDVVTYTTVIAALCRIGKMDDAMEKFNQM-IDQGVAPDKYAYHCLIQGFCTHGSLLKAK 488
Query: 528 KI 529
++
Sbjct: 489 EL 490
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 157/389 (40%), Gaps = 53/389 (13%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ + + K +K + D+ +G P +T++ LI AY QG L+EA + + M
Sbjct: 103 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR---QGLLEEAFELMDSM- 158
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
G +P +N++ L K G KY +A+ + +L G+ Y+ L+
Sbjct: 159 SGKGLKPCVFTYNAIINGL-CKTG---KYL--RAKGVLDEMLKIGMSPDTATYNILLVEC 212
Query: 306 SYQDNI-DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
DN+ D ERI EM G +++ + +K G ++ A K + + + G
Sbjct: 213 CRNDNMMDAERIF---DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM--KNAG 267
Query: 365 IPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+ +Y + + + G ++L++ EM E+ V Y+ I+ LCK + +
Sbjct: 268 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 327
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESL 481
L E E G+ P ++ L N Y G ++ F +++ +P+ Y ++
Sbjct: 328 ELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 387
Query: 482 KNAGNIEKAEEIFNHM--------HSDQTIGVN--------------------------T 507
+EK E++N M H I +N
Sbjct: 388 CKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATI 447
Query: 508 RSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
+CN I+ Y +G+ VKA++ M LK
Sbjct: 448 ITCNTIVKGYCRAGNAVKADEFLSNMLLK 476
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 98/227 (43%), Gaps = 12/227 (5%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
MM Q + D L D K + K ++++D+I++ P+ +++ ILI Y +
Sbjct: 367 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCN-- 424
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
GC+ EA +++ M++ G++ N++ + + +A+ N+L
Sbjct: 425 -MGCVSEAFRLWDEMVE-KGFEATIITCNTIVKGYCRAGNAV------KADEFLSNMLLK 476
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
G+ Y+ LI ++N+D R L +M+ +G +L +++G ++
Sbjct: 477 GIVPDGITYNTLINGFIKEENMD--RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQ 534
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
+AE L+++E + + + ++ + EM +R
Sbjct: 535 EAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 581
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
K+G + EI++E+ +V + +I LCK ++ E T+S + + E G+ P +
Sbjct: 73 VKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDV 132
Query: 438 PSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+Y L N Y G + + L S + +P Y + L G +A+ + +
Sbjct: 133 VTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 192
Query: 497 MHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M IG+ +T + NI+L + + + AE+I+D M
Sbjct: 193 MLK---IGMSPDTATYNILLVECCRNDNMMDAERIFDEM 228
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 153/370 (41%), Gaps = 18/370 (4%)
Query: 167 YEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYL 226
Y+W+ Q + F L A + + +K+ + D++I + P ++ F+ L++
Sbjct: 11 YKWVKSQDGFEPHFHLYVAFAHCLMRVQKWVALEILVDEMIGKN-CPPDIKFYALVIK-- 67
Query: 227 SAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNL 286
A G A +++M +L G P ++N L K G S QA F L
Sbjct: 68 EAINTGRFQTAQHWFSKM-KLLGCPPDIVIYNILILEY-GKRGNFS-----QAMKYFSQL 120
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEG 346
GL Y ++ NIDK +L KEM++AG + + ++ + K G
Sbjct: 121 KDEGLLPDSGTYCAVLSACRKVGNIDKGNETL--KEMREAGIKPDQVAYSILIDMFGKAG 178
Query: 347 DVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
EDA T+ L S + A+ + A+AK+G ++ +F+E Q ++
Sbjct: 179 RHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFY 238
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE- 465
+I++ KA + ++K E G++P Y ++ N ++ F E E
Sbjct: 239 TMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQES 298
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDF 523
CR + Y L AG AEE+ M + +G N + + ++ Y G
Sbjct: 299 NCRFGESTYITMLNVYSKAGFHSAAEELLAKM---RQLGFRRNVVAYSTLIDMYGKVGKL 355
Query: 524 VKAEKIYDLM 533
+A +++ M
Sbjct: 356 QEATRLFSTM 365
>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
Length = 561
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 151/354 (42%), Gaps = 35/354 (9%)
Query: 188 DYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL 247
D +GK+ ++ + +F + ++G P+E+T+ ILI + +G +++A +++RM +
Sbjct: 59 DRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCK---RGMMEDALCMFDRMRE- 114
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
G + +NSL G QA + + ++ GL YS LI
Sbjct: 115 KGIRMTVYPYNSLIN------GYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCR 168
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+ D L +EM + +++ K+G++++A + + +++ES
Sbjct: 169 KG--DLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNE 226
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM-- 425
F +E Y ++G K+ +++ +M +R + Y +I ++C LT M
Sbjct: 227 VTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVC------LTLGAMKA 280
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK------CRPNRTIYGIYLE 479
KEFV L + L + L MH +E L K PN Y +L+
Sbjct: 281 KEFVAD----LENNCAVLNSFSLTALMHGFCKEGSAEILCKEMLAGHFLPNSYTYNCFLD 336
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
L N G +EKA+ + H + NT + N ++ + +G A DLM
Sbjct: 337 YLANEGELEKAKVL--HAAMLEGCLANTVTFNTLIKGFCMAGQIQGA---IDLM 385
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 107/257 (41%), Gaps = 16/257 (6%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L K+ + +F ++ VP+E+TF+++I Y G + +A +Y++
Sbjct: 195 TALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRV---GNIRKAFQLYDQ 251
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M+ G P N +R+L+S L+ ++ EF+ L + + +S
Sbjct: 252 MLDRG-LTP----DNYTYRSLISVVC-LTLGAMKAKEFVAD--LENNCAVLNS-FSLTAL 302
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+H + E +L KEM F L A EG++E A+ +LE
Sbjct: 303 MHGFCKEGSAE---ILCKEMLAGHFLPNSYTYNCFLDYLANEGELEKAKVLHAAMLEGCL 359
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
T F ++ + G+ ++++ ++ E +Y II LCK +T
Sbjct: 360 A-NTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINELCKVGDTNKAFE 418
Query: 424 LMKEFVETGMKPLMPSY 440
L E + G+KP + +Y
Sbjct: 419 LWNEMLYKGLKPDIVAY 435
>gi|30697337|ref|NP_849849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215314|sp|Q3ECH5.1|PP107_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g66345, mitochondrial; Flags: Precursor
gi|332196377|gb|AEE34498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 165/389 (42%), Gaps = 22/389 (5%)
Query: 150 LAVHC-MRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIIN 208
L V C +IR E GF V++ + + L T L Y K + I++ I+
Sbjct: 169 LLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNT-LIHYSSKSKIDDLVWRIYECAID 227
Query: 209 QGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSL--HNSL-FRALV 265
+ P+E+T I+I +G L E + +R+ G + PS+ + SL FR L
Sbjct: 228 KRIYPNEITIRIMIQVLCK---EGRLKEVVDLLDRIC---GKRCLPSVIVNTSLVFRVL- 280
Query: 266 SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
+ ++++ + LL + + YS +++ + + ++ R EM Q
Sbjct: 281 ------EEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVF--DEMLQ 332
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMK 385
GF V +RVC ++GDV++AE+ + ES F + +A+ G K
Sbjct: 333 RGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEK 392
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
LE M R S A++++++ + K E ++ + ++ G P +Y +L
Sbjct: 393 GLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIR 452
Query: 446 MYLNLGMHDR-LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
++ D+ L L + K P ++ + L G +E E+ M + I
Sbjct: 453 GFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKK-RLIE 511
Query: 505 VNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
N + ++ A+ GD A+++Y+ M
Sbjct: 512 PNADIYDALIKAFQKIGDKTNADRVYNEM 540
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 155/380 (40%), Gaps = 30/380 (7%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFD--DIINQGRVPSEMTF 218
+ GFRV + M + + F + A + KE ++A D+ + D + + M
Sbjct: 57 DLGFRVQKEMSESGFCMDRFTVGC-FAHALCKEGRWADALDMIEREDFKLDTVLCTHMIS 115
Query: 219 HILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL-FRALVSKPGGLSKYYLQ 277
++ +Y DEA S +RM + + N + +R L+S G L K L
Sbjct: 116 GLMEASYF--------DEAMSFLHRM------RCNSCIPNVVTYRTLLS--GFLKKKQLG 159
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL-L 336
+ I + ++T G +++ L+ HSY + D L M G G V +
Sbjct: 160 WCKRIINMMMTEGCNPNPSLFNSLV--HSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNI 217
Query: 337 SVLRVCAKEG----DVED-AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFR 391
+ +C +E D+ D AEK + +L ++ + +G+F K+ ++ +
Sbjct: 218 FIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIK 277
Query: 392 EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
EM + Y K+I LC A + E L +E G+ P + +Y L + + G
Sbjct: 278 EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG 337
Query: 452 MHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC 510
+ ++ F E C P Y + + A + +A +IF+ M D N +
Sbjct: 338 LIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM-VDAGCRPNDVTY 396
Query: 511 NIILSAYLSSGDFVKAEKIY 530
++ +G+ KA ++Y
Sbjct: 397 GALVDGLCKAGNISKAFEVY 416
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 20/283 (7%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG-- 249
K ++ + DIF +++ G P+++T+ L+ A G + +A +Y ++I
Sbjct: 370 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA---GNISKAFEVYAKLIGTSDSA 426
Query: 250 ----YQPRPSLHN-----SLFRALVSKPGGLSKYY-LQQAEFIFHNLLTSGLEIQKDIYS 299
Y P H + ALV GL K + + A + +L+SG E +Y
Sbjct: 427 DSDFYFPCEDRHTLAPNVVTYGALVD---GLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 483
Query: 300 GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
LI ID + L +M + G+ S++ K+G ++ A K ++L
Sbjct: 484 ALIDGFCKAGKIDSAQEVFL--QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 541
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
+ + ++ +IGE K+L++ M+E+ S +V Y +I+ L KA + +
Sbjct: 542 KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKID 601
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
L+ L + G P +Y L N G+ D+ L E
Sbjct: 602 LSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGE 644
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 139/332 (41%), Gaps = 31/332 (9%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L D K + + +F+++ + G P+ +T+ LI AYL A + +A I++R
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ---VPQANDIFHR 383
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M+ G +P + +L L K G +SK + ++ L+ + D Y
Sbjct: 384 MVD-AGCRPNDVTYGALVDGL-CKAGNISKAFE-----VYAKLIGTSDSADSDFYFPCED 436
Query: 304 LHSYQDNI--------------DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
H+ N+ + L M +G E V +++ K G ++
Sbjct: 437 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 496
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
A++ +L++ + + ++ K G ++++ +M + + +V Y +I
Sbjct: 497 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 556
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECLEK 466
+ LC+ E+E L+ E G P + +Y L + LG ++ L+ F++ K
Sbjct: 557 DGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALID---GLGKAGKIDLSLDLFTQMSRK 613
Query: 467 -CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
C PN Y + + L AG ++KA + M
Sbjct: 614 GCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 127/350 (36%), Gaps = 33/350 (9%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA- 228
MM + +L L E+ +A + + + G P + ++I I +
Sbjct: 167 MMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQE 226
Query: 229 --PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNL 286
P LD A IY M+ + ++ N R L G+ K+ +A + +
Sbjct: 227 KLPSPDLLDLAEKIYGEMLAANCVLNKVNVAN-FARCLC----GVGKF--DKAFQLIKEM 279
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEG 346
+ G YS +I + + E+ LL +EM+ G ++ K G
Sbjct: 280 MRKGFVPDTSTYSKVITFLCHATKV--EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG 337
Query: 347 DVEDAEKTWL-RLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
+E A+ WL + S PT + + AY K + ++ +IF M + +
Sbjct: 338 LIEQAQ--WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVT 395
Query: 405 YHKIIELLCKAEETELTESLMKEFVETG----------------MKPLMPSYINLTNMYL 448
Y +++ LCKA + + + T + P + +Y L +
Sbjct: 396 YGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLC 455
Query: 449 NLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
D H L C PN +Y ++ AG I+ A+E+F M
Sbjct: 456 KAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 505
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 122/328 (37%), Gaps = 29/328 (8%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K+++ C+ I + ++ +G P+ F+ L+ +Y + A + NRM G
Sbjct: 154 KKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYA---YAYKLLNRMTTCGC-P 209
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P ++N ++ + S L AE I+ +L + + K +
Sbjct: 210 PGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN-GIPTPAF 370
DK L KEM + GF V+ VE K +L E G+ +
Sbjct: 270 DKAF--QLIKEMMRKGFVPDTSTYSKVITFLCHATKVE---KAFLLFQEMKMVGVTPDVY 324
Query: 371 VYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
Y + +++ K G ++ +F EM+ S +V Y +I KA++ +
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-----------------EKCRPNR 471
V+ G +P +Y L + G + +++ + PN
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHS 499
YG ++ L A ++ A E+ + M S
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAMLS 472
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 173/418 (41%), Gaps = 54/418 (12%)
Query: 162 TGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHIL 221
+ +R+++ M Q+ DF T + + + + + +F +++ + P E+T+ L
Sbjct: 276 SAYRLFDEM-QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTAL 334
Query: 222 IVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF 281
I Y +G + EA S++N+M+Q+G P + +L L K G + A
Sbjct: 335 IDGYCK---EGKMKEAFSLHNQMLQMG-LTPNIVTYTALADGL-CKCGEVD-----TANE 384
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+ H + GLE+ Y+ L+ NID+ L K+M+ AGF
Sbjct: 385 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQA--VKLMKDMEVAGFH------------ 430
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSAS 401
DA + M+AY K E +++ E+ R+M +R +
Sbjct: 431 -------PDA----------------VTYTTLMDAYCKSREMVRAHELLRQMLDRELQPT 467
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY-LNLGMHDRLHLAF 460
V ++ ++ C + E E L+K +E G+ P +Y +L Y + M +
Sbjct: 468 VVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYR 527
Query: 461 SECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSS 520
C + P+ Y I ++ A N+++A + M + + S N ++ +
Sbjct: 528 GMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDM-VGKGFNLTVSSYNALIKGFYKR 586
Query: 521 GDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQREN-LIG 577
F++A ++++ M + E A E + +N E K ++L L E E L+G
Sbjct: 587 KKFLEARELFEQM---RREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVG 641
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 15/261 (5%)
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL-------LKKEMQQAGFEEG 331
A +F +L GL I D S +++ +++D +I+L L +EMQ G +
Sbjct: 165 ARKLFDKMLNYGLLISVD--SCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPN 222
Query: 332 KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEI 389
V+ + K G V +AE+ LR + S+ GI +Y ++ + K+G + +
Sbjct: 223 PYTYNGVILLLCKTGKVAEAERV-LREMISE-GIAPDGVIYTTLIDGFCKLGNVSSAYRL 280
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
F EMQ+R S Y +I LC+ + L E V ++P +Y L + Y
Sbjct: 281 FDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCK 340
Query: 450 LG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTR 508
G M + L PN Y + L G ++ A E+ + M + + +N
Sbjct: 341 EGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM-CRKGLELNIY 399
Query: 509 SCNIILSAYLSSGDFVKAEKI 529
+ N +++ +G+ +A K+
Sbjct: 400 TYNSLVNGLCKAGNIDQAVKL 420
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 129/314 (41%), Gaps = 45/314 (14%)
Query: 160 NETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFH 219
N GF + W+ +Q ++ D T + +G+ ++F + D+++ G P+ +T++
Sbjct: 346 NALGF--FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN 403
Query: 220 ILIVAYLSAPV-------------QGC-------------------LDEACSIYNRMIQL 247
LI +Y A GC LD A +Y RM Q
Sbjct: 404 RLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QA 462
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
GG P ++ + L K G +L A +F ++ G Y+ ++ LH+
Sbjct: 463 GGLSPDTFTYSVIINCL-GKAG-----HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
N + L ++MQ AGFE K V+ V G +E+AE + ++ N IP
Sbjct: 517 ARNY--QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE-MQQKNWIPD 573
Query: 368 -PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
P + ++ + K G K+ + ++ M +VP + ++ + + L++
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Query: 427 EFVETGMKPLMPSY 440
+ G++P + +Y
Sbjct: 634 NMLALGLRPSLQTY 647
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 117/256 (45%), Gaps = 10/256 (3%)
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ ++ G + Y+ LI HSY + N E +++ +MQ+AG + + +++
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLI--HSYGRANYLNEAMNVFN-QMQEAGCKPDRVTYCTLID 442
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLG 398
+ AK G ++ A + R+ G+ F Y + K G + ++F EM ++
Sbjct: 443 IHAKAGFLDIAMDMYQRM--QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC 500
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
+ ++ Y+ +++L KA + L ++ G +P +Y + + + G +
Sbjct: 501 TPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEA 560
Query: 459 AFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
F+E +K P+ +YG+ ++ AGN+EKA + + M + N +CN +LS +
Sbjct: 561 VFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLL-PNVPTCNSLLSTF 619
Query: 518 LSSGDFVKAEKIYDLM 533
L +A ++ M
Sbjct: 620 LRVNKIAEAYELLQNM 635
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 128/300 (42%), Gaps = 8/300 (2%)
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
A +++NRM G PR +L +++ ++ L A F LL G++
Sbjct: 83 AVALFNRMST--GTGPRVALPTVYTYSILIDCCCRARR-LDLAFAFFGCLLRQGMKADVI 139
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
+ S L+ D E + +L M + G +VL+ +G + A
Sbjct: 140 VVSSLLRGLCDAKRTD-EAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILR 198
Query: 357 RLLESDNGIPTPAFVYKMEAYA--KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCK 414
++ G P VY + K G+ ++ ++F EM ++ +V Y+ +I LCK
Sbjct: 199 MAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCK 258
Query: 415 AEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTI 473
A + + ++++ V G++P +Y L + Y LG + F E + PN
Sbjct: 259 ARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVT 318
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++ L G IE+A E F+ M + + +N S + +L Y ++G V +++LM
Sbjct: 319 CSTFVAFLCKHGRIEEAREFFDSMLA-KGHKLNIISYSTLLHGYATAGCLVDMSNLFNLM 377
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 150/366 (40%), Gaps = 46/366 (12%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
IF+D+ +G P +T+ +I A+ G +D+A +N MI G +P +++ L
Sbjct: 408 IFEDMQKRGLNPDVLTYLAVIHAFCR---MGSMDDAMDKFNHMID-KGVEPNFAVYQCLI 463
Query: 262 RALVS--------------KPGGLSKYYLQ---------------QAEFIFHNLLTSGLE 292
+ + + GL L +A+ IF ++ +G +
Sbjct: 464 QGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEK 523
Query: 293 IQKDIYSGLIWLHSYQDNIDKE-RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
+I++ LI + + + R+ M G E +++ C K G ++D
Sbjct: 524 ADVNIFTSLIDGYCLIGKMSEAFRV---HDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDG 580
Query: 352 EKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
+ LL G+ F Y ++ G + E+F+EM E + ++P Y ++
Sbjct: 581 LILFRELLH--KGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILL 638
Query: 410 ELLCKAEETELTESLMKEFVETGMK-PLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR 468
LC+ TE ++ ++ +K ++ I ++ M+ + L S
Sbjct: 639 TGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLV 698
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
P Y I +E+L G++E+AE +F+ M + + N+I+ L G+ VKA
Sbjct: 699 PTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSG-LSPTSHFINVIVRTLLEKGEIVKA-G 756
Query: 529 IYDLMC 534
IY MC
Sbjct: 757 IY--MC 760
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 70/387 (18%), Positives = 143/387 (36%), Gaps = 82/387 (21%)
Query: 183 ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYN 242
+ ++ K + + R+ FD ++ +G + +++ L+ Y +A GCL + +++N
Sbjct: 319 CSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATA---GCLVDMSNLFN 375
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
M++ G P + N L +K G +++A FIF ++ GL D+ + L
Sbjct: 376 LMVR-DGIVPNQHVFNILVNGY-AKCG-----MVREAMFIFEDMQKRGL--NPDVLTYLA 426
Query: 303 WLHSY------QDNIDK-----------------------------ERISLLKKEMQQAG 327
+H++ D +DK + L E++ G
Sbjct: 427 VIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKG 486
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSL 387
S++ KEG V +A++ + ++ + F ++ Y IG+ ++
Sbjct: 487 LGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAF 546
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
+ M + Y ++ CK + L +E + G+K
Sbjct: 547 RVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVK------------- 593
Query: 448 LNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
P YGI L+ L +AG A+E+F M + I V
Sbjct: 594 ---------------------PTTFTYGIILDGLFHAGRTAAAKEMFQEM-IESGIAVTI 631
Query: 508 RSCNIILSAYLSSGDFVKAEKIYDLMC 534
+ +I+L+ + +A ++ +C
Sbjct: 632 PTYSILLTGLCRNNCTEEAITVFQKLC 658
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 123/331 (37%), Gaps = 49/331 (14%)
Query: 201 DIFDDIINQGR-VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
DI + QG P + + +V L +G + EAC +++ M Q G P +NS
Sbjct: 195 DILRMAVKQGGGCPCNVVVYSTVVHGLFK--EGKVGEACDLFHEMTQ-QGVPPNVVTYNS 251
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
+ AL + +A+ I ++ +G++ Y+ LI H Y ++ +
Sbjct: 252 VIHALCKARA------VDKAQGILRQMVGNGVQPDNVTYNTLI--HGYSTLGQWKQAVRM 303
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAK 379
KEM G + + K G +E+A + + +L + + ++ + YA
Sbjct: 304 FKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYAT 363
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
G + +F M V G+ P
Sbjct: 364 AGCLVDMSNLFNLM-----------------------------------VRDGIVPNQHV 388
Query: 440 YINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
+ L N Y GM F + ++ P+ Y + + G+++ A + FNHM
Sbjct: 389 FNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHM- 447
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
D+ + N ++ + + GD VKAE++
Sbjct: 448 IDKGVEPNFAVYQCLIQGFCTHGDLVKAEEL 478
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 151/362 (41%), Gaps = 21/362 (5%)
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
R +F L K + G+ + R+ F+ + +G P+ + LI AY V ++E
Sbjct: 310 RTEFGLMVK---FYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAY---AVGRDMEE 363
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL--SKYYLQQAEFIFHNLLTSGLEIQ 294
A S +M + G + S+ SK G + ++ +A+ I L S
Sbjct: 364 ALSCVRKMKEEGIEMSLVTY--SVIVGGFSKAGNAEAADHWFDEAKRIHKTLNAS----- 416
Query: 295 KDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKT 354
IY +I+ H N+ ER L +EM++ G + + +++ D +
Sbjct: 417 --IYGKIIYAHCQTCNM--ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIV 472
Query: 355 WLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCK 414
+ RL E + + Y K+G+ K+LE+ R M+E ++ Y +I K
Sbjct: 473 FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK 532
Query: 415 AEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTI 473
++ ++ ++ V+ GMKP + Y N+ + +G DR E + + RP
Sbjct: 533 LKDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 592
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ + +G++ ++ E+F+ M + + N +++ + KA +I D M
Sbjct: 593 FMPIINGFAKSGDMRRSLEVFDMMRRCGCV-PTVHTFNALINGLVEKRQMEKAVEILDEM 651
Query: 534 CL 535
L
Sbjct: 652 TL 653
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 122/291 (41%), Gaps = 20/291 (6%)
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYY----LQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
G+ P + L L +K G +SK + + E + HNL T + I +G + L
Sbjct: 480 GFTPTVVTYGCLIN-LYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI-----NGFVKL 533
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
+ + + ++M + G + + +++ G+++ A +T + + +
Sbjct: 534 KDWANAF------AVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHR 587
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA-SVPAYHKIIELLCKAEETELTES 423
T F+ + +AK G+ +SLE+F +M R G +V ++ +I L + + E
Sbjct: 588 PTTRTFMPIINGFAKSGDMRRSLEVF-DMMRRCGCVPTVHTFNALINGLVEKRQMEKAVE 646
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLK 482
++ E G+ +Y + Y ++G + F+ E + Y L++
Sbjct: 647 ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACC 706
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+G ++ A + M S + I N+ NI++ + GD +A + M
Sbjct: 707 KSGRMQSALAVTKEM-SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 756
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 164/387 (42%), Gaps = 46/387 (11%)
Query: 165 RVYEWM--MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
R +E+ M+ + + + + L D KE + D+ G +P+E T+ LI
Sbjct: 318 RAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLI 377
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEF 281
A A G L EA + N M+Q G L+ + AL+ GL K + +AE
Sbjct: 378 DANCKA---GNLTEAWKLLNDMLQAG-----VKLNIVTYTALLD---GLCKAGRMIEAEE 426
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+F ++L G+ + +Y+ L+ H Y I ER+ K ++Q K L+ +
Sbjct: 427 VFRSMLKDGISPNQQVYTALV--HGY---IKAERMEDAMKILKQMTECNIKPDLILYGSI 481
Query: 342 CAKEGDVEDAEKTWLRLLE-SDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLG 398
E+T L L E GI + ++AY K G+ +L F+EMQ+
Sbjct: 482 IWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGV 541
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
A++ Y +I+ LC+A EL + G++P + Y +L + L
Sbjct: 542 EATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLID-----------GL 590
Query: 459 AFSECLE---------KCR---PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN 506
+ C+E +CR P+ T + ++ GN+++A + + M ++ I +
Sbjct: 591 CXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRM-TELAIEFD 649
Query: 507 TRSCNIILSAYLSSGDFVKAEKIYDLM 533
++S + G+ +A K ++ M
Sbjct: 650 LHVYTSLVSGFSQCGELHQARKFFNEM 676
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 86/194 (44%), Gaps = 6/194 (3%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSA 400
KEGD+E++ + ++++ E G+ Y ++ Y K+G + +F EM++
Sbjct: 241 CKEGDLENSRRLFVQMREM--GLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVP 298
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLA 459
+ Y+ +I CK E+ E G+KP + +Y L + + G M + L
Sbjct: 299 DIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLL 358
Query: 460 FSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
PN Y +++ AGN+ +A ++ N M + +N + +L
Sbjct: 359 XDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQ-AGVKLNIVTYTALLDGLCK 417
Query: 520 SGDFVKAEKIYDLM 533
+G ++AE+++ M
Sbjct: 418 AGRMIEAEEVFRSM 431
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 139/327 (42%), Gaps = 22/327 (6%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
R F+D+I G PS T++++I YL +G L+ + ++ +M ++ G P +NS
Sbjct: 215 RKFFNDMIGAGIAPSVFTYNVMI-DYLCK--EGDLENSRRLFVQMREM-GLSPDVVTYNS 270
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
L K G L++ +F+ + G Y+GLI + Y R
Sbjct: 271 LIDGY-GKVGS-----LEEVASLFNEMKDVGCVPDIITYNGLI--NCYCKFEKMPRAFEY 322
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAY 377
EM+ G + +++ KEG ++ A K + + G+ F Y ++A
Sbjct: 323 FSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRT--GLLPNEFTYTSLIDAN 380
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
K G ++ ++ +M + ++ Y +++ LCKA E + + ++ G+ P
Sbjct: 381 CKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQ 440
Query: 438 PSYINLTNMYLNL-GMHDRLHL--AFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
Y L + Y+ M D + + +EC +P+ +YG + + +E+ + I
Sbjct: 441 QVYTALVHGYIKAERMEDAMKILKQMTEC--NIKPDLILYGSIIWGHCSQRKLEETKLIL 498
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSG 521
M S + I N I+ AY +G
Sbjct: 499 EEMKS-RGISANPVISTTIIDAYFKAG 524
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 12/250 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ DY+ KE R +F + G P +T++ LI Y G L+E S++N M
Sbjct: 236 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKV---GSLEEVASLFNEMK 292
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+G P +N L + +A F + +GL+ YS LI
Sbjct: 293 DVGCV-PDIITYNGLINCYCKFEK------MPRAFEYFSEMKNNGLKPNVVTYSTLIDAF 345
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
++ + + I LL +M++ G + S++ K G++ +A K +L++ +
Sbjct: 346 C-KEGMMQGAIKLLX-DMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKL 403
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
+ ++ K G +++ E+FR M + S + Y ++ KAE E ++
Sbjct: 404 NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL 463
Query: 426 KEFVETGMKP 435
K+ E +KP
Sbjct: 464 KQMTECNIKP 473
>gi|115480461|ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1 -like protein [Oryza sativa Japonica
Group]
gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|125606498|gb|EAZ45534.1| hypothetical protein OsJ_30195 [Oryza sativa Japonica Group]
gi|215768653|dbj|BAH00882.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 543
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 157/388 (40%), Gaps = 34/388 (8%)
Query: 181 ALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSI 240
AL + D + K F R + D++ + S LI Y+ A + EA +
Sbjct: 145 ALYAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPS---EASDL 201
Query: 241 YNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSG 300
+ RM + G P P+ SL G LSK L + S +Y+
Sbjct: 202 FRRMEEYGAGAPDPATLASLL-------GALSKKRLASEAQAMFDSYKSVFTPDVVLYTT 254
Query: 301 LI--WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
L+ W S + N + ER+ EMQQAG +V+ + G V A++ ++
Sbjct: 255 LVHAWCRSGRLN-EAERVF---AEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQM 310
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
++S T F M A+ K G + L++ +M++ + Y+ ++E C ++
Sbjct: 311 IDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQS 370
Query: 419 ELTES--LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYG 475
L + ++ + G P ++ + + L LG + + E +C+PN Y
Sbjct: 371 NLDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYN 430
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSD---QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDL 532
+ + N+EK+ ++ + D Q + N + ++ A+ G++ +A
Sbjct: 431 LLMRLF----NLEKSMDMVLRIKKDMDAQGVEPNVNTYAALIEAFCGRGNWKRAH----- 481
Query: 533 MCLKKYEIESAWMEK---LDYVLSLNRK 557
M L++ E A D VL+L RK
Sbjct: 482 MTLREMVEEKALKPTKPVYDMVLALLRK 509
>gi|302763321|ref|XP_002965082.1| hypothetical protein SELMODRAFT_83088 [Selaginella moellendorffii]
gi|300167315|gb|EFJ33920.1| hypothetical protein SELMODRAFT_83088 [Selaginella moellendorffii]
Length = 731
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 166/416 (39%), Gaps = 81/416 (19%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ + G+ KFA+ +F +++ G + +TF+ +I Y A G EA + M
Sbjct: 235 MISFYGEHAKFAEGSKVFAEMMKAGVELTTVTFNAMIHVYGKA---GRTREAELLVTNMK 291
Query: 246 QLGGYQPRPSLHNSL-------------------------------FRALVSKPGGLSKY 274
Q P + +NSL FR L+S +
Sbjct: 292 QRKDCCPDVATYNSLIEMYVKNDKLELVSGCLERMRDSGVSADQVTFRTLISAYA--ANN 349
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
+ +AE + + SG I + +Y+ +I ++ ++ K S+ + + G E V
Sbjct: 350 VVWKAEALVQEMEGSGFLIDQAMYTVMIAMYVRARDVPKAE-SVFRFLHSRGGLEVSTYV 408
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREM 393
V+ V A+ ++ A + + L + G+ TP+ + M+AY F ++ +F M
Sbjct: 409 --GVMDVYAEHKCLDQAREVFE--LAKNAGLKTPSLYNVMMKAYGACDRFTDAVTVFEAM 464
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
++ S + +++ +I+LLCK E+ + ++ G KP + S ++ + Y ++G
Sbjct: 465 EKDGASPNEASFNSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDMGRV 524
Query: 454 DRLHLAFSECLEK-------CR-----------------------------PNRTIYGIY 477
F E L C P+ +Y
Sbjct: 525 REAERVFKEMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVYTSM 584
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++ N G I +AE+I+ + + + + N +L+ Y+ SG F +AE+++ M
Sbjct: 585 MKLYSNLGLIAEAEKIYEEISR---LSPDVFAANTMLNLYIKSGMFTEAEQLFRAM 637
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 135/303 (44%), Gaps = 37/303 (12%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
+F +F+ + G P+E +F+ LI +G L E +++ G++P
Sbjct: 453 RFTDAVTVFEAMEKDGASPNEASFNSLI----QLLCKGRLLEILQRVLVLVKAAGFKPSL 508
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
+ +S+ VS G + + +++AE +F +L SG+E YS L L++Y +
Sbjct: 509 ASCSSV----VSFYGDMGR--VREAERVFKEMLASGVEADVICYSAL--LNAYAEAGFAR 560
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK- 373
++ AGF V S++++ + G + +AEK + E + + F
Sbjct: 561 EAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLGLIAEAEKIY----EEISRLSPDVFAANT 616
Query: 374 -MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE----LTESLMKEF 428
+ Y K G F ++ ++FR MQ + A +++L +A + E + + + F
Sbjct: 617 MLNLYIKSGMFTEAEQLFRAMQRGKPGLNEVACTMMLKLYREAGKIEQGLDVARVMSRRF 676
Query: 429 VETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCR-----PNRTIYGIYLESLK 482
+ T + ++ + MY+ G M + L E L++ R P+R+ + + E L+
Sbjct: 677 LITDAR----AFNVVIAMYVKAGLMREAL-----EALKEMRRAGLVPSRSTFSCFEEILE 727
Query: 483 NAG 485
AG
Sbjct: 728 RAG 730
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 129/302 (42%), Gaps = 36/302 (11%)
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
Y+ L+N L R L G +K+ L Q + +L + YS L+ +H +
Sbjct: 113 YEANVFLYNILLRTL----GRAAKWELLQK--YWSEMLGERVPPTIFTYSILVDVHG-RA 165
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES---DNGIP 366
+ E I + M ++G E + ++ + + + + GD+E+AEK + L D
Sbjct: 166 GMKDEAIRFYR-HMIESGVEPDEVMVSTYMNLQRRFGDLEEAEKAFWGLFSENLVDGTTK 224
Query: 367 TP----AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
P + + Y + +F + ++F EM + + ++ +I + KA T E
Sbjct: 225 RPENPETYNTMISFYGEHAKFAEGSKVFAEMMKAGVELTTVTFNAMIHVYGKAGRTREAE 284
Query: 423 SLMKEFVETGMK------PLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-----PNR 471
L+ T MK P + +Y +L MY+ +D+L L S CLE+ R ++
Sbjct: 285 LLV-----TNMKQRKDCCPDVATYNSLIEMYVK---NDKLELV-SGCLERMRDSGVSADQ 335
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
+ + + + KAE + M + ++ ++++ Y+ + D KAE ++
Sbjct: 336 VTFRTLISAYAANNVVWKAEALVQEMEGSGFL-IDQAMYTVMIAMYVRARDVPKAESVFR 394
Query: 532 LM 533
+
Sbjct: 395 FL 396
>gi|255578090|ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530592|gb|EEF32469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 636
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 126/287 (43%), Gaps = 10/287 (3%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E+ +V+E + +Q WYR + KL +GK ++ K ++F +I++G S ++
Sbjct: 136 ESALKVFELLREQIWYRPYSGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTA 195
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ AY + G LD+A S+ M + QP ++ L ++ V + +A+
Sbjct: 196 LLSAYGRS---GLLDKAFSLLEEMKRNPDCQPDVHTYSILIKSCV------QVFAFDKAK 246
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ N+ + G+ Y+ LI + ++ +L+K + Q E + S LR
Sbjct: 247 TLLSNMESLGISPNTITYNTLIDAYGKAKMFEEMEATLVKM-LSQQNCEPDVWTMNSTLR 305
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
G +E EK + + + F +++Y K G++ K + MQ+ S
Sbjct: 306 AFGISGQIETMEKCYEKFQGAGIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQKYHYSW 365
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
++ Y+ +I+ +A + + E L + +KP + +L Y
Sbjct: 366 TIITYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 412
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/284 (19%), Positives = 111/284 (39%), Gaps = 26/284 (9%)
Query: 314 ERISLLKKEMQQAGFEEGKEVL---------LSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
ERI+ L+ E FE +E + + ++ + K E A + + ++
Sbjct: 128 ERITALRWESALKVFELLREQIWYRPYSGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCD 187
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELLCKAEETELTES 423
+ ++ + AY + G K+ + EM+ V Y +I+ + + ++
Sbjct: 188 VSHESYTALLSAYGRSGLLDKAFSLLEEMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKT 247
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL--EKCRPNRTIYGIYLESL 481
L+ G+ P +Y L + Y M + + + L + C P+ L +
Sbjct: 248 LLSNMESLGISPNTITYNTLIDAYGKAKMFEEMEATLVKMLSQQNCEPDVWTMNSTLRAF 307
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM-------C 534
+G IE E+ + I + + N++L +Y +GD+ K + + M
Sbjct: 308 GISGQIETMEKCYEKFQG-AGIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQKYHYSWT 366
Query: 535 LKKYEI------ESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQR 572
+ Y I + +++++Y+ L R E KP + L S R
Sbjct: 367 IITYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 410
Score = 39.3 bits (90), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
++A +F ++ G ++ + Y+ L+ + +DK SLL++ + +
Sbjct: 172 EKAHELFQAMIHEGCDVSHESYTALLSAYGRSGLLDKA-FSLLEEMKRNPDCQPDVHTYS 230
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMK-SLEIFREM 393
+++ C + + A KT L +ES GI Y ++AY K F + + + +
Sbjct: 231 ILIKSCVQVFAFDKA-KTLLSNMES-LGISPNTITYNTLIDAYGKAKMFEEMEATLVKML 288
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
++ V + + + + E E ++F G++P + ++ L + Y G +
Sbjct: 289 SQQNCEPDVWTMNSTLRAFGISGQIETMEKCYEKFQGAGIEPSIMTFNVLLDSYGKAGDY 348
Query: 454 DRLHLAFSECLEKCRPNRTI--YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
++ A E ++K + TI Y I +++ AG++++ E +F M S++ SC
Sbjct: 349 KKMS-AVMEYMQKYHYSWTIITYNIVIDAFGRAGDLKQMEYLFRLMRSERI----KPSCV 403
Query: 512 IILSAYLSSGDFVKAEKI 529
+ S + G K EKI
Sbjct: 404 TLCSLVRAYGQAEKPEKI 421
>gi|225456631|ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 133/316 (42%), Gaps = 39/316 (12%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+I+++ + W+ +Q ++ D T + +G+ R+F + +++ G P+
Sbjct: 355 QIQDHPVALGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNV 414
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG----GL 271
+T++ LI +Y A L+EA S+++RM Q G QP + +L + +K G L
Sbjct: 415 VTYNRLIHSYGRA---NYLNEAVSVFDRM-QEAGCQPDRVTYCTLID-IHAKAGFLDVAL 469
Query: 272 SKY--------------------------YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
Y +L A +F ++ G Y+ +I L
Sbjct: 470 HMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQ 529
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+ N L ++MQ AGF+ K V+ V G +E+AE + ++ N +
Sbjct: 530 AKARNYPTAL--ELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTE-MKRKNWV 586
Query: 366 PT-PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
P P + ++ + K+G KS E ++ M +VP + ++ + +L
Sbjct: 587 PDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNL 646
Query: 425 MKEFVETGMKPLMPSY 440
++ + G++P + +Y
Sbjct: 647 LQSMLRLGLQPSLQTY 662
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 101/217 (46%), Gaps = 4/217 (1%)
Query: 304 LHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+HSY + N E +S+ + MQ+AG + + +++ + AK G ++ A + ++ E+
Sbjct: 421 IHSYGRANYLNEAVSVFDR-MQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAH 479
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
T + + K G + ++F EM ++ ++ Y+ +I L KA
Sbjct: 480 LSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTAL 539
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESL 481
L ++ G +P +Y + + + G + F+E K P+ +YG+ ++
Sbjct: 540 ELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLW 599
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
GN+EK+ E + M + + N +CN +LSA+L
Sbjct: 600 GKVGNVEKSWEWYQAM-LNAGLCPNVPTCNSLLSAFL 635
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 139/329 (42%), Gaps = 15/329 (4%)
Query: 207 INQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVS 266
++QG E V +S PV + C + G + R L N L
Sbjct: 14 LSQGSSEMESCLQKNQVKLVSTPVDSQIQSRCLLCLGNNSCGTVRSRTKLMNILVER--G 71
Query: 267 KPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQA 326
KP Q+A+FIF++L+ G Y+ L+ + Q + IS L EM++
Sbjct: 72 KP--------QEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRF--KAISGLLSEMEET 121
Query: 327 GFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKS 386
G + +L +++ ++ G+V++A + + ++ ES T F ++ Y I + +S
Sbjct: 122 GIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEES 181
Query: 387 LEIFREMQERLG-SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+++ M + Y+ ++ LCK + + +++ + + +G++P + +Y L
Sbjct: 182 MKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLAR 241
Query: 446 MYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
Y G ++ + L +K PN GI + GN+ +A + M D I
Sbjct: 242 AYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMR-DLGIH 300
Query: 505 VNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
N N ++ +L GD +K +M
Sbjct: 301 PNLVIFNSLIKGFLDIGDSDGVDKALTMM 329
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/365 (18%), Positives = 158/365 (43%), Gaps = 17/365 (4%)
Query: 173 QHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQG 232
+ +R T L + ++++F + ++ G P + + +I A+ + G
Sbjct: 85 EQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAFSES---G 141
Query: 233 CLDEACSIYNRMIQLGGYQPRPSLHNSLFRA--LVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+ EA I+ +M + G +P S N+L + ++ KP + ++ E + T+
Sbjct: 142 NVKEAMEIFQKM-EESGCKPTTSTFNTLIKGYGIIRKP----EESMKLLELMTR---TTN 193
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
L+ Y+ L+ + +I KE +++ +M +G + ++ R A++G+
Sbjct: 194 LKPNNRTYNILVGALCKKKSI-KEAWNVVH-QMLASGVQPDVVTYNTLARAYAQDGETNK 251
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
AE + +L + Y + G ++L + M++ ++ ++ +I+
Sbjct: 252 AESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIK 311
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRP 469
+++ + + E+G+KP + ++ + N + + G D+ F + L+ P
Sbjct: 312 GFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEP 371
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
+ ++ I + AG KAE + N M S + N I+S + ++G KA K+
Sbjct: 372 DIHVFSILAKGFVRAGEPVKAESLLNFM-SKYGVRPNVVIFTTIISGWCTAGKMEKAWKV 430
Query: 530 YDLMC 534
++ MC
Sbjct: 431 FEHMC 435
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 78/398 (19%), Positives = 139/398 (34%), Gaps = 81/398 (20%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY--LSA 228
M++ + D L + + + + +IF + G P+ TF+ LI Y +
Sbjct: 118 MEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRK 177
Query: 229 PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
P +E+ + M + +P +N L AL K +++A + H +L
Sbjct: 178 P-----EESMKLLELMTRTTNLKPNNRTYNILVGALCKKKS------IKEAWNVVHQMLA 226
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKER---ISLLKKE----------------------- 322
SG++ Y+ L ++ +K + +L K+
Sbjct: 227 SGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAE 286
Query: 323 -------MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME 375
M+ G + S+++ GD + +K + ES F M
Sbjct: 287 ALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMN 346
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
++ G K EIF +M L S P H + +L K FV G
Sbjct: 347 GWSSAGRMDKCQEIFDDM---LKSGIEPDIH-VFSILAKG------------FVRAGEPV 390
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
S +N + Y RPN I+ + AG +EKA ++F
Sbjct: 391 KAESLLNFMSKY------------------GVRPNVVIFTTIISGWCTAGKMEKAWKVFE 432
Query: 496 HMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
HM D + N ++ ++ Y + +AE+I +M
Sbjct: 433 HM-CDMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMM 469
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 157/399 (39%), Gaps = 54/399 (13%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+Q D L + G+ K+ +F + G P +TF L+ AY
Sbjct: 241 MEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGK--- 297
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
GC DE ++ M + G +P + +N+L + V GG + Q++ +F +LL G
Sbjct: 298 HGCYDEVRLLFTDMKERG-TEPDVNTYNTLIQ--VFGQGG----FFQESINLFWDLLDGG 350
Query: 291 LEIQKDIYSGLIW------------------LHSYQDNIDKERISLLK------------ 320
+E Y+GL++ L SY L+
Sbjct: 351 VEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEAT 410
Query: 321 ---KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--ME 375
M+++G + E +++ A G +A +L ++ D GI Y +E
Sbjct: 411 YAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMI--DEGISADVSTYNSLIE 468
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
A+ + G F ++E R+M+E S + Y ++ + C A + ++ + G P
Sbjct: 469 AFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFDEAKAQFLDLQVGGELP 528
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLK----NAGNIEKAE 491
+ SY L ++ D E LE P +IYG+ LK + N ++ E
Sbjct: 529 SVDSYCLLLSVCARRNRWDDASKVLEEMLEPNMP--SIYGVVGGILKGEMDDGTNWQRVE 586
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
F+ + D +G N R N +L A G +A +++
Sbjct: 587 YAFDGLKVD-GVGSNLRFYNALLEALWCLGQRERACRVF 624
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 86/438 (19%), Positives = 178/438 (40%), Gaps = 42/438 (9%)
Query: 129 GTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLAD 188
G++ + + + L D + + + + + R++++M + W + + + T +
Sbjct: 23 GSIAKTMEGYRNKLTINDFSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIG 82
Query: 189 YMGKERKFAKCRDIFDD---------------IINQ-GRVPS-EMTFHIL---------- 221
MG+E K ++F+D +IN GR E + H+L
Sbjct: 83 IMGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTP 142
Query: 222 -IVAY---LSAPVQGCLD-EACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYL 276
++ Y ++A +G L+ E ++ G QP +N+L A S+ GL +
Sbjct: 143 NLITYNTVINACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSR--GL----V 196
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
++A +F + +G+ Y+ L+ ++ D E + L +EM+QAG
Sbjct: 197 EEAGMVFRTMNEAGVVPDSITYNALVDIYGQADR--HEGVGELLREMEQAGNAPDVVAYN 254
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
++ + G A K + ++ E+ F +EAY K G + + +F +M+ER
Sbjct: 255 ILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKER 314
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
V Y+ +I++ + + + +L + ++ G++P M +Y L G+H
Sbjct: 315 GTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAA 374
Query: 457 HLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILS 515
L+ P + + + NA +A FN M + + + N ++
Sbjct: 375 KKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMK-ESGCKPDLETYNALIG 433
Query: 516 AYLSSGDFVKAEKIYDLM 533
A+ G + +A Y M
Sbjct: 434 AHAGGGLYCEAGSAYLTM 451
>gi|374855781|dbj|BAL58636.1| homing endonuclease [uncultured candidate division OP1 bacterium]
Length = 225
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 41/199 (20%)
Query: 565 LNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEWL-- 622
L L+ QRE L+GLLLG C+E+ + + + ++ E+S + ++LY + +W+
Sbjct: 16 LALTDLQREILVGLLLGDACLETQNRGRTYRLKI---EHSVAQAQYVQHLYHIFRDWVLQ 72
Query: 623 -----------------------HPSFKFWPK-----GRLVIPKLIHRWLTPRALAYWFM 654
H +F+F+ + G V+PKLI R LT R LAYWFM
Sbjct: 73 EPQIKRQRIAGKTYQKLWFNTVSHGAFRFYAQQFYRNGTKVVPKLIRRLLTARGLAYWFM 132
Query: 655 YGG---HRTSVGDILLKLKVSSEGIALVFKTLKAR---SLDCRVKKKGRVFWIGFLGSNS 708
G + S + +S +A + + L+ + R +++G+ +I G +
Sbjct: 133 DDGSIKSKQSKAVLFNTQGLSEPDVAKLLRVLREQFGLEAKSRRQREGQQIYIS--GRSY 190
Query: 709 TLFWKLIEPYVLDELKEDL 727
F L+EPY++ +++ L
Sbjct: 191 ERFRALVEPYLIPQMRYKL 209
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 173/418 (41%), Gaps = 54/418 (12%)
Query: 162 TGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHIL 221
+ +R+++ M Q+ DF T + + + + + +F +++ + P E+T+ L
Sbjct: 376 SAYRLFDEM-QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTAL 434
Query: 222 IVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF 281
I Y +G + EA S++N+M+Q+G P + +L L K G + A
Sbjct: 435 IDGYCK---EGKMKEAFSLHNQMLQMG-LTPNIVTYTALADGL-CKCGEVD-----TANE 484
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+ H + GLE+ Y+ L+ NID+ L K+M+ AGF
Sbjct: 485 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQA--VKLMKDMEVAGFH------------ 530
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSAS 401
DA + M+AY K E +++ E+ R+M +R +
Sbjct: 531 -------PDA----------------VTYTTLMDAYCKSREMVRAHELLRQMLDRELQPT 567
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY-LNLGMHDRLHLAF 460
V ++ ++ C + E E L+K +E G+ P +Y +L Y + M +
Sbjct: 568 VVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYR 627
Query: 461 SECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSS 520
C + P+ Y I ++ A N+++A + M + + S N ++ +
Sbjct: 628 GMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDM-VGKGFNLTVSSYNALIKGFYKR 686
Query: 521 GDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQREN-LIG 577
F++A ++++ M + E A E + +N E K ++L L E E L+G
Sbjct: 687 KKFLEARELFEQM---RREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVG 741
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 102/237 (43%), Gaps = 6/237 (2%)
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
D+ S ++ Y + +R+ L +EMQ G + V+ + K G V +AE+
Sbjct: 287 DVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERV- 345
Query: 356 LRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
LR + S+ GI +Y ++ + K+G + +F EMQ+R S Y +I LC
Sbjct: 346 LREMISE-GIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLC 404
Query: 414 KAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRT 472
+ + L E V ++P +Y L + Y G M + L PN
Sbjct: 405 QTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIV 464
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
Y + L G ++ A E+ + M + + +N + N +++ +G+ +A K+
Sbjct: 465 TYTALADGLCKCGEVDTANELLHEM-CRKGLELNIYTYNSLVNGLCKAGNIDQAVKL 520
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 166/394 (42%), Gaps = 28/394 (7%)
Query: 147 GTYLAV---HCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIF 203
G Y A+ HC E F V+ +++ + + D + L + + K + IF
Sbjct: 557 GIYTALIEGHCKEGNVTE-AFSVFRFILSRRVLQ-DVQTYSVLIHGLSRNGKMHEAFGIF 614
Query: 204 DDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRA 263
++ +G +P+ T++ LI QG +D+A + M + G P +N L
Sbjct: 615 SELQEKGLLPNAFTYNSLISGSCK---QGNVDKASQLLEEMC-IKGINPDIVTYNILIDG 670
Query: 264 LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEM 323
L K G +++A+ +F ++ GL Y+ ++ Y + + L +EM
Sbjct: 671 LC-KAG-----EIERAKNLFDDIEGRGLTPNCVTYAAMV--DGYCKSKNPTAAFQLLEEM 722
Query: 324 QQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEF 383
G + +L C KE E A + +LE T +F +E Y K G+
Sbjct: 723 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKL 781
Query: 384 MKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINL 443
++ + EM E+ + Y +I+ CKA + L E E + P +Y +L
Sbjct: 782 QEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSL 841
Query: 444 TNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKA----EEIFNH-- 496
+ Y N+G + F E + K P++ Y + +++ GN+ +A +EI
Sbjct: 842 LHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGM 901
Query: 497 -MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
M S +G+ T C++I + +G+ +A ++
Sbjct: 902 PMKSGFRLGLPT--CSVIARGFQIAGNMDEAAEV 933
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 105/259 (40%), Gaps = 38/259 (14%)
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
++A+ + ++ GL+ + Y+ LI + D E+ +K EM G E +
Sbjct: 293 REAKLMLLEMIDVGLKPEPITYNALI--DGFMRQGDIEQAFRIKDEMVACGIEANLIIWN 350
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
++L K G +E A + ++E + + +E + + ++ E+ EM++R
Sbjct: 351 TLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 410
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG----- 451
+ +V Y II LC+ + T ++++E V G+KP Y L + G
Sbjct: 411 KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEES 470
Query: 452 -----------------MHDRLHLAFS-------------ECLE-KCRPNRTIYGIYLES 480
++ L + F E LE + RPN YG +++
Sbjct: 471 RMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 530
Query: 481 LKNAGNIEKAEEIFNHMHS 499
AG +E A+ FN M S
Sbjct: 531 YSKAGEMEIADRYFNEMLS 549
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 134/314 (42%), Gaps = 17/314 (5%)
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
E++ + + + ++I+ G P +T++ LI ++ QG +++A I + M+ G +
Sbjct: 289 EKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMR---QGDIEQAFRIKDEMVACG-IEA 344
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+ N+L V K G + K A I ++ G+E YS LI H N+
Sbjct: 345 NLIIWNTLLNG-VCKAGKMEK-----ALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNM- 397
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
R L EM++ ++ + G+++ ++ NG+ A VY
Sbjct: 398 -ARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVM--NGLKPNAVVY 454
Query: 373 K--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
M A+AK G +S I M+E+ V Y+ +I CKA+ E + + E +E
Sbjct: 455 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE 514
Query: 431 TGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEK 489
++P +Y + Y G + F+E L PN IY +E GN+ +
Sbjct: 515 RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 574
Query: 490 AEEIFNHMHSDQTI 503
A +F + S + +
Sbjct: 575 AFSVFRFILSRRVL 588
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 152/363 (41%), Gaps = 29/363 (7%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L KE + + R I + + QG +P ++ LI+ + A ++EA +
Sbjct: 455 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKR---MEEARTYLME 511
Query: 244 MIQLGGYQPRPSLHN-SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
M++ + RP+ H F SK G ++ A+ F+ +L+ G+ IY+ LI
Sbjct: 512 MLE---RRLRPNAHTYGAFIDGYSKAG-----EMEIADRYFNEMLSCGVLPNVGIYTALI 563
Query: 303 WLHSYQDNIDKE----RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
H + N+ + R L ++ +Q + VL+ L ++ G + +A + L
Sbjct: 564 EGHCKEGNVTEAFSVFRFILSRRVLQDV---QTYSVLIHGL---SRNGKMHEAFGIFSEL 617
Query: 359 LESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
E G+ AF Y + K G K+ ++ EM + + + Y+ +I+ LCKA
Sbjct: 618 QEK--GLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAG 675
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYL-NLGMHDRLHLAFSECLEKCRPNRTIYG 475
E E ++L + G+ P +Y + + Y + L L P+ IY
Sbjct: 676 EIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYN 735
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCL 535
+ L EKA ++F M +T S N ++ Y SG +A + + M
Sbjct: 736 VILNFCCKEEKFEKALDLFQEMLEKGF--ASTVSFNTLIEGYCKSGKLQEANHLLEEMIE 793
Query: 536 KKY 538
K++
Sbjct: 794 KQF 796
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 156/364 (42%), Gaps = 21/364 (5%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + +++ F + + G P + F+ +I A+ + G + EA ++ +
Sbjct: 52 TTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSIINAFSES---GNMKEAMKLFRK 108
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M + G +P S N+L + + G ++ L+ EF L G++ + Y+ L+
Sbjct: 109 MKE-SGCKPTTSTFNTLIKGYGN--AGKTEEALKLLEF----LQDGGVKPNQRTYNILVR 161
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
++N+++ + K M +G + ++ R A++G+ AE+ L +L
Sbjct: 162 AWCNKENMEEAWNMVYK--MVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRRV 219
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
+ Y K G + + M+E ++ ++ +I+ +TE +
Sbjct: 220 TPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDE 279
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLK 482
++ E G++P + ++ + N + + G D+ F++ ++ + P+ + I +
Sbjct: 280 VLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYV 339
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC-------L 535
AG EKAE I M + N C ++S + S+G A K+Y+ MC L
Sbjct: 340 RAGEPEKAESILTSMRK-YGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNL 398
Query: 536 KKYE 539
K YE
Sbjct: 399 KTYE 402
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 69/364 (18%), Positives = 135/364 (37%), Gaps = 48/364 (13%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
++++ + D L + + + + +F + G P+ TF+ LI Y +A
Sbjct: 74 VEENGMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNA-- 131
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G +EA + +Q GG +P +N L RA +K +++A + + ++ SG
Sbjct: 132 -GKTEEALKLL-EFLQDGGVKPNQRTYNILVRAWCNKEN------MEEAWNMVYKMVASG 183
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
++ Y+ L +Y + + R + EM + ++ KEG++ D
Sbjct: 184 MQPDAVTYNTLA--RAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVD 241
Query: 351 AEKTWLRLLE---------------------------------SDNGIPTPAFVYK--ME 375
A + R+ E +NG+ + M
Sbjct: 242 ASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMN 301
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
A++ G K EIF +M + + A+ + + +A E E ES++ + G+ P
Sbjct: 302 AWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHP 361
Query: 436 LMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ + + + + G M + + C PN Y + A KAEE+
Sbjct: 362 NVVICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKAEELL 421
Query: 495 NHMH 498
M
Sbjct: 422 QVME 425
>gi|297838283|ref|XP_002887023.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332864|gb|EFH63282.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 539
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 165/391 (42%), Gaps = 22/391 (5%)
Query: 150 LAVHC-MRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIIN 208
L V C +IR E GF V++ + + L T L + K + I++ I+
Sbjct: 163 LLVQCYAKIRYLELGFEVFKRLCDCGFSLSVITLNT-LIHFAAKSNRVDLVWRIYEFAID 221
Query: 209 QGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSL--HNSL-FRALV 265
+ P+E T I+I +G L E + +R+ G + PS+ + SL FR L
Sbjct: 222 KRIYPNETTIRIMISVLCK---EGRLKEVVDLLDRIY---GKRCLPSVIVNTSLVFRVLE 275
Query: 266 SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
K ++++ + LL + + YS +++ + + +++ R EM +
Sbjct: 276 EK-------RVEESMSLLKRLLMKNMVVDVIGYSIVVYAKTKKGDLECARNVF--DEMIR 326
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMK 385
GF V + +RVC + GDVE+AE+ + +S F + + A+ G K
Sbjct: 327 RGFSANAFVYTAFVRVCCERGDVEEAERLMSEMEDSGVNPYEETFNFLIVGCARFGREEK 386
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
LE M R S A++ +++ L + + ++ + ++ G P +Y +L
Sbjct: 387 GLEYCEIMVARGLMPSCSAFNGMVKRLSEIDNVNRANEILTKSIDKGFVPDEHTYSHLIR 446
Query: 446 MYLNLGMHDR-LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
++ D+ L L + K P ++ + L G +E E+ M + I
Sbjct: 447 GFVEGNSIDQALKLFYEMEYRKISPGFEVFRSLIVGLCACGKVEAGEKYLRIMKR-RLIE 505
Query: 505 VNTRSCNIILSAYLSSGDFVKAEKIYDLMCL 535
N +++A+ GD A+K+Y+ M L
Sbjct: 506 PNADIYEAMINAFQKIGDKTNADKVYNEMIL 536
>gi|15235508|ref|NP_192191.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213327|sp|Q9SY07.1|PP302_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g02820, mitochondrial; Flags: Precursor
gi|4263527|gb|AAD15353.1| hypothetical protein [Arabidopsis thaliana]
gi|7269767|emb|CAB77767.1| hypothetical protein [Arabidopsis thaliana]
gi|332656833|gb|AEE82233.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 532
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 165/401 (41%), Gaps = 43/401 (10%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+I+ + + EWM+ Q + D + K R F+D+ P +
Sbjct: 105 KIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDM------PDQ 158
Query: 216 MTFHILIVAYLSAPVQGCLDE----------------ACSIYNRMIQL----GGYQPRPS 255
M H + L + VQ L + +C YN M+ + G ++ P
Sbjct: 159 MRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPV 218
Query: 256 LHNSL-FRA---LVSKPGGLSKYY----LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
L L R +V+ L+ + ++ AE ++ L YS L L++
Sbjct: 219 LIKELKIRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAK 278
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
DN++K R++L KEM++ ++ + S++ + A GD + TW ++ S +
Sbjct: 279 TDNVEKARLAL--KEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMND 336
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
++ + A K+GEF ++ ++ E + G+ + I+ +E L E +
Sbjct: 337 AEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYER 396
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRP---NRTIYGIYLESLKNA 484
VE G+ P ++ LT YL +++ F + ++ + N + + L+
Sbjct: 397 IVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAIDSVKKWTVNVRLVKGACKELEEQ 456
Query: 485 GNIEKAEEIFNHMHSDQTIG-VNTRSCNIILSAYLSSGDFV 524
GN++ AE++ + Q G VNT+ N +L Y +G+
Sbjct: 457 GNVKGAEKLMTLL---QKAGYVNTQLYNSLLRTYAKAGEMA 494
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 137/334 (41%), Gaps = 17/334 (5%)
Query: 167 YEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYL 226
+ W QQ Y T + + ++ I + +G ++ H+L
Sbjct: 169 FTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGH---RISMHLLTSLLR 225
Query: 227 SAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNL 286
+ + A I+N+M G P +++N + LV GG + A +F L
Sbjct: 226 TFGSTNNVSGALEIFNQMKSFG-CNPSTNMYNFVLELLVK--GG----FYHSAVIVFGKL 278
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEG 346
IQ D + I++HS+ + + + +EM ++G + G ++ K G
Sbjct: 279 --GQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSG 336
Query: 347 DVEDAEKTW--LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
++++A K + ++ L + T + + AK G ++ E+F EM+E S A
Sbjct: 337 NIDEACKFFNGMKNLRCSPNVVT--YTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIA 394
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
Y+ +I+ L KA E ++ L KE + G+ P + +Y + ++ G F +
Sbjct: 395 YNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLK 454
Query: 465 EK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
E+ P+ Y ++ L G ++K I M
Sbjct: 455 EQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEM 488
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 137/361 (37%), Gaps = 42/361 (11%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
+M++H T L D +GK + + + ++ QG PS +T+ L+ ++
Sbjct: 553 VMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRD 612
Query: 230 VQ-------------GC-------------------LDEACSIYNRMIQLGGYQPRPSLH 257
+ GC +D+A ++ RM + G +P +
Sbjct: 613 QEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKE-EGMEPLLGNY 671
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
+L +LV + LQ IF+ L S L +Y+ ++ + +D+
Sbjct: 672 KTLLSSLVKDEK--IDFALQ----IFNELQESSLVPDTFVYNIMVNGLVKSNRVDEA--C 723
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
L M+ S+L K G +E+A + ++ E + A+ M+
Sbjct: 724 KLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVL 783
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
K G+ +L IFR M ++ V Y +I+ L K E + + G P +
Sbjct: 784 GKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNV 843
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
Y +L + + GM DR F E + C PN Y L L AG + AE++
Sbjct: 844 GVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEE 903
Query: 497 M 497
M
Sbjct: 904 M 904
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 153/368 (41%), Gaps = 14/368 (3%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K+ K IF+++ VP ++I++ + + +DEAC + + M +
Sbjct: 680 KDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNR---VDEACKLVDSM-KNQNIL 735
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P + SL L K G L++A +F + G E Y+ L+ + +
Sbjct: 736 PDLFTYTSLLDGL-GKSG-----RLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKL 789
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
I + + M + S++ KEG VE+A + + +
Sbjct: 790 SHALI--IFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYS 847
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
++++ K G ++LE+F EMQ R ++ Y+ ++ L KA + E L++E +
Sbjct: 848 SLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKV 907
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKA 490
G P + +Y L + +GM D F EK P+ + +ESL + +A
Sbjct: 908 GCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEA 967
Query: 491 EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDY 550
E+F+ M ++ + + N+++ +G +A I+ M +K + + +
Sbjct: 968 CELFDSME-EEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKR 1026
Query: 551 VLSLNRKE 558
+LS+ ++
Sbjct: 1027 ILSVREQQ 1034
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 133/304 (43%), Gaps = 16/304 (5%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E F ++ M ++ + D T L D +GK K + IF + + VP +T+
Sbjct: 755 EEAFNMFTKMTEE-GHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSS 813
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
LI S +G ++EA + I G P +++SL + K G+ L+ E
Sbjct: 814 LID---SLGKEGRVEEAYYFFENSIS-KGCTPNVGVYSSLIDSFGKK--GMVDRALELFE 867
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ + ++ SGL + + N+ ++ L +EM++ G ++
Sbjct: 868 EMQRRQCPPNIVTYNNLLSGLA--KAGRLNVAEK----LLEEMEKVGCVPDLVTYNILID 921
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
K G V++AE + R+ E F +E+ K+ + +++ E+F M+E +
Sbjct: 922 GVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNP 981
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
SV Y+ +I++L +A ++ E+ M F E +K MP I + M L + ++ A
Sbjct: 982 SVVTYNVLIDILGRA--GKVHEAAMI-FHEMKVKGCMPDGITIGIMKRILSVREQQFHAL 1038
Query: 461 SECL 464
E L
Sbjct: 1039 EEGL 1042
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 135/320 (42%), Gaps = 27/320 (8%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
+GK + + +F D+ QG VP T++ LI G +D+ +I M++ GG
Sbjct: 437 LGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKG---GQMDKVLAIIKEMVEKGG 493
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKY----YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
N+ + +Y + E ++ L+++ ++H
Sbjct: 494 ECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSA-------------FIH 540
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+ ++D E + LL+ M++ +++ K G +++A + LR +E
Sbjct: 541 N--GHVD-EAVKLLEV-MKKHECIPTVVTYTTLVDGLGKAGRLDEA-VSLLREMEKQGCE 595
Query: 366 PTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
P+ + M ++ K + +SL +F EM + A V Y +I LCK+++ + +
Sbjct: 596 PSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDV 655
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKN 483
E GM+PL+ +Y L + + D F+E E P+ +Y I + L
Sbjct: 656 FGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVK 715
Query: 484 AGNIEKAEEIFNHMHSDQTI 503
+ +++A ++ + M + +
Sbjct: 716 SNRVDEACKLVDSMKNQNIL 735
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 148/345 (42%), Gaps = 22/345 (6%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
FR +EW +Q Y + + + K R++ D+ + +G + E TF I++
Sbjct: 61 AFRFFEWAEKQRGYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKKGMLNVE-TFCIMM 119
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSL--HNSLFRALVSKPGGLSKYYLQQAE 280
Y A +DEA +N M + Y P+L N L AL +++A+
Sbjct: 120 RKYARA---NKVDEAVYTFNVMDK---YDVVPNLAAFNGLLSALCKSNN------VRKAQ 167
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
IF + + +K YS I L + + R + +EM +AG + ++
Sbjct: 168 EIFDAMKGQFVPDEKS-YS--ILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVD 224
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLG 398
V K G V++A + ++ ++ N PT +F+Y + Y +++ F EM ++
Sbjct: 225 VLCKAGRVDEAVEV-VKEMDVGNCRPT-SFIYSVLVHTYGVEHRIEDAIDTFLEMAKKGI 282
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
A V AY+ +I CK + + ++KE G+ P + + + + G DR
Sbjct: 283 KADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRAFR 342
Query: 459 AFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
F ++ C P+ Y + ++ +E A +I+ +M S Q +
Sbjct: 343 VFCRMIKLCEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFV 387
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+E + K ++ E+FREM E V Y ++++LCKA + ++KE
Sbjct: 188 LEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNC 247
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR----PNRTIYGIYLESLKNAGNIEK 489
+P Y L + Y G+ R+ A LE + + Y + + +
Sbjct: 248 RPTSFIYSVLVHTY---GVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKN 304
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+ M S+ + N+R+CN+I+S+ + G +A +++
Sbjct: 305 VHRVLKEMESN-GVAPNSRTCNVIISSMIGQGQTDRAFRVF 344
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 116/267 (43%), Gaps = 15/267 (5%)
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
GK + R++F +++ G P +T+ I++ A G +DEA + M +G
Sbjct: 192 GKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKA---GRVDEAVEVVKEM-DVGNC 247
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
+P + ++ LV G ++ ++ A F + G++ Y+ LI +
Sbjct: 248 RPT----SFIYSVLVHTYG--VEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNK 301
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE-SDNGIPTPA 369
+ + + KEM+ G ++ +G + A + + R+++ + T
Sbjct: 302 F--KNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRMIKLCEPDADTYT 359
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
+ KM + + E +L+I++ M+ + S+ + +I+ LC+ + +M+E +
Sbjct: 360 MMIKM--FCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDNAAKACVVMEEMI 417
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRL 456
E G++P ++ L + + G D L
Sbjct: 418 EKGIRPSRITFGRLRQLLIKEGREDVL 444
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 143/315 (45%), Gaps = 17/315 (5%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + + K+ K AK + +F+ +++ G VP+ + ++ LI Y L A I+
Sbjct: 340 LLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRD---LRGAFCIFE--- 393
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
Q+ RP + + AL++ GL K + +AE + + SG++ + ++ LI
Sbjct: 394 QMKSRHIRPD--HITYNALIN---GLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI-- 446
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
+Y E+ + +MQQ G + SV++ K G + +A ++ D
Sbjct: 447 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA 506
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
+ ++AY + G+ ++L + +M+ SAS+ Y+ +++ LC++ + + E L
Sbjct: 507 PNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 566
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLK 482
+ G++P + SY + + N G D+ L + + K RP + +L
Sbjct: 567 IYTLRNQGLRPDVVSYNTIISACCNKGDTDK-ALELLQEMNKYGIRPTLRTCHTLVSALA 625
Query: 483 NAGNIEKAEEIFNHM 497
+AG + E ++ M
Sbjct: 626 SAGRVHDMECLYQQM 640
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 131/308 (42%), Gaps = 28/308 (9%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
T + +C ++R+ F ++E M +H R D L + + K K D+ ++
Sbjct: 374 TLINGYC-QVRDLRGAFCIFEQMKSRHI-RPDHITYNALINGLCKLEMVTKAEDLVMEME 431
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
G PS TF+ LI AY +A G L++ ++ + M Q G ++ V
Sbjct: 432 KSGVDPSVETFNTLIDAYGTA---GQLEKCFTVLSDMQQKG------------IKSDVIS 476
Query: 268 PGGLSKYY-----LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKE 322
G + K + + +A I +++ + +Y+ +I +Y ++ D E+ LL ++
Sbjct: 477 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSII--DAYIESGDTEQALLLVEK 534
Query: 323 MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKI 380
M+ +G +L+ + +++AE+ L + G+ Y + A
Sbjct: 535 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL--RNQGLRPDVVSYNTIISACCNK 592
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G+ K+LE+ +EM + ++ H ++ L A E L ++ + ++P Y
Sbjct: 593 GDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 652
Query: 441 INLTNMYL 448
+ + Y+
Sbjct: 653 GIMVDAYV 660
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 83/199 (41%), Gaps = 4/199 (2%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA--KIGEFMKSLEIFREMQE 395
V++ C GD++ A R+ S+ P AF Y + + G+ +L++F EM +
Sbjct: 163 VVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVD 222
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
+ + Y+ +I+ K + E L + + G KP + +Y L + G D
Sbjct: 223 MGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDE 282
Query: 456 LHLAFSECLEKCR-PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
E P+ Y I + L G + +F + + + +C+I+L
Sbjct: 283 TRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAE-SLKKGVMLGAYTCSILL 341
Query: 515 SAYLSSGDFVKAEKIYDLM 533
+ G KA+++++++
Sbjct: 342 NGLCKDGKVAKAKQVFEML 360
>gi|242092154|ref|XP_002436567.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
gi|241914790|gb|EER87934.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
Length = 492
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 122/291 (41%), Gaps = 11/291 (3%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
++ +V+E M Q WYR + KL +GK +K K ++F +I++G P+ ++
Sbjct: 122 DSALKVFELMRDQVWYRPYIGIYIKLITMLGKCKKPEKAHELFQAMIDEGCAPNLESYTA 181
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ AY + G EA ++ +RM G QP ++ L ++ L Y ++ +
Sbjct: 182 LVSAYSRS---GRFHEAFNLLDRMKDTPGCQPDVKTYSILIKSC------LHAYDFEKVK 232
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ ++ +G+ Y+ LI + + +LLK M + + S LR
Sbjct: 233 SLLTDMARAGIRPNTVTYNTLIDAYGKARRFPEMESTLLK--MLSQNCKPDIWTMNSTLR 290
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
G +E E + + S + +++Y K + K + MQ+ S
Sbjct: 291 AFGSSGQIETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSW 350
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
++ Y+ +I+ +A + E E + + +KP + ++ Y G
Sbjct: 351 TIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAG 401
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 144/352 (40%), Gaps = 34/352 (9%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ ++++ +G P+ T LI G ++ A ++ ++++ Y+P + +
Sbjct: 273 VLEEMVGKGLKPNVYTHTSLIDGLCKI---GWMERAFRLFLKLVKSSSYKPNVHTYTVMI 329
Query: 262 RALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
GG K L +AE + ++ GL + Y+ LI H + D R L
Sbjct: 330 -------GGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFD--RAFELM 380
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYA 378
+M+ GF +++ K+G +++A K LR+ S G+ Y + +
Sbjct: 381 NKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKV-LRMATS-QGLHLDKVTYTILITEHC 438
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
K G +L++F++M E+ + Y II + C+ + E ++ L + + G+ P
Sbjct: 439 KQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQ 498
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+Y ++ Y LG F ++ C P+ YG + SL +E+A +F M
Sbjct: 499 TYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETM 558
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLD 549
L +L D + Y+ K I +++++LD
Sbjct: 559 ----------------LDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLD 594
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 88/199 (44%), Gaps = 3/199 (1%)
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSAS 401
C +EG E+A+ + + + + A+ + G F ++FR M E +
Sbjct: 191 CCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPN 250
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
+ Y I+ LC+ + +++E V G+KP + ++ +L + +G +R F
Sbjct: 251 MVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFL 310
Query: 462 ECLEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
+ ++ +PN Y + + G + +AE + M +Q + NT + ++ +
Sbjct: 311 KLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRM-VEQGLAPNTNTYTTLIHGHCK 369
Query: 520 SGDFVKAEKIYDLMCLKKY 538
G F +A ++ + M L+ +
Sbjct: 370 GGSFDRAFELMNKMKLEGF 388
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 143/329 (43%), Gaps = 23/329 (6%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D ++ +G P+ T+ +L+ G +DEA + N++ P P++ LF
Sbjct: 327 LVDRMLLRGFTPNSFTYGVLMHGLCR---MGKVDEARMLLNKV-------PNPNV--VLF 374
Query: 262 RALVSKPGGLSKYYLQQAEFIFH-NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
L++ G +S+ L +A+ + H ++L+ G Y+ LI + + R L
Sbjct: 375 NTLIN--GYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR--ELM 430
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
EMQ G E ++ KEG +E+A + S G+ A Y + A
Sbjct: 431 NEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM--SGKGLALNAVGYNCLISALC 488
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
K + +L +F +M + + ++ +I LCK + E L ++ + G+
Sbjct: 489 KDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 548
Query: 439 SYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+Y L + +L G M + L L C + Y +++L AGNIEK +F M
Sbjct: 549 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 608
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
S + + N SCNI+++ +G+ A
Sbjct: 609 MS-KGLNPNNISCNILINGLCRTGNIQHA 636
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 123/310 (39%), Gaps = 21/310 (6%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE----ACS 239
T L D KE + + R++ D++ +G + + ++ LI A C DE A +
Sbjct: 446 TILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL-------CKDEKVQDALN 498
Query: 240 IYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYS 299
++ M G +P NSL L ++K+ ++A ++ ++L G+ Y+
Sbjct: 499 MFGDMSS-KGCKPDIFTFNSLIFGLCK----VNKF--EEALGLYQDMLLEGVIANTITYN 551
Query: 300 GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
LI H++ + L +M G +++ + G++E + ++
Sbjct: 552 TLI--HAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM 609
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
+ + + G +LE R+M R + + Y+ +I LCK +
Sbjct: 610 SKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQ 669
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYL 478
+L + G+ P +Y L + + GM D HL S ++ PN + I +
Sbjct: 670 EALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILV 729
Query: 479 ESLKNAGNIE 488
+ G+ E
Sbjct: 730 SNFIKEGDQE 739
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 140/352 (39%), Gaps = 30/352 (8%)
Query: 206 IINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV 265
++N+ P+ + F+ LI Y+S +G LDEA ++ + + G P +N+L L
Sbjct: 362 LLNKVPNPNVVLFNTLINGYVS---RGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLC 418
Query: 266 SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
K YL A + + + G E Y+ LI + +++ R L EM
Sbjct: 419 KKG------YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL--DEMSG 470
Query: 326 AGFE---EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKI 380
G G L+S L K+ V+DA + + S G F + + K+
Sbjct: 471 KGLALNAVGYNCLISAL---CKDEKVQDALNMFGDM--SSKGCKPDIFTFNSLIFGLCKV 525
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
+F ++L ++++M A+ Y+ +I + + L+ + + G +Y
Sbjct: 526 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 585
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM-H 498
L G ++ F + + K PN I + L GNI+ A E M H
Sbjct: 586 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 645
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDY 550
T + T N +++ +G +A ++D K ++E + + Y
Sbjct: 646 RGLTPDIVTY--NSLINGLCKTGRAQEALNLFD-----KLQVEGICPDAITY 690
>gi|356558071|ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Glycine max]
Length = 647
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 179/444 (40%), Gaps = 61/444 (13%)
Query: 128 GGTLVRILNAQKKW-LRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALAT 184
G L R ++ KKW LR TY L +R ++ T FRVY M++ H YR D
Sbjct: 178 GEDLERCVSLVKKWDLRLNAYTYKCLLQAYLRALDSSTAFRVYLDMIR-HGYRLDIFGYN 236
Query: 185 KLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM 244
L D + K+ K + +F+D+ + P T+ I+I + DEA +++ M
Sbjct: 237 MLLDALAKDEKVCSYK-VFEDMKRRHCEPDVFTYTIMIRMTGKSSKT---DEALALFQAM 292
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
+ G P +N++ AL + +A +F ++ + ++ + YS ++ L
Sbjct: 293 LA-KGCTPNLIGYNTMIEALAKG------RMVDKAVLLFSKMVENDIQPNEFTYSVILNL 345
Query: 305 HSYQDNIDK--ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW------- 355
+ ++K + + KK + K++ +R +K G +A + +
Sbjct: 346 LVAEGKLNKLDNIVDISKKYIN-------KQIYAYFVRTLSKVGHASEAHRLFCNMWNFH 398
Query: 356 --------LRLLES------------------DNGIPTPAFVYK--MEAYAKIGEFMKSL 387
+ +LES + GI T +Y A ++ +
Sbjct: 399 DKGDKDACMSMLESLCSAGKMTEAIDLLNKIHEKGITTDTIMYNTVFTALGRLKQISHIH 458
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
+++ +M++ + Y+ +I +A ++ +E + KP + SY +L N
Sbjct: 459 DLYEKMKQDGPPPDIFTYNILISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINCL 518
Query: 448 LNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN 506
G D H+ F E EK P+ Y +E +E A +F+ M +++ N
Sbjct: 519 GKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEECTP-N 577
Query: 507 TRSCNIILSAYLSSGDFVKAEKIY 530
+ NI+L SG +A +Y
Sbjct: 578 LITYNILLDCLERSGRTAEAVDLY 601
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 173/429 (40%), Gaps = 68/429 (15%)
Query: 129 GTLVRILNAQKKW-LRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATK 185
G L R + KKW LR +Y L +R+R+ + F VY M++ Y D
Sbjct: 170 GDLDRCVGLVKKWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRC-GYSLDIFAFNM 228
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI----------------------- 222
L D + K++K K +F+D+ + P T+ I+I
Sbjct: 229 LLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKG 288
Query: 223 -----VAY---LSAPVQGCL-DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG---- 269
+AY + A +G + D+A ++++M++ G QP ++ L LV++
Sbjct: 289 FTLNLIAYNTMIEALAKGRMADKAVLLFSKMVE-NGCQPNEFTYSVLLNVLVAEGQLNKL 347
Query: 270 ----GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER-ISLLKKEMQ 324
+SK Y+ + + + S L + + + + D DK+ +S+L+
Sbjct: 348 DNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCS 407
Query: 325 QAGFEEGKEVLLSVLRVCAKEGDVE-DAEKTWLRLLES------------DNGIPTPAFV 371
E ++L C + + T L L+ +G P F
Sbjct: 408 SGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFT 467
Query: 372 YKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
Y + +Y + G +++IF E++ V +Y+ +I L K + + KE
Sbjct: 468 YNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQ 527
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECL-EKCRPNRTIYGIYLESLKNAG 485
E G+ P + +Y L + G D++ +A F E + E C PN Y I L+ L+ +G
Sbjct: 528 EKGLNPDVVTYSTLIECF---GKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSG 584
Query: 486 NIEKAEEIF 494
+A +++
Sbjct: 585 RTAEAVDLY 593
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 2/176 (1%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
+M + G+ +L AK+ V+ A K + + T + + K G
Sbjct: 213 DMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAG 272
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ +SL +F+ M E+ + ++ AY+ +IE L K + L + VE G +P +Y
Sbjct: 273 KTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYS 332
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
L N+ + G ++L + K N+ IY ++ +L G+ +A +F +M
Sbjct: 333 VLLNVLVAEGQLNKLDNIVE--MSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNM 386
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 150/356 (42%), Gaps = 32/356 (8%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
K K R+ + + VP + + LI A + +EA NRM + P
Sbjct: 282 KVGKWREALTLVETENFVPDTVFYTKLISGLCEASL---FEEAMDFLNRM-RATSCLPNV 337
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
+++L G L+K L + + + + ++ G I++ L+ H+Y + D
Sbjct: 338 VTYSTLL------CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV--HAYCTSGDHS 389
Query: 315 RISLLKKEMQQAGFEEGKEVL-LSVLRVCAKEG----DVED-AEKTWLRLLESD---NGI 365
L K+M + G G V + + +C + D+ D AEK + +L + N I
Sbjct: 390 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTE 422
+F G++ K+ + REM +G +P Y K++ LC A + EL
Sbjct: 450 NVSSFT---RCLCSAGKYEKAFSVIREM---IGQGFIPDTSTYSKVLNYLCNASKMELAF 503
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESL 481
L +E G+ + +Y + + + G+ ++ F+E E C PN Y + +
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
A + A E+F M S+ + N + + ++ + +G KA +I++ MC K
Sbjct: 564 LKAKKVSYANELFETMLSEGCLP-NIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 67/338 (19%), Positives = 131/338 (38%), Gaps = 33/338 (9%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E F V M+ Q + D + +K+ +Y+ K +F+++ G V T+ I
Sbjct: 465 EKAFSVIREMIGQGFIP-DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
++ ++ A G +++A +N M ++G P + +L A L + A
Sbjct: 524 MVDSFCKA---GLIEQARKWFNEMREVGC-TPNVVTYTALIHAY------LKAKKVSYAN 573
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+F +L+ G YS LI H ++K FE R
Sbjct: 574 ELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK----------ACQIFE----------R 613
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
+C + DV D + + + ++ + ++ + K ++ ++ M
Sbjct: 614 MCGSK-DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
+ Y +I+ LCK + + + + E E G + +Y +L + Y + D
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732
Query: 461 SECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
S+ LE C PN IY ++ L G ++A ++ M
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 66/355 (18%), Positives = 140/355 (39%), Gaps = 54/355 (15%)
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
+++ +C+ + + ++ +G PS F+ L+ AY ++ G A + +M++ G + P
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTS---GDHSYAYKLLKKMVKCG-HMP 405
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD---------------- 296
++N L ++ L+ L AE + +L +G+ + K
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 465
Query: 297 ---------IYSGLI-------WLHSYQDNIDKERIS-LLKKEMQQAGFEEGKEVLLSVL 339
I G I + +Y N K ++ LL +EM++ G ++
Sbjct: 466 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 525
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
K G +E A K + + E + + AY K + + E+F M
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 585
Query: 400 ASVPAYHKIIELLCKAEETEL----------------TESLMKEFVETGMKPLMPSYINL 443
++ Y +I+ CKA + E + K++ + +P + +Y L
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645
Query: 444 TNMYL-NLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ + + + + L + +E C PN+ +Y ++ L G +++A+E+ M
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 117/279 (41%), Gaps = 22/279 (7%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI------ 245
K +K + ++F+ ++++G +P+ +T+ LI + A G +++AC I+ RM
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA---GQVEKACQIFERMCGSKDVP 621
Query: 246 -------QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
Q RP++ + AL+ G + +++A + + G E + +Y
Sbjct: 622 DVDMYFKQYDDNSERPNVVT--YGALLD--GFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
LI +D+ + +K EM + GF S++ K + A K ++
Sbjct: 678 DALIDGLCKVGKLDEAQ--EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
LE+ + ++ K+G+ ++ ++ + M+E+ +V Y +I+ +
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
E L++ G+ P +Y L + G D H
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 834
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 149/356 (41%), Gaps = 32/356 (8%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
K K R+ + + VP + + LI A + +EA NRM + P
Sbjct: 282 KVGKWREALTLMETENFVPDTVFYTKLISGLCEASL---FEEAMDFLNRM-RATSCLPNV 337
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
+++L G L+K L + + + + ++ G I++ L+ H+Y + D
Sbjct: 338 VTYSTLL------CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV--HAYCTSGDHS 389
Query: 315 RISLLKKEMQQAGFEEGKEVL-LSVLRVCAKEGDV-----EDAEKTWLRLLESD---NGI 365
L K+M + G G V + + +C + + E AEK + +L + N I
Sbjct: 390 YAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKI 449
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTE 422
+F G++ K+ + REM +G +P Y K++ LC A + EL
Sbjct: 450 NVSSFT---RCLCSAGKYEKAFSVIREM---IGQGFIPDTSTYSKVLGYLCNASKMELAF 503
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESL 481
L +E G+ + +Y + + + G+ ++ F+E E C PN Y + +
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
A + A E+F M S+ + N + + ++ + +G KA +I++ MC K
Sbjct: 564 LKAKKVSYANELFETMLSEGCLP-NIVTYSALIDGHCKAGQMEKACQIFERMCGSK 618
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 135/329 (41%), Gaps = 36/329 (10%)
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
+++ +C+ + + ++ +G PS F+ L+ AY ++ G A + +M++ G + P
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTS---GDHSYAYKLLKKMVKCG-HTP 405
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
++N L ++ LS + L+ AE + +L +G+ + K S +
Sbjct: 406 GYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYE 465
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD----NGIPTP 368
K S+++ EM GF VL G + +A K L L + G+
Sbjct: 466 KA-FSVIR-EMIGQGFIPDTSTYSKVL------GYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 369 AFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
+ Y + +++ K G ++ + F EM+E + +V Y +I KA++ L +
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE-CLEKC-----------------R 468
+ G P + +Y L + + G ++ F C K R
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSER 637
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
PN IYG L+ +E+A ++ + M
Sbjct: 638 PNVVIYGALLDGFCKLHRVEEARKLLDAM 666
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 133/340 (39%), Gaps = 36/340 (10%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E F V M+ Q + D + +K+ Y+ K +F+++ G V T+ I
Sbjct: 465 EKAFSVIREMIGQGFIP-DTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
++ ++ A G +++A +N M ++G P + +L A L + A
Sbjct: 524 MVDSFCKA---GLIEQARKWFNEMREVGC-TPNVVTYTALIHAY------LKAKKVSYAN 573
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+F +L+ G YS LI H ++K FE R
Sbjct: 574 ELFETMLSEGCLPNIVTYSALIDGHCKAGQMEK----------ACQIFE----------R 613
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLG 398
+C + DV D + + + + DN +Y ++ + K+ ++ ++ M
Sbjct: 614 MCGSK-DVPDVD-MYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGC 671
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
+ Y +I+ LCK + + + + E E G + +Y +L + Y + D
Sbjct: 672 EPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 731
Query: 459 AFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
S+ LE C PN IY ++ L G ++A ++ M
Sbjct: 732 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 771
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 120/281 (42%), Gaps = 25/281 (8%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K +K + ++F+ ++++G +P+ +T+ LI + A G +++AC I+ RM G +
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA---GQMEKACQIFERMC---GSK 618
Query: 252 PRPSLH---------NS------LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
P + NS ++ AL+ G + +++A + + G E +
Sbjct: 619 DVPDVDMYFKQYDDDNSERPNVVIYGALLD--GFCKLHRVEEARKLLDAMSMEGCEPNQI 676
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
+Y LI +D+ + +K EM + GF S++ K + A K
Sbjct: 677 VYDALIDGLCKVGKLDEAQ--EVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 734
Query: 357 RLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
++LE+ + ++ K+G+ ++ ++ + M+E+ +V Y +I+ +
Sbjct: 735 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIG 794
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
+ E L++ G+ P +Y L + G D H
Sbjct: 795 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 835
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 16/235 (6%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D + +G PS +TF++L+ Y A G + A +N+M + G+QP +N L
Sbjct: 165 LLDMMRTEGTRPSIITFNLLVDGYGKA---GKMSNALPFFNQM-KAAGFQPSAVTYNMLI 220
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
G + +A ++ GLE K Y+ LI + ++++ K +L
Sbjct: 221 ------AGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKA-FEILAG 273
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME--AYAK 379
M++AG E ++R EG+++DA K + + E G+ +Y M Y +
Sbjct: 274 -MEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGE--KGVEPSNVIYDMMIYGYGR 330
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
G K+L++ EM+++ + +Y I +LCK ++ + E+L+ + V G++
Sbjct: 331 EGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQ 385
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 122/325 (37%), Gaps = 56/325 (17%)
Query: 178 FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEA 237
D T L + K A+ R +FD++ G P+E+T+ L+ Y + G ++
Sbjct: 36 LDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFT---HGQREKG 92
Query: 238 CSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI 297
+++ M + GG +P +N L + + EF
Sbjct: 93 FALFEEM-RRGGVEPNLYTYNCLI-----------GEWCRTGEF---------------- 124
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
ER L EM G +++ + G + DA K L
Sbjct: 125 ----------------ERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAK-LLD 167
Query: 358 LLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
++ ++ P+ F ++ Y K G+ +L F +M+ S Y+ +I C+A
Sbjct: 168 MMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRAR 227
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS--ECLEKC--RPNRT 472
+ + + E G++P +Y L + + + + AF +EK +
Sbjct: 228 DMTRANRALSDMKERGLEPTKVTYTILIDSFAR---ENHMGKAFEILAGMEKAGLEVDAH 284
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHM 497
YG+ + +L GN++ A ++F M
Sbjct: 285 TYGVLVRALCMEGNMKDARKLFQSM 309
>gi|242053311|ref|XP_002455801.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
gi|241927776|gb|EES00921.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
Length = 642
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 139/329 (42%), Gaps = 42/329 (12%)
Query: 132 VRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMG 191
+ LN ++ L+ +D + HC R + +V+EWM ++ + A + Y+G
Sbjct: 68 IAALNRFEEVLQTQDCNIILRHCGDTRRWDDLSKVFEWMQEREMT--NAASYSSYFKYLG 125
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIV-AYLSAPVQ-GCLDEACSIYNRMIQLGG 249
R A+ ++ I +Q M H+ + + L V+ G LD + +Y+ MI+ G
Sbjct: 126 LSRDPARALQVYGAIKDQ-----TMKVHVSVCNSVLGCLVKNGRLDSSFKLYDEMIR-EG 179
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKY------------------------------YLQQA 279
P P +++L + G +K Y ++A
Sbjct: 180 LSPDPFTYSTLLSGCMKLKQGYTKAMELINDMKSRGLQMDIVIYGTLLAICASHNYCEEA 239
Query: 280 EFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVL 339
E F + G YS L L++Y +N D E+ LL K+++ +G K +L ++L
Sbjct: 240 EVYFQKMKDEGHCPNLFHYSSL--LNAYSENSDYEKAELLMKDLRSSGLTPNKVILTTLL 297
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
+V +K G E A++ L S + ++ K G+ ++ +F EM+E+
Sbjct: 298 KVYSKGGLFEKAKELLTELEASGFAQDEMPYCILIDGLVKGGKIQEAKILFNEMKEKGVK 357
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEF 428
+ A+ +I L + E ++ L KEF
Sbjct: 358 SDGYAFSIMISALHRGGHHEESKQLAKEF 386
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 133/326 (40%), Gaps = 19/326 (5%)
Query: 178 FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEA 237
D + T L D++ KE K + +D+F ++ P+ +T+ +LI A A G +D A
Sbjct: 347 MDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKA---GNVDGA 403
Query: 238 CSIYNRMIQLGGYQPRPSLHNSLFRALVSKP--GGLSKYYLQQAE-FIFHNLLTSGLEIQ 294
+ + M + P +S+ LV + G + Y + E I N++T G I
Sbjct: 404 EQVLSEM-EEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVID 462
Query: 295 KDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKT 354
+ +E + EM G E K ++ S++ K G +E AE
Sbjct: 463 GSFKC-----------LGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEAL 511
Query: 355 WLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCK 414
+ + E + + ++ K G + ++ +E+ E+ Y+ I LC
Sbjct: 512 FREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCM 571
Query: 415 AEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTI 473
+++ ES ++E TG+KP +Y + G + L L +PN
Sbjct: 572 LGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLIT 631
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHS 499
Y + L AG +EKA+ + N M S
Sbjct: 632 YSTLIVGLFEAGAVEKAKYLLNEMSS 657
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Query: 379 KIGEFMKSLEIFREMQERLGSA-SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
K G F ++ +FREM E++G+A + Y +I+ L KA+ + SL+ E V G+ +
Sbjct: 291 KDGRFSEAYALFREM-EKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDL 349
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
Y L + G D F L + PN Y + +++L AGN++ AE++ +
Sbjct: 350 IMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSE 409
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSG 521
M +++I N + + I++ + G
Sbjct: 410 ME-EKSISPNVVTFSSIINGLVKRG 433
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 13/186 (6%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
+ F Y+ M+ H + A L + + + + +++ +G PS +T+ I
Sbjct: 751 DNAFSTYDQMLY-HGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDI 809
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ Y Q EA +Y M+ G+ P+ S +N+L SK G +S QA+
Sbjct: 810 LVTGYGK---QSNKVEAVRLYCEMVG-KGFLPKVSTYNALISDF-SKVGMMS-----QAK 859
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+F+ + G+ Y L+ S N + R L K+M++ GF K L S+ R
Sbjct: 860 ELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFL--KDMKEKGFSPSKGTLSSISR 917
Query: 341 VCAKEG 346
+K G
Sbjct: 918 AFSKPG 923
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 118/256 (46%), Gaps = 14/256 (5%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D + L + GK R+ K D+ ++ + G +P ++++L+ AY + G + EA
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKS---GSIKEAM 337
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
++++M Q G P + ++ L G S Y +F + +S + Y
Sbjct: 338 GVFHQM-QAAGCTPNANTYSVLLNLF-----GQSGRY-DDVRQLFLEMKSSNTDPDAATY 390
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+ LI + + KE ++L +M + E E ++ C K G EDA K L+
Sbjct: 391 NILIEVFG-EGGYFKEVVTLFH-DMVEENIEPDMETYEGIIFACGKGGLHEDARKI-LQY 447
Query: 359 LESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
+ +++ +P+ A+ +EA+ + + ++L F M E + S+ YH ++ +
Sbjct: 448 MTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGL 507
Query: 418 TELTESLMKEFVETGM 433
+ +E+++ V++G+
Sbjct: 508 VKESEAILSRLVDSGI 523
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 104/529 (19%), Positives = 192/529 (36%), Gaps = 78/529 (14%)
Query: 94 LGEPVVEVIELEELPEQWRRAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVH 153
LG P V V E+ + L LP G++ R L+ K L D +
Sbjct: 60 LGNPSVSV---EKGKYSYDVESLINKLSSLPPR--GSIARCLDIFKNKLSLNDFALVFKE 114
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
+ + R++++M +Q W + + + T + +G+E KC ++FD++ +QG
Sbjct: 115 FAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSR 174
Query: 214 SEMTFHILIVAY------------LSAPVQGCLDEACSIYNRMIQ------------LG- 248
S ++ LI AY L + + YN +I LG
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGL 234
Query: 249 -------GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGL---------- 291
G QP +N+L A + G +AE +F + G+
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLG------DEAEMVFRTMNDGGIVPDLTTYSHL 288
Query: 292 --------EIQK---------------DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
++K DI S + L +Y + + + +MQ AG
Sbjct: 289 VETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGC 348
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
+L + + G +D + +L + S+ + +E + + G F + +
Sbjct: 349 TPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVT 408
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+F +M E + Y II K E +++ + P +Y + +
Sbjct: 409 LFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFG 468
Query: 449 NLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
+++ +AF+ E P+ Y L S G ++++E I + + D I N
Sbjct: 469 QAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRL-VDSGIPRNR 527
Query: 508 RSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNR 556
+ N + AY G F +A K Y M + + + +E + V S R
Sbjct: 528 DTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFAR 576
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 163/376 (43%), Gaps = 22/376 (5%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
++V E M+++ F T L + + + K R++F ++ G P+ +T+ LI
Sbjct: 107 AYKVLEKMVEESIVPNVFTY-TILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLI 165
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY-LQQAEF 281
+LS G +DEA + MI+ Q L + + GGL K L A
Sbjct: 166 -QHLSRA--GEIDEALRV---MIE----QRSLELPTDVI-TCTTIVGGLCKASRLDDALK 214
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER-ISLLKKEMQQAGFEEGKEVLLSVLR 340
+ G+ + YS L+ H ++ + + +R I ++E + G L
Sbjct: 215 FMEEMRQMGVRPNEVTYSNLV--HGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLD 272
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLG 398
K G ++ A K+ L +S G+ Y M +A+ G+F SLE+ +M+
Sbjct: 273 ALCKAGYLDRARKSVEELRQS--GVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGV 330
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
V Y +I +LCK + + L++ G P + +Y ++ + G D +H
Sbjct: 331 KPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHR 390
Query: 459 AFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
+ L+ +C P+ Y I + L AG ++ A ++F + S + G + + ++++++
Sbjct: 391 VYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSRE-GPDAAAYSMVITSL 449
Query: 518 LSSGDFVKAEKIYDLM 533
+G +A +Y M
Sbjct: 450 CRAGKLEEACGMYHGM 465
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 133/298 (44%), Gaps = 15/298 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ G VP TF+ LI AY G ++A ++Y RM+ G P S +N++
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRC---GSFEQAMTVYRRMLD-AGVTPDLSTYNTVL 531
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
AL GG+ +Q+E + + + + Y L LH+Y + + + L +
Sbjct: 532 AALAR--GGM----WEQSEKVLAEMEDGRCKPNELTYCSL--LHAYANGKEIGLMHSLAE 583
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
E+ E +L +++ VC+K + +AE+ + L E + Y +
Sbjct: 584 EVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQ 643
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
K+ E+ M+ER + S+ Y+ ++ + ++ + +E +++E + G+KP + SY
Sbjct: 644 MVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYN 703
Query: 442 NLTNMYL-NLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ Y N M D + FSE + P+ Y ++ S E+A + +M
Sbjct: 704 TVIYAYCRNTRMRDASRI-FSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/410 (19%), Positives = 164/410 (40%), Gaps = 25/410 (6%)
Query: 150 LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQ 209
L C R ++ +V+E M + + D L D GK + + + +++
Sbjct: 285 LITCCKRGSLHQEAAQVFEEM-KAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELN 343
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG 269
G PS +T++ LI AY G LDEA + N+M + G +P + +L + G
Sbjct: 344 GFSPSIVTYNSLISAYAR---DGMLDEAMELKNQMAE-KGTKPDVFTYTTLLSGF-ERAG 398
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK--KEMQQAG 327
+ + A IF + +G + ++ I ++ + + ++K E+ G
Sbjct: 399 KV-----ESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKF----VDMMKIFDEINVCG 449
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSL 387
++L V + G + + + + F + AY++ G F +++
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
++R M + + + Y+ ++ L + E +E ++ E + KP +Y +L + Y
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 448 LN---LG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
N +G MH +S +E P + + + +AE F+ + ++
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIE---PRAVLLKTLVLVCSKCDLLPEAERAFSELK-ERGF 625
Query: 504 GVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLS 553
+ + N ++S Y KA ++ D M + + A L Y+ S
Sbjct: 626 SPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHS 675
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 160/386 (41%), Gaps = 53/386 (13%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L ++G+ K + ++++ ++++G PS ++++ LI+ + +GC+D+A S+ ++
Sbjct: 435 LLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCK---KGCMDKAYSMLKSIL 491
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ G +P + L K ++A +F ++ + + ++ +I
Sbjct: 492 E-RGLKPNAVTYTLLIDGFFKKGDS------ERAFVVFEQMMAANIAPTDHTFNTVINGL 544
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+ + + L + GF S++ KEG V+ A + + ES GI
Sbjct: 545 GKTGRVSETQDKL--NNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCES--GI 600
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
Y ++ K + +LE+ +M+ + V AY +I+ CK + E
Sbjct: 601 SPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASK 660
Query: 424 LMKEFVETGMKP-------LMPSYINLTNMYLNLGMHD---------------------- 454
E ++ G+ P ++ +I+L NM L +H
Sbjct: 661 FFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLL 720
Query: 455 ---RLHLA---FSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
+L LA +SE L K P+ +Y + + L N G +E A +I M + I +
Sbjct: 721 KEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNN-ITPSV 779
Query: 508 RSCNIILSAYLSSGDFVKAEKIYDLM 533
NI+++ G+ +A +++D M
Sbjct: 780 LVYNILIAGNFREGNLQEAFRLHDEM 805
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 149/405 (36%), Gaps = 89/405 (21%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGC-----LDEACSIYNRMIQLGGYQPRPSL 256
+FD+++ G VP + F +LI GC +++A +Y RM +L G QP +
Sbjct: 347 LFDEVVEGGVVPDVVIFSVLI--------NGCSKVGDMEKAYELYTRM-KLMGIQPNVFI 397
Query: 257 HNSL------------------------------FRALVSKPGGLSKYYLQQAEFIFHNL 286
NSL + L+ G L K + +A ++ +
Sbjct: 398 VNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGK--VNEACNLWEKM 455
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDK--------------------------------- 313
++ G+ Y+ LI H + +DK
Sbjct: 456 VSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDS 515
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
ER ++ ++M A +V+ K G V + + ++ G + + Y
Sbjct: 516 ERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQ--GFVSTSITYN 573
Query: 374 --MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
++ + K G +L +REM E S V Y +I+ LCK+ + L + +
Sbjct: 574 SIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYK 633
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLA--FSECLE-KCRPNRTIYGIYLESLKNAGNIE 488
GMK + +Y L + + MHD + F+E L+ PN +Y + + N+E
Sbjct: 634 GMKLDVVAYSALIDGFCK--MHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNME 691
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A + M ++ + + + I+ L G A +Y M
Sbjct: 692 AALNLHQEMIKNK-VPCDLQVYTSIIGGLLKEGKLSLALDLYSEM 735
Score = 42.7 bits (99), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL----RLLESDNGIPTPAFVYKM 374
L EM + G L V+R C KEG E+ EK + R LE D A+ +
Sbjct: 207 LYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVD----AAAYSILV 262
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM- 433
+A + + + E+ +EM+E S Y +I K L E V G+
Sbjct: 263 QAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLP 322
Query: 434 ------KPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGN 486
+ LM Y L ++ L L + F E +E P+ I+ + + G+
Sbjct: 323 MNVIVTRSLMKGYCVLGDVNLALQL-------FDEVVEGGVVPDVVIFSVLINGCSKVGD 375
Query: 487 IEKAEEIFNHM 497
+EKA E++ M
Sbjct: 376 MEKAYELYTRM 386
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 149/337 (44%), Gaps = 26/337 (7%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + K ++ + D++ +G VP+E+T++ LI ++G LD+A S+ +M+
Sbjct: 274 LIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC---LKGKLDKALSLLEKMV 330
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT---SGLEIQKDIYSGLI 302
P + ++ LV + ++AE H L++ G + + IYS LI
Sbjct: 331 S-SKCVPNQVTYGTIINGLVKQ---------RRAEDGVHILMSMEERGQKANEYIYSSLI 380
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
E L KEM + G + V + + ++ ++AE +L
Sbjct: 381 --SGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK- 437
Query: 363 NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
G AF Y M+ + K G+ K++ +++EM + +V ++ LC++
Sbjct: 438 -GFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLRE 496
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE--CLE-KCRPNRTIYGIY 477
++ + G+KP + +Y ++ ++G D+ F E C E K RP+ Y I
Sbjct: 497 ALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNIL 556
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
+L N+ +A ++ N M D+ ++ +CNI L
Sbjct: 557 FNALCRQDNLTRAIDLLNSML-DEGCDPDSLTCNIFL 592
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 14/267 (5%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
+DEA + + M Q G P P N L AL SK G LS+ A + N+ G
Sbjct: 249 VDEAVFLLDEM-QAEGCLPNPVTFNVLIDAL-SKNGDLSR-----AAKLVDNMFLKGCVP 301
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
+ Y+ LI + +DK +SLL+K M + + +++ K+ ED
Sbjct: 302 NEVTYNTLIHGLCLKGKLDKA-LSLLEK-MVSSKCVPNQVTYGTIINGLVKQRRAEDGVH 359
Query: 354 TWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
+ + E G ++Y + K G+ ++ +++EM E+ +V Y I+
Sbjct: 360 ILMSMEE--RGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDG 417
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPN 470
LC+ E+ + E +++E + G P +Y +L + G + L + E + + R N
Sbjct: 418 LCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHN 477
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ L L +G + +A ++ HM
Sbjct: 478 VVCCSVLLNGLCESGRLREALTVWTHM 504
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 4/171 (2%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDN-GIPTPAFVYKM--EAYAKIGEFMKSLEIFREM 393
SVL V +EGD A K +L + +++ G Y + +A K+G+ ++++ FREM
Sbjct: 165 SVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREM 224
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
+ + V Y ++ LCK + L+ E G P ++ L + G
Sbjct: 225 PLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDL 284
Query: 454 DR-LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
R L + L+ C PN Y + L G ++KA + M S + +
Sbjct: 285 SRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCV 335
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 148/397 (37%), Gaps = 43/397 (10%)
Query: 165 RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
++++ Q Y+ A +L + R+F + D + +GRV +E F ++ A
Sbjct: 74 QIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKA 133
Query: 225 YLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS---KYYLQ---- 277
A + G EA + ++RM + NS+ ++ + G S K+YL
Sbjct: 134 CGKAHLPG---EAVNFFHRMANDLHCKQTVKSFNSVLNVIIQE-GDFSYAFKFYLHVFGA 189
Query: 278 -----QAEFIFHNLLTSGL----EIQ-----------KDIYSGLIWLHSYQDNIDKER-- 315
Q + +NL+ L +I K+ + + + + KER
Sbjct: 190 NSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRV 249
Query: 316 --ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
L EMQ G ++ +K GD+ A K + +
Sbjct: 250 DEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTL 309
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTESLMKEFVE 430
+ G+ K+L + +M + S VP Y II L K E ++ E
Sbjct: 310 IHGLCLKGKLDKALSLLEKM---VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEE 366
Query: 431 TGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEK 489
G K Y +L + G + + E EK C+PN +YG +++ L ++
Sbjct: 367 RGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDE 426
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
AE+I M S + N + + ++ + GD KA
Sbjct: 427 AEDILQEMLSKGFLP-NAFTYSSLMKGFFKKGDSQKA 462
>gi|297734042|emb|CBI15289.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 133/316 (42%), Gaps = 39/316 (12%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+I+++ + W+ +Q ++ D T + +G+ R+F + +++ G P+
Sbjct: 364 QIQDHPVALGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNV 423
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG----GL 271
+T++ LI +Y A L+EA S+++RM Q G QP + +L + +K G L
Sbjct: 424 VTYNRLIHSYGRA---NYLNEAVSVFDRM-QEAGCQPDRVTYCTLID-IHAKAGFLDVAL 478
Query: 272 SKY--------------------------YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
Y +L A +F ++ G Y+ +I L
Sbjct: 479 HMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQ 538
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+ N L ++MQ AGF+ K V+ V G +E+AE + ++ N +
Sbjct: 539 AKARNYPTAL--ELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTE-MKRKNWV 595
Query: 366 PT-PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
P P + ++ + K+G KS E ++ M +VP + ++ + +L
Sbjct: 596 PDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNL 655
Query: 425 MKEFVETGMKPLMPSY 440
++ + G++P + +Y
Sbjct: 656 LQSMLRLGLQPSLQTY 671
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 101/217 (46%), Gaps = 4/217 (1%)
Query: 304 LHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+HSY + N E +S+ + MQ+AG + + +++ + AK G ++ A + ++ E+
Sbjct: 430 IHSYGRANYLNEAVSVFDR-MQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAH 488
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
T + + K G + ++F EM ++ ++ Y+ +I L KA
Sbjct: 489 LSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTAL 548
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESL 481
L ++ G +P +Y + + + G + F+E K P+ +YG+ ++
Sbjct: 549 ELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLW 608
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
GN+EK+ E + M + + N +CN +LSA+L
Sbjct: 609 GKVGNVEKSWEWYQAM-LNAGLCPNVPTCNSLLSAFL 644
>gi|255553476|ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543051|gb|EEF44586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 160/391 (40%), Gaps = 16/391 (4%)
Query: 158 RENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMT 217
R ++ +++E + +QHWY TKL +GK R+ + R +F+ + +G P+
Sbjct: 106 RRWKSALKIFELLRKQHWYEPRCQTYTKLLMMLGKCRQPEEARLLFEVMQTEGLRPTIDV 165
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
+ L+ AY + G L +A S + M + +P ++ L L ++ L
Sbjct: 166 YTALVSAYGES---GLLAKAFSTVDEMKSVSDCKPDVYTYSVLINICTK----LHRFDLI 218
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
I + G+E ++ +I + + + +E + L ++ S
Sbjct: 219 GR--ILSEMSYLGVECSTVTFNTIINGYG-KAKMFREMENSLTNMIEIGNSVPDLFTFNS 275
Query: 338 VLRVCAKEGDVEDAEKTW--LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
V+ G +E EK + +L+ I T F +++Y K G + K + M++
Sbjct: 276 VIGAYGNSGRIEKMEKWYNEFQLMGISPDIKT--FNILIKSYGKAGMYEKINSVIEFMKK 333
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
R +V Y+ IIE +A + E + K GMKP +Y +L + Y G+ +
Sbjct: 334 RFFPPTVVTYNIIIETFGRAGDIENMDEYFKTMKHLGMKPNAITYCSLVSAYSKAGLLMK 393
Query: 456 LHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
++ + + T + + + AG+++K E+F M + + N +I
Sbjct: 394 VNSILRQVENSDVVLDTTFFNCIINAYGQAGDVDKMAELFLEMRERECMPDNVTFATMI- 452
Query: 515 SAYLSSGDFVKAEKIYDLMCLKKYEIESAWM 545
AY G A+ + +M K WM
Sbjct: 453 QAYRGQGMTEAAQALEKMMLAAKGNSGGTWM 483
>gi|357125122|ref|XP_003564244.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Brachypodium distachyon]
Length = 502
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 119/287 (41%), Gaps = 11/287 (3%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E+ +V+E M Q WYR + KL +GK ++ K ++F ++++G P+ ++
Sbjct: 132 ESALKVFELMRDQVWYRPYVGIYIKLITMLGKCKQPGKAHELFQAMVDEGCAPNLESYTA 191
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ AY + G D A S+ +RM G +P ++ L ++ L Y + +
Sbjct: 192 LVSAYSRS---GSFDRAFSLLDRMKATPGCRPDVQTYSILIKSC------LHAYDFDKVK 242
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ ++ G+ Y+ L+ + + +LL EM + + S LR
Sbjct: 243 DLLADMACGGIRPNTVTYNTLVDAYGKAGRFAEMESTLL--EMLSEKCKPDVWTMNSTLR 300
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
G +E E + + S + +++Y K + K + MQ+ S
Sbjct: 301 AFGSSGQIEMMESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSW 360
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
++ Y+ +I+ +A + E E + + +KP + +L Y
Sbjct: 361 TIVTYNVVIDAFGRAGDLEQMEYIFRLMKSDRIKPNCVTLCSLIRAY 407
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 119/286 (41%), Gaps = 19/286 (6%)
Query: 250 YQPRPSLHNSLFRAL--VSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
Y+P ++ L L +PG +A +F ++ G + Y+ L+ +S
Sbjct: 147 YRPYVGIYIKLITMLGKCKQPG--------KAHELFQAMVDEGCAPNLESYTALVSAYSR 198
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+ D+ SLL + G + +++ C D + + + + GI
Sbjct: 199 SGSFDRA-FSLLDRMKATPGCRPDVQTYSILIKSCLHAYDFDKVKDLLADM--ACGGIRP 255
Query: 368 PAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
Y ++AY K G F + EM V + + + + E+ ES
Sbjct: 256 NTVTYNTLVDAYGKAGRFAEMESTLLEMLSEKCKPDVWTMNSTLRAFGSSGQIEMMESCY 315
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI--YGIYLESLKN 483
++F +G+ P + +Y L + Y M++++ A E ++K + TI Y + +++
Sbjct: 316 EKFQASGISPNIKTYNILLDSYGKAKMYEKMG-AVMEYMQKYYYSWTIVTYNVVIDAFGR 374
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
AG++E+ E IF M SD+ I N + ++ AY + K E +
Sbjct: 375 AGDLEQMEYIFRLMKSDR-IKPNCVTLCSLIRAYGRADQVKKIETV 419
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 139/342 (40%), Gaps = 28/342 (8%)
Query: 286 LLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL-LSVLRVCAK 344
++T G I++ L+ H+Y + D L K+M G++ G V + + +C+
Sbjct: 2 MITEGCYPSPMIFNSLV--HAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICST 59
Query: 345 EG-----DVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
E + AE+ + +LE + IG+F K+ + REM +
Sbjct: 60 EDLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFI 119
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
Y K+I LC A + E L +E G+ P + +Y L + + +G+ ++
Sbjct: 120 PDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNW 179
Query: 460 FSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
F E + C PN Y + + + +A EIF M S+ + N + ++ +
Sbjct: 180 FDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVP-NIVTYTALIDGHC 238
Query: 519 SSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLI-- 576
+G+ KA +IY M K +I +D + E+K+P N++
Sbjct: 239 KAGETEKACQIYARMKNDKVDIPD-----VDIYFRIVDSELKEP-----------NVVTY 282
Query: 577 GLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQY 618
G L+ GLC K R ++ E + ++ L D +
Sbjct: 283 GALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGF 324
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 121/302 (40%), Gaps = 15/302 (4%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
MQQ + T L K RK ++ +IF+ +++ G VP+ +T+ LI + A
Sbjct: 183 MQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA-- 240
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG---------GLSKYY-LQQAE 280
G ++AC IY RM P ++ + + + +P GL K + +++A
Sbjct: 241 -GETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEAR 299
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ + G E + IY LI +D+ + K M G S++
Sbjct: 300 DLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTK--MLGHGCSPNVYTYSSLID 357
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
K+ ++ A K ++LE+ + ++ K+G+ ++ + M+E+
Sbjct: 358 KLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYP 417
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
+V Y +I+ KA + L++ G P +Y L N G+ D H
Sbjct: 418 NVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLL 477
Query: 461 SE 462
E
Sbjct: 478 EE 479
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 143/365 (39%), Gaps = 39/365 (10%)
Query: 157 IRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEM 216
I + E + V MM + + D + +K+ Y+ K K +F ++ G P
Sbjct: 100 IGKFEKAYNVIREMMSKGFIP-DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVY 158
Query: 217 TFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYL 276
T+ L+ + G +++A + ++ M Q G P + +L A L L
Sbjct: 159 TYTTLLDRFCKV---GLIEQARNWFDEM-QQDGCAPNVVTYTALIHAY------LKTRKL 208
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY---------------QDNIDKERISLLKK 321
+A IF +L++G Y+ LI H D +D + + +
Sbjct: 209 SRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFR 268
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE--SDNGIPTPAFVYK--MEAY 377
+ E +++ K V++A LLE S G +Y ++ +
Sbjct: 269 IVDSELKEPNVVTYGALVDGLCKAHKVKEARD----LLETMSLEGCEPNQIIYDALIDGF 324
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
K+G+ ++ E+F +M S +V Y +I+ L K + +L ++ + +E P +
Sbjct: 325 CKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNV 384
Query: 438 PSYINLTNMYLNLGMHD---RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
Y + + +G D RL L E + C PN Y ++ AG +++ E+
Sbjct: 385 VIYTEMVDGLCKVGKTDEAYRLMLMMEE--KGCYPNVVTYTAMIDGFGKAGRVDRCLELL 442
Query: 495 NHMHS 499
M S
Sbjct: 443 QLMTS 447
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/408 (20%), Positives = 160/408 (39%), Gaps = 52/408 (12%)
Query: 129 GTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLAD 188
G++ R ++ + L +D + + + R++++M +Q W + + T +
Sbjct: 31 GSVTRCMDLYRSKLTMQDFSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIG 90
Query: 189 YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG 248
MG+E KC +IF+D+ + F LI AY + G
Sbjct: 91 IMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAY-------------------GRNG 131
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
Y+ SLH L+++ + E + NL+T + GL W
Sbjct: 132 QYE--ASLH------LLAR---------MKKERVEPNLITYNTVLNACSKGGLDW----- 169
Query: 309 DNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
E + L +M+ G + ++L C+ G VE A + + ES G+
Sbjct: 170 -----EGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNES--GVVAD 222
Query: 369 AFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
A YK ++ +A + + E+ REM++ S + Y+ +IE A + K
Sbjct: 223 AVTYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFK 282
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAG 485
+ G P + +Y L +Y N G +++ FS+ E P Y ++ G
Sbjct: 283 QMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGG 342
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+++ +F+ M D + + + + +LS G +A KI+ M
Sbjct: 343 YFQESINLFHDM-VDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHM 389
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 130/315 (41%), Gaps = 22/315 (6%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + + ++ ++ ++G P ++ LI AY A G + A ++ +M
Sbjct: 229 LVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADA---GNVHGAAGVFKQM- 284
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
Q GG P +++L R ++ +Q +F ++ Y+ LI +
Sbjct: 285 QRGGCAPDVETYSTLLRIYGNQG------CFEQVRSLFSDMKELSTPPTVATYNSLIQVF 338
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+ +E I+L +M +G + ++L VC + G +A K +L +++
Sbjct: 339 G-EGGYFQESINLFH-DMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTP 396
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
A + +Y K+ + +L + ++E V AY +I+ K S +
Sbjct: 397 SLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGSTL 456
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK------CRPNRTIYGIYLE 479
+ G + + S ++ Y +G+HD FSE +K R + T+ G+Y
Sbjct: 457 YAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQKEGSEVDERTHETLLGVYC- 515
Query: 480 SLKNAGNIEKAEEIF 494
+ G +E+A+E F
Sbjct: 516 ---DMGLLEEAKEEF 527
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 153/337 (45%), Gaps = 26/337 (7%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + K ++ + D++ +G VP+E+T++ LI ++G LD+A S+ +M+
Sbjct: 250 LIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC---LKGKLDKALSLLEKMV 306
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT---SGLEIQKDIYSGLI 302
P + ++ LV + ++AE H L++ G + + IYS LI
Sbjct: 307 S-SKCVPNQVTYGTIINGLVKQ---------RRAEDGVHILMSMEERGQKANEYIYSSLI 356
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+++ + + L K EM + G + V + + ++ ++AE +L
Sbjct: 357 S-GLFKEGKSENAVRLWK-EMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK- 413
Query: 363 NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
G AF Y M+ + K G+ K++ +++EM + +V ++ LC++
Sbjct: 414 -GFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLRE 472
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE--CLE-KCRPNRTIYGIY 477
++ + G+KP + +Y ++ ++G D+ F E C E K RP+ Y I
Sbjct: 473 ALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNIL 532
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
+L N+ +A ++ N M D+ ++ +CNI L
Sbjct: 533 FNALCRQDNLTRAIDLLNSML-DEGCDPDSLTCNIFL 568
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 14/267 (5%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
+DEA + + M Q G P P N L AL SK G LS+ A + N+ G
Sbjct: 225 VDEAVFLLDEM-QAEGCLPNPVTFNVLIDAL-SKNGDLSR-----AAKLVDNMFLKGCVP 277
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
+ Y+ LI + +DK +SLL+K M + + +++ K+ ED
Sbjct: 278 NEVTYNTLIHGLCLKGKLDKA-LSLLEK-MVSSKCVPNQVTYGTIINGLVKQRRAEDGVH 335
Query: 354 TWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
+ + E G ++Y + K G+ ++ +++EM E+ +V Y I+
Sbjct: 336 ILMSMEE--RGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDG 393
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPN 470
LC+ E+ + E +++E + G P +Y +L + G + L + E + + R N
Sbjct: 394 LCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHN 453
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ L L +G + +A ++ HM
Sbjct: 454 VVCCSVLLNGLCESGRLREALTVWTHM 480
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 4/171 (2%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDN-GIPTPAFVYKM--EAYAKIGEFMKSLEIFREM 393
SVL V +EGD A K +L + +++ G Y + +A K+G+ ++++ FREM
Sbjct: 141 SVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREM 200
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
+ + V Y ++ LCK + L+ E G P ++ L + G
Sbjct: 201 PLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDL 260
Query: 454 DR-LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
R L + L+ C PN Y + L G ++KA + M S + +
Sbjct: 261 SRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCV 311
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 148/397 (37%), Gaps = 43/397 (10%)
Query: 165 RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
++++ Q Y+ A +L + R+F + D + +GRV +E F ++ A
Sbjct: 50 QIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKA 109
Query: 225 YLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS---KYYLQ---- 277
A + G EA + ++RM + NS+ ++ + G S K+YL
Sbjct: 110 CGKAHLPG---EAVNFFHRMANDLHCKQTVKSFNSVLNVIIQE-GDFSYAFKFYLHVFGA 165
Query: 278 -----QAEFIFHNLLTSGL----EIQ-----------KDIYSGLIWLHSYQDNIDKER-- 315
Q + +NL+ L +I K+ + + + + KER
Sbjct: 166 NSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRV 225
Query: 316 --ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
L EMQ G ++ +K GD+ A K + +
Sbjct: 226 DEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTL 285
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTESLMKEFVE 430
+ G+ K+L + +M + S VP Y II L K E ++ E
Sbjct: 286 IHGLCLKGKLDKALSLLEKM---VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEE 342
Query: 431 TGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEK 489
G K Y +L + G + + E EK C+PN +YG +++ L ++
Sbjct: 343 RGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDE 402
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
AE+I M S + N + + ++ + GD KA
Sbjct: 403 AEDILQEMLSKGFLP-NAFTYSSLMKGFFKKGDSQKA 438
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 147/380 (38%), Gaps = 33/380 (8%)
Query: 169 WMMQQHWYRF---DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
W+++Q R D T + + + K + + + D +I +G P+ +T+ L+ +
Sbjct: 100 WLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGF 159
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHN 285
G LD A + +M + G Y+P +N++ L S L A +F
Sbjct: 160 CRV---GDLDGAVELVRKMTERG-YRPNAITYNNIMHGLCSG------RKLDSALQLFKE 209
Query: 286 LLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKE 345
+ SG D+++ + S + + L + M G S+L K
Sbjct: 210 MEESG-SCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKA 268
Query: 346 GDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
G +++A R+ S + ++ + K+G ++ + EM + +V Y
Sbjct: 269 GKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 328
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE 465
+++ CK + E L++ VE G P + +Y +L +M+ +R S ++
Sbjct: 329 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQ 388
Query: 466 K-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFV 524
K C PN Y + L A + + + M S+ + D V
Sbjct: 389 KGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCV-----------------PDIV 431
Query: 525 KAEKIYDLMCLKKYEIESAW 544
I D MC K Y ++ A+
Sbjct: 432 TFNTIIDAMC-KTYRVDIAY 450
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 141/353 (39%), Gaps = 29/353 (8%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
+ K K + + + G P+ +T++ +I + G +DEA + M+ GG
Sbjct: 265 LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKL---GRIDEAYHLLEEMVD-GG 320
Query: 250 YQPRPSLHNSLFRALVSKPG------GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
QP + L A K G GL + +++ NL T Y+ L+
Sbjct: 321 CQPNVVTYTVLLDAFC-KCGKAEDAIGLVEVMVEKG--YVPNLFT---------YNSLLD 368
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ +D + ER L M Q G +V+ K V + ++L S+N
Sbjct: 369 MFCKKDEV--ERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML-SNN 425
Query: 364 GIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+P F ++A K + E+F +QE + ++ Y+ ++ LCK+ + E
Sbjct: 426 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE 485
Query: 423 SLMKEFV-ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLES 480
L++E + G P + +Y + + DR + F + L + P+ Y I + S
Sbjct: 486 YLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISS 545
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
L +++A + M + + ++ + +G+ KA +I L+
Sbjct: 546 LCKWRFMDEANNVLELMLKNG-FDPGAITYGTLIDGFCKTGNLDKALEILQLL 597
>gi|302810470|ref|XP_002986926.1| hypothetical protein SELMODRAFT_125134 [Selaginella moellendorffii]
gi|300145331|gb|EFJ12008.1| hypothetical protein SELMODRAFT_125134 [Selaginella moellendorffii]
Length = 458
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 163/403 (40%), Gaps = 34/403 (8%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E +V+E + Q WY+ ++ + +GK ++ + +F ++ G PS F
Sbjct: 38 EAALKVFELLRSQQWYQPYAGTYIRMLEMLGKCKRPDEAASLFQTMLADGCGPSREAFTA 97
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ AY + + + A + M P ++ L ++ G LS+ A
Sbjct: 98 LMSAYTRSNL---MSTAMEVLQAMNATPHCSPDVFTYSLLIKSCCDC-GQLSR-----AA 148
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS--- 337
+ ++ G++ + Y+ I L +Y +++ L +M Q+ + S
Sbjct: 149 DLLADMTARGIQPNRVTYN--IILDAYAKCGSLDKLHDLALQMLQSPSPSCRPDHWSRNA 206
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
+++ GD+ E+ + RL +G + M AYAK F K + R +
Sbjct: 207 IVKGFGNRGDIRRMEEWFQRLTTPSDGPDSLTLHSLMAAYAKAEMFDKMHAVVRYIHRYH 266
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVET---GMKPLMPSYINLTNMYLNLGMHD 454
Y+ +I +A ++K F G++P +Y L N Y GM
Sbjct: 267 YQVDAVTYNILINAYGRAGR---KTQMLKTFTSMKCGGVRPDSVTYCTLINFYGKFGMQR 323
Query: 455 RLHLAFSE-CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
+L + + K +P+ +Y L++ + A +I + F M +Q + + NI+
Sbjct: 324 KLPRLLEQMSMHKVQPDTALYNSVLDAYRRASDISSIDRYFAAMQ-EQGCKPDHLTYNIL 382
Query: 514 LSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNR 556
+ AY S G KA D+M +++ EKL S+NR
Sbjct: 383 IQAYRSQGLTDKA----DVMAVEQ--------EKLKQRDSINR 413
>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 845
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 128/314 (40%), Gaps = 45/314 (14%)
Query: 160 NETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFH 219
N GF + W+ +Q ++ D T + +G+ ++F + D+++ G P+ +T++
Sbjct: 331 NALGF--FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYN 388
Query: 220 ILIVAYLSAPV-------------QGC-------------------LDEACSIYNRMIQL 247
LI +Y A GC LD A +Y RM Q
Sbjct: 389 RLIHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QA 447
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
G P ++ + L K G +L A +F ++ G ++ +I LH+
Sbjct: 448 AGLSPDTFTYSVIINCL-GKAG-----HLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAK 501
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
N E L ++MQ AGF+ K V+ V G +E+AE + ++ N +P
Sbjct: 502 ARNY--ETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAE-MQRKNWVPD 558
Query: 368 -PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
P + ++ + K G K+ + ++EM +VP + ++ + +L++
Sbjct: 559 EPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQ 618
Query: 427 EFVETGMKPLMPSY 440
+ G+ P + +Y
Sbjct: 619 SMLALGLHPSLQTY 632
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 111/238 (46%), Gaps = 12/238 (5%)
Query: 286 LLTSGLEIQKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
++ G + Y+ LI HSY + N E +++ K +MQ+AG E + +++ + AK
Sbjct: 375 MVKDGCKPNTVTYNRLI--HSYGRANYLNEAMNVFK-QMQEAGCEPDRVTYCTLIDIHAK 431
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASV 402
G ++ A + R+ + G+ F Y + K G + +F EM + + ++
Sbjct: 432 AGFLDIAMDMYQRMQAA--GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNL 489
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
++ +I L KA E L ++ G +P +Y + + + G + F+E
Sbjct: 490 VTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAE 549
Query: 463 CLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHM-HSDQTIGVNTRSCNIILSAYL 518
K P+ +YG+ ++ AGN+EKA + + M H+ + N +CN +LS +L
Sbjct: 550 MQRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAG--LRPNVPTCNSLLSTFL 605
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 131/297 (44%), Gaps = 13/297 (4%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ G VP T++ LI AY G D+A ++Y RM+ G P S +N++
Sbjct: 301 VFKEMKRVGFVPERDTYNTLISAYSRC---GSFDQAMAMYKRMLDTG-ITPDLSTYNAVL 356
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
AL GGL +Q+E I + + + + L LH+Y + + R+ L +
Sbjct: 357 AALAR--GGL----WEQSEKILAEMQDGMCKPNELTHCSL--LHAYANGKEIGRMLALAE 408
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
E+ E +L +++ V +K + +AE+ +L L + Y +
Sbjct: 409 EICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQ 468
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
K+ EI M+E + S+ Y+ ++ + ++E E +E ++KE + G+KP + SY
Sbjct: 469 MVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYN 528
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ Y G FSE E P+ Y ++ S E+A ++ +M
Sbjct: 529 TVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYM 585
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 127/304 (41%), Gaps = 17/304 (5%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
K +F+ + N G +P E T++ LI + +EA +++ M + G+ P +
Sbjct: 87 KITGLFEGMKNAGILPDEYTYNTLITCCRRGSL---YEEAAAVFEDMKSM-GFVPDKVTY 142
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
N+L G S+ +++A + + +G Y+ LI ++ +D + +E +
Sbjct: 143 NTLLDVY-----GKSR-RIKEAIEVLREMEVNGCSPSIVTYNSLISAYA-RDGLLEEAME 195
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW--LRLLESDNGIPTPAFVYKME 375
LK +M + G + ++L + G E A + + +R I T + KM
Sbjct: 196 -LKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKM- 253
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ G+F + +++F E++ + ++ ++ + + + KE G P
Sbjct: 254 -HGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVP 312
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+Y L + Y G D+ + L+ P+ + Y L +L G E++E+I
Sbjct: 313 ERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKIL 372
Query: 495 NHMH 498
M
Sbjct: 373 AEMQ 376
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 113/269 (42%), Gaps = 11/269 (4%)
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G + A S+ N + G++P + SL A VS +Y ++A +F + G
Sbjct: 11 EGKVSVAASLLNNL-HKDGFEPDVYAYTSLITACVSN----GRY--REAVMVFKKMEEEG 63
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ Y+ ++ ++ + + +I+ L + M+ AG E + L C + G + +
Sbjct: 64 CKPTLITYNVILNVYG-KMGMPWNKITGLFEGMKNAGILP-DEYTYNTLITCCRRGSLYE 121
Query: 351 AEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
++S +P + ++ Y K +++E+ REM+ S S+ Y+ +I
Sbjct: 122 EAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLI 181
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCR 468
+ E L + VE G+K + +Y + + ++ G + F E C+
Sbjct: 182 SAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCK 241
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
PN + ++ N G + ++F +
Sbjct: 242 PNICTFNALIKMHGNRGKFAEMMKVFEEI 270
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 143/329 (43%), Gaps = 23/329 (6%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D ++ +G P+ T+ +L+ G +DEA + N++ P P++ LF
Sbjct: 309 LVDRMLLRGFTPNSFTYGVLMHGLCR---MGKVDEARMLLNKV-------PNPNV--VLF 356
Query: 262 RALVSKPGGLSKYYLQQAEFIFH-NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
L++ G +S+ L +A+ + H ++L+ G Y+ LI + + R L
Sbjct: 357 NTLIN--GYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR--ELM 412
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
EMQ G E ++ KEG +E+A + S G+ A Y + A
Sbjct: 413 NEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM--SGKGLALNAVGYNCLISALC 470
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
K + +L +F +M + + ++ +I LCK + E L ++ + G+
Sbjct: 471 KDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 530
Query: 439 SYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+Y L + +L G M + L L C + Y +++L AGNIEK +F M
Sbjct: 531 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 590
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
S + + N SCNI+++ +G+ A
Sbjct: 591 MS-KGLNPNNISCNILINGLCRTGNIQHA 618
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 123/310 (39%), Gaps = 21/310 (6%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE----ACS 239
T L D KE + + R++ D++ +G + + ++ LI A C DE A +
Sbjct: 428 TILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL-------CKDEKVQDALN 480
Query: 240 IYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYS 299
++ M G +P NSL L ++K+ ++A ++ ++L G+ Y+
Sbjct: 481 MFGDMSS-KGCKPDIFTFNSLIFGLCK----VNKF--EEALGLYQDMLLEGVIANTITYN 533
Query: 300 GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
LI H++ + L +M G +++ + G++E + ++
Sbjct: 534 TLI--HAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM 591
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
+ + + G +LE R+M R + + Y+ +I LCK +
Sbjct: 592 SKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQ 651
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYL 478
+L + G+ P +Y L + + GM D HL S ++ PN + I +
Sbjct: 652 EALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILV 711
Query: 479 ESLKNAGNIE 488
+ G+ E
Sbjct: 712 SNFIKEGDQE 721
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 140/352 (39%), Gaps = 30/352 (8%)
Query: 206 IINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV 265
++N+ P+ + F+ LI Y+S +G LDEA ++ + + G P +N+L L
Sbjct: 344 LLNKVPNPNVVLFNTLINGYVS---RGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLC 400
Query: 266 SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
K YL A + + + G E Y+ LI + +++ R L EM
Sbjct: 401 KKG------YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL--DEMSG 452
Query: 326 AGFE---EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKI 380
G G L+S L K+ V+DA + + S G F + + K+
Sbjct: 453 KGLALNAVGYNCLISAL---CKDEKVQDALNMFGDM--SSKGCKPDIFTFNSLIFGLCKV 507
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
+F ++L ++++M A+ Y+ +I + + L+ + + G +Y
Sbjct: 508 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 567
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM-H 498
L G ++ F + + K PN I + L GNI+ A E M H
Sbjct: 568 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 627
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDY 550
T + T N +++ +G +A ++D K ++E + + Y
Sbjct: 628 RGLTPDIVTY--NSLINGLCKTGRAQEALNLFD-----KLQVEGICPDAITY 672
>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Brachypodium distachyon]
Length = 534
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 151/381 (39%), Gaps = 22/381 (5%)
Query: 182 LATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIY 241
L + D + K F R + D++ + S LI Y+ A G EA ++
Sbjct: 136 LYASMMDLLAKHHHFPLARHLLDEMRKRSIPISSQVILALIRRYVRA---GMSSEASDLF 192
Query: 242 NRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
M + GG P P++ SL G LSK L + S +Y+ L
Sbjct: 193 RSMEEYGGGVPDPAVLASLL-------GALSKKRLASEAQALFDSYKSVFTPDVVLYTTL 245
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
+ +DK EMQQAG +V+ + G V A++ ++++S
Sbjct: 246 VHAWCRSGCLDKAEQVF--AEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDS 303
Query: 362 DNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
T F M A+ K G + L++ +M++ + Y+ ++E C ++ L
Sbjct: 304 GCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLD 363
Query: 422 ES--LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYL 478
+ L+ + + G P ++ + + + LG D H + E +C+PN Y + +
Sbjct: 364 AAMKLLLKMIAKGCTPDCHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKPNVITYNLLM 423
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKY 538
+ +++ I M + Q + N + ++ + G++ +A M
Sbjct: 424 KLFGKDKSMDMVLRIKKDMDA-QGVEPNVNTYGALIETFCGRGNWKRAYATLREM----L 478
Query: 539 EIESAWMEK--LDYVLSLNRK 557
E++S +K D VL L RK
Sbjct: 479 EVKSLKPKKPVYDMVLVLLRK 499
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 163/376 (43%), Gaps = 22/376 (5%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
++V E M+++ F T L + + + K R++F ++ G P+ +T+ LI
Sbjct: 107 AYKVLEKMVEESIVPNVFTY-TILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLI 165
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY-LQQAEF 281
+LS G +DEA + MI+ Q L + + GGL K L A
Sbjct: 166 -QHLSRA--GEIDEALRV---MIE----QRSLELPTDVI-TCTTIVGGLCKASRLDDALK 214
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER-ISLLKKEMQQAGFEEGKEVLLSVLR 340
+ G+ + YS L+ H ++ + + +R I ++E + G L
Sbjct: 215 FMEEMRQMGVRPNEVTYSNLV--HGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLD 272
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLG 398
K G ++ A K+ L +S G+ Y M +A+ G+F SLE+ +M+
Sbjct: 273 ALCKAGYLDRARKSVEELRQS--GVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGV 330
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
V Y +I +LCK + + L++ G P + +Y ++ + G D +H
Sbjct: 331 KPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHR 390
Query: 459 AFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
+ L+ +C P+ Y I + L AG ++ A ++F + S + G + + ++++++
Sbjct: 391 VYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSRE-GPDAAAYSMVITSL 449
Query: 518 LSSGDFVKAEKIYDLM 533
+G +A +Y M
Sbjct: 450 CRAGKLEEACGMYHGM 465
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 174/452 (38%), Gaps = 91/452 (20%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKER---------------------------- 194
F VYEW+ +HWY + + + + +GK
Sbjct: 205 AFEVYEWLNLRHWYSPNARMLSTILAVLGKANQEPLAVEVFTRAEPSVENTVKVYNAMMG 264
Query: 195 ------KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSI-YNRMIQL 247
KF K +++FD + +G P ++F+ LI A L A G + +I ++
Sbjct: 265 VYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKA---GEMTPNLAIELLTEVRR 321
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
G +P +N+L A L++A +F +++ E Y+ +I ++
Sbjct: 322 SGLRPDIITYNTLISACSRASN------LEEAVNVFDDMVAHHCEPDLWTYNAMISVYGR 375
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
K L +++ GF S L A+EG+VE + +++ G
Sbjct: 376 CGLSGKAE--QLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDE 433
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
+ + Y K G+ +L+++R+M+ + V Y +I+ L K + E +M E
Sbjct: 434 MTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSE 493
Query: 428 FVETGMKPLMPSYINLTNMYLNLG--------------------------MHDRLHLAFS 461
+ TG+KP + +Y L Y G M D +HL F+
Sbjct: 494 MLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLD-IHLRFN 552
Query: 462 E-----------CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC 510
E + P ++Y + L +L NA +E + M ++ G+N ++
Sbjct: 553 EPKRAMTFYKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVRDM--EEVCGMNPQAI 610
Query: 511 NIILSAYLSSGD-FVKAEKIYDLMCLKKYEIE 541
+ I L GD + +A K+ +YEI+
Sbjct: 611 SYI----LVKGDCYDEAAKMLRRAISDRYEID 638
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYLS--APVQGC--LDEACSIYNRMIQLGGYQ 251
F K I+ I G P E T++ILIV Y P +G +DE ++ G +
Sbjct: 971 FRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTV--------GLE 1022
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P+ +++LV+ G + ++QAE +F L ++G ++ + Y I + Y+++
Sbjct: 1023 PKLDT----YKSLVASFG--KQQLVEQAEELFEELQSTGCKLDRSFYH--IMMKIYRNSG 1074
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
+ L M+ G E + ++ G ++AEK L E+D + T +
Sbjct: 1075 SHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLSTLPYS 1134
Query: 372 YKMEAYAKIGEFMKSLEIFREMQE 395
++AY + G++ ++ ++++E
Sbjct: 1135 SVIDAYVRNGDYNAGIQKLKQVKE 1158
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/293 (18%), Positives = 123/293 (41%), Gaps = 39/293 (13%)
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
Q+AE + N+ S + + + +++ LI +Y + ER + M + G + +
Sbjct: 797 QKAESVAGNMRQSCITVNRKVWNALI--EAYAASGCYERARAVFNTMMKDGPSPTVDSIN 854
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
+L+ +G +E+ L + I + + ++A+A+ G + +I+ M+
Sbjct: 855 GLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAA 914
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
S+ Y + +LLC+ ++ E+++ E E G KP + + ++ MY+ + +
Sbjct: 915 GYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKT 974
Query: 457 HLAFSECLEK----------------CRPNRTIYGIYL-ESLKNAGN------------- 486
+ E CR +R G+ L + ++ G
Sbjct: 975 TQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVAS 1034
Query: 487 ------IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+E+AEE+F + S ++ +I++ Y +SG KA++++ +M
Sbjct: 1035 FGKQQLVEQAEELFEELQS-TGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMM 1086
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 135/340 (39%), Gaps = 43/340 (12%)
Query: 217 TFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH--NSLFRALVSKPGGLSKY 274
++ LI AY ++ GC + A +++N M++ G P P++ N L +AL+ G L +
Sbjct: 817 VWNALIEAYAAS---GCYERARAVFNTMMKDG---PSPTVDSINGLLQALIVD-GRLEEL 869
Query: 275 Y-----LQQAEF-------------------------IFHNLLTSGLEIQKDIYSGLIWL 304
Y LQ F I+H + +G +Y + L
Sbjct: 870 YVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQL 929
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
+ + + EM++AGF+ + SVL++ D + + R+ E
Sbjct: 930 LCRGKQV--RDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLE 987
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
+ + Y + + L + EM+ + Y ++ K + E E L
Sbjct: 988 PDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEEL 1047
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKN 483
+E TG K Y + +Y N G H + FS E P + + S +
Sbjct: 1048 FEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGS 1107
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
+G ++AE++ +++ + ++T + ++ AY+ +GD+
Sbjct: 1108 SGQPQEAEKVLSNL-KETDANLSTLPYSSVIDAYVRNGDY 1146
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 150/356 (42%), Gaps = 32/356 (8%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
K K R+ + + VP + + LI A + +EA NRM + P
Sbjct: 282 KVGKWREALTLVETENFVPDTVFYTKLISGLCEASL---FEEAMDFLNRM-RATSCLPNV 337
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
+++L G L+K L + + + + ++ G I++ L+ H+Y + D
Sbjct: 338 VTYSTLL------CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV--HAYCTSGDHS 389
Query: 315 RISLLKKEMQQAGFEEGKEVL-LSVLRVCAKEG----DVED-AEKTWLRLLESD---NGI 365
L K+M + G G V + + +C + D+ D AEK + +L + N I
Sbjct: 390 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTE 422
+F G++ K+ + REM +G +P Y K++ LC A + EL
Sbjct: 450 NVSSFT---RCLCSAGKYEKAFSVIREM---IGQGFIPDTSTYSKVLNYLCNASKMELAF 503
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESL 481
L +E G+ + +Y + + + G+ ++ F+E E C PN Y + +
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
A + A E+F M S+ + N + + ++ + +G KA +I++ MC K
Sbjct: 564 LKAKKVSYANELFETMLSEGCLP-NIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 67/338 (19%), Positives = 131/338 (38%), Gaps = 33/338 (9%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E F V M+ Q + D + +K+ +Y+ K +F+++ G V T+ I
Sbjct: 465 EKAFSVIREMIGQGFIP-DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
++ ++ A G +++A +N M ++G P + +L A L + A
Sbjct: 524 MVDSFCKA---GLIEQARKWFNEMREVGC-TPNVVTYTALIHAY------LKAKKVSYAN 573
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+F +L+ G YS LI H ++K FE R
Sbjct: 574 ELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK----------ACQIFE----------R 613
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
+C + DV D + + + ++ + ++ + K ++ ++ M
Sbjct: 614 MCGSK-DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
+ Y +I+ LCK + + + + E E G + +Y +L + Y + D
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732
Query: 461 SECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
S+ LE C PN IY ++ L G ++A ++ M
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 66/355 (18%), Positives = 140/355 (39%), Gaps = 54/355 (15%)
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
+++ +C+ + + ++ +G PS F+ L+ AY ++ G A + +M++ G + P
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTS---GDHSYAYKLLKKMVKCG-HMP 405
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD---------------- 296
++N L ++ L+ L AE + +L +G+ + K
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 465
Query: 297 ---------IYSGLI-------WLHSYQDNIDKERIS-LLKKEMQQAGFEEGKEVLLSVL 339
I G I + +Y N K ++ LL +EM++ G ++
Sbjct: 466 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 525
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
K G +E A K + + E + + AY K + + E+F M
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 585
Query: 400 ASVPAYHKIIELLCKAEETEL----------------TESLMKEFVETGMKPLMPSYINL 443
++ Y +I+ CKA + E + K++ + +P + +Y L
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645
Query: 444 TNMYL-NLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ + + + + L + +E C PN+ +Y ++ L G +++A+E+ M
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 117/279 (41%), Gaps = 22/279 (7%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI------ 245
K +K + ++F+ ++++G +P+ +T+ LI + A G +++AC I+ RM
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA---GQVEKACQIFERMCGSKDVP 621
Query: 246 -------QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
Q RP++ + AL+ G + +++A + + G E + +Y
Sbjct: 622 DVDMYFKQYDDNSERPNVVT--YGALLD--GFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
LI +D+ + +K EM + GF S++ K + A K ++
Sbjct: 678 DALIDGLCKVGKLDEAQ--EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
LE+ + ++ K+G+ ++ ++ + M+E+ +V Y +I+ +
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
E L++ G+ P +Y L + G D H
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 834
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 158/407 (38%), Gaps = 78/407 (19%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP-VQG---CL 234
D+AL L Y GK R F+ + G S ++ LI AY+ A +QG C+
Sbjct: 125 DYAL---LIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCV 181
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQ 294
+E +++ G P + + F A++S G S ++ AE F ++
Sbjct: 182 EE--------MEIEGIFP----NAATFSAIISGYG--SSGNVEAAEKWFQRSVSENWNHN 227
Query: 295 KDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEG---KEVLLSVLRVCAKEGDVEDA 351
IYS +I H+Y + ER L +M++ G E +L+ C E +
Sbjct: 228 VAIYSSII--HAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNV 285
Query: 352 -EKTWLRLLESDNGIPTPAFVYK------------------------------------- 373
K R+ D G+ A Y
Sbjct: 286 FHKLKARI---DTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSML 342
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
++ Y ++G+F + +F +M E Y+ +++ CK+ + L+ G
Sbjct: 343 VDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGC 402
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
P + +YI + + ++ G + SE L CRPN T Y + + +L G I++A
Sbjct: 403 SPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAAS 462
Query: 493 IFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
+ + M + GV N RS ++ + S G+ A K CLK+
Sbjct: 463 VIDEM---ELAGVQPNFRSYTTLMQGFASIGEIGLAFK-----CLKR 501
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 127/313 (40%), Gaps = 21/313 (6%)
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS 255
FA +F+D+ G P +T++IL+ A+ + + A + RM + G P
Sbjct: 352 FANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQ---MTRAIQLLGRM-KTRGCSPTIQ 407
Query: 256 LHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER 315
+ ++ + K G + Y +E + +G Y+ + +H+ +R
Sbjct: 408 TYITIIDGFM-KTGDVRMAYKTVSE-----MKLAGCRPNATTYN--VIMHNLVQLGQIDR 459
Query: 316 ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME 375
+ + EM+ AG + ++++ A G++ A K R+ E P ++ ++
Sbjct: 460 AASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLK 519
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCK--AEETELTES--LMKEFVET 431
A K G ++ + EM A VP + I L A+ ++ E+ +M++ +
Sbjct: 520 ACCKAGRMQNAIAVTEEM----AFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQE 575
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKA 490
G P + SY + N G + E ++ +PN Y I + + + EKA
Sbjct: 576 GFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKA 635
Query: 491 EEIFNHMHSDQTI 503
++ M + I
Sbjct: 636 LICYDEMKAAGLI 648
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/407 (19%), Positives = 170/407 (41%), Gaps = 37/407 (9%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
C R E +V+E +++ + A + D + K +F + +++ ++
Sbjct: 238 CFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQA 297
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL--VSKPGGL 271
+T+ ILI + G +D A +Y+ M++ G S++NSL + V + G
Sbjct: 298 DTVTYGILIHGLCRS---GDVDSAARVYSDMVK-AGLVLDVSVYNSLIKGFCEVGRTGEA 353
Query: 272 SKYYLQQA-----EFIFHNLLTSGL--------------------EIQKDIYSGLIWLHS 306
K++ + +N++T GL D + +H
Sbjct: 354 WKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHG 413
Query: 307 YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
+N R + ++ + +G E S++ K+G DA + + +++ +G
Sbjct: 414 LCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVK--DGCK 471
Query: 367 TPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
+ VY + + ++ + +++I+ EM ++ Y+ +I+ LCKAE+ + SL
Sbjct: 472 PNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSL 531
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKN 483
KE +E G KP + +Y +L D + E L+ + + ++ I + L +
Sbjct: 532 TKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCS 591
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
AG +++A I+ M ++ N + N ++ + G KA ++
Sbjct: 592 AGKVDEAFCIYLEM-KEKNCSPNLVTYNTLMDGFYEIGSIDKAASLW 637
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 102/244 (41%), Gaps = 20/244 (8%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
+I +D N G ++ +I + G +A +Y M++ G +P ++N+L
Sbjct: 425 EILEDARNSGEELDVFSYSSMINRFCK---DGRTHDANEVYKNMVK-DGCKPNSHVYNAL 480
Query: 261 FRAL--VSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
VSK K Y++ N + + GL YQ+ S
Sbjct: 481 INGFCRVSKINDAIKIYIEMTS----NGCCPTIITYNTLIDGLCKAEKYQE------ASS 530
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEA 376
L KEM + GF+ S++R ++ V+ A + W +L D G+ V+ +
Sbjct: 531 LTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEIL--DAGLQVDVMVHNILIHG 588
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
G+ ++ I+ EM+E+ S ++ Y+ +++ + + SL ++ G+KP
Sbjct: 589 LCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPD 648
Query: 437 MPSY 440
+ +Y
Sbjct: 649 IVTY 652
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 50/261 (19%), Positives = 104/261 (39%), Gaps = 14/261 (5%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K+ + +++ +++ G P+ ++ LI + +++A IY M G
Sbjct: 451 KDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSK---INDAIKIYIEMTS-NGCC 506
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P +N+L L KY Q+A + +L G + Y+ LI +
Sbjct: 507 PTIITYNTLIDGLCKA----EKY--QEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKV 560
Query: 312 DKERISL-LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
D ++L + E+ AG + V ++ G V++A +L + E + +
Sbjct: 561 D---VALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTY 617
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
M+ + +IG K+ ++ + + + Y+ I+ LC T L+ E +
Sbjct: 618 NTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLA 677
Query: 431 TGMKPLMPSYINLTNMYLNLG 451
TG+ P + ++ L + G
Sbjct: 678 TGIMPTVITWSILVRAVIKYG 698
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 138/342 (40%), Gaps = 51/342 (14%)
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
QG DEA + ++M + G P +N++ G + + A +F N+L G
Sbjct: 456 QGKTDEATELLSKM-ESRGIGPNVVSYNNVML------GHCRQKNMDLARIVFSNILEKG 508
Query: 291 LEIQKDIYSGLI---------------WLHSYQDNIDKERI---SLLKKEMQQAGFEEGK 332
L+ YS LI H NI+ + +++ + + +
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 333 EVLLSVL---RVCA-------------KEGDVEDAEKTWLRLLESDNGIPTPAFVYK--M 374
E+L +++ R+C KEG+++ A + + NGI Y M
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM--CGNGISPNVITYTSLM 626
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
K ++LE+ EM+ + +PAY +I+ CK E +L E +E G+
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 435 PLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEI 493
P P Y +L + + NLG M L L + R + Y ++ L GN+ A E+
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 494 FNHMHSDQTIGVNTRSC--NIILSAYLSSGDFVKAEKIYDLM 533
+ M Q +G+ +I++ G FVK K+++ M
Sbjct: 747 YTEM---QAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 162/430 (37%), Gaps = 94/430 (21%)
Query: 178 FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQ-GCLDE 236
F F + ++ +Y+ + D DI+NQ + F + LSA VQ L E
Sbjct: 157 FGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTE 216
Query: 237 ACSIYNRMIQLG--GYQPRPSLHNSLFRALV--SKPGGLSKYYLQQAEFIFHNLLTSGLE 292
A +Y+RM+ +G G L L RA + KP +A + + G E
Sbjct: 217 AKELYSRMVAIGVDGDNVTTQL---LMRASLREEKPA--------EALEVLSRAIERGAE 265
Query: 293 IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF-EEGKEVLLSVLRVCAKEGDVEDA 351
+YS + + + +D + L +EM++ +E SV+ K+G+++DA
Sbjct: 266 PDSLLYS--LAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDA 323
Query: 352 EKTWLRLLESDNGI----------------------------------PTP---AFVYKM 374
+ +L +GI P+P F +
Sbjct: 324 IRLKDEMLS--DGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Query: 375 EAYAKIGEFMKSLEIFREM-------------------------QERL---------GSA 400
E + K GE K+LE +++M +E L G A
Sbjct: 382 EWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA 441
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
+V + I+ LCK +T+ L+ + G+ P + SY N+ + D + F
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 461 SECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
S LEK +PN Y I ++ + + A E+ NHM S I VN I++
Sbjct: 502 SNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTS-SNIEVNGVVYQTIINGLCK 560
Query: 520 SGDFVKAEKI 529
G KA ++
Sbjct: 561 VGQTSKAREL 570
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 154/356 (43%), Gaps = 37/356 (10%)
Query: 199 CRDIFDDIINQGRVPSEMTFHIL---------IVAYLSAPVQGC----LDEACSIYNRMI 245
C IF + QG+V + +F + +V Y + + C +D A SI++ M+
Sbjct: 452 CNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEML 511
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ G QP +N + L+ G Q A + + ++ S E + IY+ +I
Sbjct: 512 E-KGLQP----NNFTYSILID--GFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGL 564
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
K + +L+ +++ + G S++ KEGD + A + + + S+NGI
Sbjct: 565 CKVGQTSKAK-EMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREM--SENGI 621
Query: 366 P--TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
F + + K +LE+ EM+ + VPAY +I+ CK + + +
Sbjct: 622 SPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYT 681
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLK 482
L E +E G+ P + Y NL + + NLG M + L + + Y ++ L
Sbjct: 682 LFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLL 741
Query: 483 NAGNIEKAEEIFNHMHS-----DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
GN+ A ++++ + + D+ + V ++++ G FV+A K+ + M
Sbjct: 742 KDGNLILASDLYSELLALGIVPDEILYV------VLVNGLSKKGQFVRASKMLEEM 791
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 21/266 (7%)
Query: 177 RFDFALATKLADYM----GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQG 232
RFDF L+++ +Y+ + R+ D F+ ++++ VP F + LS+ V+
Sbjct: 162 RFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVP----FVPYVNNVLSSLVRS 217
Query: 233 CL-DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGL 291
L DEA IYN+M+ +G + L RA L + ++A IF +++ G
Sbjct: 218 NLIDEAKEIYNKMVLIGVAGDNVTTQ-LLMRA------SLRERKPEEAMKIFRRVMSRGA 270
Query: 292 EIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
E ++S + ++ + LL++ ++ G +E SV+ C KEG++E+A
Sbjct: 271 EPDGLLFSLAVQAACKMKDLVMA-LDLLREMREKGGVPASQETYTSVIVACVKEGNMEEA 329
Query: 352 EKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
K ++ GIP + + E K+L+ F M+E + + +I
Sbjct: 330 VKVKDEMVGF--GIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMI 387
Query: 410 ELLCKAEETELTESLMKEFVETGMKP 435
E CK E E + K G+ P
Sbjct: 388 EWFCKNMEMEKAVEIYKRMKSVGIAP 413
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 138/352 (39%), Gaps = 48/352 (13%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L D K + + D++++QG VP+ +T+ +++ +G + EA ++ +
Sbjct: 344 TSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCK---EGKVAEADNVLSL 400
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M + GG + L+ +L G ++A + + + G+E+ +Y LIW
Sbjct: 401 M-ERGGVKANELLYTTLIH------GHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIW 453
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+D+ + SLL K M G + +++ K G +A ++L+S
Sbjct: 454 GLCKDQKVDEAK-SLLHK-MAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGF 511
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
+ ++ K G +++ F +M+E +V AY +I+ CK
Sbjct: 512 QPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMH 571
Query: 424 LMKEFVETGMK-------PLMPSYINLTNM----------------------------YL 448
LM E ++ GM L+ Y+ N+ +
Sbjct: 572 LMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFC 631
Query: 449 NLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
N+ M SE + P++T+Y + + GN+E+A + N M S
Sbjct: 632 NMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMES 683
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
K GD+E+ E+ + +S + + ++K G K+ F EM+ + A+V
Sbjct: 246 GKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANV 305
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP---SYINLTNMYLNLGMHDRLHLA 459
+ ++ CK L + MK F + ++ +MP +Y +L + G D +
Sbjct: 306 VTFSTFVDAFCK---EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVL 362
Query: 460 FSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
E + + PN Y + ++ L G + +A+ + + M GV N +L L
Sbjct: 363 LDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERG---GVKA---NELLYTTL 416
Query: 519 SSGDFV--KAEKIYDLM 533
G F+ +E+ DL+
Sbjct: 417 IHGHFMNNNSERALDLL 433
>gi|255553861|ref|XP_002517971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542953|gb|EEF44489.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1029
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 152/385 (39%), Gaps = 44/385 (11%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D GK + DIF D++ G +TF+ +I S G L EA ++ N+M
Sbjct: 348 LIDLYGKAGRLGDAADIFSDMMKSGVAMDTITFNTMIYTCGS---HGHLSEAETLLNKM- 403
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLS---KYYLQQAEF-----------IFHNLL---- 287
+ G P +N +F +L + G + K Y + E I H L
Sbjct: 404 EDRGVSPDTRTYN-IFLSLYADEGNIDAAIKCYKKIREVGLLPDTVSHRAILHELCERNM 462
Query: 288 ------------TSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
S ++ + GL+ ++ + D+ LL K G
Sbjct: 463 VKEAEAIIEEIEKSSKQVDEHSLPGLVKMYINKGLFDRAN-DLLNKCQFGGGLSAKTNA- 520
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM 393
+++ A+ G +AE + R + G T Y ++AY K + K+ +FR M
Sbjct: 521 -AIIDAYAENGLWAEAEAVFYRKRDL-VGQKTDILEYNVMIKAYGKGKLYEKAFTLFRSM 578
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
+ Y+ +I++ A+ + L+ E G KP ++ ++ Y LG
Sbjct: 579 RHHGTWPDECTYNSLIQMFSGADLMDQARDLLTEMQGVGFKPQCATFSSIIACYARLGQL 638
Query: 454 DRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI 512
+ E ++ +PN +YG + GN+++A + F HM + I N
Sbjct: 639 SDAAGVYQEMVKVGVKPNEVVYGAIINGYAEEGNVKEALKYF-HMMEEYGISANQIVLTS 697
Query: 513 ILSAYLSSGDFVKAEKIYD-LMCLK 536
++ Y G F A+++Y +MCL+
Sbjct: 698 LIKVYSKLGCFDSAKQLYQKMMCLE 722
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 126/305 (41%), Gaps = 19/305 (6%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSL-FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLE 292
DEA S +RM + + N + +R L+S G L K L + I + ++T G
Sbjct: 58 FDEAMSFLHRM------RCNSCIPNVVTYRTLLS--GFLKKKQLGWCKRIINMMMTEGCN 109
Query: 293 IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL-LSVLRVCAKEG----D 347
+++ L+ HSY + D L M G G V + + +C +E D
Sbjct: 110 PNPSLFNSLV--HSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 167
Query: 348 VED-AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
+ D AEK + +L ++ + +G+F K+ ++ +EM + Y
Sbjct: 168 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYS 227
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE- 465
K+I LC A + E L +E G+ P + +Y L + + G+ ++ F E
Sbjct: 228 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 287
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
C P Y + + A + +A +IF+ M D N + ++ +G+ K
Sbjct: 288 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRM-VDAGCRPNDVTYGALVDGLCKAGNISK 346
Query: 526 AEKIY 530
A ++Y
Sbjct: 347 AFEVY 351
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 20/283 (7%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG-- 249
K ++ + DIF +++ G P+++T+ L+ A G + +A +Y ++I
Sbjct: 305 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA---GNISKAFEVYAKLIGTSDSA 361
Query: 250 ----YQPRPSLHN-----SLFRALVSKPGGLSKYY-LQQAEFIFHNLLTSGLEIQKDIYS 299
Y P H + ALV GL K + + A + +L+SG E +Y
Sbjct: 362 DSDFYFPCEDRHTLAPNVVTYGALVD---GLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 418
Query: 300 GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
LI ID + L +M + G+ S++ K+G ++ A K ++L
Sbjct: 419 ALIDGFCKAGKIDSAQEVFL--QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 476
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
+ + ++ +IGE K+L++ M+E+ S +V Y +I+ L KA + +
Sbjct: 477 KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKID 536
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
L+ L + G P +Y L N G+ D+ L E
Sbjct: 537 LSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGE 579
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 139/332 (41%), Gaps = 31/332 (9%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L D K + + +F+++ + G P+ +T+ LI AYL A + +A I++R
Sbjct: 262 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ---VPQANDIFHR 318
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M+ G +P + +L L K G +SK + ++ L+ + D Y
Sbjct: 319 MVD-AGCRPNDVTYGALVDGLC-KAGNISKAFE-----VYAKLIGTSDSADSDFYFPCED 371
Query: 304 LHSYQDNI--------------DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
H+ N+ + L M +G E V +++ K G ++
Sbjct: 372 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 431
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
A++ +L++ + + ++ K G ++++ +M + + +V Y +I
Sbjct: 432 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 491
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECLEK 466
+ LC+ E+E L+ E G P + +Y L + LG ++ L+ F++ K
Sbjct: 492 DGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALID---GLGKAGKIDLSLDLFTQMSRK 548
Query: 467 -CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
C PN Y + + L AG ++KA + M
Sbjct: 549 GCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 580
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 127/350 (36%), Gaps = 33/350 (9%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA- 228
MM + +L L E+ +A + + + G P + ++I I +
Sbjct: 102 MMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQE 161
Query: 229 --PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNL 286
P LD A IY M+ + ++ N R L G+ K+ +A + +
Sbjct: 162 KLPSPDLLDLAEKIYGEMLAANCVLNKVNVAN-FARCLC----GVGKF--DKAFQLIKEM 214
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEG 346
+ G YS +I + + E+ LL +EM+ G ++ K G
Sbjct: 215 MRKGFVPDTSTYSKVITFLCHATKV--EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG 272
Query: 347 DVEDAEKTWL-RLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
+E A+ WL + S PT + + AY K + ++ +IF M + +
Sbjct: 273 LIEQAQ--WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVT 330
Query: 405 YHKIIELLCKAEETELTESLMKEFVETG----------------MKPLMPSYINLTNMYL 448
Y +++ LCKA + + + T + P + +Y L +
Sbjct: 331 YGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLC 390
Query: 449 NLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
D H L C PN +Y ++ AG I+ A+E+F M
Sbjct: 391 KAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 440
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 122/328 (37%), Gaps = 29/328 (8%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K+++ C+ I + ++ +G P+ F+ L+ +Y + A + NRM G
Sbjct: 89 KKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYA---YAYKLLNRMTTCG-CP 144
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P ++N ++ + S L AE I+ +L + + K +
Sbjct: 145 PGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 204
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN-GIPTPAF 370
DK L KEM + GF V+ VE K +L E G+ +
Sbjct: 205 DKAF--QLIKEMMRKGFVPDTSTYSKVITFLCHATKVE---KAFLLFQEMKMVGVTPDVY 259
Query: 371 VYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
Y + +++ K G ++ +F EM+ S +V Y +I KA++ +
Sbjct: 260 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 319
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-----------------EKCRPNR 471
V+ G +P +Y L + G + +++ + PN
Sbjct: 320 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 379
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHS 499
YG ++ L A ++ A E+ + M S
Sbjct: 380 VTYGALVDGLCKAHKVDHAHELLDAMLS 407
>gi|225455374|ref|XP_002272755.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Vitis vinifera]
Length = 672
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 135/334 (40%), Gaps = 51/334 (15%)
Query: 206 IINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV 265
I G + +T ++LI AYL D A Y ++I + P P+ + L + +V
Sbjct: 156 ITQAGVAANVVTHNLLINAYLDCRKT---DTALEHYKQLINDAPFNPSPTTYRILIKGIV 212
Query: 266 SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID---------KERI 316
+++A + +L G +YS L+ H N D KE++
Sbjct: 213 DNGK------VERALELKEEMLGKGFAADPVVYSYLMLGHVRNLNADGVFELYEELKEKL 266
Query: 317 ----------SLLK--------KEMQQAGFE---EGKEVLLS------VLRVCAKEGDVE 349
SL+K KE Q E EG ++ +S VL +K G +
Sbjct: 267 GDVDDGVVVGSLMKGYFLRGMEKEAMQCYAEAVGEGSKIRMSAVAFNSVLDALSKNGKFD 326
Query: 350 DAEKTWLRLLESDN-----GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
+A + R++ N + +F ++ + G F ++E+FR+M E+ SA +
Sbjct: 327 EAMLLFERMMAEYNPPRRLSMNLGSFNVMVDGFCTAGRFKDAIEVFRKMGEKRCSADTLS 386
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
Y+ +IE LC E L E G+ P +Y+ L + D F + +
Sbjct: 387 YNNLIEQLCNNGMLAEAEELYGEMANKGVNPDEFTYVLLMDTCFKENRTDDGAGYFRKMV 446
Query: 465 EK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
E RPN +Y ++ L G I++A+ ++ M
Sbjct: 447 ETGLRPNLAVYSKLVDGLVKVGKIDEAKSFYDLM 480
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 185/428 (43%), Gaps = 48/428 (11%)
Query: 178 FDFALAT----KLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGC 233
++FAL + + +YMG+ ++ ++ G +P +T++ +I +Y +G
Sbjct: 151 YNFALRSLARFDMTEYMGR---------VYSQLVQDGLLPDTVTYNTMIKSYCK---EGD 198
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
L A + R++ GG +P N+L G L++A ++F L+ +
Sbjct: 199 LTTAHRCF-RLLLEGGLEPETFTCNALVL------GYCRTGELRKACWLF--LMMPLMGC 249
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
Q++ YS I + + +L M++ G ++ K G V DA
Sbjct: 250 QRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA-- 307
Query: 354 TWLRLL---ESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVP-AYHK 407
RLL NG+ Y + Y+K+G +L+I +E+ E+ G Y+
Sbjct: 308 ---RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNGCHPDDWTYNT 363
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY-LNLGMHDRLHLAFSECLEK 466
+I LC ++TE E L+ V+ G P + ++ NL N Y + D L + K
Sbjct: 364 LIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSK 422
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
C+ + ++G + SL +++A+E+ N + ++ + N + I+ Y SG A
Sbjct: 423 CKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVP-NVITYTSIIDGYCKSGKVDIA 481
Query: 527 EKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLI------GLLL 580
++ +M + + L Y L + K++ K ++L L+ Q++ +I LL
Sbjct: 482 LEVLKMMERDGCQPNAWTYNSLMYGL-VKDKKLHKAMAL-LTKMQKDGIIPNVITYTTLL 539
Query: 581 GGLCIESD 588
G C E D
Sbjct: 540 QGQCDEHD 547
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 142/348 (40%), Gaps = 22/348 (6%)
Query: 153 HCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRV 212
+CM + ++ R+ MM + D + KL + + K+ + + +++ ++I G V
Sbjct: 402 YCMAEKFDD-ALRMKNKMMSSKC-KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLV 459
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ +T+ +I Y + G +D A + +M++ G QP +NSL LV
Sbjct: 460 PNVITYTSIIDGYCKS---GKVDIALEVL-KMMERDGCQPNAWTYNSLMYGLVKDKK--- 512
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
L +A + + G+ Y+ L L D D + L + M+Q G + +
Sbjct: 513 ---LHKAMALLTKMQKDGIIPNVITYTTL--LQGQCDEHDFDNAFRLFEMMEQNGLKPDE 567
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIF 390
+ K G E+A +R G+ Y ++ ++K G + +
Sbjct: 568 HAYAVLTDALCKAGRAEEAYSFIVR-----KGVALTKVYYTTLIDGFSKAGNTDFAATLI 622
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
M + + Y ++ LCK + ++ + G+K + +Y L + L
Sbjct: 623 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLRE 682
Query: 451 GMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
G HD ++E +P+ T Y +++ S G +E AE++ M
Sbjct: 683 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKM 730
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 138/325 (42%), Gaps = 20/325 (6%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
MM++ + T L + K + R +FD + G VPS MT++ +IV Y
Sbjct: 278 MMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKL- 336
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
G +++A I +++ G P +N+L GL ++AE + +N +
Sbjct: 337 --GRMNDALKI-KELMEKNGCHPDDWTYNTLIY-------GLCDQKTEEAEELLNNAVKE 386
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
G ++ LI + + D +K +M + + +V ++ K+ ++
Sbjct: 387 GFTPTVVTFTNLINGYCMAEKFDDAL--RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLK 444
Query: 350 DAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
+A++ + S NG+ Y ++ Y K G+ +LE+ + M+ + Y+
Sbjct: 445 EAKELLNEI--SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 502
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK- 466
++ L K ++ +L+ + + G+ P + +Y L + D F E +E+
Sbjct: 503 LMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF-EMMEQN 561
Query: 467 -CRPNRTIYGIYLESLKNAGNIEKA 490
+P+ Y + ++L AG E+A
Sbjct: 562 GLKPDEHAYAVLTDALCKAGRAEEA 586
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 145/377 (38%), Gaps = 24/377 (6%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M H + D + L DY+ K + + R+IFD +I +G P + IL+ Y
Sbjct: 263 MSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGY---AT 319
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G L E S + M++ G P + N +F A K + +A IF +
Sbjct: 320 EGALSEMHSFLDLMVR-NGVSPDHHIFNIMFNAYAKKA------MIDEAMHIFDKMRQQW 372
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
L Y LI +D + +M G V S++ E
Sbjct: 373 LSPGVVNYGALIDALCKLGRVDDAVLKF--NQMINEGVTPDIFVFSSLVYGLCTVDKWEK 430
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
AEK + +L+ + F M + G M++ + M V +Y+ +++
Sbjct: 431 AEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVD 490
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRP 469
C + L+ V G+KP +Y L + Y D + F E L K P
Sbjct: 491 GHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTP 550
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI----ILSAYLSSGDFV- 524
Y L L G +A+E++ +M + N R C+I I+ L +FV
Sbjct: 551 GVVTYNTILHGLFQIGRFCEAKELYLNMIN------NRRKCDIYTYTIILNGLCRNNFVD 604
Query: 525 KAEKIYDLMCLKKYEIE 541
+A K++ +C K +++
Sbjct: 605 EAFKMFQSLCSKDLQLD 621
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 64/333 (19%), Positives = 124/333 (37%), Gaps = 38/333 (11%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+FD+++ R S TF+ L+ A + S++NRMI+ + PS + +
Sbjct: 38 LFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPS--SCTY 95
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L+ + + L+ F +L +G + + G + E +L +
Sbjct: 96 TILIGCFCRMGR--LKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLR 153
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
M + G +L+ E E+A + + + +G TP
Sbjct: 154 RMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTP------------- 200
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+V Y +I+ LCKA+ + + + + ++ G++P +Y
Sbjct: 201 -------------------NVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYT 241
Query: 442 NLTNMYLNLGMHDRLHLAFSE-CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
L + YL+ G + E +P+ IY + L+ L G +A IF+ +
Sbjct: 242 CLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIR- 300
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ I + I+L Y + G + DLM
Sbjct: 301 KGIKPHVTIYGILLHGYATEGALSEMHSFLDLM 333
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 151/374 (40%), Gaps = 14/374 (3%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
+ FR + W +Q Y L D + F + R IF + +G + + +
Sbjct: 136 DIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANS 195
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
LI ++ + G ++E ++ RM + G +P N L LV + +++ AE
Sbjct: 196 LIRSFGAL---GMVEELLWVWRRMKE-SGIEPSLYTFNFLLNGLV------NSMFIESAE 245
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+F ++ G +I D+ S + Y + ++ +M++ E K L++++
Sbjct: 246 RVFE-VMECG-KIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQ 303
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
C EG+ + + + E IP A+ + K G ++ +F M ++ A
Sbjct: 304 ACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKA 363
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
+V Y +I+ K +L + G +P +Y + N G D F
Sbjct: 364 NVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYF 423
Query: 461 SECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
C + + N Y ++ L AG +++AE+ F M ++ ++ N ++ A
Sbjct: 424 EFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEM-VERGCPQDSYCYNALIDALAK 482
Query: 520 SGDFVKAEKIYDLM 533
SG +A ++ M
Sbjct: 483 SGKMEEALVLFKRM 496
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 18/251 (7%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
K + F D+ + P ++T+ LI A S +G D +Y M + G P P +
Sbjct: 278 KAMEKFTDMEKRNLEPDKITYLTLIQACYS---EGNFDSCLHLYQEMEERGLEIP-PHAY 333
Query: 258 NSLFRALVSKPGGLSK-YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERI 316
+ + GGL K + +F N+ G + IY+ LI + N++ E I
Sbjct: 334 SLVI-------GGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVN-EAI 385
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--M 374
+L ++ M+ GFE ++ K G +++A + + DN + A Y +
Sbjct: 386 NLFER-MKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFE--FCKDNEVAVNAMFYSSLI 442
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
+ K G ++ + F EM ER Y+ +I+ L K+ + E L K + G
Sbjct: 443 DGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCD 502
Query: 435 PLMPSYINLTN 445
+ +Y L +
Sbjct: 503 QTVYTYTILIS 513
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 99/478 (20%), Positives = 192/478 (40%), Gaps = 68/478 (14%)
Query: 108 PEQWR-RAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRV 166
P Q+ + +++LCK + ++R++ Q+ + T L + +++
Sbjct: 320 PNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKL 379
Query: 167 YEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYL 226
++ M ++ DF T + + + K + R +F +++++G P E+T+ LI Y
Sbjct: 380 FDEMKRKKIVP-DFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYC 438
Query: 227 SAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNL 286
A G + EA S++N+M++ G P + +L L K G + A + H +
Sbjct: 439 KA---GEMKEAFSLHNQMVE-KGLTPNVVTYTALVDGL-CKCGEV-----DIANELLHEM 488
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEG 346
GL+ Y+ LI NI E+ L +EM AGF
Sbjct: 489 SEKGLQPNVCTYNALINGLCKVGNI--EQAVKLMEEMDLAGF------------------ 528
Query: 347 DVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
P T + M+AY K+GE K+ E+ R M ++ ++ +
Sbjct: 529 ------------------FPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTF 570
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKP-------LMPSYINLTNMYLNLGMHDRLHL 458
+ ++ C + E E L+K ++ G+ P LM Y NM + ++ +H
Sbjct: 571 NVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMH- 629
Query: 459 AFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
+ P+ Y I ++ A N+++A + M ++ + S N ++ +
Sbjct: 630 -----AQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEM-VEKGFSLTAASYNSLIKGFY 683
Query: 519 SSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLI 576
F +A K+++ M + E E D + +N +E +L L E E +
Sbjct: 684 KRKKFEEARKLFEEMRTHGFIAEK---EIYDIFVDVNYEEGNWENTLELCDEAIEKCL 738
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 134/328 (40%), Gaps = 18/328 (5%)
Query: 209 QGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM--IQLGGYQPRPSLHNSLFRALVS 266
+G VP +++ +++ Y G + M +Q G +P +NS+ + +
Sbjct: 281 RGNVPDVVSYSVIVDGYCQVEQLG------KVLKLMEELQRKGLKPNQYTYNSII-SFLC 333
Query: 267 KPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQA 326
K G + +AE + + + +Y+ LI N+ E L EM++
Sbjct: 334 KTGRVV-----EAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVE--YKLFDEMKRK 386
Query: 327 GFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKS 386
S++ + G V +A K + +L + ++ Y K GE ++
Sbjct: 387 KIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEA 446
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNM 446
+ +M E+ + +V Y +++ LCK E ++ L+ E E G++P + +Y L N
Sbjct: 447 FSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALING 506
Query: 447 YLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV 505
+G + + L L P+ Y +++ G + KA E+ M D+ +
Sbjct: 507 LCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIM-LDKGLQP 565
Query: 506 NTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ N++++ + SG E++ M
Sbjct: 566 TIVTFNVLMNGFCMSGMLEDGERLIKWM 593
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 150/356 (42%), Gaps = 32/356 (8%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
K K R+ + + VP + + LI A + +EA NRM + P
Sbjct: 241 KVGKWREALTLVETENFVPDTVFYTKLISGLCEASL---FEEAMDFLNRM-RATSCLPNV 296
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
+++L G L+K L + + + + ++ G I++ L+ H+Y + D
Sbjct: 297 VTYSTLL------CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV--HAYCTSGDHS 348
Query: 315 RISLLKKEMQQAGFEEGKEVL-LSVLRVCAKEG----DVED-AEKTWLRLLESD---NGI 365
L K+M + G G V + + +C + D+ D AEK + +L + N I
Sbjct: 349 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKI 408
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTE 422
+F G++ K+ + REM +G +P Y K++ LC A + EL
Sbjct: 409 NVSSFT---RCLCSAGKYEKAFSVIREM---IGQGFIPDTSTYSKVLNYLCNASKMELAF 462
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESL 481
L +E G+ + +Y + + + G+ ++ F+E E C PN Y + +
Sbjct: 463 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 522
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
A + A E+F M S+ + N + + ++ + +G KA +I++ MC K
Sbjct: 523 LKAKKVSYANELFETMLSEGCLP-NIVTYSALIDGHCKAGQVEKACQIFERMCGSK 577
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 67/338 (19%), Positives = 131/338 (38%), Gaps = 33/338 (9%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E F V M+ Q + D + +K+ +Y+ K +F+++ G V T+ I
Sbjct: 424 EKAFSVIREMIGQGFIP-DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 482
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
++ ++ A G +++A +N M ++G P + +L A L + A
Sbjct: 483 MVDSFCKA---GLIEQARKWFNEMREVGC-TPNVVTYTALIHAY------LKAKKVSYAN 532
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+F +L+ G YS LI H ++K FE R
Sbjct: 533 ELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK----------ACQIFE----------R 572
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
+C + DV D + + + ++ + ++ + K ++ ++ M
Sbjct: 573 MCGSK-DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 631
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
+ Y +I+ LCK + + + + E E G + +Y +L + Y + D
Sbjct: 632 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 691
Query: 461 SECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
S+ LE C PN IY ++ L G ++A ++ M
Sbjct: 692 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 729
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 66/355 (18%), Positives = 140/355 (39%), Gaps = 54/355 (15%)
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
+++ +C+ + + ++ +G PS F+ L+ AY ++ G A + +M++ G + P
Sbjct: 309 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTS---GDHSYAYKLLKKMVKCG-HMP 364
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD---------------- 296
++N L ++ L+ L AE + +L +G+ + K
Sbjct: 365 GYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 424
Query: 297 ---------IYSGLI-------WLHSYQDNIDKERIS-LLKKEMQQAGFEEGKEVLLSVL 339
I G I + +Y N K ++ LL +EM++ G ++
Sbjct: 425 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 484
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
K G +E A K + + E + + AY K + + E+F M
Sbjct: 485 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 544
Query: 400 ASVPAYHKIIELLCKAEETEL----------------TESLMKEFVETGMKPLMPSYINL 443
++ Y +I+ CKA + E + K++ + +P + +Y L
Sbjct: 545 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 604
Query: 444 TNMYL-NLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ + + + + L + +E C PN+ +Y ++ L G +++A+E+ M
Sbjct: 605 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 659
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 117/279 (41%), Gaps = 22/279 (7%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI------ 245
K +K + ++F+ ++++G +P+ +T+ LI + A G +++AC I+ RM
Sbjct: 524 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA---GQVEKACQIFERMCGSKDVP 580
Query: 246 -------QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
Q RP++ + AL+ G + +++A + + G E + +Y
Sbjct: 581 DVDMYFKQYDDNSERPNVVT--YGALLD--GFCKSHRVEEARKLLDAMSMEGCEPNQIVY 636
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
LI +D+ + +K EM + GF S++ K + A K ++
Sbjct: 637 DALIDGLCKVGKLDEAQ--EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 694
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
LE+ + ++ K+G+ ++ ++ + M+E+ +V Y +I+ +
Sbjct: 695 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 754
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
E L++ G+ P +Y L + G D H
Sbjct: 755 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 793
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 133/306 (43%), Gaps = 21/306 (6%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
+ EA ++ ++M+++G Y+P N+L L +A + ++ G +
Sbjct: 167 ISEAVALVDQMVEMG-YKPDTVTFNTLIHGLFLHNKA------SEAVALIDRMVARGCQP 219
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
Y ++ + +ID +SLLKK M++ E + +++ K ++DA
Sbjct: 220 DLFTYGTVVNGLCKRGDIDLA-LSLLKK-MEKGKIEANVVIYNTIIDGLCKYKHMDDAFD 277
Query: 354 TWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
+ ++ GI F Y + G + + + +M ER + +V ++ +I+
Sbjct: 278 LFNKM--ETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDA 335
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECLEK-C 467
K + E L E ++ + P + +Y +L N + MHDRL A F+ + K C
Sbjct: 336 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC---MHDRLDEAQQIFTLMVSKDC 392
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
P+ Y ++ A +E+ E+F M +G NT + N ++ +GD A+
Sbjct: 393 LPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYNTLIQGLFQAGDCDMAQ 451
Query: 528 KIYDLM 533
KI+ M
Sbjct: 452 KIFKKM 457
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 130/306 (42%), Gaps = 17/306 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D+I + P+ +TF+ LI A+ +G L EA +++ MIQ P +NSL
Sbjct: 313 LLSDMIERKINPNVVTFNSLIDAFAK---EGKLIEAEKLFDEMIQRS-IDPNIVTYNSLI 368
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L +A+ IF +++ Y+ LI ++ E + L +
Sbjct: 369 NGFCMHD------RLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVE-EGMELFR- 420
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAK 379
EM Q G ++++ + GD + A+K + +++ +G+P Y ++ K
Sbjct: 421 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS--DGVPPDIITYSILLDGLCK 478
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
G+ K+L +F +Q+ ++ Y+ +IE +CKA + E L G+KP +
Sbjct: 479 YGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 538
Query: 440 YINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
Y + + + G+ + F E E P+ Y + + G+ + E+ M
Sbjct: 539 YTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMR 598
Query: 499 SDQTIG 504
S +G
Sbjct: 599 SCGFVG 604
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 79/164 (48%), Gaps = 2/164 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ K G+ +L + ++M++ A+V Y+ II+ LCK + + L + G+
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 287
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEE 492
KP + +Y +L + N G S+ +E K PN + +++ G + +AE+
Sbjct: 288 KPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEK 347
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
+F+ M ++I N + N +++ + +A++I+ LM K
Sbjct: 348 LFDEMIQ-RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 390
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 166/401 (41%), Gaps = 58/401 (14%)
Query: 178 FDFALATKLAD---------YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA 228
FD A+A +A+ ++ KE K ++ ++ ++++G P++++++ +I+ +
Sbjct: 442 FDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCR- 500
Query: 229 PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
QG LD A S+++ M+ G +P ++ L K G + + N++
Sbjct: 501 --QGNLDMAASVFSDMLDCG-LKPNVITYSILMDGYF-KNGDTEYAFYVFDRMVDENIVP 556
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
S I +GL + + D +LKK +++ GF S++ KEG V
Sbjct: 557 SDFTYNIKI-NGLCKVGRTSEAQD-----MLKKFVEK-GFVPVCLTYNSIMDGFIKEGSV 609
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
A + + ES + + + K +L++ EM+ + + AY +
Sbjct: 610 SSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGAL 669
Query: 409 IELLCKAEETELTESLMKEFVETGMKP-------LMPSYINLTNMYLNLGMHDRLHLAFS 461
I+ CK ++ E L E ++ G+ P L+ Y NL NM L + R+
Sbjct: 670 IDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGI 729
Query: 462 EC------------LEKCR-----------------PNRTIYGIYLESLKNAGNIEKAEE 492
C L++ R P+ IY + + L G +E A++
Sbjct: 730 SCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQK 789
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
I M D +I N N +++ + +G+ +A ++++ M
Sbjct: 790 ILAEMERD-SITPNVPIYNALIAGHFKAGNLQEAFRLHNEM 829
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 167/418 (39%), Gaps = 35/418 (8%)
Query: 116 LAWLCKELPSHKGGTL-VRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQH 174
L+WLCKE + TL ++L+ + + + HC R + V+ M+
Sbjct: 460 LSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHC-RQGNLDMAASVFSDML--- 515
Query: 175 WYRFDFALATKLADYMGKERKFAKCRD------IFDDIINQGRVPSEMTFHILIVAYLSA 228
D L + Y + K D +FD ++++ VPS+ T++I I
Sbjct: 516 ----DCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKV 571
Query: 229 PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
G EA + + ++ G+ P +NS+ + K G +S A + +
Sbjct: 572 ---GRTSEAQDMLKKFVE-KGFVPVCLTYNSIMDGFI-KEGSVS-----SALTAYREMCE 621
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISL-LKKEMQQAGFEEGKEVLLSVLRVCAKEGD 347
SG+ Y+ LI +N D ++L ++ EM+ G E +++ K+ D
Sbjct: 622 SGVSPNVITYTTLINGFCKNNNTD---LALKMRNEMRNKGLELDIAAYGALIDGFCKKQD 678
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
+E A +WL D G+ + +Y + Y + +L + + M S + Y
Sbjct: 679 IETA--SWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTY 736
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-L 464
+I+ L K L L E G+ P + Y L N G + +E
Sbjct: 737 TTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMER 796
Query: 465 EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
+ PN IY + AGN+++A + N M D+ + N + +I+++ + G+
Sbjct: 797 DSITPNVPIYNALIAGHFKAGNLQEAFRLHNEML-DKGLTPNDTTYDILINGKIKGGN 853
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 140/361 (38%), Gaps = 17/361 (4%)
Query: 177 RFDFALATKLADYM----GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQG 232
RFDF ++ +Y+ K K F+ ++ VP + L+ A + +
Sbjct: 167 RFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDM-- 224
Query: 233 CLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLE 292
+ EA +Y +M+ G +H F + L ++A+ F + G++
Sbjct: 225 -IYEAREVYEKMVLKG-------VHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVK 276
Query: 293 IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
+ YS I + ++ N+D E L K+M+ G+ + SV+ C K+G++ +A
Sbjct: 277 LDAAAYS--IVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEAL 334
Query: 353 KTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+ ++ + ++ Y K + + +LE F +M E S + Y +IE
Sbjct: 335 RLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWC 394
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRT 472
CK L + + P + +L +L + + F E + N
Sbjct: 395 CKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIF 454
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDL 532
Y L L G + +A ++ M D+ + S N ++ + G+ A ++
Sbjct: 455 TYNSLLSWLCKEGKMSEATTLWQKML-DKGLAPTKVSYNSMILGHCRQGNLDMAASVFSD 513
Query: 533 M 533
M
Sbjct: 514 M 514
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 11/257 (4%)
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE--GKEVLLSVLR 340
F LL +GL + I + L+ D+ LL + + + +LL L
Sbjct: 134 FGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 193
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKSLEIFREMQERL 397
K G +D LR++ + +P A+ ++ + K G+ K+ ++F+EM +R
Sbjct: 194 DQGKSGQADD----LLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 249
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
Y ++ LCKA + E+ +++ V G+ P +Y NL Y + G
Sbjct: 250 IPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAV 309
Query: 458 LAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F E + P+ + + + SL G I++A ++F+ M + + + S NI+L+
Sbjct: 310 RVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTM-AMKGQNPDVFSYNIMLNG 368
Query: 517 YLSSGDFVKAEKIYDLM 533
Y + G V ++DLM
Sbjct: 369 YATKGCLVDMTDLFDLM 385
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 151/364 (41%), Gaps = 17/364 (4%)
Query: 165 RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
RV++ M +Q D L + K K + RD+FD + +G+ P +++I++
Sbjct: 310 RVFKEMRRQSILP-DVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 368
Query: 225 YLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
Y + +GCL + +++ M+ G P N L +A + G+ L +A IF+
Sbjct: 369 YAT---KGCLVDMTDLFDLMLG-DGIAPVICTFNVLIKAYAN--CGM----LDKAMIIFN 418
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
+ G++ Y+ +I +D +M G K +++
Sbjct: 419 EMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKF--NQMIDQGVAPDKYAYHCLIQGFCT 476
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVP 403
G + A++ ++ + + F + K+G M + IF ++ +G +
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIF-DLTVNVGLHPTAV 535
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC 463
Y +++ C + E + V G++P Y L N Y +G D F E
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595
Query: 464 LEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
L+K +P+ +Y I ++ L AG A+ F+ M ++ I +N + +I+L +
Sbjct: 596 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM-TESGIAMNKCTYSIVLRGLFKNRC 654
Query: 523 FVKA 526
F +A
Sbjct: 655 FDEA 658
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/322 (18%), Positives = 135/322 (41%), Gaps = 57/322 (17%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P + ++ +I + +G +++AC ++ M+Q G P ++S+ AL
Sbjct: 217 PDVVAYNTVIDGFFK---EGDVNKACDLFKEMVQ-RGIPPDFVTYSSVVHALCKARA--- 269
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ +AE ++ G+ Y+ LI+ +S KE + + K+ +Q+
Sbjct: 270 ---MDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQW-KEAVRVFKEMRRQS------ 319
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
+L V+ F M + K G+ ++ ++F
Sbjct: 320 -ILPDVV-----------------------------TFNMLMGSLCKYGKIKEARDVFDT 349
Query: 393 MQERLGSASVPAYHKIIELL----CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
M + + V +Y+ ++ C + T+L + ++ + G+ P++ ++ L Y
Sbjct: 350 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD----GIAPVICTFNVLIKAYA 405
Query: 449 NLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
N GM D+ + F+E + +PN Y + +L G ++ A E FN M DQ + +
Sbjct: 406 NCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQM-IDQGVAPDK 464
Query: 508 RSCNIILSAYLSSGDFVKAEKI 529
+ + ++ + + G +KA+++
Sbjct: 465 YAYHCLIQGFCTHGSLLKAKEL 486
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 152/343 (44%), Gaps = 21/343 (6%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + K+ ++ + D++ +G P+E+T++ LI ++G LD+A S+ RM+
Sbjct: 263 LIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLC---LKGKLDKAVSLLERMV 319
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
P + +L LV + + + A + ++ G + + IYS LI
Sbjct: 320 S-SKCIPNDVTYGTLINGLVKQ-----RRAMDGARLLI-SMEERGYRLNQHIYSVLIS-G 371
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+++ +E ++L KK M + G V +V+ +EG +A K L + S +
Sbjct: 372 LFKEGKAEEAMTLWKK-MAEKGCRPNIVVYSAVIDGLCREGKPNEA-KEILNGMISSGCL 429
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
P + Y M+ + K G ++++++REM E S + Y +I+ LC +
Sbjct: 430 PN-VYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMM 488
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL----EKCRPNRTIYGIYLE 479
+ + + G+KP +Y ++ +G D + E L K +P+ Y I L+
Sbjct: 489 VWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLD 548
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
L ++ +A ++ N M D+ + +CN L+ D
Sbjct: 549 GLCMQKDVSRAVDLLNCML-DRGCDPDVITCNTFLNTLSEKSD 590
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 4/144 (2%)
Query: 361 SDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
S NG+ +F ++A K+G +++E+FR M E+ Y +++ LCK E +
Sbjct: 184 SPNGL---SFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL-HLAFSECLEKCRPNRTIYGIYLE 479
L+ E G P Y L + G R+ L + L+ C PN Y +
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIH 300
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTI 503
L G ++KA + M S + I
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCI 324
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 90/227 (39%), Gaps = 11/227 (4%)
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
+ K + F+ G L S++ A GD EK R+ + I +F+ AY
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAY 122
Query: 378 AKIGEFMKSLEIFREMQERLGSA-SVPAYHKIIELLCKA----EETELTESLMKEFVETG 432
K K++++F M + SV +++ ++ ++ E + ++ +
Sbjct: 123 GKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN 182
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAE 491
+ P S+ + LG DR F E KC P+ Y ++ L I++A
Sbjct: 183 ISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 492 EIFNHMHSDQTIGVNTRSC--NIILSAYLSSGDFVKAEKIYDLMCLK 536
+ + M S+ G + N+++ GD + K+ D M LK
Sbjct: 243 LLLDEMQSE---GCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLK 286
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 158/379 (41%), Gaps = 32/379 (8%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L D + KE K + R + ++ +G +PS +T++ LI Y +G +D+A I +
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCK---EGMIDDAFEILDL 394
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M + P +N L L K + +A + + +L L Y+ LI
Sbjct: 395 M-ESNSCGPNTRTYNELICGLCKK------RKVHKAMALLNKMLERKLSPSLITYNSLI- 446
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
H D E L M + G + + KEG VE+A + +
Sbjct: 447 -HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSV--KAK 503
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEET 418
G+ +Y ++ Y K+G+ + + M L A +P Y+ +IE LCK ++
Sbjct: 504 GVKANEVIYTALIDGYCKVGKIDVAYSLLERM---LNDACLPNSYTYNVLIEGLCKEKKM 560
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIY 477
+ SL+ + + G+KP + +Y L L G D F+ + +P+ Y +
Sbjct: 561 KEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG------DFVKAEKIYD 531
L + + G +E+ +++ M+ ++ I + + +++ Y G DF+K + D
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMN-EEGILPDLVTYTVLIDGYARLGLTHRAFDFLKC--MVD 677
Query: 532 LMCLKKYEIESAWMEKLDY 550
C I S ++ L +
Sbjct: 678 TGCKPSLYIVSILIKNLSH 696
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 118/270 (43%), Gaps = 20/270 (7%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
+DE ++Y ++L Q P+++ F A+V+ G + +AE ++ +GL
Sbjct: 175 IDEMKTVY---LELLNNQISPNIYT--FNAMVN--GYCKIGNVVEAELYASKIVQAGLHP 227
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
Y+ LI H +D L M Q G + + +++ + G + +A K
Sbjct: 228 DTFTYTSLILGHCRNKGVDNAYEVFLI--MPQKGCQRNEVSYTNLIHGLCEAGRINEALK 285
Query: 354 TWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+ + E DN PT + + A + G +++L +F EM+E+ +V Y +I+ L
Sbjct: 286 LFADMTE-DNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL 344
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-----KC 467
CK + + ++ E E G+ P + +Y L + Y GM D AF E L+ C
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDD---AF-EILDLMESNSC 400
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
PN Y + L + KA + N M
Sbjct: 401 GPNTRTYNELICGLCKKRKVHKAMALLNKM 430
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 168/400 (42%), Gaps = 31/400 (7%)
Query: 107 LPEQWRRAK-LAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAV---HCMRIRENET 162
+P+QW + + LCKE + GTL + A K ++ + Y A+ +C ++ + +
Sbjct: 471 VPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKA--KGVKANEVIYTALIDGYC-KVGKIDV 527
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
+ + E M+ + L + + KE+K + + ++ G P+ +T+ ILI
Sbjct: 528 AYSLLERMLNDACLPNSYTYNV-LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILI 586
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
L G D A ++N M+ LG YQP + + A S+ L++ + +
Sbjct: 587 GEMLK---DGAFDHALKVFNHMVSLG-YQPDVCTYTAFLHAY------FSQGMLEEVDDV 636
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
+ G I D+ + + + Y R K M G + ++ +++
Sbjct: 637 IAKMNEEG--ILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNL 694
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA--KIGEFMKSLEIFREMQERLGSA 400
+ E +++ S+ GI + + V ++ K E+ +L++F +M E +
Sbjct: 695 SHENRMKETR--------SEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTI 746
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH-DRLHLA 459
V Y +I C+ E E + L+ E GM P Y +L + LG++ + + L
Sbjct: 747 DVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLV 806
Query: 460 FSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+ P Y + + L G+ EKA+ +F+ + S
Sbjct: 807 DAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLS 846
>gi|17064738|gb|AAL32523.1| Unknown protein [Arabidopsis thaliana]
gi|27311917|gb|AAO00924.1| Unknown protein [Arabidopsis thaliana]
Length = 532
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 165/401 (41%), Gaps = 43/401 (10%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+I+ + + EWM+ Q + D + K R F+D+ P +
Sbjct: 105 KIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDM------PDQ 158
Query: 216 MTFHILIVAYLSAPVQGCLDE----------------ACSIYNRMIQL----GGYQPRPS 255
M H + L + VQ L + +C YN M+ + G ++ P
Sbjct: 159 MRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPV 218
Query: 256 LHNSL-FRA---LVSKPGGLSKYY----LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
L L R +V+ L+ + ++ AE ++ L YS L L++
Sbjct: 219 LIKELKIRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAK 278
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
DN++K R++L +EM++ ++ + S++ + A GD + TW ++ S +
Sbjct: 279 TDNVEKARLAL--REMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMND 336
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
++ + A K+GEF ++ ++ E + G+ + I+ +E L E +
Sbjct: 337 AEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYER 396
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRP---NRTIYGIYLESLKNA 484
VE G+ P ++ LT YL +++ F + ++ + N + + L+
Sbjct: 397 IVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAIDSVKKWTVNVRLVKGACKELEEQ 456
Query: 485 GNIEKAEEIFNHMHSDQTIG-VNTRSCNIILSAYLSSGDFV 524
GN++ AE++ + Q G VNT+ N +L Y +G+
Sbjct: 457 GNVKGAEKLMTLL---QKAGYVNTQLYNSLLRTYAKAGEMA 494
>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
Length = 635
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 160/381 (41%), Gaps = 36/381 (9%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
TKL + M ++ + + + I D II G PS +T+ L+ A +Q D SI ++
Sbjct: 76 TKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALT---IQKHFDSIHSIISQ 132
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLS---KYYLQQAEF-------IFHNLLTS-GLE 292
++ G +P N++ A S+ G + KY+ + E F+ L+ G+
Sbjct: 133 -VEENGMEPDSIFFNAVINAF-SESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIA 190
Query: 293 IQKDIYSGLIWLHSYQDNIDKE-------------RISLLKK-----EMQQAGFEEGKEV 334
+ + L+ L S +N+ + +++K +M +G +
Sbjct: 191 GEPEESQKLLZLMSQDENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVT 250
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
++ A+ G+ AE L + S+ + Y K G+ ++L+ M+
Sbjct: 251 YNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMK 310
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
+ ++ ++ +I+ A + + ++ E G+KP + ++ + N + G D
Sbjct: 311 DLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMD 370
Query: 455 RLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
+ F + ++ + +P+ +Y I + AG EKAEEI N M N I
Sbjct: 371 KCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAM-IKSGFHPNVVMFTTI 429
Query: 514 LSAYLSSGDFVKAEKIYDLMC 534
++ + S+G A KI++ MC
Sbjct: 430 INGWCSAGRMEYAIKIFEKMC 450
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 86/453 (18%), Positives = 187/453 (41%), Gaps = 54/453 (11%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
MM++ + + + + M K K R +FD+++ +G P ++++ L+ Y A
Sbjct: 250 MMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKA- 308
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
GC EA S++ M Q G P SL + K G L++A + +
Sbjct: 309 --GCSHEALSVFAEMTQ-KGIMPDVVTFTSLIHVMC-KAGN-----LERAVTLVRQMRER 359
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
GL++ + ++ LI + +D +++ + M+Q + +++ G ++
Sbjct: 360 GLQMNEVTFTALIDGFCKKGFLDDALLAV--RGMKQCRIKPSVVCYNALINGYCMVGRMD 417
Query: 350 DAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
+A + L +E+ G+ Y + AY K + + E+ ++M E+ Y
Sbjct: 418 EA-RELLHEMEA-KGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSS 475
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT-------NMYLNLGMHDRLHLAF 460
+I +LC + L K ++ G++P +Y +L N+ L +HD++ A
Sbjct: 476 LIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKA- 534
Query: 461 SECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT------------- 507
P+ Y + + L + +A+++ ++ + I NT
Sbjct: 535 -----GVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAE 589
Query: 508 -RSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDY----------VLSLNR 556
+S +L + G +A+K+Y M + + ++ + L + LS ++
Sbjct: 590 LKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHK 649
Query: 557 KEVKKPVSLNLSSEQRENLIGLLLGGLCIESDE 589
+ ++ + N S+ + GL G+ +E+D+
Sbjct: 650 QMLQGGFAPN-STSTISLIRGLFENGMVVEADQ 681
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 137/316 (43%), Gaps = 19/316 (6%)
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG 269
G VPS + ++ +++A A L A ++ M+ G P +N L RAL +
Sbjct: 151 GYVPSVLAYNAVLLALSDAS----LTSARRFFDSMLS-DGVAPNVYTYNILVRALCGRG- 204
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID-KERISLLKKEMQQAGF 328
+ ++A I ++ +G Y+ L+ +D ER L M++ G
Sbjct: 205 -----HRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAER---LVGMMREGGL 256
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
+ S++ K G +EDA K + ++ ++ + Y K G ++L
Sbjct: 257 KPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALS 316
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+F EM ++ V + +I ++CKA E +L+++ E G++ ++ L + +
Sbjct: 317 VFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFC 376
Query: 449 NLGMHDRLHLAFSECLEKCR--PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN 506
G D LA +++CR P+ Y + G +++A E+ + M + + + +
Sbjct: 377 KKGFLDDALLAVRG-MKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEA-KGLKPD 434
Query: 507 TRSCNIILSAYLSSGD 522
+ + I+SAY + D
Sbjct: 435 VVTYSTIISAYCKNCD 450
>gi|297814019|ref|XP_002874893.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320730|gb|EFH51152.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 165/403 (40%), Gaps = 47/403 (11%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+I+ + + EWM+ Q + D + K R F+D+ P +
Sbjct: 98 KIKRYKHALEICEWMVLQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDL------PDQ 151
Query: 216 MTFHILIVAYLSAPVQGCL-DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY 274
M H + L + VQ L D+A +++ +M + G + +N + +SK G K
Sbjct: 152 MRGHAACTSLLHSYVQNKLSDKAEALFEKMGECG-FLKSCLPYNHMLSMFISK-GQFEKV 209
Query: 275 YL--------QQAEFIFHNLLTSGLEIQKDI---------------------YSGLIWLH 305
+ + + +NL + D+ YS L L+
Sbjct: 210 SVLIKELKMKTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKESKLNPDWVTYSVLTNLY 269
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+ DN++K +++L KEM++ ++ + S++ + A GD + TW ++ S +
Sbjct: 270 AKTDNLEKAKLAL--KEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVRSSFKKM 327
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
++ + A K+GEF ++ ++ E + G+ + I+ +E L E
Sbjct: 328 NDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEILLGEKFY 387
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRP---NRTIYGIYLESLK 482
+ VE G+ P ++ LT YL +++ F + ++ + N + + L+
Sbjct: 388 ERIVEKGINPSYSTWEILTWAYLKRKDLEKVLDCFEKAIDSVKKWTVNVRLVKAVCKELE 447
Query: 483 NAGNIEKAEEIFNHMHSDQTIG-VNTRSCNIILSAYLSSGDFV 524
GN++ AE++ + Q G VNT+ N +L Y +G+
Sbjct: 448 EQGNVKGAEKLMTLL---QKAGHVNTQLYNSLLRTYAKAGEMA 487
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 10/241 (4%)
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQ-DNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ ++ G + Y+ LI H Y N KE +++ EMQ+ G E + +++
Sbjct: 399 LLEQMVKDGCQPNVVTYNRLI--HCYGCANYLKEALNVFN-EMQEVGCEPDRVTYCTLID 455
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLG 398
+ AK G ++ A + R+ E+ G+ F Y + K G + +F EM E
Sbjct: 456 IHAKAGFIDVAMSMYKRMQEA--GLSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGC 513
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
++ Y+ +I L KA E+ L + G +P +Y + + G +
Sbjct: 514 VPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAES 573
Query: 459 AFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
F E +K P+ +YG+ ++ AGN+EKA E + M + + N +CN +LSA+
Sbjct: 574 VFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQAMLNAGLLP-NVPTCNSLLSAF 632
Query: 518 L 518
L
Sbjct: 633 L 633
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 127/318 (39%), Gaps = 43/318 (13%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
++++ ++W+ +Q +R D T + +G+ R+F + + ++ G P+
Sbjct: 353 QLQDPSVALGFFDWLRRQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNV 412
Query: 216 MTFHILIVAYLSA--------------------------------PVQGCLDEACSIYNR 243
+T++ LI Y A G +D A S+Y R
Sbjct: 413 VTYNRLIHCYGCANYLKEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKR 472
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M Q G P ++ + L K G L+ A ++F ++ G Y+ +I
Sbjct: 473 M-QEAGLSPDTFTYSVIINCL-GKAGNLAA-----AHWLFCEMVEHGCVPNLVTYNIMIA 525
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
L + N E L +MQ AGF+ K V+ G +E+AE ++ ++ N
Sbjct: 526 LQAKARNY--EMALKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVE-MQQKN 582
Query: 364 GIPT-PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+P P + ++ + K G K+ E ++ M +VP + ++ +
Sbjct: 583 WVPDEPVYGLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRLPDAY 642
Query: 423 SLMKEFVETGMKPLMPSY 440
+L++ V G++P + +Y
Sbjct: 643 NLVQSMVALGLRPSLQTY 660
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 153/372 (41%), Gaps = 22/372 (5%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T + + M KE K + R I D+++ +G VPS T++ LI Y +G ++ A I +
Sbjct: 113 TVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCK---EGMVEAAQEILDL 169
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M P +N L K + +A + +L S L Y+ LI
Sbjct: 170 M-HSNSCNPNERTYNELICGFCRKKN------VHRAMALLSKMLESRLTPSVVTYNSLIH 222
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+D L M + G + + K+G +E+A + L E
Sbjct: 223 GQCKIGYLDSAY--RLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEK-- 278
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
GI +Y ++ Y K G+ + + M + Y+ +I+ LCK + +
Sbjct: 279 GIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEA 338
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLES 480
LM+ ++ G+K +P+Y L L G D H + + +P+ IY ++ +
Sbjct: 339 LLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHA 398
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG----DFVKAEKIYDLMCLK 536
GNI++AE++ + M ++ + + + +++ AY G F ++++D C
Sbjct: 399 FCTRGNIKEAEDMMSMMF-ERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDP 457
Query: 537 KYEIESAWMEKL 548
+ S ++ L
Sbjct: 458 SHHTYSCLIKHL 469
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 137/330 (41%), Gaps = 53/330 (16%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + KERK + + + +I +G + T+ ILIVA L +G D A I ++M+
Sbjct: 325 LIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLK---EGDFDYAHRILDQMV 381
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGL-------EIQKDIY 298
GYQP ++ + A ++ +++AE + + G+ + D Y
Sbjct: 382 S-SGYQPDVYIYTAFIHAFCTRGN------IKEAEDMMSMMFERGVMPDALTYTLVIDAY 434
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
GL L+ D + K M G + +++ KE + K + +
Sbjct: 435 GGLGLLNPAFDVL---------KRMFDTGCDPSHHTYSCLIKHLLKE----ELTKKYKNV 481
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
D+ IP F + + K+ +F +LE+F +M E S ++ Y K+I LCK
Sbjct: 482 ALCDS-IPNVFFADVADVW-KMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRL 539
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-----------MHDRLHLAFSECLEKC 467
+ + L E G+ P Y +L N LG M + HL E L
Sbjct: 540 GVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESL--- 596
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
N G+Y E G+ EKA+ +F+++
Sbjct: 597 --NVLFCGLYEE-----GSKEKAKVVFSNL 619
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 138/316 (43%), Gaps = 27/316 (8%)
Query: 188 DYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL 247
D + K+ + + +F+ + +G +E+ + LI Y A G +D+A S+ +RM+
Sbjct: 257 DTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKA---GKMDDANSLLDRMLT- 312
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
P S +N+L L + +Q+A + +++ GL+ Y+ LI
Sbjct: 313 EDCLPNSSTYNALIDGLCKERK------VQEALLLMESMIQKGLKCTVPTYTILIVAMLK 366
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+ + D L +M +G++ + + + G++++AE + E G+
Sbjct: 367 EGDFDYAHRIL--DQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFER--GVMP 422
Query: 368 PAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
A Y + +AY +G + ++ + M + S Y +I+ L L E L
Sbjct: 423 DALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL-------LKEELT 475
Query: 426 KEFVETGMKPLMPS--YINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLK 482
K++ + +P+ + ++ +++ + L L F + LE C PN Y + L
Sbjct: 476 KKYKNVALCDSIPNVFFADVADVWKMMKFETALEL-FEKMLEHGCSPNINTYAKLIIGLC 534
Query: 483 NAGNIEKAEEIFNHMH 498
G + A+++F+HM+
Sbjct: 535 KVGRLGVAQKLFDHMN 550
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 7/156 (4%)
Query: 346 GDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
G V++ + ++ E D + + A + G M+++ +F EM+ER ++ Y
Sbjct: 53 GRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTY 112
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM----HDRLHLAFS 461
+I +CK + E ++ E VE G+ P +P+Y L + Y GM + L L S
Sbjct: 113 TVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHS 172
Query: 462 ECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
C PN Y + N+ +A + + M
Sbjct: 173 ---NSCNPNERTYNELICGFCRKKNVHRAMALLSKM 205
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 102/240 (42%), Gaps = 7/240 (2%)
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
E I+L EM++ G E ++ KE +E+ + ++E P +
Sbjct: 92 EAINLFS-EMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNAL 150
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
++ Y K G + EI M + + Y+++I C+ + +L+ + +E+ +
Sbjct: 151 IDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRL 210
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEE 492
P + +Y +L + +G D + + E P++ Y +++++L G IE+A
Sbjct: 211 TPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANV 270
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM----CLKKYEIESAWMEKL 548
+FN + ++ I N ++ Y +G A + D M CL +A ++ L
Sbjct: 271 LFNSL-KEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGL 329
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 150/347 (43%), Gaps = 21/347 (6%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
KE++ +F ++ + VP+ +TF+ LI Y A G +D A + RM + +
Sbjct: 113 KEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKA---GEVDVAIGLRERMKK---EK 166
Query: 252 PRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
PS+ F +L+S GL K +++A + + + +G YS I +
Sbjct: 167 VEPSIIT--FNSLLS---GLCKARRIEEARCMLNEIKCNGFVPDGFTYS--IIFDGLLKS 219
Query: 311 IDKERISL-LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
D +L L +E G + +L KEG VE AE+ L+E +G+
Sbjct: 220 DDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVE--HGLVPGE 277
Query: 370 FVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
+Y + Y +IG+ +++ +M+ R + A++ +I+ C+ + + E +K+
Sbjct: 278 VIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKK 337
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGN 486
V G+ P + +Y L + Y L + R E E +PN YG + L G
Sbjct: 338 MVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGK 397
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
I +AE + M + N N+++ + G +A + +D M
Sbjct: 398 ILEAEMVLRDMVGRGVL-PNANIYNMLIDGSCTVGKLREALRFFDEM 443
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 74/394 (18%), Positives = 153/394 (38%), Gaps = 52/394 (13%)
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
+ D + L + + KE K K ++ ++ G VP E+ ++ ++ Y G +D
Sbjct: 239 KIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQI---GDMDR 295
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
A +M + G +P NS+ + +AE ++ G+ +
Sbjct: 296 AILTIEQM-ESRGLRPNCIAFNSVIDKFCEMQ------MIDKAEEWVKKMVGKGIAPSVE 348
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
Y+ I + Y R + +EM++ G + S++ K+G + +AE
Sbjct: 349 TYN--ILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLR 406
Query: 357 RLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCK 414
++ G+ A +Y M + +G+ ++L F EM + A++ Y+ +I+ LCK
Sbjct: 407 DMV--GRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCK 464
Query: 415 AEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR------------------- 455
+ + E + TG P + +Y +L + Y N G +
Sbjct: 465 MGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINT 524
Query: 456 LHLAFSECLEK----------------CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
H S C ++ P+R +Y + + G+++KA + M
Sbjct: 525 FHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEM-V 583
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
D + + ++ N ++ +L G + + + D M
Sbjct: 584 DMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDM 617
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 17/247 (6%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP-VQGCLDEACSIYNRMIQLGGY 250
K K + ++F I + G P +T++ LI Y +A Q CL+ +Y M +LG
Sbjct: 464 KMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLE----LYETMKKLG-- 517
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
+P+++ F L+S G SK ++ E +F+ +L L + +Y+ +I H YQ+
Sbjct: 518 -LKPTINT--FHPLIS---GCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMI--HCYQET 569
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPA 369
++ L+KEM G + S++ KEG + + K + +++ IP
Sbjct: 570 GHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSET-KDLVDDMKAKGLIPEADT 628
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
+ ++ + + +F + +REM E +V +++ L K + +S+ E +
Sbjct: 629 YSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMI 688
Query: 430 ETGMKPL 436
GM L
Sbjct: 689 ANGMDNL 695
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 151/360 (41%), Gaps = 28/360 (7%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
+Y++M Q+ F + + + + +KF D+F +++ G P ++ + A
Sbjct: 18 LYDFMRQEGRLP-SFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYG---RAM 73
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK-YYLQQAEFIFH 284
L+A G L A ++ M + P ++N L GGL K ++ AE +F
Sbjct: 74 LAAVKLGDLKLAMELFETM-KRRKVVPNVFVYNVLI-------GGLCKEKRIRDAEKLFG 125
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL-LKKEMQQAGFEEGKEVLLSVLRVCA 343
+ L + ++ LI + +D +++ L++ M++ E S+L
Sbjct: 126 EMSVRNLVPNRVTFNTLIDGYCKAGEVD---VAIGLRERMKKEKVEPSIITFNSLLSGLC 182
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFM-KSLEIFREMQERLGSA 400
K +E+A + L ++ NG F Y + + K + +L+++RE +
Sbjct: 183 KARRIEEA-RCMLNEIKC-NGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGK--GV 238
Query: 401 SVPAYHKIIEL--LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
+ Y I L LCK + E E ++K VE G+ P Y + N Y +G DR L
Sbjct: 239 KIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAIL 298
Query: 459 AFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
+ + RPN + ++ I+KAEE M + I + + NI++ Y
Sbjct: 299 TIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVG-KGIAPSVETYNILIDGY 357
>gi|225438599|ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Vitis vinifera]
gi|296082481|emb|CBI21486.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 141/367 (38%), Gaps = 73/367 (19%)
Query: 113 RAKLAWLCKELPSHKGG--TLVRILNAQKKWLRQEDGTYLAVHCMRIRENETG------- 163
++++ L + L + GG L+ LN K +R E HC R+ E E G
Sbjct: 65 KSEVEELVRVLMKNFGGERPLISTLNKYVKVIRTE-------HCFRLFE-ELGKTDKWLQ 116
Query: 164 -FRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
V+ WM +Q WY D + +KL MGK+ + +F ++ N G P ++ LI
Sbjct: 117 CLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALI 176
Query: 223 VAYL-SAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF 281
A+L S L +A +++M + +P +N L RA + QA
Sbjct: 177 TAHLHSRDKSKALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQN------VNQANA 230
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+F E+ + I S I+ + V+
Sbjct: 231 LFK-------ELNESIVSPDIFTFN------------------------------GVMDA 253
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSAS 401
K G +++ E R+ + F +++Y + EF K ++F+ + +
Sbjct: 254 YGKNGMIKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSLLRSKEKPT 313
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
+P ++ +I KA E E++ K+ + G P +Y +L MY F
Sbjct: 314 LPTFNSMITNYGKARLKEKAENVFKKMTDMGYAPNFITYESLIMMY-----------GFC 362
Query: 462 ECLEKCR 468
+C+ + R
Sbjct: 363 DCISRAR 369
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 119/272 (43%), Gaps = 17/272 (6%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ TF +I + +G + +A +++ M+++ G P +N+L LV K
Sbjct: 589 PTTRTFMPIIHGFAR---KGEMKKALDVFD-MMRMSGCIPTVHTYNALILGLVEK----- 639
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+++AE I + +G+ + Y+ + +H Y D + +++ G +
Sbjct: 640 -RKMEKAEQILDEMTLAGVSPNEHTYTTI--MHGYASLGDTGKAFTYFTKLRDEGLQLDV 696
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIF 390
++L+ C K G ++ A + S IP F+Y + + +A+ G+ ++ ++
Sbjct: 697 YTYEALLKACCKSGRMQSALAVTKEM--SAQNIPRNTFIYNILIDGWARRGDIWEAADLM 754
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
++M+ + Y I KA + + ++E G+KP + +Y L N +
Sbjct: 755 QQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARA 814
Query: 451 GMHDRLHLAFSEC-LEKCRPNRTIYGIYLESL 481
+ ++ F E L +P+R +Y + SL
Sbjct: 815 SLPEKALSCFEEMKLSGLKPDRAVYHCLMTSL 846
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 100/232 (43%), Gaps = 4/232 (1%)
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
+ ++ Y D R ++M+ G E V +++ A D+E+A ++ E
Sbjct: 316 LMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEE 375
Query: 362 DNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
+ + + +AK G + F+E +E+ S + Y II C+ +
Sbjct: 376 GIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKA 435
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLE 479
E+L++E E G+ + Y + + Y +G D+ L F E ++C P+ YG +
Sbjct: 436 EALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVF-ERFKECGLNPSVITYGCLIN 494
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
G + KA E+ M I N ++ +++++ +L D+ A I++
Sbjct: 495 LYAKLGKVSKALEVSKEMEH-AGIKHNMKTYSMLINGFLKLKDWANAFAIFE 545
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 117/307 (38%), Gaps = 46/307 (14%)
Query: 269 GGLSKYY-----LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEM 323
G + YY + +A F + G+E +Y+ LI H+Y D E ++M
Sbjct: 315 GLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLI--HAYAVGRDMEEALSCVRKM 372
Query: 324 QQAGFEEGKEVLLSVLRVCAKEGDVEDAE------------------------------- 352
++ G E ++ AK G+ E A+
Sbjct: 373 KEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNM 432
Query: 353 ---KTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
+ +R +E + GI P +Y M+ Y +G+ K L +F +E + SV Y
Sbjct: 433 DKAEALVREMEEE-GIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGC 491
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EK 466
+I L K + + KE G+K M +Y L N +L L F + + +
Sbjct: 492 LINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDG 551
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
+P+ +Y + + G +++A M Q TR+ I+ + G+ KA
Sbjct: 552 IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQK-QRHKPTTRTFMPIIHGFARKGEMKKA 610
Query: 527 EKIYDLM 533
++D+M
Sbjct: 611 LDVFDMM 617
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 138/378 (36%), Gaps = 51/378 (13%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ +Y + + R+ F+ + +G PS + LI AY V ++EA S +M
Sbjct: 317 MVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAY---AVGRDMEEALSCVRKMK 373
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ G + SL + G + A+ F + IY +I+ +
Sbjct: 374 EEG-------IEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAY 426
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+ N+DK L +EM++ G + ++ +++ GD + + R E
Sbjct: 427 CQRCNMDKA--EALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNP 484
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG--------------------------- 398
+ + YAK+G+ K+LE+ +EM E G
Sbjct: 485 SVITYGCLINLYAKLGKVSKALEVSKEM-EHAGIKHNMKTYSMLINGFLKLKDWANAFAI 543
Query: 399 ---------SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
V Y+ II C + + +KE + KP +++ + + +
Sbjct: 544 FEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFAR 603
Query: 450 LG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTR 508
G M L + + C P Y + L +EKAE+I + M + + N
Sbjct: 604 KGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEM-TLAGVSPNEH 662
Query: 509 SCNIILSAYLSSGDFVKA 526
+ I+ Y S GD KA
Sbjct: 663 TYTTIMHGYASLGDTGKA 680
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 2/168 (1%)
Query: 367 TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
T F+ + +A+ GE K+L++F M+ +V Y+ +I L + + E E ++
Sbjct: 591 TRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILD 650
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAG 485
E G+ P +Y + + Y +LG + F++ E + + Y L++ +G
Sbjct: 651 EMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSG 710
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++ A + M S Q I NT NI++ + GD +A + M
Sbjct: 711 RMQSALAVTKEM-SAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQM 757
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 171/410 (41%), Gaps = 36/410 (8%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L D + KE K + R + ++ +G +PS +T++ LI Y +G +D+A I +
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCK---EGMIDDAFEILDL 394
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M + P +N L L K + +A + + +L L Y+ LI
Sbjct: 395 M-ESNSCGPNTRTYNELICGLCKKRK------VHKAMALLNKMLERKLSPSLITYNSLI- 446
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
H D E L M + G + + KEG VE+A + +
Sbjct: 447 -HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSV--KAK 503
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEET 418
G+ +Y ++ Y K+G+ + + M L A +P Y+ +IE LCK ++
Sbjct: 504 GVKANEVIYTALIDGYCKVGKIDVAYSLLERM---LNDACLPNSYTYNVLIEGLCKEKKM 560
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIY 477
+ SL+ + + G+KP + +Y L L G D F+ + +P+ Y +
Sbjct: 561 KEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG------DFVKAEKIYD 531
L + + G +E+ +++ M+ ++ I + + +++ Y G DF+K + D
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMN-EEGILPDLVTYTVLIDGYARLGLTHRAFDFLKC--MVD 677
Query: 532 LMCLKKYEIESAWMEKLDYVLSLNR-KEVKKPVSLNLSSEQRENLIGLLL 580
C I S ++ L + NR KE + + ++ S E I L L
Sbjct: 678 TGCKPSLYIVSILIKNLSHE---NRMKETRSEIGIDSVSNTLEYEIALKL 724
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 118/270 (43%), Gaps = 20/270 (7%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
+DE ++Y ++L Q P+++ F A+V+ G + +AE ++ +GL
Sbjct: 175 IDEMKTVY---LELLNNQISPNIYT--FNAMVN--GYCKIGNVVEAELYASKIVQAGLHP 227
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
Y+ LI H +D L M Q G + + +++ + G + +A K
Sbjct: 228 DTFTYTSLILGHCRNKGVDNAYEVFLI--MPQKGCQRNEVSYTNLIHGLCEAGRINEALK 285
Query: 354 TWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+ + E DN PT + + A + G +++L +F EM+E+ +V Y +I+ L
Sbjct: 286 LFADMTE-DNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL 344
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-----KC 467
CK + + ++ E E G+ P + +Y L + Y GM D AF E L+ C
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDD---AF-EILDLMESNSC 400
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
PN Y + L + KA + N M
Sbjct: 401 GPNTRTYNELICGLCKKRKVHKAMALLNKM 430
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 120/293 (40%), Gaps = 19/293 (6%)
Query: 236 EACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQK 295
EAC+ Y +++ G P L N L R LV L + L A+ +F + + G +++
Sbjct: 99 EACAFYLQLLD-AGLPPEAKLFNVLMRDLVR----LGE--LASAQNVFDEMQSRG--VRR 149
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
+ S + D + L + M +AG ++++ + G +EDA +
Sbjct: 150 TVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVF 209
Query: 356 LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
++ F ++A+ K G+ LE+ REM+ER Y+ I+ LC+A
Sbjct: 210 EKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRA 269
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMY-----LNLGMHDRLHLAFSECLEKCRPN 470
+ + ++ E G++P +Y L + Y L++ M + ++ E +
Sbjct: 270 RDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVA----EGVGLD 325
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
Y + L AG AE + M NT + +++ A+ GD
Sbjct: 326 EVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNT-TYTMVIDAFCRKGDV 377
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 100/236 (42%), Gaps = 12/236 (5%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
R +F+ + +G P+ + F ILI A+ +G + ++ M + G +P +N+
Sbjct: 206 RGVFEKMCGRGMKPNAVVFTILIDAHCK---KGDAETMLELHREMRERG-VRPDAVTYNA 261
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
+ L L+ A I + ++GL Y+ LI + ++ +D +
Sbjct: 262 IVNGLCRA------RDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMA--MEI 313
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAK 379
K+ M G + +++ +K G DAE+ ++E+ + ++A+ +
Sbjct: 314 KQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCR 373
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
G+ L + +EMQ + V Y+ I+ CK + + + L+ + G+ P
Sbjct: 374 KGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSP 429
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 61/347 (17%), Positives = 130/347 (37%), Gaps = 44/347 (12%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
+ A +++FD++ ++G + ++F+ +I A G LD A +++ RM + G P
Sbjct: 131 ELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRA---GDLDGAETLHRRMSE-AGVTPDV 186
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI--- 311
+ +L + L ++ A +F + G++ +++ LI H + +
Sbjct: 187 YTYGALIQGLCRVG------RIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETM 240
Query: 312 ------------------------------DKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
D + S + EM+ AG +++
Sbjct: 241 LELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDG 300
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSAS 401
KE +++ A + ++ G+ + + +K G + + EM E
Sbjct: 301 YCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPD 360
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
Y +I+ C+ + + L+KE G KP + +Y + N + LG + +
Sbjct: 361 NTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLN 420
Query: 462 ECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
+ P+ Y I L+ G + EE+ + + +GV T
Sbjct: 421 AMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSAKGTVPDLGVYT 467
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 138/334 (41%), Gaps = 48/334 (14%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
IF + ++G P+ TF+ LI Y +A G +E + + M Q +P NSL
Sbjct: 163 IFRKMKDRGCKPTTSTFNTLIKGYGNA---GMPEECLKLLDLMSQEENVKPNDRTFNSLI 219
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
RA +K + +A + + + SGL Q D+ + +Y N + R +
Sbjct: 220 RAWCNK------KRITEAWNVVYKMAASGL--QPDVVTYNTLARAYAQNGETSRAEGMIL 271
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
EMQ + ++ KEG ++DA LR F+Y+M Y
Sbjct: 272 EMQNNRVMPNERTCGIIINGYCKEGKMKDA----LR------------FLYRMRNYG--- 312
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+L IF + + G + + E L +LM+EF G+KP + ++
Sbjct: 313 -VHPNLVIFNSLIK--GFLDITDTDGVDEAL----------TLMEEF---GVKPDVVTFS 356
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
+ N + ++G+ D+ F + ++ P+ + I + AG EKAE + M
Sbjct: 357 TIMNAWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAM-GK 415
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
+ N I+S + S+G A ++Y+ MC
Sbjct: 416 SGVQPNVVIFTTIISGWCSAGKMEYASRVYEKMC 449
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 22/175 (12%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
KC++IFDD++ G P F IL Y+ A G ++A S+ M + G QP +
Sbjct: 370 KCQEIFDDMVKAGIEPDIHAFSILAKGYVRA---GEPEKAESLLTAMGK-SGVQP----N 421
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
+F ++S G S ++ A ++ + G+ + LIW Y + + ++
Sbjct: 422 VVIFTTIIS--GWCSAGKMEYASRVYEKMCEMGICPNLKTFETLIW--GYGEAKEPQKAE 477
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRV-----CAKEG-----DVEDAEKTWLRLLESD 362
L + M+Q G K + V A E DVE+A K + E D
Sbjct: 478 ELLQIMEQKGVAPVKSTIQLVADAWHALGLANEAKRIKNDVEEAPKVMISTKEDD 532
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 134/315 (42%), Gaps = 25/315 (7%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM---IQ 246
MG+ K K I +++ +G P+E+T++ILI + C DE S R+ +Q
Sbjct: 203 MGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGF-------CKDENVSGAMRVFGEMQ 255
Query: 247 LGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHS 306
G +P +N L L S + +A + +++S LE ++ + + ++
Sbjct: 256 RQGLRPNVVTYNILINGLCSDG------KVDEAVALRDQMVSSDLE--PNVVTHNVLING 307
Query: 307 YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
+ N L +M++ G + +++ K+G +EDA + ++ D GI
Sbjct: 308 FCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMI--DRGIF 365
Query: 367 TPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
Y + + G+ + + EM + SA V Y+ +I+ LCK E+ L
Sbjct: 366 PEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKL 425
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLK 482
+ E E G+ P +Y L + Y G + R L +E+ + N + + ++
Sbjct: 426 LDEMFEKGLNPSHVTYNTLMDGYCREG-NLRAALIVRTRMERKGKQANVVTHNVLIKGFC 484
Query: 483 NAGNIEKAEEIFNHM 497
G +E A + N M
Sbjct: 485 LKGRLEDANGLLNEM 499
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 7/150 (4%)
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
++REM +R +V +++ ++ LCK + ++++ G+ P + +Y L + Y
Sbjct: 142 VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYC 201
Query: 449 NLGMHDRLHLA---FSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
+G +++ A E + K C PN Y I ++ N+ A +F M Q +
Sbjct: 202 KMGRIGKMYKADAILKEMVAKGIC-PNEVTYNILIDGFCKDENVSGAMRVFGEMQR-QGL 259
Query: 504 GVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
N + NI+++ S G +A + D M
Sbjct: 260 RPNVVTYNILINGLCSDGKVDEAVALRDQM 289
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 159/374 (42%), Gaps = 32/374 (8%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
G+R + W +Q YR + + + +GK R+F + +++ + P +T + I
Sbjct: 124 GYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKEN--PYMLTPEVFI 181
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
V + +A + + M + G +P + L AL K G + ++A +
Sbjct: 182 VLMRRFASVRMVKKAVEVLDEMPKYG-CEPDEYVFGCLLDALC-KNGSV-----KEAASL 234
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
F ++ ++ L++ + I + + L+ ++++AGFE V ++L
Sbjct: 235 FEDMRVR-FNPNLRHFTSLLYGWCREGKIMEAKHVLV--QIKEAGFEPDIVVYNNLLGGY 291
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
A+ G + DA + + + G +F ++++ K + +++ IF EMQ A V
Sbjct: 292 AQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADV 351
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
Y +I CK T+ ++ + ++ G P SY+ + + H++ E
Sbjct: 352 VTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCI------MMAHEKKE-ELEE 404
Query: 463 CLE--------KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
C+E C P+ IY + + G++++A ++ M Q G+N IL
Sbjct: 405 CMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEM---QAGGLNPGLDTYIL 461
Query: 515 --SAYLSSGDFVKA 526
+LS G V+A
Sbjct: 462 MVHGFLSQGCLVEA 475
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 144/363 (39%), Gaps = 37/363 (10%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+++ D T L D + K + + + + + + ++ P+ +T+ LI
Sbjct: 208 MRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKT-- 265
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQ--------AEFI 282
G + +A ++ RMI + G +P +NSL G S L + + I
Sbjct: 266 -GQVRDAQEVFKRMI-VRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDII 323
Query: 283 FHNLLTSGLE-------------------IQKDI--YSGLIWLHSYQDNIDKERISLLKK 321
+N L GL D+ YS LI + ID R +L
Sbjct: 324 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR-TLFDD 382
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
++QA + V C G V+DAE+ ++ SD + ++ + K+G
Sbjct: 383 MLKQAVLPDVVTFSTLVEGYC-NAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVG 441
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+++ + + M +R +V Y +I+ C+A + + L++E V G++P + +Y
Sbjct: 442 RMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYR 501
Query: 442 NLTNMYLNLG--MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+L + G R L E E C+ + Y + ++ L G + A E+ +
Sbjct: 502 SLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQ 561
Query: 500 DQT 502
T
Sbjct: 562 SGT 564
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/161 (19%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ + K+ + ++ + +EM+E + +V Y +I C+ + + L ++ VE G
Sbjct: 49 INGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGC 108
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEE 492
P + +Y L + G+ D + E E+ +P++ Y + L G I+ A +
Sbjct: 109 MPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALK 168
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+F +S+ + + + +++ +G +A K+++ M
Sbjct: 169 VFED-NSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKM 208
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 77/399 (19%), Positives = 150/399 (37%), Gaps = 89/399 (22%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYN- 242
T + D + K + + F + +G VP+E T+++LI + C ++
Sbjct: 11 TIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGF------------CKVHKV 58
Query: 243 -------RMIQLGGYQPRPSLHNSLFRALV--SKPGGLSKYYLQQAE------FIFHNLL 287
+ ++ G P ++++ +K K + Q E + +N L
Sbjct: 59 HRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTL 118
Query: 288 TSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK---EVLLS------- 337
SGL +GL+ +Y+ L EM++ G + K + L++
Sbjct: 119 LSGL-----CRNGLMD-EAYE----------LLDEMRERGLQPDKFSYDTLMAGLCKTGK 162
Query: 338 ---VLRV--------C--------------AKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
L+V C K G +++A K + ++ E+ F
Sbjct: 163 IDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTA 222
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
M+ K ++ ++ M++R + +V Y +I+ LCK + + + K + G
Sbjct: 223 LMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG 282
Query: 433 MKPLMPSYINLTNMY-LNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAE 491
++P + +Y +L + + + G+ L L C P+ Y ++ L G +A
Sbjct: 283 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEAN 342
Query: 492 EIFNHMHSD-QTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
+F M + V T SC I G F K E+I
Sbjct: 343 RLFGDMKAKFCNPDVITYSCLI--------GGFCKLERI 373
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 132/319 (41%), Gaps = 25/319 (7%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM- 244
+ D K K K + +++ + P+E+TF+ILI + C DE + ++
Sbjct: 270 IIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGF-------CRDENVTAAKKVF 322
Query: 245 --IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
+Q G QP +NSL L S L +A + + GL+ Y+ LI
Sbjct: 323 EEMQRQGLQPNVVTYNSLINGLCSNG------KLDEALGLQDKMSGMGLKPNVVTYNALI 376
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+ + + R L ++ + G +++ K G ++DA LR + D
Sbjct: 377 NGFCKKKMLKEAREML--DDIGKRGLAPNVITFNTLIDAYGKAGRMDDA--FLLRSMMLD 432
Query: 363 NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
G+ Y + + + G ++ ++ +EM+ A + Y+ +++ LCK ET
Sbjct: 433 TGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRK 492
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYL 478
L+ E E G+ P +Y L + Y G + L +EK R N Y + +
Sbjct: 493 AVRLLDEMFEVGLNPSHLTYNALIDGYFREG-NSTAALNVRTLMEKKGRRANIVTYNVLI 551
Query: 479 ESLKNAGNIEKAEEIFNHM 497
+ N G +E+A + N M
Sbjct: 552 KGFCNKGKLEEANRLLNEM 570
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 76/191 (39%), Gaps = 35/191 (18%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
KEG + E + ++ G+ F + K+G+F K+ ++ +M+ S SV
Sbjct: 205 VKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSV 264
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
Y+ II+ CKA + ++L+KE V R+H
Sbjct: 265 ITYNTIIDGYCKAGKMFKADALLKEMVA-----------------------KRIH----- 296
Query: 463 CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
PN + I ++ N+ A+++F M Q + N + N +++ S+G
Sbjct: 297 ------PNEITFNILIDGFCRDENVTAAKKVFEEMQR-QGLQPNVVTYNSLINGLCSNGK 349
Query: 523 FVKAEKIYDLM 533
+A + D M
Sbjct: 350 LDEALGLQDKM 360
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/446 (20%), Positives = 169/446 (37%), Gaps = 62/446 (13%)
Query: 131 LVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
R+L A + T+L C R +E + M + F+ T +
Sbjct: 188 FARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLC 247
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
G R + G P +++ ++I ++G + +AC+++N M+Q G
Sbjct: 248 GGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLF---MEGEISKACNLFNEMVQ-KGV 303
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
P +NS+ AL + +AE + + + ++ + Y+ +I H Y
Sbjct: 304 VPNVVTYNSIVHALCKARA------MDKAELVLRQMFDNSIQPDEVTYTAMI--HGYSCL 355
Query: 311 IDKERISLLKKEMQQAGF--------------------EEGKEVLLSV------------ 338
+ + + KEM + G +E E+ S+
Sbjct: 356 GRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISY 415
Query: 339 ---LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREM 393
L A EG D + + +DNGI + + + A+AK G ++L IF EM
Sbjct: 416 SILLHGYATEGRFVDMNNLFHSM--TDNGIVADSHCFNILINAHAKRGMMDEALLIFTEM 473
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
+ + S +V Y +I LC+ + + + G+KP Y +L + G
Sbjct: 474 RGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDL 533
Query: 454 DRLHLAFSECLEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTR--- 508
+ SE +++ RPN T + + SL N G + A+++FN I + R
Sbjct: 534 IKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFN-----LVIHIGDRPDI 588
Query: 509 -SCNIILSAYLSSGDFVKAEKIYDLM 533
+ N ++ Y G KA + D M
Sbjct: 589 FTFNSLIDGYCLVGKMDKAFGVLDAM 614
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 77/391 (19%), Positives = 156/391 (39%), Gaps = 22/391 (5%)
Query: 145 EDGTYLAVHCMRIRENETGFR--------VYEWMMQQHWYRFDFALATKLADYMGKERKF 196
++G HC I N R ++ M Q AT +A + + +
Sbjct: 440 DNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIA-ALCRMGRL 498
Query: 197 AKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSL 256
A + +I+ G P+ + +H LI + + G L +A + + M+ G +P +
Sbjct: 499 ADAMEKLSQMISIGLKPNTVVYHSLIQGFCT---HGDLIKAKELVSEMMDQGIPRPNITF 555
Query: 257 HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERI 316
+S+ +L ++ + A+ +F+ ++ G ++ LI + +DK
Sbjct: 556 FSSIIHSLCNEG------RVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFG 609
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEA 376
L M AG E +++ K G ++D + +L T + ++
Sbjct: 610 VL--DAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDG 667
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
+ G + ++F EM E + S+ Y I++ LC+ T+ +L + +K
Sbjct: 668 LFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFE 727
Query: 437 MPSYINLTNMYLNLGMHDRLHLAF-SECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
+ + + + + H F S PN + YG+ + +L G++E+A+ +F+
Sbjct: 728 IAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFS 787
Query: 496 HMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
M ++R N I+ L G+ VKA
Sbjct: 788 SMEKTGC-APSSRLLNDIIRMLLQKGEIVKA 817
>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 367
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 157/353 (44%), Gaps = 17/353 (4%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T + +G+ + R++FD++++ G +F+ +I AY +G +A +Y
Sbjct: 14 TLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYAR---KGLFKKAWRMYED 70
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M++ G Q ++L + G ++ ++ AE IF + +G+ + + Y+ L+
Sbjct: 71 MVE-SGIQADEITLSTLLSGV-----GKTQLPVETAEKIFSKIKENGILPRVETYNTLLS 124
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ S + ER L+ EMQ+ ++L + + G +++A + + R+L D
Sbjct: 125 VLSRGGH--TERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRIL--DA 180
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
G+ Y ++ Y + + +++E+F EM+ + Y +I + KA E
Sbjct: 181 GLKPTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEA 240
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLES 480
+ ++ G P + ++ L + G + F+E L C P+ T+Y + + +
Sbjct: 241 ALVFRQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGA 300
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G+ +A +F M + Q I N S + ++ AY S A+ + D M
Sbjct: 301 YGRYGHSVQAAILFRRMQA-QGISPNAVSYDTMIQAYCHSKQAADAQIVLDQM 352
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 121/307 (39%), Gaps = 49/307 (15%)
Query: 165 RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
R+YE M++ + L+T L+ + IF I G +P T++ L
Sbjct: 66 RMYEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTL--- 122
Query: 225 YLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
LS +G E C +Q P N+L ++ GG L++A ++
Sbjct: 123 -LSVLSRGGHTERCKELEIEMQRLEVVPNIITFNTLL--MMHVQGG----RLKEAAEVYQ 175
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
+L +GL+ Y+GL+ ++ KE I + EM++ G + + ++ V K
Sbjct: 176 RILDAGLKPTVVTYTGLVQMYCRASK-HKEAIEVFL-EMRRVGCKPDLMIYSLMISVYGK 233
Query: 345 EGDVEDAEKTWLRLLESDNGIPT--------PAFVYK----------------------- 373
G E+A + R L++D IP AF ++
Sbjct: 234 AGSAEEAALVF-RQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLT 292
Query: 374 -----MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
M AY + G +++ +FR MQ + S + +Y +I+ C +++ + ++ +
Sbjct: 293 LYNVMMGAYGRYGHSVQAAILFRRMQAQGISPNAVSYDTMIQAYCHSKQAADAQIVLDQM 352
Query: 429 VETGMKP 435
G P
Sbjct: 353 TRAGFSP 359
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 158/374 (42%), Gaps = 28/374 (7%)
Query: 133 RILNAQKKW-LRQEDGTYLAV---HCMRIRENETGFRVYEWMMQQHWYRFDFALATKLAD 188
R L KW LR TY + H +R RE GF+VYE M ++ Y+ D L D
Sbjct: 114 RCLELASKWGLRLSGYTYKCIVQAH-LRSREVSKGFQVYEEM-RRKGYKLDIFAYNMLLD 171
Query: 189 YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG 248
+ K + +F+D+ + VP T+ ILI A G + S ++ M+ G
Sbjct: 172 ALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKA---GRTSKFLSFFDEMVSKG 228
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
+ N++ AL G +K + + F+ ++ + + + YS + + + +
Sbjct: 229 CVLNLIAF-NTIIEAL-----GKNKM-VDKVIFVLSKMVENDCQPNQFTYSITLDILATE 281
Query: 309 DNIDK--ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
+ + E + + + M ++ + +++ K G +A + R+ S
Sbjct: 282 GQLHRLNEVLDICSRFMNRSIYS-------YLVKSLCKSGHASEAHNVFCRMWNSHEKGD 334
Query: 367 TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
AFV +E + ++++++ M E+ V Y+ + L K ++ +L
Sbjct: 335 RDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFD 394
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE--KCRPNRTIYGIYLESLKNA 484
+ G+ P + +Y + + Y +G+ D+ F E +E C+P+ Y + L
Sbjct: 395 KMKTNGIIPDVFTYNIMISSYGRVGLVDKASELF-EVMEASSCKPDVVTYNSLINCLGKH 453
Query: 485 GNIEKAEEIFNHMH 498
G++++A +F M
Sbjct: 454 GDLDEAHMLFKEMQ 467
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
Query: 363 NGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
NGI F Y + +Y ++G K+ E+F M+ V Y+ +I L K + +
Sbjct: 399 NGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDE 458
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECL-EKCRPNRTIYGI 476
L KE E G P + +Y L + G +++ +A F E + E C PN Y I
Sbjct: 459 AHMLFKEMQEKGYDPDVFTYSILIECF---GKSNKVEMACSLFDEMISEGCTPNIVTYNI 515
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTI 503
L+ L+ G E+A +++ M I
Sbjct: 516 LLDCLERRGKTEEAHKLYETMKQQGLI 542
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 122/286 (42%), Gaps = 15/286 (5%)
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
G +P ++N + AL LS+ + +++N+ + GLE ++++ + L +
Sbjct: 139 GCEPSVKIYNLVLDAL------LSQNLFKMINALYNNMKSEGLE--PNVFTYNVLLKALC 190
Query: 309 DNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
N + L EM G + +V+ K GDV+ A + ++ P
Sbjct: 191 QNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPV-----VP 245
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
+ + K F ++ ++ EM +R +V +Y +I L EL+ ++
Sbjct: 246 VYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRM 305
Query: 429 VETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNI 487
G +P + ++ +L + G + D + L E PN Y + L + GN+
Sbjct: 306 FVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNM 365
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++A ++N M D +I N + + I+ + SGD V A + ++ M
Sbjct: 366 DEAISVWNQMEKD-SIRPNVTTYSTIIYGFAKSGDLVSACETWNKM 410
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 114/249 (45%), Gaps = 12/249 (4%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
KE +F + D+ ++++++G P+ +++ +++ LS G ++ + +++ RM G
Sbjct: 256 KECRFKEAFDLMNEMVDRGVDPNVISYST-VISCLSD--MGNVELSLAVFGRMFVRGC-- 310
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
RP++ F +L+ G + + A +++ ++ G+ Y+ LI N+
Sbjct: 311 -RPNVQT--FTSLIK--GFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNM 365
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
D E IS+ +M++ +++ AK GD+ A +TW +++ +
Sbjct: 366 D-EAISVWN-QMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYT 423
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
++ ++ F ++ ++ M +V ++ I+ LC+A E +++ + +
Sbjct: 424 CMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKY 483
Query: 432 GMKPLMPSY 440
P + +Y
Sbjct: 484 ECLPNIRTY 492
>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 957
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 158/374 (42%), Gaps = 43/374 (11%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T +A + + A+ +FD + +G + + MT++ L+ ++ G +++A +YN
Sbjct: 356 TSMAKVRAEAGRHAEALKLFDVMAEKGLLTTRMTWNTLLHCFVRI---GDVEQATKVYND 412
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY-----LQQAEFIFHNLLTSGLEIQKDIY 298
M++ G A V G + Y ++ AE + + SG++ + IY
Sbjct: 413 MVEAGS-------------ANVVTYGNMINLYSKFQMVEDAENLLAEMRESGVKPDEYIY 459
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEE------------------GKEVLLSVLR 340
+ L+ D IDK +++ +EM+ G E ++L +L
Sbjct: 460 GSFVKLYCNSDMIDKA--TMVVQEMKDDGLESVCNEREMFPLGQALQSPIDTQILNQLLI 517
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
A+ G++ +AE +L+E+ I A V + Y + G F K+ +F +Q++
Sbjct: 518 KRAEAGELREAELLLDKLVEAGGCIVDTAAVLMINLYGRRGLFQKAKSLFNSLQKKDHPP 577
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLA 459
S+ Y+ +I+L +E E + E G + L + Y G D L
Sbjct: 578 SLYVYNTMIKLCAVCKELEEAIFVFDRMEENGRMFDAVTVSILVHAYTKEGRFKDAAGLM 637
Query: 460 FSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
+ Y L++ +GN++ A E++ M + I + ++ I++S +
Sbjct: 638 KRAKKVGVAMDTVAYNTSLKANLKSGNLKGALEVYGEMQ-EADIEPSAKTYTILISLFSK 696
Query: 520 SGDFVKAEKIYDLM 533
GD +A + ++++
Sbjct: 697 LGDLGRAVQAFEVL 710
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 129/315 (40%), Gaps = 23/315 (7%)
Query: 232 GCLDEACSIYNRMIQLGG----YQPRPSLHNSLFRALVSKPGGLSKYY-----------L 276
GC+ + ++ MI L G +Q SL NSL + P L Y L
Sbjct: 540 GCIVDTAAVL--MINLYGRRGLFQKAKSLFNSLQKK--DHPPSLYVYNTMIKLCAVCKEL 595
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
++A F+F + +G D + I +H+Y + + L K ++ G
Sbjct: 596 EEAIFVFDRMEENGRMF--DAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYN 653
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
+ L+ K G+++ A + + + E+D + + ++K+G+ ++++ F +
Sbjct: 654 TSLKANLKSGNLKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSS 713
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
A AY ++I A + L +E G KP Y NL + + G+
Sbjct: 714 EVGADEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEA 773
Query: 457 HLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILS 515
L S+ K C P+ Y + + + + G AE + H+ D+ + + R N ++
Sbjct: 774 RLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKPADAESLL-HLMQDRGLYPDCRHYNEVIR 832
Query: 516 AYLSSGDFVKAEKIY 530
AY + G A +I+
Sbjct: 833 AYGNVGKLSDACRIF 847
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 153/355 (43%), Gaps = 65/355 (18%)
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G ++A + M + G+ P L+N++ AL G L +Y Q++E ++ ++ G
Sbjct: 225 EGRTEDAVHTFKDM-RAAGHLPDELLYNTIICAL----GKLGRY--QESEALYLDMKKQG 277
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ K Y+ +I + S +L EMQ++G + V S++ + K G E+
Sbjct: 278 IVPSKFTYTIMINVWSKAGRFASAAETL--AEMQRSGCIADEVVYCSIINMYGKAGLYEE 335
Query: 351 AEKTW-------------------------------LRLLE--SDNGIPTPAFVYK--ME 375
AEK + L+L + ++ G+ T + +
Sbjct: 336 AEKIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLFDVMAEKGLLTTRMTWNTLLH 395
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ +IG+ ++ +++ +M E GSA+V Y +I L K + E E+L+ E E+G+KP
Sbjct: 396 CFVRIGDVEQATKVYNDMVEA-GSANVVTYGNMINLYSKFQMVEDAENLLAEMRESGVKP 454
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSEC----LEKCRPNRTIY--GIYLES--------- 480
Y + +Y N M D+ + E LE R ++ G L+S
Sbjct: 455 DEYIYGSFVKLYCNSDMIDKATMVVQEMKDDGLESVCNEREMFPLGQALQSPIDTQILNQ 514
Query: 481 ----LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
AG + +AE + + + V+T + ++++ Y G F KA+ +++
Sbjct: 515 LLIKRAEAGELREAELLLDKLVEAGGCIVDTAAV-LMINLYGRRGLFQKAKSLFN 568
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 135/316 (42%), Gaps = 19/316 (6%)
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM-IQLGG 249
+ +F R + D + ++G P ++F+ LI A + GCL ++ ++ G
Sbjct: 232 ARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKS---GCLAAGVALDLLFEVRQSG 288
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI--YSGLIWLHSY 307
+P +N+L A L+ A +F +++ S E + D+ Y+ ++ +H
Sbjct: 289 LRPDVITYNTLISACSQSSN------LEDAVTVFEDMIAS--ECRPDLWTYNAMVSVHGR 340
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
E L +E+ + GF S+L AKEG+V+ E T +L+++
Sbjct: 341 CGK--AEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNE 398
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
+ + Y K+G ++ ++ EM+ + Y +I+ L K ++++
Sbjct: 399 ITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLED 458
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL--EKCRPNRTIYGIYLESLKNAG 485
+ G+KP + ++ L Y G F +C+ +P+R Y + L+ +G
Sbjct: 459 MTDAGLKPTLIAFSALICAYAKGGRRADAENTF-DCMIASGVKPDRLAYLVMLDVFARSG 517
Query: 486 NIEKAEEIFNHMHSDQ 501
+ EK ++ M +D
Sbjct: 518 DTEKMLCLYRKMMNDN 533
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 142/318 (44%), Gaps = 20/318 (6%)
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH--NSLFRALVSKPGGLSKYY 275
++ LI AY + G ++A ++++ MI+ G P P++ N + RAL+ G L + Y
Sbjct: 783 WNALIHAYAES---GLYEKARAVFDNMIKTG---PLPTVDSVNGMMRALIVD-GRLDELY 835
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+ + L +I K L+ L ++ D + + M+ AG+ +
Sbjct: 836 V-----VVEELQDMNFKISKSTV--LLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLY 888
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM-EAYAKIGEFMKSLEIFREMQ 394
S++ + D E + +E P A + + Y G F ++ +++R +
Sbjct: 889 RSMISLLCHHNRFRDVE-LMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSIL 947
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
E Y+ +I + C++ E +L+ E + G+ P + SY +L + +
Sbjct: 948 EAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELRE 1007
Query: 455 RLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
+ F E K + NR+IY + ++ +NAGN KAE + M D I + +I+
Sbjct: 1008 QADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKED-GIEPTIATMHIL 1066
Query: 514 LSAYLSSGDFVKAEKIYD 531
+++Y ++G +AE + +
Sbjct: 1067 MTSYGTAGQPREAENVLN 1084
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/340 (18%), Positives = 149/340 (43%), Gaps = 18/340 (5%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
D+ ++ G P +T++ LI A L++A +++ MI + RP L
Sbjct: 279 DLLFEVRQSGLRPDVITYNTLISA---CSQSSNLEDAVTVFEDMI---ASECRPDLWT-- 330
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
+ A+VS G K ++AE +F L+ G Y+ L++ + + N+DK +
Sbjct: 331 YNAMVSVHGRCGKA--EEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDK--VEHTC 386
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
+++ +AGF++ + +++ + K G ++ A + + + +++ K+
Sbjct: 387 EQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKM 446
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
++ ++ +M + ++ A+ +I K E+ + +G+KP +Y
Sbjct: 447 NRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAY 506
Query: 441 INLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+ + +++ G +++ + + + + RP+ +Y + L +L E+ EE+ M
Sbjct: 507 LVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMEL 566
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
+ + S +I + +S G K+ CL+ Y+
Sbjct: 567 LCRMNLGIISTMLIKARCVSQG-----AKLLKKACLQGYK 601
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 116/293 (39%), Gaps = 40/293 (13%)
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
QQAE + L + I + I++ LI H+Y ++ E+ + M + G + +
Sbjct: 763 QQAEILVKGLRQAS-GIDRRIWNALI--HAYAESGLYEKARAVFDNMIKTGPLPTVDSVN 819
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
++R +G +++ L + + I + ++A+AK G+ + ++I+ M+
Sbjct: 820 GMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAA 879
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
++ Y +I LLC E ++ E G KP + L NMY G DR
Sbjct: 880 GYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRT 939
Query: 457 HLAFSECLEK----------------CR--------------------PNRTIYGIYLES 480
+ LE CR P Y L +
Sbjct: 940 TQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAA 999
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A E+A++IF M S ++ +N ++++ Y ++G+ KAE + +M
Sbjct: 1000 SAKAELREQADQIFEEMRS-KSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVM 1051
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 96/236 (40%), Gaps = 19/236 (8%)
Query: 164 FRVYEWM---MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
FR E M M+ ++ D A+ L + F + ++ I+ G P E T++
Sbjct: 901 FRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNT 960
Query: 221 LIVAYLSA--PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQ 278
LIV Y + P +E ++ N M + G P+ + SL A S L +Q
Sbjct: 961 LIVMYCRSFRP-----EEGFTLLNEMGK-RGLTPKLQSYKSLLAA--SAKAELR----EQ 1008
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
A+ IF + + ++ + IY ++ + Y++ + + L M++ G E + +
Sbjct: 1009 ADQIFEEMRSKSYQLNRSIYHMMMKI--YRNAGNHSKAENLLAVMKEDGIEPTIATMHIL 1066
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
+ G +AE L S + T + +AY K G++ EM+
Sbjct: 1067 MTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMK 1122
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 158/374 (42%), Gaps = 28/374 (7%)
Query: 133 RILNAQKKW-LRQEDGTYLAV---HCMRIRENETGFRVYEWMMQQHWYRFDFALATKLAD 188
R L KW LR TY + H +R RE GF+VYE M ++ Y+ D L D
Sbjct: 114 RCLELASKWGLRLSGYTYKCIVQAH-LRSREVSKGFQVYEEM-RRKGYKLDIFAYNMLLD 171
Query: 189 YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG 248
+ K + +F+D+ + VP T+ ILI A G + S ++ M+ G
Sbjct: 172 ALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKA---GRTSKFLSFFDEMVSKG 228
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
+ N++ AL G +K + + F+ ++ + + + YS + + + +
Sbjct: 229 CVLNLIAF-NTIIEAL-----GKNKM-VDKVIFVLSKMVENDCQPNQFTYSITLDILATE 281
Query: 309 DNIDK--ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
+ + E + + + M ++ + +++ K G +A + R+ S
Sbjct: 282 GQLHRLNEVLDICSRFMNRSIYS-------YLVKSLCKSGHASEAHNVFCRMWNSHEKGD 334
Query: 367 TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
AFV +E + ++++++ M E+ V Y+ + L K ++ +L
Sbjct: 335 RDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFD 394
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE--KCRPNRTIYGIYLESLKNA 484
+ G+ P + +Y + + Y +G+ D+ F E +E C+P+ Y + L
Sbjct: 395 KMKTNGIIPDVFTYNIMISSYGRVGLVDKASELF-EVMEASSCKPDVVTYNSLINCLGKH 453
Query: 485 GNIEKAEEIFNHMH 498
G++++A +F M
Sbjct: 454 GDLDEAHMLFKEMQ 467
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
Query: 363 NGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
NGI F Y + +Y ++G K+ E+F M+ V Y+ +I L K + +
Sbjct: 399 NGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDE 458
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECL-EKCRPNRTIYGI 476
L KE E G P + +Y L + G +++ +A F E + E C PN Y I
Sbjct: 459 AHMLFKEMQEKGYDPDVFTYSILIECF---GKSNKVEMACSLFDEMISEGCTPNIVTYNI 515
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTI 503
L+ L+ G E+A +++ M I
Sbjct: 516 LLDCLERRGKTEEAHKLYETMKQQGLI 542
>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
Length = 689
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAK 379
+M +AG V ++L VC K GD AE R+ + G+P F + + Y +
Sbjct: 262 QMTRAGVAMNTHVYNAMLHVCLKAGDAALAESLMTRMDAA--GVPLDRFSFNTVIALYCR 319
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
G +++ + M+ + A V ++ +I LCK + L++E G+ P +
Sbjct: 320 KGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVT 379
Query: 440 YINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
Y L + Y G + + + L P Y L L G +++ + N M
Sbjct: 380 YTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEM- 438
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
++ + + +CN +++AY GD A K+
Sbjct: 439 DERKVQADHVTCNTLINAYCKRGDMTSALKV 469
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 145/398 (36%), Gaps = 43/398 (10%)
Query: 158 RENETGFRVYEWM------MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGR 211
R T +V++ M M H Y + K D E + ++
Sbjct: 251 RMTATARKVFDQMTRAGVAMNTHVYNAMLHVCLKAGDAALAESLMTR--------MDAAG 302
Query: 212 VP-SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGG 270
VP +F+ +I Y +Q EA + RM + G + NSL L +
Sbjct: 303 VPLDRFSFNTVIALYCRKGMQ---YEAMCVRERM-ENQGVKADVVTWNSLIHGLCKE--- 355
Query: 271 LSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE 330
+++A + + +G+ Y+ L+ Y D E L+ EM+ G
Sbjct: 356 ---RRVKEASQLLREMAMAGVAPDHVTYTTLV--DGYCRAGDLEEAVKLRGEMEAMGMLP 410
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIF 390
G ++LR ++G +++ + E + AY K G+ +L++
Sbjct: 411 GVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVK 470
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP-------LMPSYINL 443
R M E Y ++ CKA+E + + + E + G P ++ N
Sbjct: 471 RRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNK 530
Query: 444 TNMYLNLGMHDRL-HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQT 502
N L + D L F P++ +Y + L G I+ A +FN M +
Sbjct: 531 NNAVAVLAIPDELMKRGFP-------PDKAVYRSLIRRLCKKGFIDLAGNVFNEMQG-KG 582
Query: 503 IGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEI 540
+ + + AYL++G V A I + M K+ I
Sbjct: 583 LEADCLVYATLACAYLTAGKPVAALDILNEMAKKQLYI 620
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 149/370 (40%), Gaps = 43/370 (11%)
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY----LSAPVQGC------------- 233
G KF + +FDD+ + G VP +T++ L+ + L + V G
Sbjct: 400 GVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPER 459
Query: 234 ---------------LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQ 278
D++ IY RMI+ G Y P S +N++ AL GG +Q
Sbjct: 460 DTYVSLISSYSRCGLFDQSMEIYKRMIEAGIY-PDISTYNAVLSALAR--GG----RWEQ 512
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
AE +F + L+ + D S LH+Y + +++ L +++ E ++ ++
Sbjct: 513 AEKLFAEM--ENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTL 570
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
+ V +K ++ + EK +L L + + Y K K EI M+
Sbjct: 571 VLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSI 630
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
+ S Y+ ++ + + + E E+++ E +G +P SY + Y G
Sbjct: 631 NLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASR 690
Query: 459 AFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
FSE P+ Y I+++S E+A ++ +M + + N R+ N IL Y
Sbjct: 691 LFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVT-RGCKPNERTYNSILQEY 749
Query: 518 LSSGDFVKAE 527
G A+
Sbjct: 750 CRHGKIADAK 759
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 156/391 (39%), Gaps = 43/391 (10%)
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS 255
+ + +FD++ G P ++TF+ L+ Y A + DEA + M +LGG P
Sbjct: 265 YKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMH---DEAIGVLKEM-ELGGCPPSVV 320
Query: 256 LHNSLFRALVSKPGGLSKYYLQ----------QAEFIFHNLLTSGLEIQKDI-------- 297
+NSL + V GL K + Q + I + L SGL+ I
Sbjct: 321 TYNSLISSYVKD--GLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYD 378
Query: 298 -------------YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
Y+ LI LH + E +++ +++ AGF ++L V +
Sbjct: 379 EMLRNGCKPNLCTYNALIKLHGVRGKF-PEMMAVF-DDLRSAGFVPDVVTWNTLLAVFGQ 436
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
G + + + +S +V + +Y++ G F +S+EI++ M E +
Sbjct: 437 NGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDIST 496
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
Y+ ++ L + E E L E +P SY +L + Y N D++ A SE +
Sbjct: 497 YNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMK-ALSEDI 555
Query: 465 --EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
EK + + + N+ + E+ F + + ++ N ++S Y +
Sbjct: 556 YAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLEL-GRRRCSLDINVLNAMVSVYGKNRM 614
Query: 523 FVKAEKIYDLMCLKKYEIESAWMEKLDYVLS 553
K E+I LM + +A L ++ S
Sbjct: 615 VKKVEEILSLMKGSSINLSTATYNSLMHMYS 645
>gi|242091782|ref|XP_002436381.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
gi|241914604|gb|EER87748.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
Length = 546
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 156/360 (43%), Gaps = 46/360 (12%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D++ G VP +T+ ++ AY + +G L+ A +++ ++ G +P +++ L
Sbjct: 226 VLDEMTGWGIVPDVVTYTTVLTAYCA---KGDLEGAQQLFDDIVA-SGRRPDATMYTVLV 281
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL--- 318
G + LQ A I + +G++ + YS +I + KE S+
Sbjct: 282 D------GYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVI------EACCKEGKSIEAC 329
Query: 319 -LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
L +EM AG+ + V+ V ++G +A + W ++++ +P V Y
Sbjct: 330 DLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEIWRQMVK--KSVPPDNTVVSTLIY 387
Query: 378 --AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
K G ++ +F E+ ER S+ Y+ +I LC+ E + + + VE +P
Sbjct: 388 WLCKNGMVQEARGLFDEL-ERGFVPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEP 446
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+Y L + +G + + F E + K C P++ +Y ++SL +
Sbjct: 447 NAMTYEALIKGFCKIGKSNEGYALFKEMVAKGCTPSKFLYQALVDSLSEPSH-------- 498
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSL 554
D T+ I+ + LS DF+ + ++++ K + W +KLD VL++
Sbjct: 499 -----DDTVW------TIVEAVALSGQDFLDGQ-LWEIFIRKVVDTNETWKKKLDLVLNM 546
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 120/317 (37%), Gaps = 32/317 (10%)
Query: 245 IQLGGYQPRPSLH--NSLFRALVSKPGGL----------SKYYLQQAEFIFHNLLTSGLE 292
+ L + RPS N+L +LVS +K Y+ + N+L GL
Sbjct: 157 LSLPSFNSRPSTRSFNALLHSLVSARRLRLAAALFRAAPTKLYITP-NLVSCNILLKGLV 215
Query: 293 IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
D+ + L L EM G +VL +GD+E A+
Sbjct: 216 GMGDLDAALKVLD----------------EMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQ 259
Query: 353 KTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+ + ++ S + ++ Y G+ + I EM+ + Y +IE
Sbjct: 260 QLFDDIVASGRRPDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEAC 319
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNR 471
CK ++ L +E + G P P + ++ G + + + ++K P+
Sbjct: 320 CKEGKSIEACDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDN 379
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
T+ + L G +++A +F+ + + T + II +G+ +A +++D
Sbjct: 380 TVVSTLIYWLCKNGMVQEARGLFDELERGFVPSLLTYNSLII--GLCENGELQEAGRVWD 437
Query: 532 LMCLKKYEIESAWMEKL 548
M ++YE + E L
Sbjct: 438 DMVERRYEPNAMTYEAL 454
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 169/377 (44%), Gaps = 52/377 (13%)
Query: 157 IRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEM 216
+ ++E +V+E M ++H R +++ T + MG+ K+ + +F+++I +G + +
Sbjct: 248 LAKDEKACQVFEDMKKRHCRRDEYSY-TIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVV 306
Query: 217 TFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN-SLFRALVSKPGGL---- 271
++ L+ + +D+A +++RM++ G RP+ + SL L+ G L
Sbjct: 307 GYNTLMQVLAKGKM---VDKAIQVFSRMVETGC---RPNEYTYSLVLNLLVAEGQLVRLD 360
Query: 272 -----SKYYLQQ------------------AEFIFHNLLTSGLEIQKDIYSGLI-WLHSY 307
SK Y+ Q A +F ++ + ++ ++D Y ++ L
Sbjct: 361 GIVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGA 420
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
I E I +L K + + G + +V K + + ++ + P+
Sbjct: 421 GKTI--EAIEMLSK-IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDG---PS 474
Query: 368 P-AFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
P F Y + ++ ++GE +++ IF E++ + +Y+ +I L K + +
Sbjct: 475 PDIFTYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVR 534
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS---ECLEK-CRPNRTIYGIYLES 480
KE E G+ P + +Y L + G +R+ +A+S E L K C+PN Y I L+
Sbjct: 535 FKEMQEKGLNPDVVTYSTLMECF---GKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDC 591
Query: 481 LKNAGNIEKAEEIFNHM 497
L+ +G +A +++ M
Sbjct: 592 LEKSGRTAEAVDLYTKM 608
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
++ + +IG++ +++ +F EM + +V Y+ ++++L K + + +
Sbjct: 272 SYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRM 331
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIE 488
VETG +P +Y + N+ + G RL + K + IY + +L G++
Sbjct: 332 VETGCRPNEYTYSLVLNLLVAEGQLVRLDGIVE--ISKRYMTQGIYSYLVRTLSKLGHVS 389
Query: 489 KAEEIFNHMHS 499
+A +F M S
Sbjct: 390 EAHRLFCDMWS 400
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 155/374 (41%), Gaps = 28/374 (7%)
Query: 133 RILNAQKKW-LRQEDGTYLAV---HCMRIRENETGFRVYEWMMQQHWYRFDFALATKLAD 188
R L KW LR TY + H +R RE GF+VYE M ++ Y+ D L D
Sbjct: 172 RCLELASKWGLRLSGYTYKCIVQAH-LRSREVSKGFQVYEEM-RRKGYKLDIFAYNMLLD 229
Query: 189 YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG 248
+ K + +F+D+ + VP T+ ILI A G + S ++ M+ G
Sbjct: 230 ALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKA---GRTSKFLSFFDEMVSKG 286
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
L+ F ++ G + + F+ ++ + + + YS + + + +
Sbjct: 287 CV-----LNLIAFNTIIEALG--KNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATE 339
Query: 309 DNIDK--ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
+ + E + + + M ++ + +++ K G +A + R+ S
Sbjct: 340 GQLHRLNEVLDICSRFMNRSIYS-------YLVKSLCKSGHASEAHNVFCRMWNSHEKGD 392
Query: 367 TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
AFV +E + ++++++ M E+ V Y+ + L K ++ +L
Sbjct: 393 RDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFD 452
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE--KCRPNRTIYGIYLESLKNA 484
+ G+ P + +Y + + Y +G+ D+ F E +E C+P+ Y + L
Sbjct: 453 KMKTNGIIPDVFTYNIMISSYGRVGLVDKASELF-EVMEASSCKPDVVTYNSLINCLGKH 511
Query: 485 GNIEKAEEIFNHMH 498
G++++A +F M
Sbjct: 512 GDLDEAHMLFKEMQ 525
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
Query: 363 NGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
NGI F Y + +Y ++G K+ E+F M+ V Y+ +I L K + +
Sbjct: 457 NGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDE 516
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECL-EKCRPNRTIYGI 476
L KE E G P + +Y L + G +++ +A F E + E C PN Y I
Sbjct: 517 AHMLFKEMQEKGYDPDVFTYSILIECF---GKSNKVEMACSLFDEMISEGCTPNIVTYNI 573
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTI 503
L+ L+ G E+A +++ M I
Sbjct: 574 LLDCLERRGKTEEAHKLYETMKQQGLI 600
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 143/336 (42%), Gaps = 24/336 (7%)
Query: 119 LCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAV--HCMRIRENETGFRVYEWMMQQHWY 176
+C S K V I A K + Y AV C + + T R++ M++Q
Sbjct: 162 ICAYGRSGKLAKAVEIFEAMKVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMS 221
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
T L G+ ++ +C IF ++ +G ++T++ LI Y G +
Sbjct: 222 PDRITFNT-LISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRG---GQMHL 277
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYL-QQAEFIFHNLLTSGLEIQK 295
++ M + G +P ++++ G +K L +A +F + +E
Sbjct: 278 GAALMETMAKSSGIEPSVITYSTMI-------DGYAKLGLAHEAIALFQEMRNQNVEPDG 330
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
Y+ ++ +H+ N D+ +++ M++AGF + ++L K+G +A
Sbjct: 331 ICYNTMVDIHARLGNFDEAHS--IRRAMEEAGFAKDIVTYNALLDSYGKQGKFREA---- 384
Query: 356 LRLLE--SDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
+ LLE G Y ++AY K G ++ +F+++++ V Y +++
Sbjct: 385 MSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDG 444
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
CK + +L++E + G++P + +Y +L + Y
Sbjct: 445 CCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAY 480
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 108/257 (42%), Gaps = 6/257 (2%)
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
A+ IF + +G +YS LI + + K ++ E + + V +V
Sbjct: 139 AQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAK---AVEIFEAMKVVCKPNLVVYNAV 195
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
+ C+K GD A + + +LE F + A + + + IF EM+ER
Sbjct: 196 IDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGI 255
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVE-TGMKPLMPSYINLTNMYLNLGM-HDRL 456
+ Y+ +I C+ + L +LM+ + +G++P + +Y + + Y LG+ H+ +
Sbjct: 256 ARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAI 315
Query: 457 HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
L + P+ Y ++ GN ++A I M + + + N +L +
Sbjct: 316 ALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAME-EAGFAKDIVTYNALLDS 374
Query: 517 YLSSGDFVKAEKIYDLM 533
Y G F +A + + M
Sbjct: 375 YGKQGKFREAMSLLEEM 391
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 150/365 (41%), Gaps = 48/365 (13%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
++++ + D L + + + + IF + + G P+ TF+ LI Y +A
Sbjct: 119 VEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNA-- 176
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G +E + + M G +P +N L RA SK +++A + H ++ SG
Sbjct: 177 -GKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKKN------IEEAWNVLHKMVASG 229
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
IQ D+ + I +Y + R L EMQ + ++ KEG++ +
Sbjct: 230 --IQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIE 287
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
A LR FVY+M+ +L IF + + G + + E
Sbjct: 288 A----LR------------FVYRMKELG----VHPNLVIFNSLIK--GFLDITDTDGVDE 325
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRP 469
L +LM+E+ G+KP + ++ + N + + G+ D+ F++ + P
Sbjct: 326 AL----------TLMEEY---GVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEP 372
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
+ + I + AG E AE + M + + N C I+S + S+G A+ +
Sbjct: 373 DIHAFSILAKGYVRAGETENAESVLTSM-AKSGVRPNVVICTTIISGWCSAGKMENAKMV 431
Query: 530 YDLMC 534
Y+ MC
Sbjct: 432 YEKMC 436
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
IF + E ++ Y ++ L K + E L+ + E GMKP Y + N +
Sbjct: 80 IFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFS 139
Query: 449 NLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
G F + + C+P + + ++ NAG E+ ++ + M D ++ N
Sbjct: 140 ESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPND 199
Query: 508 RSCNIILSAYLSSGDFVKA 526
R+ NI++ A+ S + +A
Sbjct: 200 RTYNILVRAWCSKKNIEEA 218
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/406 (19%), Positives = 160/406 (39%), Gaps = 16/406 (3%)
Query: 131 LVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
R+L A + E T+L C R +E + M + T +
Sbjct: 179 FARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLC 238
Query: 191 GKERKFAKCRDIFDDIINQGR--VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG 248
G R + D+ + +G P ++F+ +I + QG + +AC++ N M+Q
Sbjct: 239 GDSRS-QEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFK---QGEVSKACNLINEMVQ-K 293
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
G +P +NS+ AL + +AE + ++ G+E Y+ +I H Y
Sbjct: 294 GVEPDVVTYNSIVDALCKARA------MDKAELVLRQMVDKGVEPDGLTYTAII--HGYS 345
Query: 309 DNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
+ + + + ++M G G S + K G +DAE+ + + +
Sbjct: 346 CSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLV 405
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
++ + YA G F +F M ++ A+ ++ +I K + + E
Sbjct: 406 SYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEM 465
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNI 487
G++P + +Y L + + +G FS+ + PN +Y + G++
Sbjct: 466 QGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDL 525
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
KA+E+ + M S N + I+ + + G + A +++L+
Sbjct: 526 VKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLV 571
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 131/326 (40%), Gaps = 54/326 (16%)
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
E +FA ++F + ++G V + F+ILI A+ +G +DEA ++ M Q G +P
Sbjct: 417 EGRFADMNNLFHSMADKGIVANCHCFNILISAHAK---RGMMDEAMLVFTEM-QGQGVRP 472
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+++L A L A F +++ GLE +Y LI
Sbjct: 473 DVVTYSTLISAFCRMG------RLADAMEKFSQMISIGLEPNTVVYHSLIH--------- 517
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
GF GD+ A++ ++ GIP P V+
Sbjct: 518 --------------GF--------------CMHGDLVKAKELVSEMMS--KGIPRPNIVF 547
Query: 373 ---KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
+ + G M + ++F + ++ ++ +I+ C + E ++ V
Sbjct: 548 FSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMV 607
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIE 488
G++P + +Y L + Y G D + F E L +K +P Y I L+ L +AG
Sbjct: 608 SVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTS 667
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIIL 514
A+++F+ M D V+ + I+L
Sbjct: 668 AAKKMFHEM-IDSGTAVDIDTYKILL 692
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 70/359 (19%), Positives = 142/359 (39%), Gaps = 17/359 (4%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
MQ R D + L + + A + F +I+ G P+ + +H LI + +
Sbjct: 465 MQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFC---M 521
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G L +A + + M+ G +P +S+ +L ++ + A +F+ ++ G
Sbjct: 522 HGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEG------RVMDAHDVFNLVIHIG 575
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
++ LI + ++K L M G E +++ K G ++D
Sbjct: 576 DRPTIVTFNSLIDGYCLVGKMEKAFGVL--DAMVSVGIEPDVVTYNTLVSGYCKSGKIDD 633
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
+ +L T + ++ G + ++F EM + + + Y +++
Sbjct: 634 GLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLK 693
Query: 411 LLCKAEETELTESLMKEFVETGMK---PLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC 467
LC+ + T+ +L + K ++ + IN + L A S
Sbjct: 694 GLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAIST--SGL 751
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
PN + YG+ + +L G++E+A+ +F+ M ++R N I+ L GD VKA
Sbjct: 752 VPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGC-APSSRLLNDIIRMLLQKGDIVKA 809
Score = 38.9 bits (89), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
+FD + + + + K R+ + D+F I G VP+ T+ ++I L +G ++E
Sbjct: 717 KFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLK---EGSVEE 773
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK--YYLQQAEFIFHNLLTSGLEIQ 294
A ++++ M + G P L N + R L+ K G + K YY+ + + +L S +
Sbjct: 774 ADTMFSSM-EKSGCAPSSRLLNDIIRMLLQK-GDIVKAGYYMSKVDGTIISLEASTTSLL 831
Query: 295 KDIYS 299
++S
Sbjct: 832 MSLFS 836
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 159/374 (42%), Gaps = 32/374 (8%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
G+R + W +Q YR + + + +GK R+F + +++ + P +T + I
Sbjct: 147 GYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKEN--PYMLTPEVFI 204
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
V + +A + + M + G +P + L AL K G + ++A +
Sbjct: 205 VLMRRFASVRMVKKAVEVLDEMPKYG-CEPDEYVFGCLLDALC-KNGSV-----KEAASL 257
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
F ++ ++ L++ + I + + L+ ++++AGFE V ++L
Sbjct: 258 FEDMRVR-FNPNLRHFTSLLYGWCREGKIMEAKHVLV--QIKEAGFEPDIVVYNNLLGGY 314
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
A+ G + DA + + + G +F ++++ K + +++ IF EMQ A V
Sbjct: 315 AQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADV 374
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
Y +I CK T+ ++ + ++ G P SY+ + + H++ E
Sbjct: 375 VTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCI------MMAHEKKE-ELEE 427
Query: 463 CLE--------KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
C+E C P+ IY + + G++++A ++ M Q G+N IL
Sbjct: 428 CMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEM---QAGGLNPGLDTYIL 484
Query: 515 --SAYLSSGDFVKA 526
+LS G V+A
Sbjct: 485 MVHGFLSQGCLVEA 498
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 161/397 (40%), Gaps = 30/397 (7%)
Query: 146 DGTYLAVH--CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIF 203
D Y VH C + R + + FR + M+ +++ D L T L + K+ K + +++
Sbjct: 396 DNCYSVVHWLCKKFRYH-SAFRFTKMMLSRNFRPSDLLL-TMLVCGLCKDGKHLEATELW 453
Query: 204 DDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRA 263
++ +G S++T + LI A G L EA I M++ G R + +N+L
Sbjct: 454 FRLLEKGSPASKVTSNALIHGLCGA---GKLPEASRIVKEMLERGLPMDRIT-YNALILG 509
Query: 264 LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYS------GLIWLHSYQDNIDKERIS 317
++ G + + + E + IQ DIY+ GL + D I
Sbjct: 510 FCNE-GKVEGCFRLREEM-------TKRGIQPDIYTYNFLLRGLCNVGKLDDAIK----- 556
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
L E + +G ++ K +ED E + LL + + + ++A+
Sbjct: 557 -LWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAH 615
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
+ G +L++ M+ + + Y +I +C E + L+ E + G P +
Sbjct: 616 CQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNV 675
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
Y L Y LG D + E + PN+ Y + ++ GN+EKA +
Sbjct: 676 VCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIK 735
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M + I + + N++ + + + D A K+ D M
Sbjct: 736 M-KESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQM 771
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 73/185 (39%), Gaps = 17/185 (9%)
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
+ + + K EF K E+FR M E V ++ +I LCK + E L + +
Sbjct: 191 FXLSSLVKANEFEKCCEVFRVMSEG-ACPDVFSFTNVINALCKGGKMENAIELFMKMEKL 249
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAF----SECLEKCRPNRTIYGIYLESLKNAGNI 487
G+ P + +Y + N L + RL AF ++ +PN YG + L
Sbjct: 250 GISPNVVTYNCIIN---GLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFF 306
Query: 488 EKAEEIFNHMHSDQTIGV----NTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESA 543
+K I D+ IG N N ++ Y G+ A KI D+M K S
Sbjct: 307 DKVNHIL-----DEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSV 361
Query: 544 WMEKL 548
+ L
Sbjct: 362 TLYSL 366
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 10/163 (6%)
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELLCKAEETELTESLMKE 427
+F + A K G+ ++E+F +M E+LG S +V Y+ II LC+ + L ++
Sbjct: 222 SFTNVINALCKGGKMENAIELFMKM-EKLGISPNVVTYNCIINGLCQNGRLDNAFELKEK 280
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGN 486
G++P + +Y L N + L D+++ E + PN ++ ++ GN
Sbjct: 281 MTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGN 340
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
IE A +I D I N ++ L + + F K+++I
Sbjct: 341 IEGALKI-----KDVMISKNITPTSVTLYSLMQG--FCKSDQI 376
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 133/351 (37%), Gaps = 55/351 (15%)
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS 255
F K I D++I G P+ + F+ LI Y G ++ A I + MI P
Sbjct: 306 FDKVNHILDEMIGAGFNPNVVVFNNLIDGYCK---MGNIEGALKIKDVMIS-KNITPTSV 361
Query: 256 LHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD-IYSGLIWLHSYQDNIDKE 314
SL + ++ AE +L+SGL I D YS + WL
Sbjct: 362 TLYSLMQGFCKSD------QIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAF 415
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCA--KEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
R + K M F ++LL++L VC K+G +A + W RLLE G P
Sbjct: 416 RFT---KMMLSRNFRP-SDLLLTML-VCGLCKDGKHLEATELWFRLLEK--GSP------ 462
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
AS + +I LC A + ++KE +E G
Sbjct: 463 ---------------------------ASKVTSNALIHGLCGAGKLPEASRIVKEMLERG 495
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAE 491
+ +Y L + N G + E ++ +P+ Y L L N G ++ A
Sbjct: 496 LPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAI 555
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIES 542
++++ + I N + I++ Y + E +++ + KK E+ S
Sbjct: 556 KLWDEFKASGLIS-NIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNS 605
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 120/293 (40%), Gaps = 19/293 (6%)
Query: 236 EACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQK 295
EAC+ Y +++ G P L N L R LV L + L A+ +F + + G +++
Sbjct: 223 EACAFYLQLLD-AGLPPEAKLFNVLMRDLVR----LGE--LASAQNVFDEMQSRG--VRR 273
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
+ S + D + L + M +AG ++++ + G +EDA +
Sbjct: 274 TVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVF 333
Query: 356 LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
++ F ++A+ K G+ LE+ REM+ER Y+ I+ LC+A
Sbjct: 334 EKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRA 393
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMY-----LNLGMHDRLHLAFSECLEKCRPN 470
+ + ++ E G++P +Y L + Y L++ M + ++ E +
Sbjct: 394 RDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVA----EGVGLD 449
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
Y + L AG AE + M NT + +++ A+ GD
Sbjct: 450 EVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNT-TYTMVIDAFCRKGDV 501
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 100/236 (42%), Gaps = 12/236 (5%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
R +F+ + +G P+ + F ILI A+ +G + ++ M + G +P +N+
Sbjct: 330 RGVFEKMCGRGMKPNAVVFTILIDAHCK---KGDAETMLELHREMRERG-VRPDAVTYNA 385
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
+ L L+ A I + ++GL Y+ LI + ++ +D +
Sbjct: 386 IVNGLCRA------RDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMA--MEI 437
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAK 379
K+ M G + +++ +K G DAE+ ++E+ + ++A+ +
Sbjct: 438 KQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCR 497
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
G+ L + +EMQ + V Y+ I+ CK + + + L+ + G+ P
Sbjct: 498 KGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSP 553
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 61/347 (17%), Positives = 130/347 (37%), Gaps = 44/347 (12%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
+ A +++FD++ ++G + ++F+ +I A G LD A +++ RM + G P
Sbjct: 255 ELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRA---GDLDGAETLHRRMSE-AGVTPDV 310
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI--- 311
+ +L + L ++ A +F + G++ +++ LI H + +
Sbjct: 311 YTYGALIQGLCRV------GRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETM 364
Query: 312 ------------------------------DKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
D + S + EM+ AG +++
Sbjct: 365 LELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDG 424
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSAS 401
KE +++ A + ++ G+ + + +K G + + EM E
Sbjct: 425 YCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPD 484
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
Y +I+ C+ + + L+KE G KP + +Y + N + LG + +
Sbjct: 485 NTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLN 544
Query: 462 ECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
+ P+ Y I L+ G + EE+ + + +GV T
Sbjct: 545 AMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSAKGTVPDLGVYT 591
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 161/397 (40%), Gaps = 30/397 (7%)
Query: 146 DGTYLAVH--CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIF 203
D Y VH C + R + + FR + M+ +++ D L T L + K+ K + +++
Sbjct: 419 DNCYSVVHWLCKKFRYH-SAFRFTKMMLSRNFRPSDLLL-TMLVCGLCKDGKHLEATELW 476
Query: 204 DDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRA 263
++ +G S++T + LI A G L EA I M++ G R + +N+L
Sbjct: 477 FRLLEKGSPASKVTSNALIHGLCGA---GKLPEASRIVKEMLERGLPMDRIT-YNALILG 532
Query: 264 LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYS------GLIWLHSYQDNIDKERIS 317
++ G + + + E + IQ DIY+ GL + D I
Sbjct: 533 FCNE-GKVEGCFRLREEM-------TKRGIQPDIYTYNFLLRGLCNVGKLDDAIK----- 579
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
L E + +G ++ K +ED E + LL + + + ++A+
Sbjct: 580 -LWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAH 638
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
+ G +L++ M+ + + Y +I +C E + L+ E + G P +
Sbjct: 639 CQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNV 698
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
Y L Y LG D + E + PN+ Y + ++ GN+EKA +
Sbjct: 699 VCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIK 758
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M + I + + N++ + + + D A K+ D M
Sbjct: 759 M-KESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQM 794
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 10/163 (6%)
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELLCKAEETELTESLMKE 427
+F + A K G+ ++E+F +M E+LG S +V Y+ II LC+ + L ++
Sbjct: 245 SFTNVINALCKGGKMENAIELFMKM-EKLGISPNVVTYNCIINGLCQNGRLDNAFELKEK 303
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGN 486
G++P + +Y L N + L D+++ E + PN ++ ++ GN
Sbjct: 304 MTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGN 363
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
IE A +I D I N ++ L + + F K+++I
Sbjct: 364 IEGALKI-----KDVMISKNITPTSVTLYSLMQG--FCKSDQI 399
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 71/181 (39%), Gaps = 9/181 (4%)
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
+ + + K EF K E+FR M E V ++ +I LCK + E L + +
Sbjct: 214 FLLSSLVKANEFEKCCEVFRVMSEG-ACPDVFSFTNVINALCKGGKMENAIELFMKMEKL 272
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAF----SECLEKCRPNRTIYGIYLESLKNAGNI 487
G+ P + +Y + N L + RL AF ++ +PN YG + L
Sbjct: 273 GISPNVVTYNCIIN---GLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFF 329
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEK 547
+K + + M N N ++ Y G+ A KI D+M K S +
Sbjct: 330 DKVNHVLDEM-IGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYS 388
Query: 548 L 548
L
Sbjct: 389 L 389
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 133/351 (37%), Gaps = 55/351 (15%)
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS 255
F K + D++I G P+ + F+ LI Y G ++ A I + MI P
Sbjct: 329 FDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCK---MGNIEGALKIKDVMIS-KNITPTSV 384
Query: 256 LHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD-IYSGLIWLHSYQDNIDKE 314
SL + ++ AE +L+SGL I D YS + WL
Sbjct: 385 TLYSLMQGFCKSD------QIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAF 438
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCA--KEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
R + K M F ++LL++L VC K+G +A + W RLLE G P
Sbjct: 439 RFT---KMMLSRNFRP-SDLLLTML-VCGLCKDGKHLEATELWFRLLEK--GSP------ 485
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
AS + +I LC A + ++KE +E G
Sbjct: 486 ---------------------------ASKVTSNALIHGLCGAGKLPEASRIVKEMLERG 518
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAE 491
+ +Y L + N G + E ++ +P+ Y L L N G ++ A
Sbjct: 519 LPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAI 578
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIES 542
++++ + I N + I++ Y + E +++ + KK E+ S
Sbjct: 579 KLWDEFKASGLIS-NIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNS 628
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 135/316 (42%), Gaps = 19/316 (6%)
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM-IQLGG 249
+ +F R + D + ++G P ++F+ LI A + GCL ++ ++ G
Sbjct: 232 ARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKS---GCLAAGVALDLLFEVRQSG 288
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI--YSGLIWLHSY 307
+P +N+L A L+ A +F +++ S E + D+ Y+ ++ +H
Sbjct: 289 LRPDVITYNTLISACSQSSN------LEDAVTVFEDMIAS--ECRPDLWTYNAMVSVHGR 340
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
E L +E+ + GF S+L AKEG+V+ E T +L+++
Sbjct: 341 CGK--AEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNE 398
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
+ + Y K+G ++ ++ EM+ + Y +I+ L K ++++
Sbjct: 399 ITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLED 458
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL--EKCRPNRTIYGIYLESLKNAG 485
+ G+KP + ++ L Y G F +C+ +P+R Y + L+ +G
Sbjct: 459 MTDAGLKPTLIAFSALICAYAKGGRRADAENTF-DCMIASGVKPDRLAYLVMLDVFARSG 517
Query: 486 NIEKAEEIFNHMHSDQ 501
+ EK ++ M +D
Sbjct: 518 DTEKMLCLYRKMMNDN 533
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 142/318 (44%), Gaps = 20/318 (6%)
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH--NSLFRALVSKPGGLSKYY 275
++ LI AY + G ++A ++++ MI+ G P P++ N + RAL+ G L + Y
Sbjct: 783 WNALIHAYAES---GLYEKARAVFDNMIKTG---PLPTVDSVNGMMRALIVD-GRLDELY 835
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+ + L +I K L+ L ++ D + + M+ AG+ +
Sbjct: 836 V-----VVEELQDMNFKISKSTV--LLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLY 888
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM-EAYAKIGEFMKSLEIFREMQ 394
S++ + D E + +E P A + + Y G F ++ +++R +
Sbjct: 889 RSMISLLCHHNRFRDVE-LMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSIL 947
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
E Y+ +I + C++ E +L+ E + G+ P + SY +L + +
Sbjct: 948 EAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELRE 1007
Query: 455 RLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
+ F E K + NR+IY + ++ +NAGN KAE + M D I + +I+
Sbjct: 1008 QADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKED-GIEPTIATMHIL 1066
Query: 514 LSAYLSSGDFVKAEKIYD 531
+++Y ++G +AE + +
Sbjct: 1067 MTSYGTAGQPREAENVLN 1084
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/340 (18%), Positives = 149/340 (43%), Gaps = 18/340 (5%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
D+ ++ G P +T++ LI A L++A +++ MI + RP L
Sbjct: 279 DLLFEVRQSGLRPDVITYNTLISA---CSQSSNLEDAVTVFEDMI---ASECRPDLWT-- 330
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
+ A+VS G K ++AE +F L+ G Y+ L++ + + N+DK +
Sbjct: 331 YNAMVSVHGRCGK--AEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDK--VEHTC 386
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
+++ +AGF++ + +++ + K G ++ A + + + +++ K+
Sbjct: 387 EQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKM 446
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
++ ++ +M + ++ A+ +I K E+ + +G+KP +Y
Sbjct: 447 NRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAY 506
Query: 441 INLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+ + +++ G +++ + + + + RP+ +Y + L +L E+ EE+ M
Sbjct: 507 LVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMEL 566
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
+ + S +I + +S G K+ CL+ Y+
Sbjct: 567 LCRMNLGIISTMLIKARCVSQG-----AKLLKKACLQGYK 601
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 116/293 (39%), Gaps = 40/293 (13%)
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
QQAE + L + I + I++ LI H+Y ++ E+ + M + G + +
Sbjct: 763 QQAEILVKGLRQAS-GIDRRIWNALI--HAYAESGLYEKARAVFDNMIKTGPLPTVDSVN 819
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
++R +G +++ L + + I + ++A+AK G+ + ++I+ M+
Sbjct: 820 GMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAA 879
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
++ Y +I LLC E ++ E G KP + L NMY G DR
Sbjct: 880 GYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRT 939
Query: 457 HLAFSECLEK----------------CR--------------------PNRTIYGIYLES 480
+ LE CR P Y L +
Sbjct: 940 TQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAA 999
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A E+A++IF M S ++ +N ++++ Y ++G+ KAE + +M
Sbjct: 1000 SAKAELREQADQIFEEMRS-KSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVM 1051
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 95/236 (40%), Gaps = 19/236 (8%)
Query: 164 FRVYEWM---MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
FR E M M+ ++ D A+ L + F + ++ I+ G P E T++
Sbjct: 901 FRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNT 960
Query: 221 LIVAYLSA--PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQ 278
LIV Y + P +E ++ N M + G P+ + SL A S L +Q
Sbjct: 961 LIVMYCRSFRP-----EEGFTLLNEMGK-RGLTPKLQSYKSLLAA--SAKAELR----EQ 1008
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
A+ IF + + ++ + IY + + Y++ + + L M++ G E + +
Sbjct: 1009 ADQIFEEMRSKSYQLNRSIYH--MMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHIL 1066
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
+ G +AE L S + T + +AY K G++ EM+
Sbjct: 1067 MTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMK 1122
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 144/363 (39%), Gaps = 37/363 (10%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+++ D T L D + K + + + + + + ++ P+ +T+ LI
Sbjct: 327 MRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKT-- 384
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQ--------AEFI 282
G + +A ++ RMI + G +P +NSL G S L + + I
Sbjct: 385 -GQVRDAQEVFKRMI-VRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDII 442
Query: 283 FHNLLTSGLE-------------------IQKDI--YSGLIWLHSYQDNIDKERISLLKK 321
+N L GL D+ YS LI + ID R +L
Sbjct: 443 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR-TLFDD 501
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
++QA + V C G V+DAE+ ++ SD + ++ + K+G
Sbjct: 502 MLKQAVLPDVVTFSTLVEGYC-NAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVG 560
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+++ + + M +R +V Y +I+ C+A + + L++E V G++P + +Y
Sbjct: 561 RMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYR 620
Query: 442 NLTNMYLNLG--MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+L + G R L E E C+ + Y + ++ L G + A E+ +
Sbjct: 621 SLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQ 680
Query: 500 DQT 502
T
Sbjct: 681 SGT 683
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/161 (19%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ + K+ + ++ + +EM+E + +V Y +I C+ + + L ++ VE G
Sbjct: 168 INGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGC 227
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEE 492
P + +Y L + G+ D + E E+ +P++ Y + L G I+ A +
Sbjct: 228 MPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALK 287
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+F +S+ + + + +++ +G +A K+++ M
Sbjct: 288 VFED-NSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKM 327
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 74/391 (18%), Positives = 147/391 (37%), Gaps = 73/391 (18%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYN- 242
T + D + K + + F + +G VP+E T+++LI + C ++
Sbjct: 130 TIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGF------------CKVHKV 177
Query: 243 -------RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQK 295
+ ++ G P ++++ + + Y L + + N L
Sbjct: 178 HRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQ--MVENGCMPNLVTYN 235
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK---EVLLS----------VLRV- 341
+ SGL ++ + E LL EM++ G + K + L++ L+V
Sbjct: 236 TLLSGLC-----RNGLMDEAYELLD-EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVF 289
Query: 342 -------C--------------AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
C K G +++A K + ++ E+ F M+ K
Sbjct: 290 EDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKG 349
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
++ ++ M++R + +V Y +I+ LCK + + + K + G++P + +Y
Sbjct: 350 DRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTY 409
Query: 441 INLTNMY-LNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+L + + + G+ L L C P+ Y ++ L G +A +F M +
Sbjct: 410 NSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKA 469
Query: 500 D-QTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
V T SC I G F K E+I
Sbjct: 470 KFCNPDVITYSCLI--------GGFCKLERI 492
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 155/359 (43%), Gaps = 53/359 (14%)
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS 255
F + ++ ++ + G P+E+ F+ LI Y +G + EA + + M + G +P
Sbjct: 341 FEEANEVLVEMYSMGFAPNEVVFNALIDGYCR---KGDMGEALRVRDEM-AMKGMKPNFV 396
Query: 256 LHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER 315
N+L + G ++QAE + +L+SGL + D+ S +I
Sbjct: 397 TFNTLLQ------GFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVI------------- 437
Query: 316 ISLLKKEMQQAGFEEGKEV---LLS-------------VLRVCAKEGDVEDAEKTWLRLL 359
+ M+++GF ++ LLS V+ +C EG E E W +L
Sbjct: 438 ----HRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIE-LWFKLA 492
Query: 360 E----SDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
+ N + + A ++ + + G + E+ ++M E+ +Y+ +I CK
Sbjct: 493 AVKGLAANTVTSNALLHGL---CERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKW 549
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIY 474
+ E L +E V+ +P +Y L ++G D +H E E PN Y
Sbjct: 550 GKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTY 609
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ LE A IE A + F ++ ++ + +++ NI+++AY G+ +A K+ D M
Sbjct: 610 ALLLEGYCKADRIEDAVKFFKNLDYEK-VELSSVVYNILIAAYCRIGNVTEAFKLRDAM 667
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 82/207 (39%), Gaps = 1/207 (0%)
Query: 292 EIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
E Q D Y+ + D + + L E ++ GF +L K +EDA
Sbjct: 566 EFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDA 625
Query: 352 EKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
K + L + + + + AY +IG ++ ++ M+ R + Y +I
Sbjct: 626 VKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHG 685
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPN 470
+C + + + +E G+ P + Y L + LG D + E RPN
Sbjct: 686 MCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPN 745
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ Y I ++ GN+++A E+ N M
Sbjct: 746 KITYTIMIDGYCKLGNMKEARELLNEM 772
>gi|255549794|ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544853|gb|EEF46368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 706
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 180/444 (40%), Gaps = 60/444 (13%)
Query: 128 GGTLVRILNAQKKW-LRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALAT 184
G L R + +KW L+ TY L +R +++ GFRVY M++ Y D
Sbjct: 23 GEDLERCIGLIEKWDLKMNGYTYKCLVQAYLRSCDSDNGFRVY-LEMKRKGYTLDIFAFN 81
Query: 185 KLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM 244
L D + K++K + +F+D+ + P E T+ I+I ++ + G LDE+ +++ M
Sbjct: 82 MLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMI--RMTGRI-GKLDESLALFEEM 138
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
+ G P +N++ +AL + + + +F ++ + YS ++ L
Sbjct: 139 LN-KGCSPNLIAYNTMIQALANSR------MVDKTILLFSKMMEKNCRPNEFTYSVILTL 191
Query: 305 HSYQDNIDK--ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW------- 355
+ + + K + + L +K M ++ + ++R K G +A + +
Sbjct: 192 LAAEGQLHKLDKVVELSRKYMNRS-------IYAYLVRTLNKLGHASEAHRLFCNMWSYH 244
Query: 356 --------LRLLES------------------DNGIPTPAFVYK--MEAYAKIGEFMKSL 387
L +LES + GI T +Y A ++ +
Sbjct: 245 DRGDRDACLSMLESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVFTALGRLKQISHLY 304
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
+++ +M+ + Y+ +I +A + + +E + KP + SY +L N
Sbjct: 305 DLYEKMKLDGPLPDIFTYNILISSFGRAGKVYEAIKIFEELENSDCKPDIISYNSLINCL 364
Query: 448 LNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN 506
G D H+ F E EK P+ Y +E +E A +F+ M ++ N
Sbjct: 365 GKNGDLDEAHIRFREMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCFP-N 423
Query: 507 TRSCNIILSAYLSSGDFVKAEKIY 530
+ NI+L SG +A +Y
Sbjct: 424 IVTYNILLDCLERSGRTAEAVDLY 447
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 302 IWLHSYQDNIDKER-ISLLKK-EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
I + + D D ER I L++K +++ G+ K ++ + LR C D ++ + +L +
Sbjct: 15 ILIGFFGDGEDLERCIGLIEKWDLKMNGYTY-KCLVQAYLRSC----DSDNGFRVYLEMK 69
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
+ AF ++A AK + ++ ++F +M+++ Y +I + + + +
Sbjct: 70 RKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKLD 129
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYL 478
+ +L +E + G P + +Y + N M D+ L FS+ +EK CRPN Y + L
Sbjct: 130 ESLALFEEMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSVIL 189
Query: 479 ESLKNAGNIEKAEEI 493
L G + K +++
Sbjct: 190 TLLAAEGQLHKLDKV 204
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 10/241 (4%)
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ ++ G + Y+ LI HSY + N + + + EMQ+ G E + +++
Sbjct: 402 LLDQMVKDGCQPNVVTYNRLI--HSYGRANYLNDAVDVFN-EMQRVGCEPDRVTYCTLID 458
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLG 398
+ AK G ++ A + + R+ + G+ F Y + K G + ++F EM E+
Sbjct: 459 IHAKAGFLDFALEMYQRMQAA--GLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGC 516
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
++ Y+ +I L KA + L ++ G +P +Y + + + G D
Sbjct: 517 VPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEA 576
Query: 459 AFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
FSE K P+ +YG+ ++ AGN+EKA + + M + + N +CN +LSA+
Sbjct: 577 VFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTML-NTGLRPNVPTCNSLLSAF 635
Query: 518 L 518
L
Sbjct: 636 L 636
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 129/318 (40%), Gaps = 43/318 (13%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+++++ + W+ +Q + D T + +G+ ++F + D ++ G P+
Sbjct: 356 QLQDHTVALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNV 415
Query: 216 MTFHILI-----VAYLSAPVQ--------GC-------------------LDEACSIYNR 243
+T++ LI YL+ V GC LD A +Y R
Sbjct: 416 VTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQR 475
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M Q G P ++ + L K G +L A +F ++ G Y+ +I
Sbjct: 476 M-QAAGLSPDTFTYSVIINCL-GKAG-----HLAAAHKLFCEMVEQGCVPNLVTYNIMIA 528
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
L + N + L ++MQ AGF+ K V+ V G +++AE + ++ N
Sbjct: 529 LQAKARNY--QSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSE-MKRKN 585
Query: 364 GIPT-PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+P P + ++ + K G K+ + ++ M +VP + ++ + +
Sbjct: 586 WVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAY 645
Query: 423 SLMKEFVETGMKPLMPSY 440
+L++ +E G+ P + +Y
Sbjct: 646 NLLQSMLELGLNPSLQTY 663
>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 148/350 (42%), Gaps = 19/350 (5%)
Query: 188 DYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL 247
D + +E K F ++ +GR P +++ ILI A G + +A I+N MI+
Sbjct: 122 DLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRA---GKVTDAVEIWNAMIR- 177
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
G P N ALV K L E + + ++ +++ +Y+ LI
Sbjct: 178 SGVSP----DNKACAALVVGLCHARKVDLAY-EMVAEEIKSARVKLSIVVYNALISGFCK 232
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
I E+ LK M + G E +L ++ AE ++ S GI
Sbjct: 233 AGRI--EKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRS--GIQL 288
Query: 368 PAFVYK--MEAYAKIGEFMKSLE-IFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
A+ Y ++ + ++ + + +EM+ R G V +Y +IE C+A T+ L
Sbjct: 289 DAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPR-GFCDVVSYSTLIETFCRASNTKKAYKL 347
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKN 483
+E + G+ + ++ +L +L G + E P+R Y L+ L
Sbjct: 348 FEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK 407
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+GN++KA IFN M + I + S N ++S SG +A K+++ M
Sbjct: 408 SGNVDKAYGIFNDM-IEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
K G +++A + + + S + + + + K F + I+R+M +G + +
Sbjct: 20 VKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRDMMP-MGFSLI 78
Query: 403 P-AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN-LGMHDRLHLA- 459
P Y + I LCK ++ EL ++L+++ G P + ++ N+YL+ L +++ A
Sbjct: 79 PFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAF----NIYLDLLCRENKVGFAV 134
Query: 460 --FSECLEKCR-PNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
F +++ R P+ Y I + L AG + A EI+N M
Sbjct: 135 QTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAM 175
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 111/286 (38%), Gaps = 26/286 (9%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG-- 249
K ++ + DIF +++ P+ +T+ LI A G + +AC +Y ++I G
Sbjct: 534 KSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKA---GEIQKACEVYEKLIGTSGNV 590
Query: 250 -------------YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
P + +L L + A + +L +G E +
Sbjct: 591 ESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQK------VSDAHELLDAMLAAGCEPNQI 644
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
+Y LI ID + L+ M + G+ S++ K+G ++ A K
Sbjct: 645 VYDALIDGFCKIGKIDNAQEVFLR--MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 702
Query: 357 RLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
+L + ++ +K+GE K+L + M+E+ S +V Y +I+ L K
Sbjct: 703 EMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTG 762
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
+ + + L K+ G P +Y L N G+ D HL E
Sbjct: 763 KADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDE 808
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 144/387 (37%), Gaps = 46/387 (11%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
M+++ + D L T++ + + F + + +P+ +T+ L+ +L
Sbjct: 261 MLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKK 320
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
G C M+ G P PSL NSL + Y L F+ + T
Sbjct: 321 QFG----WCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKL------FNRMTTC 370
Query: 290 GLEIQKDIYSGLIWLHSYQDNI-DKERISLLKK---EMQQAGFEEGKEVLLSVLRVCAKE 345
G Y+ I Q+ + + E + L++K EM A K + R
Sbjct: 371 GSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGV 430
Query: 346 GDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFM-------KSLEIFREMQERLG 398
G E A + ++ FV Y K+ F+ KS +F+EM+
Sbjct: 431 GKFEKAFQILKEMMRK-------GFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGV 483
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN----LGMHD 454
+ V Y +I+ CKA E S E G P + +Y L + YL + HD
Sbjct: 484 NPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHD 543
Query: 455 RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF-------NHMHSDQTIGVN- 506
H C PN Y ++ L AG I+KA E++ ++ SD N
Sbjct: 544 IFHRMVD---AACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGND 600
Query: 507 --TRSCNIILSAYLSSGDFVKAEKIYD 531
T + N++ L G KA+K+ D
Sbjct: 601 TCTIAPNVVTYGALIDG-LCKAQKVSD 626
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 123/292 (42%), Gaps = 18/292 (6%)
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
+R L+S G L K + I + ++T G +++ L+ H Y + D L
Sbjct: 309 YRTLLS--GFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLV--HGYCNAGDYAYAYKLF 364
Query: 321 KEMQQAGFEEGKEVL-LSVLRVCAKE----GDVED-AEKTWLRLLESD---NGIPTPAFV 371
M G G + + +C +E ++ D EK + +L + N + T F
Sbjct: 365 NRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANF- 423
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
+G+F K+ +I +EM + Y K+I LC+A++ E + L +E
Sbjct: 424 --SRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRA 481
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKA 490
G+ P + +Y L + + G+ ++ F E C PN Y L + + + +A
Sbjct: 482 GVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQA 541
Query: 491 EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIES 542
+IF+ M D N + + ++ +G+ KA ++Y+ + +ES
Sbjct: 542 HDIFHRM-VDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVES 592
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 144/342 (42%), Gaps = 25/342 (7%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M++ D T L D K + R FD++ + G P+ +T+ L+ AYL +
Sbjct: 478 MKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQ 537
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
L +A I++RM+ Y P +++L L K G +Q+A ++ L+ +
Sbjct: 538 ---LIQAHDIFHRMVDAACY-PNAVTYSALIDGLC-KAG-----EIQKACEVYEKLIGTS 587
Query: 291 LEIQKDIY----------SGLIWLHSYQDNIDK-ERIS---LLKKEMQQAGFEEGKEVLL 336
++ D Y ++ + D + K +++S L M AG E + V
Sbjct: 588 GNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYD 647
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
+++ K G +++A++ +LR+ + + ++ K G ++++ EM
Sbjct: 648 ALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLND 707
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
+ +V Y +I+ L K E E +L+ E G P + +Y L + G D
Sbjct: 708 SCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADAS 767
Query: 457 HLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
F + K C PN Y + + AG +++A + + M
Sbjct: 768 LKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEM 809
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 144/356 (40%), Gaps = 30/356 (8%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E F++ + MM++ + D + TK+ ++ + +K K +F ++ G P T+ I
Sbjct: 434 EKAFQILKEMMRKGFVP-DTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTI 492
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
LI ++ A G +++A S ++ M + G P + +L A L L QA
Sbjct: 493 LIDSFCKA---GLIEQARSWFDEMRSV-GCSPNVVTYTALLHAY------LKSKQLIQAH 542
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK-----ERISLLKKEMQQAGFEEGKEVL 335
IFH ++ + YS LI I K E++ ++ + EG +
Sbjct: 543 DIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTC 602
Query: 336 LSVLRVC---------AKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFM 384
V K V DA + +L + G VY ++ + KIG+
Sbjct: 603 TIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAA--GCEPNQIVYDALIDGFCKIGKID 660
Query: 385 KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT 444
+ E+F M + SV Y +I+ + K +L ++ E + P + +Y +
Sbjct: 661 NAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMI 720
Query: 445 NMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+ +G ++ S EK C PN Y ++ L G + + ++F M+S
Sbjct: 721 DGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNS 776
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 143/336 (42%), Gaps = 24/336 (7%)
Query: 119 LCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAV--HCMRIRENETGFRVYEWMMQQHWY 176
+C S K V I A K + Y AV C + + T R++ M++Q
Sbjct: 163 ICAYGRSGKLAKAVEIFEAMKVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMS 222
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
T L G+ ++ +C IF ++ +G ++T++ LI Y G +
Sbjct: 223 PDRITFNT-LISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRG---GQMHL 278
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYL-QQAEFIFHNLLTSGLEIQK 295
++ M + G +P ++++ G +K L +A +F + +E
Sbjct: 279 GAALMETMAKSSGIEPSVITYSTMI-------DGYAKLGLAHEAIALFQEMRNQNVEPDG 331
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
Y+ ++ +H+ N D+ +++ M++AGF + ++L K+G +A
Sbjct: 332 ICYNTMVDIHARLGNFDEAHS--IRRAMEEAGFAKDIVTYNALLDSYGKQGKFREA---- 385
Query: 356 LRLLE--SDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
+ LLE G Y ++AY K G ++ +F+++++ V Y +++
Sbjct: 386 MSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDG 445
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
CK + +L++E + G++P + +Y +L + Y
Sbjct: 446 CCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAY 481
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 108/257 (42%), Gaps = 6/257 (2%)
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
A+ IF + +G +YS LI + + K ++ E + + V +V
Sbjct: 140 AQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAK---AVEIFEAMKVVCKPNLVVYNAV 196
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
+ C+K GD A + + +LE F + A + + + IF EM+ER
Sbjct: 197 IDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGI 256
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVE-TGMKPLMPSYINLTNMYLNLGM-HDRL 456
+ Y+ +I C+ + L +LM+ + +G++P + +Y + + Y LG+ H+ +
Sbjct: 257 ARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAI 316
Query: 457 HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
L + P+ Y ++ GN ++A I M + + + N +L +
Sbjct: 317 ALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAME-EAGFAKDIVTYNALLDS 375
Query: 517 YLSSGDFVKAEKIYDLM 533
Y G F +A + + M
Sbjct: 376 YGKQGKFREAMSLLEEM 392
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 150/340 (44%), Gaps = 18/340 (5%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
+RV+ + + Y D + T + + + F + R ++ +++++G P+ T++ ++
Sbjct: 317 AYRVFNDL-KDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTML 375
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
L + G + AC +YN M GY N + L S+ G S +A +
Sbjct: 376 HGSLKS---GDFERACELYNEMCN-KGYGTTTVTCNKIISELCSR--GKS----DEAFEV 425
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
F + +G++ Y+ LI + +D ER++LL + + Q L +++ C
Sbjct: 426 FKKMSETGIQADAITYNSLIRGFCKEGKVD-ERMNLLNELVAQDPQPSVSLYELLIIKSC 484
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSA 400
K+GD E A++ + S G+ A+ Y + K G+F E++ E +
Sbjct: 485 -KDGDFEAAKRLLGDM--SSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGT 541
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLA 459
+ +KII LC +++ + K+ ETG+K +Y +L + G + ++L
Sbjct: 542 TTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLL 601
Query: 460 FSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+ +P+ + Y + L G+ E A+ ++ M S
Sbjct: 602 NELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVS 641
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 106/230 (46%), Gaps = 6/230 (2%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAK 379
+++ G+ + + +++ + G +A K W ++ D G+ A+ Y + K
Sbjct: 323 DLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMM--DKGMQPNAYTYNTMLHGSLK 380
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
G+F ++ E++ EM + + +KII LC +++ + K+ ETG++ +
Sbjct: 381 SGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAIT 440
Query: 440 YINLTNMYLNLGMHD-RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
Y +L + G D R++L + +P+ ++Y + + G+ E A+ + M
Sbjct: 441 YNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDM- 499
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL 548
S + + N + + +L L SGDF ++Y+ C K Y +A K+
Sbjct: 500 SSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKI 549
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 110/277 (39%), Gaps = 41/277 (14%)
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
+D + + K AGF L ++ G +E+A + + +L E+ I A
Sbjct: 135 LDAKAVRAAKMVRDIAGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVAC 194
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI---IELLCKAEETELTESLMKE 427
+ K G+ E ++EM + G+AS + I+ C + + L+ +
Sbjct: 195 NSILSGCLKAGKTELLFEFYQEMI-KAGTASDANTETVGCLIQAFCDSGQVARGYELLNQ 253
Query: 428 FVETGMKPLMPSYINLTNMYLN----LGMHDRLHLAFS---------------------E 462
F++TG+ P P+Y L + M + LH + E
Sbjct: 254 FLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEE 313
Query: 463 CLEKCR-----------PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
CLE R P+R +Y + L G+ +A +++ M D+ + N + N
Sbjct: 314 CLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMM-DKGMQPNAYTYN 372
Query: 512 IILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL 548
+L L SGDF +A ++Y+ MC K Y + K+
Sbjct: 373 TMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKI 409
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 102/237 (43%), Gaps = 16/237 (6%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
++F + G +T++ LI + +G +DE ++ N ++ P+PS+ SL
Sbjct: 424 EVFKKMSETGIQADAITYNSLIRGFCK---EGKVDERMNLLNELV---AQDPQPSV--SL 475
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
+ L+ K + + A+ + ++ + GL + Y+ LH + D E + L
Sbjct: 476 YELLIIKSCKDGDF--EAAKRLLGDMSSKGL--HPNAYTYDTMLHGSLKSGDFEHVRELY 531
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
E G+ ++ G ++A + + ++ S+ GI A Y + +
Sbjct: 532 NETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKM--SETGIKADAITYNSLIRGFC 589
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
K G+ KS+ + E+ + S +Y +I LC+ + E + L + V G++P
Sbjct: 590 KEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEP 646
>gi|125564557|gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
Length = 544
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 155/387 (40%), Gaps = 32/387 (8%)
Query: 181 ALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSI 240
AL + D + K F R + D++ + S LI Y+ A + EA +
Sbjct: 146 ALYAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPS---EASDL 202
Query: 241 YNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSG 300
+ RM + G P P+ SL G LSK L + S +Y+
Sbjct: 203 FRRMEEYGAGAPDPATLASLL-------GALSKKRLASEAQAMFDSYKSVFTPDVVLYTT 255
Query: 301 LIWLHSYQDNIDK-ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
L+ +D+ ER+ EMQQAG +V+ + G V A++ +++
Sbjct: 256 LVHAWCRSGRLDEAERVF---AEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMI 312
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
+S T F M A+ K G + L++ +M++ + Y+ ++E C ++
Sbjct: 313 DSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSN 372
Query: 420 LTES--LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGI 476
L + ++ + G P ++ + + L LG + + E +C+PN Y +
Sbjct: 373 LDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNL 432
Query: 477 YLESLKNAGNIEKAEEIFNHMHSD---QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ N+EK+ ++ + D Q + N + ++ A+ G++ +A M
Sbjct: 433 LMRLF----NLEKSMDMVLRIKRDMDAQGVEPNVNTYAALIEAFCGRGNWKRAH-----M 483
Query: 534 CLKKYEIESAWMEK---LDYVLSLNRK 557
L++ E A D VL+L RK
Sbjct: 484 TLREMVEEKALKPTKPVYDMVLALLRK 510
>gi|326529783|dbj|BAK04838.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 128/288 (44%), Gaps = 17/288 (5%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
PS ++++++I + +G + +AC +++ MIQ GY P +NS+ AL
Sbjct: 203 PSVVSYNLVIHGFFK---EGEISKACHLFHGMIQ-QGYVPDVVTYNSVINALCKARA--- 255
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ +AE + +++ + ++ Y+ LI + + KE LLK M+ G
Sbjct: 256 ---MDKAEVVLRSMVHNSVQPDAVTYNSLIHGYLILGQL-KETFRLLKV-MRSQGVMPSL 310
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIF 390
SV+ K G +++AE+ + + NG +Y + YA G +K +++
Sbjct: 311 VTCSSVMDYLCKHGKIKEAEEMFYS--RAVNGRKPDIVLYSIMLHGYAIEGSLVKMIDLC 368
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
M +P ++ +I K ++ ++ ++ G+KP +Y+ + + + +
Sbjct: 369 EVMARDGVVPDLPCFNILINAYAKYGMMDVAMLFFEDMLKQGVKPNEFTYLTVISAFCKM 428
Query: 451 GMHDRLHLAFSECLEKCRPNRT-IYGIYLESLKNAGNIEKAEEIFNHM 497
G D FSE ++ P T +Y +E N G+ KAEE M
Sbjct: 429 GRMDDAMEKFSEMIDMGVPLDTEVYMCMVEGYLNHGDSMKAEEFITKM 476
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 356 LRLLESDNGIPTPAFV---YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
LR++ +P+ V + + K GE K+ +F M ++ V Y+ +I L
Sbjct: 191 LRMMAEKGAEHSPSVVSYNLVIHGFFKEGEISKACHLFHGMIQQGYVPDVVTYNSVINAL 250
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNR 471
CKA + E +++ V ++P +Y +L + YL LG + + L + P+
Sbjct: 251 CKARAMDKAEVVLRSMVHNSVQPDAVTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSL 310
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
++ L G I++AEE+F + VN R +I+L Y
Sbjct: 311 VTCSSVMDYLCKHGKIKEAEEMF------YSRAVNGRKPDIVL---------------YS 349
Query: 532 LMCLKKYEIESAWMEKLDYVLSLNRKEV 559
+M L Y IE + ++ +D + R V
Sbjct: 350 IM-LHGYAIEGSLVKMIDLCEVMARDGV 376
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/420 (20%), Positives = 166/420 (39%), Gaps = 49/420 (11%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG--GYQPRPSLHNS 259
+ ++++ G VP+E L+ +G +D A Y+ +++LG G+ P ++N+
Sbjct: 310 LMNEMVELGFVPTEAAVSGLVDGLRK---KGNIDSA---YDLVVKLGRFGFLPNLFVYNA 363
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
L AL L +AE ++ N+ + L + YS LI + +D
Sbjct: 364 LINALCKGED------LDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYF- 416
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAK 379
M + G E S++ K GD+ AE + +++ F + Y K
Sbjct: 417 -GRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCK 475
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
+ K+ +++REM E+ + SV + +I LC E L E VE +KP +
Sbjct: 476 DLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVT 535
Query: 440 YINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
Y + Y D+ + L P+ Y + L + G + A++ + +H
Sbjct: 536 YNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLH 595
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKE 558
+ + +N + +L Y G +A LS + +
Sbjct: 596 K-KNLKLNEMCYSALLHGYCGQGRLTEA-------------------------LSASCEM 629
Query: 559 VKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQY 618
+++ ++++L +L+ G + D KR +++ +++ R SV+ + D Y
Sbjct: 630 IQRGINMDLVCH------AVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAY 683
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 148/383 (38%), Gaps = 69/383 (18%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E F++Y M ++ + T L + + A+ +FD+++ + P+E+T+++
Sbjct: 480 EKAFKLYREMNEKEIAPSVYTF-TALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNV 538
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL------FRALVSKPGGLSKY 274
+I Y A +D+A + M LHN L +R L+S G S
Sbjct: 539 MIEGYCKAHN---MDKAFELLEDM-----------LHNGLVPDTYTYRPLIS--GLCSTG 582
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
+ A+ +L L++ + YS L LH Y EM Q G
Sbjct: 583 RVSAAKDFIDDLHKKNLKLNEMCYSAL--LHGYCGQGRLTEALSASCEMIQRGINMDLVC 640
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLES--DNGIPTPAFVYK--MEAYAKIGEFMKSLEIF 390
++ K+ D+ K LL+ D G+ + +Y ++AY+K G F KS E
Sbjct: 641 HAVLIDGAMKQQDM----KRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECL 696
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
M +V Y + LCK E + L ++ + + P
Sbjct: 697 DLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISP--------------- 741
Query: 451 GMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC 510
N YG +L+SL GN+++A ++ + M + + NT +
Sbjct: 742 -------------------NSVTYGCFLDSLTKEGNMKEATDLHHEML--KGLLANTATY 780
Query: 511 NIILSAYLSSGDFVKAEKIYDLM 533
NI++ + G ++A K+ M
Sbjct: 781 NILIRGFCKLGRLIEATKVLSEM 803
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 143/354 (40%), Gaps = 30/354 (8%)
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK 273
+++T+ ILI ++ +G LD A S + RMI+ G + +NSL K G LS
Sbjct: 392 NDVTYSILIDSFCK---RGMLDVAESYFGRMIE-DGIRETIYPYNSLINGHC-KFGDLS- 445
Query: 274 YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKE 333
AEF++ ++ GLE ++ LI Y ++ E+ L +EM +
Sbjct: 446 ----AAEFLYTKMINEGLEPTATTFTTLI--SGYCKDLQVEKAFKLYREMNEKEIAPSVY 499
Query: 334 VLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREM 393
+++ ++ +A K + ++E + +E Y K K+ E+ +M
Sbjct: 500 TFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDM 559
Query: 394 QERLGSASVP---AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
L + VP Y +I LC + + + + +K Y L + Y
Sbjct: 560 ---LHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQ 616
Query: 451 GMHDRLHLAFSECLEKCRP----NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN 506
G RL A S E + + + + ++ ++++ + M+ DQ + +
Sbjct: 617 G---RLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMY-DQGLRPD 672
Query: 507 TRSCNIILSAYLSSGDFVKAEKIYDLM----CLKKYEIESAWMEKLDYVLSLNR 556
+ ++ AY G F K+ + DLM C +A+M L V ++R
Sbjct: 673 SVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDR 726
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 68/353 (19%), Positives = 141/353 (39%), Gaps = 30/353 (8%)
Query: 194 RKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPR 253
RKF ++FD+ +N G P T +I + L + C +++ + +
Sbjct: 197 RKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCE------LKDFCRAKEKILWMESNRFD 250
Query: 254 PSL--HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW----LHSY 307
S+ +N L L G L ++++ L GL+ Y L+ + +
Sbjct: 251 LSIVTYNVLIHGLCKGGGVLEALEVRKS------LREKGLKEDVVTYCTLVLGFCRVQQF 304
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
D I L EM + GF + + ++ K+G+++ A ++L G
Sbjct: 305 DDGI------CLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKL--GRFGFLP 356
Query: 368 PAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
FVY + A K + K+ +++ M + Y +I+ CK ++ ES
Sbjct: 357 NLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYF 416
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNA 484
+E G++ + Y +L N + G +++ + E P T + +
Sbjct: 417 GRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKD 476
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
+EKA +++ M+ ++ I + + ++ S+ + +A K++D M +K
Sbjct: 477 LQVEKAFKLYREMN-EKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERK 528
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 141/309 (45%), Gaps = 19/309 (6%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D KE K A+ DI +++I+ G P+++ + LI G L A + N MI
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKI---GQLGRASKLLNEMI 412
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF-IFHNLLTSGLEIQKDIYSGLIWL 304
++G ++P ++ L + G ++Y + F + + + SG I + Y+ I +
Sbjct: 413 KVG-HRPDTFTYHPLMQ-------GHFQHYDKDGAFELLNEMRNSG--ILPNAYTYGIMI 462
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
+ N + + L +EM G + + ++ +KEG + A ++ + ++ N
Sbjct: 463 NGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKA-NV 521
Query: 365 IPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+P F Y ++ + +G ++ E + ++Q+R Y +I CK E +
Sbjct: 522 LPD-LFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKAD 580
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESL 481
L+++ + +G+KP +Y +L Y H+++ L +P+ IYGI + +L
Sbjct: 581 QLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNL 640
Query: 482 KNAGNIEKA 490
+ N+E A
Sbjct: 641 SRSENMEVA 649
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 134/321 (41%), Gaps = 39/321 (12%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K R F + +F+++ + +E+T++++I + G ++EA M+ G
Sbjct: 257 KARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRS---GAVEEAFGFKEEMVDY-GLS 312
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P + +L L GG L++A+ + + SGL+ +Y+ L+ D
Sbjct: 313 PDAFTYGALMNGLCK--GG----RLKEAKALLDEMSCSGLKPNVVVYATLV------DGF 360
Query: 312 DKERISL----LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
KE + + EM AG + K + +++R K G + A K +++ + T
Sbjct: 361 MKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDT 420
Query: 368 ----PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
P + Y K G F E+ EM+ + Y +I LC+ E++ +
Sbjct: 421 FTYHPLMQGHFQHYDKDGAF----ELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGN 476
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS-ECLEKCR-----PNRTIYGIY 477
L++E + G+KP Y L +G H++ + E LE P+ Y
Sbjct: 477 LLEEMISEGLKPNAFMYAPLI-----IGHSKEGHISLACESLENMTKANVLPDLFCYNSL 531
Query: 478 LESLKNAGNIEKAEEIFNHMH 498
++ L G IE+AEE + +
Sbjct: 532 IKGLSTVGRIEEAEEYYAQVQ 552
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 104/257 (40%), Gaps = 14/257 (5%)
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
GIP + Y +EA+ K +F + ++F EM+ R + + Y+ +I LC++ E
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 299
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE-CLEKCRPNRTIYGIYLES 480
+E V+ G+ P +Y L N G E +PN +Y ++
Sbjct: 300 FGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDG 359
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEI 540
G +A +I N M S + N + ++ G +A K+ + M +
Sbjct: 360 FMKEGKAAEAFDILNEMIS-AGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRP 418
Query: 541 ESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLI-------GLLLGGLCIESDEKRKR 593
++ L + + + K + L +E R + I G+++ GLC + K
Sbjct: 419 DTFTYHPL---MQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475
Query: 594 HMIRFQFNENSRMHSVL 610
+++ +E + ++ +
Sbjct: 476 NLLEEMISEGLKPNAFM 492
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 1/180 (0%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA 378
LK M+ AG + L K D + A+K + + D + + +
Sbjct: 232 LKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLC 291
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
+ G ++ EM + S Y ++ LCK + ++L+ E +G+KP +
Sbjct: 292 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVV 351
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
Y L + ++ G +E + +PN+ +Y + L G + +A ++ N M
Sbjct: 352 VYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEM 411
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 144/338 (42%), Gaps = 22/338 (6%)
Query: 194 RKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG--GYQ 251
++F + D+++ G P+E L+ QG +D+A Y ++++G G+
Sbjct: 309 QQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRK---QGKIDDA---YELVVKVGRFGFV 362
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P ++N+L +L K G L K AE ++ N+ L YS LI +
Sbjct: 363 PNLFVYNALINSLC-KGGDLDK-----AELLYSNMSLMNLRPNGITYSILIDSFCRSGRL 416
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI-PTPA- 369
D IS + M Q G E S++ K GD+ AE ++ + ++ G+ PT
Sbjct: 417 DVA-ISYFDR-MIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEM--TNKGVEPTATT 472
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
F + Y K + K+ +++ +M + + +V + +I LC + L E V
Sbjct: 473 FTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELV 532
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIE 488
E +KP +Y L Y G D+ + +K P+ Y + L + G +
Sbjct: 533 ERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVS 592
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
KA++ + +H Q + +N + +L Y G ++A
Sbjct: 593 KAKDFIDDLHK-QNVKLNEMCYSALLHGYCQEGRLMEA 629
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 154/378 (40%), Gaps = 67/378 (17%)
Query: 161 ETGFRVYEWMMQQ----HWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEM 216
+ F++Y M+ + Y F T L + K A+ ++FD+++ + P+E+
Sbjct: 487 QKAFKLYNKMIDNGITPNVYTF-----TALISGLCSTNKMAEASELFDELVERKIKPTEV 541
Query: 217 TFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYL 276
T+++LI Y G +D+A + M Q G P + L L S G +SK
Sbjct: 542 TYNVLIEGYCR---DGKIDKAFELLEDMHQ-KGLVPDTYTYRPLISGLCS-TGRVSK--- 593
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVL 335
A+ +L +++ + YS L LH Y Q+ E +S EM Q G
Sbjct: 594 --AKDFIDDLHKQNVKLNEMCYSAL--LHGYCQEGRLMEALS-ASCEMIQRGINMDLVCH 648
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLES--DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFR 391
++ K+ D KT+ LL+ D G+ +Y ++ Y+K G F K+ E +
Sbjct: 649 AVLIDGALKQPD----RKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWD 704
Query: 392 EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
M +V Y ++ LCKA E + L K
Sbjct: 705 LMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFK------------------------- 739
Query: 452 MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
R+ A PN YG +L++L GN+++A + + M + + NT + N
Sbjct: 740 ---RMQAA------NVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML--KGLLANTVTHN 788
Query: 512 IILSAYLSSGDFVKAEKI 529
II+ + G F +A K+
Sbjct: 789 IIIRGFCKLGRFHEATKV 806
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 144/365 (39%), Gaps = 51/365 (13%)
Query: 206 IINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV 265
I+ G P TF LI V+G + EA ++++MI G+QP + +L L
Sbjct: 106 ILKLGHQPDATTFTTLIRGLC---VEGKIGEALHLFDKMIG-EGFQPNVVTYGTLINGLC 161
Query: 266 SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
+ +A IF ++T G+ Y+ LI H + + ++ L EM
Sbjct: 162 KD------RQVTEAFNIFSEMITKGISPNIVTYNSLI--HGLCKLCEWKHVTTLMNEMVD 213
Query: 326 AGFEEGKEVLLSVLRVCAKEG-----------------------------------DVED 350
+ L +V+ KEG +V+
Sbjct: 214 SKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV 273
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
A K + ++ D ++ + Y KI K++ +F EM + + + Y+ +I
Sbjct: 274 AVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIH 333
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-- 468
LC + SL E V G P + +Y L++ YL H +A + +E
Sbjct: 334 GLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSD-YLCKNRHLDKAMALLKAIEGSNWD 392
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
P+ IY L+ + AG +E A ++F+++ S + + N + NI++ G +A K
Sbjct: 393 PDIQIYTTILDGMCRAGELEDARDLFSNL-SSKGLQPNVWTYNIMIHGLCKQGLLAEASK 451
Query: 529 IYDLM 533
++ M
Sbjct: 452 LFSEM 456
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 137/334 (41%), Gaps = 43/334 (12%)
Query: 214 SEMTFHILIVAYLSAPVQ-GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
S TFH S P+ LDEA S +NRM+ QP PS + F L++
Sbjct: 12 SHNTFH-------SKPLHFNTLDEALSTFNRMLH---KQPPPSTVD--FNRLLT------ 53
Query: 273 KYYLQQAEFIFHNLLTS------GLEIQKDIYSGLIWLHS--YQDNIDKERISLLKKEMQ 324
A+ H+ L S I D+Y+ I ++S + + +D +L K +
Sbjct: 54 ----SIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAK--IL 107
Query: 325 QAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFM 384
+ G + +++R EG + +A + +++ + + K +
Sbjct: 108 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVT 167
Query: 385 KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT 444
++ IF EM + S ++ Y+ +I LCK E + +LM E V++ + P + + +
Sbjct: 168 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 227
Query: 445 NMYLNLGM----HDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM-HS 499
+ GM HD + + +E PN Y ++ ++ A ++F+ M H
Sbjct: 228 DALCKEGMVAEAHDVVDMMIHRGVE---PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 284
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
D N S N +++ Y KA +++ M
Sbjct: 285 DCV--ANVISYNTLINGYCKIQSVDKAMYLFEEM 316
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 156/368 (42%), Gaps = 13/368 (3%)
Query: 134 ILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFA-LATKLADYMGK 192
+L+ + K +D TY+ E + YE+ +++ + + LA+ + +G+
Sbjct: 186 MLSFESKLCGSDDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGR 245
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
K + IF+ G + F LI AY + G +EA S++N M + Y
Sbjct: 246 YGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRS---GLHEEAISVFNSMKE---YGL 299
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
RP+L + A++ G + Q A+F F + +G++ + ++ L+ + S +
Sbjct: 300 RPNL--VTYNAVIDACGKGGMEFKQVAKF-FDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
R L EM E+ ++L K G ++ A + ++ ++
Sbjct: 357 AARN--LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++ +AK G F ++L +F EM+ + +Y+ ++ + K +E +++E G
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAE 491
+K + +Y L Y G +D + F+E E PN Y ++ G ++A
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 492 EIFNHMHS 499
EIF S
Sbjct: 535 EIFREFKS 542
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 86/175 (49%), Gaps = 4/175 (2%)
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+F + G+ + + Y+ L+ +++ + +E + +L+ EM G ++ ++L
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYT-KVGRSEEALDILR-EMASVGIKKDVVTYNALLGG 488
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
K+G ++ +K + + + ++ +P + ++ Y+K G + +++EIFRE + A
Sbjct: 489 YGKQGKYDEVKKVFTEM-KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRA 547
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
V Y +I+ LCK SL+ E + G+ P + +Y ++ + + DR
Sbjct: 548 DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDR 602
>gi|195613918|gb|ACG28789.1| leaf protein [Zea mays]
Length = 637
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 153/360 (42%), Gaps = 30/360 (8%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + +R F + ++ G P + F+ LI A++ A G EA + + +
Sbjct: 106 TILLTALTNQRMFESIPSLLAEVELAGVRPDSIFFNALINAFVEAKRMG---EAINTFWK 162
Query: 244 MIQLGGYQPRPSLHNSLFRA--LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
M + G P S N+L + +V KP ++++ +F + G ++ ++ +
Sbjct: 163 M-KHSGCHPTTSTFNTLIKGYGIVGKP--------EESQRVFDMMGVEG-SVRPNLTTYN 212
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE------KTW 355
I + ++ D+ + E + +MQ GFE ++ A + AE +T
Sbjct: 213 ILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETWRAEELIVEIQTR 272
Query: 356 LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
+R E GI + Y + G ++L ++M++ +V ++ +++ A
Sbjct: 273 VRTSERTWGI-------IIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDA 325
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIY 474
+ ++ + G+KP + +Y + N + +LG + F + +E P+ +Y
Sbjct: 326 NDMAAVNKILGLMKKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVY 385
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
I + A EKAE++ M S + N + ++S + S D A ++YD MC
Sbjct: 386 SILAKGFVRAQQPEKAEDLLLQM-SHLGLCPNVVTFTTVISGWCSVADMESAMRVYDKMC 444
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 141/336 (41%), Gaps = 48/336 (14%)
Query: 213 PSEMTFHIL-------------IVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSL-HN 258
PS TF I+ I +LS GC + S +N ++ + R + +N
Sbjct: 145 PSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHS-FNTILDILCKSKRVEMAYN 203
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
+LF+ L K +A+ + +N++ +G + K L L
Sbjct: 204 NLFKVLRGK---------FKADVVSYNIIANGWCLIKRTPKALEVL-------------- 240
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA 378
KEM + G +L+ + G +++A + +L++ E + I + + +
Sbjct: 241 --KEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFG 298
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
+GE ++ ++F EM S Y+ +I++LCK + E + +E V+ G P +
Sbjct: 299 VVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLT 358
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECL--EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+Y + + G D+ + F E + + C PN Y + + +AG++EK +F
Sbjct: 359 TYNVVIRGLFHAGNMDK-AMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEK 417
Query: 497 MHSDQTIGVNTRSCNIILSAYL---SSGDFVKAEKI 529
M ++T N+++SA S D V A K+
Sbjct: 418 MGQGSLPNLDTY--NVLISAMFVRKKSEDLVVAGKL 451
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 88/192 (45%), Gaps = 5/192 (2%)
Query: 346 GDVEDAEKTWL---RLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
G + D + W R+ G + F E + G+ +++++F M+E +
Sbjct: 123 GRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDL 182
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
+++ I+++LCK++ E+ + + + + K + SY + N + + + E
Sbjct: 183 HSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKE 242
Query: 463 CLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
+E+ P T Y I L+ AG +++A E F M ++ + ++ + ++ + G
Sbjct: 243 MVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQM-KEREVEIDVVTYTTMVHGFGVVG 301
Query: 522 DFVKAEKIYDLM 533
+ +A K+++ M
Sbjct: 302 EIKRARKVFNEM 313
>gi|297792331|ref|XP_002864050.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
gi|297309885|gb|EFH40309.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
Length = 723
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 117/252 (46%), Gaps = 9/252 (3%)
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
IF + G++ +D++ GL+ S+ D KE +++ EM++ G V +++
Sbjct: 331 IFEKMSDKGVKWSQDVFGGLV--KSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDA 388
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGS 399
K +E+ E + + G+ A Y M+AYA+ + + REM++
Sbjct: 389 YNKSNHIEEVEGLFAEI--KAKGLKPTAATYNILMDAYARRMQPDIVETLLREMEDLGLE 446
Query: 400 ASVPAYHKIIELLCKAEE-TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
+V ++ +I + ++ +++ + G+KP SY L + Y G H++ +
Sbjct: 447 PNVKSFTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYA 506
Query: 459 AFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
+F E +E +P+ Y L++ + +G+ EK EI+ M ++ G + N +L +
Sbjct: 507 SFEEMWMEGIKPSVETYTSLLDAFRRSGDTEKLMEIWKLMLREKIKGTRI-TYNTLLDGF 565
Query: 518 LSSGDFVKAEKI 529
G +++A +
Sbjct: 566 AKQGLYIEARDV 577
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 147/369 (39%), Gaps = 23/369 (6%)
Query: 82 FDVGTAGSEMRHLGEPVVEVIELEELPEQWRRAKLAWLCKELPSHKGGTLVRILNAQKKW 141
++V A +++ + V I + + + R AK W E S KG KW
Sbjct: 293 WEVYEAMNKINVFPDNVTCAIMITTMRKAGRSAKEVWEIFEKMSDKG----------VKW 342
Query: 142 LRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRD 201
+ G + C + E V + M++ R + + L D K +
Sbjct: 343 SQDVFGGLVKSFCDEGLKEEA--LVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEG 400
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F +I +G P+ T++IL+ AY + +Q + E ++ M LG P++ + F
Sbjct: 401 LFAEIKAKGLKPTAATYNILMDAY-ARRMQPDIVE--TLLREMEDLG---LEPNVKS--F 452
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L+S G K A+ F + GL+ Y+ LI H+Y + E+ +
Sbjct: 453 TCLISAYGRTKKMSDMAAD-AFLRMKKVGLKPSSHSYTALI--HAYSVSGWHEKAYASFE 509
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
EM G + E S+L + GD E + W +L + ++ +AK G
Sbjct: 510 EMWMEGIKPSVETYTSLLDAFRRSGDTEKLMEIWKLMLREKIKGTRITYNTLLDGFAKQG 569
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
++++ ++ E + SV Y+ ++ + + L+KE +KP +Y
Sbjct: 570 LYIEARDVVSEFGKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYS 629
Query: 442 NLTNMYLNL 450
+ ++ +
Sbjct: 630 TMIYAFVRV 638
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 9/255 (3%)
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
A F ++ +G+E Y+ LI H+Y D +EM+ G
Sbjct: 209 HSARAAFESMRAAGIEPNVHSYTNLI--HAYAVAQDLRGAIACVEEMEAEGVSPNAATYS 266
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
++ + GDVE AE+ + R L + + + AY K G ++ I M+E+
Sbjct: 267 VIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQ 326
Query: 397 LGSASVPAYHKIIE--LLCKAEETELTE-SLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
A++ Y+ +++ + C+A + L +K ETG+ P + SY L N+Y LG
Sbjct: 327 GLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKM 386
Query: 454 DRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
D+ L S +E + NR Y + ++ G+ A +F M S+ I + + N
Sbjct: 387 DKA-LQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDM-SNAGIKPDGITYN 444
Query: 512 IILSAYLSSGDFVKA 526
I+++A+ +G +A
Sbjct: 445 ILMNAFCKNGQMNRA 459
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 151/382 (39%), Gaps = 18/382 (4%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R+ + E R ++ + ++W+ D + Y K + I + QG +
Sbjct: 274 RLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYC-KAGNMERAEAIMTAMEEQGLEATL 332
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG--GYQPRPSLHNSLFRALVSKPGGLSK 273
+++L+ Y+ +D+ +++ R+ G P + L L SK G + K
Sbjct: 333 GLYNMLMDGYVHCRA---VDKCLNVFRRLKARTETGLSPTVVSYGCLIN-LYSKLGKMDK 388
Query: 274 YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKE 333
A I + + G++ + YS +I Y D + ++M AG +
Sbjct: 389 -----ALQISNEMEDQGIKHNRKTYSMII--DGYVQLGDTANAFSVFEDMSNAGIKPDGI 441
Query: 334 VLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT-PAFVYKMEAYAKIGEFMKSLEIFRE 392
++ K G + A + R+ ES + PT + ++ + KIG+ + E R+
Sbjct: 442 TYNILMNAFCKNGQMNRALELLARM-ESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRD 500
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
M+ S Y+ I+ L +A + + S++ E V G+ P SY L Y +G
Sbjct: 501 MKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGD 560
Query: 453 HDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
F+ E +P+ Y L++ AG ++ I M + + +N N
Sbjct: 561 MGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAA-AGVPMNNYIYN 619
Query: 512 IILSAYLSSGDFVKAEKIYDLM 533
I+L + GD +A I M
Sbjct: 620 ILLDGWAQRGDMWEASDIMQKM 641
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/407 (18%), Positives = 172/407 (42%), Gaps = 36/407 (8%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
C R E E RV+E +++ + A + D + K F + D+++ ++ P
Sbjct: 239 CFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQP 298
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL--VSKPGGL 271
+T+ +I + +D A +Y+ MI+ G P ++NSL + + G
Sbjct: 299 DMITYGTMIHGLCRSTD---VDSAARVYSEMIKT-GLVPDVVIYNSLLKGFCHAGRVGEA 354
Query: 272 SKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI------W-LHSYQDNIDKERI--SLLKKE 322
K++ + N+ + + ++ G++ W L D++ + + S +
Sbjct: 355 WKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHG 414
Query: 323 MQQAGFEE------------GKEV----LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
+ + GF GKE+ S++ K+G ++DA K + ++ S +
Sbjct: 415 LCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKI--SMDSFK 472
Query: 367 TPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
+ +Y + + + +F ++ ++ +M E S + Y+ +I LCKAE+
Sbjct: 473 PNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRF 532
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKN 483
+E +E G + +Y +L D +++ L+K + + ++ I + L +
Sbjct: 533 TREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCS 592
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
AG +++A ++ + M N + N ++ + +G F KA ++
Sbjct: 593 AGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLW 639
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 110/257 (42%), Gaps = 17/257 (6%)
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P +N + R+L + L +A +F +L GL + YS L + + N
Sbjct: 157 PNLQTYNIMLRSLCVRGD------LDRAVTLFDSLRCRGLAPDRITYSTL--MSGFVKNN 208
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA-F 370
+ L EM + ++L C + G+ E A + W +L+ P A +
Sbjct: 209 RLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATY 268
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
++ K+G F ++ +++ M + Y +I LC++ + + + E ++
Sbjct: 269 NVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIK 328
Query: 431 TGMKPLMPSYINLTNMYLNLGMHDRLHLAF----SECLEKCRPNRTIYGIYLESLKNAGN 486
TG+ P + Y +L + + G R+ A+ S + R N T Y I L+ L + G
Sbjct: 329 TGLVPDVVIYNSLLKGFCHAG---RVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGM 384
Query: 487 IEKAEEIFNHMHSDQTI 503
++KA +++ + D ++
Sbjct: 385 VDKATDLWELLEKDDSL 401
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 119/292 (40%), Gaps = 21/292 (7%)
Query: 232 GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGL 291
G +D+A ++ + + P +++ L K G + LQ I TSG
Sbjct: 383 GMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEK--GFANKSLQ----ILEEARTSGK 436
Query: 292 EIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
E+ + YS +I +D + + L +K + F+ + +++ + DA
Sbjct: 437 ELDEFSYSSMISGLCKDGRLD-DAVKLYEK-ISMDSFKPNSHIYNALINGFCQASKFSDA 494
Query: 352 EKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
+ + ++ E+D T + + K +++++ REM E+ V Y +I
Sbjct: 495 IRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRG 554
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRP 469
LC+ ++ + +L + ++ G++ + + L + + G D SE EK C P
Sbjct: 555 LCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCP 614
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIF-----NHMHSDQTIGVNTR-----SCN 511
N Y ++ G +KA ++ N + D I NTR SCN
Sbjct: 615 NVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPD-IISYNTRIKGLCSCN 665
>gi|414888267|tpg|DAA64281.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 873
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/477 (19%), Positives = 176/477 (36%), Gaps = 85/477 (17%)
Query: 129 GTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLAD 188
G++ R L + L +D + R + + R++++M +Q W R D + +
Sbjct: 88 GSIARCLETARHRLTLQDFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAIVIG 147
Query: 189 YMGKERK--FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQ 246
+G++ KC ++F D+ + R + +++ LI AY + +EA ++ ++M +
Sbjct: 148 VLGRQGPALLDKCLEVFHDLPAESR--TALSYTSLIAAYARNALH---EEARALLDQM-K 201
Query: 247 LGGYQPRPSLHNSLFRALV----------------------SKPG---GLSKY------- 274
G P + +N++ A + P L+ Y
Sbjct: 202 ATGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAA 261
Query: 275 ----YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE 330
Q+E + H +L +G+ Y ++ + N+ R + L EM G
Sbjct: 262 AVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDAFASAGNL--SRAAELFSEMAATGHTA 319
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEI 389
L ++ + G DA LR +++D PT A + ++ Y + G F ++
Sbjct: 320 DASAYLGLMEAHTRVGATADAVAV-LRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQL 378
Query: 390 FREMQERLGSASVPAYHKIIELLCKA----EETELTESLMKEFVET-------------- 431
FREM+ + Y+ + + E EL ++K V+
Sbjct: 379 FREMRTAV-PPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGH 437
Query: 432 -----------------GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTI 473
GM P +Y L + M++ ++AF+ E P
Sbjct: 438 GGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLET 497
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
Y + G ++AE IF+ M ++ I + S + ++ AY A K Y
Sbjct: 498 YNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAY 554
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 17/232 (7%)
Query: 199 CRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN 258
R++ + + +G VP+ + L+ A A + +EA +N M ++G P +N
Sbjct: 444 AREVLEYMTREGMVPTADAYTGLVEALGHAAM---YEEAYVAFNMMTEIGSL-PTLETYN 499
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLT-SGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
+L A GGL Q+AE IF + +G++ KD + LI + +D +
Sbjct: 500 AL--AFAYARGGL----FQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKA 553
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
+ EM+++ F + L VL G ++++++ + L S A+ + Y
Sbjct: 554 YM--EMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLY 611
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
A+ + + ++ EM+ S++ H++I L K E + + M E+V
Sbjct: 612 ARNDRWTDAYDLLEEMKTNRASST----HQVIASLIKGEYDDSSNWQMVEYV 659
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 160/398 (40%), Gaps = 61/398 (15%)
Query: 169 WMMQQHWYR-----FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIV 223
W M Q R A +++ +GK + K +F I ++ P+ T++ +I+
Sbjct: 115 WKMIQEMVRSPTCVIGPADLSEVVKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMIL 174
Query: 224 AYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIF 283
+ +G ++ +Y+ M G P ++ L A V G Y ++ +F
Sbjct: 175 MLMQ---EGHHEKIHELYHEMCNEGDCFPDTMTYSVLVSAFVKL--GRDDYAIR----LF 225
Query: 284 HNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCA 343
+ +GL IY+ L+ + Y + D++ + L++ EM+ G +++
Sbjct: 226 DEMKANGLHPTAKIYTTLLAI--YFKSGDEKALGLVQ-EMKDKGCAPTVFTYTELIKGLG 282
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKM-EAYAKIGEFMKSLEIFREMQERLGSASV 402
K G VEDA +L +L+ D P + + + K G +L++F +M+ + +V
Sbjct: 283 KSGRVEDAYSVFLNMLK-DGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNV 341
Query: 403 PAYHKIIELL------------------------------------CKAEETELTESLMK 426
Y+ +I+ L CK E L++
Sbjct: 342 VTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLE 401
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAG 485
E E G P +Y +L N ++ + F E E C R + IY + +++L G
Sbjct: 402 EMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCG 461
Query: 486 NIEKAEEIFNHMHSDQTIGVN--TRSCNIILSAYLSSG 521
+A ++FN M + IG N + N ++S + +G
Sbjct: 462 RPSEAVDLFNEM---KKIGCNPDVYAYNALMSGLVRAG 496
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 141/356 (39%), Gaps = 46/356 (12%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T+L +GK + +F +++ G P + + LI + A G L++A ++++
Sbjct: 275 TELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKA---GRLEDALKLFDQ 331
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M L P +N++ +AL SK +A F + +G+ YS LI
Sbjct: 332 MRSLK-CAPNVVTYNTVIKALFE-----SKAPASEAASWFEKMKANGVTPSSFTYSILID 385
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ + E+ LL +EM + GF S++ K E A + +L L E+
Sbjct: 386 GFCKTNRV--EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCG 443
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
+ ++ K G +++++F EM++ + V AY+ ++ L +A E S
Sbjct: 444 RSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFS 503
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKN 483
++ E G C P+ + I L L
Sbjct: 504 ALRTMEENG----------------------------------CTPDLNSHNIILNGLAR 529
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
G E+A E+F M D I + S N IL + SG F +A K+ M + +E
Sbjct: 530 TGRPEQATEMFMKMK-DSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFE 584
>gi|226533082|ref|NP_001141414.1| uncharacterized protein LOC100273524 [Zea mays]
gi|194704512|gb|ACF86340.1| unknown [Zea mays]
Length = 637
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 153/360 (42%), Gaps = 30/360 (8%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + +R F + ++ G P + F+ LI A++ A G EA + + +
Sbjct: 106 TILLTALTNQRMFESIPSLLAEVELAGVRPDSIFFNALINAFVEAKRMG---EAINTFWK 162
Query: 244 MIQLGGYQPRPSLHNSLFRA--LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
M + G P S N+L + +V KP ++++ +F + G ++ ++ +
Sbjct: 163 M-KHSGCHPTTSTFNTLIKGYGIVGKP--------EESQRVFDMMGVEG-SVRPNLTTYN 212
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE------KTW 355
I + ++ D+ + E + +MQ GFE ++ A + AE +T
Sbjct: 213 ILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETWRAEELIVEIQTR 272
Query: 356 LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
+R E GI + Y + G ++L ++M++ +V ++ +++ A
Sbjct: 273 VRTSERTWGI-------IIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDA 325
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIY 474
+ ++ + G+KP + +Y + N + +LG + F + +E P+ +Y
Sbjct: 326 NDMAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVY 385
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
I + A EKAE++ M S + N + ++S + S D A ++YD MC
Sbjct: 386 SILAKGFVRAQQPEKAEDLLLQM-SHLGLCPNVVTFTTVISGWCSVADMESAMRVYDKMC 444
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 135/327 (41%), Gaps = 48/327 (14%)
Query: 209 QGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKP 268
+G P+ +T++++I A + LDEA + M+ G P L+ + L++
Sbjct: 244 KGCSPNLVTYNVIIGGLCRARL---LDEAIELKRSMVDKGLV---PDLYT--YDILIN-- 293
Query: 269 GGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
G + ++A+ + ++ GL+ + Y+ LI + D E+ +K EM G
Sbjct: 294 GFCMEKRSREAKLMLLEMIDVGLKPEPITYNALI--DGFMRQGDIEQAFRIKDEMVACGI 351
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
E + ++L K G +E A + ++E + + +E + + ++ E
Sbjct: 352 EANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFE 411
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+ EM++R + +V Y II LC+ + T ++++E V G+KP Y L +
Sbjct: 412 LLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHA 471
Query: 449 NLG----------------------MHDRLHLAFS-------------ECLE-KCRPNRT 472
G ++ L + F E LE + RPN
Sbjct: 472 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH 531
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHMHS 499
YG +++ AG +E A+ FN M S
Sbjct: 532 TYGAFIDGYSKAGEMEIADRYFNEMLS 558
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 145/348 (41%), Gaps = 19/348 (5%)
Query: 147 GTYLAV---HCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIF 203
G Y A+ HC E F V+ +++ + + D + L + + K + IF
Sbjct: 566 GIYTALIEGHCKEGNVTEA-FSVFRFILSRRVLQ-DVQTYSVLIHGLSRNGKMHEAFGIF 623
Query: 204 DDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRA 263
++ +G +P+ T++ LI QG +D+A + M + G P +N L
Sbjct: 624 SELQEKGLLPNAFTYNSLISGSCK---QGNVDKASQLLEEMC-IKGINPDIVTYNILIDG 679
Query: 264 LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEM 323
L K G +++A+ +F ++ GL Y+ ++ Y + + L +EM
Sbjct: 680 LC-KAG-----EIERAKNLFDDIEGRGLTPNCVTYAAMV--DGYCKSKNPTAAFQLLEEM 731
Query: 324 QQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEF 383
G + +L C KE E A + +LE T +F +E Y K G+
Sbjct: 732 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKL 790
Query: 384 MKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINL 443
++ + EM E+ + Y +I+ CKA + L E E + P +Y +L
Sbjct: 791 QEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSL 850
Query: 444 TNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKA 490
+ Y N+G + F E + K P++ Y + +++ GN+ +A
Sbjct: 851 LHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEA 898
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 152/363 (41%), Gaps = 29/363 (7%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L KE + + R I + + QG +P ++ LI+ + A ++EA +
Sbjct: 464 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKR---MEEARTYLME 520
Query: 244 MIQLGGYQPRPSLHN-SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
M++ + RP+ H F SK G ++ A+ F+ +L+ G+ IY+ LI
Sbjct: 521 MLE---RRLRPNAHTYGAFIDGYSKAG-----EMEIADRYFNEMLSCGVLPNVGIYTALI 572
Query: 303 WLHSYQDNIDKE----RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
H + N+ + R L ++ +Q + VL+ L ++ G + +A + L
Sbjct: 573 EGHCKEGNVTEAFSVFRFILSRRVLQDV---QTYSVLIHGL---SRNGKMHEAFGIFSEL 626
Query: 359 LESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
E G+ AF Y + K G K+ ++ EM + + + Y+ +I+ LCKA
Sbjct: 627 QEK--GLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAG 684
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYL-NLGMHDRLHLAFSECLEKCRPNRTIYG 475
E E ++L + G+ P +Y + + Y + L L P+ IY
Sbjct: 685 EIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYN 744
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCL 535
+ L EKA ++F M +T S N ++ Y SG +A + + M
Sbjct: 745 VILNFCCKEEKFEKALDLFQEMLEKGF--ASTVSFNTLIEGYCKSGKLQEANHLLEEMIE 802
Query: 536 KKY 538
K++
Sbjct: 803 KQF 805
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 134/314 (42%), Gaps = 17/314 (5%)
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
E++ + + + ++I+ G P +T++ LI ++ QG +++A I + M+ G +
Sbjct: 298 EKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMR---QGDIEQAFRIKDEMVACG-IEA 353
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+ N+L V K G + K A I ++ G+E YS LI H N+
Sbjct: 354 NLIIWNTLLNG-VCKAGKMEK-----ALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNM- 406
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
R L EM++ ++ + G+++ ++ NG+ A VY
Sbjct: 407 -ARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVM--NGLKPNAVVY 463
Query: 373 K--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
M A+AK G +S I M+E+ V Y+ +I CKA+ E + + E +E
Sbjct: 464 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE 523
Query: 431 TGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEK 489
++P +Y + Y G + F+E L PN IY +E GN+ +
Sbjct: 524 RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 583
Query: 490 AEEIFNHMHSDQTI 503
A +F + S + +
Sbjct: 584 AFSVFRFILSRRVL 597
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 154/375 (41%), Gaps = 34/375 (9%)
Query: 165 RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
+ Y +++ H + A A +L D M K+RK A P+ +T+ ++I
Sbjct: 391 QTYSLLIEGHCRGQNMARAFELLDEM-KKRKLA---------------PTVLTYSVIING 434
Query: 225 YLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
G L +I M+ + G +P ++ +L A +K G ++++ I
Sbjct: 435 LCRC---GNLQGTNAILREMV-MNGLKPNAVVYTTLMTAH-AKEG-----RVEESRMILE 484
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
+ G+ Y+ LI +++ R L+ EM + + + +K
Sbjct: 485 RMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLM--EMLERRLRPNAHTYGAFIDGYSK 542
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASV 402
G++E A++ + +L G+ +Y +E + K G ++ +FR + R V
Sbjct: 543 AGEMEIADRYFNEMLSC--GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDV 600
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
Y +I L + + + E E G+ P +Y +L + G D+ E
Sbjct: 601 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 660
Query: 463 -CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
C++ P+ Y I ++ L AG IE+A+ +F+ + + + N + ++ Y S
Sbjct: 661 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEG-RGLTPNCVTYAAMVDGYCKSK 719
Query: 522 DFVKAEKIYDLMCLK 536
+ A ++ + M L+
Sbjct: 720 NPTAAFQLLEEMLLR 734
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 21/247 (8%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ ++ KE KF K D+F +++ +G S ++F+ LI Y + G L EA + MI
Sbjct: 746 ILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKS---GKLQEANHLLEEMI 801
Query: 246 QLGGYQPRPSLHNSLF--RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
+ + P + SL G + +L+ E N++ + Y+ L
Sbjct: 802 E-KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQE---RNVMPTA-----KTYTSL-- 850
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
LH Y + + +S L +EM G E K ++ +EG+V +A K +L
Sbjct: 851 LHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGM 910
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE---RLGSASVPAYHKIIELLCKAEE-TE 419
+ A+ ++A K EF + L++ E+ E RLG + + ++ +E E
Sbjct: 911 PMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAE 970
Query: 420 LTESLMK 426
+ S++K
Sbjct: 971 VLRSMVK 977
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 2/170 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ A+ K+G + + EM E+ S ++ Y+ II LC+A + L + V+ G+
Sbjct: 222 ISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGL 281
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEE 492
P + +Y L N + L E ++ +P Y ++ G+IE+A
Sbjct: 282 VPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFR 341
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIES 542
I + M + I N N +L+ +G KA +I M K E +S
Sbjct: 342 IKDEMVA-CGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDS 390
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 112/297 (37%), Gaps = 50/297 (16%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D L D + K + + +++FDDI +G P+ +T+ ++ Y + A
Sbjct: 669 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNP---TAAF 725
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
+ M+ L G P ++N + + ++A +F +L G
Sbjct: 726 QLLEEML-LRGVPPDAFIYNVILNFCCKEE------KFEKALDLFQEMLEKGF---ASTV 775
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
S + Y + + + L +EM + F S++ K G + +A++ WL +
Sbjct: 776 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 835
Query: 359 LESDNGIPTP------------------------------------AFVYKMEAYAKIGE 382
E N +PT + ++AY + G
Sbjct: 836 QER-NVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGN 894
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
M++ ++ E+ + SV AY +I+ LCK EE L+ E E+G + +P+
Sbjct: 895 VMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPT 951
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 160/381 (41%), Gaps = 36/381 (9%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
TKL + M ++ + + + I D II G PS +T+ L+ A +Q D SI ++
Sbjct: 76 TKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALT---IQKHFDSIHSIISQ 132
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLS---KYYLQQAEF-------IFHNLLTS-GLE 292
++ G +P N++ A S+ G + KY+ + E F+ L+ G+
Sbjct: 133 -VEENGMEPDSIFFNAVINAF-SESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIA 190
Query: 293 IQKDIYSGLIWLHSYQDNIDKE-------------RISLLKK-----EMQQAGFEEGKEV 334
+ + L+ L S +N+ + +++K +M +G +
Sbjct: 191 GEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVT 250
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
++ A+ G+ AE L + S+ + Y K G+ ++L+ M+
Sbjct: 251 YNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMK 310
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
+ ++ ++ +I+ A + + ++ E G+KP + ++ + N + G D
Sbjct: 311 DLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMD 370
Query: 455 RLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
+ F + ++ + +P+ +Y I + AG EKAEEI N M N I
Sbjct: 371 KCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAM-IKSGFHPNVVIFTTI 429
Query: 514 LSAYLSSGDFVKAEKIYDLMC 534
++ + S+G A KI++ MC
Sbjct: 430 INGWCSAGRMEYAIKIFEKMC 450
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 179/432 (41%), Gaps = 58/432 (13%)
Query: 139 KKW-LRQEDGTY---LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKER 194
KKW LR TY L H +R R+++ F VY M + Y+ D L D + K+
Sbjct: 231 KKWDLRLNAYTYRCLLQAH-IRSRDSDRAFNVYMEMWSK-GYQLDIFAYNMLLDALAKDE 288
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
+ + +F D+ + P E T+ I+I G +E+ +++ M+ G P
Sbjct: 289 QLDRSYKVFKDMKLKHCNPDEYTYTIMIRM---TGKMGRAEESLALFEEMLT-KGCTPNL 344
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
+N++ +AL SK G + K A +F N++ + + YS ++ + + + +
Sbjct: 345 IAYNTMIQAL-SKSGMVDK-----AILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGR- 397
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM 374
L + ++ + K + ++R +K G +A + + + +G A++ +
Sbjct: 398 ----LDEVLEVSNKFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISML 453
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE--------------- 419
E+ + G+ ++++E+ ++ E+ S Y+ ++ L K ++
Sbjct: 454 ESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPF 513
Query: 420 --------LTESL-----MKEFVE-------TGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
L SL +KE VE + KP + SY +L N G D H+
Sbjct: 514 PDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMR 573
Query: 460 FSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
F E +K P+ Y +E +E A +F+ M + Q N + NI+L
Sbjct: 574 FLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMIT-QGCCPNIVTYNILLDCLE 632
Query: 519 SSGDFVKAEKIY 530
+G + +Y
Sbjct: 633 RAGRTAETVDLY 644
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 160/381 (41%), Gaps = 36/381 (9%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
TKL + M ++ + + + I D II G PS +T+ L+ A +Q D SI ++
Sbjct: 76 TKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALT---IQKHFDSIHSIISQ 132
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLS---KYYLQQAEF-------IFHNLLTS-GLE 292
++ G +P N++ A S+ G + KY+ + E F+ L+ G+
Sbjct: 133 -VEENGMEPDSIFFNAVINAF-SESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIA 190
Query: 293 IQKDIYSGLIWLHSYQDNIDKE-------------RISLLKK-----EMQQAGFEEGKEV 334
+ + L+ L S +N+ + +++K +M +G +
Sbjct: 191 GEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVT 250
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
++ A+ G+ AE L + S+ + Y K G+ ++L+ M+
Sbjct: 251 YNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMK 310
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
+ ++ ++ +I+ A + + ++ E G+KP + ++ + N + G D
Sbjct: 311 DLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMD 370
Query: 455 RLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
+ F + ++ + +P+ +Y I + AG EKAEEI N M N I
Sbjct: 371 KCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAM-IKSGFHPNVVIFTTI 429
Query: 514 LSAYLSSGDFVKAEKIYDLMC 534
++ + S+G A KI++ MC
Sbjct: 430 INGWCSAGRMEYAIKIFEKMC 450
>gi|414888270|tpg|DAA64284.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 890
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/477 (19%), Positives = 176/477 (36%), Gaps = 85/477 (17%)
Query: 129 GTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLAD 188
G++ R L + L +D + R + + R++++M +Q W R D + +
Sbjct: 110 GSIARCLETARHRLTLQDFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAIVIG 169
Query: 189 YMGKERK--FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQ 246
+G++ KC ++F D+ + R + +++ LI AY + +EA ++ ++M +
Sbjct: 170 VLGRQGPALLDKCLEVFHDLPAESR--TALSYTSLIAAYARNALH---EEARALLDQM-K 223
Query: 247 LGGYQPRPSLHNSLFRALV----------------------SKPG---GLSKY------- 274
G P + +N++ A + P L+ Y
Sbjct: 224 ATGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAA 283
Query: 275 ----YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE 330
Q+E + H +L +G+ Y ++ + N+ R + L EM G
Sbjct: 284 AVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDAFASAGNL--SRAAELFSEMAATGHTA 341
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEI 389
L ++ + G DA LR +++D PT A + ++ Y + G F ++
Sbjct: 342 DASAYLGLMEAHTRVGATADAVAV-LRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQL 400
Query: 390 FREMQERLGSASVPAYHKIIELLCKA----EETELTESLMKEFVET-------------- 431
FREM+ + Y+ + + E EL ++K V+
Sbjct: 401 FREMRTAV-PPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGH 459
Query: 432 -----------------GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTI 473
GM P +Y L + M++ ++AF+ E P
Sbjct: 460 GGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLET 519
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
Y + G ++AE IF+ M ++ I + S + ++ AY A K Y
Sbjct: 520 YNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAY 576
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 17/232 (7%)
Query: 199 CRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN 258
R++ + + +G VP+ + L+ A A + +EA +N M ++G P +N
Sbjct: 466 AREVLEYMTREGMVPTADAYTGLVEALGHAAM---YEEAYVAFNMMTEIGSL-PTLETYN 521
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLT-SGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
+L A GGL Q+AE IF + +G++ KD + LI + +D +
Sbjct: 522 AL--AFAYARGGL----FQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKA 575
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
+ EM+++ F + L VL G ++++++ + L S A+ + Y
Sbjct: 576 YM--EMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLY 633
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
A+ + + ++ EM+ S++ H++I L K E + + M E+V
Sbjct: 634 ARNDRWTDAYDLLEEMKTNRASST----HQVIASLIKGEYDDSSNWQMVEYV 681
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 125/323 (38%), Gaps = 17/323 (5%)
Query: 178 FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEA 237
D T + D++ K +K + + I G P+ T++ L+ G L+EA
Sbjct: 163 IDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCK---MGRLEEA 219
Query: 238 CSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI 297
+ +++ G P + SL L + Y L F + GL +
Sbjct: 220 IDLLRKIVD-NGCTPDVVTYTSLIDGLGKEKRSFEAYKL------FKEMALRGLVLDTVC 272
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
Y+ LI I + S + K M G L +++ K G + A + + +
Sbjct: 273 YTALIRGLLQAGKIPQA--SSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIF-K 329
Query: 358 LLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
+E+ G+ VY + K + +LE+ +M++ + Y+ +I+ LCK+
Sbjct: 330 SMEA-RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKS 388
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIY 474
+ E + E +E G KP + +Y L + + G D F + C PN Y
Sbjct: 389 GDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTY 448
Query: 475 GIYLESLKNAGNIEKAEEIFNHM 497
G + L + KA F HM
Sbjct: 449 GTLISGLCKRRQLTKASLYFQHM 471
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 112/283 (39%), Gaps = 25/283 (8%)
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
I G P + +N+L L K G L++A + ++ +G Y+ LI
Sbjct: 191 ITANGCTPTIATYNALLNGLC-KMG-----RLEEAIDLLRKIVDNGCTPDVVTYTSLI-- 242
Query: 305 HSYQDNIDKERISL----LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
D + KE+ S L KEM G +++R + G + A + + +
Sbjct: 243 ----DGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVY-KTMT 297
Query: 361 SDNGIPTPAFVYKM-EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
S +P + M + K G ++ IF+ M+ R + + Y +I LCKA + +
Sbjct: 298 SQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 357
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYL 478
++ + + P +Y L + G + F E LE C+P+ Y I +
Sbjct: 358 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILV 417
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
AGN + A +F+ M S S N++ L SG
Sbjct: 418 SGFCKAGNTDAACGVFDDMSSSHC------SPNVVTYGTLISG 454
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 152/337 (45%), Gaps = 17/337 (5%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
+M+++ ++ T L ++ + K + +FD+++ +G P + +I
Sbjct: 248 LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKF- 306
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNS-LFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
G + A +++ M + R + N+ + AL++ G ++ AE + +++ +
Sbjct: 307 --GNMKRAFVLFDEMTE------RRLVPNAYTYGALIN--GACKAGEMKAAEMMVNDMQS 356
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
G+++ + I++ L+ + + ID+ L+ MQQ GFE + +
Sbjct: 357 KGVDVNRVIFNTLMDGYCKKGMIDEAL--RLQNIMQQKGFEIDAFTCNIIASGFCRSNRR 414
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
E+A++ L + E +F ++ Y K F ++ +F+ M+++ + SV Y+
Sbjct: 415 EEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAF 474
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR 468
IE CK + E L+ E E G+ P +Y +L + G DR F+E + +
Sbjct: 475 IERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNE-MPQLG 533
Query: 469 PNRTI--YGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
NR + Y + + L G ++A ++++ M+ + +
Sbjct: 534 LNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIV 570
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
A + G +E R+M + V ++ +++ LCK E ++LM E V G KP
Sbjct: 162 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 221
Query: 436 LMPSYINLTNMYLNL----GMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAE 491
+ +Y L N Y+ + G+++ L L ++ N T Y + +E + IE+AE
Sbjct: 222 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDY---NVTTYTMLIEWYSRSSKIEEAE 278
Query: 492 EIFNHM 497
++F+ M
Sbjct: 279 KLFDEM 284
>gi|414885834|tpg|DAA61848.1| TPA: leaf protein [Zea mays]
Length = 637
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 153/360 (42%), Gaps = 30/360 (8%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + +R F + ++ G P + F+ LI A++ A G EA + + +
Sbjct: 106 TILLTALTNQRMFESIPSLLAEVELAGVRPDSIFFNALINAFVEAKRMG---EAINTFWK 162
Query: 244 MIQLGGYQPRPSLHNSLFRA--LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
M + G P S N+L + +V KP ++++ +F + G ++ ++ +
Sbjct: 163 M-KHSGCHPTTSTFNTLIKGYGIVGKP--------EESQRVFDMMGVEG-SVRPNLTTYN 212
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE------KTW 355
I + ++ D+ + E + +MQ GFE ++ A + AE +T
Sbjct: 213 ILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETWRAEELIVEIQTR 272
Query: 356 LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
+R E GI + Y + G ++L ++M++ +V ++ +++ A
Sbjct: 273 VRTSERTWGI-------IIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDA 325
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIY 474
+ ++ + G+KP + +Y + N + +LG + F + +E P+ +Y
Sbjct: 326 NDMAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVY 385
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
I + A EKAE++ M S + N + ++S + S D A ++YD MC
Sbjct: 386 SILAKGFVRAQQPEKAEDLLLQM-SHLGLCPNVVTFTTVISGWCSVADMESAMRVYDKMC 444
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 121/282 (42%), Gaps = 21/282 (7%)
Query: 257 HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERI 316
HN L +AL+S G K Q + + D+ + +H Y + E
Sbjct: 258 HNILLKALLS--AGRLKDACQHFD---------EMSSPPDVVTYGTMVHGYCVRGELENA 306
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE--SDNGIPTPAFVYK- 373
L EM G E V SV+ + +G V DA LR+LE + +G+ A V+
Sbjct: 307 VKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDA----LRVLEDMTMHGVALDAVVFTT 362
Query: 374 -MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
+ + G+ + +F EMQ+R +A + +I LC+A E + + +++E V+ G
Sbjct: 363 VISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKG 422
Query: 433 MKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAE 491
+ + +Y L + Y G M + + + PN Y + L G++ A
Sbjct: 423 LDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAAN 482
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
E+ + M ++ + +N + N +++ G+ +A +I M
Sbjct: 483 ELLHEM-CNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEM 523
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 173/418 (41%), Gaps = 45/418 (10%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYM---GKERKFAKCRDIFDDIINQG------RVPSEM 216
Y M+ + R + A KL D M G E + + N+G RV +M
Sbjct: 289 TYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDM 348
Query: 217 TFH------ILIVAYLSA-PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG 269
T H ++ +S +G L A ++ M + G R + H +L L + G
Sbjct: 349 TMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVT-HTALINGLC-RAG 406
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN-IDKERISLLKKEMQQAGF 328
L++A+ + ++ GL++ Y+ LI + + N ++ R+ EM
Sbjct: 407 -----ELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRV---HNEMV---- 454
Query: 329 EEGKEVLLSVLRVCA------KEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKI 380
G+ V +V+ A K+GDV A + + + G+ + Y + K
Sbjct: 455 --GRRVAPNVVTYTALSDGLCKQGDVRAANELLHEM--CNKGLELNVYTYNSLINGLCKF 510
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G +++ I EM+ V Y +I+ LCK+ E + ++++E ++ G+KP + +Y
Sbjct: 511 GNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATY 570
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
L N + G + LEK RPN Y ++ N++ EI+ MHS
Sbjct: 571 NVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHS 630
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRK 557
Q + N + NI++ + + + +A + M K + ++ L +L+ +K
Sbjct: 631 -QEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKK 687
>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/434 (20%), Positives = 173/434 (39%), Gaps = 46/434 (10%)
Query: 131 LVRILNAQKKW-LRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLA 187
L + + KKW LR TY L +R R E GF VY M++ + D L
Sbjct: 195 LQKCIGLIKKWGLRMTGYTYKCLVQAYLRSRNTEKGFAVY-LEMKKKGHMLDIFAFNMLL 253
Query: 188 DYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL 247
D + K+ + +F+D+ + P E T+ I+I ++ + G DE+ ++ M+
Sbjct: 254 DALVKDSEVDHAYKVFEDMKRKHCEPDEYTYTIMI--RMTGKI-GKPDESLELFEEMLN- 309
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
GY P +N++ +AL + + +A +F ++ + YS ++ L +
Sbjct: 310 KGYSPNVIAYNTMIQALA------NARMVDKAILLFLKMVEKECRPSEFTYSVILHLLAT 363
Query: 308 QDNIDK--ERISLLKKEMQQAGF---------------------------EEG-KEVLLS 337
+ + K E + + KK M ++ + E G ++ +S
Sbjct: 364 ERKLHKLDEVVEVSKKYMSRSIYAYLVRTLKKLGHASEAHRLFCNMWNCHERGDRDACVS 423
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
+L G +A ++ E + T + A K+ + +++ +M++
Sbjct: 424 MLECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQDG 483
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
Y+ +I +A + + + +E ++ KP SY +L N G D H
Sbjct: 484 PLPDTFTYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAH 543
Query: 458 LAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
+ F E EK P+ Y +E +E A +F+ M ++ N + NI+L
Sbjct: 544 MKFKEMCEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYP-NIVTYNILLDC 602
Query: 517 YLSSGDFVKAEKIY 530
SG +A +Y
Sbjct: 603 LERSGRTAEAVDLY 616
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/432 (21%), Positives = 176/432 (40%), Gaps = 35/432 (8%)
Query: 97 PVVEVIELEELPEQWRRAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTY---LAVH 153
P+ ++E ++L R K H G L L+ + + LR E + + ++
Sbjct: 80 PLPCIVEFDKLLSALVRIK----------HYGTVLS--LSKRIELLRIERDVFHFNILIN 127
Query: 154 CM-RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRV 212
C R++ + F V +++ + D + L + + E KFA+ + FD+++ G
Sbjct: 128 CFSRLQRVDFAFSVLGKIIKL-GFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQ 186
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ T++ +I + G A + +M + GG +P ++N++ L
Sbjct: 187 PNLHTYNTIIKGFCKI---GKTTVAVGLLKKMDKAGG-RPDIVIYNTIIDGLCKDR---- 238
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ +A IF + G ++ D+++ I +H ++ KE S L EM
Sbjct: 239 --LVSEALDIFSEIKGKG--VRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDV 294
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIF 390
++ KEG + +A+ ++E G+ Y M Y + ++ +F
Sbjct: 295 VTFNILVDKLCKEGMLSEAQGIIKIMIE--KGVEPNYATYNSLMNGYCLQNKVFEARMVF 352
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
M + +V +Y+ +I CKA+ + L E G+ P +Y L +
Sbjct: 353 DAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQA 412
Query: 451 GMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
G H F + + C P+ I L+SL G ++ A +F M D + N +
Sbjct: 413 GRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQ-DSCLKPNLVT 471
Query: 510 CNIILSAYLSSG 521
+I++ A SG
Sbjct: 472 YDILIRAMYKSG 483
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 101/241 (41%), Gaps = 23/241 (9%)
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+F +++E F EM ++ Y+ II+ CK +T + L+K+ + G +P + Y
Sbjct: 169 KFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIY- 227
Query: 442 NLTNMYLNLGMHDRLHL----AFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
N ++ DRL FSE K RP+ Y I + L N+ E+A +FN
Sbjct: 228 ---NTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNE 284
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL--DYVLSL 554
M S I + + NI++ G +A+ I +M K E A L Y L
Sbjct: 285 MMS-LNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQN 343
Query: 555 NRKEVKKPVSLNLSSEQRENLI--GLLLGGLCIES--DEKRK-------RHMIRFQFNEN 603
E + ++ N++ +L+ G C DE R+ R +I FN N
Sbjct: 344 KVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYN 403
Query: 604 S 604
+
Sbjct: 404 T 404
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 72/164 (43%), Gaps = 2/164 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
++ + KIG+ ++ + ++M + G + Y+ II+ LCK + E G+
Sbjct: 196 IKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGV 255
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEE 492
+P + +Y L + N + F+E + P+ + I ++ L G + +A+
Sbjct: 256 RPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQG 315
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
I M ++ + N + N +++ Y +A ++D M K
Sbjct: 316 IIKIM-IEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITK 358
>gi|414888268|tpg|DAA64282.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 868
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/477 (19%), Positives = 176/477 (36%), Gaps = 85/477 (17%)
Query: 129 GTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLAD 188
G++ R L + L +D + R + + R++++M +Q W R D + +
Sbjct: 88 GSIARCLETARHRLTLQDFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAIVIG 147
Query: 189 YMGKERK--FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQ 246
+G++ KC ++F D+ + R + +++ LI AY + +EA ++ ++M +
Sbjct: 148 VLGRQGPALLDKCLEVFHDLPAESR--TALSYTSLIAAYARNALH---EEARALLDQM-K 201
Query: 247 LGGYQPRPSLHNSLFRALV----------------------SKPG---GLSKY------- 274
G P + +N++ A + P L+ Y
Sbjct: 202 ATGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAA 261
Query: 275 ----YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE 330
Q+E + H +L +G+ Y ++ + N+ R + L EM G
Sbjct: 262 AVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDAFASAGNL--SRAAELFSEMAATGHTA 319
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEI 389
L ++ + G DA LR +++D PT A + ++ Y + G F ++
Sbjct: 320 DASAYLGLMEAHTRVGATADAVAV-LRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQL 378
Query: 390 FREMQERLGSASVPAYHKIIELLCKA----EETELTESLMKEFVET-------------- 431
FREM+ + Y+ + + E EL ++K V+
Sbjct: 379 FREMRTAV-PPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGH 437
Query: 432 -----------------GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTI 473
GM P +Y L + M++ ++AF+ E P
Sbjct: 438 GGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLET 497
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
Y + G ++AE IF+ M ++ I + S + ++ AY A K Y
Sbjct: 498 YNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAY 554
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 17/232 (7%)
Query: 199 CRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN 258
R++ + + +G VP+ + L+ A A + +EA +N M ++G P +N
Sbjct: 444 AREVLEYMTREGMVPTADAYTGLVEALGHAAM---YEEAYVAFNMMTEIGSL-PTLETYN 499
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLT-SGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
+L A GGL Q+AE IF + +G++ KD + LI + +D +
Sbjct: 500 AL--AFAYARGGL----FQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKA 553
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
+ EM+++ F + L VL G ++++++ + L S A+ + Y
Sbjct: 554 YM--EMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLY 611
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
A+ + + ++ EM+ S++ H++I L K E + + M E+V
Sbjct: 612 ARNDRWTDAYDLLEEMKTNRASST----HQVIASLIKGEYDDSSNWQMVEYV 659
>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Cucumis sativus]
Length = 697
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 98/212 (46%), Gaps = 6/212 (2%)
Query: 325 QAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGE 382
Q+G + G L+++ K G +E + RL+ ++G+ + + Y M + K
Sbjct: 432 QSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLI--NDGLISNIYSYNMVIDCLCKGKS 489
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
++ E+FR++ R S ++ Y+ +I C+ + + L++ +E+ +P + ++ +
Sbjct: 490 MDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNS 549
Query: 443 LTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQ 501
L + H+ F+E +E PN Y I + S G++ ++ + M
Sbjct: 550 LIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKL-H 608
Query: 502 TIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
I +T S N ++ Y F KAEK++D M
Sbjct: 609 GIQPDTFSFNALIQGYTGKNRFQKAEKLFDSM 640
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 119/293 (40%), Gaps = 13/293 (4%)
Query: 209 QGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKP 268
+G VPS TF+I + L + L C++++ +Q G +P S + +L AL K
Sbjct: 398 EGYVPSSSTFNITLACVLK---KLDLKVTCTVFDNCVQ-SGVKPGFSTYLTLIEALY-KA 452
Query: 269 GGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
G + + L+ GL +IYS + + +R S + +++ G
Sbjct: 453 GKM-----EIGNRYMDRLINDGL--ISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGI 505
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
+++ + G+++ A++ LLES F ++ + + +
Sbjct: 506 SPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFG 565
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
F EM E +V Y+ +I C + + L+++ G++P S+ L Y
Sbjct: 566 CFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYT 625
Query: 449 NLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
+ F L +P+ YG ++SL +G +KA EIF M +
Sbjct: 626 GKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKEN 678
>gi|255582522|ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528289|gb|EEF30336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 478
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 154/384 (40%), Gaps = 28/384 (7%)
Query: 131 LVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFR--------VYEWMMQQHWYRFDFAL 182
LVR L+ + +R E HC + E E G R V+ WM +Q WY D +
Sbjct: 83 LVRTLDKYVRVVRTE-------HCFLLFE-ELGRRDKWLQCLEVFRWMQKQRWYIADSGV 134
Query: 183 ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQG-CLDEACSIY 241
+KL MGK+ + +F ++ N G P ++ LI A+L + + L +A +
Sbjct: 135 YSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDSSVYNALITAHLHSKDKAKALIKALGYF 194
Query: 242 NRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
+M + QP +N L RA + Q +F +L S + DIY+
Sbjct: 195 EKMKGMQRCQPNVVTYNILLRAFAQARN------VNQVNALFKDLDQS--IVSPDIYTYN 246
Query: 302 IWLHSYQDN-IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
+ +Y N + +E S+L + M+ + ++ K+ D + E+ + LL
Sbjct: 247 GVMDAYGKNGMIREMESVLSR-MKSNQCKPDIITFNLLIDSYGKKQDFDKMEQVFKSLLH 305
Query: 361 SDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
S P F + Y K + + + ++M + + + Y +I + +
Sbjct: 306 SKERPTLPTFNSMITNYGKARQKENAESVLQKMTKMKYTPNFITYESLIMMYGFCDSVSK 365
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLE 479
+ + +E+G + + + + ++Y G+ L F P+ T Y + +
Sbjct: 366 AREIFDDMIESGKEVKVSTLNAMLDVYCLNGLPMEADLLFDNARNVGLLPDSTTYKLLYK 425
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTI 503
+ A + +++ HM D I
Sbjct: 426 AYTKANMKKLVQKLLKHMDRDGII 449
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 142/339 (41%), Gaps = 46/339 (13%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
K D+ +++ +G P+ + LI Y +G + AC I+++M ++ P +
Sbjct: 450 KASDLLEEMTTKGLKPNAFVYAPLISGYCR---EGNVSLACEIFDKMTKVN-VLPDLYCY 505
Query: 258 NSLFRALVSKPGGL---SKYY---------------------------LQQAEFIFHNLL 287
NSL L SK G + +KY+ L+ AE + +L
Sbjct: 506 NSLIFGL-SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 564
Query: 288 TSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGD 347
+GL+ IY L L SY + D E++S K M G + ++ + G+
Sbjct: 565 DTGLKPNDVIYIDL--LESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN 622
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
+E A + L +E + +P VY + K + K+ I EM ++ ++ Y
Sbjct: 623 MEAAFRV-LSGIEKNGSVPD-VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCY 680
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE 465
+ +I+ LCK+ + ++ + G+ P +Y +L + +G ++E L
Sbjct: 681 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 740
Query: 466 K-CRPNRTIYGIYLESLKNAGNIEKA----EEIFNHMHS 499
P+ +Y + +AG++E+A EE+F H+
Sbjct: 741 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA 779
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 69/349 (19%), Positives = 145/349 (41%), Gaps = 26/349 (7%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K R+F + + ++ +G + +T+++LI + G ++EA + + ++ G
Sbjct: 234 KVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRS---GAVEEAFG-FKKDMEDYGLV 289
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P + +L L +A+ + + + L+ +Y+ LI + N
Sbjct: 290 PDGFTYGALINGLCKS------RRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 343
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
D E ++K EM AG + K +++R K G ++ A +++ + T +
Sbjct: 344 D-EAFKMIK-EMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 401
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
+E + + + + EM+ S +V Y +I LC++ E E L++E
Sbjct: 402 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 461
Query: 432 GMK-------PLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNA 484
G+K PL+ Y N+ L + D++ P+ Y + L
Sbjct: 462 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV------NVLPDLYCYNSLIFGLSKV 515
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G +E++ + F M ++ + N + + ++ YL +GD AE++ M
Sbjct: 516 GRVEESTKYFAQMQ-ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 563
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+EAY K+ EF + ++ EM+ER + Y+ +I LC++ E K+ + G+
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSE--CLEKCRPNRTIYGIYLESLKNAGNIEKAE 491
P +Y L N + E C E +PN +Y ++ GN ++A
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAE-LKPNVVVYANLIDGFMREGNADEAF 347
Query: 492 EIFNHM 497
++ M
Sbjct: 348 KMIKEM 353
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 123/326 (37%), Gaps = 67/326 (20%)
Query: 203 FDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFR 262
F + +G +P+E T+ LI YL G L+ A + RM+ G +P ++ L
Sbjct: 525 FAQMQERGLLPNEFTYSGLIHGYLK---NGDLESAEQLVQRMLDTG-LKPNDVIYIDLLE 580
Query: 263 AL-----VSKPGGLSKYYLQQA--------EFIFHNLLTSG-LEIQKDIYSGL------I 302
+ + K K L Q + HNL +SG +E + SG+
Sbjct: 581 SYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVP 640
Query: 303 WLHSYQDNI-------DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK-- 353
+H Y I D+E+ + EM + G + +++ K GD+ A
Sbjct: 641 DVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 700
Query: 354 -------------TWLRLLESD------------------NGIPTPAFVYKM--EAYAKI 380
T+ L++ GI AFVY + +
Sbjct: 701 NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 760
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G+ +++ + EM R G AS+ +++ +++ CK + + T L+ + G+ P +
Sbjct: 761 GDLEQAMFLIEEMFLR-GHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTI 819
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEK 466
N+ + G +H F E +K
Sbjct: 820 ENIISGLSEAGKLSEVHTIFVELQQK 845
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 142/339 (41%), Gaps = 46/339 (13%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
K D+ +++ +G P+ + LI Y +G + AC I+++M ++ P +
Sbjct: 345 KASDLLEEMTTKGLKPNAFVYAPLISGYCR---EGNVSLACEIFDKMTKVN-VLPDLYCY 400
Query: 258 NSLFRALVSKPGGL---SKYY---------------------------LQQAEFIFHNLL 287
NSL L SK G + +KY+ L+ AE + +L
Sbjct: 401 NSLIFGL-SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 459
Query: 288 TSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGD 347
+GL+ IY L L SY + D E++S K M G + ++ + G+
Sbjct: 460 DTGLKPNDVIYIDL--LESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN 517
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
+E A + L +E + +P VY + K + K+ I EM ++ ++ Y
Sbjct: 518 MEAAFRV-LSEIEKNGSVPD-VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCY 575
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE 465
+ +I+ LCK+ + ++ + G+ P +Y +L + +G ++E L
Sbjct: 576 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 635
Query: 466 K-CRPNRTIYGIYLESLKNAGNIEKA----EEIFNHMHS 499
P+ +Y + +AG++E+A EE+F H+
Sbjct: 636 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA 674
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 166/409 (40%), Gaps = 39/409 (9%)
Query: 132 VRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMG 191
+R NA K L + D L ++V E+M+ + +T + Y
Sbjct: 82 IRCCNALLKDLLRADAMALL------------WKVREFMVGAGISPDVYTYSTLIEAYC- 128
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K R+F + + ++ +G + +T+++LI + G ++EA + + ++ G
Sbjct: 129 KVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRS---GAVEEAFG-FKKDMEDYGLV 184
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P + +L L +A+ + + + L+ +Y+ LI + N
Sbjct: 185 PDGFTYGALINGLCKSRRS------NEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 238
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
D E ++K EM AG + K +++R K G ++ A +++ + T +
Sbjct: 239 D-EAFKMIK-EMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 296
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
+E + + + + EM+ S +V Y +I LC++ E E L++E
Sbjct: 297 LIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 356
Query: 432 GMK-------PLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNA 484
G+K PL+ Y N+ L + D++ P+ Y + L
Sbjct: 357 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV------NVLPDLYCYNSLIFGLSKV 410
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G +E++ + F M ++ + N + + ++ YL +GD AE++ M
Sbjct: 411 GRVEESTKYFAQMQ-ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 458
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 123/328 (37%), Gaps = 71/328 (21%)
Query: 203 FDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFR 262
F + +G +P+E T+ LI YL G L+ A + RM+ G +P ++ L
Sbjct: 420 FAQMQERGLLPNEFTYSGLIHGYLK---NGDLESAEQLVQRMLDTG-LKPNDVIYIDLLE 475
Query: 263 AL-----VSKPGGLSKYYLQQA--------EFIFHNLLTSG---------LEIQKD---- 296
+ + K K L Q + HNL +SG EI+K+
Sbjct: 476 SYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVP 535
Query: 297 ---IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
+YS LI D+E+ + EM + G + +++ K GD+ A
Sbjct: 536 DVHVYSSLI--SGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARN 593
Query: 354 ---------------TWLRLLESD------------------NGIPTPAFVYKM--EAYA 378
T+ L++ GI AFVY + +
Sbjct: 594 VFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCS 653
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
G+ +++ + EM R G AS+ +++ +++ CK + + T L+ + G+ P
Sbjct: 654 SAGDLEQAMFLIEEMFLR-GHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 712
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLEK 466
+ N+ + G +H F E +K
Sbjct: 713 TIENIISGLSEAGKLSEVHTIFVELQQK 740
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 179/432 (41%), Gaps = 58/432 (13%)
Query: 139 KKW-LRQEDGTY---LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKER 194
KKW LR TY L H +R R+++ F VY M + Y+ D L D + K+
Sbjct: 226 KKWDLRLNAYTYRCLLQAH-IRSRDSDRAFNVY-MEMWSNGYQLDIFAYNMLLDALAKDE 283
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
+ + +F D+ + P E T+ I+I G +E+ +++ M+ G P
Sbjct: 284 QLDRSYKVFKDMKLKHCNPDEYTYTIMIRM---TGKMGRAEESLALFEEMLT-KGCTPNL 339
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
+N++ +AL SK G + K A +F N++ + + YS ++ + + + +
Sbjct: 340 IAYNTMIQAL-SKSGMVDK-----AILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGR- 392
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM 374
L + ++ + K + ++R +K G +A + + + +G A++ +
Sbjct: 393 ----LDEVLEVSNKFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISML 448
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE--------------- 419
E+ + G+ ++++E+ ++ E+ S Y+ ++ L K ++
Sbjct: 449 ESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPF 508
Query: 420 --------LTESL-----MKEFVE-------TGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
L SL +KE VE + KP + SY +L N G D H+
Sbjct: 509 PDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMR 568
Query: 460 FSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
F E +K P+ Y +E +E A +F+ M + Q N + NI+L
Sbjct: 569 FLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMIT-QGCCPNIVTYNILLDCLE 627
Query: 519 SSGDFVKAEKIY 530
+G + +Y
Sbjct: 628 RAGRTAETVDLY 639
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 100/232 (43%), Gaps = 2/232 (0%)
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
D+ + I +H Y + E L EM G E SV+ + EG V DA +
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343
Query: 356 LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
++ + F M + + G+ + F EMQ+R +A Y +I LC+A
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIY 474
E + E +++E + G+ +Y L + Y +G L ++ ++K PN Y
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
+ L G++ A E+ + M S + + +N + N +++ +G+ +A
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCS-KGLELNIFTYNSLINGLCKAGNLEQA 514
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 117/285 (41%), Gaps = 8/285 (2%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
L++AE + + GL++ Y+ LI Y L+ +M Q
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLI--DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM 393
++ K+GDV A + + G+ F Y + K G +++ +M
Sbjct: 464 TALSDGLCKQGDVCAANELLHEM--CSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
E V Y II LC+++E + SL++E ++ G+KP + +Y L N + G
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581
Query: 454 DRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI 512
+ LEK PN T Y ++ N++ EI+ M S + + N + NI
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVP-NENTYNI 640
Query: 513 ILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRK 557
++ + + + +A + M K + + ++ L +L+ +K
Sbjct: 641 LIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
CM R E G R+ EWM++++ + + + Y E+ +I+ +++Q VP
Sbjct: 576 CMSGRV-EGGKRLLEWMLEKNIHPNTTTYNSLMKQYC-IEKNMKSTTEIYKGMLSQEVVP 633
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK 273
+E T++ILI + A + EA ++ MI+ G++ S +N+L R L K
Sbjct: 634 NENTYNILIKGHCKA---RNMKEALYFHSEMIE-KGFRLTASSYNALIRLLNKKKK---- 685
Query: 274 YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+A +F + L + D+Y+ I L +DN++
Sbjct: 686 --FTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLE 722
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 142/353 (40%), Gaps = 53/353 (15%)
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
GK+ +F ++ N G P TF+ LI AY G ++A ++ MI+ G+
Sbjct: 479 GKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRC---GSNNDAAKMHEEMIK-AGF 534
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
P + +N+L AL + + AE + ++ G + YS + +HSY
Sbjct: 535 SPCINTYNALLNALARRGD------WKAAESVILDMRNKGFRPSETSYS--LMVHSYAKG 586
Query: 311 IDKERISLLKKE-----------------------------------MQQAGFEEGKEVL 335
+ + I +++K +Q+ G++ +
Sbjct: 587 GNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLC 646
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM 393
S+L + AK ++ D LRL+ D G+ + M+ YA+ G+ K+ E+ R +
Sbjct: 647 NSMLSIFAKN-NMYDRAHEMLRLIH-DAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRML 704
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
Q G + +Y+ +I+ C+ + ++ E G+ P + +Y + Y GM
Sbjct: 705 QTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMF 764
Query: 454 DRLHLAFS-ECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS-DQTIG 504
++ S + CRPN Y I + A ++A + + + D T G
Sbjct: 765 TEINDVISYMIVHNCRPNELTYKIVADGYCKARRYDEAIDFVSKIKDVDDTFG 817
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVY 372
++I L EM+ G + + +VL C +EG +++A + + L+S+ P T +
Sbjct: 275 DKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEA-REFFSGLKSEGYKPGTVTYNA 333
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
+ + K G F ++L + EM+E Y++++ +A E ++ G
Sbjct: 334 LLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKG 393
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAE 491
+ P +Y + N Y +G D+ F + +E C PN Y L L E+
Sbjct: 394 IMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMM 453
Query: 492 EIFNHM 497
+I HM
Sbjct: 454 KILGHM 459
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 149/363 (41%), Gaps = 29/363 (7%)
Query: 176 YRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLD 235
Y D T + + K+ + +IF+ + G PS +T+++++ Y G +
Sbjct: 218 YVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVY------GKMG 271
Query: 236 EACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQK 295
+ ++++++L L F + + +A F L + G +
Sbjct: 272 RS---WDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGT 328
Query: 296 DIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKT 354
Y+ L LH + + I E +S+L EM++ V+ + G E+
Sbjct: 329 VTYNAL--LHVFGKAGIFSEALSVLS-EMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVV 385
Query: 355 WLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+ + GI A Y + AY ++G+ K+LE+F +M E +V Y+ ++ +L
Sbjct: 386 IDAM--ASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGML 443
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL---NLGMHDRLHLAFSECLEKC-- 467
K L+E +MK + P++I M GMH ++ F E ++ C
Sbjct: 444 GK---KSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFRE-MKNCGF 499
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHM-HSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
P+R + + + G+ A ++ M + + +NT N +L+A GD+ A
Sbjct: 500 EPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTY--NALLNALARRGDWKAA 557
Query: 527 EKI 529
E +
Sbjct: 558 ESV 560
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 38/233 (16%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
++R+ +E A K + + D + A+ + AY++ G++ +++EIF M E
Sbjct: 193 MVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESG 252
Query: 398 GSASVPAYH--------------KIIELLCKAEETELT---------------ESLMKEF 428
S S+ Y+ KI+ELL + L E L+ E
Sbjct: 253 LSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEA 312
Query: 429 VE-------TGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLES 480
E G KP +Y L +++ G+ SE E C P+ Y + +
Sbjct: 313 REFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAA 372
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
AG E+ + + M S + I N + I++AY GD KA +++D M
Sbjct: 373 YVRAGFHEEGAVVIDAMAS-KGIMPNAVTYTTIINAYGRVGDIDKALEMFDQM 424
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 137/305 (44%), Gaps = 16/305 (5%)
Query: 233 CLDEACSIYNRMIQLGGYQPRPSL--HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
CLD+A S+++RM+++ +P PS+ + LF+ +++ K+Y +F + G
Sbjct: 42 CLDDAVSLFHRMVRM---KPLPSVIDFSKLFKTMINM-----KHY-SAVVSLFREMRILG 92
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ I I + + + + ID S+L + + G ++L E V D
Sbjct: 93 IPISDSILNIVTNSYCLRHRIDCA-FSVLPIYL-KTGIPFNVVTFNTLLGGLFAENKVTD 150
Query: 351 AEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
A + +L+ P + M +K G K+L + R M++ V Y +I
Sbjct: 151 AVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVI 210
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCR 468
+ LCK + +L+ E + + P + +Y +L + LG +++ SE +
Sbjct: 211 DALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNIN 270
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
PN + I ++ L G +E A+E+ HM ++ + + + + I+ Y G +A +
Sbjct: 271 PNVHTFSILIDGLCKEGKVEDADEVMRHM-IEKGVEPDIITYSAIMDGYCLRGQVDRARR 329
Query: 529 IYDLM 533
+++++
Sbjct: 330 VFNVL 334
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 88/215 (40%), Gaps = 9/215 (4%)
Query: 294 QKDIYSGLIWLHSYQDNIDK----ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
QK+I + +S D + K E++ L EM ++ KEG VE
Sbjct: 231 QKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVE 290
Query: 350 DAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
DA++ ++E G+ Y M+ Y G+ ++ +F ++++ ++ +Y
Sbjct: 291 DADEVMRHMIEK--GVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSI 348
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-K 466
+I CK + L E + G+KP +Y + + + +G F E L
Sbjct: 349 LINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVG 408
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQ 501
P+ ++ L G +E+A +F+ + ++
Sbjct: 409 PTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNR 443
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 105/265 (39%), Gaps = 47/265 (17%)
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQ 294
D+A I+ RM ++ G QP +NSL AL+ +K+ +AE F T GL
Sbjct: 95 DQALDIFQRMHEIFGCQPGIRSYNSLLNALIES----NKW--DEAESFFLYFETMGLSPN 148
Query: 295 KDIYSGLIWLHSYQDNIDKER---------------------ISLLKK------------ 321
Y+ LI + + DK + I+ L K
Sbjct: 149 LQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFD 208
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT-PAFVYKMEAYAKI 380
EM + G ++ K+GD+ +A + W RLL+ + P P++ + K
Sbjct: 209 EMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKC 268
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G+F +S EI+ M++ + Y +I LC + + + KE E G+ P + Y
Sbjct: 269 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 328
Query: 441 INLTNMYLNLGMHDRLHLAFSECLE 465
+ N YL G ECLE
Sbjct: 329 NTMLNGYLRAG-------RIEECLE 346
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ + + + +L F M + +V Y+ +I L KAE +L+KE + G
Sbjct: 471 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW 530
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFS---ECLEKC-RPNRTIYGIYLESLKNAGNIEK 489
KP M +Y L N L +L +A + + LEK +P+ ++ I + L ++G +E
Sbjct: 531 KPNMITYSLLMN---GLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 587
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
A ++++ M + + N + N ++ + DF +A KI+D
Sbjct: 588 ALQLYSEMKQRKCVP-NLVTHNTLMEGFYKVRDFERASKIWD 628
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 126/294 (42%), Gaps = 27/294 (9%)
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
R+I+L + P S+F ++ PG ++FH++L K ++ +
Sbjct: 12 RVIKLLKSEKNPHSALSIFDSVTRFPG------YSHTPYVFHHIL-------KRLFDPKL 58
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
H +S + + ++ + ++V L+V++ AK + A + R+ E
Sbjct: 59 VAH----------VSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIF 108
Query: 363 NGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
P ++ + A + ++ ++ F + S ++ Y+ +I++ C+ ++ +
Sbjct: 109 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 168
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEK-CRPNRTIYGIYLE 479
+ L+ E G P + SY L N G M D L L F E E+ P+ Y I ++
Sbjct: 169 KELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKL-FDEMPERGVTPDVACYNILID 227
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G+I A EI+ + ++ N S N++++ G F ++ +I+ M
Sbjct: 228 GFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRM 281
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 101/231 (43%), Gaps = 6/231 (2%)
Query: 270 GLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
GL K YL +A I ++ YS +I + +D+ ++ + +M + G
Sbjct: 403 GLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDE--VAGVLDQMTKHGC 460
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSL 387
+ V +V+ + +EDA + + ++ S PT + + +K F ++
Sbjct: 461 KPNPHVCNAVINGFVRASKLEDALRFFGNMV-SKGCFPTVVTYNTLINGLSKAERFSEAY 519
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
+ +EM + ++ Y ++ LC+ ++ ++ +L + +E G KP + + + +
Sbjct: 520 ALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 579
Query: 448 LNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ G + D L L KC PN + +E + E+A +I++H+
Sbjct: 580 CSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 630
>gi|449433429|ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g16890, mitochondrial-like
[Cucumis sativus]
Length = 688
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 98/212 (46%), Gaps = 6/212 (2%)
Query: 325 QAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGE 382
Q+G + G L+++ K G +E + RL+ ++G+ + + Y M + K
Sbjct: 423 QSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLI--NDGLISNIYSYNMVIDCLCKGKS 480
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
++ E+FR++ R S ++ Y+ +I C+ + + L++ +E+ +P + ++ +
Sbjct: 481 MDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNS 540
Query: 443 LTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQ 501
L + H+ F+E +E PN Y I + S G++ ++ + M
Sbjct: 541 LIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKL-H 599
Query: 502 TIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
I +T S N ++ Y F KAEK++D M
Sbjct: 600 GIQPDTFSFNALIQGYTGKNRFQKAEKLFDSM 631
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 115/286 (40%), Gaps = 13/286 (4%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
PS TF+I + L + L C++++ +Q G +P S + +L AL K G +
Sbjct: 393 PSSSTFNITLACVLK---KLDLKVTCTVFDNCVQ-SGVKPGFSTYLTLIEALY-KAGKM- 446
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ L+ GL +IYS + + +R S + +++ G
Sbjct: 447 ----EIGNRYMDRLINDGL--ISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNI 500
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
+++ + G+++ A++ LLES F ++ + + + F E
Sbjct: 501 VTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTE 560
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
M E +V Y+ +I C + + L+++ G++P S+ L Y
Sbjct: 561 MVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNR 620
Query: 453 HDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ F L +P+ YG ++SL +G +KA EIF M
Sbjct: 621 FQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSM 666
>gi|357138098|ref|XP_003570635.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Brachypodium distachyon]
Length = 519
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 164/429 (38%), Gaps = 96/429 (22%)
Query: 131 LVRILNAQKKWLRQEDGTYLAVHCMRIRENETG--------FRVYEWMMQQHWYRFDFAL 182
LV +L+ K +R E HC + E E G ++ WM +Q WY D +
Sbjct: 63 LVAVLDRHVKVVRTE-------HCFLLFE-ELGRHDGWVQCLEIFRWMQKQRWYVADNGI 114
Query: 183 ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYL-SAPVQGCLDEACSIY 241
+KL MGK+ + +F + N G P ++ LI A+L S L +A +
Sbjct: 115 YSKLISVMGKKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKSKALAKALGYF 174
Query: 242 NRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
++M + QP +N L RA +Q E +F +L S + DIY
Sbjct: 175 DKMKTIERCQPNIVTYNILLRACARASDA------KQVEILFKDLDES--LVTPDIY--- 223
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
+Y ID G+ K G +++ E +R+
Sbjct: 224 ----TYNGVID--------------GY--------------GKNGMIKEMESVLVRMKSK 251
Query: 362 DNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
F +++Y + F K ++F+ + + P ++ +I KA E
Sbjct: 252 QCRPDVITFNILIDSYGRKQIFDKMEQVFKSLLRSKERPTHPTFNSMITNYGKARLKEKA 311
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESL 481
ES++++ E G KP + L MY A+ +C
Sbjct: 312 ESVLEKMDELGFKPSYVTQECLIMMY-----------AYCDC------------------ 342
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIE 541
+ KA++IF+ + + Q+ V S N +L AY + ++A+++ D ++K +
Sbjct: 343 -----VSKAQQIFDELVNSQST-VPLSSLNAMLDAYCMNRLPMEADRLLD-AAIEKGVVP 395
Query: 542 SAWMEKLDY 550
A KL Y
Sbjct: 396 GASTYKLLY 404
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 105/265 (39%), Gaps = 47/265 (17%)
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQ 294
D+A I+ RM ++ G QP +NSL AL+ +K+ +AE F T GL
Sbjct: 95 DQALDIFQRMHEIFGCQPGIRSYNSLLNALIES----NKW--DEAESFFLYFETMGLSPN 148
Query: 295 KDIYSGLIWLHSYQDNIDKER---------------------ISLLKK------------ 321
Y+ LI + + DK + I+ L K
Sbjct: 149 LQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFD 208
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT-PAFVYKMEAYAKI 380
EM + G ++ K+GD+ +A + W RLL+ + P P++ + K
Sbjct: 209 EMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKC 268
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G+F +S EI+ M++ + Y +I LC + + + KE E G+ P + Y
Sbjct: 269 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 328
Query: 441 INLTNMYLNLGMHDRLHLAFSECLE 465
+ N YL G ECLE
Sbjct: 329 NTMLNGYLRAG-------RIEECLE 346
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ + + + +L F M + +V Y+ +I L KAE +L+KE + G
Sbjct: 471 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW 530
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFS---ECLEKC-RPNRTIYGIYLESLKNAGNIEK 489
KP M +Y L N L +L +A + + LEK +P+ ++ I + L ++G +E
Sbjct: 531 KPNMITYSLLMN---GLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 587
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
A ++++ M + + N + N ++ + DF +A KI+D
Sbjct: 588 ALQLYSEMKQRKCVP-NLVTHNTLMEGFYKVRDFERASKIWD 628
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 126/294 (42%), Gaps = 27/294 (9%)
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
R+I+L + P S+F ++ PG ++FH++L K ++ +
Sbjct: 12 RVIKLLKSEKNPHSALSIFDSVTRFPG------YSHTPYVFHHIL-------KRLFDPKL 58
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
H +S + + ++ + ++V L+V++ AK + A + R+ E
Sbjct: 59 VAH----------VSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIF 108
Query: 363 NGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
P ++ + A + ++ ++ F + S ++ Y+ +I++ C+ ++ +
Sbjct: 109 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 168
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEK-CRPNRTIYGIYLE 479
+ L+ E G P + SY L N G M D L L F E E+ P+ Y I ++
Sbjct: 169 KELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKL-FDEMPERGVTPDVACYNILID 227
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G+I A EI+ + ++ N S N++++ G F ++ +I+ M
Sbjct: 228 GFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRM 281
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 101/231 (43%), Gaps = 6/231 (2%)
Query: 270 GLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
GL K YL +A I ++ YS +I + +D+ ++ + +M + G
Sbjct: 403 GLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDE--VAGVLDQMTKHGC 460
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSL 387
+ V +V+ + +EDA + + ++ S PT + + +K F ++
Sbjct: 461 KPNPHVCNAVINGFVRASKLEDALRFFGNMV-SKGCFPTVVTYNTLINGLSKAERFSEAY 519
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
+ +EM + ++ Y ++ LC+ ++ ++ +L + +E G KP + + + +
Sbjct: 520 ALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 579
Query: 448 LNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ G + D L L KC PN + +E + E+A +I++H+
Sbjct: 580 CSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 630
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 100/232 (43%), Gaps = 2/232 (0%)
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
D+ + I +H Y + E L EM G E SV+ + EG V DA +
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343
Query: 356 LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
++ + F M + + G+ + F EMQ+R +A Y +I LC+A
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIY 474
E + E +++E + G+ +Y L + Y +G L ++ ++K PN Y
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
+ L G++ A E+ + M S + + +N + N +++ +G+ +A
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCS-KGLELNIFTYNSLINGLCKAGNLEQA 514
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 117/285 (41%), Gaps = 8/285 (2%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
L++AE + + GL++ Y+ LI Y L+ +M Q
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLI--DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM 393
++ K+GDV A + + G+ F Y + K G +++ +M
Sbjct: 464 TALSDGLCKQGDVCAANELLHEM--CSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
E V Y II LC+++E + SL++E ++ G+KP + +Y L N + G
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581
Query: 454 DRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI 512
+ LEK PN T Y ++ N++ EI+ M S + + N + NI
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVP-NENTYNI 640
Query: 513 ILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRK 557
++ + + + +A + M K + + ++ L +L+ +K
Sbjct: 641 LIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
CM R E G R+ EWM++++ + + + Y E+ +I+ +++Q VP
Sbjct: 576 CMSGRV-EGGKRLLEWMLEKNIHPNTTTYNSLMKQYC-IEKNMKSTTEIYKGMLSQEVVP 633
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK 273
+E T++ILI + A + EA ++ MI+ G++ S +N+L R L++K K
Sbjct: 634 NENTYNILIKGHCKA---RNMKEALYFHSEMIE-KGFRLTASSYNALIR-LLNK-----K 683
Query: 274 YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+A +F + L + D+Y+ I L +DN++
Sbjct: 684 KKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLE 722
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 117/257 (45%), Gaps = 14/257 (5%)
Query: 187 ADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQ 246
A +M + A+C + +I +G P +T++ILI Y +A +++ M+
Sbjct: 370 ALFMEQRTDEAEC--MIKEIQEKGISPDAITYNILINGYCRC---ANAKKAFLLHDEMLA 424
Query: 247 LGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHS 306
G +P + SL L K +++A+ +F + + G+ +++ LI H
Sbjct: 425 -SGIKPTKKTYTSLLHVLSKK------NRMKEADDLFKKITSEGVLPDAIMFNALIDGHC 477
Query: 307 YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
N+ K LLK +M + + ++++ +EG VE+A + + +
Sbjct: 478 SNSNV-KGAFELLK-DMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535
Query: 367 TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
+F + Y++ G+ + + EM + + +V Y+ +++ LCK +E +L E L+K
Sbjct: 536 HISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLK 595
Query: 427 EFVETGMKPLMPSYINL 443
E V GM P +Y L
Sbjct: 596 EMVSKGMTPDDTTYFTL 612
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 151/386 (39%), Gaps = 27/386 (6%)
Query: 155 MRIRENETGFRVYEWM----MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQG 210
+++ E + +Y M ++ Y F+ + + + KE K K +D + G
Sbjct: 197 LKLNRTEAAWVLYAEMFRLRIKSSVYTFNI-----MINVLCKEGKLKKAKDFVGHMETSG 251
Query: 211 RVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGG 270
P+ +T++ ++ Y S+ G ++ A +I M + +P + SL G
Sbjct: 252 VKPNIVTYNTIVHGYCSS---GRVEAADAILTTM-KRQKIEPDSFTYGSLIS------GM 301
Query: 271 LSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE 330
+ L++A IF ++ GL IY+ LI + N+D S K EM + G
Sbjct: 302 CKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA--SAYKDEMLKKGISP 359
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLE 388
S++ E ++AE + E GI A Y + Y + K+
Sbjct: 360 TMSTYNSLIHALFMEQRTDEAECMIKEIQE--KGISPDAITYNILINGYCRCANAKKAFL 417
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+ EM + Y ++ +L K + + L K+ G+ P + L + +
Sbjct: 418 LHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHC 477
Query: 449 -NLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
N + L K P+ + ++ G +E+A E+F+ M + I +
Sbjct: 478 SNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKR-RGIKPDH 536
Query: 508 RSCNIILSAYLSSGDFVKAEKIYDLM 533
S N ++S Y GD A ++ + M
Sbjct: 537 ISFNTLISGYSRRGDIKDAFRVRNEM 562
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 129/314 (41%), Gaps = 45/314 (14%)
Query: 160 NETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFH 219
N GF + W+ +Q ++ D T + +G+ ++F + + D+++ G P+ +T++
Sbjct: 341 NALGF--FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYN 398
Query: 220 ILIVAYLSAPV-------------QGC-------------------LDEACSIYNRMIQL 247
LI +Y A GC LD A +Y RM Q
Sbjct: 399 RLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QE 457
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
G P ++ + L K G +L A +F ++ G ++ +I LH+
Sbjct: 458 AGLSPDTFTYSVIINCL-GKAG-----HLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAK 511
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
N E L ++MQ AGF+ K V+ V G +E+AE + ++ N +P
Sbjct: 512 ARNY--ETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAE-MQRKNWVPD 568
Query: 368 -PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
P + ++ + K G K+ + ++ M + +VP + ++ + +L++
Sbjct: 569 EPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQ 628
Query: 427 EFVETGMKPLMPSY 440
+ G+ P + +Y
Sbjct: 629 SMLALGLHPSLQTY 642
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 110/237 (46%), Gaps = 10/237 (4%)
Query: 286 LLTSGLEIQKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
++ G + Y+ LI HSY + N KE +++ +MQ+AG E + +++ + AK
Sbjct: 385 MVRDGCKPNTVTYNRLI--HSYGRANYLKEAMNVFN-QMQEAGCEPDRVTYCTLIDIHAK 441
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASV 402
G ++ A + R+ E+ G+ F Y + K G + +F EM + + ++
Sbjct: 442 AGFLDIAMDMYQRMQEA--GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNL 499
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
++ +I L KA E L ++ G +P +Y + + + G + F+E
Sbjct: 500 VTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAE 559
Query: 463 CLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
K P+ +YG+ ++ AGN++KA + + M + N +CN +LS +L
Sbjct: 560 MQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAM-LQAGLRPNVPTCNSLLSTFL 615
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 156/394 (39%), Gaps = 23/394 (5%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M H D L DY+ K + + R FD + +G P + IL+ Y +
Sbjct: 257 MSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYAT--- 313
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G L E S + M+ G P + N +F A K +++A IF+ + G
Sbjct: 314 KGALSEMHSFLDLMVG-NGVSPNRRIFNIMFCAYAKKA------MIEEAMHIFNKMRQQG 366
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
L + LI +D + +M G V S++ G E
Sbjct: 367 LSPDVVSFGALIDALCKLGRVDDAVLQF--NQMINEGVTPNIFVFSSLVYGLCTVGKWEK 424
Query: 351 AEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHK 407
AE+ + +L D GI A + M G M++ + ++ R+G +V +Y+
Sbjct: 425 AEELFFEVL--DQGICVDAVFFNTLMCNLCNEGRVMEAQRLI-DLMIRVGVRPNVISYNT 481
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK- 466
++ C + L+ V G+KP +Y L Y D + F E L K
Sbjct: 482 LVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKG 541
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFV-K 525
P Y L L G +A E++ +M + +T + + NIIL+ L +FV +
Sbjct: 542 VTPVVATYNTILHGLFQTGRFSEANELYLNMINSRT-KCDIYTYNIILNG-LCKNNFVDE 599
Query: 526 AEKIYDLMCLKKYEIESAWME-KLDYVLSLNRKE 558
A K++ +C K +++S + +L RKE
Sbjct: 600 AFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKE 633
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 154/348 (44%), Gaps = 24/348 (6%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
+E + K ++F ++++QG P+ +T+ +I A V +D A ++ +MI G +
Sbjct: 173 REGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV---VDRAKGVFQQMIDRG-VK 228
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P +N L +S G K +Q E + T GLE D + + L N
Sbjct: 229 PDNGTYNCLIHGYLST--GKWKEVVQMLE----EMSTHGLE--PDCITYALLLDYLCKNG 280
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
L M + G + + +L A +G + + ++L L+ NG+ +
Sbjct: 281 RCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMH-SFLDLMVG-NGVSPNRRI 338
Query: 372 YKME--AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
+ + AYAK +++ IF +M+++ S V ++ +I+ LCK + + +
Sbjct: 339 FNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMI 398
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNI 487
G+ P + + +L +G ++ F E L++ C + + + +L N G +
Sbjct: 399 NEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGIC-VDAVFFNTLMCNLCNEGRV 457
Query: 488 EKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+A+ + + M +GV N S N +++ + +G +A K+ D+M
Sbjct: 458 MEAQRLIDLMIR---VGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVM 502
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 4/187 (2%)
Query: 350 DAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
D L L S+ G P Y + + + G+ K+ +F EM ++ +V Y
Sbjct: 142 DEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTT 201
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE-CLEK 466
+I+ LCKA+ + + + ++ ++ G+KP +Y L + YL+ G + E
Sbjct: 202 VIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHG 261
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
P+ Y + L+ L G +A F+ M + I + I+L Y + G +
Sbjct: 262 LEPDCITYALLLDYLCKNGRCREARLFFDSMFR-KGIKPDVAIYAILLHGYATKGALSEM 320
Query: 527 EKIYDLM 533
DLM
Sbjct: 321 HSFLDLM 327
>gi|167998294|ref|XP_001751853.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696951|gb|EDQ83288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 657
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 153/400 (38%), Gaps = 49/400 (12%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
+++ WM +Q R + L G+ ++F+++ G P +TF L+
Sbjct: 227 ALKLFRWMEKQGIERPIYTF-NALMVACGRCGAGDTAVELFEEMKELGLAPDNITFRGLV 285
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
A +A G A S N ++Q GG+ + A L QA
Sbjct: 286 SATTAA---GKWKAAQSFIN-LMQAGGFSFAIGEFTEMQWACARARNSRESLGLLQA--- 338
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
++ G E + + Y+ L L +Y+ + E +Q+ GF S+L C
Sbjct: 339 ---MIEQGCEPRLENYNAL--LCAYEKTANWEEAVRTVVWIQEKGFTPDFITWSSLLGAC 393
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREM--------- 393
A G E A ++ E++ ++ Y ++AY K G + K+ EIF M
Sbjct: 394 ANAGQAEKAVAVMEKMKENNFTPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLNSGCPPNE 453
Query: 394 -------------------------QERLG-SASVPAYHKIIELLCKAEETELTESLMKE 427
QE LG V A+ I L KA + +L E +++
Sbjct: 454 VAWNSLLSAYEKGRQWKRVLYTIEKQEELGVKLDVVAWSTTISALAKAGQWQLAEKKIRQ 513
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF-SECLEKCRPNRTIYGIYLESLKNAGN 486
++G +P + +Y +L Y ++G+ ++ F S LE RP+ L +
Sbjct: 514 MKQSGCQPNIVTYSSLIKAYGDVGLWNKAESVFKSMLLEGIRPDSKACCALLRAYAKGRQ 573
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
++K F+ M I + + I A + G++ +A
Sbjct: 574 LDKVMFFFDSMMPRYGIKPDKYAYAAIFWACWTCGEWQRA 613
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 122/300 (40%), Gaps = 22/300 (7%)
Query: 206 IINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV 265
I +G P +T+ L+ A +A G ++A ++ +M + + P L +A
Sbjct: 374 IQEKGFTPDFITWSSLLGACANA---GQAEKAVAVMEKMKE-NNFTPNVVSWCYLLKAY- 428
Query: 266 SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
K G K E IFH++L SG + ++ L L +Y+ +R+ ++ ++
Sbjct: 429 QKTGNWEK-----TEEIFHSMLNSGCPPNEVAWNSL--LSAYEKGRQWKRVLYTIEKQEE 481
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMK 385
G + + + AK G + AEK ++ +S + ++AY +G + K
Sbjct: 482 LGVKLDVVAWSTTISALAKAGQWQLAEKKIRQMKQSGCQPNIVTYSSLIKAYGDVGLWNK 541
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETE----LTESLMKEFVETGMKPLMPSYI 441
+ +F+ M A ++ K + + +S+M + G+KP +Y
Sbjct: 542 AESVFKSMLLEGIRPDSKACCALLRAYAKGRQLDKVMFFFDSMMPRY---GIKPDKYAYA 598
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+ G R + E +E C P+ IY + + G ++KA EI M +
Sbjct: 599 AIFWACWTCGEWQRAA-DYMENMEAAGCTPDTMIYTTLITMYEAHGQVDKAMEILKKMDN 657
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 146/347 (42%), Gaps = 22/347 (6%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
KE + K +F +++ QG P +T++ LI A +D+A +I M G
Sbjct: 212 KEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQA---MDKAVAILQHMFD-KGVM 267
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P +N + R G S L++A + + SGL+ YS LI +
Sbjct: 268 PDTRTYNIMIR------GYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRC 321
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP--A 369
+ R M + G + + +L A +G + D + L L+ D GIP A
Sbjct: 322 AEARSVF--DSMVRKGQKPNSTIYHILLHGYATKGALIDV-RDLLDLMIRD-GIPFEHRA 377
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
F + AYAK G K++ F EM++ V +Y +I +LCK E + V
Sbjct: 378 FNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMV 437
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRL-HLAFSECLEKCRPNRTIYGIYLESLKNAGNIE 488
G+ P + S+ +L + ++G ++ LAF P+ +++L G +
Sbjct: 438 SEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVV 497
Query: 489 KAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+A++ F+ + IGV + S N ++ Y G ++ K D M
Sbjct: 498 EAQDFFDMVIH---IGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRM 541
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 129/353 (36%), Gaps = 49/353 (13%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D + L Y K + A+ R +FD ++ +G+ P+ +HIL+ Y + +G L +
Sbjct: 304 DVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYAT---KGALIDVR 360
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
+ + MI+ G+ + +
Sbjct: 361 DLLDLMIR------------------------------------------DGIPFEHRAF 378
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+ LI ++ +DK + EM+Q G +V+ + K G VEDA + ++
Sbjct: 379 NILICAYAKHGAVDKAMTAF--TEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQM 436
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
+ +F + IGE+ K E+ EM R + I++ LCK
Sbjct: 437 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 496
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIY 477
+ + G+KP + SY L + Y +G D + RP+ Y
Sbjct: 497 VEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSL 556
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
L G +E A ++ M + + + NI+L +G V A ++Y
Sbjct: 557 LNGYFKNGRVEDALALYREMFR-KDVKFCAITSNIMLHGLFQAGRIVAARELY 608
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
++ + K GE K+ +F EM + V Y+ +I+ LCKA+ + ++++ + G+
Sbjct: 207 IDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGV 266
Query: 434 KPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
P +Y + Y +LG + + + L +P+ Y + ++ G +A
Sbjct: 267 MPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARS 326
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+F+ M + N+ +I+L Y + G + + DLM
Sbjct: 327 VFDSM-VRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 366
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 128/307 (41%), Gaps = 37/307 (12%)
Query: 164 FRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIV 223
F+ + M+ Y D T L D + K R F + FD + QG +P+ T++ LI
Sbjct: 351 FKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLIC 410
Query: 224 AYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY-------- 275
L A G +++A + M + G QP +N +F K G K
Sbjct: 411 GLLRA---GRIEDALKLLGTMESV-GVQPTAYTYN-IFIDYFGKSGETGKAVETFEKMKA 465
Query: 276 ----------------------LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
L++A+ +F+ L +GL Y+ ++ +S +D
Sbjct: 466 KGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVD- 524
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
E ++LL EM + G E V+ S++ K G V++A + + R+ + +
Sbjct: 525 EAVNLL-SEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTL 583
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ K G K++E+F M E+ S + +++ +++ CK +E EL + +
Sbjct: 584 LSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDC 643
Query: 434 KPLMPSY 440
KP + +Y
Sbjct: 644 KPDVLTY 650
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 117/305 (38%), Gaps = 46/305 (15%)
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
++G L + ++ N+M + G+ +N L L+ + +A ++ +++
Sbjct: 169 IRGGLRQMTTVLNKM-RKAGFVLNAYSYNGLIHLLIQSG------FCGEALEVYRRMVSE 221
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
GL+ YS L+ + D E + +L KEM+ G +RV + G ++
Sbjct: 222 GLKPSLKTYSALMV--ALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKID 279
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
EAY EIFR M + + Y +I
Sbjct: 280 -------------------------EAY----------EIFRRMDDEGCGPDLVTYTVLI 304
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCR 468
+ LC A + E + L + G KP YI L + + + G D +S+ +
Sbjct: 305 DALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYM 364
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
P+ + I ++ L A + ++A F+ M Q I N + N ++ L +G A K
Sbjct: 365 PDVVTFTILVDVLCKARDFDEAFATFDVMRK-QGILPNLHTYNTLICGLLRAGRIEDALK 423
Query: 529 IYDLM 533
+ M
Sbjct: 424 LLGTM 428
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 124/314 (39%), Gaps = 39/314 (12%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
D+F D+ N G P TF++L+ + + G + E +Y MI +P +N +
Sbjct: 809 DLFKDMKNVGCAPDAFTFNMLLAVHGKS---GKITELFELYKEMIS-RRCKPDAITYNIV 864
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK----ERI 316
+L L +A F++L++S Y LI D + K E
Sbjct: 865 ISSLAKSNN------LDKALDFFYDLVSSDFRPTPRTYGPLI------DGLAKVGRLEEA 912
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEA 376
L +EM G + + ++ K GD E A + + R++ ++ ++
Sbjct: 913 MRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDC 972
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
G ++L F E++ AY++II L K++ E +L E G+ P
Sbjct: 973 LCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPD 1032
Query: 437 MPSYINLTNMYLNLG----------MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGN 486
+ +Y ++ LNLG M++ L LA E P+ Y + + N
Sbjct: 1033 LYTY---NSLMLNLGLAGMVEQAKRMYEELQLAGLE------PDVFTYNALIRGYSLSEN 1083
Query: 487 IEKAEEIFNHMHSD 500
E A ++ +M D
Sbjct: 1084 PEHAYTVYKNMMVD 1097
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 110/265 (41%), Gaps = 11/265 (4%)
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
A I+++ + G P + +N L L L +Y ++A +F ++ G
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGEL------LEVHYTEKAWDLFKDMKNVGCAPDAF 824
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
++ L+ +H I + + L KEM + V+ AK +++ A +
Sbjct: 825 TFNMLLAVHGKSGKITE--LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFY 882
Query: 357 RLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
L+ SD PTP + ++ AK+G +++ +F EM + + ++ +I K
Sbjct: 883 DLVSSDFR-PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIY 474
+TE L K V G++P + SY L + G D F+E P+ Y
Sbjct: 942 GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHS 499
+ L + +E+A ++N M +
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRN 1026
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 132/310 (42%), Gaps = 27/310 (8%)
Query: 240 IYNRMIQLGGYQPRPSLHNSLF---------------RALVSKPGGLSKYYLQQAEFIFH 284
IYN MI+L R LF A+++ G ++ + A I
Sbjct: 153 IYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAHGRAGQW--RWAMNIMD 210
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCA- 343
++L + + + Y+ LI N KE +++ KK M + G G +++ + + A
Sbjct: 211 DMLRAAIPPSRSTYNNLINACGSSGNW-KEALNVCKK-MTENGV--GPDLVTHNIILSAF 266
Query: 344 KEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSAS- 401
K G ++ L++ + P T + K+ ++ K++EIF M+E+ +
Sbjct: 267 KSGAQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSECTP 326
Query: 402 -VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
V + II L + E E+ + G+KP + SY L Y GM + HL F
Sbjct: 327 DVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFF 386
Query: 461 SECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
+E + RP+ Y L + + KA +IF+ M ++ + N S N ++ AY S
Sbjct: 387 NEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNK-LKPNLVSYNALIDAYGS 445
Query: 520 SGDFVKAEKI 529
+G A KI
Sbjct: 446 NGLLADAIKI 455
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 155/378 (41%), Gaps = 22/378 (5%)
Query: 150 LAVHCM-RIRENETGFRVYEWMMQQHW-YRFDFALATKLADYMGKERKFAKCRDIFDDII 207
+ +HC+ ++R+ + ++ M ++ D T + + C F+ +I
Sbjct: 296 IVIHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMI 355
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL--V 265
+G P+ ++++ LI AY +G +EA +N + Q G++P + SL A
Sbjct: 356 AEGLKPNIVSYNALIGAY---AARGMDNEAHLFFNEIKQ-NGFRPDIVSYTSLLNAYGRS 411
Query: 266 SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN-IDKERISLLKKEMQ 324
KP +A IF + + L+ Y+ LI +Y N + + I +L+ EM+
Sbjct: 412 QKP--------HKARQIFDRMKRNKLKPNLVSYNALI--DAYGSNGLLADAIKILR-EME 460
Query: 325 QAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFM 384
Q G + + ++L C + + + T A+ + + +GE+
Sbjct: 461 QEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYD 520
Query: 385 KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT 444
K++ +++ M+++ Y +I CK + S M+E + + Y +
Sbjct: 521 KAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAI 580
Query: 445 NMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
Y G F+ C P+ Y L++ A N EKA +F M + +I
Sbjct: 581 CAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEA-SSI 639
Query: 504 GVNTRSCNIILSAYLSSG 521
++T +C ++ ++ G
Sbjct: 640 KLDTIACAALMRSFNKGG 657
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 90/445 (20%), Positives = 179/445 (40%), Gaps = 30/445 (6%)
Query: 110 QWRRAKLAWLCKELPSHKGGT-----LVRILNAQKKWLRQEDGTYLAVHCMRIRENETG- 163
++ R +L KEL + +G + R L QK + R + Y + + R N T
Sbjct: 112 RFARKNFPFLIKEL-TQRGSIEHCNRVFRWLKNQKNY-RARNDIYNMMIRLHARHNRTDQ 169
Query: 164 FRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIV 223
R + MQ+ + D + + G+ ++ +I DD++ PS T++ LI
Sbjct: 170 ARGLFFEMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLIN 229
Query: 224 AYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN---SLFRALVSKPGGLSKYYLQQAE 280
A S+ G EA ++ +M + G P HN S F++ LS + L +
Sbjct: 230 ACGSS---GNWKEALNVCKKMTE-NGVGPDLVTHNIILSAFKSGAQYSKALSYFELMKGT 285
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL--SV 338
I + T + I L+ L Y I+ + M++ E +V+ S+
Sbjct: 286 HIRPDTTTLNIVIH-----CLVKLRQYDKAIE------IFNSMREKKSECTPDVVTFTSI 334
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
+ + + G VE+ E + ++ ++ + AYA G ++ F E+++
Sbjct: 335 IHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGF 394
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM-HDRLH 457
+ +Y ++ ++++ + +KP + SY L + Y + G+ D +
Sbjct: 395 RPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIK 454
Query: 458 LAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
+ E +PN L + K + + + I +NT + N + +
Sbjct: 455 ILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEM-RGIKLNTVAYNAAIGSC 513
Query: 518 LSSGDFVKAEKIYDLMCLKKYEIES 542
++ G++ KA +Y M KK + +S
Sbjct: 514 MNVGEYDKAIGLYKSMRKKKIKTDS 538
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 119/272 (43%), Gaps = 17/272 (6%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ TF +I + +G + +A +++ M+++ G P +N+L LV K
Sbjct: 191 PTTRTFMPIIHGFAR---KGEMKKALDVFD-MMRMSGCIPTVHTYNALILGLVEK----- 241
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+++AE I + +G+ + Y+ + +H Y D + +++ G +
Sbjct: 242 -RKMEKAEQILDEMTLAGVSPNEHTYTTI--MHGYASLGDTGKAFAYFTKLRDEGLQLDV 298
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIF 390
++L+ C K G ++ A + S IP F+Y + + +A+ G+ ++ ++
Sbjct: 299 YTYEALLKACCKSGRMQSALAVTKEM--SAQNIPRNTFIYNILIDGWARRGDVWEAADLM 356
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
++M+ + Y I KA + + ++E G+KP + +Y L N +
Sbjct: 357 QQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARA 416
Query: 451 GMHDRLHLAFSEC-LEKCRPNRTIYGIYLESL 481
+ ++ F E L +P+R +Y + SL
Sbjct: 417 SLPEKALSCFEEMKLSGLKPDRAVYHCLMTSL 448
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 106/241 (43%), Gaps = 6/241 (2%)
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
IY +I+ + + N+DK L +EM++ G + ++ +++ GD + +
Sbjct: 20 IYGNIIYAYCQRCNMDKAEA--LVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFE 77
Query: 357 RLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
R E + + YAK+G+ K+LE+ +EM+ ++ Y +I K +
Sbjct: 78 RFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLK 137
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIY 474
+ ++ ++ ++ G+KP + Y N+ + +G DR E ++K R P +
Sbjct: 138 DWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKE-MQKQRHKPTTRTF 196
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
+ G ++KA ++F+ M I + N ++ + KAE+I D M
Sbjct: 197 MPIIHGFARKGEMKKALDVFDMMRMSGCIPT-VHTYNALILGLVEKRKMEKAEQILDEMT 255
Query: 535 L 535
L
Sbjct: 256 L 256
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 2/168 (1%)
Query: 367 TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
T F+ + +A+ GE K+L++F M+ +V Y+ +I L + + E E ++
Sbjct: 193 TRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILD 252
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAG 485
E G+ P +Y + + Y +LG + F++ E + + Y L++ +G
Sbjct: 253 EMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSG 312
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++ A + M S Q I NT NI++ + GD +A + M
Sbjct: 313 RMQSALAVTKEM-SAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQM 359
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 127/323 (39%), Gaps = 17/323 (5%)
Query: 178 FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEA 237
D T + D++ K +K + + + I G P+ T++ L+ G L+EA
Sbjct: 32 IDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCK---MGRLEEA 88
Query: 238 CSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI 297
+ +++ G P + SL L K Y L F + + GL +
Sbjct: 89 IDLLRKIVD-NGCTPDVVTYTSLIDGLGKKKRSFEAYKL------FKEMASRGLALDTVC 141
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
Y+ LI I + S + K M G L +++ K G + A + + +
Sbjct: 142 YTALIRGLLQAGKIPQA--SSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIF-K 198
Query: 358 LLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
+E+ G+ VY + K + +LE+ +M++ + Y+ +I+ LCK+
Sbjct: 199 SMEA-RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKS 257
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE-CLEKCRPNRTIY 474
+ + E +E G KP + +Y L + + G D F + +C PN Y
Sbjct: 258 GDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTY 317
Query: 475 GIYLESLKNAGNIEKAEEIFNHM 497
G + L + KA + HM
Sbjct: 318 GTLISGLCKRRQLTKASLYYQHM 340
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 112/283 (39%), Gaps = 25/283 (8%)
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
I G P + +N+L L K G L++A + ++ +G Y+ LI
Sbjct: 60 ITANGCTPTIATYNALLNGLC-KMG-----RLEEAIDLLRKIVDNGCTPDVVTYTSLI-- 111
Query: 305 HSYQDNIDKERISL----LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
D + K++ S L KEM G +++R + G + A + + +
Sbjct: 112 ----DGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVY-KTMT 166
Query: 361 SDNGIPTPAFVYKM-EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
S +P + M + K G ++ IF+ M+ R + + Y +I LCKA + +
Sbjct: 167 SQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 226
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYL 478
++ + + P +Y L + G F E LE C+P+ Y I +
Sbjct: 227 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILI 286
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
AGN + A +F+ M S + S N++ L SG
Sbjct: 287 SGFCKAGNTDAACGVFDDMSSSRC------SPNVVTYGTLISG 323
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 152/337 (45%), Gaps = 17/337 (5%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
+M+++ ++ T L ++ + K + +FD+++ +G P + +I
Sbjct: 252 LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKF- 310
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNS-LFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
G + A +++ M + R + N+ + AL++ G ++ AE + +++ +
Sbjct: 311 --GNMKRAFVLFDEMTE------RRLVPNAYTYGALIN--GACKAGEMKAAEMMVNDMQS 360
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
G+++ + I++ L+ + + ID+ L+ MQQ GFE + +
Sbjct: 361 KGVDVNRVIFNTLMDGYCKKGMIDEAL--RLQNIMQQKGFEIDAFTCNIIASGFCRSNRR 418
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
E+A++ L + E +F ++ Y K F ++ +F+ M+++ + SV Y+
Sbjct: 419 EEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAF 478
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR 468
IE CK + E L+ E E G+ P +Y +L + G DR F+E + +
Sbjct: 479 IERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNE-MPQLG 537
Query: 469 PNRTI--YGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
NR + Y + + L G ++A ++++ M+ + +
Sbjct: 538 LNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIV 574
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
A + G +E R+M + V ++ +++ LCK E ++LM E V G KP
Sbjct: 166 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 225
Query: 436 LMPSYINLTNMYLNL----GMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAE 491
+ +Y L N Y+ + G+++ L L ++ N T Y + +E + IE+AE
Sbjct: 226 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDY---NVTTYTMLIEWYSRSSKIEEAE 282
Query: 492 EIFNHM 497
++F+ M
Sbjct: 283 KLFDEM 288
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 142/339 (41%), Gaps = 46/339 (13%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
K D+ +++ +G P+ + LI Y +G + AC I+++M ++ P +
Sbjct: 472 KASDLLEEMTTKGLKPNAFVYAPLISGYCR---EGNVSLACEIFDKMTKVN-VLPDLYCY 527
Query: 258 NSLFRALVSKPGGL---SKYY---------------------------LQQAEFIFHNLL 287
NSL L SK G + +KY+ L+ AE + +L
Sbjct: 528 NSLIFGL-SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 586
Query: 288 TSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGD 347
+GL+ IY L L SY + D E++S K M G + ++ + G+
Sbjct: 587 DTGLKPNDVIYIDL--LESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN 644
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
+E A + L +E + +P VY + K + K+ I EM ++ ++ Y
Sbjct: 645 MEAAFRV-LSGIEKNGSVPD-VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCY 702
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE 465
+ +I+ LCK+ + ++ + G+ P +Y +L + +G ++E L
Sbjct: 703 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 762
Query: 466 K-CRPNRTIYGIYLESLKNAGNIEKA----EEIFNHMHS 499
P+ +Y + +AG++E+A EE+F H+
Sbjct: 763 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA 801
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 166/409 (40%), Gaps = 39/409 (9%)
Query: 132 VRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMG 191
+R NA K L + D L ++V E+M+ + +T + Y
Sbjct: 209 IRCCNALLKDLLRADAMALL------------WKVREFMVGAGISPDVYTYSTLIEAYC- 255
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K R+F + + ++ +G + +T+++LI + G ++EA + + ++ G
Sbjct: 256 KVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRS---GAVEEAFG-FKKDMEDYGLV 311
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P + +L L +A+ + + + L+ +Y+ LI + N
Sbjct: 312 PDGFTYGALINGLCKSRRS------NEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 365
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
D E ++K EM AG + K +++R K G ++ A +++ + T +
Sbjct: 366 D-EAFKMIK-EMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 423
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
+E + + + + EM+ S +V Y +I LC++ E E L++E
Sbjct: 424 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 483
Query: 432 GMK-------PLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNA 484
G+K PL+ Y N+ L + D++ P+ Y + L
Sbjct: 484 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV------NVLPDLYCYNSLIFGLSKV 537
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G +E++ + F M ++ + N + + ++ YL +GD AE++ M
Sbjct: 538 GRVEESTKYFAQMQ-ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 585
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 123/326 (37%), Gaps = 67/326 (20%)
Query: 203 FDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFR 262
F + +G +P+E T+ LI YL G L+ A + RM+ G +P ++ L
Sbjct: 547 FAQMQERGLLPNEFTYSGLIHGYLK---NGDLESAEQLVQRMLDTG-LKPNDVIYIDLLE 602
Query: 263 AL-----VSKPGGLSKYYLQQA--------EFIFHNLLTSG-LEIQKDIYSGL------I 302
+ + K K L Q + HNL +SG +E + SG+
Sbjct: 603 SYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVP 662
Query: 303 WLHSYQDNI-------DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK-- 353
+H Y I D+E+ + EM + G + +++ K GD+ A
Sbjct: 663 DVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 722
Query: 354 -------------TWLRLLESD------------------NGIPTPAFVYKM--EAYAKI 380
T+ L++ GI AFVY + +
Sbjct: 723 NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 782
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G+ +++ + EM R G AS+ +++ +++ CK + + T L+ + G+ P +
Sbjct: 783 GDLEQAMFLIEEMFLR-GHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTI 841
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEK 466
N+ + G +H F E +K
Sbjct: 842 ENIISGLSEAGKLSEVHTIFVELQQK 867
>gi|115466680|ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|55773690|dbj|BAD72273.1| putative PPR2 [Oryza sativa Japonica Group]
gi|113594979|dbj|BAF18853.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|215697063|dbj|BAG91057.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197679|gb|EEC80106.1| hypothetical protein OsI_21852 [Oryza sativa Indica Group]
gi|222635046|gb|EEE65178.1| hypothetical protein OsJ_20289 [Oryza sativa Japonica Group]
Length = 511
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 122/291 (41%), Gaps = 11/291 (3%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
++ +V++ M Q WYR + KL +GK ++ + ++F ++++G P+ ++
Sbjct: 141 DSALKVFDLMRDQVWYRPYVGIYVKLITMLGKCKQPERAHELFQAMVDEGCAPNLESYTA 200
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ AY + G D A S+ +M G +P ++ L ++ L Y ++ +
Sbjct: 201 LVSAYSRS---GRFDRAFSLLEQMKATPGCRPDVQTYSILIKSC------LHAYDFERVK 251
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
++ ++ +G+ Y+ LI + + +LL EM + + S LR
Sbjct: 252 YLMEDMARAGIRPNVVTYNTLIDAYGKAGRFAEMESTLL--EMLTENCKPDVWTMNSTLR 309
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
G +E E + + S + +++Y K + K + MQ+ S
Sbjct: 310 AFGGSGQIETMESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSW 369
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
++ Y+ +I+ +A + E E + + +KP + +L Y G
Sbjct: 370 TIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSLVRAYGRAG 420
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 129/299 (43%), Gaps = 15/299 (5%)
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQ 294
D A +++ M Y+P + ++ L++ G + ++A +F ++ G
Sbjct: 141 DSALKVFDLMRDQVWYRP----YVGIYVKLITMLGKCKQ--PERAHELFQAMVDEGCAPN 194
Query: 295 KDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKT 354
+ Y+ L+ +S D+ SLL++ G + +++ C D E +
Sbjct: 195 LESYTALVSAYSRSGRFDRA-FSLLEQMKATPGCRPDVQTYSILIKSCLHAYDFERVK-- 251
Query: 355 WLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+L + GI Y ++AY K G F + EM V + +
Sbjct: 252 YLMEDMARAGIRPNVVTYNTLIDAYGKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAF 311
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRT 472
+ + E ES ++F +G+ P + +Y L + Y M++++ A E ++K + T
Sbjct: 312 GGSGQIETMESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMG-AVMEYMQKYYYSWT 370
Query: 473 I--YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
I Y + +++ AG++E+ E IF M S++ I N + ++ AY +GD K + +
Sbjct: 371 IVTYNVVIDAFGRAGDLEQMEYIFRLMKSER-IKPNCVTLCSLVRAYGRAGDVKKIKTV 428
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 131/298 (43%), Gaps = 15/298 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ G VP TF+ LI AY G ++A ++Y RM+ G P S +N++
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRC---GSFEQAMTVYRRMLD-AGVTPDLSTYNTVL 531
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
AL GG+ +Q+E + + + + Y L LH+Y + + + L +
Sbjct: 532 AALAR--GGM----WEQSEKVLAEMEDGRCKPNELTYCSL--LHAYANGKEIGLMHSLAE 583
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
E+ E +L +++ VC+K + +AE+ + L E + Y +
Sbjct: 584 EVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQ 643
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
K+ + M+ER + S+ Y+ ++ + ++ + +E +++E + G+KP + SY
Sbjct: 644 MVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYN 703
Query: 442 NLTNMYL-NLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ Y N M D + FSE P+ Y ++ S E+A + +M
Sbjct: 704 TVIYAYCRNTRMRDASRI-FSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 87/436 (19%), Positives = 170/436 (38%), Gaps = 77/436 (17%)
Query: 150 LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQ 209
L C R ++ +V+E M + + +D L D GK + + + ++++
Sbjct: 285 LITCCKRGSLHQEAAQVFEEM-KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLN 343
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG-------------GYQPRPSL 256
G PS +T++ LI AY G LDEA + N+M + G G++ +
Sbjct: 344 GFSPSIVTYNSLISAYAR---DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 257 HNSL-----FRALVSKPG-----GLSKYYLQQAEF-----IFHNLLTSGLEIQKDIYSGL 301
+++ R KP K Y + +F IF + GL ++ L
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
+ + Q+ +D E +S + KEM++AGF +E +++
Sbjct: 461 LAVFG-QNGMDSE-VSGVFKEMKRAGFVPERETFNTLI---------------------- 496
Query: 362 DNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
AY++ G F +++ ++R M + + + Y+ ++ L + E +
Sbjct: 497 -------------SAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLN---LG-MHDRLHLAFSECLEKCRPNRTIYGIY 477
E ++ E + KP +Y +L + Y N +G MH +S +E P +
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE---PRAVLLKTL 600
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
+ + +AE F+ + ++ + + N ++S Y KA + D M +
Sbjct: 601 VLVCSKCDLLPEAERAFSELK-ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 538 YEIESAWMEKLDYVLS 553
+ A L Y+ S
Sbjct: 660 FTPSMATYNSLMYMHS 675
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 118/256 (46%), Gaps = 14/256 (5%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D + L + GK R+ K D+ ++ + G +P ++++L+ AY + G + EA
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKS---GSIKEAM 337
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
++++M Q G P + ++ L G S Y +F + +S + Y
Sbjct: 338 GVFHQM-QAAGCTPNANTYSVLLNLF-----GQSGRY-DDVRQLFLEMKSSNTDPDAATY 390
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+ LI + + KE ++L +M + E E ++ C K G EDA K L+
Sbjct: 391 NILIEVFG-EGGYFKEVVTLFH-DMVEENIEPDMETYEGIIFACGKGGLHEDARKI-LQY 447
Query: 359 LESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
+ +++ +P+ A+ +EA+ + + ++L F M E + S+ +H ++ +
Sbjct: 448 MTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGL 507
Query: 418 TELTESLMKEFVETGM 433
+ +E+++ V++G+
Sbjct: 508 VKESEAILSRLVDSGI 523
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/494 (18%), Positives = 182/494 (36%), Gaps = 73/494 (14%)
Query: 129 GTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLAD 188
G++ R L+ K L D + + + R++++M +Q W + + + T +
Sbjct: 90 GSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIS 149
Query: 189 YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY----------------------- 225
+G+E KC ++FD++ +QG S ++ LI AY
Sbjct: 150 LLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISP 209
Query: 226 --------LSAPVQGCLD-EACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYL 276
++A +G LD E ++ G QP +N+L A + G
Sbjct: 210 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLG------ 263
Query: 277 QQAEFIFHNLLTSGL------------------EIQK---------------DIYSGLIW 303
+AE +F + G+ ++K DI S +
Sbjct: 264 DEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVL 323
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
L +Y + + + +MQ AG +L + + G +D + +L + S+
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT 383
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
+ +E + + G F + + +F +M E + Y II K E
Sbjct: 384 DPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARK 443
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLK 482
+++ + P +Y + + +++ +AF+ E P+ + L S
Sbjct: 444 ILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFA 503
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIES 542
G ++++E I + + D I N + N + AY G F +A K Y M + + +
Sbjct: 504 RGGLVKESEAILSRL-VDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDE 562
Query: 543 AWMEKLDYVLSLNR 556
+E + V S R
Sbjct: 563 RTLEAVLSVYSFAR 576
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 147/349 (42%), Gaps = 28/349 (8%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE----ACSIY 241
L + + KE + + + + D+++ G P+ TF+ ++V + C E A ++
Sbjct: 300 LINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLV-------ESCRKEDVWEAERVF 352
Query: 242 NRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
N M+Q G S S + S+ G L + A F + GL IY+
Sbjct: 353 NEMLQRGVVPDLISF--SSIVGVFSRNGELGR-----ALAYFEKMKGVGLVPDTVIYT-- 403
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
I ++ Y N D ++ EM + G ++L + ++DA++ + ++E
Sbjct: 404 ILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVER 463
Query: 362 DNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
+ Y K G K+L +F M R V Y+ +++ CK E E
Sbjct: 464 GVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKA 523
Query: 422 ESLMKEFVETGMKPLMPSYIN---LTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIY 477
+ L + + + + PSYI+ L N + +LG+ + E EK +P
Sbjct: 524 KELWYDMIS---REIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTI 580
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
++ AGN+ KA + N M S + + + + N ++++++ +F +A
Sbjct: 581 IKGYLRAGNLSKANDFLNTMIS-EGVPPDCITYNTLINSFVKEENFDRA 628
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/371 (18%), Positives = 148/371 (39%), Gaps = 17/371 (4%)
Query: 165 RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
RV+ M+Q+ D + + + + + F+ + G VP + + ILI
Sbjct: 350 RVFNEMLQRGVVP-DLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILING 408
Query: 225 YL-SAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIF 283
Y + V G L + N M++ G + +N+L L L A+ +F
Sbjct: 409 YCRNDDVSGAL----KMRNEMVERGCVMDVVT-YNTLLNGLCRGK------MLDDADELF 457
Query: 284 HNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCA 343
++ G + D Y+ +H Y + + + L + M + +++
Sbjct: 458 KEMVERG--VFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFC 515
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP 403
K G++E A++ W ++ + +F + + +G ++ ++ EM+E+ ++
Sbjct: 516 KVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLV 575
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC 463
+ II+ +A + + G+ P +Y L N ++ DR +
Sbjct: 576 TCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNM 635
Query: 464 LEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
E+ PN Y L G +++AE + H D+ I + + +++ Y+S +
Sbjct: 636 EERGLLPNLVTYNAILGGFSRHGRMQEAEMVL-HKMIDKGINPDKSTYTSLINGYVSKDN 694
Query: 523 FVKAEKIYDLM 533
+A +++D M
Sbjct: 695 MKEAFRVHDEM 705
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 156/368 (42%), Gaps = 25/368 (6%)
Query: 165 RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
RV++ M ++H D + L + K K + RD+FD + +G+ P+ ++ I++
Sbjct: 310 RVFKEM-RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNG 368
Query: 225 YLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
Y + +GCL + +++ M+ G P N L +A + G+ L +A IF+
Sbjct: 369 YAT---KGCLVDMTDLFDLMLG-DGIAPDIYTFNVLIKAYAN--CGM----LDKAMIIFN 418
Query: 285 NLLTSGLE----IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ G++ + + + L + D ++K +M G K +++
Sbjct: 419 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK------FNQMIDQGVAPDKYAYHCLIQ 472
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-S 399
G + A++ ++ + + F + K+G M + IF ++ +G
Sbjct: 473 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF-DLTVNVGLH 531
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
+ Y +++ C + E + V G++P Y L N Y +G D
Sbjct: 532 PTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSL 591
Query: 460 FSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
F E L+K +P+ +Y I ++ L AG A+ F+ M ++ I +N + NI+L
Sbjct: 592 FREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM-TESGIAMNKCTYNIVLRGLF 650
Query: 519 SSGDFVKA 526
+ F +A
Sbjct: 651 KNRCFDEA 658
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 11/257 (4%)
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE--GKEVLLSVLR 340
F LL +GL + I + L+ D+ LL + + + +LL L
Sbjct: 134 FGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 193
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKSLEIFREMQERL 397
K G +D LR++ + +P A+ ++ + K G+ K+ ++F+EM +R
Sbjct: 194 DQGKSGQADD----LLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRG 249
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
Y ++ LCKA + E+ +++ V G+ P +Y NL Y + G
Sbjct: 250 IPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAV 309
Query: 458 LAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F E P+ + + SL G I++A ++F+ M + + N S I+L+
Sbjct: 310 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM-AMKGQNPNVFSYTIMLNG 368
Query: 517 YLSSGDFVKAEKIYDLM 533
Y + G V ++DLM
Sbjct: 369 YATKGCLVDMTDLFDLM 385
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 150/392 (38%), Gaps = 47/392 (11%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA-- 228
M Q DF + + + K R K ++N+G +P+ T++ LI Y S
Sbjct: 245 MVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQ 304
Query: 229 ---PVQ---------------------------GCLDEACSIYNRMIQLGGYQPRPSLHN 258
V+ G + EA +++ M + G P
Sbjct: 305 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM-AMKGQNP------ 357
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
++F + G +K L +F +L G I DIY+ + + +Y + ++ +
Sbjct: 358 NVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG--IAPDIYTFNVLIKAYANCGMLDKAMI 415
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEA 376
+ EM+ G + +V+ + G ++DA + + +++ D G+ + Y ++
Sbjct: 416 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI--DQGVAPDKYAYHCLIQG 473
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
+ G +K+ E+ E+ + + II LCK +++ V G+ P
Sbjct: 474 FCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPT 533
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
Y L + Y +G ++ F + PN +YG + G I++ +F
Sbjct: 534 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593
Query: 496 HMHSDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
M + I +T NII+ +G V A+
Sbjct: 594 EMLQ-KGIKPSTILYNIIIDGLFEAGRTVPAK 624
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 56/300 (18%), Positives = 120/300 (40%), Gaps = 46/300 (15%)
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G +++AC ++ M+Q G P ++S+ AL + +AE ++ G
Sbjct: 232 EGDVNKACDLFKEMVQ-RGIPPDFVTYSSVVHALCKARA------MDKAEAFLRQMVNKG 284
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ Y+ LI+ +S KE + + KEM++ L ++ K G +++
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQW-KEAVRVF-KEMRRHSILPDVVTLSMLMGSLCKYGKIKE 342
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
A + + ++ + YA G
Sbjct: 343 ARDVFDTMAMKGQNPNVFSYTIMLNGYATKG----------------------------- 373
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRP 469
C + T+L + ++ + G+ P + ++ L Y N GM D+ + F+E + +P
Sbjct: 374 --CLVDMTDLFDLMLGD----GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
+ Y + +L G ++ A E FN M DQ + + + + ++ + + G +KA+++
Sbjct: 428 DVVTYRTVIAALCRIGKMDDAMEKFNQM-IDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486
>gi|384251704|gb|EIE25181.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 905
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 104/238 (43%), Gaps = 6/238 (2%)
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
Y+ +I + YQ ++D R L KEM+ E +++ VC K G+ A T+
Sbjct: 213 YTAMISMCIYQQDVD--RAMDLAKEMRVRNIERNVHTYTALMNVCIKCGNCPLALDTY-N 269
Query: 358 LLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
+ D P + ++ Y K+G + + +++ M+ + Y+ +I
Sbjct: 270 HMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCG 329
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYG 475
+ ++ K ++ G P +Y L + Y G D++ F E + K C + Y
Sbjct: 330 QPREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYS 389
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ + + AG E A E+FN M + I NT + N +++A + KA ++++ M
Sbjct: 390 SLISACEKAGQWELALELFNEMAGEGCI-PNTVTYNSLITACAQGAQWEKASEVFEQM 446
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 77/217 (35%), Gaps = 39/217 (17%)
Query: 323 MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKI 380
M+ G E +++ C G +A + R+L D G A Y + AY K
Sbjct: 306 MKTEGVEPVLRTYNTLIIACNMCGQPREAMAVYKRML--DEGYSPNATTYNALISAYGKA 363
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G+ K +E+F+EM + SV Y +I KA + EL L E G
Sbjct: 364 GQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELALELFNEMAGEG-------- 415
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
C PN Y + + EKA E+F M
Sbjct: 416 --------------------------CIPNTVTYNSLITACAQGAQWEKASEVFEQMQKG 449
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
+ + ++S+Y G + +A Y+ M L++
Sbjct: 450 GCT-PDVVTFTALISSYEKGGQWRRALGAYEQMRLQR 485
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 14/228 (6%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D GK + + + + +G P T++ LI+A + G EA ++Y RM+
Sbjct: 286 LIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIA---CNMCGQPREAMAVYKRML 342
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
GY P + +N+L A K G L K +F ++ G E YS LI
Sbjct: 343 D-EGYSPNATTYNALISAY-GKAGQLDKVM-----EVFQEMVHKGCERSVITYSSLI--- 392
Query: 306 SYQDNIDKERISL-LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
S + + ++L L EM G S++ CA+ E A + + ++ +
Sbjct: 393 SACEKAGQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGGCT 452
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
F + +Y K G++ ++L + +M+ + ++ II+ L
Sbjct: 453 PDVVTFTALISSYEKGGQWRRALGAYEQMRLQRCKPDAIVFNAIIDTL 500
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 138/352 (39%), Gaps = 54/352 (15%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL---- 247
K ++ + DIF +++ G P+ +T+ L+ A G +AC +Y +MI
Sbjct: 537 KTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKA---GESQKACEVYAKMIGTSDNV 593
Query: 248 -------GGYQPRPSLHNSLFRALVSKPGGLSKYY-LQQAEFIFHNLLTSGLEIQKDIYS 299
G + + + + AL+ GL K + + A+ + + ++G E IY
Sbjct: 594 GSDFYFEGEHTDSIAPNVVTYGALID---GLCKAHKVVDAQELLDVMSSNGCEPNHIIYD 650
Query: 300 GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
LI +D + + M + G+ S++ K+ ++ A K ++L
Sbjct: 651 ALIDGFCKVGKLDNAQEVFFR--MSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQML 708
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
ES + ++ +IGE K+L++ M++R + +V Y +I+ L K+ + +
Sbjct: 709 ESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVD 768
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRT------- 472
++ L + + G P +Y L N G+ D H SE + P
Sbjct: 769 MSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVV 828
Query: 473 ---------------------------IYGIYLESLKNAGNIEKAEEIFNHM 497
+YG+ ++S AG +EKA E+ M
Sbjct: 829 QGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEM 880
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 130/312 (41%), Gaps = 27/312 (8%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSL-FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLE 292
DEA S +RM + + N + +R L++ G L K L + I ++ G
Sbjct: 290 FDEAISFLHRM------RCNSCIPNVVTYRTLLA--GFLKKKQLGWCKRIISMMMNEGCN 341
Query: 293 IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL-LSVLRVCAKE-----G 346
+++ L+ HSY + D L M G G V + + +C+ E
Sbjct: 342 PNPSLFNSLV--HSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPD 399
Query: 347 DVEDAEKTWLRLLESD---NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP 403
+ AEK + +L S N + T F +G+F K+ +I + M +
Sbjct: 400 LLALAEKVYEEMLASSCVLNKVNTANFA---RCLCGMGKFDKAFQIIKLMMRKGFVPDTS 456
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC 463
Y K+I LC+A + E L +E G+ P + +Y L + + +G+ ++ F E
Sbjct: 457 TYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDE- 515
Query: 464 LEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
+E C P+ Y L + + +A +IF+ M D NT + + ++ +G
Sbjct: 516 MESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRM-VDAGCAPNTITYSALVDGLCKAG 574
Query: 522 DFVKAEKIYDLM 533
+ KA ++Y M
Sbjct: 575 ESQKACEVYAKM 586
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 123/296 (41%), Gaps = 38/296 (12%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYN- 242
T L D M K+R+ + ++ P+ +T+ +I D C I
Sbjct: 685 TSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMI------------DGLCRIGEC 732
Query: 243 -------RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQK 295
M++ G P + SL L G LQ +F ++T G
Sbjct: 733 QKALKLLSMMEKRGCNPNVVTYTSLIDGL--GKSGKVDMSLQ----LFTQMITQGCAPNY 786
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
Y LI H + E SLL EM+Q + + + SV++ +K+ A
Sbjct: 787 VTYRVLIN-HCCAAGLLDEAHSLLS-EMKQTYWPKYVQGYCSVVQGFSKK---FIASLGL 841
Query: 356 LRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPA---YHKIIE 410
L LES +G+ + A VY + ++++K G K+LE+ +EM E S ++ + Y +I+
Sbjct: 842 LEELES-HGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQ 900
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM-HDRLHLAFSECLE 465
LC A + E L E G+ P + ++I L + + ++ L L +S C E
Sbjct: 901 ALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDE 956
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 146/352 (41%), Gaps = 24/352 (6%)
Query: 180 FALATKLADYMGKERKFAK------CRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGC 233
F + K G KFAK + F D+I G P+ T++I+I +G
Sbjct: 92 FRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWK---EGD 148
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
++ A ++ M + G P +NS+ + G + + L + F + + E
Sbjct: 149 IEAARGLFEEM-KFRGLIPDTVTYNSM----IDGYGKVGR--LDDTVYFFEEMKSMSCEP 201
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
Y+ LI + K +EM+Q+G + +++ KE ++ A K
Sbjct: 202 DVITYNSLINCFCKSGKLPKGL--EFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIK 259
Query: 354 TWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
++ + + +P F Y ++A KIG + + EM E +V Y +I+
Sbjct: 260 FYVDMRRVGH-VPN-EFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDG 317
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPN 470
LC AE + E L + V G+ P + SY L + ++ DR +E + +P+
Sbjct: 318 LCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPD 377
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
+YG ++ L IE A+ + N M + I NT ++ AY SG+
Sbjct: 378 LLLYGTFIWGLCGLEKIEAAKVVMNEMQ-ENGIKANTLIYTTLMDAYFKSGN 428
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 22/249 (8%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+Q + + + L D KE + + D+ G VP+E T+ L+ A
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKI-- 286
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G L +A + N M+++G + + AL+ G +++AE +F ++T+G
Sbjct: 287 -GNLSDAFRLANEMLEVG-----VEWNVVTYTALID--GLCDAERMKEAEKLFGKMVTAG 338
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS---VLRVCAKEGD 347
+ Y+ LI H + + +R L E++ G + ++LL + +C E
Sbjct: 339 VIPNLASYNALI--HGFVKAKNMDRALELLNELKGRGIQ--PDLLLYGTFIWGLCGLE-K 393
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
+E A+ + E NGI +Y M+AY K G + L + EMQE +V +
Sbjct: 394 IEAAKVVMNEMQE--NGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTF 451
Query: 406 HKIIELLCK 414
+I+ LCK
Sbjct: 452 CVLIDGLCK 460
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 20/200 (10%)
Query: 344 KEGDVEDA----EKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
KEGD+E A E+ R L D T + ++ Y K+G ++ F EM+
Sbjct: 145 KEGDIEAARGLFEEMKFRGLIPD----TVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCE 200
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
V Y+ +I CK+ + +E ++G+KP + SY L + + D + A
Sbjct: 201 PDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCK---EDMMQQA 257
Query: 460 FSECLEKCR----PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV--NTRSCNII 513
++ R PN Y +++ GN+ A + N M +GV N + +
Sbjct: 258 IKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEM---LEVGVEWNVVTYTAL 314
Query: 514 LSAYLSSGDFVKAEKIYDLM 533
+ + +AEK++ M
Sbjct: 315 IDGLCDAERMKEAEKLFGKM 334
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 154/361 (42%), Gaps = 16/361 (4%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D T L D GK + K ++ ++ + G VP ++++L+ AY G +++A
Sbjct: 283 DITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARI---GNIEDAT 339
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
++ R++Q G P + S+ L K G +Y + +F + S E Y
Sbjct: 340 GVF-RLMQEAGCVPNAETY-SILLGLYGKHG---RY--DEVRELFLEMKVSNTEPDAATY 392
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+ LI + + KE ++L +M + E E ++ C K G +DA+K L +
Sbjct: 393 NTLIDVFG-EGGYFKEVVTLFH-DMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHM 450
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
E + A+ +EAY + + ++L M E ++ Y+ +I + +
Sbjct: 451 SEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLY 510
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGI 476
+ TE+++ + + G+ S+ + + G + A+ E +EK R P+
Sbjct: 511 KETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVE-MEKSRLVPDERTLEA 569
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
L AG ++++ E F + + + N ++L+ Y S + +A ++ D M
Sbjct: 570 VLSVYCIAGLVDESVEQFQEIKASGIL-PNVMCYCMMLAVYAKSDRWNEAYELLDEMLTN 628
Query: 537 K 537
+
Sbjct: 629 R 629
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 68/370 (18%), Positives = 135/370 (36%), Gaps = 47/370 (12%)
Query: 129 GTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLAD 188
G++ R L+ K L D + + + + R+++ M +Q W + + + T +
Sbjct: 92 GSIARCLDVFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMIS 151
Query: 189 YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG 248
+G+E KC DIF+++ G S ++ LI +Y G + + + RM
Sbjct: 152 LLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSY---GRNGKYEVSLELLERM---- 204
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
+ E + ++LT I GL W
Sbjct: 205 -----------------------------KKERVSPSILTYNTVINSCARGGLDW----- 230
Query: 309 DNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
E + L EM+ G + ++L C+ G ++AE + + E
Sbjct: 231 -----EGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDIT 285
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
+ Y ++ + K+ K E+ +EM + +Y+ ++E + E + +
Sbjct: 286 TYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLM 345
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNI 487
E G P +Y L +Y G +D + F E + P+ Y ++ G
Sbjct: 346 QEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYF 405
Query: 488 EKAEEIFNHM 497
++ +F+ M
Sbjct: 406 KEVVTLFHDM 415
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 136/327 (41%), Gaps = 18/327 (5%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ + D + L + + K+ + ++I + +P +TF LI ++
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK--- 327
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G L EA +YN MI G P +NSL G + L +A +F +++ G
Sbjct: 328 EGKLLEAKELYNEMITRG-IAPDTITYNSLI------DGFCKENCLHEANQMFDLMVSKG 380
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
E DI + I ++SY + L +E+ G +++ + G +
Sbjct: 381 CE--PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 351 AEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
A++ + ++ G+P Y ++ GE K+LEIF +MQ+ + + Y+ I
Sbjct: 439 AKELFQEMVS--RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-C 467
I +C A + + SL + G+KP + +Y + G + F + E C
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 468 RPNRTIYGIYLES-LKNAGNIEKAEEI 493
P+ Y I + + L +G I E I
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELI 583
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
K G +L++FR+M+ER ASV Y +I+ LCK + SL E G+K +
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+Y +L N G D E + + P+ + ++ G + +A+E++N
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
M + + I +T + N ++ + +A +++DLM K E
Sbjct: 341 MIT-RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Score = 39.7 bits (91), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 65/360 (18%), Positives = 135/360 (37%), Gaps = 84/360 (23%)
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG 269
G P +TF L+ + ++G + EA ++ +RM+++ + RP L
Sbjct: 135 GYEPDTITFSTLVNGFC---LEGRVSEAVALVDRMVEM---KQRPDL------------- 175
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
+ + L +GL ++ + L+ ID+ M + GF+
Sbjct: 176 ------------VTVSTLINGLCLKGRVSEALVL-------IDR---------MVEYGFQ 207
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEI 389
+ VL K G+ A + ++ E + + +++ K G F +L +
Sbjct: 208 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
F EM+ + A V Y +I LC + + +++E + + P + ++ L ++++
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 450 LG----------------------MHDRLHLAFSE--CLEK------------CRPNRTI 473
G ++ L F + CL + C P+
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
Y I + S A ++ +F + S I NT + N ++ + SG A++++ M
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIP-NTITYNTLVLGFCQSGKLNAAKELFQEM 446
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 136/327 (41%), Gaps = 18/327 (5%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ + D + L + + K+ + ++I + +P +TF LI ++
Sbjct: 300 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK--- 356
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G L EA +YN MI G P +NSL G + L +A +F +++ G
Sbjct: 357 EGKLLEAKELYNEMITRG-IAPDTITYNSLI------DGFCKENCLHEANQMFDLMVSKG 409
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
E DI + I ++SY + L +E+ G +++ + G +
Sbjct: 410 CE--PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 467
Query: 351 AEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
A++ + ++ G+P Y ++ GE K+LEIF +MQ+ + + Y+ I
Sbjct: 468 AKELFQEMVS--RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 525
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-C 467
I +C A + + SL + G+KP + +Y + G + F + E C
Sbjct: 526 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 585
Query: 468 RPNRTIYGIYLES-LKNAGNIEKAEEI 493
P+ Y I + + L +G I E I
Sbjct: 586 TPDDFTYNILIRAHLGGSGLISSVELI 612
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
K G +L++FR+M+ER ASV Y +I+ LCK + SL E G+K +
Sbjct: 250 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 309
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+Y +L N G D E + + P+ + ++ G + +A+E++N
Sbjct: 310 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 369
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
M + + I +T + N ++ + +A +++DLM K E
Sbjct: 370 MIT-RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 411
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 65/360 (18%), Positives = 135/360 (37%), Gaps = 84/360 (23%)
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG 269
G P +TF L+ + ++G + EA ++ +RM+++ + RP L
Sbjct: 164 GYEPDTITFSTLVNGFC---LEGRVSEAVALVDRMVEM---KQRPDL------------- 204
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
+ + L +GL ++ + L+ ID+ M + GF+
Sbjct: 205 ------------VTVSTLINGLCLKGRVSEALVL-------IDR---------MVEYGFQ 236
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEI 389
+ VL K G+ A + ++ E + + +++ K G F +L +
Sbjct: 237 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 296
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
F EM+ + A V Y +I LC + + +++E + + P + ++ L ++++
Sbjct: 297 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 356
Query: 450 LG----------------------MHDRLHLAFSE--CLEK------------CRPNRTI 473
G ++ L F + CL + C P+
Sbjct: 357 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 416
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
Y I + S A ++ +F + S I NT + N ++ + SG A++++ M
Sbjct: 417 YSILINSYCKAKRVDDGMRLFREISSKGLIP-NTITYNTLVLGFCQSGKLNAAKELFQEM 475
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 100/232 (43%), Gaps = 2/232 (0%)
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
D+ + I +H Y + E L EM G E SV+ + EG V DA +
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343
Query: 356 LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
++ + F M + + G+ + F EMQ+R +A Y +I LC+A
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIY 474
E + E +++E + G+ +Y L + Y +G L ++ ++K PN Y
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
+ L G++ A E+ + M S + + +N + N +++ +G+ +A
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCS-KGLELNIFTYNSLINGLCKAGNLEQA 514
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 117/285 (41%), Gaps = 8/285 (2%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
L++AE + + GL++ Y+ LI Y L+ +M Q
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLI--DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM 393
++ K+GDV A + + G+ F Y + K G +++ +M
Sbjct: 464 TALSDGLCKQGDVCAANELLHEM--CSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
E V Y II LC+++E + SL++E ++ G+KP + +Y L N + G
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581
Query: 454 DRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI 512
+ LEK PN T Y ++ N++ EI+ M S + + N + NI
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVP-NENTYNI 640
Query: 513 ILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRK 557
++ + + + +A + M K + + ++ L +L+ +K
Sbjct: 641 LIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
CM R E G R+ EWM++++ + + + Y E+ +I+ +++Q VP
Sbjct: 576 CMSGRV-EGGKRLLEWMLEKNIHPNTTTYNSLMKQYC-IEKNMKSTTEIYKGMLSQEVVP 633
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK 273
+E T++ILI + A + EA ++ MI+ G++ S +N+L R L++K K
Sbjct: 634 NENTYNILIKGHCKA---RNMKEALYFHSEMIE-KGFRLTASSYNALIR-LLNK-----K 683
Query: 274 YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+A +F + L + D+Y+ I L +DN++
Sbjct: 684 KKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLE 722
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 112/250 (44%), Gaps = 20/250 (8%)
Query: 183 ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYN 242
L D + K+R+F + +F + N+G P+E+T+ ILI + +G +D+A +++
Sbjct: 338 CNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCK---RGMMDDALCMFD 394
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
RM + G + +NSL QA + + ++ GL YS LI
Sbjct: 395 RMRE-KGIRVTVYPYNSLINGYCQHDN------FHQARGLLNEMVEKGLAPSAASYSPLI 447
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+ D L +EM + G +++ K+G++++A + + ++++S
Sbjct: 448 AGLCRKG--DLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSS 505
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
F +E Y ++G K+ +++ +M +R + Y +I +LC LT
Sbjct: 506 VVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLC------LTL 559
Query: 423 SLM--KEFVE 430
M KEFV+
Sbjct: 560 GAMKAKEFVD 569
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 76/182 (41%), Gaps = 5/182 (2%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEA 376
L + M G E + ++ K G ++DA + R+ E GI + Y +
Sbjct: 357 LFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREK--GIRVTVYPYNSLING 414
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
Y + F ++ + EM E+ + S +Y +I LC+ + L +E G+
Sbjct: 415 YCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGN 474
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
+ ++ L + + G D F + ++ PN + + +E GN+ KA ++++
Sbjct: 475 VYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYD 534
Query: 496 HM 497
M
Sbjct: 535 QM 536
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 147/378 (38%), Gaps = 70/378 (18%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L K+ + +FD +I+ VP+E+TF+++I Y G + +A +Y++
Sbjct: 479 TTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRV---GNVRKAFQLYDQ 535
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGL-SKYYLQQAE-----------------FIFHN 285
M+ G P + SL L G + +K ++ E F
Sbjct: 536 MVD-RGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEG 594
Query: 286 LLTSGLEI---------QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
LT I + D+ S + +++ D E+IS+L +EM++ G +
Sbjct: 595 RLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHT 654
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPT----------------------------- 367
++ V +KE ++ A W +++ +D P
Sbjct: 655 CMIDVHSKEENIVQALNCWDKMI-ADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLV 713
Query: 368 -----PAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
+F Y ++ A GE K+ + + E + +V ++ +I+ CKA + +
Sbjct: 714 GRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTV-TFNTLIKGFCKAGQIQG 772
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLE 479
LM+ E+G P SY + N +G ++ ++E L K +P+ Y I +
Sbjct: 773 AIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIR 832
Query: 480 SLKNAGNIEKAEEIFNHM 497
G +K I++ M
Sbjct: 833 WCNIHGEFDKGLGIYSDM 850
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 138/350 (39%), Gaps = 28/350 (8%)
Query: 192 KERKFAKCRDIFDDIINQGRVP-SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
K R+FA RD+FD+++ Q + P E + I AY LD A + RM + G
Sbjct: 172 KIRQFALARDLFDEMV-QCKFPLDEYVYTAGIRAYCEIRN---LDGARGLLTRM-ESKGV 226
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
+ +N L L + L+ E + ++++ G+ + Y L++ +
Sbjct: 227 KGSAVPYNVLMYGLCR-----NNRVLEAVE-VKNSMVERGIVADEVTYRTLVYGFCRTEE 280
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE---SDNGIPT 367
+ E + +M F ++ K G ++ A + L E N
Sbjct: 281 L--EMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFAC 338
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
A + K+ K F ++ +FR M R + Y +I LCK + +
Sbjct: 339 NALIDKL---CKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDR 395
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECLEK-CRPNRTIYGIYLESLKN 483
E G++ + Y +L N Y HD H A +E +EK P+ Y + L
Sbjct: 396 MREKGIRVTVYPYNSLINGYCQ---HDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCR 452
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G++ A E+ M + G N + ++S + G+ +A +++D M
Sbjct: 453 KGDLASAMELHREMARNGVSG-NVYTFTTLISGFCKDGNMDEAARLFDKM 501
>gi|10178273|emb|CAC08331.1| putative protein [Arabidopsis thaliana]
Length = 1280
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 127/313 (40%), Gaps = 23/313 (7%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
+ + W +Q YR D +A + + R+ A + + D++N S F I
Sbjct: 89 AYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFI 148
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
+A G +DEA S+++R+ ++G P +N L A +SK S ++ E
Sbjct: 149 RCLGNA---GLVDEASSVFDRVREMGLCVPNAYTYNCLLEA-ISKSNSSS---VELVEAR 201
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
+ G K + + L Y + ER + E+ G+ + + V+ C
Sbjct: 202 LKEMRDCGFHFDKFTLTPV--LQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFC 259
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
K G V+ A + L E D + + + + K K+ ++F +M+ +A +
Sbjct: 260 -KWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADI 318
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
Y +I LCK ++ E+ SL E +G+ P + G+ +L +FSE
Sbjct: 319 ALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPP-------------DRGILGKLLCSFSE 365
Query: 463 CLEKCRPNRTIYG 475
E R I G
Sbjct: 366 ESELSRITEVIIG 378
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 113/260 (43%), Gaps = 36/260 (13%)
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
N+ +P + I+I + A +D A ++ + ++Q G P P ++N++ + +
Sbjct: 432 NKAILPDSDSLSIVINCLVKANK---VDMAVTLLHDIVQ-NGLIPGPMMYNNIIEGMCKE 487
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQK----DIYSGLIWLHSYQDNIDKERISLLKKEM 323
G S+ L+ + + +G+E + IY L + +D L K+M
Sbjct: 488 --GRSEESLK----LLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALD------LLKKM 535
Query: 324 QQAGFEEG-KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEA-YAKIG 381
+ GFE K V ++C + G DA K + + F+ M A A I
Sbjct: 536 RFYGFEPWIKHTTFLVKKLC-ENGRAVDACKYL-------DDVAGEGFLGHMVASTAAID 587
Query: 382 EFMKS------LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+K+ LE+FR++ V AYH +I+ LCKA T + L E V G+KP
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP 647
Query: 436 LMPSYINLTNMYLNLGMHDR 455
+ +Y ++ + + G DR
Sbjct: 648 TVATYNSMIDGWCKEGEIDR 667
>gi|255583688|ref|XP_002532598.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527686|gb|EEF29795.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 553
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 150/370 (40%), Gaps = 28/370 (7%)
Query: 165 RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
++ EW+ Q W+ F+ + L GK+ F+ + + G VP+ ++ L+ A
Sbjct: 125 QILEWVRTQSWWDFNEMDSLMLITAYGKQGNFSAAEKVLSYMNKMGYVPNVVSHTALMEA 184
Query: 225 YLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
Y + A +I+ RM Q G +P + + + V ++AE +F
Sbjct: 185 YGRG---ARYNNAEAIFRRM-QSSGPKPSAVTYQIILKNFVEGNK------FKEAEEVFE 234
Query: 285 NLL---TSGLEIQKDIYSGLIWLHSYQDNIDKER-ISLLKKEMQQAGFEEGKEVLLSVLR 340
LL S L+ + ++ +I++H N +K R I L M Q G + S++
Sbjct: 235 TLLDEEKSPLKPDQKMFHMMIYMHRKAGNYEKARQIFAL---MTQRGVPKSTVTYNSLMS 291
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
E + ++ K + ++ S ++ + AY K ++L +F EM +
Sbjct: 292 F---ETNYKEVSKIYDQMQRSGLQPDVISYALLINAYGKARREDEALAVFEEMLDAGVRP 348
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN----LGMHDRL 456
+ AY+ +++ + E ++ K P + SY + + Y+N G +
Sbjct: 349 THKAYNILLDAFAISGMVEQARTVFKSMRRDRYTPDLCSYTTMLSAYVNASDMAGAENFF 408
Query: 457 HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
+ + LE PN YG ++ N++K E + M + + N I+ A
Sbjct: 409 NRLKQDGLE---PNVVTYGALIKGYAKTNNLDKMMEKYEEMQL-RGVKANQTIFTTIMDA 464
Query: 517 YLSSGDFVKA 526
Y + DF A
Sbjct: 465 YGKNKDFGSA 474
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 127/315 (40%), Gaps = 51/315 (16%)
Query: 134 ILNAQKKW-LRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
+ NA KW LR ++ L +R+ + + GFR+ + M + D + L + +
Sbjct: 147 VFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL-KSAMHASGVQPDVYTYSVLINGL 205
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
KE K ++FD+++++G VP+ +TF LI + + G +D A IY +M
Sbjct: 206 CKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKS---GRVDLAMEIYKQM------ 256
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
L SL + I +N L GL + D L D
Sbjct: 257 -----LSQSL-----------------SPDLITYNTLIYGLCKKGD-------LKQAHDL 287
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
ID EM G + K +++ C KEGD+E A + R+++ + + A+
Sbjct: 288 ID---------EMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAY 338
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
+ + G ++ + ++ REM Y II CK + L+KE
Sbjct: 339 TALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQR 398
Query: 431 TGMKPLMPSYINLTN 445
G P + +Y L N
Sbjct: 399 DGHVPSVVTYNVLMN 413
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 379 KIGEFMKSLEIFR-------EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
K+ E M L+ F+ E+ E AS+ ++ ++ CK + + +S+ +
Sbjct: 95 KVLEHMMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKW 154
Query: 432 GMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKA 490
G++P + S+ L N Y+ LG + + L + +P+ Y + + L ++ A
Sbjct: 155 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 214
Query: 491 EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
E+F+ M D+ + N + ++ + SG A +IY M
Sbjct: 215 NELFDEM-LDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQM 256
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 157/393 (39%), Gaps = 24/393 (6%)
Query: 153 HCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRV 212
HC +I E ++Y+ M+ H ++ +T L + K R+ +F ++ G
Sbjct: 396 HC-QIGNVEEALKLYKEMIS-HGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLR 453
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P +T+ LI QG + +A +Y +M P +H ++ L K G +S
Sbjct: 454 PDLITYSTLIHGLCK---QGEVQQAILLYEKMCS-NRIIPNSLIHGAILMGLCEK-GKIS 508
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
QA F L+TS L + +Y+ I + Y + L K++ + G
Sbjct: 509 -----QARMYFDYLITSNLSLDIILYN--IMIDGYIKRGNTREAVKLYKQLGEKGISPTI 561
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESD--NGIPTPAFVYK--MEAYAKIGEFMKSLE 388
S++ + A RLL++ +G+ A Y M Y + G LE
Sbjct: 562 VTFNSLMYGFCINRKLSQAR----RLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLE 617
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+ EM+ + + Y +I+ LCK + + + L+++ G+ P SY + +
Sbjct: 618 LLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFC 677
Query: 449 NL-GMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
M L L P Y I + G+++ A+ + + ++ + +N
Sbjct: 678 KARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQ-NRKVNLNK 736
Query: 508 RSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEI 540
+ I+ A+ + GD KA + M K +E+
Sbjct: 737 YAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEV 769
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 5/196 (2%)
Query: 366 PTPAFV---YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
P P V + + +IG ++L++++EM S+ + ++ LCK+ + ++
Sbjct: 382 PNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAF 441
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE-CLEKCRPNRTIYGIYLESL 481
L E G++P + +Y L + G + L + + C + PN I+G L L
Sbjct: 442 KLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGL 501
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIE 541
G I +A F+++ + + ++ NI++ Y+ G+ +A K+Y + K
Sbjct: 502 CEKGKISQARMYFDYLIT-SNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPT 560
Query: 542 SAWMEKLDYVLSLNRK 557
L Y +NRK
Sbjct: 561 IVTFNSLMYGFCINRK 576
>gi|359482557|ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
[Vitis vinifera]
Length = 990
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 162/377 (42%), Gaps = 26/377 (6%)
Query: 128 GGTLVRILNAQKKW-LRQEDGTYLAVHCMRIRENET--GFRVYEWMMQQHWYRFDFALAT 184
G + R + KKW L+ TY + +R N + F VY +++ Y+ D
Sbjct: 23 GADVERCFDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYV-ELRRRGYKLDIFAYN 81
Query: 185 KLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM 244
L D + K+ K + +F D+ + P E T+ I+I ++ + G DE+ +++ M
Sbjct: 82 MLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMI--RMTGKI-GKADESLTLFQEM 138
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
+ GY P +N++ +AL + + + F+F ++ + +S ++ +
Sbjct: 139 TE-KGYTPNLIAYNTMIQALA------NNRMVDKTIFLFSKMVENNCRPNGFTFSVILNV 191
Query: 305 HSYQDNIDK--ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+ + + E + + K M K + ++R +K G +A + + +
Sbjct: 192 LVAEGQLGRLDEVVEVSNKFMN-------KSIYAYLVRTLSKLGHASEAHRLFCNMWSFH 244
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+ A++ +E+ G+ ++L++ ++ E+ S Y+ ++ L K ++T
Sbjct: 245 DEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLH 304
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLES 480
L ++ + G P + SY L + + G + F E LE C+P+ + +
Sbjct: 305 DLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEE-LENSSCKPDIISFNSLINC 363
Query: 481 LKNAGNIEKAEEIFNHM 497
L G+I++A F M
Sbjct: 364 LGKNGDIDEAHMRFKEM 380
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
KIG+ +SL +F+EM E+ + ++ AY+ +I+ L + T L + VE +P
Sbjct: 123 GKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNG 182
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEKCRP--NRTIYGIYLESLKNAGNIEKAEEIFN 495
++ + N+ + G RL E +E N++IY + +L G+ +A +F
Sbjct: 183 FTFSVILNVLVAEGQLGRL----DEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFC 238
Query: 496 HMHS 499
+M S
Sbjct: 239 NMWS 242
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 111/261 (42%), Gaps = 12/261 (4%)
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
Q+A +F +++ +G + +++ + L+S + + + + K+M + G E V
Sbjct: 147 QEAIQVFEHMMVNGF--RPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYN 204
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQ 394
++ C K GDVE A+ L +ES P F Y + Y K G ++L + M+
Sbjct: 205 VLIHACCKSGDVEKADNL-LSEMESKCVFP-DLFTYNTLISLYCKKGMHYEALSVQDRME 262
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
+ Y+ +I CK L KE + P +Y L + Y L D
Sbjct: 263 REGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDA--TPNHVTYTTLIDGYCRLNDLD 320
Query: 455 RLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI 512
+ L E +E P Y L L G I A ++ N M S++ I + +CN
Sbjct: 321 QA-LRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEM-SEKKIEPDNVTCNT 378
Query: 513 ILSAYLSSGDFVKAEKIYDLM 533
+++AY GD A K+ + M
Sbjct: 379 LINAYCKIGDMKSALKVKNRM 399
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 130/313 (41%), Gaps = 25/313 (7%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
K ++ ++ ++ P T++ LI Y +G EA S+ +RM + G +P +
Sbjct: 218 KADNLLSEMESKCVFPDLFTYNTLISLYCK---KGMHYEALSVQDRM-EREGIKPDIVTY 273
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
NSL K G + ++A +F + + Y+ LI + +++D+
Sbjct: 274 NSLIHGFC-KEGRM-----REAMRLFKEIRDA--TPNHVTYTTLIDGYCRLNDLDQAL-- 323
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL----LESDNGIPTPAFVYK 373
L++EM+ G S+LR + G + DA K + +E DN
Sbjct: 324 RLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTL---- 379
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ AY KIG+ +L++ M E Y +I CK E + + L+ ++ G
Sbjct: 380 INAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGF 439
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAE 491
P +Y L + Y N + + E + K C ++++Y + ++ A+
Sbjct: 440 SPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLC-VDKSLYRALIRRFCKREQVDYAK 498
Query: 492 EIFNHMHSDQTIG 504
+IF+ M T+G
Sbjct: 499 KIFSLMQEKGTLG 511
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 117/257 (45%), Gaps = 14/257 (5%)
Query: 187 ADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQ 246
A +M + A+C + +I +G P +T++ILI Y +A +++ M+
Sbjct: 370 ALFMEQRTDEAEC--MIKEIQEKGISPDAITYNILINGYCRC---ANAKKAFLLHDEMLA 424
Query: 247 LGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHS 306
G +P + SL L K +++A+ +F + + G+ +++ LI H
Sbjct: 425 -SGIKPTKKTYTSLLHVLSKK------NRMKEADDLFKKITSEGVLPDVIMFNALIDGHC 477
Query: 307 YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
N+ K LLK +M + + ++++ +EG VE+A + + +
Sbjct: 478 SNSNV-KGAFELLK-DMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535
Query: 367 TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
+F + Y++ G+ + + EM + + +V Y+ +++ LCK +E +L E L+K
Sbjct: 536 HISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLK 595
Query: 427 EFVETGMKPLMPSYINL 443
E V GM P +Y L
Sbjct: 596 EMVSKGMTPDDTTYFTL 612
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 152/386 (39%), Gaps = 27/386 (6%)
Query: 155 MRIRENETGFRVYEWM----MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQG 210
+++ E + +Y M ++ Y F+ + + + KE K K +D + G
Sbjct: 197 LKLNRTEAAWVLYAEMFRLRIKSSVYTFNI-----MINVLCKEGKLKKAKDFVGHMETSG 251
Query: 211 RVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGG 270
P+ +T++ ++ Y S+ G ++ A +I M + +P + SL G
Sbjct: 252 VKPNIVTYNTIVHGYCSS---GRVEAADAILTTM-KRQKIEPDSFTYGSLIS------GM 301
Query: 271 LSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE 330
+ L++A IF ++ GL IY+ LI + N+D S K EM + G
Sbjct: 302 CKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA--SAYKDEMLKKGISP 359
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLE 388
S++ E ++AE + E GI A Y + Y + K+
Sbjct: 360 TMSTYNSLIHALFMEQRTDEAECMIKEIQE--KGISPDAITYNILINGYCRCANAKKAFL 417
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+ EM + Y ++ +L K + + L K+ G+ P + + L + +
Sbjct: 418 LHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHC 477
Query: 449 -NLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
N + L K P+ + ++ G +E+A E+F+ M + I +
Sbjct: 478 SNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKR-RGIKPDH 536
Query: 508 RSCNIILSAYLSSGDFVKAEKIYDLM 533
S N ++S Y GD A ++ + M
Sbjct: 537 ISFNTLISGYSRRGDIKDAFRVRNEM 562
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 161/415 (38%), Gaps = 54/415 (13%)
Query: 122 ELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFA 181
+LP G++ R ++ + L +D + + + R++++M +Q W +
Sbjct: 26 QLPPR--GSVTRCMDLYRSKLTMQDFSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEH 83
Query: 182 LATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIY 241
+ T + MG+E KC +IF+D+ + F LI AY
Sbjct: 84 IYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAY---------------- 127
Query: 242 NRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
+ G Y+ SLH L++ +Q E NL+T + GL
Sbjct: 128 ---GRNGQYE--ASLHL------------LARMKKEQVE---PNLITYNTVLNACSKGGL 167
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
W E + L +M+ G + ++L C+ G VE A + + ES
Sbjct: 168 DW----------EGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNES 217
Query: 362 DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
G+ A YK ++ +A + + E+ REM++ + Y+ +IE A
Sbjct: 218 --GVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVH 275
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYL 478
+ K+ G P + +Y L +Y N G +++ FS+ + P Y +
Sbjct: 276 GAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLI 335
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ G +++ +F+ M D + + + + +LS G +A KI+ M
Sbjct: 336 QVFGEGGYFQESINLFHDM-VDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHM 389
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 130/315 (41%), Gaps = 22/315 (6%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + + ++ ++ ++G P ++ LI AY A G + A ++ +M
Sbjct: 229 LVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADA---GNVHGAAGVFKQM- 284
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
Q GG P +++L R ++ +Q +F ++ Y+ LI +
Sbjct: 285 QRGGCAPDVETYSTLLRIYGNQG------CFEQVRSLFSDMKDLSTPPTVATYNSLIQVF 338
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+ +E I+L +M +G + ++L VC + G +A K +L +++
Sbjct: 339 G-EGGYFQESINLFH-DMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTP 396
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
A + +Y K+ + +L + ++E V AY +I+ K S +
Sbjct: 397 SLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGSTL 456
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK------CRPNRTIYGIYLE 479
+ G + + S ++ Y +G+HD FSE +K R + T+ G+Y
Sbjct: 457 YAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQKEGSEVDERTHETLLGVYC- 515
Query: 480 SLKNAGNIEKAEEIF 494
+ G +E+A+E F
Sbjct: 516 ---DMGLLEEAKEEF 527
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 118/272 (43%), Gaps = 17/272 (6%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ TF +I + A G + A I++ M++ G P +N+L LV K
Sbjct: 562 PTTRTFLPIIHGFARA---GEMRRALEIFD-MMRRSGCIPTVHTYNALILGLVEK----- 612
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ +A I + +G+ + Y+ L + Y D E+ ++ G E
Sbjct: 613 -RQMTKAVAILDEMNVAGVGPNEHTYTTL--MQGYASLGDTEKAFQYFTVLRNEGLEIDV 669
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIF 390
++L+ C K G ++ A + S IP FVY + + +A+ G+ ++ ++
Sbjct: 670 YTYEALLKSCCKSGRMQSALAVTKEM--SAKNIPRNTFVYNILIDGWARRGDVWEAADLM 727
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
++M++ + Y I CKA + + +++E +G+KP + +Y L N +
Sbjct: 728 QQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARA 787
Query: 451 GMHDRLHLAFSEC-LEKCRPNRTIYGIYLESL 481
M ++ F E L +P++ +Y + SL
Sbjct: 788 SMPEKALSCFEEMKLAGFKPDKAVYHCLVTSL 819
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 140/350 (40%), Gaps = 16/350 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ Y G+ R F+ + +G PS + LI AY V ++EA +M
Sbjct: 290 MVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYA---VGRDMEEALHCVRKMK 346
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
+ G + + +V GG +K A+ F + IY G+I+
Sbjct: 347 EEG-----IEMTIVTYSIIV---GGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYA 398
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
H N+D R L +EM++ G + ++ +++ G+ E + RL E
Sbjct: 399 HCQICNMD--RAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFF 456
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
++ + Y K+G+ K+LEI + M+ ++ Y +I K ++ S+
Sbjct: 457 PSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSV 516
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKN 483
++F + G+KP + Y N+ + +G DR + E+ RP + +
Sbjct: 517 FEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFAR 576
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
AG + +A EIF+ M I + N ++ + KA I D M
Sbjct: 577 AGEMRRALEIFDMMRRSGCIPT-VHTYNALILGLVEKRQMTKAVAILDEM 625
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 148/357 (41%), Gaps = 30/357 (8%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + E K + +++++ G P+ +TF+ LI ++S +G EA ++ M+
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS---EGNFKEALKMF-YMM 399
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF-----IFHNLLTSGLEIQKDIYSG 300
+ G P + L L + AEF + + +G+ + + Y+G
Sbjct: 400 EAKGLTPSEVSYGVLLDGLC-----------KNAEFDLARGFYMRMKRNGVCVGRITYTG 448
Query: 301 LIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
+I +D E + LL EM + G + +++ K G + A++ R+
Sbjct: 449 MIDGLCKNGFLD-EAVVLLN-EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 506
Query: 361 ---SDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
S NGI +Y ++G +++ I+ M + ++ ++ LCKA +
Sbjct: 507 VGLSPNGIIYSTLIYNC---CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-PNRTIYGI 476
E M+ G+ P S+ L N Y N G + F E + P YG
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
L+ L G++ +AE+ +H+ V+T N +L+A SG+ KA ++ M
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPA-AVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 679
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 105/265 (39%), Gaps = 47/265 (17%)
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQ 294
D+A I+ RM ++ G QP +NSL AL+ +K+ +AE F T GL
Sbjct: 70 DQALDIFQRMHEIFGCQPGIRSYNSLLNALIES----NKW--DEAESFFLYFETMGLSPN 123
Query: 295 KDIYSGLIWLHSYQDNIDKER---------------------ISLLKK------------ 321
Y+ LI + + DK + I+ L K
Sbjct: 124 LQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFD 183
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT-PAFVYKMEAYAKI 380
EM + G ++ K+GD+ +A + W RLL+ + P P++ + K
Sbjct: 184 EMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKC 243
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G+F +S EI+ M++ + Y +I LC + + + KE E G+ P + Y
Sbjct: 244 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 303
Query: 441 INLTNMYLNLGMHDRLHLAFSECLE 465
+ N YL G ECLE
Sbjct: 304 NTMLNGYLRAG-------RIEECLE 321
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ + + + +L F M + +V Y+ +I L KAE +L+KE ++ G
Sbjct: 446 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGW 505
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFS---ECLEKC-RPNRTIYGIYLESLKNAGNIEK 489
KP M +Y L N L +L +A + + LEK +P+ ++ I + L ++G +E
Sbjct: 506 KPNMITYSLLMN---GLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 562
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
A ++++ M + N + N ++ + DF +A KI+D
Sbjct: 563 ALQLYSEMKQRNCVP-NLVTHNTLMEGFYKVRDFERASKIWD 603
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
Query: 395 ERLG-SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-M 452
E +G S ++ Y+ +I++ C+ ++ + + L+ G P + SY L N G M
Sbjct: 116 ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYM 175
Query: 453 HDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
D L L F E E+ P+ Y I ++ G+I A EI+ + ++ N S N
Sbjct: 176 SDALKL-FDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYN 234
Query: 512 IILSAYLSSGDFVKAEKIYDLM 533
++++ G F ++ +I+ M
Sbjct: 235 VMINGLCKCGKFDESFEIWHRM 256
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 142/343 (41%), Gaps = 20/343 (5%)
Query: 199 CRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN 258
C+ F+ ++ +G P+ ++++ LI AY S G EA S++N I+ G+ P +
Sbjct: 358 CQTAFNTMLAEGLKPNIVSYNALIGAYAS---HGMDKEAFSVFNE-IKKNGFHPDVVSYT 413
Query: 259 SLFRAL--VSKPGGLSKYY-LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER 315
SL A KP K + L + NL++ I GL+ E
Sbjct: 414 SLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLL----------TEA 463
Query: 316 ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME 375
+ +L EM++ G + + ++L C + G + + T A+ +
Sbjct: 464 VEILH-EMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIG 522
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+Y +GE+ K+L ++R M+ + Y+ +I CK + + E ++ +
Sbjct: 523 SYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPL 582
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
Y ++ Y G F++ + CRP+ Y + + A N EKA +F
Sbjct: 583 SKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALF 642
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
M +D + ++ +C+ ++ A+ G K + + M KK
Sbjct: 643 LEMETDD-VQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKK 684
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 131/351 (37%), Gaps = 80/351 (22%)
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
+ AL++ G ++ + A I ++L + + + Y+ LI N KE +++ K
Sbjct: 200 YNALINAHGRAGQW--RWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW-KEALNVCK 256
Query: 321 KEMQQAGFEEGKEVLLSVLRVCA-KEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYA 378
K M + G G +++ + + A K G+ ++ L++ N P T +
Sbjct: 257 K-MTENGV--GPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLV 313
Query: 379 KIGEFMKSLEIFREMQERLGSA--SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
K+G+ K+++IF M+E+ V + II L + E ++ + G+KP
Sbjct: 314 KLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPN 373
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLEK------------------------------ 466
+ SY L Y + GM F+E +
Sbjct: 374 IVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFE 433
Query: 467 ------CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD-------------------- 500
C+PN Y +++ + G + +A EI + M +
Sbjct: 434 LMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCG 493
Query: 501 --------------QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
+ I +NT + N + +YLS G++ KA +Y M KK
Sbjct: 494 QKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKK 544
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 168/392 (42%), Gaps = 83/392 (21%)
Query: 175 WYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCL 234
W + F T L + K++K + +FD +I+ +P+E+TF+++I Y + G +
Sbjct: 476 WNNYTF---TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYC---LVGNI 529
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK---PGGLSKYY-----LQQAEFIFHNL 286
+A +Y++M+++G +P N +R+L+S G+SK L+ + + +N
Sbjct: 530 RKAFQLYDQMVEMG-LKP----DNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNF 584
Query: 287 LTSGL-----------------------EIQKDIYSGLIWLHSYQDNIDKERISLLKKEM 323
+ L ++ D+ S I +++ DKE+ +L +EM
Sbjct: 585 SLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 644
Query: 324 QQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL------------------------- 358
++ G + ++ +KE ++ A W ++
Sbjct: 645 KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYL 704
Query: 359 ---------LESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM-QERLGSASVPAYH 406
+ + N +P F Y ++ +A G+ K+ ++ M Q L AS+ +++
Sbjct: 705 GSAELLCKEMLAGNVLPN-KFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL--ASIVSFN 761
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK 466
+I+ LCKA + + LM++ E+G P SY + + +G ++ ++E L K
Sbjct: 762 ILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 821
Query: 467 -CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+P+ Y I++ G +KA I+ +M
Sbjct: 822 GLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 853
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 144/357 (40%), Gaps = 24/357 (6%)
Query: 183 ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYN 242
A+++ + K R+FA RD+FD ++ G E + I AY + LD A +
Sbjct: 166 ASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRN---LDGARGLVV 222
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
RM + G + +N L L +Q+A + + ++ G+ + Y L+
Sbjct: 223 RM-ESEGVKASAVPYNVLMYGLCKN------MRVQEAVEVKNVMVNIGVTADEVTYRTLV 275
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGF---EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
+ + + E + +M + GF E ++ LR K+ VE+A +L
Sbjct: 276 YGFCRMEEL--EMALRITHDMIRLGFVPSEANCSFMIDELR---KKELVEEAFSLACKL- 329
Query: 360 ESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
D G+ F Y ++ K F + +F+EM R + Y +I LCK
Sbjct: 330 -GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM 388
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGI 476
E L + + G+K + Y +L N Y G DR S + E P Y
Sbjct: 389 IEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSP 448
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ L G++ A E+ M +++ I N + +++ + +A +++D M
Sbjct: 449 LIAGLCRNGDLSSAMELHREM-AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM 504
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 66/342 (19%), Positives = 138/342 (40%), Gaps = 16/342 (4%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
I D+I G VPSE +I + ++EA S+ ++ LG P +N+L
Sbjct: 290 ITHDMIRLGFVPSEANCSFMIDELRKKEL---VEEAFSLACKLGDLG-MVPNVFAYNALI 345
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L A+ +F + GLE + Y+ I +H+ E L
Sbjct: 346 DKLCKNE------RFDDADRLFKEMAGRGLEPNEVTYA--ILIHALCKRGMIEDALCLFD 397
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKI 380
+M+ G + S++ K+G ++ A + L + + PT A + + +
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRA-RGLLSGMVKEGLTPTAASYSPLIAGLCRN 456
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G+ ++E+ REM ER + + + +I CK ++ + L + +++ + P ++
Sbjct: 457 GDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516
Query: 441 INLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+ Y +G + + + +E +P+ Y + L + KA E + +
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIE 541
+ +N S +L G F + ++D M ++ +++
Sbjct: 577 SYAV-LNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLD 617
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 108/260 (41%), Gaps = 18/260 (6%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ QG P ++ F+ ++ LS + + +A + +++M+ + GY P H L
Sbjct: 640 LFREMKEQGVKPDDI-FYTCMIDALSK--EENMIQALNCWDQMV-IDGYSPNTVTHTVLI 695
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L K G YL AE + +L + K Y+ +L + D E+ L
Sbjct: 696 NNLC-KSG-----YLGSAELLCKEMLAGNVLPNKFTYN--CFLDYFATEGDMEKAKDLHS 747
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
M Q + + +C K G +++A ++ ES ++ + K+G
Sbjct: 748 AMLQGHLASIVSFNILIKGLC-KAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMG 806
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ K+ E++ EM + V AY+ I E++ + + +G++P +Y
Sbjct: 807 DINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYR 866
Query: 442 NLTNMYLNLGMHDRLHLAFS 461
L + G+ LH FS
Sbjct: 867 ALLS-----GISLMLHYDFS 881
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 142/343 (41%), Gaps = 20/343 (5%)
Query: 199 CRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN 258
C+ F+ ++ +G P+ ++++ LI AY S G EA S++N I+ G+ P +
Sbjct: 358 CQTAFNTMLAEGLKPNIVSYNALIGAYAS---HGMDKEAFSVFNE-IKKNGFHPDVVSYT 413
Query: 259 SLFRAL--VSKPGGLSKYY-LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER 315
SL A KP K + L + NL++ I GL+ E
Sbjct: 414 SLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLL----------TEA 463
Query: 316 ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME 375
+ +L EM++ G + + ++L C + G + + T A+ +
Sbjct: 464 VEILH-EMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIG 522
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+Y +GE+ K+L ++R M+ + Y+ +I CK + + E ++ +
Sbjct: 523 SYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPL 582
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
Y ++ Y G F++ + CRP+ Y + + A N EKA +F
Sbjct: 583 SKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALF 642
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
M +D + ++ +C+ ++ A+ G K + + M KK
Sbjct: 643 LEMETDD-VQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKK 684
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 131/351 (37%), Gaps = 80/351 (22%)
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
+ AL++ G ++ + A I ++L + + + Y+ LI N KE +++ K
Sbjct: 200 YNALINAHGRAGQW--RWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW-KEALNVCK 256
Query: 321 KEMQQAGFEEGKEVLLSVLRVCA-KEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYA 378
K M + G G +++ + + A K G+ ++ L++ N P T +
Sbjct: 257 K-MTENGV--GPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLV 313
Query: 379 KIGEFMKSLEIFREMQERLGSA--SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
K+G+ K+++IF M+E+ V + II L + E ++ + G+KP
Sbjct: 314 KLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPN 373
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLEK------------------------------ 466
+ SY L Y + GM F+E +
Sbjct: 374 IVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFE 433
Query: 467 ------CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD-------------------- 500
C+PN Y +++ + G + +A EI + M +
Sbjct: 434 LMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCG 493
Query: 501 --------------QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
+ I +NT + N + +YLS G++ KA +Y M KK
Sbjct: 494 QKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKK 544
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 156/370 (42%), Gaps = 25/370 (6%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
RV++ M ++H D + L + K K + RD+FD + +G+ P +++I++
Sbjct: 308 AVRVFKEM-RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 366
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
Y + +GCL + +++ M+ G P N L +A + G+ L +A I
Sbjct: 367 NGYAT---KGCLVDMTDLFDLMLG-DGIAPDFYTFNVLIKAYAN--CGM----LDKAMII 416
Query: 283 FHNLLTSGLE----IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
F+ + G++ + + + L + D ++K +M G K +
Sbjct: 417 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK------FNQMIDQGVAPDKYAYNCL 470
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
++ G + A++ ++ + + F + K+G M + IF ++ +G
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF-DLTVNVG 529
Query: 399 -SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
Y +++ C + E + V G++P + Y L N Y +G D
Sbjct: 530 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 589
Query: 458 LAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F E L++ +P+ +Y I ++ L AG A+ F+ M ++ I ++ + NI+L
Sbjct: 590 SLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEM-TESGIAMDICTYNIVLRG 648
Query: 517 YLSSGDFVKA 526
+ F +A
Sbjct: 649 LFKNRCFDEA 658
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 112/257 (43%), Gaps = 11/257 (4%)
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE--GKEVLLSVLR 340
F LL +GL + I + L+ D+ LL + + + +LL L
Sbjct: 134 FGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 193
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKSLEIFREMQERL 397
K G +D LR++ + +P A+ ++ + K G+ K+ ++F+EM +R
Sbjct: 194 DQGKSGQADD----LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 249
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
+ Y+ ++ LCKA + E+ +++ V + P +Y NL Y + G
Sbjct: 250 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 309
Query: 458 LAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F E P+ + + SL G I++A ++F+ M + + + S NI+L+
Sbjct: 310 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM-AMKGQNPDVFSYNIMLNG 368
Query: 517 YLSSGDFVKAEKIYDLM 533
Y + G V ++DLM
Sbjct: 369 YATKGCLVDMTDLFDLM 385
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 153/400 (38%), Gaps = 90/400 (22%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
D+FD ++ G P TF++LI AY + G LD+A I+N M + G +P + ++
Sbjct: 380 DLFDLMLGDGIAPDFYTFNVLIKAYANC---GMLDKAMIIFNEM-RDHGVKPDVVTYRTV 435
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
AL + K + A F+ ++ G+ K Y+ LI ++ K + L
Sbjct: 436 IAALCR----IGK--MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK--ELI 487
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW------------------------- 355
E+ G S++ K G V DA+ +
Sbjct: 488 SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLV 547
Query: 356 ------LRLLES--DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
LR+ ++ GI VY + Y KIG + L +FREM +R S Y
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY 607
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSY-INLTNMYLNLGMHDRLHLAFSE-- 462
II+ L +A T + E E+G+ + +Y I L ++ N + + L F E
Sbjct: 608 SIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFL-FKELR 666
Query: 463 --------------------------------CLEKCR--PNRTIYGIYLESLKNAGNIE 488
+ + R P+ Y I + +L G +E
Sbjct: 667 AMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVE 726
Query: 489 KAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKA 526
+AE++F+ M Q G N+R N ++ L + V+A
Sbjct: 727 EAEDMFSSM---QNAGCEPNSRLLNHVVRELLKKNEIVRA 763
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 61/322 (18%), Positives = 133/322 (41%), Gaps = 57/322 (17%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ + ++ +I + +G +++AC ++ M+Q G P +NS+ AL
Sbjct: 217 PNVVAYNTVIDGFFK---EGDVNKACDLFKEMVQ-RGIPPDLVTYNSVVHALCKARA--- 269
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ +AE ++ + Y+ LI+ +S KE + + K+ + + +
Sbjct: 270 ---MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQW-KEAVRVFKEMRRHSILPD-- 323
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
V LS+L M + K G+ ++ ++F
Sbjct: 324 VVTLSML----------------------------------MGSLCKYGKIKEARDVFDT 349
Query: 393 MQERLGSASVPAYHKIIELL----CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
M + + V +Y+ ++ C + T+L + ++ + G+ P ++ L Y
Sbjct: 350 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD----GIAPDFYTFNVLIKAYA 405
Query: 449 NLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
N GM D+ + F+E + +P+ Y + +L G ++ A E FN M DQ + +
Sbjct: 406 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM-IDQGVAPDK 464
Query: 508 RSCNIILSAYLSSGDFVKAEKI 529
+ N ++ + + G +KA+++
Sbjct: 465 YAYNCLIQGFCTHGSLLKAKEL 486
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 132/300 (44%), Gaps = 18/300 (6%)
Query: 246 QLGGYQPRPSL--HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
QL G +P P + N L +LV K K+Y L++ I+ ++Y+ I
Sbjct: 59 QLLGIRPLPPVVVFNKLLGSLVKK-----KHYSTVISLCKQMDLSN---IRPNVYTLTIL 110
Query: 304 L----HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
+ HS +D++ +L K M + G + ++L + + DA K + +
Sbjct: 111 INCLCHSNRDHVHFAFSALGK--MFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIG 168
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
+ + ++ KIG +L++ ++M+E+ V AY+ +I+ LCK
Sbjct: 169 KMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRAN 228
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYL 478
E V+ G+ P + +Y ++ + + NLG + F + + + PN + I +
Sbjct: 229 EAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILV 288
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKY 538
+ L G I +A +F M ++ + + + + ++ Y +A+K++D+M K +
Sbjct: 289 DGLCKEGMILEARRVF-EMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGF 347
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 164/381 (43%), Gaps = 18/381 (4%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M++ + D + D + K+R+ + F ++++QG P+ +T+ ++ + +
Sbjct: 202 MEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNL-- 259
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSL-FRALVSKPGGLSKY-YLQQAEFIFHNLLT 288
G L+EA S++ +MI R + N++ F LV GL K + +A +F +
Sbjct: 260 -GQLNEATSLFKQMIG------RNVMPNTVTFTILVD---GLCKEGMILEARRVFEMMTE 309
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
+G+E YS L+ + Q +D+ + L M GF V ++ K +
Sbjct: 310 NGVEPDAYTYSALMDGYCLQSQMDEAQ--KLFDIMVGKGFAPSVRVYNILINGHCKSRRL 367
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
+A+ + + D T + M+ + + G + ++F+EM Y +
Sbjct: 368 NEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSIL 427
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-C 467
++ LCK + L+K E+ ++P + Y L N G + FS K
Sbjct: 428 LDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGI 487
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
+P+ Y + + L G +A E+F M + + N+ + N+ + +L +GD A
Sbjct: 488 QPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLP-NSCTYNVAIQGFLRNGDPSNAV 546
Query: 528 KIYDLMCLKKYEIESAWMEKL 548
++ + M + + +S+ + L
Sbjct: 547 RLIEEMVGRGFSADSSTFQML 567
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 152/363 (41%), Gaps = 13/363 (3%)
Query: 134 ILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFA-LATKLADYMGK 192
+LN + + +D T+L E R +E+ +++ R + LA+ + +G+
Sbjct: 138 LLNFESRLCGSDDYTFLLRELGNRGEWAKAIRCFEFAVRREQRRNEQGKLASAMISILGR 197
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
+ +++F+ +N+G + F LI AY + G DEA ++ M + G +P
Sbjct: 198 LGQVELAKNVFETALNEGYGNTVYAFSALISAYGRS---GYCDEAIKVFETM-KSSGLKP 253
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+N++ A GG+ +A IF +L +G++ + ++ L+ + +
Sbjct: 254 NLVTYNAVIDA--CGKGGVD---FNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWE 308
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
R L EM G E+ ++L K G ++ A + + +
Sbjct: 309 AARN--LFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYST 366
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++ YAK G ++L +F EM+ +Y+ ++ + K E ++ KE +G
Sbjct: 367 VIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSG 426
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAE 491
+K +Y L Y G ++ + F E E+ PN Y ++ G ++A
Sbjct: 427 IKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAM 486
Query: 492 EIF 494
E+F
Sbjct: 487 EVF 489
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 162/377 (42%), Gaps = 17/377 (4%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R+ + E V+E + + + +A + ++ Y G+ + +F+ + + G P+
Sbjct: 197 RLGQVELAKNVFETALNEGYGNTVYAFSALISAY-GRSGYCDEAIKVFETMKSSGLKPNL 255
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+T++ +I A V + A I++ M++ G QP NSL V GGL
Sbjct: 256 VTYNAVIDACGKGGVD--FNRAAEIFDEMLR-NGVQPDRITFNSLL--AVCGRGGL---- 306
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+ A +F +L G+E +DI++ L + + + EM +
Sbjct: 307 WEAARNLFSEMLYRGIE--QDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTY 364
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
+V+ AK G +++A + + + G+ ++ + YAK+G F ++L + +EM+
Sbjct: 365 STVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMES 424
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
Y+ ++ K + E + + +E + P + +Y L ++Y G++
Sbjct: 425 SGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQE 484
Query: 456 LHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
F E + + + +Y +++L G +E A + M + + I N + N I+
Sbjct: 485 AMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEM-TKEGIRPNVVTYNSII 543
Query: 515 SAYLSSGDFVKAEKIYD 531
A+ SG AE + D
Sbjct: 544 DAFGRSGS---AECVID 557
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 155/368 (42%), Gaps = 51/368 (13%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
R++++ ++ G P+ +T++ ++ ++ +G + EA + +M Q G P +N
Sbjct: 187 REVYNVMVECGICPTVVTYNTMLDSFCK---KGMVQEALQLLFQM-QAMGCSPNDVTYNV 242
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
L L S G + +QA+ + ++L GLE+ Y LI Y + E S L
Sbjct: 243 LVNGL-SHSGEM-----EQAKELIQDMLRLGLEVSVYTYDPLI--RGYCEKGQIEEASRL 294
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYA 378
+EM G +++ K G V DA K L ++ + N +P ++ + Y
Sbjct: 295 GEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARK-LLDVMVNKNLMPDLVSYNTLIYGYT 353
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
++G ++ +F E++ R + SV Y+ +I+ LC+ + ++ L E ++ G P +
Sbjct: 354 RLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVF 413
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNR-------------------------- 471
++ + +G F E L + +P+R
Sbjct: 414 TFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEM 473
Query: 472 ---------TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
Y ++++ L GN+++A E+ M + + + +II A+L +G
Sbjct: 474 LARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSII-HAHLMAGH 532
Query: 523 FVKAEKIY 530
KA ++
Sbjct: 533 LRKARALF 540
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 93/248 (37%), Gaps = 12/248 (4%)
Query: 204 DDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRA 263
D++I G P TF + + G L A +++ M+ G R + +
Sbjct: 401 DEMIKHGPDPDVFTFTTFVRGFCK---MGNLPMAKELFDEMLNRGLQPDRFAYITRIVGE 457
Query: 264 LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEM 323
L K G SK + Q E +L G D+ + +++ + + S L K+M
Sbjct: 458 L--KLGDPSKAFGMQEE-----MLARGFP--PDLITYNVFIDGLHKLGNLKEASELVKKM 508
Query: 324 QQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEF 383
G S++ G + A +L +L + + +YA G
Sbjct: 509 LYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRL 568
Query: 384 MKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINL 443
++ F EM E+ +V Y+ +I LCK + + + E G+ P +Y L
Sbjct: 569 KLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTIL 628
Query: 444 TNMYLNLG 451
N NLG
Sbjct: 629 INENCNLG 636
>gi|356527376|ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Glycine max]
Length = 515
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 127/296 (42%), Gaps = 10/296 (3%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E+ +V+E + +Q WY+ D + KL +GK ++ K ++F ++++G V ++
Sbjct: 138 ESALKVFELLHEQIWYKPDTGVYIKLIVMLGKCKQPEKAHELFQAMVDEGCVLDCESYTA 197
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ AY + G LD+A S+ M G QP ++ L ++ L + + +
Sbjct: 198 LLSAYSRS---GLLDKAFSLLEEMKNTPGCQPDVQTYSILLKSC------LQVFAFDKIQ 248
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ ++ G++ Y+ LI + E S+L + + + + S LR
Sbjct: 249 SLLSDMTNRGIKPNTVTYNTLIDAYGKARKFS-EMESILVEMLADRYCQPDVWTMNSTLR 307
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
G +E EK + + + F +++Y K ++ K + MQ+ S
Sbjct: 308 AFGNIGQIETMEKCYEKFQNAGIQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQKYHYSW 367
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
++ ++ +I+ KA + + E L + +KP + +L Y G +++
Sbjct: 368 TIVTFNIVIDAFGKAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKI 423
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 10/165 (6%)
Query: 386 SLEIFREMQERL-GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT 444
+L++F + E++ Y K+I +L K ++ E L + V+ G SY L
Sbjct: 140 ALKVFELLHEQIWYKPDTGVYIKLIVMLGKCKQPEKAHELFQAMVDEGCVLDCESYTALL 199
Query: 445 NMYLNLGMHDRLHLAFSECLEK-----CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+ Y G+ D+ AFS E C+P+ Y I L+S +K + + + M +
Sbjct: 200 SAYSRSGLLDK---AFSLLEEMKNTPGCQPDVQTYSILLKSCLQVFAFDKIQSLLSDM-T 255
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAW 544
++ I NT + N ++ AY + F + E I M +Y W
Sbjct: 256 NRGIKPNTVTYNTLIDAYGKARKFSEMESILVEMLADRYCQPDVW 300
Score = 39.7 bits (91), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 113/258 (43%), Gaps = 13/258 (5%)
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
++A +F ++ G + + Y+ L+ +S +DK SLL++ G + +
Sbjct: 174 EKAHELFQAMVDEGCVLDCESYTALLSAYSRSGLLDKA-FSLLEEMKNTPGCQPDVQTYS 232
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM- 393
+L+ C + + + + ++ GI Y ++AY K +F + I EM
Sbjct: 233 ILLKSCLQVFAFDKIQSLLSDM--TNRGIKPNTVTYNTLIDAYGKARKFSEMESILVEML 290
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
+R V + + + E E ++F G++P + ++ L + Y +
Sbjct: 291 ADRYCQPDVWTMNSTLRAFGNIGQIETMEKCYEKFQNAGIQPNVQTFNILLDSYGKAQDY 350
Query: 454 DRLHLAFSECLEKCRPNRTI--YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
++ A E ++K + TI + I +++ AG++++ E +F M S++ C+
Sbjct: 351 KKMS-AVMEYMQKYHYSWTIVTFNIVIDAFGKAGDLKQMEYLFRLMRSERIKPSCVTLCS 409
Query: 512 IILSAYLSSGDFVKAEKI 529
++ AY +G K EKI
Sbjct: 410 LV-RAYARAG---KPEKI 423
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 136/334 (40%), Gaps = 21/334 (6%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M D + T L D +GKE K + +D+ + P+ +T+ +L+ A+ A
Sbjct: 353 MVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRA-- 410
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY--YLQQAE--FIFHNL 286
G +D A + +M + P +S+ LV K G L K Y+++ + I N+
Sbjct: 411 -GNIDGAEQVLLQM-EEKSVIPNVVTFSSIINGLV-KRGCLGKAADYMRKMKDSGIAPNV 467
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEG 346
+T G I G + +D R +M G E V+ S++ K G
Sbjct: 468 VTYGTLID-----GFFKFQGQEAALDVYR------DMLHEGVEANNFVVDSLVNGLRKNG 516
Query: 347 DVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
++E AE + + E + + M+ K G + ++ +E+ E+ S Y+
Sbjct: 517 NIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYN 576
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR-LHLAFSECLE 465
I LC + +S +KE TG++P +Y + G + L L
Sbjct: 577 VFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRN 636
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+PN Y + L AG ++KA+ + N M S
Sbjct: 637 SIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMAS 670
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 153 HCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRV 212
HC + + F +Y M+ Q + A L + + + + D+ G
Sbjct: 757 HC-KSSHLDNAFAIYAQMLHQGLSP-NIATFNTLLGGLESAGRIGEADTVLSDMKKVGLE 814
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ +T+ IL+ Y + EA +Y M+ G+ P+ S +NSL +K G
Sbjct: 815 PNNLTYDILVTGYAKKSNK---VEALRLYCEMVS-KGFIPKASTYNSLMSDF-AKAG--- 866
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ QA+ +F + G+ Y I L+ + + + +L K+M++ GF+ K
Sbjct: 867 --MMNQAKELFSEMKRRGVLHTSSTYD--ILLNGWSKLRNGIEVRILLKDMKELGFKPSK 922
Query: 333 EVLLSVLRVCAKEGDVEDAEK 353
+ S+ R ++ G +A +
Sbjct: 923 GTISSMSRAFSRPGMTGEARR 943
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 156/370 (42%), Gaps = 25/370 (6%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
RV++ M ++H D + L + K K + RD+FD + +G+ P +++I++
Sbjct: 321 AVRVFKEM-RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 379
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
Y + +GCL + +++ M+ G P N L +A + G+ L +A I
Sbjct: 380 NGYAT---KGCLVDMTDLFDLMLG-DGIAPDFYTFNVLIKAYAN--CGM----LDKAMII 429
Query: 283 FHNLLTSGLE----IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
F+ + G++ + + + L + D ++K +M G K +
Sbjct: 430 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK------FNQMIDQGVAPDKYAYNCL 483
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
++ G + A++ ++ + + F + K+G M + IF ++ +G
Sbjct: 484 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF-DLTVNVG 542
Query: 399 -SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
Y +++ C + E + V G++P + Y L N Y +G D
Sbjct: 543 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 602
Query: 458 LAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F E L++ +P+ +Y I ++ L AG A+ F+ M ++ I ++ + NI+L
Sbjct: 603 SLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEM-TESGIAMDICTYNIVLRG 661
Query: 517 YLSSGDFVKA 526
+ F +A
Sbjct: 662 LFKNRCFDEA 671
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 112/257 (43%), Gaps = 11/257 (4%)
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE--GKEVLLSVLR 340
F LL +GL + I + L+ D+ LL + + + +LL L
Sbjct: 147 FGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 206
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKSLEIFREMQERL 397
K G +D LR++ + +P A+ ++ + K G+ K+ ++F+EM +R
Sbjct: 207 DQGKSGQADD----LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 262
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
+ Y+ ++ LCKA + E+ +++ V + P +Y NL Y + G
Sbjct: 263 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 322
Query: 458 LAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F E P+ + + SL G I++A ++F+ M + + + S NI+L+
Sbjct: 323 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM-AMKGQNPDVFSYNIMLNG 381
Query: 517 YLSSGDFVKAEKIYDLM 533
Y + G V ++DLM
Sbjct: 382 YATKGCLVDMTDLFDLM 398
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 61/322 (18%), Positives = 133/322 (41%), Gaps = 57/322 (17%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ + ++ +I + +G +++AC ++ M+Q G P +NS+ AL
Sbjct: 230 PNVVAYNTVIDGFFK---EGDVNKACDLFKEMVQ-RGIPPDLVTYNSVVHALCKARA--- 282
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ +AE ++ + Y+ LI+ +S KE + + K+ + + +
Sbjct: 283 ---MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQW-KEAVRVFKEMRRHSILPD-- 336
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
V LS+L M + K G+ ++ ++F
Sbjct: 337 VVTLSML----------------------------------MGSLCKYGKIKEARDVFDT 362
Query: 393 MQERLGSASVPAYHKIIELL----CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
M + + V +Y+ ++ C + T+L + ++ + G+ P ++ L Y
Sbjct: 363 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD----GIAPDFYTFNVLIKAYA 418
Query: 449 NLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
N GM D+ + F+E + +P+ Y + +L G ++ A E FN M DQ + +
Sbjct: 419 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM-IDQGVAPDK 477
Query: 508 RSCNIILSAYLSSGDFVKAEKI 529
+ N ++ + + G +KA+++
Sbjct: 478 YAYNCLIQGFCTHGSLLKAKEL 499
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 157/368 (42%), Gaps = 25/368 (6%)
Query: 165 RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
RV++ M ++H D + L + K K + RD+FD + +G+ P +++I++
Sbjct: 313 RVFKEM-RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 371
Query: 225 YLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
Y + +GCL + +++ M+ G P N L +A + G+ L +A IF+
Sbjct: 372 YAT---KGCLVDMTDLFDLMLG-DGIAPDFYTFNVLIKAYAN--CGM----LDKAMIIFN 421
Query: 285 NLLTSGLE----IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ G++ + + + L + D ++K +M G K +++
Sbjct: 422 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK------FNQMIDQGVAPDKYAYNCLIQ 475
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-S 399
G + A++ ++ + + F + K+G M + IF ++ +G
Sbjct: 476 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF-DLTVNVGLH 534
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
Y+ +++ C + E + V G++P + Y L N Y +G D
Sbjct: 535 PDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSL 594
Query: 460 FSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
F E L++ +P+ +Y I ++ L AG A+ F+ M ++ I ++ + NI+L
Sbjct: 595 FREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEM-TESGIAMDICTYNIVLRGLF 653
Query: 519 SSGDFVKA 526
+ F +A
Sbjct: 654 KNRCFDEA 661
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 112/257 (43%), Gaps = 11/257 (4%)
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE--GKEVLLSVLR 340
F LL +GL + I + L+ D+ LL + + + +LL L
Sbjct: 137 FGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 196
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKSLEIFREMQERL 397
K G +D LR++ + +P A+ ++ + K G+ K+ ++F+EM +R
Sbjct: 197 DQGKSGQADD----LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 252
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
+ Y+ ++ LCKA + E+ +++ V + P +Y NL Y + G
Sbjct: 253 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 312
Query: 458 LAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F E P+ + + SL G I++A ++F+ M + + + S NI+L+
Sbjct: 313 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM-AMKGQNPDVFSYNIMLNG 371
Query: 517 YLSSGDFVKAEKIYDLM 533
Y + G V ++DLM
Sbjct: 372 YATKGCLVDMTDLFDLM 388
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 61/322 (18%), Positives = 133/322 (41%), Gaps = 57/322 (17%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ + ++ +I + +G +++AC ++ M+Q G P +NS+ AL
Sbjct: 220 PNVVAYNTVIDGFFK---EGDVNKACDLFKEMVQ-RGIPPDLVTYNSVVHALCKARA--- 272
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ +AE ++ + Y+ LI+ +S KE + + K+ + + +
Sbjct: 273 ---MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQW-KEAVRVFKEMRRHSILPD-- 326
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
V LS+L M + K G+ ++ ++F
Sbjct: 327 VVTLSML----------------------------------MGSLCKYGKIKEARDVFDT 352
Query: 393 MQERLGSASVPAYHKIIELL----CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
M + + V +Y+ ++ C + T+L + ++ + G+ P ++ L Y
Sbjct: 353 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD----GIAPDFYTFNVLIKAYA 408
Query: 449 NLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
N GM D+ + F+E + +P+ Y + +L G ++ A E FN M DQ + +
Sbjct: 409 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM-IDQGVAPDK 467
Query: 508 RSCNIILSAYLSSGDFVKAEKI 529
+ N ++ + + G +KA+++
Sbjct: 468 YAYNCLIQGFCTHGSLLKAKEL 489
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 146/347 (42%), Gaps = 47/347 (13%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ N G P + TF+ LI AY G +A +Y+ M++ G+ P + +N+L
Sbjct: 500 VFREMKNCGFEPGKDTFNTLISAYGRC---GSELDAAKMYDEMMK-AGFTPCATTYNALL 555
Query: 262 RALVSKPG---------GLSKYYLQQAEFIFHNLL--------TSGLE-IQKDIYSGLI- 302
AL + + + E F +L GLE I KDIY G I
Sbjct: 556 NALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIF 615
Query: 303 --WLHSYQDNIDKERISLLK------KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKT 354
W+ + + ++ +E+ + G++ + S+L + AK E A+K
Sbjct: 616 PSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKM 675
Query: 355 WLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+ ES G+ Y M YA+ GE K+ EI + + + S + +Y+ II+
Sbjct: 676 LDLIRES--GLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGF 733
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNR 471
C+ + +M E G+ P + +Y + Y GM + S ++K C+PN
Sbjct: 734 CRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNE 793
Query: 472 TIYGI----------YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTR 508
Y I Y +++ I+ ++ F++ HS Q + + R
Sbjct: 794 LTYKIIVDGYCKARKYQDAMDFIFGIKNIDDSFDN-HSTQRLASHVR 839
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 81/186 (43%), Gaps = 1/186 (0%)
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
++I L EM+ G + + +V+ C +EG + +A++ ++ L S T +
Sbjct: 285 DKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNAL 344
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
++ + K G + ++L I +EM++ + Y++++ +A E +++ G+
Sbjct: 345 LQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGV 404
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEE 492
P +Y + N Y G + F++ + C PN Y L L E+ +
Sbjct: 405 MPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIK 464
Query: 493 IFNHMH 498
I + M
Sbjct: 465 ILSDMR 470
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 10/220 (4%)
Query: 304 LHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+HSY + N + + + +MQ+AG E + +++ + AK G + A + + R+ +
Sbjct: 380 IHSYGRANYLNDAVEVFN-QMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAA- 437
Query: 363 NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
G+ F Y + K G + ++F EM E+ ++ Y+ +I L KA +
Sbjct: 438 -GLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQN 496
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLE 479
L ++ G +P +Y + + + G D FSE K P+ +YG+ ++
Sbjct: 497 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVD 556
Query: 480 SLKNAGNIEKAEEIFNHM-HSDQTIGVNTRSCNIILSAYL 518
AGN+EKA E + M H+ + N +CN +LSA+L
Sbjct: 557 LWGKAGNVEKAWEWYQAMLHAG--LCPNVPTCNSLLSAFL 594
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 150/388 (38%), Gaps = 67/388 (17%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+++++ + W+ Q ++ D T + +G+ ++F + D ++ G P+
Sbjct: 314 QLQDHTVALGFFHWLKQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTV 373
Query: 216 MTFHILI-----VAYLSAPVQ--------GC-------------------LDEACSIYNR 243
+T++ LI YL+ V+ GC L+ A +Y R
Sbjct: 374 VTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQR 433
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M Q G P ++ + L K G +L A+ +F ++ G Y+ +I
Sbjct: 434 M-QAAGLSPDTFTYSVMINCL-GKAG-----HLAAADKLFCEMIEQGCVPNLVTYNIMIA 486
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
L + N + L ++MQ AGFE K V+ V G +++AE + ++ N
Sbjct: 487 LQAKARNY--QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSE-MKRKN 543
Query: 364 GIPT-PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+P P + ++ + K G K+ E ++ M +VP
Sbjct: 544 WVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPT----------------CN 587
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIY--GIYLES 480
SL+ F+ +P NL LNLG++ L ++ L C R+ Y G Y E
Sbjct: 588 SLLSAFLRVNR---LPDAYNLLQSMLNLGLNPSLQ-TYTLLLSCCTEARSPYDMGCYCEL 643
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTR 508
+ G+ A + + S G N R
Sbjct: 644 MSVTGH--PAHMFLSSLPSAGPDGQNVR 669
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 138/349 (39%), Gaps = 27/349 (7%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P +T+ ILI QG + +A +Y M P H+ + + L K G LS
Sbjct: 359 PDLVTYSILIHGLCK---QGKVQQAIQLYKEMC-FNRIFPNSFAHSGILKGLCEK-GMLS 413
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
A F +L+ S L +Y+ I + Y D E L K ++
Sbjct: 414 -----DARMYFDSLIMSNLRPDVTLYN--IMIDGYVKLGDVEEAVRLYKRLRDKAITPSI 466
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESD--NGIPTPAFVYK--MEAYAKIGEFMKSLE 388
S++ K V +A RLLES +G+ A Y M AY + G K E
Sbjct: 467 VTFNSLIYGFCKNRKVVEAR----RLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHE 522
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+ EM + +V Y +I+ LCK + E + L+++ G+ P +Y + +
Sbjct: 523 LLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFC 582
Query: 449 NL-GMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
M L + P Y + ++ L G++E A+ + + D+ I +
Sbjct: 583 KAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQ-DRNINLTK 641
Query: 508 RSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNR 556
+ ++ A+ GD +A K++ M K +E+ DY +NR
Sbjct: 642 VAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIK-----DYSAVINR 685
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/335 (19%), Positives = 144/335 (42%), Gaps = 14/335 (4%)
Query: 206 IINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV 265
+ ++G P +T+ +LI + G ++EA + ++ G+Q L++ L +L
Sbjct: 282 LTDEGLKPDLVTYTVLICGHCQ---MGNIEEALRLRRDLLS-SGFQLNVILYSVLLSSL- 336
Query: 266 SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
K G + + E +NL Q D+ + I +H ++ L KEM
Sbjct: 337 CKRGQVDEALQLLYEMEANNL-------QPDLVTYSILIHGLCKQGKVQQAIQLYKEMCF 389
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMK 385
+L+ ++G + DA + L+ S+ + ++ Y K+G+ +
Sbjct: 390 NRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEE 449
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
++ +++ ++++ + S+ ++ +I CK + L++ G++P +Y L N
Sbjct: 450 AVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMN 509
Query: 446 MYLNLGMHDRLH-LAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
Y G ++LH L L+ P Y + ++ L +E++ ++ M + + +
Sbjct: 510 AYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRA-KGLA 568
Query: 505 VNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
+ + N I+ + + D KA ++ D M + E
Sbjct: 569 PDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLE 603
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K RK + R + + I G PS +T+ L+ AY +G +++ + M L +
Sbjct: 478 KNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCE---EGNINKLHELLLEM-NLKDIE 533
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P + + + L + L+++ + ++ GL + Y+ +I +
Sbjct: 534 PTVVTYTVVIKGLCKQRK------LEESVQLLEDMRAKGLAPDQITYNTII--QCFCKAK 585
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
D + L +M E ++ + GDVEDA++ + L + + + A+
Sbjct: 586 DMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYT 645
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCK 414
++A+ G+ +++++F +M E+ S+ Y +I LCK
Sbjct: 646 TMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCK 688
>gi|356546852|ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 481
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 142/356 (39%), Gaps = 56/356 (15%)
Query: 182 LATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIY 241
+ ++ D +GK ++F + + D++ + + E F L+ ++ A +DEA ++
Sbjct: 104 VCNEIVDILGKMQRFQELHQVLDEMSKREELLDEAVFATLVRRFVGAHK---VDEAIQLF 160
Query: 242 NRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSG 300
R + G L++ FR L+ L +Y +++ AE +FHN + GL +++
Sbjct: 161 YRRKEFG-----LELNSEAFRTLLM---WLCRYKHVEDAEALFHNSVKKGLRADIKMWNV 212
Query: 301 LIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
++ G VL G+ +A++ W ++
Sbjct: 213 IL---------------------------NGWCVL----------GNSHEAKRVWRDIVA 235
Query: 361 SDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
S + ++A K G+ +L++FR M ++ G V + II+ LC +
Sbjct: 236 SPCKPDIFTYATFIKALTKKGKLGTALKLFRGMWDKGGKPDVVICNCIIDALCFKKRIPE 295
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK---CRPNRTIYGIY 477
+ + E G +P + +Y +L + +++ E K C PN Y
Sbjct: 296 ALEIFCDMSERGCEPNVATYNSLIKYMCKIQRMKKVYELVDEMERKKGSCLPNAVTYCYL 355
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
L+SLK G + + E G+N N++L Y+ D K ++ M
Sbjct: 356 LKSLKEPGEVCRVLERMER----NGCGMNDDVYNMVLRLYMKWDDGDGVRKTWEEM 407
>gi|125560423|gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indica Group]
Length = 608
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 153/378 (40%), Gaps = 55/378 (14%)
Query: 166 VYEWMMQQHWYRF---DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
+ EW+ QHW+ F DF + L GK F++ + + +G PS ++ L+
Sbjct: 128 ILEWLRTQHWWNFSEMDFLM---LVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALM 184
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
AY A +A +++ RM Q G +P + + ++ V KY ++AE I
Sbjct: 185 EAYGRAK---QYRKAEAVFRRM-QTSGPEPSAVTYQIILKSFVEG----DKY--KEAEAI 234
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
F +LL ++A F+ +++ ++ +
Sbjct: 235 FEDLLNE----------------------------------KRASFKPDQKMFHMMIYMY 260
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
K GD A K + ++ S+ GIP + + ++ + I+ +MQ V
Sbjct: 261 KKAGDYAQARKLFAQM--SERGIPLSTVTFNSLMSFET-DYKEVSNIYDQMQRTALKPDV 317
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
+Y +I+ KA E ++ +E ++ G++P SY L + + G+ + H F
Sbjct: 318 VSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKA 377
Query: 463 CLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
+ P+ Y + + NA +++ AE+ F + D + N ++ Y
Sbjct: 378 MRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKED-GLKPNVVVYGTLMKGYSKLN 436
Query: 522 DFVKAEKIYDLMCLKKYE 539
+ + ++Y+ M ++ E
Sbjct: 437 NVERVMRVYERMRMQGVE 454
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 137/332 (41%), Gaps = 51/332 (15%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
+ +++++ M +Q DF T + + + K + +F+ + ++G P E+T+
Sbjct: 97 QAAYKLFDEMEKQRIVP-DFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTT 155
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQA 279
LI Y + G +++A S++N+M+Q G P + +L GL K + A
Sbjct: 156 LIDGYCKS---GEMEKAFSLHNQMVQ-SGLTPNVVTYTAL-------ADGLCKLGQVDTA 204
Query: 280 EFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVL 339
+ H + GL++ Y+ L+ NI ++ + L++ EM+ AG
Sbjct: 205 NELLHEMCGKGLQLNICTYNSLVNGLCKSGNI-RQAVKLME-EMEVAGMYP--------- 253
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
T F M+AY K GE +K+ E+ REM +R
Sbjct: 254 --------------------------DTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQ 287
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY-LNLGMHDRLHL 458
+V ++ ++ C + E E L+ +E G+ P +Y +L Y + M +
Sbjct: 288 PTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEI 347
Query: 459 AFSECLEKCRPNRTIYGIYLESLKNAGNIEKA 490
C P+ Y I ++ A N+++A
Sbjct: 348 YKGMCARGVMPDSNTYNILIKGHCKARNMKEA 379
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 105/241 (43%), Gaps = 6/241 (2%)
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
D+ S ++ Y + +++ L +EMQ G + S++ + K G V+DAE+
Sbjct: 9 DVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVL 68
Query: 356 LRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
++ + GI VY ++ + K+G + ++F EM+++ AY +I LC
Sbjct: 69 REMI--NQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLC 126
Query: 414 KAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRT 472
+ + + + + G++P +Y L + Y G M L PN
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDL 532
Y + L G ++ A E+ + M + + +N + N +++ SG+ +A K+ +
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEM-CGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEE 245
Query: 533 M 533
M
Sbjct: 246 M 246
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 143/346 (41%), Gaps = 40/346 (11%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ ++ G P +T L+ Y + + +A ++ ++M+++G Y+P N+L
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHSKR---ISDAVALVDQMVEMG-YKPDTVTFNTLI 192
Query: 262 RAL-----VSKPGGLSKYYLQ---QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
L S+ L +Q Q + + + + +GL + DI L
Sbjct: 193 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL------------ 240
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
SLLKK M++ E + +++ K ++DA + ++ GI F Y
Sbjct: 241 ---SLLKK-MEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKM--ETKGIRPDVFTYN 294
Query: 374 --MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
+ G + + + M ER + +V + +I+ K + E L E ++
Sbjct: 295 SLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECLEK-CRPNRTIYGIYLESLKNAGNI 487
+ P + +Y +L N + MHDRL A F + K C PN Y ++ A +
Sbjct: 355 SIDPDIFTYSSLINGFC---MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
E+ E+F M +G NT + N ++ +GD A+KI+ M
Sbjct: 412 EEGMELFREMSQRGLVG-NTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 129/310 (41%), Gaps = 25/310 (8%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ ++I + P+ +TF LI A++ +G L EA +Y+ MI+ P ++SL
Sbjct: 312 LLSNMIERKINPNVVTFSALIDAFVK---EGKLVEAEKLYDEMIK-RSIDPDIFTYSSLI 367
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK----ERIS 317
L +A+ +F L I KD + ++ ++ K E
Sbjct: 368 NGFCMHD------RLDEAKHMFE------LMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--ME 375
L +EM Q G ++++ + GD + A+K + +++ +G+P Y ++
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS--DGVPPDIITYSILLD 473
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
K G+ K+L +F +Q+ + Y+ +IE +CKA + E L G+KP
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ Y + + + G+ + F E E P+ Y + + G+ + E+
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELI 593
Query: 495 NHMHSDQTIG 504
M S +G
Sbjct: 594 KEMRSCGFVG 603
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 124/301 (41%), Gaps = 11/301 (3%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
LD+A ++ M+Q +P PS+ F L+S + K+ L I L I
Sbjct: 61 LDDAIGLFGEMVQ---SRPLPSIVE--FNKLLSAIAKMKKFDL----VISLGERMQNLRI 111
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
D+YS I ++ + + +M + G+E L S+L + DA
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 171
Query: 354 TWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
+++E T F + + +++ + +M +R + Y ++ LC
Sbjct: 172 LVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLC 231
Query: 414 KAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRT 472
K + +L SL+K+ + ++ + Y + + D F++ K RP+
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVF 291
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDL 532
Y + L N G A + ++M ++ I N + + ++ A++ G V+AEK+YD
Sbjct: 292 TYNSLISCLCNYGRWSDASRLLSNM-IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 533 M 533
M
Sbjct: 351 M 351
>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 143/350 (40%), Gaps = 18/350 (5%)
Query: 181 ALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSI 240
AL + D + K F R + D++ + S +I Y+ A G EA +
Sbjct: 140 ALYAAMIDLLAKHHHFPLARHLLDEMRERSIPVSSQVILAIIRRYVRA---GMSPEASEL 196
Query: 241 YNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ-QAEFIFHNLLTSGLEIQKDIYS 299
+ RM + G P P++ SL G LSK L +A+ +F + S +Y+
Sbjct: 197 FRRMEEYGAGVPDPAVLASLL-------GALSKKRLAGEAQALFDSY-KSVFPPDVVLYT 248
Query: 300 GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
L+ +DK EMQQAG SV+ + G V A++ +++
Sbjct: 249 TLVHAWCRAGCLDKAEQVF--AEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELLCQMM 306
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
E+ T F M A+ K G + L++ +M++ + Y+ ++E C ++
Sbjct: 307 ETGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSN 366
Query: 420 LTESL--MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGI 476
L ++ + + + G P ++ + + L G + + E +C+PN Y +
Sbjct: 367 LDAAMKVLAKMIAKGCIPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPNVVTYNL 426
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
++ +++ I M + Q + N + ++ ++ G++ +A
Sbjct: 427 LMKLFNKEKSMDMVLRIKKDMDA-QGVEPNVNTYGALIESFCGRGNWRRA 475
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 148/357 (41%), Gaps = 30/357 (8%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + E K + +++++ G P+ +TF+ LI ++S +G EA ++ M+
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS---EGNFKEALKMF-YMM 359
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF-----IFHNLLTSGLEIQKDIYSG 300
+ G P + L L + AEF + + +G+ + + Y+G
Sbjct: 360 EAKGLTPSEVSYGVLLDGLC-----------KNAEFDLARGFYMRMKRNGVCVGRITYTG 408
Query: 301 LIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
+I +D E + LL EM + G + +++ K G + A++ R+
Sbjct: 409 MIDGLCKNGFLD-EAVVLLN-EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 466
Query: 361 ---SDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
S NGI +Y ++G +++ I+ M + ++ ++ LCKA +
Sbjct: 467 VGLSPNGIIYSTLIYNC---CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-PNRTIYGI 476
E M+ G+ P S+ L N Y N G + F E + P YG
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
L+ L G++ +AE+ +H+ V+T N +L+A SG+ KA ++ M
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPA-AVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 639
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 134/315 (42%), Gaps = 17/315 (5%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ D + K K+ + + +F+++++QG P +TF LI +G + EA M+
Sbjct: 243 IIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCK---EGMVIEAKKFLETMM 299
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
L G P SL L A+ +F ++ + G E D+ S + ++
Sbjct: 300 -LRGIVPDLFTFTSLIEGFCLVGD------LDSAKELFLSMPSKGYE--PDVISYTVLIY 350
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
Y + E L EM + G + +L+ G V DA+K L + + +
Sbjct: 351 GYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKK--LFGVVKPHAV 408
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
P ++ ++ K G +++E+F E++ + +++ +I+ LCKA + E
Sbjct: 409 PKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWE 468
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLK 482
L ++ + G++P + +Y + N + G D ++ F E C PN Y L
Sbjct: 469 LFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFY 528
Query: 483 NAGNIEKAEEIFNHM 497
+E+ ++ + M
Sbjct: 529 KNNKLEEVVKLLHKM 543
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 149/358 (41%), Gaps = 32/358 (8%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + E K + +++++ G P+ +TF+ LI ++S +G EA ++ M+
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS---EGNFKEALKMF-YMM 359
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF-----IFHNLLTSGLEIQKDIYSG 300
+ G P + L L + AEF + + +G+ + + Y+G
Sbjct: 360 EAKGLTPSEVSYGVLLDGLC-----------KNAEFDLARGFYMRMKRNGVCVGRITYTG 408
Query: 301 LIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
+I +D E + LL EM + G + +++ K G + A++ R+
Sbjct: 409 MIDGLCKNGFLD-EAVVLLN-EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 466
Query: 361 ---SDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
S NGI +Y ++G +++ I+ M + ++ ++ LCKA +
Sbjct: 467 VGLSPNGIIYSTLIYNC---CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYG 475
E M+ G+ P S+ L N Y N G + F E + K P YG
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE-MTKVGHHPTFFTYG 582
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
L+ L G++ +AE+ +H+ V+T N +L+A SG+ KA ++ M
Sbjct: 583 SLLKGLCKGGHLREAEKFLKSLHAVPA-AVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 639
>gi|413944457|gb|AFW77106.1| hypothetical protein ZEAMMB73_510937 [Zea mays]
Length = 492
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 122/300 (40%), Gaps = 11/300 (3%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
++ +V+E M Q WY+ + KL +GK ++ K +F +I++G P+ ++
Sbjct: 122 DSALKVFELMRDQVWYKPHIGIYIKLITMLGKCKQPEKAHQLFQAMIDEGCAPNLQSYTA 181
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ Y + G EA + +RM G QP ++ L ++ L Y ++ +
Sbjct: 182 LVSTYSRS---GRFREAFDLLDRMKDTPGCQPDVQTYSILIKSC------LHAYDFEKVK 232
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ ++ +G+ Y+ LI + + +LLK M + + S LR
Sbjct: 233 SLLADMARAGIPPNTVTYNTLIDAYGKAGRFAEMESTLLK--MLSQNCKPDVWTMNSTLR 290
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
G +E E + + S + +++Y K + K + MQ+ S
Sbjct: 291 AFGSSGQIETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSW 350
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
++ Y+ +I+ +A + E E + + +KP + ++ Y G ++ A
Sbjct: 351 TIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTAL 410
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 125/295 (42%), Gaps = 15/295 (5%)
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQ 294
D A ++ M Y+P H ++ L++ G + ++A +F ++ G
Sbjct: 122 DSALKVFELMRDQVWYKP----HIGIYIKLITMLGKCKQ--PEKAHQLFQAMIDEGCAPN 175
Query: 295 KDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKT 354
Y+ L+ +S +E LL + G + + +++ C D E +
Sbjct: 176 LQSYTALVSTYSRSGRF-REAFDLLDRMKDTPGCQPDVQTYSILIKSCLHAYDFEKVKSL 234
Query: 355 WLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+ + GIP Y ++AY K G F + +M + V + +
Sbjct: 235 LADMARA--GIPPNTVTYNTLIDAYGKAGRFAEMESTLLKMLSQNCKPDVWTMNSTLRAF 292
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRT 472
+ + E ES ++F +G+ P + +Y L + Y M++++ A E ++K + T
Sbjct: 293 GSSGQIETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMG-AVMEYMQKYYYSWT 351
Query: 473 I--YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
I Y + +++ AG++E+ E IF M S++ I N + ++ AY +G+ K
Sbjct: 352 IVTYNVVIDAFGRAGDLEQMEYIFRLMKSER-IKPNCVTLCSVVRAYGRAGEVKK 405
>gi|17028291|gb|AAL34375.1|L43503_3 unknown [Lobochlamys segnis]
Length = 207
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 36/201 (17%)
Query: 555 NRKEVKK-PVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRY 613
N KE++ + L+ EQRE ++G LLG +E+ + + R ++ + H +
Sbjct: 3 NTKEIRNMKEDIELTEEQREIIVGTLLGDCHLETQNNGQTY--RLLVEQSKKQHGPFVMH 60
Query: 614 LYDQYHEWLHP---------SFK-------------FWPKGRLVIPKLIHRWLTPRALAY 651
LY+++ + SFK F+ +G+ V+PK IH++LT R+LAY
Sbjct: 61 LYEKFKPLVRTPPVEKKNNLSFKTLSIGPLRYYGQIFYQEGKKVVPKNIHKYLTDRSLAY 120
Query: 652 WFMYGGH---RTSVGDILLKLKVSSEGIALVFKTLKARSLDCRVKKKGRVF--------W 700
W+M G + G + + E + + L ++ +D V + R++
Sbjct: 121 WYMDDGALKGKDRSGKRIHTESFTKEEVYTLRDILISKGIDTSVNAQNRIYKGVNKCYHI 180
Query: 701 IGFLGSNSTLFWKLIEPYVLD 721
+ S +F + I PYV+D
Sbjct: 181 LYITASGDKMFTERIRPYVID 201
>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 167/402 (41%), Gaps = 19/402 (4%)
Query: 136 NAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERK 195
N + K++ E L R R+ + ++ QQ + + A + L D + + +K
Sbjct: 48 NPKTKFISHESAVSLM---KRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKK 104
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS 255
F I + + E F L+ + + + D+ ++N + + +P +
Sbjct: 105 FLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLH---DKVMEMFNLIQVIARVKPSLN 161
Query: 256 LHNSLFRALV-SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
++ L+ S LS+ L A+ HNL GL+ I++ L+ H +I+
Sbjct: 162 AISTCLNLLIDSGEVNLSRKLLLYAK---HNL---GLQPNTCIFNILVKHHCKNGDINFA 215
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCA-KEGDVEDAEKTWLRLLESDNGIPTPA-FVY 372
L+ +EM+++G + S L C ++A + + ++ + P P F
Sbjct: 216 --FLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNV 273
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
+ + + GE ++ +I M++ + +V Y ++ CK + + + E +TG
Sbjct: 274 MINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTG 333
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAE 491
+K Y L N + G D E +CR + Y + L L + G E+A
Sbjct: 334 LKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEAL 393
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++ + S + + +N S IIL+A +G+ KA K +M
Sbjct: 394 QMLDQWGS-EGVHLNKGSYRIILNALCCNGELEKAVKFLSVM 434
>gi|334187522|ref|NP_196448.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635617|sp|P0C8Q6.1|PP368_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial; Flags: Precursor
gi|332003898|gb|AED91281.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 832
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 127/313 (40%), Gaps = 23/313 (7%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
+ + W +Q YR D +A + + R+ A + + D++N S F I
Sbjct: 89 AYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFI 148
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
+A G +DEA S+++R+ ++G P +N L A +SK S ++ E
Sbjct: 149 RCLGNA---GLVDEASSVFDRVREMGLCVPNAYTYNCLLEA-ISKSNSSS---VELVEAR 201
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
+ G K + + L Y + ER + E+ G+ + + V+ C
Sbjct: 202 LKEMRDCGFHFDKFTLTPV--LQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFC 259
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
K G V+ A + L E D + + + + K K+ ++F +M+ +A +
Sbjct: 260 -KWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADI 318
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
Y +I LCK ++ E+ SL E +G+ P + G+ +L +FSE
Sbjct: 319 ALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPP-------------DRGILGKLLCSFSE 365
Query: 463 CLEKCRPNRTIYG 475
E R I G
Sbjct: 366 ESELSRITEVIIG 378
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 113/260 (43%), Gaps = 36/260 (13%)
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
N+ +P + I+I + A +D A ++ + ++Q G P P ++N++ + +
Sbjct: 432 NKAILPDSDSLSIVINCLVKANK---VDMAVTLLHDIVQ-NGLIPGPMMYNNIIEGMCKE 487
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQK----DIYSGLIWLHSYQDNIDKERISLLKKEM 323
G S+ L+ + + +G+E + IY L + +D L K+M
Sbjct: 488 --GRSEESLK----LLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALD------LLKKM 535
Query: 324 QQAGFEE-GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEA-YAKIG 381
+ GFE K V ++C + G DA K + + F+ M A A I
Sbjct: 536 RFYGFEPWIKHTTFLVKKLC-ENGRAVDACKYL-------DDVAGEGFLGHMVASTAAID 587
Query: 382 EFMKS------LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+K+ LE+FR++ V AYH +I+ LCKA T + L E V G+KP
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP 647
Query: 436 LMPSYINLTNMYLNLGMHDR 455
+ +Y ++ + + G DR
Sbjct: 648 TVATYNSMIDGWCKEGEIDR 667
>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
[Oryza sativa Japonica Group]
Length = 580
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 6/211 (2%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAK 379
+M +AG V ++L VC K GD AE R+ G+P F + + Y +
Sbjct: 170 QMTRAGVAMNTHVYNAMLHVCLKAGDAALAESLMTRM--DAAGVPLDRFSFNTVIALYCR 227
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
G +++ + M+ + A V ++ +I LCK + L++E G+ P +
Sbjct: 228 KGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVT 287
Query: 440 YINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
Y L + Y G + + + L P Y L L G +++ + N M
Sbjct: 288 YTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEM- 346
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
++ + + +CN +++AY GD A K+
Sbjct: 347 DERKVQADHVTCNTLINAYCKRGDMTSALKV 377
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 105/273 (38%), Gaps = 18/273 (6%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+++A + + +G+ Y+ L+ Y D E L+ EM+ G G
Sbjct: 266 VKEASQLLREMAMAGVAPDHVTYTTLV--DGYCRAGDLEEAVKLRGEMEAMGMLPGVATY 323
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
++LR ++G +++ + E + AY K G+ +L++ R M E
Sbjct: 324 NAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMME 383
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP-------LMPSYINLTNMYL 448
Y ++ CKA+E + + + E + G P ++ N N
Sbjct: 384 SGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVA 443
Query: 449 NLGMHDRL-HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
L + D L F P++ +Y + L G I+ A +FN M + + +
Sbjct: 444 VLAIPDELMKRGFP-------PDKAVYRSLIRRLCKKGFIDLAGNVFNEMQG-KGLEADC 495
Query: 508 RSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEI 540
+ AYL++G V A I + M K+ I
Sbjct: 496 LVYATLACAYLTAGKPVAALDILNEMAKKQLYI 528
>gi|162460162|ref|NP_001106062.1| pentatricopeptide repeat 5 [Zea mays]
gi|154520281|gb|ABS82814.1| pentatricopeptide repeat protein 5 [Zea mays]
gi|413924537|gb|AFW64469.1| pentatricopeptide repeat 5 [Zea mays]
Length = 499
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 154/410 (37%), Gaps = 95/410 (23%)
Query: 131 LVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFR--------VYEWMMQQHWYRFDFAL 182
LV +L+ + +R E HC + E E G R V+ WM +Q WY D +
Sbjct: 75 LVPVLDRHVRVVRTE-------HCFLLFE-ELGRRDAWLQCLDVFRWMQKQRWYVADNGI 126
Query: 183 ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYL-SAPVQGCLDEACSIY 241
+KL MG++ + +F + N G P ++ LI A+L S L +A +
Sbjct: 127 YSKLISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKTKALAKALGYF 186
Query: 242 NRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
+M + QP +N L RA G +K Q + +F +L S + Y+G
Sbjct: 187 EKMKCIERCQPTIVTYNILLRAFAQ--AGDTK----QVDMLFKDLDESVVSPDVYTYNG- 239
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
VL K G +++ E +R+ +
Sbjct: 240 ------------------------------------VLDAYGKNGMIKEMESVLVRMKST 263
Query: 362 DNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
F +++Y + F K ++F+ + + P ++ +I +A E
Sbjct: 264 QCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKA 323
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESL 481
ES++++ E G KP + L MY A +C
Sbjct: 324 ESVVEKMEELGFKPNYVTQECLIIMY-----------AHCDC------------------ 354
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
+ KA ++F+ + + QT V+ S N +L AY +G +A+++ D
Sbjct: 355 -----VSKARQVFDELVTSQT-KVHLSSLNSMLEAYCMNGLHTEADRLLD 398
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 160/382 (41%), Gaps = 20/382 (5%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M++ + + + D + K+R + D F +++ +G P T+ ++ + +
Sbjct: 71 MEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNL-- 128
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSL-FRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
G ++EA S++ +M++ R + N + F L+ G K + +A +F +
Sbjct: 129 -GRVNEATSLFKQMVE------RNVIPNKVTFTILID--GLCKKRMISEAWLVFETMTEK 179
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
GLE Y+ L+ + + +D+ + L M + G ++ K G ++
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQ--KLFNIMDRKGCAPNVRSYNILINGHCKSGRID 237
Query: 350 DAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
+A+ + S + F Y M + ++G ++ E+ +EM ++ Y
Sbjct: 238 EAKGLLAEM--SHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSI 295
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK- 466
+++ LCK + L+K E+ ++P + Y L G + FS K
Sbjct: 296 VLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKG 355
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
+P Y + + L G +A E+F M + + N+ + N+I+ +L +GD A
Sbjct: 356 IQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLP-NSCTYNVIIQGFLRNGDTPNA 414
Query: 527 EKIYDLMCLKKYEIESAWMEKL 548
++ + M K + +S+ L
Sbjct: 415 VRLIEEMVGKGFSADSSTFRML 436
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 95/194 (48%), Gaps = 3/194 (1%)
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
+C+K + DA K + +++ + + + K+G +L++ ++M+E+
Sbjct: 20 LCSK-AKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKP 78
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
+V AY+ II+ LCK E V+ G+ P + +Y ++ + + NLG + F
Sbjct: 79 NVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLF 138
Query: 461 SECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
+ +E+ PN+ + I ++ L I +A +F M +++ + + + N ++ Y S
Sbjct: 139 KQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETM-TEKGLEPDVYTYNALVDGYCS 197
Query: 520 SGDFVKAEKIYDLM 533
+A+K++++M
Sbjct: 198 RSQMDEAQKLFNIM 211
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 167/392 (42%), Gaps = 83/392 (21%)
Query: 175 WYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCL 234
W + F T L + K++K + +FD +I+ +P+E+TF+++I Y + G +
Sbjct: 476 WNNYTF---TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYC---LVGNI 529
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK---PGGLSKYY-----LQQAEFIFHNL 286
+A +Y++M+++G +P N +R+L+S G+SK L+ + + +N
Sbjct: 530 RKAFQLYDQMVEMG-LKP----DNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNF 584
Query: 287 LTSGL-----------------------EIQKDIYSGLIWLHSYQDNIDKERISLLKKEM 323
+ L ++ D+ S I +++ DKE+ +L +EM
Sbjct: 585 SLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 644
Query: 324 QQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL------------------------- 358
++ G + ++ +KE ++ A W ++
Sbjct: 645 KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYL 704
Query: 359 ---------LESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM-QERLGSASVPAYH 406
+ + N +P F Y ++ +A G+ K+ ++ M Q L AS+ +++
Sbjct: 705 GSAELLCKEMLAGNVLPN-KFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL--ASIVSFN 761
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK 466
+I+ LCKA + + LM + E+G P SY + + +G ++ ++E L K
Sbjct: 762 ILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 821
Query: 467 -CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+P+ Y I++ G +KA I+ +M
Sbjct: 822 GLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 853
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 143/357 (40%), Gaps = 24/357 (6%)
Query: 183 ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYN 242
A+++ + K R+FA RD+FD ++ G E + I AY + LD A +
Sbjct: 166 ASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRN---LDGARGLVV 222
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
RM + G + +N L L +Q+A + + ++ G+ + Y L+
Sbjct: 223 RM-ESEGVKASAVPYNVLMYGLCKN------MRVQEAVEVKNVMVNIGVTADEVTYRTLV 275
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGF---EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
+ + + E + +M + GF E ++ LR K+ VE+A +L
Sbjct: 276 YGFCRMEEL--EMALRITHDMIRLGFVPSEANCSFMIDELR---KKELVEEAFSLACKL- 329
Query: 360 ESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
D G+ F Y ++ K F + +F+EM R + Y +I LCK
Sbjct: 330 -GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM 388
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGI 476
E L + + G+K + Y +L N Y G DR S + E P Y
Sbjct: 389 IEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSP 448
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ L G++ E+ M +++ I N + +++ + +A +++D M
Sbjct: 449 LIAGLCRNGDLSSCMELHREM-AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM 504
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 74/182 (40%), Gaps = 5/182 (2%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEA 376
L KEM G E + ++ K G +EDA + ++ D GI + Y +
Sbjct: 360 LFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKM--RDKGIKVTVYPYNSLING 417
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
Y K G ++ + M + + + +Y +I LC+ + L +E E G+
Sbjct: 418 YCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWN 477
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
++ L N + D F + ++ PN + + +E GNI KA ++++
Sbjct: 478 NYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYD 537
Query: 496 HM 497
M
Sbjct: 538 QM 539
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 108/260 (41%), Gaps = 18/260 (6%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ QG P ++ F+ ++ LS + + +A + +++M+ + GY P H L
Sbjct: 640 LFREMKEQGVKPDDI-FYTCMIDALSK--EENMIQALNCWDQMV-VDGYSPNTVTHTVLI 695
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L K G YL AE + +L + K Y+ +L + D E+ L
Sbjct: 696 NNLC-KSG-----YLGSAELLCKEMLAGNVLPNKFTYN--CFLDYFATEGDMEKAKDLHS 747
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
M Q + + +C K G +++A ++ ES ++ + K+G
Sbjct: 748 AMLQGHLASIVSFNILIKGLC-KAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMG 806
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ K+ E++ EM + V AY+ I E++ + + +G++P +Y
Sbjct: 807 DINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYR 866
Query: 442 NLTNMYLNLGMHDRLHLAFS 461
L + G+ LH FS
Sbjct: 867 ALLS-----GISLMLHYDFS 881
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 11/257 (4%)
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE--GKEVLLSVLR 340
F LL +GL + I S L+ D+ LL + + + +LL L
Sbjct: 136 FGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLC 195
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKSLEIFREMQERL 397
K G +D LR++ + +P A+ ++ + K G+ K+ ++F+EM +R
Sbjct: 196 NQGKSGQADD----LLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 251
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
+ Y ++ LCKA + E+ +++ V G+ P +Y NL Y + G
Sbjct: 252 IPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAV 311
Query: 458 LAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F E + P+ + SL G I++A ++F+ M + + + S I+L+
Sbjct: 312 RVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTM-AMKGQNPDVFSYTIMLNG 370
Query: 517 YLSSGDFVKAEKIYDLM 533
Y + G V ++DLM
Sbjct: 371 YATKGCLVDMTDLFDLM 387
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 155/368 (42%), Gaps = 25/368 (6%)
Query: 165 RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
RV++ M +Q AL T L + K K + RD+FD + +G+ P ++ I++
Sbjct: 312 RVFKEMRRQSILPDVVALNT-LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNG 370
Query: 225 YLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
Y + +GCL + +++ M+ G P N L +A + G+ L +A IF+
Sbjct: 371 YAT---KGCLVDMTDLFDLMLG-DGIAPVICTFNVLIKAYAN--CGM----LDKAMIIFN 420
Query: 285 NLLTSGLEIQKDIY----SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ G++ Y + L + D ++K +M G K +++
Sbjct: 421 EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK------FNQMIDQGVVPDKYAYHCLIQ 474
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-S 399
G + A++ ++ + + F + K+G M + IF ++ +G
Sbjct: 475 GFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF-DLTVNVGLH 533
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
Y+ +++ C + E + V G++P + Y L N Y +G D
Sbjct: 534 PDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSL 593
Query: 460 FSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
F E L+K +P+ +Y I ++ L AG A+ F+ M ++ I +N + +I+L
Sbjct: 594 FREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM-TESGIAMNKCTYSIVLRGLF 652
Query: 519 SSGDFVKA 526
+ F +A
Sbjct: 653 KNRCFDEA 660
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 69/362 (19%), Positives = 137/362 (37%), Gaps = 59/362 (16%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P + ++ +I + +G +++AC ++ M+Q G P ++S+ AL
Sbjct: 219 PDVVAYNTVIDGFFK---EGDVNKACDLFKEMVQR-GIPPDLVTYSSVVHALCKARA--- 271
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ +AE ++ G+ Y+ LI+ +S KE + + KEM++
Sbjct: 272 ---MDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQW-KEAVRVF-KEMRRQSILPDV 326
Query: 333 EVLLSVLRVCAKEGDVEDAEKTW----------------------------------LRL 358
L +++ K G +++A + L
Sbjct: 327 VALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDL 386
Query: 359 LESDNGIPT-PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
+ D P F ++AYA G K++ IF EM++ V Y +I LC+ +
Sbjct: 387 MLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 446
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGI 476
+ + ++ G+ P +Y L + G + SE + R + +G
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 506
Query: 477 YLESLKNAGNIEKAEEIFN-----HMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
+ +L G + A+ IF+ +H D + N+++ Y G KA +++D
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY------NMLMDGYCLVGKMEKALRVFD 560
Query: 532 LM 533
M
Sbjct: 561 AM 562
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 11/257 (4%)
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE--GKEVLLSVLR 340
F LL +GL + I S L+ D+ LL + + + +LL L
Sbjct: 136 FGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLC 195
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKSLEIFREMQERL 397
K G +D LR++ + +P A+ ++ + K G+ K+ ++F+EM +R
Sbjct: 196 NQGKSGQADD----LLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 251
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
+ Y ++ LCKA + E+ +++ V G+ P +Y NL Y + G
Sbjct: 252 IPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAV 311
Query: 458 LAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F E + P+ + SL G I++A ++F+ M + + + S I+L+
Sbjct: 312 RVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTM-AMKGQNPDVFSYTIMLNG 370
Query: 517 YLSSGDFVKAEKIYDLM 533
Y + G V ++DLM
Sbjct: 371 YATKGCLVDMTDLFDLM 387
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 139/333 (41%), Gaps = 18/333 (5%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
D+FD ++ G P TF++LI AY + G LD+A I+N M + G +P + ++
Sbjct: 382 DLFDLMLGDGIAPDIYTFNVLIKAYANC---GMLDKAMIIFNEM-RDHGVKPHVVTYMTV 437
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
AL + K + A F+ ++ G+ K Y LI ++ K + L
Sbjct: 438 IAALCR----IGK--MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAK--ELI 489
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
E+ G S++ K G V DA+ + L + G+ A VY M+ Y
Sbjct: 490 SEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF--DLTVNVGLHPDAVVYNMLMDGYC 547
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
+G+ K+L +F M +V Y ++ CK + SL +E ++ G+KP
Sbjct: 548 LVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI 607
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
Y + + G + F E E N+ Y I L L ++A +F +
Sbjct: 608 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL 667
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+ + ++ + N +++ + +A+ ++
Sbjct: 668 RA-MNVKIDIITLNTMIAGMFQTRRVEEAKDLF 699
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 155/368 (42%), Gaps = 25/368 (6%)
Query: 165 RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
RV++ M +Q AL T L + K K + RD+FD + +G+ P ++ I++
Sbjct: 312 RVFKEMRRQSILPDVVALNT-LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNG 370
Query: 225 YLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
Y + +GCL + +++ M+ G P N L +A + G+ L +A IF+
Sbjct: 371 YAT---KGCLVDMTDLFDLMLG-DGIAPDIYTFNVLIKAYAN--CGM----LDKAMIIFN 420
Query: 285 NLLTSGLEIQKDIY----SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ G++ Y + L + D ++K +M G K +++
Sbjct: 421 EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK------FNQMIDQGVVPDKYAYHCLIQ 474
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-S 399
G + A++ ++ + + F + K+G M + IF ++ +G
Sbjct: 475 GFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF-DLTVNVGLH 533
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
Y+ +++ C + E + V G++P + Y L N Y +G D
Sbjct: 534 PDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSL 593
Query: 460 FSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
F E L+K +P+ +Y I ++ L AG A+ F+ M ++ I +N + +I+L
Sbjct: 594 FREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM-TESGIAMNKCTYSIVLRGLF 652
Query: 519 SSGDFVKA 526
+ F +A
Sbjct: 653 KNRCFDEA 660
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 70/362 (19%), Positives = 140/362 (38%), Gaps = 59/362 (16%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P + ++ +I + +G +++AC ++ M+Q G P ++S+ AL
Sbjct: 219 PDVVAYNTVIDGFFK---EGDVNKACDLFKEMVQR-GIPPDLVTYSSVVHALCKARA--- 271
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ +AE ++ G+ Y+ LI+ +S KE + + KEM++
Sbjct: 272 ---MDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQW-KEAVRVF-KEMRRQSILPDV 326
Query: 333 EVLLSVLRVCAKEGDVEDA---------------------------------EKTWLRLL 359
L +++ K G +++A + T L L
Sbjct: 327 VALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDL 386
Query: 360 ESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
+GI + + ++AYA G K++ IF EM++ V Y +I LC+ +
Sbjct: 387 MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 446
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGI 476
+ + ++ G+ P +Y L + G + SE + R + +G
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 506
Query: 477 YLESLKNAGNIEKAEEIFN-----HMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
+ +L G + A+ IF+ +H D + N+++ Y G KA +++D
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY------NMLMDGYCLVGKMEKALRVFD 560
Query: 532 LM 533
M
Sbjct: 561 AM 562
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 16/226 (7%)
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
+ I ++ ++M++ GFE +L+ K V+ A+K + + S+ G A Y
Sbjct: 163 QMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEM--SNKGCCPDAVSYT 220
Query: 374 --MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
+ + ++G + RE+ ER V Y+ +I LCK + + LM+E VE
Sbjct: 221 TVISSMCEVGLVKEG----RELAERF-EPVVSVYNALINGLCKEHDYKGAFELMREMVEK 275
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAFS---ECLEK-CRPNRTIYGIYLESLKNAGNI 487
G+ P + SY L N+ N G ++ LAFS + L++ C PN ++ G
Sbjct: 276 GISPNVISYSTLINVLCNSG---QIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTT 332
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A +++N M + N + N ++ + S G+ VKA ++ M
Sbjct: 333 FDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHM 378
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 71/365 (19%), Positives = 149/365 (40%), Gaps = 24/365 (6%)
Query: 177 RFD--FALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCL 234
RF+ ++ L + + KE + ++ +++ +G P+ +++ LI ++ G +
Sbjct: 241 RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNS---GQI 297
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQ 294
+ A S +M++ G + P +SL + + L N + G +Q
Sbjct: 298 ELAFSFLTQMLKRGCH-PNIYTLSSLVKGCFLRGTTFDALDLW-------NQMIRGFGLQ 349
Query: 295 KDI--YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
++ Y+ L+ NI K +S+ M++ G S++ AK G ++ A
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVKA-VSVFS-HMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 353 KTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
W ++L S + +EA + +F ++ + M + + SVP ++ I+ L
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE----KCR 468
C A + E + ++ + P P+ + + L +R+ A+ E
Sbjct: 468 CDAGRLDWAEKVFRQMEQQHRCP--PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
+ + Y L NAG A ++ M D + + N+I+ AY G +A +
Sbjct: 526 WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGK-SPDEITMNMIILAYCKQGKAERAAQ 584
Query: 529 IYDLM 533
+ DL+
Sbjct: 585 MLDLV 589
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 145/336 (43%), Gaps = 52/336 (15%)
Query: 197 AKCRDIFDDIINQGRVPSEMTFHILIVAYL-SAPVQGCLDEACSIYNRMIQLGGYQPRPS 255
+K +++ + G P+ +T++ L+ +Y VQ LD + R G P
Sbjct: 522 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRR-----GCAPNDV 576
Query: 256 LHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER 315
+N L L SK G +QA+ + +L +GL++ Y+ LI+ + + + E
Sbjct: 577 TYNVLINGL-SKKGEF-----EQAKGLIGEMLKTGLKVSAYTYNPLIYGY-FNKGLLAEA 629
Query: 316 ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKM 374
+SL ++EM G S + K G + DA + +L ++N +P ++ +
Sbjct: 630 LSL-QEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDML-ANNLLPDVVSYNTLI 687
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
Y ++G MK+ +F E++ ++ Y+ +++ LC+ E E+ + L E + G+
Sbjct: 688 YGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 747
Query: 435 PLMPSYINLTNMYLNLG------------MHDRLHL--------------------AFS- 461
P + +Y L N +G +H+ L L AFS
Sbjct: 748 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 807
Query: 462 --ECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
E L K P+ IY + ++ L GN+E+A E+
Sbjct: 808 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELL 843
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 169/423 (39%), Gaps = 38/423 (8%)
Query: 131 LVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFR--------VYEWMMQQHWYRFDFAL 182
VR+L++ + R +A+ R E++ GFR + E + Q + R
Sbjct: 390 FVRVLSSFRTSPR------MALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMR----- 438
Query: 183 ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYN 242
+ Y ER D++ G V SE++ IL + + +++ S+++
Sbjct: 439 ----SAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFD 494
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
+MI+ P N + R L K + +A ++ + G++ Y+ L
Sbjct: 495 KMIK-SRLSPDVKNCNRILRILRDKD------LMSKAVEVYRTMGEFGIKPTIVTYNTL- 546
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
L SY ++ L EMQ+ G ++ +K+G+ E A+ +L++
Sbjct: 547 -LDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKT- 604
Query: 363 NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
G+ A+ Y + Y G ++L + EM + S +V Y+ I LCK
Sbjct: 605 -GLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSD 663
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLE 479
+ + + + P + SY L Y LG + L F E P Y L+
Sbjct: 664 AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLD 723
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
L G +E A+++ M ++ I + + I+++ G A++ +D M + E
Sbjct: 724 GLCRQGELEVAQQLKVEM-INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLE 782
Query: 540 IES 542
++S
Sbjct: 783 LDS 785
>gi|358348674|ref|XP_003638369.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355504304|gb|AES85507.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 501
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 162/394 (41%), Gaps = 37/394 (9%)
Query: 121 KELPSHKGGTLVR-ILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFD 179
+EL G LVR +L K + E+ T C ++ ++ + W QQ YR
Sbjct: 110 EELGIRPSGILVREVLFGILKNINSENKT----RCAKL-----AYKFFVWCGQQEDYRHT 160
Query: 180 FALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACS 239
+ + + ++F + D++I +G + TF+ILI A + L E
Sbjct: 161 ANAYHLIMNIYAECKEFKALWRLVDEMIGKGYKATARTFNILIRTCGEAGLAKTLVE--- 217
Query: 240 IYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYS 299
R I+ + RP H+ + A++ L++Y L E+++ +L G DI +
Sbjct: 218 ---RFIKSKSFNYRPFKHS--YNAILHSFLVLNQYKL--IEWVYEQMLLDG-GFSSDILT 269
Query: 300 GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK----EGDV------- 348
I +++ +++ L EM + GF +L +K +GD+
Sbjct: 270 YNIVIYAKYRLGKVDQVLTLLGEMDRNGFSPDFHTYNILLHAISKGDIGKGDLDKEDLGK 329
Query: 349 EDAEKTWLRLLE--SDNGI-PTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
E + L+LL + GI PT F ++ +++ G+ F EM++ V A
Sbjct: 330 EKEQFKALKLLNYMRETGIEPTVLHFTTLIDGFSRAGKLDACQYFFNEMKKNGCMPDVVA 389
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
Y +I A E E + + +E + + P + +Y ++ G D F E
Sbjct: 390 YTVMITGYVVARELEKAQEMFEEMLSKELVPNVFTYNSMIRGLCMAGKFDEACSMFKEME 449
Query: 465 EK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
K C PN +Y + L+NAG + A E+ M
Sbjct: 450 RKGCSPNSVVYITLVSCLRNAGRVADAREVIKQM 483
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 362 DNGIPTPAFVYKMEAYAK--IGEFMKSLEIFREMQERLGSASVPAYHKII---------- 409
D G + Y + YAK +G+ + L + EM S Y+ ++
Sbjct: 260 DGGFSSDILTYNIVIYAKYRLGKVDQVLTLLGEMDRNGFSPDFHTYNILLHAISKGDIGK 319
Query: 410 -----ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
E L K +E L+ ETG++P + + L + + G D F+E
Sbjct: 320 GDLDKEDLGKEKEQFKALKLLNYMRETGIEPTVLHFTTLIDGFSRAGKLDACQYFFNEMK 379
Query: 465 EK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
+ C P+ Y + + A +EKA+E+F M S + + N + N ++ +G F
Sbjct: 380 KNGCMPDVVAYTVMITGYVVARELEKAQEMFEEMLSKELVP-NVFTYNSMIRGLCMAGKF 438
Query: 524 VKAEKIYDLM 533
+A ++ M
Sbjct: 439 DEACSMFKEM 448
>gi|414591646|tpg|DAA42217.1| TPA: hypothetical protein ZEAMMB73_097907 [Zea mays]
Length = 476
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 112/260 (43%), Gaps = 17/260 (6%)
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE--GKEVLLSVLR 340
F LL +GL + I + L+ D+ LL + + + +LL L
Sbjct: 134 FGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVSSYNILLKSLC 193
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKSLEIFREMQERL 397
K G +D LR++ + +P A+ ++ + K G+ K+ ++F+EM +R
Sbjct: 194 NQGKSGQADD----LLRMMAEGGAVCSPDVVAYTTVIDGFFKEGDVNKACDLFKEMVQRG 249
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
Y ++ LCKA + E+ +++ V G+ P +Y NL Y + G
Sbjct: 250 IPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAV 309
Query: 458 LAFSECLEKCRPNRTIYGIYLESLKNA----GNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
F E R N + + L +L + G I++A ++F+ M + + N S I+
Sbjct: 310 RVFKEMR---RHNILLDVVNLNTLMGSLCKYGKIKEARDVFDTM-AMKGQNPNVFSYTIM 365
Query: 514 LSAYLSSGDFVKAEKIYDLM 533
L+ Y + G V ++DLM
Sbjct: 366 LNGYATKGCLVDMTDLFDLM 385
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 133/304 (43%), Gaps = 29/304 (9%)
Query: 144 QEDG------TYLAV---HCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKER 194
QEDG TY V HC R + F++++ M ++ + L + +E
Sbjct: 260 QEDGVFPNLYTYNCVMNQHCKDGRTKD-AFKLFDEM-RERGVSCNIVTYNTLIGGLCREM 317
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
K + + D + + G P+ +T++ LI + G L +A S+ R ++ G P
Sbjct: 318 KANEANKVMDQMKSDGINPNLITYNTLIDGFCGV---GKLGKALSLC-RDLKSRGLSPSL 373
Query: 255 SLHNSLFRALVSK--PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+N L K G K + E G++ K Y+ LI + DN+
Sbjct: 374 VTYNILVSGFCKKGDTSGAGKVVKEMEE--------RGIKPSKITYTILIDTFARMDNM- 424
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
E+ L+ M++ G ++ +G + +A + + +L+ + P
Sbjct: 425 -EKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLF-KLMVAKKLEPNKVIYN 482
Query: 373 KME-AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
M Y K G ++L +FREM+E+ +V +Y +IE+LCK +++ E L+++ ++T
Sbjct: 483 TMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDT 542
Query: 432 GMKP 435
G+ P
Sbjct: 543 GIDP 546
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 155/397 (39%), Gaps = 93/397 (23%)
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
+ ++I AY+ + LD + S +N M+ G+ P + N+L +V S + Q
Sbjct: 97 YEVMINAYVQSQ---SLDSSISYFNEMVD-KGFVPGSNCFNNLLTFVVG-----SSSFNQ 147
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
F S +++ D+YS I + + + E+ L E+++ GF + +
Sbjct: 148 WWRFFNE----SKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTT 203
Query: 338 VLRVCAKEGDVEDA---------------EKTWLRLLES--DNGIPTPAF-VYK------ 373
++ C K G++E A E T+ L+ NGI F +Y+
Sbjct: 204 LIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDG 263
Query: 374 -----------MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
M + K G + ++F EM+ER S ++ Y+ +I LC+ +
Sbjct: 264 VFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEAN 323
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE----------------- 465
+M + G+ P + +Y L + + +G +L A S C +
Sbjct: 324 KVMDQMKSDGINPNLITYNTLIDGFCGVG---KLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 466 ----------------------KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS-DQT 502
+P++ Y I +++ N+EKA ++ + M T
Sbjct: 381 SGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLT 440
Query: 503 IGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
V+T S +++ + G +A +++ LM KK E
Sbjct: 441 PDVHTYS--VLIHGFCIKGQMNEASRLFKLMVAKKLE 475
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 72/366 (19%), Positives = 144/366 (39%), Gaps = 53/366 (14%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
+++ + + + T L D K + K +D+F ++ G V +E T+ +LI
Sbjct: 189 LREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLI-------- 240
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+ LF+ + K G Y Q + +F NL T
Sbjct: 241 ---------------------------HGLFKNGIKKQG-FEMYEKMQEDGVFPNLYT-- 270
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
Y+ ++ H +D K+ L EM++ G +++ +E +
Sbjct: 271 -------YNCVMNQHC-KDGRTKDAFKLFD-EMRERGVSCNIVTYNTLIGGLCREMKANE 321
Query: 351 AEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
A K + ++SD GI Y ++ + +G+ K+L + R+++ R S S+ Y+ +
Sbjct: 322 ANKV-MDQMKSD-GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL-GMHDRLHLAFSECLEKC 467
+ CK +T ++KE E G+KP +Y L + + + M + L
Sbjct: 380 VSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGL 439
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
P+ Y + + G + +A +F M + + + N N ++ Y G +A
Sbjct: 440 TPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKK-LEPNKVIYNTMVLGYCKEGSSYRAL 498
Query: 528 KIYDLM 533
+++ M
Sbjct: 499 RLFREM 504
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 156/414 (37%), Gaps = 68/414 (16%)
Query: 174 HWYRFDFALA-----------------TKLADYMGKERKFAKCRDIFDDIINQGRVPSEM 216
H R DFA + T L + E K + +FD +I +G P+ +
Sbjct: 117 HLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVV 176
Query: 217 TFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYL 276
T+ LI G A + M Q G QP + ++L +L +
Sbjct: 177 TYGTLINGLCKV---GNTSAAIRLLRSMEQ-GNCQPNVVVFSTLIDSLCKD------RQV 226
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
+A IF ++T G+ Y+ LI H + + ++ L EM + L
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLI--HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLN 284
Query: 337 SVLRVCAKEG-----------------------------------DVEDAEKTWLRLLES 361
+V+ KEG +V+ A K + ++
Sbjct: 285 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344
Query: 362 DNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
D ++ + Y KI K++ +F EM + + + Y+ +I LC +
Sbjct: 345 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 404
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGIYLE 479
SL E V G P + +Y L++ YL H +A + +E P+ IY L+
Sbjct: 405 ISLFHEMVARGQIPDLVTYRTLSD-YLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILD 463
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ AG +E A ++F+++ S + + N + NI++ G +A K++ M
Sbjct: 464 GMCRAGELEDARDLFSNL-SSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 63/330 (19%), Positives = 134/330 (40%), Gaps = 35/330 (10%)
Query: 214 SEMTFHILIVAYLSAPVQ-GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
S TFH S P+ LDEA S +NRM+ QP PS + +
Sbjct: 37 SHNTFH-------SKPLHFNTLDEALSTFNRMLH---KQPPPSTVD------------FN 74
Query: 273 KYYLQQAEFIFHNLLTS------GLEIQKDIYSGLIWLHS--YQDNIDKERISLLKKEMQ 324
+ A+ H+ L S I D+Y+ I ++S + + +D +L K +
Sbjct: 75 RLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAK--IL 132
Query: 325 QAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFM 384
+ G + +++R EG + +A + +++ + + K+G
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192
Query: 385 KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT 444
++ + R M++ +V + +I+ LCK + ++ E + G+ P + +Y +L
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 252
Query: 445 NMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
+ L + +E ++ K P+ +++L G + +A ++ + M + +
Sbjct: 253 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVD-MMIHRGV 311
Query: 504 GVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
N + N ++ + + A K++D M
Sbjct: 312 EPNVVTYNALMDGHCLRNEVDVAVKVFDTM 341
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 164/413 (39%), Gaps = 72/413 (17%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D T + + K K + R++F++++ +G P E+T+ LI Y A G + EA
Sbjct: 381 DIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKA---GEMKEAF 437
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
S++N+M+Q G P + +L L K G + A + H + GL+ Y
Sbjct: 438 SVHNQMVQ-KGLTPNVVTYTALADGL-CKNGEI-----DVANELLHEMSRKGLQPNVYTY 490
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+ ++ NI E+ L +EM AGF
Sbjct: 491 NTIVNGLCKIGNI--EQTVKLMEEMDLAGFYPD--------------------------- 521
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
T + M+AY K+GE K+ E+ R M + ++ ++ ++ C +
Sbjct: 522 --------TITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGML 573
Query: 419 ELTESLMKEFVETGMKP-------LMPSYINLTNMYLNL----GMHDRLHLAFSECLEKC 467
E E L++ +E G+ P LM Y NM MHDR
Sbjct: 574 EDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDR----------GV 623
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
P+ Y I ++ A N+++A + M ++ V + + ++ + FV+A
Sbjct: 624 MPDSNTYNILIKGHCKARNMKEAWFLHKEM-VEKGYSVTAATYDALIRGFYKRKKFVEAR 682
Query: 528 KIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIGLLL 580
K+++ M +K+ + A + D + +N +E ++L L E L G +
Sbjct: 683 KLFEEM--RKHGL-VAEKDIYDIFVDVNYEEGNWEITLELCDEFMTELSGTIF 732
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 116/264 (43%), Gaps = 5/264 (1%)
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL-LKKEMQQAGFEEGKE 333
++ +A+ +FH LL G+ + D S ++L N + +I++ + +E + G
Sbjct: 186 FVLEAQKLFHKLLRYGVVVSVD--SCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTV 243
Query: 334 VLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREM 393
VL + G V +A +++ + N ++ + Y +IGE K L++ E+
Sbjct: 244 SCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDEL 303
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
+ + Y+ II LLCK E E L++ + G+ P Y + + + LG
Sbjct: 304 KGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNV 363
Query: 454 DRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI 512
F E +K P+ Y + + +G + +A E+FN M + + + +
Sbjct: 364 SAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLV-KGLEPDEVTYTA 422
Query: 513 ILSAYLSSGDFVKAEKIYDLMCLK 536
++ Y +G+ +A +++ M K
Sbjct: 423 LIDGYCKAGEMKEAFSVHNQMVQK 446
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 153/380 (40%), Gaps = 29/380 (7%)
Query: 155 MRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
+++R + R+ + M+ + D LAT L + K D+FD++++ G P+
Sbjct: 266 VKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPT 325
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV-----SKPG 269
+T+ +LI +G DE + +MI+ G P N + + L+
Sbjct: 326 NVTYGVLIKG---CDAEGMTDETYKLCRQMIE-QGLLPSTYEFNLVIKGLLRDKRWKDAI 381
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
GL K + ++ T G I WL +Q E ++L K M++AG +
Sbjct: 382 GLLKLVVDTG---VPDVFTYGCLIH--------WLCKHQKL--HEAVNLWDK-MKEAGVK 427
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSL 387
S+L ++G +++A K + + D G P Y M+ Y K F +
Sbjct: 428 PSIVTYHSLLLGYCEKGRMDEALKLYSEM--PDKGFPPNEVTYTTLMKGYIKKKAFDNAY 485
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
+ EM++ S Y+ +I L + ++K F+ G P +Y ++ N +
Sbjct: 486 ALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGF 545
Query: 448 LNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN 506
+ GM + + +K PN Y +++ + A ++ ++ D I +
Sbjct: 546 VKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDG-IQPD 604
Query: 507 TRSCNIILSAYLSSGDFVKA 526
+ N + + G+ +A
Sbjct: 605 IAAYNAFIDTFCKQGNMSRA 624
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 145/351 (41%), Gaps = 18/351 (5%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L ++ K +K + +++D + G PS +T+H L++ Y +G +DEA +Y+ M
Sbjct: 401 LIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCE---KGRMDEALKLYSEMP 457
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
G+ P + +L + G + K A + + + +G+ Y+ LI
Sbjct: 458 D-KGFPPNEVTYTTLMK------GYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILIN-G 509
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
Y N E +LK+ + + GF S++ K G + A + ++ + GI
Sbjct: 510 LYMVNRVCEVDEMLKRFLSE-GFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRK--KGI 566
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
Y ++ Y + ++++ ++ + AY+ I+ CK
Sbjct: 567 TPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALH 626
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLK 482
+ ++ G+ P + Y + Y NL M + +S ++ + IY ++
Sbjct: 627 FLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFS 686
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
GN+ A E+++ M ++ I + ++ + SGD A+++ D M
Sbjct: 687 KVGNVAFALELYSEMMANHVIP-DDKTFTALTHGLCRSGDIDGAKRLLDDM 736
>gi|115475155|ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|40253652|dbj|BAD05595.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623143|dbj|BAF23088.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|125602452|gb|EAZ41777.1| hypothetical protein OsJ_26318 [Oryza sativa Japonica Group]
gi|215695295|dbj|BAG90486.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704436|dbj|BAG93870.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 609
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 152/378 (40%), Gaps = 55/378 (14%)
Query: 166 VYEWMMQQHWYRF---DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
+ EW+ QHW+ F DF + L GK F++ + + +G PS ++ L+
Sbjct: 128 ILEWLRTQHWWNFSEMDFLM---LVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALM 184
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
AY A +A +++ RM Q G +P + + ++ V KY ++AE I
Sbjct: 185 EAYGRAK---QYRKAEAVFRRM-QTSGPEPSAVTYQIILKSFVEG----DKY--KEAEAI 234
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
F +LL ++A F+ +++ ++ +
Sbjct: 235 FEDLLNE----------------------------------KRASFKPDQKMFHMMIYMY 260
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
K GD A K + ++ S+ GIP + + + + I+ +MQ V
Sbjct: 261 KKAGDYAQARKLFAQM--SERGIPLSTVTFNSLMSFETN-YKEVSSIYDQMQRTALKPDV 317
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
+Y +I+ KA E ++ +E ++ G++P SY L + + G+ + H F
Sbjct: 318 VSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKA 377
Query: 463 CLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
+ P+ Y + + NA +++ AE+ F + D + N ++ Y
Sbjct: 378 MRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKED-GLKPNVVVYGTLMKGYSKLN 436
Query: 522 DFVKAEKIYDLMCLKKYE 539
+ + ++Y+ M ++ E
Sbjct: 437 NVERVMRVYERMRMQGVE 454
>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
Length = 477
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 147/357 (41%), Gaps = 27/357 (7%)
Query: 157 IREN--ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
I+EN ET +++ + QQ WY TKL +GK ++ + +F+ + ++G PS
Sbjct: 102 IQENLWETALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPS 161
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY 274
+ L+ AY + G L +A S + M + +P +H + L+ L ++
Sbjct: 162 IDVYTALVSAYGQS---GLLHKAISTVDEMKSIS--DCKPDVHT--YSILIDCCTRLRRF 214
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERI-----SLLKKEMQQAGFE 329
L + I ++ G+ Y+ +I + K ++ SLL + ++
Sbjct: 215 DLLKK--ILADMSCLGITCNTVTYNTII------NGFGKAKMFEQMESLLLEMIESDSCP 266
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSL 387
+ +R +E EK W + + GI + Y + +Y K G + K
Sbjct: 267 PDLITFNTFIRAYGNSEQIEKMEK-WYKEFQL-MGIEPDIWTYNSMISSYGKAGMYDKMK 324
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
+ M++R S ++ + II+ +A E E K GMKP +Y +L N Y
Sbjct: 325 SVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAY 384
Query: 448 LNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
G +++ + P+ ++ + AGN+ K E+F M ++ +
Sbjct: 385 GKSGDLEKVDSILRQIENSDVVPDTPLFNCLINVYGQAGNVRKMGELFLEMKENKCV 441
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 125/281 (44%), Gaps = 17/281 (6%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ TF +I + A G + A +++ M + G P++H F AL+ G +
Sbjct: 584 PTSRTFMPIIHGFARA---GEMKRALDVFDMMRRSGCI---PTVHT--FNALIL--GLVE 633
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
K +++A I + +G+ + Y+ + +H Y D + +++ G +
Sbjct: 634 KRQMEKAIEILDEMALAGVSPNEHTYTTI--MHGYAALGDTGKAFEYFTKLRDEGLQLDV 691
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIF 390
++L+ C K G ++ A + S IP FVY + + +A+ G+ ++ ++
Sbjct: 692 YTYEALLKACCKSGRMQSALAVTKEM--SAQNIPRNTFVYNILIDGWARRGDVWEAADLM 749
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
++M++ + Y I CKA + +M+E +G+KP + +Y L + +
Sbjct: 750 QQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARA 809
Query: 451 GMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKA 490
+ ++ F E L +P++ +Y + +L + + +A
Sbjct: 810 SLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRATVTEA 850
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 143/352 (40%), Gaps = 16/352 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ Y + + R F+ + +G P+ + LI AY V ++EA S +M
Sbjct: 312 MVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAY---AVGRDMEEALSCARKMK 368
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
+ G + + +V GG +K A+ F + IY +I+
Sbjct: 369 EEG-----VEMSLVTYSIIV---GGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYA 420
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
+ N+D+ L +EM+ G + ++ +++ G+ E + RL E
Sbjct: 421 YCQTCNMDQ--AEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFA 478
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
++ + YAK+G+ K+LE+ + M+ ++ Y +I K ++ ++
Sbjct: 479 PSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAI 538
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKN 483
++ V+ G+KP + Y N+ + +G DR E E+ RP + +
Sbjct: 539 FEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFAR 598
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCL 535
AG +++A ++F+ M I + N ++ + KA +I D M L
Sbjct: 599 AGEMKRALDVFDMMRRSGCIPT-VHTFNALILGLVEKRQMEKAIEILDEMAL 649
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 156/414 (37%), Gaps = 68/414 (16%)
Query: 174 HWYRFDFALA-----------------TKLADYMGKERKFAKCRDIFDDIINQGRVPSEM 216
H R DFA + T L + E K + +FD +I +G P+ +
Sbjct: 117 HLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVV 176
Query: 217 TFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYL 276
T+ LI G A + M Q G QP + ++L +L +
Sbjct: 177 TYGTLINGLCKV---GNTSAAIRLLRSMEQ-GNCQPNVVVFSTLIDSLCKD------RQV 226
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
+A IF ++T G+ Y+ LI H + + ++ L EM + L
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLI--HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLN 284
Query: 337 SVLRVCAKEG-----------------------------------DVEDAEKTWLRLLES 361
+V+ KEG +V+ A K + ++
Sbjct: 285 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344
Query: 362 DNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
D ++ + Y KI K++ +F EM + + + Y+ +I LC +
Sbjct: 345 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 404
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGIYLE 479
SL E V G P + +Y L++ YL H +A + +E P+ IY L+
Sbjct: 405 ISLFHEMVARGQIPDLVTYRTLSD-YLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILD 463
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ AG +E A ++F+++ S + + N + NI++ G +A K++ M
Sbjct: 464 GMCRAGELEDARDLFSNL-SSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 64/333 (19%), Positives = 135/333 (40%), Gaps = 35/333 (10%)
Query: 214 SEMTFHILIVAYLSAPVQ-GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
S TFH S P+ LDEA S +NRM+ QP PS + +
Sbjct: 37 SHNTFH-------SKPLHFNTLDEALSTFNRMLH---KQPPPSTVD------------FN 74
Query: 273 KYYLQQAEFIFHNLLTS------GLEIQKDIYSGLIWLHS--YQDNIDKERISLLKKEMQ 324
+ A+ H+ L S I D+Y+ I ++S + + +D +L K +
Sbjct: 75 RLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAK--IL 132
Query: 325 QAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFM 384
+ G + +++R EG + +A + +++ + + K+G
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192
Query: 385 KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT 444
++ + R M++ +V + +I+ LCK + ++ E + G+ P + +Y +L
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 252
Query: 445 NMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
+ L + +E ++ K P+ +++L G + +A ++ + M + +
Sbjct: 253 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVD-MMIHRGV 311
Query: 504 GVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
N + N ++ + + A K++D M K
Sbjct: 312 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344
>gi|356536414|ref|XP_003536733.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 553
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 157/372 (42%), Gaps = 34/372 (9%)
Query: 166 VYEWMMQQHWYRFD----FALAT---KLADYMGKERKFAKCRDIFDDIINQGRVPSEMTF 218
+ +W+ Q+W+ F F L T KL D+ G E+ + + G VP+ ++
Sbjct: 121 ILDWLRTQNWWDFGKMDFFMLITAYGKLGDFNGAEK-------VLGLMNKNGYVPNVVSQ 173
Query: 219 HILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQ 278
L+ AY G + A +I+ RM Q G +P + + + V +KY ++
Sbjct: 174 TALMEAYGKG---GRYNNAEAIFRRM-QKWGPEPSAFTYQIILKTFVQG----NKY--RE 223
Query: 279 AEFIFHNLL---TSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
AE +F NLL S L+ + +++ +I+++ + +K R + M + G ++
Sbjct: 224 AEELFDNLLNDENSPLKPDQKMFNMMIYMYKKAGSYEKARKTFAL--MAERGIQQTTVTY 281
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
S++ E D ++ + ++ +D ++ + AY K ++L +F EM +
Sbjct: 282 NSLMSF---ETDYKEVSNIYDQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLD 338
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
+ AY+ +++ + E +++ K P + SY + + Y+N +
Sbjct: 339 AGVRPTRKAYNILLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYVNADDMEG 398
Query: 456 LHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
F ++ PN YG ++ ++E + + M + I N I+
Sbjct: 399 AEKFFKRLIQDDFEPNVVTYGTLIKGYAKINDLEMVMKKYEEMLV-RGIKANQTILTTIM 457
Query: 515 SAYLSSGDFVKA 526
AY SGDF A
Sbjct: 458 DAYGKSGDFDSA 469
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 8/223 (3%)
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAY 377
+ MQ+ G E +L+ + +AE+ + LL +N P F + Y
Sbjct: 194 RRMQKWGPEPSAFTYQIILKTFVQGNKYREAEELFDNLLNDENSPLKPDQKMFNMMIYMY 253
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
K G + K+ + F M ER + Y+ ++ +E ++ + ++P +
Sbjct: 254 KKAGSYEKARKTFALMAERGIQQTTVTYNSLMSFETDYKEVS---NIYDQMQRADLRPDV 310
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
SY L + Y + F E L+ RP R Y I L++ +G +E+A+ +F
Sbjct: 311 VSYALLVSAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFSISGMVEQAQTVFKS 370
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
M D+ + S +LSAY+++ D AEK + + +E
Sbjct: 371 MRRDRYFP-DLCSYTTMLSAYVNADDMEGAEKFFKRLIQDDFE 412
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
MQ+ R D L GK R+ + +F+++++ G P+ ++IL+ A+ +
Sbjct: 301 MQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAF---SI 357
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G +++A +++ M + Y P + ++ A V+ ++ AE F L+
Sbjct: 358 SGMVEQAQTVFKSM-RRDRYFPDLCSYTTMLSAYVNADD------MEGAEKFFKRLIQDD 410
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
E Y LI Y D E + +EM G + + +L +++ K GD D
Sbjct: 411 FEPNVVTYGTLI--KGYAKINDLEMVMKKYEEMLVRGIKANQTILTTIMDAYGKSGDF-D 467
Query: 351 AEKTWLRLLESDNGIP 366
+ W + +ES NGIP
Sbjct: 468 SAVHWFKEMES-NGIP 482
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 12/242 (4%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
M E + + +I+D + P +++ +L+ AY A + +EA +++ M+ G
Sbjct: 285 MSFETDYKEVSNIYDQMQRADLRPDVVSYALLVSAYGKARRE---EEALAVFEEMLD-AG 340
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
+P +N L A S G ++QA+ +F ++ D+ S L +Y +
Sbjct: 341 VRPTRKAYNILLDAF-SISG-----MVEQAQTVFKSMRRD--RYFPDLCSYTTMLSAYVN 392
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
D E K + Q FE ++++ AK D+E K + +L
Sbjct: 393 ADDMEGAEKFFKRLIQDDFEPNVVTYGTLIKGYAKINDLEMVMKKYEEMLVRGIKANQTI 452
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
M+AY K G+F ++ F+EM+ A + ++ L EE E L+ F
Sbjct: 453 LTTIMDAYGKSGDFDSAVHWFKEMESNGIPPDQKAKNVLLSLPKTDEEREEANELVGHFS 512
Query: 430 ET 431
E
Sbjct: 513 EN 514
>gi|302768505|ref|XP_002967672.1| hypothetical protein SELMODRAFT_88400 [Selaginella moellendorffii]
gi|300164410|gb|EFJ31019.1| hypothetical protein SELMODRAFT_88400 [Selaginella moellendorffii]
Length = 717
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 138/318 (43%), Gaps = 34/318 (10%)
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG 269
G + +TF+++I Y A V+ LD+ I + M P + NSL A V
Sbjct: 261 GVKANTLTFNVMIKLY--ARVEK-LDKLEQILHTMAD-ADVDPDATTFNSLVAAFV---- 312
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
GL + L AE I +L G E QK + + L L + A F+
Sbjct: 313 GLGELSL--AESIVQSLRGEG-EHQKRVPALLPKLREHS-----------------AKFQ 352
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKS 386
++++ + V DA + + + + P F + A AK+G ++
Sbjct: 353 PDVRTYTTLMKGYVQHNRVSDAMQLLVAMQQEKTSAAMPNEVTFTTAIRACAKMGLLDEA 412
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL--MKEFVETGMKPLMPSYINLT 444
I +EM + +A+V Y+ +++ +C T++ +L +++ E G++ + SY L
Sbjct: 413 RVILQEMATQKVAANVVTYNTLLQGVCVFPITDMKRALEIVEDMKEAGVELDVVSYNTLI 472
Query: 445 NMYLNLGMHDRLHLAFSECLEKCRP-NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
N YL G +++ F+ E P ++ YG +++ +G E ++F M D +
Sbjct: 473 NGYLEAGDNEQALAVFTRMREAKVPASKVTYGTLMKAFARSGRTELVVKVFTQMALDPRV 532
Query: 504 GVNTRSCNIILSAYLSSG 521
V+ + N ++ AY +G
Sbjct: 533 RVDVVAWNTLIDAYARAG 550
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 138/328 (42%), Gaps = 13/328 (3%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ R D L D GK +F+++ + G P +T++ LI +
Sbjct: 277 MKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFER 336
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+ +A + M Q G QP +++L A K G L +A F +++ G
Sbjct: 337 ---IPQAFEYLHGMKQ-RGLQPNVVTYSTLIDAFC-KAG-----MLLEANKFFVDMIRVG 386
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
L+ + Y+ LI + ++++ L+ EMQQAG ++L ++G + +
Sbjct: 387 LQPNEFTYTSLIDANCKIGDLNEA--FKLESEMQQAGVNLNIVTYTALLDGLCEDGRMRE 444
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
AE+ + LL++ + + Y K K+++I EM ++ + Y I
Sbjct: 445 AEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIW 504
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRP 469
LC+ E E + ++++E ++ G+ Y L + Y +G E + +
Sbjct: 505 GLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKI 564
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHM 497
YG+ ++ L G +++A F+HM
Sbjct: 565 TVVTYGVLIDGLCKIGLVQQAVRYFDHM 592
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 174/417 (41%), Gaps = 71/417 (17%)
Query: 165 RVYEWM--MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
+ +E++ M+Q + + + L D K + F D+I G P+E T+ LI
Sbjct: 339 QAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLI 398
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
A G L+EA + + M Q G +L+ + AL+ G +++AE +
Sbjct: 399 DANCKI---GDLNEAFKLESEMQQAG-----VNLNIVTYTALLD--GLCEDGRMREAEEL 448
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV- 341
F LL +G + + IY+ L H Y E+ + +EM + + ++LL ++
Sbjct: 449 FGALLKAGWTLNQQIYTSL--FHGYIKAKMMEKAMDILEEMNKKNLK--PDLLLYGTKIW 504
Query: 342 -CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQE--- 395
++ ++ED+ ++ D G+ +++Y ++AY K+G+ +++ + +EMQ+
Sbjct: 505 GLCRQNEIEDSMAVIREMM--DCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGI 562
Query: 396 ---------------RLG-----------------SASVPAYHKIIELLCKAEETELTES 423
++G ++ Y +I+ LCK + E ++
Sbjct: 563 KITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKN 622
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLN-------LGMHDRLHLAFSECLEKCRPNRTIYGI 476
L E ++ G+ P Y +L + + L + +R+ E L+ C I+G
Sbjct: 623 LFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGME-LDLCAYTSLIWG- 680
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G ++ A+ + + M I + C +L Y GD +A ++D M
Sbjct: 681 ----FSRYGQVQLAKSLLDEMLRKGIIP-DQVLCICLLRKYYELGDINEALALHDDM 732
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+L F++M S SV Y+ +I L + + E SL +E G++P + +Y +L +
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294
Query: 446 MYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNA-GNIEKAEEIFNHMHSDQTI 503
Y +GM F E + C P+ Y SL N E+ + F ++H +
Sbjct: 295 GYGKVGMLTGAVSVFEEMKDAGCEPDVITY----NSLINCFCKFERIPQAFEYLHGMKQR 350
Query: 504 GV--NTRSCNIILSAYLSSGDFVKAEKIY 530
G+ N + + ++ A+ +G ++A K +
Sbjct: 351 GLQPNVVTYSTLIDAFCKAGMLLEANKFF 379
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 157/368 (42%), Gaps = 51/368 (13%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
R++++ ++ G P+ +T++ ++ ++ QG + EA + +M ++G P +N
Sbjct: 175 REVYNVMVECGIRPTVVTYNTMLDSFCK---QGKVQEALQLLLQMQKMGCL-PNDVTYNV 230
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
L L S G L +QA+ + +L GLE+ Y LI + + +D+ S L
Sbjct: 231 LVNGL-SHSGEL-----EQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEA--SRL 282
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYA 378
+EM G +++ K G V DA K L ++ + N +P ++ + Y
Sbjct: 283 GEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARK-LLDVMVNKNLMPDLVSYNTLIYGYT 341
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
++G ++ +F E++ R SV Y+ +I+ LC+ + ++ L E ++ G P +
Sbjct: 342 RLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVF 401
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNR-------------------------- 471
++ L + LG F E L + +P+R
Sbjct: 402 TFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEM 461
Query: 472 ---------TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
Y ++++ L GN+++A E+ M + + + +II A+L +G
Sbjct: 462 LARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSII-HAHLMAGH 520
Query: 523 FVKAEKIY 530
KA ++
Sbjct: 521 LRKARAVF 528
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 94/248 (37%), Gaps = 12/248 (4%)
Query: 204 DDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRA 263
D++I G P TF IL+ + G L A +++ M+ G R + +
Sbjct: 389 DEMIKHGPDPDVFTFTILVRGFCKL---GNLPMAKELFDEMLNRGLQPDRFAYITRIVGE 445
Query: 264 LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEM 323
L K G SK + Q E +L G D+ + +++ + + S L K+M
Sbjct: 446 L--KLGDPSKAFGMQEE-----MLARGFP--PDLITYNVFIDGLHKLGNLKEASELVKKM 496
Query: 324 QQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEF 383
G S++ G + A +L +L + + +YA G
Sbjct: 497 LYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRL 556
Query: 384 MKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINL 443
++ F EM E+ +V Y+ +I LCK + + E G+ P +Y L
Sbjct: 557 KLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTIL 616
Query: 444 TNMYLNLG 451
N NLG
Sbjct: 617 INENCNLG 624
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/406 (17%), Positives = 158/406 (38%), Gaps = 34/406 (8%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R+ + +EW + Y+ + L + + K ++++ D+F I
Sbjct: 102 RLIDPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDT 161
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+T+ LI ++ A G + A +++ M + G + +H S+ R L G S
Sbjct: 162 VTYSTLISGFIRA---GKILPAYELFDEMNR-KGLKAHAGVHKSILRGLCDA-GQCSDAV 216
Query: 276 LQQAEF--------IFHNLLTSGLE-------------------IQKDIYSGLIWLHSYQ 308
L E + +N + +GL +++S LH +
Sbjct: 217 LHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFC 276
Query: 309 DNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
E L ++M G +V+ K V++A + ++++
Sbjct: 277 KANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVI 336
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
+ ++ + ++G+ ++E+ R+M ER + Y+ I+ + C+ + E +++
Sbjct: 337 TYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMM 396
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNI 487
++TG P +Y + + + G H + + + CRP+ +++L A I
Sbjct: 397 IQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAI 456
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ A+E+ M + + +I++ A + +AE D+M
Sbjct: 457 DSAQELL-RMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVM 501
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 91/451 (20%), Positives = 164/451 (36%), Gaps = 53/451 (11%)
Query: 108 PEQWRRAKLAWLCKELPSHKGG---TLVRILNAQKKWLRQEDG----------TYLAVHC 154
P Q+R +A +GG +VRILN++ W E T +
Sbjct: 767 PHQYRVTAVA--------TQGGFHHKIVRILNSRFAWEYAETALERFTGKLTTTVVGKVL 818
Query: 155 MRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
+R + ++W Q Y D L + + ++ ++ + + P+
Sbjct: 819 QGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCS--PN 876
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY 274
TF ILI A G + A + M + G Q LHN + + L S
Sbjct: 877 MFTFTILIHGLCRA---GDIGTAYELLKEMPRHGVPQ-NVILHNVVIKGLCSA------R 926
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
L A +F + SG D+++ + S + + L ++M G
Sbjct: 927 KLDSALELFKEMEESG-SCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVT 985
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
S+L K G +++A R+ S + ++ + K+G ++ + EM
Sbjct: 986 YSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMV 1045
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
+ +V Y +++ CK + E L++ VE G P + +Y +L +M+ +
Sbjct: 1046 DGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVE 1105
Query: 455 RLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
R S ++K C PN Y + L A + + + M S+ +
Sbjct: 1106 RACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCV---------- 1155
Query: 514 LSAYLSSGDFVKAEKIYDLMCLKKYEIESAW 544
D V I D MC K Y ++ A+
Sbjct: 1156 -------PDIVTFNTIIDAMC-KTYRVDIAY 1178
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 135/362 (37%), Gaps = 38/362 (10%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M + YR + + + + + +I G P + + +I + A
Sbjct: 361 MTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKA-- 418
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQ--------AEFI 282
G L EA + +MI+ G +P + ++L AL S L + + +
Sbjct: 419 -GKLREAHDLLEQMIRRG-CRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVV 476
Query: 283 FHNLLTSGL---------------EIQKDIYSGLIWLHSYQDNIDKER----ISLLKKEM 323
+++L L ++ Y ++ +S D + K R LL M
Sbjct: 477 AYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRM 536
Query: 324 QQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEF 383
+ AG V+ K+ +++ A K R+ E+ + + K G
Sbjct: 537 RAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTV 596
Query: 384 MKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
K+ ++F+EM LG P Y+ +I+ LCK + E +++ + P +Y
Sbjct: 597 DKAFDVFQEM---LGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITY 653
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
L N N + E +K C P+R YG L +L+ N+E E++ M +
Sbjct: 654 TCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEA 713
Query: 500 DQ 501
+
Sbjct: 714 TE 715
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 141/353 (39%), Gaps = 29/353 (8%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
+ K K + + + G P+ +T++ +I + G +DEA + M+ GG
Sbjct: 993 LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKL---GRIDEAYHLLEEMVD-GG 1048
Query: 250 YQPRPSLHNSLFRALVSKPG------GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
QP + L A K G GL + +++ NL T Y+ L+
Sbjct: 1049 CQPNVVTYTVLLDAF-CKCGKAEDAIGLVEVMVEKG--YVPNLFT---------YNSLLD 1096
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ +D + ER L M Q G +V+ K V + ++L S+N
Sbjct: 1097 MFCKKDEV--ERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML-SNN 1153
Query: 364 GIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+P F ++A K + E+F +QE + ++ Y+ ++ LCK+ + E
Sbjct: 1154 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE 1213
Query: 423 SLMKEFV-ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLES 480
L++E + G P + +Y + + DR + F + L + P+ Y I + S
Sbjct: 1214 YLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISS 1273
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
L +++A + M + + ++ + +G+ KA +I L+
Sbjct: 1274 LCKWRFMDEANNVLELMLKN-GFDPGAITYGTLIDGFCKTGNLDKALEILQLL 1325
>gi|242065966|ref|XP_002454272.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
gi|241934103|gb|EES07248.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
Length = 519
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 160/429 (37%), Gaps = 96/429 (22%)
Query: 131 LVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFR--------VYEWMMQQHWYRFDFAL 182
LV +L+ + +R E HC + E E G R V+ WM +Q WY D +
Sbjct: 74 LVPVLDRHVRGVRTE-------HCFLLFE-ELGRRDAWLQCLEVFRWMQKQRWYVADNGI 125
Query: 183 ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYL-SAPVQGCLDEACSIY 241
+KL MG++ + +F + N G P ++ LI A+L S L +A +
Sbjct: 126 YSKLISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKSKALAKALGYF 185
Query: 242 NRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
+M + QP +N L RA G +K Q + +F +L S + DIY+
Sbjct: 186 EKMKCIARCQPTIVTYNILLRAFAQ--AGDTK----QVDILFKDLDES--VVSPDIYTYN 237
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
L +Y K G +++ E LR+
Sbjct: 238 GVLDAY-----------------------------------GKNGMIKEMESVLLRMKSK 262
Query: 362 DNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
F +++Y + F K ++F+ + + P ++ +I KA E
Sbjct: 263 QCRPDVITFNILIDSYGRKQIFDKMEQVFKSLLRSKERPTHPTFNSMITNYGKARLREKA 322
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESL 481
E ++K+ E G KP + L MY A +C
Sbjct: 323 EYVVKKMEELGYKPNYVTQECLIMMY-----------AHCDC------------------ 353
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIE 541
+ KA ++F+ + S Q V S N +L AY +G +A+++ D L+K +
Sbjct: 354 -----VSKARQVFDELVSSQN-KVQLSSLNSMLDAYCMNGLHTEADQLLD-TALQKCVVP 406
Query: 542 SAWMEKLDY 550
+ KL Y
Sbjct: 407 NGSTYKLLY 415
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 112/257 (43%), Gaps = 11/257 (4%)
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE--GKEVLLSVLR 340
F LL +GL + I S L+ D+ LL + + + +LL L
Sbjct: 100 FGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLC 159
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKSLEIFREMQERL 397
K G ++ LR++ + +P A+ ++ + K G+ K+ ++F+EM +R
Sbjct: 160 NQGKSGQADN----LLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 215
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
+ Y+ ++ LCKA + E+ +++ V + P +Y NL Y + G
Sbjct: 216 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 275
Query: 458 LAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F E P+ + + SL G I++A ++F+ M + + + S NI+L+
Sbjct: 276 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM-AMKGQNPDVFSYNIMLNG 334
Query: 517 YLSSGDFVKAEKIYDLM 533
Y + G V ++DLM
Sbjct: 335 YATKGCLVDMTDLFDLM 351
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 104/261 (39%), Gaps = 10/261 (3%)
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
QA+ + + G D+ + + + D + L KEM Q G S
Sbjct: 166 QADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNS 225
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQER 396
V+ K ++ AE +LR + + +P + + Y+ G++ +++ +F+EM+
Sbjct: 226 VVHALCKARAMDKAE-AFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRH 284
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG----M 452
V ++ LCK + + + G P + SY + N Y G M
Sbjct: 285 SILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDM 344
Query: 453 HDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI 512
D L + + P+ + + +++ N G ++KA IFN M D + + +
Sbjct: 345 TDLFDLMLGDGIA---PDFYTFNVQIKAYANCGMLDKAMIIFNEMR-DHGVKPDVVTYRT 400
Query: 513 ILSAYLSSGDFVKAEKIYDLM 533
+++A G A + ++ M
Sbjct: 401 VIAALCRIGKMDDAMEKFNQM 421
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 127/315 (40%), Gaps = 51/315 (16%)
Query: 134 ILNAQKKW-LRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
+ +A KW LR +Y L +R+ + + GFR+ M+ + + D + L + +
Sbjct: 146 VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA-NGVQPDVYTYSVLINGL 204
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
KE K ++FD+++ +G +P+ +TF LI + G +D A IY RM
Sbjct: 205 CKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCK---NGRVDLAMEIYKRM------ 255
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
L SL L++ +N L GL D L D
Sbjct: 256 -----LSQSLLPDLIT-----------------YNTLIYGLCKNGD-------LKQAHDL 286
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
ID EM G + K +++ C KEGD++ A K R+++ + + A+
Sbjct: 287 ID---------EMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAY 337
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
+ + G+ + + ++ REM + Y II CK + L+KE
Sbjct: 338 TALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQR 397
Query: 431 TGMKPLMPSYINLTN 445
G P + +Y L N
Sbjct: 398 NGHAPSVVTYNVLMN 412
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 79/191 (41%), Gaps = 2/191 (1%)
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP 403
+ G + DA + + E +P +E K+ F + E+ E AS+
Sbjct: 66 ESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFYEEILECGYPASLY 125
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSE 462
++ ++ CK + + +S+ + G++P + SY L N Y+ LG + + L +
Sbjct: 126 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 185
Query: 463 CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
+P+ Y + + L ++ A E+F+ M I N + ++ + +G
Sbjct: 186 LANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIP-NGVTFTTLIDGHCKNGR 244
Query: 523 FVKAEKIYDLM 533
A +IY M
Sbjct: 245 VDLAMEIYKRM 255
>gi|147840633|emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera]
Length = 416
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 120/309 (38%), Gaps = 51/309 (16%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
+ K R+FA + + N ++ E LI +Y + G A +N+M +LG
Sbjct: 83 LAKSRRFADIETLIESHKNDPKITQEPYLSTLIRSY---GIAGMFQHALRTFNQMEELG- 138
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY-Q 308
PR S+ F AL+S SK + Q +F G+ K Y I + SY +
Sbjct: 139 -TPRSSIS---FNALLS-ACNQSKLFDQVPKFFEEIPRRYGIXPDKISYG--ILVKSYCE 191
Query: 309 DNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
+ + IS+LK EM++ G E ++L K+G + AEK W
Sbjct: 192 SGLSDKAISMLK-EMEEKGVEITAVTFTTILDALYKQGQSDRAEKVW------------- 237
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
EM ++ G V AY+ I + + E ++L+ E
Sbjct: 238 ----------------------HEMAKK-GCLDVGAYNVKI-MFAHGGDPENVKALIDEM 273
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNI 487
G+KP SY L Y GM D ++E E C PN + + L +G+
Sbjct: 274 SNAGLKPDTISYNYLMTSYCKSGMMDEAKKVYAELEETGCHPNAATFRTLIYYLCRSGDF 333
Query: 488 EKAEEIFNH 496
E ++F
Sbjct: 334 ETGYKVFKQ 342
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 167/392 (42%), Gaps = 83/392 (21%)
Query: 175 WYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCL 234
W + F T L + K++K + +FD +I+ +P+E+TF+++I Y + G +
Sbjct: 476 WNNYTF---TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYC---LVGNI 529
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK---PGGLSKYY-----LQQAEFIFHNL 286
+A +Y++M+++G +P N +R+L+S G+SK L+ + + +N
Sbjct: 530 RKAFQLYDQMVEMG-LKP----DNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNF 584
Query: 287 LTSGL-----------------------EIQKDIYSGLIWLHSYQDNIDKERISLLKKEM 323
+ L ++ D+ S I +++ DKE+ +L +EM
Sbjct: 585 SLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 644
Query: 324 QQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL------------------------- 358
++ G + ++ +KE ++ A W ++
Sbjct: 645 KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYL 704
Query: 359 ---------LESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM-QERLGSASVPAYH 406
+ + N +P F Y ++ +A G+ K+ ++ M Q L AS+ +++
Sbjct: 705 GSAELLCKEMLAGNVLPN-KFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL--ASIVSFN 761
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK 466
+I+ LCKA + + LM + E+G P SY + + +G ++ ++E L K
Sbjct: 762 ILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 821
Query: 467 -CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+P+ Y I++ G +KA I+ +M
Sbjct: 822 GLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 853
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 143/357 (40%), Gaps = 24/357 (6%)
Query: 183 ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYN 242
A+++ + K R+FA RD+FD ++ G E + I AY + LD A +
Sbjct: 166 ASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRN---LDGARGLVV 222
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
RM + G + +N L L +Q+A + + ++ G+ + Y L+
Sbjct: 223 RM-ESEGVKASAVPYNVLMYGLCKN------MRVQEAVEVKNVMVNIGVTADEVTYRTLV 275
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGF---EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
+ + + E + +M + GF E ++ LR K+ VE+A +L
Sbjct: 276 YGFCRMEEL--EMALRITHDMIRLGFVPSEANCSFMIDELR---KKELVEEAFSLACKL- 329
Query: 360 ESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
D G+ F Y ++ K F + +F+EM R + Y +I LCK
Sbjct: 330 -GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM 388
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGI 476
E L + + G+K + Y +L N Y G DR S + E P Y
Sbjct: 389 IEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSP 448
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ L G++ E+ M +++ I N + +++ + +A +++D M
Sbjct: 449 LIAGLCRNGDLSSCMELHREM-AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM 504
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 74/182 (40%), Gaps = 5/182 (2%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEA 376
L KEM G E + ++ K G +EDA + ++ D GI + Y +
Sbjct: 360 LFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKM--RDKGIKVTVYPYNSLING 417
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
Y K G ++ + M + + + +Y +I LC+ + L +E E G+
Sbjct: 418 YCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWN 477
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
++ L N + D F + ++ PN + + +E GNI KA ++++
Sbjct: 478 NYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYD 537
Query: 496 HM 497
M
Sbjct: 538 QM 539
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 108/260 (41%), Gaps = 18/260 (6%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ QG P ++ F+ ++ LS + + +A + +++M+ + GY P H L
Sbjct: 640 LFREMKEQGVKPDDI-FYTCMIDALSK--EENMIQALNCWDQMV-VDGYSPNTVTHTVLI 695
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L K G YL AE + +L + K Y+ +L + D E+ L
Sbjct: 696 NNLC-KSG-----YLGSAELLCKEMLAGNVLPNKFTYN--CFLDYFATEGDMEKAKDLHS 747
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
M Q + + +C K G +++A ++ ES ++ + K+G
Sbjct: 748 AMLQGHLASIVSFNILIKGLC-KAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMG 806
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ K+ E++ EM + V AY+ I E++ + + +G++P +Y
Sbjct: 807 DINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYR 866
Query: 442 NLTNMYLNLGMHDRLHLAFS 461
L + G+ LH FS
Sbjct: 867 ALLS-----GISLMLHYDFS 881
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 16/245 (6%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
++ +++ +G P T++ILI + +G + +A I+ M + G + + +L
Sbjct: 647 ELVEEMGGKGLAPDVFTYNILINGHCK---EGNVKKALEIFENMSRRG-VRATVVTYTAL 702
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
AL SK G +Q+ + +F + G+ +Y+ LI HS NID R +
Sbjct: 703 IYAL-SKKG-----QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID--RAFEIM 754
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
EM++ +++R G V++A K + E GI Y + Y+
Sbjct: 755 GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE--RGIQPDLVTYNTLISGYS 812
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
G+ +L I EM + + ++ Y+ +I+ LCK + + E+++KE VE G+ P
Sbjct: 813 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 872
Query: 439 SYINL 443
+YI+L
Sbjct: 873 TYISL 877
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 147/361 (40%), Gaps = 58/361 (16%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRV-PSEMTFHILIVAYLSAPVQGCLDEACSIYN 242
T +A + + R A DI ++ +G + P++ T+ +I + G +DEA +++
Sbjct: 524 TVIAGFCSRGRVQAAL-DIMREMRERGGIAPNQYTYGTVISGWCKV---GRVDEAVKVFD 579
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
M+ G +P ++N+L G + L A ++ G+ + Y+ L+
Sbjct: 580 EMLTKGEVKPEAVMYNALIG------GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 633
Query: 303 WLHS-YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
H+ + D E L+ +EM GK
Sbjct: 634 --HALFMDGRGTEAYELV-EEMG------GK----------------------------- 655
Query: 362 DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
G+ F Y + + K G K+LEIF M R A+V Y +I L K + +
Sbjct: 656 --GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 713
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGIY 477
T+ L E V G++P + Y L N + G DR E +EK R P+ Y
Sbjct: 714 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE-MEKKRIAPDDVTYNTL 772
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
+ L G +++A ++ + M +++ I + + N ++S Y GD A +I + M K
Sbjct: 773 MRGLCLLGRVDEARKLIDEM-TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 831
Query: 538 Y 538
+
Sbjct: 832 F 832
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 126/300 (42%), Gaps = 18/300 (6%)
Query: 202 IFDDIINQGRV-PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
+FD+++ +G V P + ++ LI Y QG LD A +RM++ G + +N L
Sbjct: 577 VFDEMLTKGEVKPEAVMYNALIGGYCD---QGKLDTALLYRDRMVERGVAM-TVATYNLL 632
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
AL G Y L + GL Y+ LI H + N+ K+ + + +
Sbjct: 633 VHALFMDGRGTEAYEL------VEEMGGKGLAPDVFTYNILINGHCKEGNV-KKALEIFE 685
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
M + G +++ +K+G V++ +K + + GI +Y + +++
Sbjct: 686 N-MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR--RGIRPDLVLYNALINSHS 742
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
G ++ EI EM+++ + Y+ ++ LC + L+ E E G++P +
Sbjct: 743 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLV 802
Query: 439 SYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+Y L + Y G + D L + + P Y ++ L G + AE + M
Sbjct: 803 TYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 862
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 7/203 (3%)
Query: 357 RLLESDNGIPTP-AFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVP-AYHKIIELL 412
R LE +P P A Y + + G +L+I REM+ER G A Y +I
Sbjct: 506 RALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 565
Query: 413 CKAEETELTESLMKEFVETG-MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPN 470
CK + + E + G +KP Y L Y + G D L +E+
Sbjct: 566 CKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMT 625
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
Y + + +L G +A E+ M + + + + NI+++ + G+ KA +I+
Sbjct: 626 VATYNLLVHALFMDGRGTEAYELVEEM-GGKGLAPDVFTYNILINGHCKEGNVKKALEIF 684
Query: 531 DLMCLKKYEIESAWMEKLDYVLS 553
+ M + L Y LS
Sbjct: 685 ENMSRRGVRATVVTYTALIYALS 707
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 169/448 (37%), Gaps = 65/448 (14%)
Query: 131 LVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
+ R+L A K + T+L C R +E + M + + T +
Sbjct: 147 VARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLC 206
Query: 191 GKERKFAKCRDIFDDIINQGR--VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG 248
G R + D+ + +G P ++F+ +I + QG + +AC+++N M+Q
Sbjct: 207 GDSRS-QEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFK---QGEVSKACNLFNEMVQ-K 261
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
G P +NS+ AL + +AEF+ ++ G+E Y+ +I H Y
Sbjct: 262 GVVPDVGTYNSIVDALCKARA------MDKAEFVLRQMVDKGVEPDGVTYNAII--HGYS 313
Query: 309 DNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE-------- 360
+ + + + ++M G S + K G +DAE+ + +
Sbjct: 314 CSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIV 373
Query: 361 -------------------------SDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREM 393
+D GI + + A+AK G +++ +F EM
Sbjct: 374 SYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEM 433
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
Q + +V Y +I C+ + + G++P Y +L + + MH
Sbjct: 434 QGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFC---MH 490
Query: 454 DRLHLA---FSECLEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFN---HMHSDQTIGV 505
L A SE + K RPN + + SL G + A+++FN H+ TI
Sbjct: 491 GDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTI-- 548
Query: 506 NTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ N ++ Y G KA + D M
Sbjct: 549 --VTFNSLIDGYCLVGKMEKAFGVLDAM 574
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 154/406 (37%), Gaps = 85/406 (20%)
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
E +FA ++F + ++G V + +ILI A+ +G +DEA ++ M Q G +P
Sbjct: 385 EGRFADMNNLFHSMADKGIVSNCHCINILISAHAK---RGMMDEAMLVFTEM-QGQGVRP 440
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+++L A L A F +++ G+E +Y LI H + + D
Sbjct: 441 NVVTYSTLISAFCRMG------RLADAMEKFSQMISIGIEPNTAVYHSLI--HGFCMHGD 492
Query: 313 KERISLLKKEMQQAGFEEGKEVLLS-VLRVCAKEGDVEDAEKTW---------LRLLESD 362
+ EM G V S ++ EG V DA+ + ++ +
Sbjct: 493 LVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFN 552
Query: 363 NGIPTPAFVYKME--------------------------AYAKIGEFMKSLEIFREMQER 396
+ I V KME Y K G+ L +FREM +
Sbjct: 553 SLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHK 612
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI---------NLTN-- 445
+ Y+ +++ L +A T + + E +++G + +Y +LT+
Sbjct: 613 KVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEA 672
Query: 446 --MYLNLGMHD-----RLHLAFSECLEKCR------------------PNRTIYGIYLES 480
++ LG D + L K R PN + YG+ + +
Sbjct: 673 ITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRN 732
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
L G++E+A+ +F+ M ++R N I+ L GD VKA
Sbjct: 733 LLKEGSVEEADTMFSSMEKSGC-APSSRLLNDIIRMLLQKGDIVKA 777
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
+FD + + + + K R+ + D+F I G VP+ T+ ++I L +G ++E
Sbjct: 685 KFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLK---EGSVEE 741
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK--YYLQQAEFIFHNLLTSGLEIQ 294
A ++++ M + G P L N + R L+ K G + K YY+ + + +L S +
Sbjct: 742 ADTMFSSM-EKSGCAPSSRLLNDIIRMLLQK-GDIVKAGYYMSKVDGTIISLEASTTSLL 799
Query: 295 KDIYS 299
++S
Sbjct: 800 MSLFS 804
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 113/247 (45%), Gaps = 4/247 (1%)
Query: 293 IQKDIYSGLIWLHSY-QDNIDKERISL-LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
I+ D+Y+ I ++ + N D + + M + G + ++L + + + D
Sbjct: 6 IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
A K + +++ + + K+G ++++ ++M+E+ +V Y II+
Sbjct: 66 AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRP 469
LCK + + E V G+ P + +Y ++ + + NLG + F + +E+ P
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
+ + I ++ L G I +A+ +F M ++ + N + N ++ Y S +A+K+
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETM-IEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244
Query: 530 YDLMCLK 536
+++M K
Sbjct: 245 FNIMVRK 251
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/379 (18%), Positives = 163/379 (43%), Gaps = 14/379 (3%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M++ + + + + + D + K++ + + +++N+G P+ +T+ ++ + +
Sbjct: 108 MEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNL-- 165
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G +EA S++ +M++ P N L L SK G + +A+ +F ++ G
Sbjct: 166 -GRSNEATSLFKQMVERN-VMPDTVTFNILVDGL-SKEG-----MILEAQCVFETMIEKG 217
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+E + Y+ L+ + Q +D+ + L M + G +++ K G +++
Sbjct: 218 VEPNVNTYNALMDGYCSQSQMDEAQ--KLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDE 275
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
A+ + T + M+ + + G + ++ EM+ + Y +++
Sbjct: 276 AKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLD 335
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRP 469
LCK + L+K E+ ++P + Y L N G + FS K +P
Sbjct: 336 GLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQP 395
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
+ Y + + L G +A E+F M + N+ + N+I+ +L +GD A ++
Sbjct: 396 DVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLP-NSCTYNVIIQGFLRNGDTSNAGRL 454
Query: 530 YDLMCLKKYEIESAWMEKL 548
+ M + + +S+ + L
Sbjct: 455 IEEMVGRGFSADSSTFQML 473
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 135/317 (42%), Gaps = 21/317 (6%)
Query: 186 LADYMGKERKFAKCRDIFDDI--INQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
L D +G ++F D D+ + E+ F ++ AY A + G +A +++
Sbjct: 120 LVDILGSSKQFPLIWDFLSDMRETRCCEICPEI-FWLIFRAYCRANLPG---DAIRAFHQ 175
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M G + L+ K +++QA+ F + +E+ + + I
Sbjct: 176 MGDFGVKAGVGDVDQLLYVLCKRK-------HVKQAQEFFDKV---NVEVMPNAKTYSIL 225
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ + D D L +EM++ G S+L K G+V++A K + + N
Sbjct: 226 MRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREM--GSN 283
Query: 364 GIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
G+ A Y + AY ++ + + ++ M+ +V Y+ I++ LCK+E+ +
Sbjct: 284 GLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEA 343
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLN-LGMHDRLHLAFSECLEKCRPNRTIYGIYLES 480
L+ E +E G+ P + SY + + + ++ L L E C P+R Y + L+
Sbjct: 344 YQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKM 403
Query: 481 LKNAGNIEKAEEIFNHM 497
L G ++ +++ M
Sbjct: 404 LLRVGRFDRVTDVWGGM 420
>gi|326495232|dbj|BAJ85712.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 155/377 (41%), Gaps = 23/377 (6%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
+ +V+E + +Q +Y KL +G+ + + +D+F ++ QG P+ +
Sbjct: 154 QGALQVFEMLKEQPFYYPKEGTYMKLLLLLGRSGQPSLAQDLFTEMQQQGCQPTPELYTA 213
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKP--GGLSKYYLQQ 278
LI AY G LDEA + M QP ++ L +A V P + Y +
Sbjct: 214 LIGAYCR---NGLLDEALKLLQDMKANPLCQPDVYTYSILIKAFVDAPRFDLVDAMYKEM 270
Query: 279 AE-FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
AE + N +T + + +G + D+++K LL ++ A + +
Sbjct: 271 AERSVAPNTVTQNIVLSGYCRAGRL------DDMEK----LLSAMLESANSKPDVWTMNI 320
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
+L + G VE EK + + T F + AY K + K + M+
Sbjct: 321 ILSLFGNSGQVELMEKWYEKFRGYGIEPETRTFNILIGAYGKKRMYDKMSAVMEYMRRLA 380
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL- 456
+ Y+ +IE +A + + E + GMKP ++ L N + N + ++
Sbjct: 381 FPWTTATYNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTKTFCCLINGFSNAALFHKVV 440
Query: 457 -HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILS 515
+ +E L+ PN + + L + A ++ + E +F HM Q + + +I+L
Sbjct: 441 GMVKLAERLD-VPPNTSFHNSVLAACAKAEDLMEMERVFRHMKHMQ-CEPDAITYSILLE 498
Query: 516 AYLSSGDFVKAEKIYDL 532
AY G +K+Y L
Sbjct: 499 AYRKEG---MTDKMYAL 512
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 5/152 (3%)
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
Y K++ LL ++ + L + L E + G +P Y L Y G+ D +
Sbjct: 176 YMKLLLLLGRSGQPSLAQDLFTEMQQQGCQPTPELYTALIGAYCRNGLLDEALKLLQDMK 235
Query: 465 EK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
C+P+ Y I +++ +A + + ++ M +++++ NT + NI+LS Y +G
Sbjct: 236 ANPLCQPDVYTYSILIKAFVDAPRFDLVDAMYKEM-AERSVAPNTVTQNIVLSGYCRAGR 294
Query: 523 FVKAEKIYDLMCLKKYEIESAWMEKLDYVLSL 554
EK+ M W ++ +LSL
Sbjct: 295 LDDMEKLLSAMLESANSKPDVWT--MNIILSL 324
>gi|356575428|ref|XP_003555843.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 562
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 154/372 (41%), Gaps = 34/372 (9%)
Query: 166 VYEWMMQQHWYRFD----FALAT---KLADYMGKERKFAKCRDIFDDIINQGRVPSEMTF 218
+ EW+ Q+W+ F F L T KL D+ G E+ + + G P+ ++
Sbjct: 122 ILEWLRTQNWWDFGKMDFFMLITAYGKLGDFNGAEK-------VLGLMNKNGYAPNVVSQ 174
Query: 219 HILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQ 278
L+ AY G + A +I+ RM Q G +P + + + V ++
Sbjct: 175 TALMEAYGKG---GRYNNAEAIFRRM-QKWGPEPSAFTYQIILKTFVQGNK------FRE 224
Query: 279 AEFIFHNLL---TSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
AE +F NLL S L+ + +++ +I++H + +K R + +M + G ++
Sbjct: 225 AEELFDNLLNDENSPLKPDQKMFNMMIYMHKKAGSYEKARKTF--AQMAELGIQQTTVTY 282
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
S++ E + ++ + ++ +D ++ + AY K ++L +F EM +
Sbjct: 283 NSLMSF---ETNYKEVSNIYDQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLD 339
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
+ AY+ +++ + E +++ K P + SY + + Y+N +
Sbjct: 340 AGIRPTRKAYNILLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYINADDMEG 399
Query: 456 LHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
F ++ PN YG ++ ++E + + M + I N I+
Sbjct: 400 AEKFFKRLIQDGFEPNVVTYGTLIKGYAKINDLEMVMKKYEEMLM-RGIKANQTILTTIM 458
Query: 515 SAYLSSGDFVKA 526
AY SGDF A
Sbjct: 459 DAYGKSGDFDSA 470
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 8/223 (3%)
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAY 377
+ MQ+ G E +L+ + +AE+ + LL +N P F + +
Sbjct: 195 RRMQKWGPEPSAFTYQIILKTFVQGNKFREAEELFDNLLNDENSPLKPDQKMFNMMIYMH 254
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
K G + K+ + F +M E + Y+ ++ +E ++ + ++P +
Sbjct: 255 KKAGSYEKARKTFAQMAELGIQQTTVTYNSLMSFETNYKEVS---NIYDQMQRADLRPDV 311
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
SY L + Y + F E L+ RP R Y I L++ +G +E+A+ +F
Sbjct: 312 VSYALLVSAYGKARREEEALAVFEEMLDAGIRPTRKAYNILLDAFSISGMVEQAQTVFKS 371
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
M D+ + S +LSAY+++ D AEK + + +E
Sbjct: 372 MRRDRYFP-DLCSYTTMLSAYINADDMEGAEKFFKRLIQDGFE 413
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 14/196 (7%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
MQ+ R D L GK R+ + +F+++++ G P+ ++IL+ A+ +
Sbjct: 302 MQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAGIRPTRKAYNILLDAF---SI 358
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G +++A +++ M + Y P + ++ A ++ ++ AE F L+ G
Sbjct: 359 SGMVEQAQTVFKSM-RRDRYFPDLCSYTTMLSAYINADD------MEGAEKFFKRLIQDG 411
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
E Y LI Y D E + +EM G + + +L +++ K GD D
Sbjct: 412 FEPNVVTYGTLI--KGYAKINDLEMVMKKYEEMLMRGIKANQTILTTIMDAYGKSGDF-D 468
Query: 351 AEKTWLRLLESDNGIP 366
+ W + +ES NGIP
Sbjct: 469 SAVHWFKEMES-NGIP 483
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 12/255 (4%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
M E + + +I+D + P +++ +L+ AY A + +EA +++ M+ G
Sbjct: 286 MSFETNYKEVSNIYDQMQRADLRPDVVSYALLVSAYGKARRE---EEALAVFEEMLD-AG 341
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
+P +N L A S G ++QA+ +F ++ D+ S L +Y +
Sbjct: 342 IRPTRKAYNILLDAF-SISG-----MVEQAQTVFKSMRRD--RYFPDLCSYTTMLSAYIN 393
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
D E K + Q GFE ++++ AK D+E K + +L
Sbjct: 394 ADDMEGAEKFFKRLIQDGFEPNVVTYGTLIKGYAKINDLEMVMKKYEEMLMRGIKANQTI 453
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
M+AY K G+F ++ F+EM+ A + ++ L EE E L+ F
Sbjct: 454 LTTIMDAYGKSGDFDSAVHWFKEMESNGIPPDQKAKNVLLSLAKTDEEREEANELVVHFS 513
Query: 430 ETGMKPLMPSYINLT 444
E P + + L
Sbjct: 514 ENSSLPKVNGIVKLV 528
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 89/245 (36%), Gaps = 39/245 (15%)
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEI 389
GK ++ K GD AEK L L+ + P + MEAY K G + + I
Sbjct: 135 GKMDFFMLITAYGKLGDFNGAEKV-LGLMNKNGYAPNVVSQTALMEAYGKGGRYNNAEAI 193
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS---YINLTNM 446
FR MQ+ S Y I++ + + E L + PL P + + M
Sbjct: 194 FRRMQKWGPEPSAFTYQIILKTFVQGNKFREAEELFDNLLNDENSPLKPDQKMFNMMIYM 253
Query: 447 YLNLGMHDRLHLAFSECLE---------------------------------KCRPNRTI 473
+ G +++ F++ E RP+
Sbjct: 254 HKKAGSYEKARKTFAQMAELGIQQTTVTYNSLMSFETNYKEVSNIYDQMQRADLRPDVVS 313
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
Y + + + A E+A +F M D I ++ NI+L A+ SG +A+ ++ M
Sbjct: 314 YALLVSAYGKARREEEALAVFEEML-DAGIRPTRKAYNILLDAFSISGMVEQAQTVFKSM 372
Query: 534 CLKKY 538
+Y
Sbjct: 373 RRDRY 377
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 165/362 (45%), Gaps = 33/362 (9%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + + ++F + + G P + F+ +I A+ + G + EA I+ +
Sbjct: 82 TTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDS---GKVHEAMKIFRK 138
Query: 244 MIQLGGYQPRPSLHNSLFRA--LVSKPGGLSKYYLQQAEFIFHNLLTSG-LEIQKDIYSG 300
M + G +P S N+L + +V +P +A + ++ G ++ + Y+
Sbjct: 139 MKECG-CKPTTSTFNTLIKGFGIVGRP--------HEAMKLLEMMIQDGNVKPNERTYNI 189
Query: 301 LIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
LI ++ ++ E +++ K M +G + ++ R A+ G+ ++AE+ L++ +
Sbjct: 190 LIQAWCTKNELE-EAWNVMHK-MVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQ 247
Query: 361 SDNGIP----TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA-YHKIIELLCKA 415
+N + T + + Y K G ++L +M+E LG P ++ +I+
Sbjct: 248 YNNKVKPNERTCGIIIR--GYCKEGNMTEALRFLYKMKE-LGVHPNPVVFNSLIKGYLDI 304
Query: 416 EETELTE---SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNR 471
+T+ E +LM+EF G+KP + +Y + N + + G+ D F + ++ + P+
Sbjct: 305 TDTDGVEEALTLMEEF---GIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDI 361
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
Y I + AG +KAE + N M + + N I+S + ++G A ++Y+
Sbjct: 362 QAYSILAKGYVRAGQPDKAEALLNSM-TKYGLQANVVIFTTIISGWCAAGKMDCALRLYE 420
Query: 532 LM 533
M
Sbjct: 421 KM 422
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/156 (19%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
M + G+ +++ IF + E ++ Y ++ L + + SL+ + E G+
Sbjct: 50 MSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGV 109
Query: 434 KPLMPSYINLTNMYLNLG-MHDRLHL--AFSECLEKCRPNRTIYGIYLESLKNAGNIEKA 490
KP + + N + + G +H+ + + EC C+P + + ++ G +A
Sbjct: 110 KPDSILFNAMINAFSDSGKVHEAMKIFRKMKEC--GCKPTTSTFNTLIKGFGIVGRPHEA 167
Query: 491 EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
++ M D + N R+ NI++ A+ + + +A
Sbjct: 168 MKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEA 203
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 152/343 (44%), Gaps = 30/343 (8%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + K+ R +FD++ + G VP+ +T+ ++ Y+S +G + A ++ +
Sbjct: 198 LIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVS---RGDMIGAKRVFGELF 254
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF-----IFHNLLTSGLEIQKDIYSG 300
G+ P + + L Y++Q F + + +G+E DI G
Sbjct: 255 D-HGWLPDATTYTILMDG-----------YVKQGRFTDAVKVMDEMEENGVE-PNDITYG 301
Query: 301 LIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
+I L ++ E ++LL +M + + + V+ V EG V++A K W +LL+
Sbjct: 302 VIILGYCKERKSGEALNLL-NDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLK 360
Query: 361 SDNGIPTPAFVYKMEAY-AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
N P A + + K G ++ ++F E ER +S+ Y+ +I +C+ E
Sbjct: 361 K-NCTPDNAITSTLIHWLCKEGNIWEARKLFNEF-ERGTISSLLTYNTLIAGMCEMGELC 418
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYL 478
L + +E G P +Y L +L +G + E L+K C N + Y I +
Sbjct: 419 EAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILV 478
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIG-VNTRSCNIILSAYLSS 520
E L G K EE+ N + + G V+ ++ N+ + ++S+
Sbjct: 479 EGLLKLG---KREELLNILSMIISSGAVDFKAWNLFVPHFVSN 518
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 99/248 (39%), Gaps = 7/248 (2%)
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
S + ++++ I + + D E + EM G ++L GD+
Sbjct: 184 SKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDM 243
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
A++ + L D+G A Y M+ Y K G F ++++ EM+E + Y
Sbjct: 244 IGAKRVFGELF--DHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYG 301
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK 466
II CK ++ +L+ + +E P + ++ G + + L+K
Sbjct: 302 VIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKK 361
Query: 467 -CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
C P+ I + L GNI +A ++FN + T N +++ G+ +
Sbjct: 362 NCTPDNAITSTLIHWLCKEGNIWEARKLFNEFERGTISSLLTY--NTLIAGMCEMGELCE 419
Query: 526 AEKIYDLM 533
A +++D M
Sbjct: 420 AARLWDDM 427
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 5/259 (1%)
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
D Y +I+ S E + L E+Q +G +++ ++V+R + A KT+
Sbjct: 87 DTYHAIIYRLSRARAF--EPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTF 144
Query: 356 LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA-SVPAYHKIIELLCK 414
LR+ + + A + F +F+ + + G +V + +I+ LCK
Sbjct: 145 LRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCK 204
Query: 415 AEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTI 473
+ E + E G+ P + +Y + Y++ G F E + P+ T
Sbjct: 205 KNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATT 264
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
Y I ++ G A ++ + M + + N + +I+ Y +A + + M
Sbjct: 265 YTILMDGYVKQGRFTDAVKVMDEME-ENGVEPNDITYGVIILGYCKERKSGEALNLLNDM 323
Query: 534 CLKKYEIESAWMEKLDYVL 552
KKY SA K+ VL
Sbjct: 324 LEKKYIPNSALCCKVIDVL 342
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 100/470 (21%), Positives = 190/470 (40%), Gaps = 39/470 (8%)
Query: 100 EVIELEELPEQWRRAKLAWLCKELPSHKGGT-----LVRILNAQKKWLRQEDGTYLAVHC 154
E +EL E EQ R+ A+ + G +L QK + + +A +C
Sbjct: 318 EAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKA--KGSIPSVIAYNC 375
Query: 155 M-----RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQ 209
+ + R E R++E M + + L D + +E K +I DD+
Sbjct: 376 ILTCLGKKRRVEEALRIFEEMKRDAVP--NVPTYNILIDMLCREGKLNAALEIRDDMERA 433
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL-FRALVSKP 268
G P+ +T +I+I A L+EACSI+ G + N++ F +L+
Sbjct: 434 GLFPNVLTVNIMIDRLCKAQK---LEEACSIFE------GMDDKVCTPNAVTFSSLIDGL 484
Query: 269 GGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
G + + A ++ +L G +Y+ LI S+ KE + KEM G
Sbjct: 485 GKCGR--VDDAYSLYEKMLDCGHVPGAIVYTSLI--RSFFKCGRKEDGHKIYKEMVHTGC 540
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSL 387
++ + + K G+ E + R + + IP ++ + K G ++
Sbjct: 541 SPDLTLINTYMDCVFKAGETEKG-RALFREINAHGFIPDARSYSILIHGLVKAGLANETY 599
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
E+F M+E+ AY+ +I+ CK+ + L++E G P + +Y ++ +
Sbjct: 600 ELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGL 659
Query: 448 LNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN 506
+ D ++ F E + N +Y ++ G I++A I + + + N
Sbjct: 660 AKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQ-KGLTPN 718
Query: 507 TRSCNIILSAYLSSGDFVKAEKIYD-LMCLKKYEIESAWMEKLDYVLSLN 555
+ N +L A VKAE+I + L+C + + ++ Y + +N
Sbjct: 719 VYTWNCLLDA------LVKAEEINEALICFQSMKDLKCPPNQITYSILIN 762
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 7/219 (3%)
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--ME 375
+L +MQ+ G+E + +++RV A+EG V DA + L ++S N + +Y ++
Sbjct: 216 ILFHQMQELGYEVNVHLFTTLIRVFAREGRV-DAALSLLDEMKS-NSLDADIVLYNVCID 273
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ K G+ S + F EM+ Y +I +LCKA + L ++ + P
Sbjct: 274 CFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVP 333
Query: 436 LMPSYINLTNMYLNLGMHDRLH-LAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+Y + Y + G D + L + + P+ Y L L +E+A IF
Sbjct: 334 CAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIF 393
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M D V T NI++ G A +I D M
Sbjct: 394 EEMKRDAVPNVPTY--NILIDMLCREGKLNAALEIRDDM 430
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 140/362 (38%), Gaps = 47/362 (12%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ H D T + + K + + ++F+ + +VP ++ +I+ Y SA
Sbjct: 291 MKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSA-- 348
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNL---- 286
G DEA + R + G P +N + L K +++A IF +
Sbjct: 349 -GKFDEAYGLLERQ-KAKGSIPSVIAYNCILTCLGKK------RRVEEALRIFEEMKRDA 400
Query: 287 -------------------LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
L + LEI+ D+ ++ + NI +R+ +K +
Sbjct: 401 VPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACS 460
Query: 328 FEEGKE---------VLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEA 376
EG + S++ K G V+DA + ++L D G A VY + +
Sbjct: 461 IFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKML--DCGHVPGAIVYTSLIRS 518
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
+ K G +I++EM S + + ++ + KA ETE +L +E G P
Sbjct: 519 FFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPD 578
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
SY L + + G+ + + F E+ C + Y ++ +G + KA ++
Sbjct: 579 ARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLE 638
Query: 496 HM 497
M
Sbjct: 639 EM 640
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 150/340 (44%), Gaps = 24/340 (7%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T + D M KERK + R I ++++ +G VPS +T++ LI Y +G ++ A I
Sbjct: 358 TVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCE---EGRIEAALEILGL 414
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
M + +P +N L G SK ++ +A + +L S L Y+ LI
Sbjct: 415 M-ESNNCRPNERTYNELI-------CGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLI 466
Query: 303 WLHSYQDNIDK--ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
+ + D + + LLK + G + + K +E+A + L E
Sbjct: 467 HVQCKAGHFDSAYKLLDLLK----ENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKE 522
Query: 361 SDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
GI +Y ++ + K G+ +++ + M + Y+ +I +CK +
Sbjct: 523 K--GIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKV 580
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIY 477
+ S+++ + G+KP + +Y L L G D + F++ + +P+ Y +
Sbjct: 581 QEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAF 640
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
+ + +GN+++AE + M + + ++ + +++SAY
Sbjct: 641 IHTYCTSGNVKEAEGMMARM-IEAGVMPDSLTYTLLISAY 679
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 110/265 (41%), Gaps = 16/265 (6%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+ +A + +GL Y+ LI Y N D + M G +
Sbjct: 230 IVEANLYVSKIFQAGLSPDSFTYTSLIL--GYCRNNDVNSAYKVFNMMPNKGCRRNEVSY 287
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGE--FMKSLEIFREM 393
+++ + G +++ + ++ E D+ PT Y + +A G ++ +++F EM
Sbjct: 288 TTIIHGLCEAGRIDEGISLFKKMRE-DDCYPT-VRTYTVIIHALFGNDRNLEGMDLFNEM 345
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
+ER +V Y +++ +CK + + + ++ E +E G+ P + +Y L Y G
Sbjct: 346 RERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEG-- 403
Query: 454 DRLHLAFSECL-----EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTR 508
R+ A E L CRPN Y + ++ KA + + M + + +
Sbjct: 404 -RIEAAL-EILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKM-LESKLTPSLV 460
Query: 509 SCNIILSAYLSSGDFVKAEKIYDLM 533
+ N ++ +G F A K+ DL+
Sbjct: 461 TYNSLIHVQCKAGHFDSAYKLLDLL 485
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 96/224 (42%), Gaps = 16/224 (7%)
Query: 188 DYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL 247
D + K ++ + D+F+ + +G +E+ + LI + A G +DEA S+ RM
Sbjct: 502 DTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKA---GKIDEAISLLERM-HS 557
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
P S +NSL V K G + Q+ + N+ G++ Y+ LI
Sbjct: 558 EDCLPNSSTYNSLIYG-VCKEGKV-----QEGLSMVENMSKMGVKPTVATYTILIEEMLR 611
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+ + D + + +M G + + + G+V++AE R++E+ G+
Sbjct: 612 EGDFDHA--NRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEA--GVMP 667
Query: 368 PAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
+ Y + AY ++G + + + M + S P ++ +I
Sbjct: 668 DSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 127/321 (39%), Gaps = 15/321 (4%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D+ T L G+ K + +++F ++I++G P E+T+ LI Y A G + A
Sbjct: 397 DYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKA---GEMVNAF 453
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDI 297
S++N M+Q+G P + +L GL K+ L A + + GL++ I
Sbjct: 454 SLHNEMVQMG-MTPNIVTYGALI-------DGLCKHGELDTANELLDEMRKKGLQLNVCI 505
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
Y+ ++ NI E+ L KEM+ AG + +V+ + GD++ A K
Sbjct: 506 YNSMVNGICKAGNI--EQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQE 563
Query: 358 LLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
+L+ F M + +G + M E+ Y+ +++ C
Sbjct: 564 MLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS 623
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-PNRTIYGI 476
T + K G+ P +Y L + + E +EK P T Y
Sbjct: 624 MNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNA 683
Query: 477 YLESLKNAGNIEKAEEIFNHM 497
++ I +A E+F M
Sbjct: 684 LIKRFYKKKKILEARELFEEM 704
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 121/283 (42%), Gaps = 12/283 (4%)
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P P + F+ LV +L +A + LL+ GL + D S +L +N
Sbjct: 188 PNPIAFDIFFQVLVEIG------HLSEARKLLDKLLSYGLVVTVD--SCNAFLSRIANN- 238
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
E I + K + G ++ + G V++A + +++ + ++
Sbjct: 239 -SEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYS 297
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
++ Y +GE K+L++ +MQ + + Y+ II LLCK ++ E +++E +
Sbjct: 298 TVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ 357
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKA 490
+ P Y L + + LG + F E L +K P+ Y ++ G + +
Sbjct: 358 KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417
Query: 491 EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ +F+ M S + + + + ++ Y +G+ V A +++ M
Sbjct: 418 QNLFHEMIS-RGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEM 459
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 110/260 (42%), Gaps = 14/260 (5%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWL-HSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
L++A + ++ GL+ + Y+ +I L + + E++ +EM V
Sbjct: 309 LKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVL---REMMSQKIIPDNVV 365
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
+++ K G V A K + +L + ++ + + G+ ++ +F EM
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
R Y +I++ CKA E SL E V+ GM P + +Y L + L H
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALID---GLCKHG 482
Query: 455 RLHLAFSECLEKCRP-----NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
L A +E L++ R N IY + + AGNIE+A ++ M I + +
Sbjct: 483 ELDTA-NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV-AGIDPDAIT 540
Query: 510 CNIILSAYLSSGDFVKAEKI 529
++ AY GD KA K+
Sbjct: 541 YTTVIDAYCRLGDIDKAHKL 560
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 88/213 (41%), Gaps = 2/213 (0%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
EM G + + +++ V K G++ +A +++ + ++ K G
Sbjct: 423 EMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHG 482
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
E + E+ EM+++ +V Y+ ++ +CKA E LMKE G+ P +Y
Sbjct: 483 ELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYT 542
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
+ + Y LG D+ H E L++ +P + + + G +E + + M +
Sbjct: 543 TVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM-LE 601
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ I + + N ++ + KIY M
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRM 634
>gi|302821834|ref|XP_002992578.1| hypothetical protein SELMODRAFT_43484 [Selaginella moellendorffii]
gi|300139647|gb|EFJ06384.1| hypothetical protein SELMODRAFT_43484 [Selaginella moellendorffii]
Length = 427
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 128/294 (43%), Gaps = 21/294 (7%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ T+ +L+ A G +DEAC ++N M GG + + ++++ L L+ + G L
Sbjct: 35 PNAFTYTVLVRGLCDA---GRIDEACEVFNEMQGRGGIEAKTAIYSVLLNGLL-RSGKLD 90
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
F ++ ++ + YS +I+ S Q +D + + +EM
Sbjct: 91 D------AFSYYQMMQETCQPDSSTYSTMIYELSRQGRLD--HATKVAQEMVDKDKIPDM 142
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFR 391
L L + + G V DA K LR+++ + P Y + + + G ++L+ F
Sbjct: 143 PCLGVALEILCRCGRVSDAWK-LLRMMKEKHFKPDAVPHTYVLRKFCEAGRLDEALKGFE 201
Query: 392 EM--QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
EM E+ V Y I++ LC A+ + M++ V G P + ++ +L +
Sbjct: 202 EMTGNEKCEPDFV-TYSVIVDGLCSAQRLDDAWKFMEKMVAKGRMPDVRTFRSLVESHSK 260
Query: 450 LGM-HDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQT 502
+ DR L E ++ +P T+Y + L L G +A E++ + S T
Sbjct: 261 PRLVEDRGKL---EDGKRAKPTATMYTLLLYGLLRKGRAGEAMELYQQVLSGST 311
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 47/92 (51%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
K G +A++ + ++ D T + + ++G ++LE+FREM +R
Sbjct: 326 GKAGRGLEADEVFSDMIRGDVSPQTVTYNALISGLCRVGRVERALELFREMPQRECRPDA 385
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMK 434
Y +++ +CKAE + +L++E E+G++
Sbjct: 386 ATYGALLDGICKAERADDAVTLLREASESGVE 417
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
+PN Y + + L +AG I++A E+FN M I T +++L+ L SG A
Sbjct: 34 KPNAFTYTVLVRGLCDAGRIDEACEVFNEMQGRGGIEAKTAIYSVLLNGLLRSGKLDDAF 93
Query: 528 KIYDLM 533
Y +M
Sbjct: 94 SYYQMM 99
>gi|42572723|ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646343|gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 152/357 (42%), Gaps = 44/357 (12%)
Query: 166 VYEWMMQQHWYRF---DFALAT----KLADYMGKERKFAKCRDIFDDIINQGRVPSEMTF 218
+ EW+ Q+W+ F DF + KL ++ G ER + + G P+ +++
Sbjct: 132 ILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAER-------VLSVLSKMGSTPNVISY 184
Query: 219 HILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQ 278
L+ +Y G + A +I+ RM Q G +P + + + V ++
Sbjct: 185 TALMESYGRG---GKCNNAEAIFRRM-QSSGPEPSAITYQIILKTFVEGDK------FKE 234
Query: 279 AEFIFHNLL---TSGLEIQKDIYSGLIWLHSYQDNIDKER---ISLLKKEMQQAGFEEGK 332
AE +F LL S L+ + +Y +I+++ N +K R S++ K + Q+
Sbjct: 235 AEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQS------ 288
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
++ + + E ++ K + ++ SD ++ ++AY + ++L +F E
Sbjct: 289 --TVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEE 346
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
M + + AY+ +++ + E +++ K + P + SY + + Y+N
Sbjct: 347 MLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASD 406
Query: 453 HDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH-----SDQTI 503
+ F ++ PN YG ++ A ++EK E++ M ++QTI
Sbjct: 407 MEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTI 463
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 8/223 (3%)
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKME--AY 377
+ MQ +G E +L+ + ++AE+ + LL+ P +Y M Y
Sbjct: 205 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 264
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
K G + K+ ++F M + S Y+ ++ +E + + + ++P +
Sbjct: 265 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDV 321
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
SY L Y + F E L+ RP Y I L++ +G +E+A+ +F
Sbjct: 322 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 381
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
M D+ I + S +LSAY+++ D AEK + + + +E
Sbjct: 382 MRRDR-IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 423
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 90/236 (38%), Gaps = 39/236 (16%)
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREM 393
L ++ K G+ AE+ L +L P ++ ME+Y + G+ + IFR M
Sbjct: 149 FLMLITAYGKLGNFNGAERV-LSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRM 207
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS---YINLTNMYLNL 450
Q S Y I++ + ++ + E + + ++ PL P Y + MY
Sbjct: 208 QSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKA 267
Query: 451 GMHDRLHLAFSECLEKCRPNRTI---------------------------------YGIY 477
G +++ FS + K P T+ Y +
Sbjct: 268 GNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALL 327
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+++ A E+A +F M D + ++ NI+L A+ SG +A+ ++ M
Sbjct: 328 IKAYGRARREEEALSVFEEML-DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
>gi|30694913|ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g59040
gi|332646344|gb|AEE79865.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 152/357 (42%), Gaps = 44/357 (12%)
Query: 166 VYEWMMQQHWYRF---DFALAT----KLADYMGKERKFAKCRDIFDDIINQGRVPSEMTF 218
+ EW+ Q+W+ F DF + KL ++ G ER + + G P+ +++
Sbjct: 125 ILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAER-------VLSVLSKMGSTPNVISY 177
Query: 219 HILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQ 278
L+ +Y G + A +I+ RM Q G +P + + + V ++
Sbjct: 178 TALMESYGRG---GKCNNAEAIFRRM-QSSGPEPSAITYQIILKTFVEGDK------FKE 227
Query: 279 AEFIFHNLL---TSGLEIQKDIYSGLIWLHSYQDNIDKER---ISLLKKEMQQAGFEEGK 332
AE +F LL S L+ + +Y +I+++ N +K R S++ K + Q+
Sbjct: 228 AEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQS------ 281
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
++ + + E ++ K + ++ SD ++ ++AY + ++L +F E
Sbjct: 282 --TVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEE 339
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
M + + AY+ +++ + E +++ K + P + SY + + Y+N
Sbjct: 340 MLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASD 399
Query: 453 HDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH-----SDQTI 503
+ F ++ PN YG ++ A ++EK E++ M ++QTI
Sbjct: 400 MEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTI 456
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 8/223 (3%)
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKME--AY 377
+ MQ +G E +L+ + ++AE+ + LL+ P +Y M Y
Sbjct: 198 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 257
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
K G + K+ ++F M + S Y+ ++ +E + + + ++P +
Sbjct: 258 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDV 314
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
SY L Y + F E L+ RP Y I L++ +G +E+A+ +F
Sbjct: 315 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 374
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
M D+ I + S +LSAY+++ D AEK + + + +E
Sbjct: 375 MRRDR-IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 416
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 90/236 (38%), Gaps = 39/236 (16%)
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREM 393
L ++ K G+ AE+ L +L P ++ ME+Y + G+ + IFR M
Sbjct: 142 FLMLITAYGKLGNFNGAERV-LSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRM 200
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS---YINLTNMYLNL 450
Q S Y I++ + ++ + E + + ++ PL P Y + MY
Sbjct: 201 QSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKA 260
Query: 451 GMHDRLHLAFSECLEKCRPNRTI---------------------------------YGIY 477
G +++ FS + K P T+ Y +
Sbjct: 261 GNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALL 320
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+++ A E+A +F M D + ++ NI+L A+ SG +A+ ++ M
Sbjct: 321 IKAYGRARREEEALSVFEEML-DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 111/249 (44%), Gaps = 22/249 (8%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
+ER+ + + + G P+ ++++ LI Y S G LD+A S++N+M + G
Sbjct: 316 QERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSI---GNLDKASSLFNQM-KSSGQS 371
Query: 252 PRPSLHNSLFRAL--VSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
P + +N L G++ + + GL K Y+ L+ D
Sbjct: 372 PSLATYNILIAGFSEAKNSAGVTD--------MVREMEARGLSPSKVTYTILMDALVRSD 423
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE---SDNGIP 366
NI E+ + M++AG + ++ GD+++A K + L E N +
Sbjct: 424 NI--EKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVI 481
Query: 367 TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
+Y Y K G ++L + +EM E +V +Y+ I++LCK E+ E L+K
Sbjct: 482 YNTMIY---GYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLK 538
Query: 427 EFVETGMKP 435
+ +E G+KP
Sbjct: 539 DMIELGLKP 547
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 146/355 (41%), Gaps = 53/355 (14%)
Query: 219 HILI-VAYLSAPVQGCLDEACSIY-NRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYL 276
H+LI A ++A V+ L E Y N+MI G P + N+L L+ +
Sbjct: 94 HVLIHEAIINAHVRSQLPEQALFYFNQMIG-RGLVPGSNTFNNLLILLIKSN------FF 146
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
++A +F+ T G ++ D+YS I + + ++ + +M++ G V
Sbjct: 147 EKAWRVFNE--TKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYT 203
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK---------------MEAYAKI- 380
+++ C K GD+E ++ + ++ E D + + Y +E Y K+
Sbjct: 204 TLIDGCCKNGDIERGKQLFYKMGELD--VVANQYTYTVLINGFFKMGLKKDGIELYEKMK 261
Query: 381 ---------------------GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
G+ + E+F EM+ER + +V Y+ +I LC+
Sbjct: 262 LTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVL 321
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-PNRTIYGIYL 478
E LM G+ P + SY L + Y ++G D+ F++ + P+ Y I +
Sbjct: 322 EAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILI 381
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A N ++ M + + + + + I++ A + S + KA +IY M
Sbjct: 382 AGFSEAKNSAGVTDMVREMEA-RGLSPSKVTYTILMDALVRSDNIEKAFQIYSSM 435
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 16/245 (6%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
++ +++ +G P T++ILI + +G + +A I+ M + G + + SL
Sbjct: 200 ELVEEMGGKGLAPDVFTYNILINGHCK---EGNVKKALEIFENMSRRG-VRATVVTYTSL 255
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
AL SK G +Q+ + +F + G+ +Y+ LI HS NID R +
Sbjct: 256 IYAL-SKKG-----QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID--RAFEIM 307
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
EM++ +++R G V++A K + + GI Y + Y+
Sbjct: 308 GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM--TKRGIQPDLVTYNTLISGYS 365
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
G+ +L I EM + + ++ Y+ +I+ LCK + + E+++KE VE G+ P
Sbjct: 366 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 425
Query: 439 SYINL 443
+YI+L
Sbjct: 426 TYISL 430
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 133/334 (39%), Gaps = 56/334 (16%)
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG 269
G P++ T+ +I + G +DEA +++ M+ G +P ++N+L G
Sbjct: 103 GIAPNQYTYGTVISGWCKV---GRVDEAVKVFDEMLTKGEVKPEAVMYNALI------GG 153
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHS-YQDNIDKERISLLKKEMQQAGF 328
+ L A ++ G+ + Y+ + +H+ + D E L+ +EM
Sbjct: 154 YCDQGKLDTALLYRDRMVERGVAMTVATYN--LLVHALFMDGRGTEAYELV-EEMG---- 206
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKS 386
GK G+ F Y + + K G K+
Sbjct: 207 --GK-------------------------------GLAPDVFTYNILINGHCKEGNVKKA 233
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNM 446
LEIF M R A+V Y +I L K + + T+ L E V G++P + Y L N
Sbjct: 234 LEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 293
Query: 447 YLNLGMHDRLHLAFSECLEKCR--PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
+ G DR E +EK R P+ Y + L G +++A ++ + M + + I
Sbjct: 294 HSTSGNIDRAFEIMGE-MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM-TKRGIQ 351
Query: 505 VNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKY 538
+ + N ++S Y GD A +I + M K +
Sbjct: 352 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 385
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 126/300 (42%), Gaps = 18/300 (6%)
Query: 202 IFDDIINQGRV-PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
+FD+++ +G V P + ++ LI Y QG LD A +RM++ G + +N L
Sbjct: 130 VFDEMLTKGEVKPEAVMYNALIGGYCD---QGKLDTALLYRDRMVERG-VAMTVATYNLL 185
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
AL G Y L + GL Y+ LI H + N+ K+ + + +
Sbjct: 186 VHALFMDGRGTEAYEL------VEEMGGKGLAPDVFTYNILINGHCKEGNV-KKALEIFE 238
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
M + G S++ +K+G V++ +K + + GI +Y + +++
Sbjct: 239 N-MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR--RGIRPDLVLYNALINSHS 295
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
G ++ EI EM+++ + Y+ ++ LC + L+ E + G++P +
Sbjct: 296 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLV 355
Query: 439 SYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+Y L + Y G + D L + + P Y ++ L G + AE + M
Sbjct: 356 TYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 415
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 7/203 (3%)
Query: 357 RLLESDNGIPTP-AFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVP-AYHKIIELL 412
R LE +P P A Y + + G +L+I REM+ER G A Y +I
Sbjct: 59 RALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 118
Query: 413 CKAEETELTESLMKEFVETG-MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPN 470
CK + + E + G +KP Y L Y + G D L +E+
Sbjct: 119 CKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMT 178
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
Y + + +L G +A E+ M + + + + NI+++ + G+ KA +I+
Sbjct: 179 VATYNLLVHALFMDGRGTEAYELVEEMGG-KGLAPDVFTYNILINGHCKEGNVKKALEIF 237
Query: 531 DLMCLKKYEIESAWMEKLDYVLS 553
+ M + L Y LS
Sbjct: 238 ENMSRRGVRATVVTYTSLIYALS 260
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 141/332 (42%), Gaps = 17/332 (5%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M +H + + + D + F +++D+++ G P + ++IL+ A+ A
Sbjct: 316 MDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKA-- 373
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G +D+A + I+ P + S+ V GG +Q+A +F + T+G
Sbjct: 374 -GRMDKALGVLEN-IEANRLLPTIETYTSILDGYVK--GG----NIQKALEVFDRIKTAG 425
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
L Y+ L+ + ++ R+ L EM G + + ++ A+ GDVE
Sbjct: 426 LRPGVVSYNSLLSGLAKARQMENARLML--NEMLANGVVPSERIYTALTEGYARTGDVEK 483
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
A + R+ + + I A+ ++A G + E+F+++ + + Y +++
Sbjct: 484 AFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLD 543
Query: 411 -LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL----E 465
+A E E L+ G KP Y +L N Y G H+ + ++ + +
Sbjct: 544 GAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSK 603
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ +P+ Y ++ AG I +AEE+F +
Sbjct: 604 QTKPDIGTYNTLIQVYAQAGFIPRAEELFQGL 635
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 4/181 (2%)
Query: 356 LRLLESDNGIPT-PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCK 414
L +E++ +PT + ++ Y K G K+LE+F ++ V +Y+ ++ L K
Sbjct: 383 LENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAK 442
Query: 415 AEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTI 473
A + E ++ E + G+ P Y LT Y G ++ F E +
Sbjct: 443 ARQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVA 502
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS-CNIILSAYLSSGDFVKAEKIYDL 532
YG L++ N+G + A E+F + +D + N + C ++ AY +G +AE++
Sbjct: 503 YGALLKACCNSGAMHGAAEVFQQI-TDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSA 561
Query: 533 M 533
M
Sbjct: 562 M 562
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 146/375 (38%), Gaps = 47/375 (12%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSA-PVQGCLDEACSIYNRM 244
L D+ + R F+ + P+ + LI AY A ++G + AC+ M
Sbjct: 137 LVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAV--ACT--EEM 192
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
+ G L+ ++F +++S G S + AE F L +Y+ ++
Sbjct: 193 LSQG-----IQLNEAVFCSIIS--GYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQA 245
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES--- 361
+ N+ E + L +M++ GF+ + +VL A+ D E + RL S
Sbjct: 246 YCQAGNM--ETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQA 303
Query: 362 --------------DNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
+G+ +Y M + YA+ G+F + +++ +M + Y
Sbjct: 304 GNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIY 363
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-------MHDRLHL 458
+ ++ CKA + +++ + P + +Y ++ + Y+ G + DR+
Sbjct: 364 NILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKT 423
Query: 459 AFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
A RP Y L L A +E A + N M ++ + + R + Y
Sbjct: 424 A------GLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVV-PSERIYTALTEGYA 476
Query: 519 SSGDFVKAEKIYDLM 533
+GD KA ++ M
Sbjct: 477 RTGDVEKAFGVFQRM 491
>gi|7529747|emb|CAB86932.1| putative protein [Arabidopsis thaliana]
gi|24030379|gb|AAN41351.1| unknown protein [Arabidopsis thaliana]
Length = 526
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 149/353 (42%), Gaps = 36/353 (10%)
Query: 166 VYEWMMQQHWYRF---DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
+ EW+ Q+W+ F DF + L GK F + + G P+ +++ L+
Sbjct: 68 ILEWLRYQNWWNFSEIDFLM---LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALM 124
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
+Y G + A +I+ RM Q G +P + + + V ++AE +
Sbjct: 125 ESYGRG---GKCNNAEAIFRRM-QSSGPEPSAITYQIILKTFVEGDK------FKEAEEV 174
Query: 283 FHNLL---TSGLEIQKDIYSGLIWLHSYQDNIDKER---ISLLKKEMQQAGFEEGKEVLL 336
F LL S L+ + +Y +I+++ N +K R S++ K + Q+ +
Sbjct: 175 FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQS--------TV 226
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
+ + + E ++ K + ++ SD ++ ++AY + ++L +F EM +
Sbjct: 227 TYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 286
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
+ AY+ +++ + E +++ K + P + SY + + Y+N +
Sbjct: 287 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 346
Query: 457 HLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH-----SDQTI 503
F ++ PN YG ++ A ++EK E++ M ++QTI
Sbjct: 347 EKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTI 399
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 8/223 (3%)
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKME--AY 377
+ MQ +G E +L+ + ++AE+ + LL+ P +Y M Y
Sbjct: 141 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 200
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
K G + K+ ++F M + S Y+ ++ +E + + + ++P +
Sbjct: 201 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDV 257
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
SY L Y + F E L+ RP Y I L++ +G +E+A+ +F
Sbjct: 258 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 317
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
M D+ I + S +LSAY+++ D AEK + + + +E
Sbjct: 318 MRRDR-IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 359
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 90/236 (38%), Gaps = 39/236 (16%)
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREM 393
L ++ K G+ AE+ L +L P ++ ME+Y + G+ + IFR M
Sbjct: 85 FLMLITAYGKLGNFNGAERV-LSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRM 143
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS---YINLTNMYLNL 450
Q S Y I++ + ++ + E + + ++ PL P Y + MY
Sbjct: 144 QSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKA 203
Query: 451 GMHDRLHLAFSECLEKCRPNRTI---------------------------------YGIY 477
G +++ FS + K P T+ Y +
Sbjct: 204 GNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALL 263
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+++ A E+A +F M D + ++ NI+L A+ SG +A+ ++ M
Sbjct: 264 IKAYGRARREEEALSVFEEML-DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 318
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 138/359 (38%), Gaps = 18/359 (5%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L +Y+ K + + R FD +I +G P T+ ILI Y + +G L E S + M+
Sbjct: 310 LLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYAT---KGALSEMHSFLDLMV 366
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ G P + N F A +K G + K A IF+ + GL Y LI
Sbjct: 367 E-NGLSPDHHIFNIFFSA-YAKCGMIDK-----AMDIFNKMRQHGLSPNVVNYGALIDAL 419
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+D + +M G V S++ E AE+ +L D GI
Sbjct: 420 CKLGRVDDAEVKF--NQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEML--DQGI 475
Query: 366 -PTPAFVYKMEA-YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
P F + +G M+ + M+ +Y +I C T+ E
Sbjct: 476 CPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEK 535
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLK 482
+ V G+ P +Y L + Y + D + F E L K P Y L L
Sbjct: 536 VFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLF 595
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIE 541
+A+E++ +M + T + + NIIL+ S +A K++ +C K ++
Sbjct: 596 QTKRFSEAKELYLNMINSGT-KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLN 653
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 140/337 (41%), Gaps = 12/337 (3%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+FD++++ R S F+ L+ A A + A S +NRM++ + P+L +
Sbjct: 36 LFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNL--CTY 93
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L+ + + +L+ F +L +G + + L+ + + E + +L +
Sbjct: 94 SILIGRFCRMG--HLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVG-EAMDVLLQ 150
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK----MEAY 377
M + G +L+ E E+A + L ++ D+G P V + +
Sbjct: 151 RMPELGCMPDTVSYTILLKGLCNEKRAEEALE-LLHMMADDHGRRCPPNVVSYSIVINGF 209
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
G+ K +F EM +R V Y +I+ LCKA+ + E + ++ ++ G KP
Sbjct: 210 FTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNN 269
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+Y L + YL++G + E + +P+ YG L L G +A F+
Sbjct: 270 YTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDS 329
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M + I + I++ Y + G + DLM
Sbjct: 330 M-IRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLM 365
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 160/410 (39%), Gaps = 35/410 (8%)
Query: 140 KWLRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDF----ALATKLADYMGKE 193
K LR + GTY L + ++ E E G E MM + F F A + L D + K+
Sbjct: 279 KGLRADVGTYCTLVLGLCKVEEFEAG----EEMMNE-MIEFGFVPSEAAVSNLVDGLRKK 333
Query: 194 RKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPR 253
D+ + + G PS ++ LI + G LDEA S++N M G + P
Sbjct: 334 GNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCK---DGKLDEAESLFNNMGHKGLF-PN 389
Query: 254 PSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
++ L + + L A + G++ YS LI H +
Sbjct: 390 DVTYSILIDSFCKRGK------LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRA 443
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
+ L EM G + + S++ KEG++ +A + + + T F
Sbjct: 444 AKS--LFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTAL 501
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ ++ ++F EM E + Y+ +IE CK T L+ E VE G+
Sbjct: 502 ISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSEC---------LEKCRPNRTIYGIYLESLKNA 484
P +Y L + + G ++ +E C PN Y + L
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKI 621
Query: 485 GNIEKAEEIFNHMHSDQTI-GVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G ++KAE + M + ++ NT +C L S G+ KA +++D++
Sbjct: 622 GLMDKAELLCREMLASNSLPNQNTYAC--FLDYLTSEGNIEKAIQLHDVL 669
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 110/261 (42%), Gaps = 23/261 (8%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYN-------RM 244
KE + ++ D+++ +G VP T+ LI S G + EA N ++
Sbjct: 542 KEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCST---GRVSEAREFMNDLQGEQQKL 598
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
++ G P + +L L K G + K AE + +L S ++ Y+ +
Sbjct: 599 NEIEGCLPNVVTYTALINGLC-KIGLMDK-----AELLCREMLASNSLPNQNTYACFLDY 652
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
+ + NI+K ++ ++ GF ++R K G +++A + + ++ D+G
Sbjct: 653 LTSEGNIEK---AIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMI--DSG 707
Query: 365 IPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
I Y + Y + G+ ++++++ M R + AY+ +I C E
Sbjct: 708 ISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAF 767
Query: 423 SLMKEFVETGMKPLMPSYINL 443
L + + G+KP +Y +L
Sbjct: 768 ELRDDMMRRGVKPNRATYNSL 788
>gi|297611745|ref|NP_001067799.2| Os11g0433600 [Oryza sativa Japonica Group]
gi|255680050|dbj|BAF28162.2| Os11g0433600, partial [Oryza sativa Japonica Group]
Length = 487
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 150/351 (42%), Gaps = 29/351 (8%)
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGG- 270
+PS T+ IL S G L++A + + M++ G P P ++ + V+ G
Sbjct: 32 LPSPTTYRILA---RSLAENGKLEQAIELKDGMLERGLVAPDPQVYALVMGGFVNAGDGD 88
Query: 271 -LSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
+ Y + E + + G+ +Y L+ + + ++KE + + +
Sbjct: 89 TVVSLYEELVEKLGGGQILDGM-----VYGNLMKGY-FLKGMEKEAMDCYAEVLG----- 137
Query: 330 EGKEVLLS------VLRVCAKEGDVEDAEKTWLRLLESDN-----GIPTPAFVYKMEAYA 378
EG +V VL + G ++DA + + R+ E + + +F ++AY
Sbjct: 138 EGSKVRFGAVSYNMVLDALGRNGKLDDALQLFDRMCEEHDPPRRIAVNLGSFNVMVDAYC 197
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
+ F ++E+F +M E+ + +Y+ +I+ L K E E L KE E G+ P
Sbjct: 198 RAERFQDAIEVFGKMGEKRCAPDALSYNNLIDWLGKNELVGEAEQLYKEMGERGVNPDEY 257
Query: 439 SYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+Y+ L Y + D F++ + RPN + + L +++A+ F+ M
Sbjct: 258 TYVLLIESYFKVDRVDDSVSYFNKMFVAGLRPNANAFNKVIGGLVKVDRLDEAQGFFDKM 317
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL 548
++ + N S ++L AY+ + A K+ + L + + S ++ L
Sbjct: 318 -PEKEVKPNIGSYELLLRAYIDAARLDDAIKMAKCILLDESVVFSDELKAL 367
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 135/313 (43%), Gaps = 18/313 (5%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
+GK + +F D+I G P + + LI G L+ ++ +M
Sbjct: 314 LGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKV---GRLEVTLKLFRKM---ES 367
Query: 250 YQPRPSL--HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
+Q +P++ +N++ +AL K +A F + G+ YS LI
Sbjct: 368 WQCKPNVVTYNTVIKALFE-----CKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCK 422
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+ I E+ LL +EM + GF S++ K E A + +L L E+
Sbjct: 423 TNRI--EKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSA 480
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGS-ASVPAYHKIIELLCKAEETELTESLMK 426
+ ++ + K G +++++F EM E+LGS V AY+ ++ + +A + +SL++
Sbjct: 481 RVYAVMIKHFGKCGRLSEAVDLFNEM-EKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLR 539
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAG 485
E G P + S+ + N G+ DR F++ +P+ Y L L +AG
Sbjct: 540 TMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAG 599
Query: 486 NIEKAEEIFNHMH 498
E+A ++ M+
Sbjct: 600 LFEEAAKLMREMN 612
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
KC+P T Y + LK G++EK EI+N M +D +T + + ++SA+ G +
Sbjct: 193 KCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDS 252
Query: 526 AEKIYDLM 533
A +++D M
Sbjct: 253 AIRLFDEM 260
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 78/182 (42%), Gaps = 3/182 (1%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
S++ + +EG +E + + + N P T + + A+ K+G + ++ +F EM+E
Sbjct: 203 SMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKE 262
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
+ Y ++ + K ++ E ++KE + G + +Y G D
Sbjct: 263 NGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDD 322
Query: 456 LHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
+ F + + + C+P+ + + L G +E ++F M S Q N + N ++
Sbjct: 323 AYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQC-KPNVVTYNTVI 381
Query: 515 SA 516
A
Sbjct: 382 KA 383
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 122/299 (40%), Gaps = 16/299 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ ++++ +G P+ T LI G + A ++ ++++ Y+P + +
Sbjct: 273 VLEEMVGKGLKPNVYTHTSLIDGLCKI---GWTERAFRLFLKLVKSSSYKPNVHTYTVMI 329
Query: 262 RALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
GG K L +AE + ++ GL + Y+ LI H + D R L
Sbjct: 330 -------GGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFD--RAFELM 380
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAK 379
+M+ GF +++ K+G ++ A K LR+ S P + + + K
Sbjct: 381 NKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKV-LRMATSQGLCPDKVTYTMLITEHCK 439
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
G +L++F +M E + Y II + C+ + E ++ L + + G+ P +
Sbjct: 440 QGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQT 499
Query: 440 YINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
Y ++ Y +G F ++ C P+ YG + L +E+A +F M
Sbjct: 500 YTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETM 558
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 123/294 (41%), Gaps = 16/294 (5%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+I E FR++ +++ Y+ + T + KE K A+ + ++ QG P+
Sbjct: 298 KIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNT 357
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY- 274
T+ LI + G D A + N+M +L G+ P +N++ GG K
Sbjct: 358 NTYTTLIDGHCRG---GSFDRAFELMNKM-KLEGFLPNIYTYNAII-------GGFCKKG 406
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
+QQA + + GL K Y+ LI H Q +I L +M + +
Sbjct: 407 KIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALD--LFNQMAENSCHPDIDT 464
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREM 393
+++ + ++ +E +++ + + L S +PT + + Y ++G+ +L++F M
Sbjct: 465 YTTIIAMYCQQRQMEQSQQLFDKCL-SIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERM 523
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
+ Y +I LCK E +L + ++ M P + + L Y
Sbjct: 524 VQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEY 577
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 86/199 (43%), Gaps = 3/199 (1%)
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSAS 401
C +EG E+A+ + + + + A+ + G F +F M E +
Sbjct: 191 CCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPN 250
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
V Y ++ LCK + +++E V G+KP + ++ +L + +G +R F
Sbjct: 251 VVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFL 310
Query: 462 ECLEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
+ ++ +PN Y + + G + +AE + M +Q + NT + ++ +
Sbjct: 311 KLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRM-VEQGLAPNTNTYTTLIDGHCR 369
Query: 520 SGDFVKAEKIYDLMCLKKY 538
G F +A ++ + M L+ +
Sbjct: 370 GGSFDRAFELMNKMKLEGF 388
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 96/226 (42%), Gaps = 18/226 (7%)
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
QG + ++ RM+++G P P++ N + A V G + Y++QA + ++ G
Sbjct: 229 QGRFRDVPGLFGRMVEMG--NP-PNVVN--YTAWVD--GLCKRGYVKQAFHVLEEMVGKG 281
Query: 291 LEIQKDIYSGLIWLHSYQDNIDK----ER-ISLLKKEMQQAGFEEGKEVLLSVLRVCAKE 345
L+ ++ LI D + K ER L K ++ + ++ ++ KE
Sbjct: 282 LKPNVYTHTSLI------DGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKE 335
Query: 346 GDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
G + AE R++E T + ++ + + G F ++ E+ +M+ ++ Y
Sbjct: 336 GKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTY 395
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
+ II CK + + +++ G+ P +Y L + G
Sbjct: 396 NAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQG 441
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 146/366 (39%), Gaps = 62/366 (16%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ G VP TF+ LI +Y G D+A ++Y RM++ G P S +N++
Sbjct: 196 VFKEMKRAGFVPERDTFNTLISSYSRC---GSFDQAMAVYKRMLE-AGVNPDLSSYNAVL 251
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
AL GGL K Q+E + + + + Y L LH+Y + + ER+ L +
Sbjct: 252 AALAR--GGLWK----QSEKVLAEMKDGRCKPNELTYCSL--LHAYANGKEIERMCALAE 303
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDV-EDAEKTWLRLLES------------------- 361
E+ +G E + VLL L + + D+ + E+ +L L +
Sbjct: 304 EIY-SGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRR 362
Query: 362 -------------DNGIPTPAFVYK---MEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
G TP+ M Y++ F +S EI RE+ + + +Y
Sbjct: 363 QMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISY 422
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH-DRLHLAFSECL 464
+ +I C+ ++ E E+G P + +Y Y M + + +
Sbjct: 423 NTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIK 482
Query: 465 EKCRPNRTIYGIYLESLKNAGNIEKAEEIFN-------HMHSDQTIGVNTR-----SCNI 512
C+PN++ Y ++ ++A N H+ D+ ++ R SCNI
Sbjct: 483 HGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRKLDPHISMDEECRLSERMAKKCSCNI 542
Query: 513 ILSAYL 518
L+ L
Sbjct: 543 FLTIKL 548
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 77/398 (19%), Positives = 154/398 (38%), Gaps = 63/398 (15%)
Query: 204 DDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRA 263
+ ++ +G P T+ L+ + A G A I+ M G +P++ F A
Sbjct: 93 NQMVEKGIKPDVFTYTTLLSGFEKA---GKDKAAVQIFEEMRNEGC---KPNI--CTFNA 144
Query: 264 LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEM 323
L+ G K+ + +F ++ T + DI + L + N +S + KEM
Sbjct: 145 LIKMHGNRGKF--TEMMKVFEDIKT--FQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEM 200
Query: 324 QQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEF 383
++AGF ++ +++ ++ G + A + R+LE+ ++ + A A+ G +
Sbjct: 201 KRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLW 260
Query: 384 MKSLEIFREMQ------------------------ERLGSASVPAYHKIIE--------L 411
+S ++ EM+ ER+ + + Y IIE L
Sbjct: 261 KQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTL 320
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA--FSECLEKC-- 467
+ + +L + F+E + P L M G + A +C+++
Sbjct: 321 VLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGF 380
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
P+ T Y + + N E++EEI + + + I + S N ++ AY +G A
Sbjct: 381 TPSLTTYNSLMYMYSRSANFERSEEILREILA-KGIRPDIISYNTVIYAYCRNGRMRDAS 439
Query: 528 KIYDLM--------------CLKKYEIESAWMEKLDYV 551
++ M + Y +S ++E +D V
Sbjct: 440 RVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVV 477
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 142/342 (41%), Gaps = 18/342 (5%)
Query: 202 IFDDIINQGRVPSEMTF-HILIVAYLSAPVQGCLDEA---CSIYNRMIQLGGYQPRPSLH 257
+FD ++ R S + F H+L + + E+ S++NRMI+ + P L
Sbjct: 36 LFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTPDLC 95
Query: 258 N-SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERI 316
S+ + G L+ F +L SG + + + L+ + +E +
Sbjct: 96 TYSILIGCFCRMG-----RLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRL-REAM 149
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP----AFVY 372
+L K M + G ++L+ E E+A + L ++ G P ++
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALE-LLHMMADSQGRSCPPNVVSYAT 208
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
+ + G+ K+ +F EM +R +V Y +I+ LCKA+ + E + ++ ++ G
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSE-CLEKCRPNRTIYGIYLESLKNAGNIEKAE 491
+KP +Y L + YL++G + E +P+ YG L L N G +A
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
F+ M + I N I++ Y + G + + +LM
Sbjct: 329 FFFDSMIR-KGIKPNVAIYGILIHGYATKGALSEMHDLLNLM 369
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 147/376 (39%), Gaps = 22/376 (5%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M H + D L +Y+ + + R FD +I +G P+ + ILI Y +
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYAT--- 355
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G L E + N M++ G P + N +F A K + +A IF+ + G
Sbjct: 356 KGALSEMHDLLNLMVE-NGLSPDHHIFNIIFTAYAKKA------MIDEAMHIFNKMKQQG 408
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
L + LI +D + +M G V S++ E
Sbjct: 409 LSPDVVNFGALIDALCKLGRVDDAVLKF--NQMMNEGVAPNIFVFNSLVYGLCTVDKWEK 466
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKI---GEFMKSLEIFREMQERLGS-ASVPAYH 406
A++ + +L + GI P V+ + G+ MK+ + ++ ER+G+ V +Y
Sbjct: 467 AKEFYFEML--NQGI-RPDVVFFNTILCNLCTKGQVMKAQRLI-DLMERVGTRPDVISYT 522
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK 466
+I C + + + G+KP +Y L + Y G D + F E L
Sbjct: 523 TLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRN 582
Query: 467 -CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
P Y L L +A+E++ +M + N NIIL+ + +
Sbjct: 583 GITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK-QWNIWIYNIILNGLSKNNCVDE 641
Query: 526 AEKIYDLMCLKKYEIE 541
A K++ +C K +++E
Sbjct: 642 AFKLFQSLCSKDFQLE 657
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 101/252 (40%), Gaps = 12/252 (4%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T + D + K + + +F +I++G P T++ LI YLS G E +
Sbjct: 242 TTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSI---GKWKEVVRMLEE 298
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M G +P + SL L + ++A F F +++ G++ IY I
Sbjct: 299 M-SAHGLKPDCYTYGSLLNYLCNNG------RCREARFFFDSMIRKGIKPNVAIYG--IL 349
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+H Y + L M + G + + AK+ +++A + ++ +
Sbjct: 350 IHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGL 409
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
F ++A K+G ++ F +M + ++ ++ ++ LC ++ E +
Sbjct: 410 SPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKE 469
Query: 424 LMKEFVETGMKP 435
E + G++P
Sbjct: 470 FYFEMLNQGIRP 481
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 149/384 (38%), Gaps = 41/384 (10%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
IF+ + QG P + F LI A G +D+A +N+M+ G P + NSL
Sbjct: 400 IFNKMKQQGLSPDVVNFGALIDALCKL---GRVDDAVLKFNQMMN-EGVAPNIFVFNSLV 455
Query: 262 RAL--VSKPGGLSKYYLQ------QAEFIFHN-----LLTSG--LEIQKDI--------- 297
L V K ++Y + + + +F N L T G ++ Q+ I
Sbjct: 456 YGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515
Query: 298 -----YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
Y+ LI H ID+ SL M G + + ++L + G ++DA
Sbjct: 516 PDVISYTTLIGGHCLVGRIDEAAKSL--DVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAY 573
Query: 353 KTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
+ +L NGI Y + F ++ E++ M ++ Y+ I+
Sbjct: 574 GVFREMLR--NGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILN 631
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH-DRLHLAFSECLEKCRP 469
L K + L + + + ++ + G + D +HL + P
Sbjct: 632 GLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
+ Y + E+L G +E+ +++F+ M T N+R N ++ L GD +A
Sbjct: 692 DVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTP-NSRMLNALVRRLLHRGDITRAGAY 750
Query: 530 YDLMCLKKYEIESAWMEKLDYVLS 553
+ K + +E++ L +LS
Sbjct: 751 LSKLDEKNFSLEASTTAMLISLLS 774
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 135/317 (42%), Gaps = 16/317 (5%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T+L +GK + + + D++ G P + + L+ + G + + N
Sbjct: 307 TELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLM------NILGKVGRVEELTNV 360
Query: 244 MIQLGGYQPRPSL--HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
++G ++ P++ +N++ +AL SK ++ + F + + + YS L
Sbjct: 361 FSEMGMWRCTPTVVSYNTVIKALFE-----SKAHVSEVSSWFDKMKADSVSPSEFTYSIL 415
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
I + + + E+ LL +EM + GF S++ K E A++ + L E+
Sbjct: 416 IDGYCKTNRV--EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKEN 473
Query: 362 DNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
+ + + ++ + K G+ +++++F EM+ + V AY+ ++ + KA
Sbjct: 474 FGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEA 533
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLES 480
SL+++ E G + + S+ + N + G+ R F +P+ Y L
Sbjct: 534 NSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGC 593
Query: 481 LKNAGNIEKAEEIFNHM 497
+AG E+A + M
Sbjct: 594 FAHAGMFEEAARMMREM 610
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
Y K+G+ K+L++F EM+ S +V Y ++I+ L KA + K+ + G+ P
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPD 337
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESL-KNAGNIEKAEEIF 494
+ NL N+ +G + L FSE + +C P Y +++L ++ ++ + F
Sbjct: 338 VVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWF 397
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
+ M +D ++ + + +I++ Y + KA
Sbjct: 398 DKMKAD-SVSPSEFTYSILIDGYCKTNRVEKA 428
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 143/319 (44%), Gaps = 24/319 (7%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
K+ + + +F++++NQG P+ +TF++LI +G + EA + MIQ G P
Sbjct: 292 KWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCK---EGKVIEAKDLLEVMIQ-RGIVPNL 347
Query: 255 SLHNSLFRA--LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+NSL LV L A +F ++ + G E D+ + ++ Y
Sbjct: 348 LTYNSLIEGFCLVGD--------LNSARELFVSMPSKGCE--PDVICYTVLINGYCKTSK 397
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
E L M Q G + ++L + G V DA+K + + GIP ++Y
Sbjct: 398 VEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVM--KVYGIPGDLYIY 455
Query: 373 K--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
+ K G +++E+F +++ + ++ +I+ LCKA + E L ++ +
Sbjct: 456 GIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQ 515
Query: 431 TGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIE 488
++P + +Y + + + G + ++ F + +EK C P++ Y + + +E
Sbjct: 516 EELQPDVVTYNIMIHEFCRGGQVVKANILFQK-MEKNGCTPDKITYATLIRGFFESKKLE 574
Query: 489 KAEEIFNHM-HSDQTIGVN 506
K E+ + M D ++ VN
Sbjct: 575 KVVELLHMMVQRDVSLDVN 593
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 145/382 (37%), Gaps = 33/382 (8%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
G V ++++ Y D T L + E + +K +F + G P+ +T+ L
Sbjct: 150 GLAVMAGILRR-GYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTL- 207
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYL------ 276
+ C N I L +Q L++S + KP +S +
Sbjct: 208 -----------MKGLCRTGNISIALKLHQEM--LNDSSLYGINFKPVVISYSIIIDALCK 254
Query: 277 ----QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+A +F + G+ Y+ LI H + E L EM G +
Sbjct: 255 DRREDEARDLFEEMKVQGMTPTVISYTSLI--HGFCCGGKWEEAKRLFNEMVNQGVQPNV 312
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIF 390
++ V KEG V +A+ +++ GI Y +E + +G+ + E+F
Sbjct: 313 VTFNVLIDVLCKEGKVIEAKDLLEVMIQ--RGIVPNLLTYNSLIEGFCLVGDLNSARELF 370
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY-INLTNMYLN 449
M + V Y +I CK + E L ++ G +P + +Y LT ++
Sbjct: 371 VSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQG 430
Query: 450 LGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
+ D L + + IYGI+L L G + +A E+FN + S I ++
Sbjct: 431 GKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKS-YNIKLDIEC 489
Query: 510 CNIILSAYLSSGDFVKAEKIYD 531
N ++ +G A ++++
Sbjct: 490 FNCLIDGLCKAGKLETAWELFE 511
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 343 AKEGDVEDAEK-TWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
K G++ + + L+ N PTP +F + + AKI + + ++ +M+
Sbjct: 70 CKTGNITATQAFQFFHLMMYSN--PTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGI 127
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH- 457
S + ++ LC ++M + G +P + T + L M R+
Sbjct: 128 SPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGY---IPDIVTYTTLIKGLCMEHRISK 184
Query: 458 --LAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI-GVN 506
L F+ ++K C PN YG ++ L GNI A ++ M +D ++ G+N
Sbjct: 185 AALLFTR-MQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGIN 237
Score = 39.7 bits (91), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 34/189 (17%), Positives = 86/189 (45%), Gaps = 7/189 (3%)
Query: 349 EDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
ED + ++ PT ++ + + G++ ++ +F EM + +V ++
Sbjct: 258 EDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNV 317
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEK 466
+I++LCK + + L++ ++ G+ P + +Y +L + +G ++ L S +
Sbjct: 318 LIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG 377
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG--VNTRSCNIILSAYLSSGDFV 524
C P+ Y + + +E+A +++N M +G + ++ +L+ G
Sbjct: 378 CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQ---VGKRPDVKTYGALLTGLFQGGKVG 434
Query: 525 KAEKIYDLM 533
A+K++ +M
Sbjct: 435 DAKKLFGVM 443
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 105/517 (20%), Positives = 199/517 (38%), Gaps = 95/517 (18%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D T + + + +E + K +FD++++QG P+ +T++ L+ Y S+ G EA
Sbjct: 205 DVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSS---GKPKEAI 261
Query: 239 SIYNRMIQLGGYQPRPSLHNSL----------------FRALVSKP-------------G 269
I+ +M + G +P +N+L F ++V K G
Sbjct: 262 GIFRKMCR-DGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHG 320
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
++ YL Q + ++ +G + I++ LI ++ +D+ ++ K M+Q G
Sbjct: 321 YATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSK--MRQQGLH 378
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE---SDNGIPTPAFVYKMEAYAKIGEFMKS 386
+V+ + G V+DA + RL+ + NG+ ++ + A K + K+
Sbjct: 379 PNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDK---WDKA 435
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNM 446
E+ EM R + ++ ++ LCK +++ V ++ + +Y L +
Sbjct: 436 EELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDG 495
Query: 447 Y-LNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV 505
Y L+ + + L L+ +PN Y + G IE A +F M S GV
Sbjct: 496 YCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASK---GV 552
Query: 506 NTRSC--NIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPV 563
N + IL + A+++Y WM K +K P+
Sbjct: 553 NPGIVIYSTILHGLFQTRRIAAAKELY------------LWMIKCG---------IKLPI 591
Query: 564 SLNLSSEQRENLIGLLLGGLC---IESDEKRKRH---MIRFQFNENSRMHSVLRRYLYDQ 617
++L GLC D R H +I F +N + ++ L
Sbjct: 592 G----------TYNIILQGLCQNNCTDDALRMFHNLCLIDFHL-QNRTFNIMIDALLKGG 640
Query: 618 YHEWLHPSFKFWPKGRLVIPKLIHRWLTPRALAYWFM 654
H+ + + + L+ R L P + YW M
Sbjct: 641 RHD----------EAKDLFASLLARGLVPNVVTYWLM 667
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 148/335 (44%), Gaps = 27/335 (8%)
Query: 208 NQGRVPSEMTFHILIVAYLS-APVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVS 266
N G S+MT L+ L AP + +D I+ G Y S +L + L +
Sbjct: 196 NLGLAFSDMTVEDLLKIVLKLAPQEPAVDA--------IKQGLYYLDSSAMAALLKEL-A 246
Query: 267 KPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK-------ERISLL 319
K G YL++A IF L LE ++ S L L++Y I + R L
Sbjct: 247 KQG-----YLKRAVEIFDWL--RNLEPSHEL-SSLCDLYTYTTMISQCGSHQQLRRALEL 298
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAK 379
EM+ G + +++ VC K +++ A+ + ++LE + ++ Y K
Sbjct: 299 VAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVK 358
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
++ +++++ ++++ A V Y+ +I K+ + E + ++ + G+KP +
Sbjct: 359 RCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATT 418
Query: 440 YINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
Y L + Y G ++ F + + + C N Y + + + AG E A E+F+ MH
Sbjct: 419 YTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMH 478
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ N + N +++A G + KA ++++ M
Sbjct: 479 KE-NCKPNVVTFNSLIAACSHGGHWEKASELFEQM 512
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQ 394
+V+ C K G E A K + ++L + G+ A Y + AY K G+ K+LEIFR+M
Sbjct: 386 TVISACNKSGQPEQALKVYEKMLAA--GVKPSATTYTALISAYGKKGQVEKALEIFRDMI 443
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
R +V Y +I KA E+ L + MH
Sbjct: 444 RRGCERNVITYSSLISACEKAGRWEMALELFSK------------------------MHK 479
Query: 455 RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
E C+PN + + + + G+ EKA E+F M + + C +I
Sbjct: 480 ----------ENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLI- 528
Query: 515 SAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVL 552
+AY G + +A K ++ M + ++A L VL
Sbjct: 529 TAYERGGQWRRALKAFEQMQTQGCHPDAAVFNSLMEVL 566
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 111/288 (38%), Gaps = 50/288 (17%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCL-DEACSIYNRMIQLGGYQPRPSLHN 258
+D++ ++ +G P+ +T++ILI Y V+ C +EA + + ++ Q +N
Sbjct: 331 QDVYKQMLEEGCSPNLVTYNILIDVY----VKRCQWEEAVKVLD-TLEKQAIQAEVRTYN 385
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
++ A +K G +QA ++ +L +G++ Y+ LI +Y E+
Sbjct: 386 TVISA-CNKSG-----QPEQALKVYEKMLAAGVKPSATTYTALI--SAYGKKGQVEKALE 437
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA 378
+ ++M + G E S++ C K G E A
Sbjct: 438 IFRDMIRRGCERNVITYSSLISACEKAGRWEMA--------------------------- 470
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
LE+F +M + +V ++ +I E L ++ G KP
Sbjct: 471 --------LELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSI 522
Query: 439 SYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAG 485
+Y L Y G R AF + + C P+ ++ +E L +G
Sbjct: 523 TYCGLITAYERGGQWRRALKAFEQMQTQGCHPDAAVFNSLMEVLWQSG 570
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 167/377 (44%), Gaps = 52/377 (13%)
Query: 157 IRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEM 216
+ ++E +V+E M ++H R ++ T + MG+ K + +F+++I +G + +
Sbjct: 248 LAKDEKACQVFEDMKKRHCRRDEYTY-TIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVV 306
Query: 217 TFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN-SLFRALVSKPGGL---- 271
++ L+ + +D+A +++RM++ G RP+ + SL L+ G L
Sbjct: 307 GYNTLMQVLAKGKM---VDKAIQVFSRMVETGC---RPNEYTYSLLLNLLVAEGQLVRLD 360
Query: 272 -----SKYYLQQ------------------AEFIFHNLLTSGLEIQKDIYSGLI-WLHSY 307
SK Y+ Q A +F ++ + ++ ++D Y ++ L
Sbjct: 361 GVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGA 420
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
I E I +L K + + G + +V K + + ++ + P+
Sbjct: 421 GKTI--EAIEMLSK-IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDG---PS 474
Query: 368 P-AFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
P F Y + ++ ++GE +++ IF E++ + +Y+ +I L K + +
Sbjct: 475 PDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVR 534
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS---ECLEK-CRPNRTIYGIYLES 480
KE E G+ P + +Y L + G +R+ +A+S E L K C+PN Y I L+
Sbjct: 535 FKEMQEKGLNPDVVTYSTLMECF---GKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDC 591
Query: 481 LKNAGNIEKAEEIFNHM 497
L+ G +A ++++ M
Sbjct: 592 LEKNGRTAEAVDLYSKM 608
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 16/245 (6%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
++ +++ +G P T++ILI + +G + +A I+ M + G + + +L
Sbjct: 642 ELVEEMGGKGLAPDVFTYNILINGHCK---EGNVKKALEIFENMSRRG-VRATVVTYTAL 697
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
AL SK G +Q+ + +F + G+ +Y+ LI HS NID R +
Sbjct: 698 IYAL-SKKG-----QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID--RAFEIM 749
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
EM++ +++R G V++A K + E GI Y + Y+
Sbjct: 750 GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE--RGIQPDLVTYNTLISGYS 807
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
G+ +L I EM + + ++ Y+ +I+ LCK + + E+++KE VE G+ P
Sbjct: 808 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 867
Query: 439 SYINL 443
+YI+L
Sbjct: 868 TYISL 872
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 147/361 (40%), Gaps = 58/361 (16%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRV-PSEMTFHILIVAYLSAPVQGCLDEACSIYN 242
T +A + + R A DI ++ +G + P++ T+ +I + G +DEA +++
Sbjct: 519 TVIAGFCSRGRVQAAL-DIMREMRERGGIAPNQYTYGTVISGWCKV---GRVDEAVKVFD 574
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
M+ G +P ++N+L G + L A ++ G+ + Y+ L+
Sbjct: 575 EMLTKGEVKPEAVMYNALIG------GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 628
Query: 303 WLHS-YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
H+ + D E L+ +EM GK
Sbjct: 629 --HALFMDGRGTEAYELV-EEMG------GK----------------------------- 650
Query: 362 DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
G+ F Y + + K G K+LEIF M R A+V Y +I L K + +
Sbjct: 651 --GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 708
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGIY 477
T+ L E V G++P + Y L N + G DR E +EK R P+ Y
Sbjct: 709 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE-MEKKRIAPDDVTYNTL 767
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
+ L G +++A ++ + M +++ I + + N ++S Y GD A +I + M K
Sbjct: 768 MRGLCLLGRVDEARKLIDEM-TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 826
Query: 538 Y 538
+
Sbjct: 827 F 827
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 126/300 (42%), Gaps = 18/300 (6%)
Query: 202 IFDDIINQGRV-PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
+FD+++ +G V P + ++ LI Y QG LD A +RM++ G + +N L
Sbjct: 572 VFDEMLTKGEVKPEAVMYNALIGGYCD---QGKLDTALLYRDRMVERG-VAMTVATYNLL 627
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
AL G Y L + GL Y+ LI H + N+ K+ + + +
Sbjct: 628 VHALFMDGRGTEAYEL------VEEMGGKGLAPDVFTYNILINGHCKEGNV-KKALEIFE 680
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
M + G +++ +K+G V++ +K + + GI +Y + +++
Sbjct: 681 N-MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR--RGIRPDLVLYNALINSHS 737
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
G ++ EI EM+++ + Y+ ++ LC + L+ E E G++P +
Sbjct: 738 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLV 797
Query: 439 SYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+Y L + Y G + D L + + P Y ++ L G + AE + M
Sbjct: 798 TYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 857
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 7/203 (3%)
Query: 357 RLLESDNGIPTP-AFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVP-AYHKIIELL 412
R LE +P P A Y + + G +L+I REM+ER G A Y +I
Sbjct: 501 RALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 560
Query: 413 CKAEETELTESLMKEFVETG-MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPN 470
CK + + E + G +KP Y L Y + G D L +E+
Sbjct: 561 CKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMT 620
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
Y + + +L G +A E+ M + + + + NI+++ + G+ KA +I+
Sbjct: 621 VATYNLLVHALFMDGRGTEAYELVEEMGG-KGLAPDVFTYNILINGHCKEGNVKKALEIF 679
Query: 531 DLMCLKKYEIESAWMEKLDYVLS 553
+ M + L Y LS
Sbjct: 680 ENMSRRGVRATVVTYTALIYALS 702
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 107/229 (46%), Gaps = 16/229 (6%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D + +G PS +TF++L+ Y A G + A +N+M + G+QP +N L
Sbjct: 165 LLDMMRTEGTRPSIITFNLLVDGYGKA---GKMSNALPFFNQM-KAAGFQPSAVTYNMLI 220
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
G + +A ++ GLE K Y+ LI + ++++ K +L
Sbjct: 221 ------AGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKA-FEILAG 273
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME--AYAK 379
M++AG E ++R EG+++DA K + + E G+ +Y M Y +
Sbjct: 274 -MEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGE--KGVEPSNVIYDMMIYGYGR 330
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
G K+L++ EM+++ + +Y I +LCK ++ + E+L+ +
Sbjct: 331 EGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDM 379
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 122/325 (37%), Gaps = 56/325 (17%)
Query: 178 FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEA 237
D T L + K A+ R +FD++ G P+E+T+ L+ Y + G ++
Sbjct: 36 LDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFT---HGQREKG 92
Query: 238 CSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI 297
+++ M + GG +P +N L + + EF
Sbjct: 93 FALFEEM-RRGGVEPNLYTYNCLI-----------GEWCRTGEF---------------- 124
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
ER L EM G +++ + G + DA K L
Sbjct: 125 ----------------ERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAK-LLD 167
Query: 358 LLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
++ ++ P+ F ++ Y K G+ +L F +M+ S Y+ +I C+A
Sbjct: 168 MMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRAR 227
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS--ECLEKC--RPNRT 472
+ + + E G++P +Y L + + + + AF +EK +
Sbjct: 228 DMTRANRALSDMKERGLEPTKVTYTILIDSFAR---ENHMGKAFEILAGMEKAGLEVDAH 284
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHM 497
YG+ + +L GN++ A ++F M
Sbjct: 285 TYGVLVRALCMEGNMKDARKLFQSM 309
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 154/357 (43%), Gaps = 16/357 (4%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D + L + GK + K ++ ++ + G P ++++L+ A+ + G + EA
Sbjct: 44 DITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQS---GSIKEAM 100
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
++ R +Q G P + + S+ L + G +Y +F + S E Y
Sbjct: 101 GVF-RQMQGAGCVPNAATY-SILLNLYGRHG---RY--DDVRDLFLEMKVSNTEPNAATY 153
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+ LI + + KE ++L +M + E E ++ C K G EDA+K L +
Sbjct: 154 NILINVFG-EGGYFKEVVTLFH-DMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHM 211
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
E + A+ +EAY + + ++L F M E +V Y+ +I++ K
Sbjct: 212 NEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLY 271
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGI 476
+ +E+++ + ++G+ ++ + + G + A+ E +EK C P+
Sbjct: 272 KESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVE-MEKARCDPDEQTLEA 330
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
L AG +E++EE F + + + C ++L+ Y + + A ++ D M
Sbjct: 331 VLSVYCFAGLVEESEEQFGEIKALGILPSVMCYC-MMLAVYAKADRWDDAHQLLDEM 386
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 1/176 (0%)
Query: 323 MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGE 382
M+ G + ++L CA+ G ++AE + + E + Y +E + K+
Sbjct: 1 MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNR 60
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
K E+ +EM+ + +Y+ ++E ++ + + ++ G P +Y
Sbjct: 61 LEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSI 120
Query: 443 LTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
L N+Y G +D + F E + PN Y I + G ++ +F+ M
Sbjct: 121 LLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDM 176
>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 674
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 147/360 (40%), Gaps = 49/360 (13%)
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG 269
G P+ +T+ +L+ + +A ++EA + RM + G S + +R+LV G
Sbjct: 245 GIRPNVVTYTMLVDGFCNASR---VEEAVCVLERMKEKG-----VSATEATYRSLVH--G 294
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
++A + + S + Y L++ S D +DKE + L KK M + G+
Sbjct: 295 AFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKND-MDKEAVELAKK-MSKRGYL 352
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEI 389
G V+ K + D + ++ + ++ ++++ + + K+ +
Sbjct: 353 LGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKY 412
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
F +M +SV +Y+ +I+ KA E E +K E+G P + ++ L N YL
Sbjct: 413 FSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLK 472
Query: 450 LG-MHDRLHL----------------------------------AFSECLE-KCRPNRTI 473
LG +HD FSE E RPN
Sbjct: 473 LGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQT 532
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
Y + + L +AG++ KA E+ N M D I + S N + ++ KA+K+++ M
Sbjct: 533 YNVLIHGLCSAGHVSKAIELLNKMKMDG-ITPDAYSFNAPILSFCRMRKIEKAQKLFNDM 591
>gi|302761110|ref|XP_002963977.1| hypothetical protein SELMODRAFT_82002 [Selaginella moellendorffii]
gi|300167706|gb|EFJ34310.1| hypothetical protein SELMODRAFT_82002 [Selaginella moellendorffii]
Length = 716
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 138/318 (43%), Gaps = 34/318 (10%)
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG 269
G + +TF+++I Y A V+ LD+ I + M P + NSL A V
Sbjct: 260 GVKANTLTFNVMIKLY--ARVEK-LDKLEQILHTMAD-ADVDPDATTFNSLVAAFV---- 311
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
GL + L AE I +L G E Q + + L L + A F+
Sbjct: 312 GLGELSL--AESIVQSLRGEG-EHQTRVPALLPKLREHS-----------------AKFQ 351
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKS 386
++++ + V DA + + + + P F + A AK+G ++
Sbjct: 352 PDVRTYTTLMKGYVQHNRVSDAMQLLVAMQQEKTSAAMPNEVTFTTAIRACAKMGLLDEA 411
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL--MKEFVETGMKPLMPSYINLT 444
I +EM + +A+V Y+ +++ +C T++ +L +++ E G++ + SY L
Sbjct: 412 RVILQEMATQKVAANVVTYNTLLQGVCVFPITDMKRALEIVEDMKEAGVELDVVSYNTLI 471
Query: 445 NMYLNLGMHDRLHLAFSECLEKCRP-NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
N YL G +++ AF+ E P ++ YG +++ +G E ++F M D +
Sbjct: 472 NGYLEAGDNEQALAAFTRMREAKVPASKVTYGTLMKAFARSGRTELVVKVFTQMALDPRV 531
Query: 504 GVNTRSCNIILSAYLSSG 521
V+ + N ++ AY +G
Sbjct: 532 RVDVVAWNTLIDAYARAG 549
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 122/274 (44%), Gaps = 21/274 (7%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ TF +I + A G + A I++ M++ G P +N+L LV K
Sbjct: 552 PTTRTFLPIIHGFARA---GEMRRALEIFD-MMRRSGCIPTVHTYNALILGLVEK----- 602
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK--ERISLLKKEMQQAGFEE 330
+ +A I + +G+ + Y+ L+ ++ + +K + S+L+ E G E
Sbjct: 603 -RKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNE----GLEI 657
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLE 388
++L+ C K G ++ A + S IP FVY + + +A+ G+ ++ +
Sbjct: 658 DVYTYEALLKSCCKSGRMQSALAVTKEM--SAKNIPRNTFVYNILIDGWARRGDVWEAAD 715
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+ ++M++ + Y + CKA + + +++E G+KP + +Y L N +
Sbjct: 716 LMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWA 775
Query: 449 NLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESL 481
M ++ F E L + +P++ Y + SL
Sbjct: 776 RASMPEKALSCFEEMKLAELKPDKAAYHCLMTSL 809
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 135/350 (38%), Gaps = 16/350 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ Y + R F+ + +G PS + LI AY V ++EA +M
Sbjct: 280 MVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYA---VGRDMEEALHCVRKMK 336
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
+ G + + +V GG +K A+ F + Y +I+
Sbjct: 337 EEG-----IEMTIVTYSIIV---GGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYA 388
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
H N+D R L +EM+ G + ++ +++ G+ E + RL E
Sbjct: 389 HCQTCNMD--RAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFS 446
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
++ + Y KIG+ K+L+I + M+ ++ Y +I K ++ S+
Sbjct: 447 PSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSV 506
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKN 483
++F + G+KP + Y N+ + + DR + E+ RP + +
Sbjct: 507 FEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFAR 566
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
AG + +A EIF+ M I + N ++ + KA I D M
Sbjct: 567 AGEMRRALEIFDMMRRSGCIPT-VHTYNALILGLVEKRKMAKAVAILDQM 615
>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 683
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 149/360 (41%), Gaps = 49/360 (13%)
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG 269
G P+ +T+ +L+ + +A ++EA + RM + G S + +R+LV G
Sbjct: 245 GIRPNVVTYTMLVDGFCNASR---VEEAVCVLERMKEKG-----VSATEATYRSLVH--G 294
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
++A + + S + Y L++ S ++++DKE + L KK M + G+
Sbjct: 295 AFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLS-KNDMDKEAVELAKK-MSKRGYL 352
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEI 389
G V+ K + D + ++ + ++ ++++ + + K+ +
Sbjct: 353 LGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKY 412
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
F +M +SV +Y+ +I+ KA E E +K E+G P + ++ L N YL
Sbjct: 413 FSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLK 472
Query: 450 LG-MHDRLHL----------------------------------AFSECLE-KCRPNRTI 473
LG +HD FSE E RPN
Sbjct: 473 LGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQT 532
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
Y + + L +AG++ KA E+ N M D I + S N + ++ KA+K+++ M
Sbjct: 533 YNVLIHGLCSAGHVSKAIELLNKMKMDG-ITPDAYSFNAPILSFCRMRKIEKAQKLFNDM 591
>gi|225432159|ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic [Vitis vinifera]
Length = 498
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 159/373 (42%), Gaps = 19/373 (5%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
V+E + +Q +Y+ KL +GK + + ++FD ++ +G P+ + L+
Sbjct: 127 ALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTELYTALL 186
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
+Y + + +DEA SI N+M L QP +++L +A V S++ L ++ +
Sbjct: 187 ASYCRSNL---IDEAFSILNQMKTLPRCQPDVFTYSTLLKACVD----ASRFELVESLYE 239
Query: 283 FHNL--LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
++ +T Q + SG + D ++K +L ++ + + ++L
Sbjct: 240 EMDVRSITPNTVTQNIVLSGYGKAGKF-DEMEK----VLSGMLESTSSKPDVWTMNTILS 294
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
+ +G +E EK + + T F + AY K + K + M++
Sbjct: 295 LFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
+ Y+ +IE + + E + GMK ++ L Y N G+ ++ +
Sbjct: 355 TTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSV 414
Query: 461 SECLEKCRP-NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
+ P N + Y + + A ++ + E +FN M D+ ++ + +I++ AY
Sbjct: 415 QLAGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRMK-DKHCQPDSTTYSIMVEAYKK 473
Query: 520 SGDFVKAEKIYDL 532
G +KIYDL
Sbjct: 474 EG---MNDKIYDL 483
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 137/308 (44%), Gaps = 17/308 (5%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D KE K A+ DI ++I+ G P+++ + LI G L A + MI
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKI---GQLGRASKLLKEMI 410
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
++G +P +N L + G ++ A + + + SG I ++YS I ++
Sbjct: 411 KVG-LRPDTFTYNPLMQ------GHFQQHDKDGAFELLNEMRNSG--ILPNVYSYGIMIN 461
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
N + + L +EM G + + ++ +KEG++ A + ++ +++ +
Sbjct: 462 GLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKAN--V 519
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
F Y ++ + +G ++ E + ++Q+R Y +I CK E +
Sbjct: 520 HPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQ 579
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLK 482
L+++ + +G+KP +Y +L Y ++++ L +P+ IYGI + +L
Sbjct: 580 LLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLS 639
Query: 483 NAGNIEKA 490
+ N+E A
Sbjct: 640 RSENMEVA 647
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 151/345 (43%), Gaps = 26/345 (7%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K R F + +F+++ + +E+T++++I + G ++EA M+ G
Sbjct: 255 KARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRS---GAVEEAFGFKEEMVDY-GLS 310
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P + +L L L++A+ + + SGL+ +Y L+ ++
Sbjct: 311 PDAFTYGALMNGLCKGS------RLKEAKALLDEMSCSGLKPNIVVYGTLVD-GFMKEGK 363
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
E +L KEM AG + K + +++R K G + A K +++ G+ F
Sbjct: 364 TAEAFDIL-KEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKV--GLRPDTFT 420
Query: 372 YK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
Y M+ + + + + E+ EM+ +V +Y +I LC+ E++ +L++E +
Sbjct: 421 YNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMI 480
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-----CRPNRTIYGIYLESLKNA 484
G+KP Y L + G + LA E LEK P+ Y ++ L
Sbjct: 481 SEGLKPNAFMYAPLIIGHSKEG---NISLA-CEALEKMTKANVHPDLFCYNSLIKGLSTV 536
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
G +E+AEE + + + + + + ++ Y +G+ KA+++
Sbjct: 537 GRMEEAEEYYAQVQKRGLV-PDEFTYSGLIHGYCKTGNLEKADQL 580
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 9/142 (6%)
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
GI + Y +EA+ K +F + ++F EM+ R + + Y+ +I LC++ E
Sbjct: 238 GILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 297
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KC---RPNRTIYGIY 477
+E V+ G+ P +Y L N L RL A + E C +PN +YG
Sbjct: 298 FGFKEEMVDYGLSPDAFTYGALMN---GLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTL 354
Query: 478 LESLKNAGNIEKAEEIFNHMHS 499
++ G +A +I M S
Sbjct: 355 VDGFMKEGKTAEAFDILKEMIS 376
>gi|449444598|ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Cucumis sativus]
Length = 1062
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 140/359 (38%), Gaps = 57/359 (15%)
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
R D A+ L GKERK + ++ + N S + F +I AY+ +E
Sbjct: 667 RLDDAIIASLISLYGKERKINQAAEVLAAVANS--CTSTLIFGSMIDAYIKCDKA---EE 721
Query: 237 ACSIYNRMIQLG---GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
A ++Y +I+ G G + N+L GG + AE + L GLE+
Sbjct: 722 ASTLYKELIEKGYDLGAVAVSRIVNTL------TVGGKHRV----AENVVRASLNCGLEL 771
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
++ I +A E GK + A +
Sbjct: 772 DTVAFNTFI----------------------KAMLEGGK---------------LHFASR 794
Query: 354 TWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
+ ++ + + Y + + K++E+F + S AY +I
Sbjct: 795 IYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVEMFNAARSSGLSPDEKAYTNLISCYG 854
Query: 414 KAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL-HLAFSECLEKCRPNRT 472
KA +T L KE +E G+KP M SY + N+Y N G+H+ +L + + P+
Sbjct: 855 KAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETENLLKAMEQDAIVPDSF 914
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
Y + + + +AE+I N M ++ I +++LSA +G KAE++YD
Sbjct: 915 TYFSLIRAYTQSCKYSEAEKIINSMQ-EKGIPTTCAHYDLLLSALAKAGMIRKAERVYD 972
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 154/365 (42%), Gaps = 44/365 (12%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K R+ + D+ ++ +G P+ +T+ LI + +G LD+A S Y M + G
Sbjct: 589 KSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCK---EGMLDKAFSSYFEMTENG--- 642
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLE------IQKDIYSGLIWLH 305
S + + +VS L + + +A + ++ G ++ DI I
Sbjct: 643 --LSANIIICSTMVSGLYRLGR--IDEANLLMQKMVDHGFFPDHECFLKSDIRYAAI--Q 696
Query: 306 SYQDNIDKE-RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
D++D+ + LL + +++ +C K G V+DA + + L S G
Sbjct: 697 KIADSLDESCKTFLLPNNIVYN---------IAIAGLC-KTGKVDDARRFFSML--SLKG 744
Query: 365 IPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
F Y + Y+ G ++ + EM R ++ Y+ +I LCK+E + +
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 804
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESL 481
L + + G+ P + +Y L + Y +G M L E P+ Y + L
Sbjct: 805 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTR---SCNIILSAYLSSGDFVKAEKIYDLM---CL 535
G+IE++ ++ N M GV+++ C ++ Y+ SG+ K K+YD+M CL
Sbjct: 865 CKHGDIERSMKLLNQMIK---AGVDSKLIEYCTLV-QGYIRSGEMQKIHKLYDMMHIRCL 920
Query: 536 KKYEI 540
I
Sbjct: 921 STTAI 925
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 13/220 (5%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K K R F + +G VP T+ LI Y +A G +DEA + + M++ G
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAA---GNVDEAFRLRDEMLRRG-LV 781
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P +N+L L + +A+ +FH L GL Y+ LI + N+
Sbjct: 782 PNIVTYNALINGLCKSEN------VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNM 835
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
D LK +M + G +++ K GD+E + K +++++ +
Sbjct: 836 DAA--FKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYC 893
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
++ Y + GE K +++ M R S + + HK ++L
Sbjct: 894 TLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAIS-HKQVDL 932
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 168/407 (41%), Gaps = 51/407 (12%)
Query: 157 IRENET---GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIIN----- 208
+R N T GF ++++ +Q +R + KL + + R + + R + +++
Sbjct: 78 LRLNPTASLGF--FQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFK 135
Query: 209 -QGRVP-------------SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
+G V S F +++ Y+ +G A +++ M + G P
Sbjct: 136 DRGNVIWDELVGVYREFAFSPTVFDMILKVYVE---KGLTKNALYVFDNMGKCGRI---P 189
Query: 255 SLH--NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
SL NSL LV K G A +++ ++ G I D++ I ++++ +
Sbjct: 190 SLRSCNSLLNNLV-KNG-----ETHTAHYVYQQMIRVG--IVPDVFMVSIMVNAFCKDGK 241
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
+ + K+M+ G E S++ GDVE A K L+ + S+ G+ Y
Sbjct: 242 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE-AAKGVLKFM-SEKGVSRNVVTY 299
Query: 373 KM--EAYAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTESLMKE 427
+ + Y K + ++ ++ R MQE +A VP AY +I+ C+ + + L+ E
Sbjct: 300 TLLIKGYCKQCKMDEAEKVLRGMQEE--AALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357
Query: 428 FVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGN 486
+ G+K + +L N Y G +H+ + +P+ Y L+ G+
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+A + + M + I + N +L G F A +I+ LM
Sbjct: 418 TSEAFNLCDKMLQ-EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLM 463
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 125/314 (39%), Gaps = 25/314 (7%)
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL 271
VP E + +LI Y G +D+A + + M++LG L +LF G
Sbjct: 329 VPDERAYGVLIDGYCRT---GKIDDAVRLLDEMLRLG-------LKTNLFICNSLINGYC 378
Query: 272 SKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEE 330
+ + +AE + ++ L + D YS L Y ++ E +L K M Q G E
Sbjct: 379 KRGEIHEAEGVITRMVDWNL--KPDSYSYNTLLDGYCREGHTSEAFNLCDK-MLQEGIEP 435
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIF 390
++L+ + G +DA + W +++ + ++ K+ F + ++
Sbjct: 436 TVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLW 495
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL-- 448
+++ R + S ++ +I LCK + E + + + G P +Y L + Y
Sbjct: 496 KDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKA 555
Query: 449 -NLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
N+G ++ A E P+ +Y + L + + + ++ M G+
Sbjct: 556 SNVGQAFKVKGAMER--EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEM------GIRG 607
Query: 508 RSCNIILSAYLSSG 521
+ NI+ L G
Sbjct: 608 LTPNIVTYGALIDG 621
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 104/228 (45%), Gaps = 8/228 (3%)
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ +++QA+ F + +E+ + + I + + D D L +EM++ G
Sbjct: 171 RKHVKQAQEFFDKV---NVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDV 227
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIF 390
S+L K G+V++A K + + NG+ A Y + AY ++ + + ++
Sbjct: 228 VAYNSLLEALCKGGNVDEAYKLFREM--GSNGLAPDACSYSIFIRAYCEVNDIHSAFQVL 285
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN- 449
M+ +V Y+ I++ LCK+E+ + L+ E +E G+ P + SY + + +
Sbjct: 286 DRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDH 345
Query: 450 LGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
++ L L E C P+R Y + L+ L G ++ +++ M
Sbjct: 346 CEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGM 393
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 167/392 (42%), Gaps = 83/392 (21%)
Query: 175 WYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCL 234
W + F T L + K++K + +FD +I+ +P+E+TF+++I Y + G +
Sbjct: 499 WNNYTF---TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYC---LVGNI 552
Query: 235 DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK---PGGLSKYY-----LQQAEFIFHNL 286
+A +Y++M+++G +P N +R+L+S G+SK L+ + + +N
Sbjct: 553 RKAFQLYDQMVEMG-LKP----DNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNF 607
Query: 287 LTSGL-----------------------EIQKDIYSGLIWLHSYQDNIDKERISLLKKEM 323
+ L ++ D+ S I +++ DKE+ +L +EM
Sbjct: 608 SLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 667
Query: 324 QQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL------------------------- 358
++ G + ++ +KE ++ A W ++
Sbjct: 668 KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYL 727
Query: 359 ---------LESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM-QERLGSASVPAYH 406
+ + N +P F Y ++ +A G+ K+ ++ M Q L AS+ +++
Sbjct: 728 GSAELLCKEMLAGNVLPN-KFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL--ASIVSFN 784
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK 466
+I+ LCKA + + LM + E+G P SY + + +G ++ ++E L K
Sbjct: 785 ILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 844
Query: 467 -CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+P+ Y I++ G +KA I+ +M
Sbjct: 845 GLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 876
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 145/358 (40%), Gaps = 26/358 (7%)
Query: 183 ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYN 242
A+++ + K R+FA RD+FD ++ G E + I AY + LD A +
Sbjct: 189 ASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRN---LDGARGLVV 245
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
RM + G + +N L L +Q+A + + ++ G+ + Y L+
Sbjct: 246 RM-ESEGVKASAVPYNVLMYGLCKN------MRVQEAVEVKNVMVNIGVTADEVTYRTLV 298
Query: 303 WLHSYQDNIDKE-RISLLKKEMQQAGF---EEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+ + ++ RI+ +M + GF E ++ LR K+ VE+A +L
Sbjct: 299 YGFCRMEELEMALRIT---HDMIRLGFVPSEANCSFMIDELR---KKELVEEAFSLACKL 352
Query: 359 LESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
D G+ F Y ++ K F + +F+EM R + Y +I LCK
Sbjct: 353 --GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 410
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYG 475
E L + + G+K + Y +L N Y G DR S + E P Y
Sbjct: 411 MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 470
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ L G++ E+ M +++ I N + +++ + +A +++D M
Sbjct: 471 PLIAGLCRNGDLSSCMELHREM-AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM 527
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 74/182 (40%), Gaps = 5/182 (2%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEA 376
L KEM G E + ++ K G +EDA + ++ D GI + Y +
Sbjct: 383 LFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKM--RDKGIKVTVYPYNSLING 440
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
Y K G ++ + M + + + +Y +I LC+ + L +E E G+
Sbjct: 441 YCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWN 500
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
++ L N + D F + ++ PN + + +E GNI KA ++++
Sbjct: 501 NYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYD 560
Query: 496 HM 497
M
Sbjct: 561 QM 562
Score = 39.3 bits (90), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 98/234 (41%), Gaps = 13/234 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ QG P ++ F+ ++ LS + + +A + +++M+ + GY P H L
Sbjct: 663 LFREMKEQGVKPDDI-FYTCMIDALSK--EENMIQALNCWDQMV-VDGYSPNTVTHTVLI 718
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L K G YL AE + +L + K Y+ +L + D E+ L
Sbjct: 719 NNLC-KSG-----YLGSAELLCKEMLAGNVLPNKFTYN--CFLDYFATEGDMEKAKDLHS 770
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
M Q + + +C K G +++A ++ ES ++ + K+G
Sbjct: 771 AMLQGHLASIVSFNILIKGLC-KAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMG 829
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ K+ E++ EM + V AY+ I E++ + + +G++P
Sbjct: 830 DINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQP 883
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 131/340 (38%), Gaps = 49/340 (14%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
+CRD D++I GR+P +T++ I A G LD+ + M + GG P
Sbjct: 171 ECRD-GDEMIESGRIPDVVTYNTFISGLCKA---GKLDKGLEMLEEMDR-GGIPPDVVTF 225
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
S+ L + A +F +L G YS ++ S + +D
Sbjct: 226 CSIISGLCKAN------RIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEV 279
Query: 318 LLKKEMQQAG--------------------FEEGKEVLLS---------------VLRVC 342
L + +AG F K +LL V+
Sbjct: 280 LEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGL 339
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM-EAYAKIGEFMKSLEIFREMQER-LGSA 400
K G+V+DA K ++L+S P F + + K G ++ ++ EM+ + +
Sbjct: 340 CKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVP 399
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
V Y+ +I+ K + + L++E G KP + +Y L N Y GM++ F
Sbjct: 400 DVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLF 459
Query: 461 SECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
E K C P+ Y L + AG + KAE ++ + +
Sbjct: 460 DEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKN 499
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 106/245 (43%), Gaps = 16/245 (6%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
+ KF ++I +I G +P+ ++++ +I + G +D+A + +M+ G +
Sbjct: 306 RSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKS---GNVDDAWKLSRKMLDSGCCK 362
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P N+L K G LS+ + E N+ + + G S +
Sbjct: 363 PDVIFFNTLISGFC-KAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLK--- 418
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
+ LL +EMQ G + +++ AK G E+AE + + S G
Sbjct: 419 ---QAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEM--SAKGCFPDIIT 473
Query: 372 YK--MEAYAKIGEFMKSLEIFREMQERLGSASVPA--YHKIIELLCKAEETELTESLMKE 427
Y + A++K G K+ ++++++ + S A Y +I+ C+AE+TE +L++E
Sbjct: 474 YNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQE 533
Query: 428 FVETG 432
G
Sbjct: 534 MTARG 538
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 5/144 (3%)
Query: 391 REMQERLGSASVP---AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
R+ E + S +P Y+ I LCKA + + +++E G+ P + ++ ++ +
Sbjct: 173 RDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGL 232
Query: 448 LNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV- 505
D F LE+ C P+ Y I L++L A ++ +E+ HM + + V
Sbjct: 233 CKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVM 292
Query: 506 NTRSCNIILSAYLSSGDFVKAEKI 529
+ N + A SG F A+ I
Sbjct: 293 EVYTHNAFIGALCRSGKFPLAKNI 316
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 144/370 (38%), Gaps = 64/370 (17%)
Query: 203 FDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFR 262
FD++I++G P+ +T+ LI Y + +G +A +YN M G S + F
Sbjct: 285 FDEMIDKGLTPTVVTYTSLISGYCN---EGEWHKAFKVYNEMTAKG-----ISPNTYTFT 336
Query: 263 ALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKE 322
A++S G + +A +F + + + Y+ +I H NI E LL E
Sbjct: 337 AIIS--GLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNI-SEAFHLLD-E 392
Query: 323 MQQAGFEEGKEV-------LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME 375
M GF L SV RV + V+D K +L N + A V+
Sbjct: 393 MVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKL----NNMCYSALVH--- 445
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
Y K G F ++ R M ER + + Y +I+ + +T L+KE G++P
Sbjct: 446 GYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRP 505
Query: 436 --------------------------------LMP---SYINLTNMYLNLGMHDRLHLAF 460
+P +Y L N G+ D+ L
Sbjct: 506 DAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLS 565
Query: 461 SECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
E L PN YG +L+ L GN+EKA ++ + M + T S NI++ +
Sbjct: 566 KETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAML--KGFLATTVSYNILIRGFCR 623
Query: 520 SGDFVKAEKI 529
G +A K+
Sbjct: 624 LGKIEEATKL 633
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 73/166 (43%), Gaps = 2/166 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
++++ + GE ++ +M + +V Y+ +I CK + E ++ G+
Sbjct: 234 IDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGL 293
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEE 492
P + +Y +L + Y N G + ++E K PN + + L A + +A
Sbjct: 294 TPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIR 353
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKY 538
+F M ++ I + + N+++ + SG+ +A + D M K +
Sbjct: 354 LFGEM-KERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGF 398
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 2/154 (1%)
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G+F ++ +F+EM E+ A+ Y +I+ C+ E + + + + ++ + Y
Sbjct: 206 GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPY 265
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+L N Y LG F E ++K P Y + N G KA +++N M +
Sbjct: 266 NSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEM-T 324
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ I NT + I+S + +A +++ M
Sbjct: 325 AKGISPNTYTFTAIISGLCRANMMAEAIRLFGEM 358
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 143/310 (46%), Gaps = 21/310 (6%)
Query: 233 CLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLE 292
C+D+A + + RM+++ PRPS V + G + ++ ++ L + ++
Sbjct: 73 CVDDALASFYRMVRI---NPRPS---------VVEFGKFLGSFAKKKQYSTVVSLCNQMD 120
Query: 293 ---IQKDIYSGLIWLHSY--QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGD 347
+ ++YS I ++ +++D +S+L K M + G +++ EG
Sbjct: 121 LFRVTHNVYSLNILINCLCRLNHVDFS-VSVLGK-MFKLGIHPDAITFNALINGLCNEGK 178
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
+++A + + +++ + ++ + K G ++++F++M++ +V Y
Sbjct: 179 IKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYST 238
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK- 466
II+ LCK + E VE G+ P + +Y ++ + + NLG + F E + +
Sbjct: 239 IIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD 298
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
PN + I ++ L G + +A +F M +++ + + + N ++ Y +A
Sbjct: 299 VMPNTVTFTILVDGLCKEGMVSEARLVFETM-TEKGVEPDISTYNALMDGYCLQRLMNEA 357
Query: 527 EKIYDLMCLK 536
+K++++M K
Sbjct: 358 KKVFEIMIRK 367
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/384 (19%), Positives = 168/384 (43%), Gaps = 24/384 (6%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+Q+ + + + + D + K+R + +++ +G P+ T++ ++ + +
Sbjct: 224 MEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNL-- 281
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSL-FRALVSKPGGLSKY-YLQQAEFIFHNLLT 288
G L+EA ++ M+ R + N++ F LV GL K + +A +F +
Sbjct: 282 -GQLNEATRLFKEMVG------RDVMPNTVTFTILVD---GLCKEGMVSEARLVFETMTE 331
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
G+E Y+ L+ + Q +++ + + M + G G ++ K +
Sbjct: 332 KGVEPDISTYNALMDGYCLQRLMNEAKKVF--EIMIRKGCAPGAHSYNILINGYCKSRRM 389
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
++A+ + T + M+ ++G ++L +F+EM ++ Y +
Sbjct: 390 DEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVIL 449
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECL- 464
++ CK + L+K E K L P+ ++ T + + + +L +A FS+
Sbjct: 450 LDGFCKHGHLDEALKLLKSMKE---KKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFG 506
Query: 465 EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFV 524
+ RP+ Y + ++ L G ++A ++F M D + N+ S N+++ +L + D
Sbjct: 507 DGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP-NSCSYNVMIQGFLQNQDSS 565
Query: 525 KAEKIYDLMCLKKYEIESAWMEKL 548
A ++ D M K++ + + + L
Sbjct: 566 TAIRLIDEMVGKRFSVNLSTFQML 589
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 107/229 (46%), Gaps = 16/229 (6%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D + +G PS +TF++L+ Y A G + A +N+M + G+QP +N L
Sbjct: 165 LLDMMRTEGTRPSIITFNLLVDGYGKA---GKMSNALPFFNQM-KAAGFQPSAVTYNMLI 220
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
G + +A ++ GLE K Y+ LI + ++++ K +L
Sbjct: 221 ------AGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKA-FEILAG 273
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME--AYAK 379
M++AG E ++R EG+++DA K + + E G+ +Y M Y +
Sbjct: 274 -MEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGE--KGVEPSNVIYDMMIYGYGR 330
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
G K+L++ EM+++ + +Y I +LCK ++ + E+L+ +
Sbjct: 331 EGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDM 379
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 122/325 (37%), Gaps = 56/325 (17%)
Query: 178 FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEA 237
D T L + K A+ R +FD++ G P+E+T+ L+ Y + G ++
Sbjct: 36 LDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFT---HGQREKG 92
Query: 238 CSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI 297
+++ M + GG +P +N L + + EF
Sbjct: 93 FALFEEM-RRGGVEPNLYTYNCLI-----------GEWCRTGEF---------------- 124
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
ER L EM G +++ + G + DA K L
Sbjct: 125 ----------------ERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAK-LLD 167
Query: 358 LLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
++ ++ P+ F ++ Y K G+ +L F +M+ S Y+ +I C+A
Sbjct: 168 MMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRAR 227
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS--ECLEKC--RPNRT 472
+ + + E G++P +Y L + + + + AF +EK +
Sbjct: 228 DMTRANRALSDMKERGLEPTKVTYTILIDSFAR---ENHMGKAFEILAGMEKAGLEVDAH 284
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHM 497
YG+ + +L GN++ A ++F M
Sbjct: 285 TYGVLVRALCMEGNMKDARKLFQSM 309
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 128/328 (39%), Gaps = 32/328 (9%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
PS TF I+ Y SA G D+A ++ M + G +Q S N++ L
Sbjct: 124 PSPKTFAIVAERYASA---GKPDKAVKLFLNMHEHGCFQDLASF-NTILDVLCKSKRVEK 179
Query: 273 KYYLQQA-------EFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
Y L +A + + +N++ +G + K L L KEM +
Sbjct: 180 AYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVL----------------KEMVE 223
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMK 385
G ++L+ + G + A + +L + + D I + + + GE +
Sbjct: 224 RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKR 283
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+ +F EM SV Y+ +I++LCK + E + +E V G +P + +Y L
Sbjct: 284 ARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIR 343
Query: 446 MYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
+ G R E C PN Y + + +EKA +F M S +
Sbjct: 344 GLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLP 403
Query: 505 VNTRSCNIILSAYL---SSGDFVKAEKI 529
N + NI++S S D V A K+
Sbjct: 404 -NLDTYNILISGMFVRKRSEDMVVAGKL 430
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 108/243 (44%), Gaps = 4/243 (1%)
Query: 319 LKKEMQQAG-FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
L +EM + G F E+ L + +C + VE A+K L I F + +
Sbjct: 538 LTREMVEKGFFPTPVEINLLIQSLCQNQKVVE-AKKYLEECLNKGCAINVVNFTTVIHGF 596
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
+IG+ +L + +M Y + + L K + L+ + + G+ P
Sbjct: 597 CQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTP 656
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+Y ++ + Y G D + L E + K +P RT+Y +E L + GN+E+AE++ +
Sbjct: 657 VTYRSVIHRYSQWGRVDDM-LNLLEKMLKRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKV 715
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRK 557
+ V+ +C++++ +YL G + A K+ M + + EK+ L L+ K
Sbjct: 716 LRTAS-KVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGK 774
Query: 558 EVK 560
V+
Sbjct: 775 LVE 777
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 127/294 (43%), Gaps = 41/294 (13%)
Query: 172 QQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI--------V 223
++HW+ + + + +E K ++ D+ +++ +G P+ + ++LI V
Sbjct: 508 EEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKV 567
Query: 224 AYLSAPVQGCLDEACSI----YNRMIQ-------------------LGGYQPRPSLHNSL 260
++ CL++ C+I + +I L G P + +L
Sbjct: 568 VEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTAL 627
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
F AL K G L + AE I +L+ GL+ Y +I +S +D + ++LL+
Sbjct: 628 FDAL-GKKGRLD----EAAELIV-KMLSKGLDPTPVTYRSVIHRYSQWGRVD-DMLNLLE 680
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
K +++ F + V V+ G++E+AEK ++L + + + ME+Y K
Sbjct: 681 KMLKRQPF---RTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKK 737
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
G + + ++ M R + + K+ + L + ++LM FVE G++
Sbjct: 738 GVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADNLMLRFVERGIQ 791
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 5/167 (2%)
Query: 334 VLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP--AFVYKMEAYAKIGEFMKSLEIFR 391
V ++L V +K + A + LRL+ + GI P AF Y M +Y++ G+ +L +
Sbjct: 202 VYYTMLDVLSKTKLCQGARRV-LRLM-TRRGIECPPEAFGYVMVSYSRAGKLRNALRVLT 259
Query: 392 EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
MQ+ S+ + I +L K + E ++ TG+KP + +Y +L Y +L
Sbjct: 260 LMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLN 319
Query: 452 -MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ D L L + C P++ Y + L IE+ + + M
Sbjct: 320 RIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKM 366
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 41/257 (15%)
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
A F + S ++ IY+ LI H+Y + D E +EM G + + V S+
Sbjct: 150 ARATFEAMRASHIKPNVHIYTSLI--HAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSI 207
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
+ A G+ E AE W +++N +P
Sbjct: 208 ISGYASAGNNEAAEH-WFEKFKAENLVPGGIV---------------------------- 238
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
Y+ I++ C+A E E+L+ + E G + + Y + N + + ++ L
Sbjct: 239 ------YNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKC-L 291
Query: 459 AFSECLEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
+F L+ C P YG ++ AGN+ KA +I M + N +I+
Sbjct: 292 SFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM-DKHGVSPNKMIYAMIMDG 350
Query: 517 YLSSGDFVKAEKIYDLM 533
Y GDF A K+++ M
Sbjct: 351 YARGGDFTAAFKVWEDM 367
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 111/283 (39%), Gaps = 39/283 (13%)
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
FH L GL Y ++ L + N+ K + +L+ EM + G K + ++
Sbjct: 294 FHRLKACGLSPTAATYGCIVKLFTKAGNMAKA-LDILE-EMDKHGVSPNKMIYAMIMDGY 351
Query: 343 AKEGDVEDAEKTW----------------------------------LRLLESDNGIPT- 367
A+ GD A K W L ++++ +PT
Sbjct: 352 ARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTI 411
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
+ ++ Y K G K+LE+F ++ V +Y+ ++ L KA + E ++ E
Sbjct: 412 ETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDE 471
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGN 486
+ G+ P SY LT Y G ++ F E + YG L++ +G
Sbjct: 472 MLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGA 531
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
+++A E+F + +D + N + +L + G+ KA +
Sbjct: 532 MQRAVEVFQQI-TDAGLKHNRITYCTMLDGWARKGELSKARDL 573
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 24/177 (13%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM----- 244
+ K R+ R + D+++ G VP+E ++ L Y A G +++A ++ RM
Sbjct: 456 LAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARA---GDVEKAFGMFQRMKKENL 512
Query: 245 -IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
I + Y +L +A K G + Q+A +F + +GL+ + Y ++
Sbjct: 513 AIDIVAY-------GALLKA-CCKSGAM-----QRAVEVFQQITDAGLKHNRITYCTMLD 559
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
+ + + K R L K+MQ+ GF S ++ C + GD E+ +T + E
Sbjct: 560 GWARKGELSKARD--LLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMRE 614
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 114/266 (42%), Gaps = 18/266 (6%)
Query: 162 TGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHIL 221
F+V+E M+ + D L K + K + ++I +P+ T+ +
Sbjct: 359 AAFKVWEDMVSA-GLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSI 417
Query: 222 IVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF 281
+ Y+ G + +A +++R I+ G +P +NSL L ++ A
Sbjct: 418 LDGYVKG---GHIQKALEVFDR-IKTAGLRPGVVSYNSLLSGLAKAR------QMENARL 467
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+ +L +G+ + Y+ L Y D E+ + + M++ ++L+
Sbjct: 468 MLDEMLANGVVPNERSYTALT--EGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKA 525
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVY--KMEAYAKIGEFMKSLEIFREMQERLGS 399
C K G ++ A + + ++ +D G+ Y ++ +A+ GE K+ ++ ++MQ+
Sbjct: 526 CCKSGAMQRAVEVFQQI--TDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFH 583
Query: 400 ASVPAYHKIIELLCKAEET-ELTESL 424
Y I+ ++ +T E+TE+L
Sbjct: 584 LDTICYTSFIKACFRSGDTEEVTETL 609
>gi|224112076|ref|XP_002316075.1| predicted protein [Populus trichocarpa]
gi|222865115|gb|EEF02246.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 157/373 (42%), Gaps = 19/373 (5%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
+V+E + +Q +Y+ A KL +G+ + + +FD+++ +G P+ + L+
Sbjct: 70 AIQVFEMLKEQPFYQPKEATYMKLLVLLGRCGQPQRAHQLFDEMVEEGIEPTTELYTALL 129
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV--SKPGGLSKYYLQQAE 280
AY +DE SI N+M L QP +++L +A V S+ + Y + E
Sbjct: 130 AAYCR---NNLIDEGFSIINQMKSLPRCQPDVYTYSTLLKACVDASRFELIDTLYQEMDE 186
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
L++ Q + SG + Y D +++ +L + ++ A + + +L
Sbjct: 187 ----RLISPNTVTQNVVLSGYGRVGMY-DQMER----VLSEMLESAACKPDVWTMNIILS 237
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
V EG ++ E+ + + T F + AY K + K + M++
Sbjct: 238 VFGNEGQIDLMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKVQFPW 297
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
+ Y+ +IE + + E + MK ++ L N Y N G+ ++ +
Sbjct: 298 TTSTYNNVIEAFADVGDAKNMEYAFDQMRAESMKADTKTFCCLINGYANAGLFHKVISSV 357
Query: 461 SECLEKCRP-NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
+ P N + + + + A ++ + E +F M D+ ++R+ +I++ AY
Sbjct: 358 QLAAKFEIPENTSFFNAVISACAKADDLMEMERVFKRMK-DKQCPPDSRTYSIMVEAYRK 416
Query: 520 SGDFVKAEKIYDL 532
G +KIY L
Sbjct: 417 EG---MNDKIYYL 426
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 382 EFMKSLEIFREMQER-LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
++++++++F ++E+ Y K++ LL + + + L E VE G++P Y
Sbjct: 66 QWLQAIQVFEMLKEQPFYQPKEATYMKLLVLLGRCGQPQRAHQLFDEMVEEGIEPTTELY 125
Query: 441 INLTNMYLNLGMHDRLHLAFSE--CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
L Y + D ++ L +C+P+ Y L++ +A E + ++ M
Sbjct: 126 TALLAAYCRNNLIDEGFSIINQMKSLPRCQPDVYTYSTLLKACVDASRFELIDTLYQEM- 184
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++ I NT + N++LS Y G + + E++ M
Sbjct: 185 DERLISPNTVTQNVVLSGYGRVGMYDQMERVLSEM 219
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 133/299 (44%), Gaps = 17/299 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F+++++QG P+ +TF +LI +G + +A + MIQ+G P + SL
Sbjct: 259 LFNEMVDQGVQPNVVTFSVLIDMLCK---EGQVIKAKKLLEMMIQIG-IVPNLFTYTSLI 314
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
+ L A+ +F ++ + G E D+ S + ++ Y + E L
Sbjct: 315 KGFCLVGD------LNSAKELFVSMPSKGYE--PDVISYNMLINGYCKTLKVEEAMKLFN 366
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAK 379
EM G + +L+ G V+DA K R+++ +P + ++ K
Sbjct: 367 EMLHVGMWPDVKTSGVLLKALFLAGKVDDA-KELFRVIKP-YAMPKDLCICCIFLDGLCK 424
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
G +++++F E++ + + +I+ LCKA + E L ++ E G++P +
Sbjct: 425 NGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMA 484
Query: 440 YINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
Y ++ + + G D+ ++ F + E C P+ Y I + + +EK ++ + M
Sbjct: 485 YSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRM 543
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 130/312 (41%), Gaps = 14/312 (4%)
Query: 206 IINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV 265
I+ +G +P +TF LI V+ + EA ++ RM +LG P + +L + L
Sbjct: 152 IMRRGYIPDVVTFTTLIKGLC---VEHRIIEATKLFMRMQKLGC-TPNVVTYGTLIKGLC 207
Query: 266 SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
+ G L+ + + ++ + ++ S I + + E L EM
Sbjct: 208 AL--GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVD 265
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEF 383
G + ++ + KEG V A+K +++ GI F Y ++ + +G+
Sbjct: 266 QGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQI--GIVPNLFTYTSLIKGFCLVGDL 323
Query: 384 MKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP-LMPSYIN 442
+ E+F M + V +Y+ +I CK + E L E + GM P + S +
Sbjct: 324 NSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVL 383
Query: 443 LTNMYLNLGMHDRLHLAFSECLEKCRP-NRTIYGIYLESLKNAGNIEKAEEIFNHMHS-D 500
L ++L + D L F P + I I+L+ L G I +A ++FN + S +
Sbjct: 384 LKALFLAGKVDDAKEL-FRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYN 442
Query: 501 QTIGVNTRSCNI 512
+ + T C I
Sbjct: 443 MKLDIETFGCLI 454
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 8/139 (5%)
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY-------INLTNMYLNLGMHD 454
V + +I+ LC L + G P + +Y L N+ + L H
Sbjct: 161 VVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQ 220
Query: 455 RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
+ S + CRPN Y I ++ L GN E+A +FN M DQ + N + ++++
Sbjct: 221 EMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEM-VDQGVQPNVVTFSVLI 279
Query: 515 SAYLSSGDFVKAEKIYDLM 533
G +KA+K+ ++M
Sbjct: 280 DMLCKEGQVIKAKKLLEMM 298
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/163 (18%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
++ K+G + +++ +F EM ++ +V + +I++LCK + + L++ ++ G+
Sbjct: 244 IDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGI 303
Query: 434 KPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
P + +Y +L + +G ++ L S + P+ Y + + +E+A +
Sbjct: 304 VPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMK 363
Query: 493 IFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+FN M +G+ + ++ ++L A +G A++++ ++
Sbjct: 364 LFNEMLH---VGMWPDVKTSGVLLKALFLAGKVDDAKELFRVI 403
>gi|147820978|emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
Length = 525
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 159/373 (42%), Gaps = 19/373 (5%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
V+E + +Q +Y+ KL +GK + + ++FD ++ +G P+ + L+
Sbjct: 127 ALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTELYTALL 186
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
+Y + + +DEA SI N+M L QP +++L +A V S++ L ++ +
Sbjct: 187 ASYCRSNL---IDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDA----SRFELVESLYE 239
Query: 283 FHNL--LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
++ +T Q + SG + D ++K +L ++ + + ++L
Sbjct: 240 EMDVRSITPNTVTQNIVLSGYGKAGKF-DEMEK----VLSGMLESTSSKPDVWTMNTILS 294
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
+ +G +E EK + + T F + AY K + K + M++
Sbjct: 295 LFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
+ Y+ +IE + + E + GMK ++ L Y N G+ ++ +
Sbjct: 355 TTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSV 414
Query: 461 SECLEKCRP-NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
+ P N + Y + + A ++ + E +FN M D+ ++ + +I++ AY
Sbjct: 415 QLAGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRMK-DKHCQPDSTTYSIMVEAYKK 473
Query: 520 SGDFVKAEKIYDL 532
G +KIYDL
Sbjct: 474 EG---MNDKIYDL 483
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 151/370 (40%), Gaps = 20/370 (5%)
Query: 133 RILNAQKKW-LRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADY 189
R L+ KW LR TY L +R RE GF VYE M++ Y+ D L +
Sbjct: 169 RCLDLASKWGLRLNGYTYKCLVQAHLRSREVWKGFEVYE-KMRRKGYKLDIFAYNMLLNA 227
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
+ K + +F+D+ P T+ ILI A G + S+ M+ G
Sbjct: 228 LAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKA---GKTTKFVSLLEEMVSEGC 284
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
+ +N++ AL G +K + +A F+ ++ S + YS ++ + S
Sbjct: 285 VLNLIA-YNTVIEAL-----GKNKM-VDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGG 337
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
+ + L + + + V +++ K G +A + R+ S A
Sbjct: 338 QLHR-----LNEILDICSGCLNRPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYA 392
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
FV +EA + +++++ M E+ + V Y+ I L K ++ SL
Sbjct: 393 FVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMR 452
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIE 488
G+ P + +Y + + + +G+ D+ F E + C+P+ Y + L G+++
Sbjct: 453 ANGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLD 512
Query: 489 KAEEIFNHMH 498
+A +F M
Sbjct: 513 EAHMLFKDMQ 522
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 363 NGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
NG+ F Y + ++ ++G K+ E+F EM++ V Y+ +I L K + +
Sbjct: 454 NGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDE 513
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECLEK-CRPNRTIYGI 476
L K+ E G P + +Y L + G +++ +A F E + + C PN Y I
Sbjct: 514 AHMLFKDMQEKGYDPDVFTYSILIECF---GKSNKVDMACSLFDEMVAQGCIPNIVTYNI 570
Query: 477 YLESLKNAGNIEKAEEIF 494
L+ L+ G +A + +
Sbjct: 571 LLDCLERRGKTTEAHKFY 588
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/437 (19%), Positives = 177/437 (40%), Gaps = 52/437 (11%)
Query: 132 VRILNAQKKWLRQEDGTYL--------AVHCMRIREN-ETGFRVYEWMMQQHWYRFDFAL 182
+ I+ + W R + ++L V+ + N E+ R + W+ + H+++ D +
Sbjct: 54 ISIILSSPTWERSSELSHLIPKLKPHHVVNLLDTHNNTESVLRFFHWVSRTHFFKHDMSC 113
Query: 183 ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYN 242
+ + + ++R F ++ +I R E+ I +++ ++ D ++Y+
Sbjct: 114 FVSMLNRLVRDRLFVPADNVRILMIKSCRNEGEVKRVIQVLSEINTT----YDFGYTLYS 169
Query: 243 ---RMIQLG------------------GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF 281
+IQLG G +P N++ + L +K +Q+AE
Sbjct: 170 FSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGK------VQEAEL 223
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
I ++ G Y+ LI H N+D + + M + G + +++
Sbjct: 224 IMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLA-FEMFDR-MVKDGCDPNSVTYSALING 281
Query: 342 CAKEGDVEDAEKTWLRLLES--DNGI-PTP-AFVYKMEAYAKIGEFMKSLEIFREMQERL 397
EG +E+A + +LE D GI PT A+ + + G +++++ +M++R
Sbjct: 282 LCSEGRLEEA----MDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRG 337
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
+V Y +I L + + E+ + + + G+ P +Y L N G +
Sbjct: 338 CGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETAL 397
Query: 458 LAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F L PN Y + ++ + G I+KA IF+ M N + NII+
Sbjct: 398 TIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGP-SPNVITYNIIIHI 456
Query: 517 YLSSGDFVKAEKIYDLM 533
Y G A ++ ++M
Sbjct: 457 YFKQGYMNNAMRLLEMM 473
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 147/346 (42%), Gaps = 34/346 (9%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKE----RKFAKCRDIFDDIINQGRVPSEM 216
ET ++EWM+ D T+ + + K K IFD ++ G P+ +
Sbjct: 394 ETALTIFEWMLSH-----DSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVI 448
Query: 217 TFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-Y 275
T++I+I Y QG ++ A + M++ G + L + L+S G S+
Sbjct: 449 TYNIIIHIYFK---QGYMNNAMRLL-EMMKGNGLK----LDTWTYANLIS---GFSRGGK 497
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
L+ A +F+ ++ G+ Y+ +I + +D + ++L K M ++G
Sbjct: 498 LEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVD-DALALFWK-MVESGNVPSSGTY 555
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESD---NGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
++ +K + +AE ++++ N I +F+ + K G + +IF E
Sbjct: 556 NMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFI---DGLCKNGRTSLAFKIFHE 612
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG- 451
M++R ++ Y +I+ LC+ + E E L+ + G +P + +Y L G
Sbjct: 613 MKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGR 668
Query: 452 MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
++ L S + +P+ IY L +E A +IF+ M
Sbjct: 669 CYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSM 714
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 93/461 (20%), Positives = 184/461 (39%), Gaps = 82/461 (17%)
Query: 148 TYLAVHCMRIREN--ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDD 205
TY A+ I+E E R+ + M+ + + + + + K + AK +F++
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGL-KLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406
Query: 206 IINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV 265
++ G P T+++LI YL + +AC + M + P P ++ L L
Sbjct: 407 MLMAGIEPDTWTYNLLIDGYLKSHDMA---KACELLAEM-KARKLTPSPFTYSVLISGLC 462
Query: 266 S-------------------KP-----GGLSKYYLQQAEF-----IFHNLLTSGLEIQKD 296
KP G L K Y+Q++ + + ++ +G+
Sbjct: 463 HSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLF 522
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
Y+ LI +++ ++ L+ +M + G + + + + +K G+++ AE+ +
Sbjct: 523 CYNCLIIGLCRAKKVEEAKMLLV--DMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFK 580
Query: 357 RLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQER------------------ 396
+L S GI +Y ++ + +G +++L F+ M E+
Sbjct: 581 DMLSS--GIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSK 638
Query: 397 --------------LGSASVP---AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
L + VP Y+ +I CK + E L E + G+ P +
Sbjct: 639 NGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVV 698
Query: 440 YINLTN--MYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
Y L N Y G F E + K P+ IY I ++ GN+EKA +F H
Sbjct: 699 YNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF-H 757
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
+++G + + N ++ ++ G ++A +++D M KK
Sbjct: 758 EAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKK 797
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 146/353 (41%), Gaps = 53/353 (15%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L D K+++ + + IF+ + + G P+ T+ LI ++ +G ++EA I +
Sbjct: 315 TLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIK---EGNIEEALRIKDE 371
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
MI G L+ + A++ GG++K + +A +F+ +L +G+E D ++ +
Sbjct: 372 MITRG-----LKLNVVTYNAMI---GGIAKAGEMAKAMSLFNEMLMAGIE--PDTWTYNL 421
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+ Y + D + L EM+ ++ D++ A + +++
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIR-- 479
Query: 363 NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
NG+ F+Y ++AY + + ++E+ + M + Y+ +I LC+A++ E
Sbjct: 480 NGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEE 539
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLES 480
+ L+ + E G+KP N YG ++
Sbjct: 540 AKMLLVDMGEKGIKP----------------------------------NAHTYGAFINL 565
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+G I+ AE F M S + N I++ + G+ V+A + M
Sbjct: 566 YSKSGEIQVAERYFKDMLSSGIVP-NNVIYTILIKGHCDVGNTVEALSTFKCM 617
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 134/314 (42%), Gaps = 16/314 (5%)
Query: 224 AYLSAPVQ-GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
A++ Q G +DEA + M++ G P H + LV G + ++A+ I
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKG---LGPDGHT--YTLLVD--GFCKQKRSKEAKLI 333
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
F ++ +SGL + Y+ LI + NI E +K EM G + +++
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNI--EEALRIKDEMITRGLKLNVVTYNAMIGGI 391
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSA 400
AK G++ A + +L + GI + Y + + Y K + K+ E+ EM+ R +
Sbjct: 392 AKAGEMAKAMSLFNEMLMA--GIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTP 449
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD-RLHLA 459
S Y +I LC + + + ++ + + G+KP + Y L Y+ ++ + L
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509
Query: 460 FSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
P+ Y + L A +E+A+ + M ++ I N + ++ Y
Sbjct: 510 KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM-GEKGIKPNAHTYGAFINLYSK 568
Query: 520 SGDFVKAEKIYDLM 533
SG+ AE+ + M
Sbjct: 569 SGEIQVAERYFKDM 582
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 116/281 (41%), Gaps = 47/281 (16%)
Query: 203 FDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG-------------- 248
F D+++ G VP+ + + ILI + G EA S + M++ G
Sbjct: 579 FKDMLSSGIVPNNVIYTILIKGHCDV---GNTVEALSTFKCMLEKGLIPDIRAYSAIIHS 635
Query: 249 --------------------GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
G P L+NSL K G + K A ++ +L
Sbjct: 636 LSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFC-KEGDIEK-----ASQLYDEMLH 689
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
+G+ +Y+ LI + Y + + L EM G + ++ C KEG++
Sbjct: 690 NGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNL 749
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
E A + + G AF ++++ K G+ +++ E+F +M ++ + ++ Y +
Sbjct: 750 EKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTIL 808
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
I+ KAE E E L F++ + ++P+ + T++ L+
Sbjct: 809 IDAYGKAEMMEEAEQL---FLDMETRNIIPNTLTYTSLLLS 846
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 156/385 (40%), Gaps = 19/385 (4%)
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
+AE ++ +GL + Y+ LI + N+D L M G + +
Sbjct: 222 EAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFL--SMPNKGCLRNEVSYTN 279
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQER 396
++ + V++A K + ++ E DN PT + + A ++G ++L +F+EM E+
Sbjct: 280 LIHGFCEARRVDEALKLFSQMHE-DNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEK 338
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
+V Y +I LC+ + + ++ +E G+ P + +Y L + Y G+
Sbjct: 339 HCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSAS- 397
Query: 457 HLAFSECLE--KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
L +E C PN Y + NI KA + + M ++ + N + NI++
Sbjct: 398 ALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKM-LERKLQPNVVTYNILI 456
Query: 515 SAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQR-- 572
GD A K+ LM + + W + R V++ SL S +++
Sbjct: 457 HGQCKEGDLGSAYKLLSLM-NESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGI 515
Query: 573 ---ENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEWLHPSFKFW 629
E + L+ G C R ++ + +S+ L D Y + K +
Sbjct: 516 KANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKE-----KNF 570
Query: 630 PKGRLVIPKLIHRWLTPRALAYWFM 654
+ RL++ +I R + P A Y +
Sbjct: 571 KEARLLVDIMIKRDIEPAADTYTIL 595
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 129/340 (37%), Gaps = 33/340 (9%)
Query: 160 NETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFH 219
NE+G EW + D + K + R +F+ + +G +E+ +
Sbjct: 476 NESGLVPDEWTY------------SVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYS 523
Query: 220 ILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQA 279
LI Y G + + + ++M+ G P +NSL G + ++A
Sbjct: 524 TLIDGYCKV---GKVSDGRFLLDKMLS-AGCVPNSITYNSLI------DGYCKEKNFKEA 573
Query: 280 EFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVL 339
+ ++ +E D Y+ LI D D+ + +M G + + +
Sbjct: 574 RLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHD--MFDQMLSTGSHPDVFIYTAFI 631
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERL 397
G ++DAE ++ + GI +Y + +AY + G + I + M E
Sbjct: 632 HAYCSHGRLKDAEVLICKM--NAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVG 689
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
S Y +I+ L A+ E++ S + +G+ + + +N + + L
Sbjct: 690 CEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGV-----ASNDFSNCWRRVDYEFTLD 744
Query: 458 LAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
L C PN YG ++ L G +E A +F+HM
Sbjct: 745 LFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHM 784
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 76/192 (39%), Gaps = 2/192 (1%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
K G+V +AE +++++ + T + + Y + + IF M + +
Sbjct: 215 CKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNE 274
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
+Y +I C+A + L + E P + +Y + LG F E
Sbjct: 275 VSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKE 334
Query: 463 CLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
EK C+PN Y + + SL N + A++I N M I + + N ++ Y G
Sbjct: 335 MTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIP-SVVTYNALIDGYCKKG 393
Query: 522 DFVKAEKIYDLM 533
A +I LM
Sbjct: 394 LSASALEILSLM 405
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 139/331 (41%), Gaps = 40/331 (12%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
++IF+++ QG +P+ +++ L+ + A G L+E+ ++N M+ G QP N
Sbjct: 82 KEIFEEMKAQGMIPNVISYSSLVHGFCCA---GKLEESKRLFNEMVD-QGVQPNLVQFNV 137
Query: 260 LFRAL-----VSKPGGLSKYYLQQA---EFIFHNLLTSGLEIQKDIYSG----------- 300
L L V + L + +Q+ + + +N L G D+ S
Sbjct: 138 LIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKG 197
Query: 301 --------LIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
I ++ Y E L EM Q G + ++L + G V DA
Sbjct: 198 CEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDAN 257
Query: 353 KTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
K + + S + + +V ++ K G +++E+F E++ +Y ++I+ L
Sbjct: 258 KLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGL 317
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-----C 467
CKA + E+ K+ + G++P + + + + + + D+ ++ F + +EK C
Sbjct: 318 CKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEK-MEKMEENGC 376
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
P+ Y L + K EE+ N +H
Sbjct: 377 TPDIITYNTLLRGFCES---NKLEEVVNLLH 404
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 120/312 (38%), Gaps = 40/312 (12%)
Query: 249 GYQPRPSLHNSLFRALVSK----------PGGLSKY-YLQQAEFIFHNLLTSGLEIQKDI 297
GY P +N+L + L GL K + +A+ IF + G+
Sbjct: 40 GYIPDIVTYNTLIKGLCRVHRISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVIS 99
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
YS L+ H + E L EM G + ++ + KEG V +A+K
Sbjct: 100 YSSLV--HGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKK---- 153
Query: 358 LLES--DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
LLE GI Y ++ + KIG+ + ++F M + + +Y +I C
Sbjct: 154 LLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYC 213
Query: 414 KAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRT 472
K + E +L E + G +P + +Y L L G + D L +
Sbjct: 214 KIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSC 273
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDL 532
IY I+L+ L G + +A E+FN + S Y DF ++ D
Sbjct: 274 IYVIFLDGLCKNGVLFEAMELFNELKS-----------------YNFKLDFESYSRLIDG 316
Query: 533 MCLKKYEIESAW 544
+C K ++E AW
Sbjct: 317 LC-KAGKVEIAW 327
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/435 (20%), Positives = 170/435 (39%), Gaps = 57/435 (13%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D KL + K+ + +FD ++ +G P+ TF+I I +G LD A
Sbjct: 294 DVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCK---EGSLDRAV 350
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
+ + G +P +N++ L K + +AE H ++ G E Y
Sbjct: 351 RLLG-CVSREGLRPDVVTYNTVICGLCRKS------RVVEAEECLHKMVNGGFEPNDFTY 403
Query: 299 SGLIWLHSYQDN-IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
+ +I + + +D RI K+ GF+ + S++ ++GD + A +
Sbjct: 404 NSIIDGYCKKGMVVDANRIL---KDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKD 460
Query: 358 LLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCK- 414
L G+ VY ++ + G + +L++ EM E+ + Y+ II LCK
Sbjct: 461 GL--GKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKM 518
Query: 415 --------------------------------AEETELTES--LMKEFVETGMKPLMPSY 440
+ +L + L+ GM P + +Y
Sbjct: 519 GCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITY 578
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
L N + + F EK C PN Y +ESL N+ + +A ++ M S
Sbjct: 579 NTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKS 638
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEV 559
+ + + S +++ + GD A ++ M K+Y++ S + ++S +++
Sbjct: 639 -KGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGM-EKQYDV-SHTTATYNIIISAFSEQL 695
Query: 560 KKPVSLNLSSEQREN 574
++L L SE ++N
Sbjct: 696 NMKMALRLFSEMKKN 710
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/197 (18%), Positives = 83/197 (42%), Gaps = 2/197 (1%)
Query: 334 VLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREM 393
V + +R ++G +++A T+ R+ + ++ M + G F ++ +++ M
Sbjct: 157 VYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRM 216
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
+++ + V Y I+ C+ L++ G +Y + + G +
Sbjct: 217 KDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDN 276
Query: 454 DRLHLAFSECLEKCR-PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI 512
DR F E LE C P+ T + + +L G + ++E +F+ + + + N + NI
Sbjct: 277 DRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLK-RGVCPNLFTFNI 335
Query: 513 ILSAYLSSGDFVKAEKI 529
+ G +A ++
Sbjct: 336 FIQGLCKEGSLDRAVRL 352
>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 879
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 10/241 (4%)
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ ++ G + Y+ LI HSY + N +E +++ +MQ+ G E + +++
Sbjct: 405 LLEQMVKDGCQPNVVTYNRLI--HSYGRANYLREALNVFN-QMQEMGCEPDRVTYCTLID 461
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLG 398
+ AK G ++ A + R+ E G+ F Y + K G + +F EM ++
Sbjct: 462 IHAKAGFLDVAMSMYERMQEV--GLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGC 519
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
++ Y+ +I L KA + L ++ G KP +Y + + + G +
Sbjct: 520 VPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEA 579
Query: 459 AFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
F E + P+ +YG+ ++ AGN+EKA E ++ M + N +CN +LSA+
Sbjct: 580 VFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLL-PNVPTCNSLLSAF 638
Query: 518 L 518
L
Sbjct: 639 L 639
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 125/317 (39%), Gaps = 41/317 (12%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+++++ + W+ +Q + D T + +G+ R+F + + ++ G P+
Sbjct: 359 QLQDHSVAVGFFCWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNV 418
Query: 216 MTFHILIVAYLSAPV-------------QGC-------------------LDEACSIYNR 243
+T++ LI +Y A GC LD A S+Y R
Sbjct: 419 VTYNRLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYER 478
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M ++G P ++ + L K G LS A +F ++ G Y+ LI
Sbjct: 479 MQEVG-LSPDTFTYSVMINCL-GKSGNLSA-----AHRLFCEMVDQGCVPNIVTYNILIA 531
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
L + N + L ++MQ AGF+ K V+ V G +E+AE + + ++
Sbjct: 532 LQAKARNY--QTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHW 589
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
P + ++ + K G K+ E + M +VP + ++ + +
Sbjct: 590 VPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYN 649
Query: 424 LMKEFVETGMKPLMPSY 440
L++ V G+ P + +Y
Sbjct: 650 LLQNMVTLGLNPSLQTY 666
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 93/233 (39%), Gaps = 26/233 (11%)
Query: 291 LEIQKDIYSGLIW-------LHSYQDNIDKERISLLKKEMQ--------------QAGFE 329
+E+ KDI L W L++ +ID + + + K++Q Q GF
Sbjct: 321 VEVVKDILKQLRWGPATEKTLYNLNFSIDAYQANQILKQLQDHSVAVGFFCWLKRQPGFW 380
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSL 387
+++ + + + K ++++ +G Y + +Y + ++L
Sbjct: 381 HDGHTYTTMVGILGRAREFGAINKLLEQMVK--DGCQPNVVTYNRLIHSYGRANYLREAL 438
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
+F +MQE Y +I++ KA ++ S+ + E G+ P +Y + N
Sbjct: 439 NVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCL 498
Query: 448 LNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
G H F E +++ C PN Y I + A N + A E++ M +
Sbjct: 499 GKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQN 551
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 16/245 (6%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
++ +++ +G P T++ILI + +G + +A I+ M + G + + +L
Sbjct: 273 ELVEEMGGKGLAPDVFTYNILINGHCK---EGNVKKALEIFENMSRRG-VRATVVTYTAL 328
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
AL SK G +Q+ + +F + G+ +Y+ LI HS NID R +
Sbjct: 329 IYAL-SKKG-----QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID--RAFEIM 380
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
EM++ +++R G V++A K + E GI Y + Y+
Sbjct: 381 GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE--RGIQPDLVTYNTLISGYS 438
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
G+ +L I EM + + ++ Y+ +I+ LCK + + E+++KE VE G+ P
Sbjct: 439 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 498
Query: 439 SYINL 443
+YI+L
Sbjct: 499 TYISL 503
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 147/361 (40%), Gaps = 58/361 (16%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRV-PSEMTFHILIVAYLSAPVQGCLDEACSIYN 242
T +A + + R A DI ++ +G + P++ T+ +I + G +DEA +++
Sbjct: 150 TVIAGFCSRGRVQAAL-DIMREMRERGGIAPNQYTYGTVISGWCKV---GRVDEAVKVFD 205
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
M+ G +P ++N+L G + L A ++ G+ + Y+ L+
Sbjct: 206 EMLTKGEVKPEAVMYNALIG------GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 259
Query: 303 WLHS-YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
H+ + D E L+ +EM GK
Sbjct: 260 --HALFMDGRGTEAYELV-EEMG------GK----------------------------- 281
Query: 362 DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
G+ F Y + + K G K+LEIF M R A+V Y +I L K + +
Sbjct: 282 --GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 339
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGIY 477
T+ L E V G++P + Y L N + G DR E +EK R P+ Y
Sbjct: 340 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE-MEKKRIAPDDVTYNTL 398
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
+ L G +++A ++ + M +++ I + + N ++S Y GD A +I + M K
Sbjct: 399 MRGLCLLGRVDEARKLIDEM-TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 457
Query: 538 Y 538
+
Sbjct: 458 F 458
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 126/300 (42%), Gaps = 18/300 (6%)
Query: 202 IFDDIINQGRV-PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
+FD+++ +G V P + ++ LI Y QG LD A +RM++ G + +N L
Sbjct: 203 VFDEMLTKGEVKPEAVMYNALIGGYCD---QGKLDTALLYRDRMVERG-VAMTVATYNLL 258
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
AL G Y L + GL Y+ LI H + N+ K+ + + +
Sbjct: 259 VHALFMDGRGTEAYEL------VEEMGGKGLAPDVFTYNILINGHCKEGNV-KKALEIFE 311
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
M + G +++ +K+G V++ +K + + GI +Y + +++
Sbjct: 312 N-MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR--RGIRPDLVLYNALINSHS 368
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
G ++ EI EM+++ + Y+ ++ LC + L+ E E G++P +
Sbjct: 369 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLV 428
Query: 439 SYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+Y L + Y G + D L + + P Y ++ L G + AE + M
Sbjct: 429 TYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 488
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 143/371 (38%), Gaps = 50/371 (13%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ + R D T+L +GK + + F ++ +G P + F ++ +L
Sbjct: 1281 MRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRP-DTVFMNNMINFLGK-- 1337
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G LD+A ++ M L P +N++ +AL SK + F + SG
Sbjct: 1338 AGRLDDAMKLFQEMETLRCI-PSVVTYNTIIKALFE-----SKSRASEVPSWFERMKESG 1391
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ YS I + + E+ +L +EM + GF
Sbjct: 1392 ISPSSFTYS--ILIDGFCKTNRMEKAMMLLEEMDEKGFP--------------------- 1428
Query: 351 AEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
P P A+ ++A K + + E+F+E++E GS+S Y +I
Sbjct: 1429 ---------------PCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMI 1473
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CR 468
+ L KA + ++ E + G P + +Y L + GM D E C
Sbjct: 1474 KHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCI 1533
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
P+ Y I L L G +A E+ ++M T+ + S N +L A +G F +A K
Sbjct: 1534 PDINSYNIILNGLAKTGGPHRAMEMLSNMK-QSTVRPDVVSYNTVLGALSHAGMFEEASK 1592
Query: 529 IYDLMCLKKYE 539
+ M +E
Sbjct: 1593 LMKEMNTLGFE 1603
Score = 39.3 bits (90), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 2/148 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ A+ K+G ++++ EM+E + Y +I L K + SL +E
Sbjct: 1227 ISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYC 1286
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
+P + +Y L G D + F E E CRP+ + L AG ++ A +
Sbjct: 1287 RPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMK 1346
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSS 520
+F M + + I + + N I+ A S
Sbjct: 1347 LFQEMETLRCI-PSVVTYNTIIKALFES 1373
>gi|449507993|ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37230-like [Cucumis sativus]
Length = 760
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 88/438 (20%), Positives = 187/438 (42%), Gaps = 29/438 (6%)
Query: 119 LCKELPSHKGGTLVRILNAQKKWLRQEDG--TYLAVHCMRIRENETGFRVYEWMMQQHWY 176
+CK + + + T R+ N+ + + Q D Y +H + E+ F + W+ + +
Sbjct: 95 ICKMMANREWTT--RLQNSIRSLVPQFDHNLVYNVLHAAKKSEHALNF--FRWVERAGLF 150
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
+ D K+ + +G+ K R I D+ N+G E F +LI +Y A G + E
Sbjct: 151 QHDRETHFKIIEILGRASKLNHARCILLDMPNKGVQWDEDLFVVLIESYGKA---GIVQE 207
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
A I+ +M +LG + S +++LF+ ++ + +Y + A+ F+ +L G+E +
Sbjct: 208 AVKIFQKMKELGVERSVKS-YDALFKEIMRR----GRYMM--AKRYFNAMLNEGIEPIRH 260
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
Y+ ++W + ++ E ++M+ G +++ + +E+AE+ +
Sbjct: 261 TYNVMLW--GFFLSLRLETAKRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFT 318
Query: 357 RLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
++ N PT ++ ++ Y + +L +F EM+ + Y ++ LC A
Sbjct: 319 E-MKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDA 377
Query: 416 EETELTESLMKEFVETGMKPLMPS-YINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI- 473
E+ ++ E V P S ++ L + G D + P
Sbjct: 378 EKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGH 437
Query: 474 YGIYLESLKNAGNIEKAEEIFNH-------MHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
YGI +E+ AG ++A ++ + + T+ + + N+I+ + G KA
Sbjct: 438 YGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKA 497
Query: 527 EKIYDLMCLKKYEIESAW 544
+ + + K + E A+
Sbjct: 498 DTFFRQLLKKGIQDEVAF 515
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 160/376 (42%), Gaps = 17/376 (4%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+I E + ++ M++ R + + + D + K++ + D++ ++ +G P+
Sbjct: 127 KIGETRSALKLLR-MIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNV 185
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+T+ LI + A G L EA + N MI L P + L AL K G +
Sbjct: 186 ITYSTLIYGFCLA---GQLMEAFGLLNEMI-LKNINPNVYTYTILMDAL-CKEGKV---- 236
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
++A+ + + G++ Y+ L+ + + + + +Q+
Sbjct: 237 -KEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAK-QMFHTMVQKGVNPNVYSYN 294
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
+ + R+C K V++A LR + N +P T + ++ + K+G +L++ +EM
Sbjct: 295 IMIDRLC-KSKRVDEA-MNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMY 352
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
R A V Y +++ LCK + + +L + E G++P +Y L + G H
Sbjct: 353 HRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHK 412
Query: 455 RLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
F L K CR N Y + + L G +++A + + M + I + + II
Sbjct: 413 NAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIP-DAVTFEII 471
Query: 514 LSAYLSSGDFVKAEKI 529
+ + KAEK+
Sbjct: 472 IRSLFEKDQNDKAEKL 487
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 130/308 (42%), Gaps = 21/308 (6%)
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYL---QQAEFIFHNLLTSGLEIQKDIYS 299
RMI+ +P ++N++ L Y L A IF N++T YS
Sbjct: 139 RMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT---------YS 189
Query: 300 GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
LI+ + E LL EM ++ KEG V++A K L ++
Sbjct: 190 TLIYGFCLAGQL-MEAFGLLN-EMILKNINPNVYTYTILMDALCKEGKVKEA-KNLLAVM 246
Query: 360 ESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
+ G+ Y M+ Y IGE + ++F M ++ + +V +Y+ +I+ LCK++
Sbjct: 247 TKE-GVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKR 305
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI-YGI 476
+ +L++E + M P +Y +L + + LG E + +P + Y
Sbjct: 306 VDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTS 365
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
L++L N++KA +F M ++ I N + ++ G A+K++ + +K
Sbjct: 366 LLDALCKNQNLDKATALFMKM-KERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVK 424
Query: 537 KYEIESAW 544
I + W
Sbjct: 425 GCRI-NVW 431
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 95/211 (45%), Gaps = 2/211 (0%)
Query: 327 GFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKS 386
G++ L ++++ +G+V+ + +++ + ++ + KIGE +
Sbjct: 75 GYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSA 134
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNM 446
L++ R +++R +V Y+ II+ LCK + L E G+ P + +Y L
Sbjct: 135 LKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYG 194
Query: 447 YLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV 505
+ G + + L L+ PN Y I +++L G +++A+ + M + + +
Sbjct: 195 FCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM-TKEGVKP 253
Query: 506 NTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
N S N ++ Y G+ A++++ M K
Sbjct: 254 NVVSYNTLMDGYCLIGEVQNAKQMFHTMVQK 284
>gi|413917008|gb|AFW56940.1| plastid transcriptionally active 12-like protein [Zea mays]
Length = 600
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/393 (20%), Positives = 160/393 (40%), Gaps = 63/393 (16%)
Query: 166 VYEWMMQQHWYRF---DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
+ EW+ QHW+ F DF + L GK F++ + + +G PS ++ L+
Sbjct: 126 ILEWLRTQHWWDFSEMDFLM---LVTAYGKLGDFSRAERVLKYMNKKGYQPSVISQTGLM 182
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
AY +A +++ RM Q G QP P + + ++LV KY ++AE I
Sbjct: 183 EAYGRGK---QYRKAEAVFRRM-QTSGPQPSPVTYQIILKSLVEG----DKY--KEAEAI 232
Query: 283 FHNLLT---SGLEIQKDIYSGLIWLHSYQDNIDKER------------------------ 315
F +LL + + + ++ +I+++ + + R
Sbjct: 233 FEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSF 292
Query: 316 ------ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
+S + +MQ+AG + +++ K E+A + +L++ +
Sbjct: 293 ETEYKEVSNIYDQMQRAGLKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKS 352
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
+ ++A+A G ++ +FR M+ + +Y ++ A E E +
Sbjct: 353 YNILLDAFAISGLVEEANTVFRAMRRHRVEPDLCSYTTMVLAYVNASEMNGAEKFFRRIK 412
Query: 430 ETGMKP-------LMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLK 482
E G+KP LM Y L N+ + +++R+ ++ PN+TIY +++
Sbjct: 413 EDGLKPNVVVYGTLMKGYSKLNNLEKVMRVYERMR------IQGVEPNQTIYTTIMDAQG 466
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILS 515
+ A F M + + + ++ NI+LS
Sbjct: 467 RNSDFGNAVIWFKEMEA-RGYPPDQKAKNILLS 498
>gi|359480144|ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Vitis vinifera]
gi|297744374|emb|CBI37344.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/379 (19%), Positives = 149/379 (39%), Gaps = 47/379 (12%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E+ +V+E + +Q WYR + + KL +GK ++ K +F +I++G V + +
Sbjct: 119 ESALKVFELLREQLWYRPNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAYTA 178
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ AY + G D+A S+ +M QP ++ L ++ L +
Sbjct: 179 LLSAYSRS---GLFDKAFSLLEKMKNTPDCQPDVHTYSVLIKSC------LQVVAFDKVP 229
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ ++ G++ Y+ LI + + +LL+ +++ E + S LR
Sbjct: 230 VLLSDMANQGIKPNTVTYNTLIDAYGKAKRFAEMESTLLEM-LREGKCEPDVWTMNSTLR 288
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
G +E EK + + + F +++Y K ++ K + MQ+ S
Sbjct: 289 AFGSSGQIETMEKCYEKFQSAGIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSW 348
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR----- 455
++ Y+ +I+ +A + + E L + +KP + +L Y G ++
Sbjct: 349 TIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEKIGGVL 408
Query: 456 ---------LHLAFSECL----------------------EKCRPNRTIYGIYLESLKNA 484
L + F CL + C+P++ Y +++ K
Sbjct: 409 RFIENSDVMLDIVFFNCLVDAYGRLGCFAEMKGVLEMMKKKGCKPDKITYRTMIKAYKIG 468
Query: 485 GNIEKAEEIFNHMH-SDQT 502
G A+E+ M D+T
Sbjct: 469 GMTSCAKELQGLMRMPDET 487
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 110/249 (44%), Gaps = 22/249 (8%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
+ER+ + + + G P+ ++++ LI Y S G LD+A S++N+M + G
Sbjct: 303 QERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSI---GNLDKASSLFNQM-KSSGQS 358
Query: 252 PRPSLHNSLFRAL--VSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
P + +N L G++ + + GL K Y+ L+ D
Sbjct: 359 PSLATYNILIAGFSEAKNSAGVTD--------MVREMEARGLSPSKVTYTILMDALVRSD 410
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE---SDNGIP 366
NI E+ + M++AG + ++ GD+++A K + L E N +
Sbjct: 411 NI--EKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVI 468
Query: 367 TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
+Y Y K G ++L + +EM E +V +Y+ I +LCK E+ E L+K
Sbjct: 469 YNTMIY---GYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLK 525
Query: 427 EFVETGMKP 435
+ +E G+KP
Sbjct: 526 DMIELGLKP 534
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 143/354 (40%), Gaps = 51/354 (14%)
Query: 219 HILI-VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
H+LI A ++A V+ L E Y + G P + N+L L+ + +
Sbjct: 81 HVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSN------FFE 134
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
+A +F+ T G ++ D+YS I + + ++ + +M++ G V +
Sbjct: 135 KAWRVFNE--TKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTT 191
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK---------------MEAYAKI-- 380
++ C K GD+E ++ + ++ E D + + Y +E Y K+
Sbjct: 192 LIDGCCKNGDIERGKQLFYKMGELD--VVANQYTYTVLINGFFKMGLKKDGIELYEKMKL 249
Query: 381 --------------------GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
G+ + E+F EM+ER + +V Y+ +I LC+
Sbjct: 250 TGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLE 309
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-PNRTIYGIYLE 479
E LM G+ P + SY L + Y ++G D+ F++ + P+ Y I +
Sbjct: 310 AERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIA 369
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A N ++ M + + + + + I++ A + S + KA +IY M
Sbjct: 370 GFSEAKNSAGVTDMVREMEA-RGLSPSKVTYTILMDALVRSDNIEKAFQIYSSM 422
>gi|169410877|gb|ACA57861.1| unknown [Trebouxia jamesii]
Length = 139
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 37/132 (28%)
Query: 565 LNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLY--------- 615
L L++ Q+E L G++LG +E+ + + ++F E S HS +LY
Sbjct: 5 LKLNALQKEVLFGVILGDAHLETQNNKITYRVKF---EQSSKHSAYIDHLYEIFKNFVKT 61
Query: 616 ------------DQYHEWLHPSF-------------KFWPKGRLVIPKLIHRWLTPRALA 650
DQ L+ F +F+ + + VIPKLIHRWLTPRALA
Sbjct: 62 EPKSKVVTYKNGDQNKTSLNIRFATISSNSFTFFGKQFYKENKKVIPKLIHRWLTPRALA 121
Query: 651 YWFMYGGHRTSV 662
YW+M G S
Sbjct: 122 YWYMDDGSMKSA 133
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 156/368 (42%), Gaps = 13/368 (3%)
Query: 134 ILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFA-LATKLADYMGK 192
+L+ + K +D TY+ E + YE+ +++ + + LA+ + +G+
Sbjct: 186 MLSFESKLCGSDDCTYIIRELGNRGECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGR 245
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
K + IF+ + G + F LI AY + G +EA S++N M + Y
Sbjct: 246 YGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRS---GLHEEAISVFNSMKE---YGL 299
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
RP+L + A++ G + Q A+F F + + ++ + ++ L+ + S +
Sbjct: 300 RPNL--VTYNAVIDACGKGGMEFKQVAKF-FDEMQRNCVQPDRITFNSLLAVCSRGGLWE 356
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
R L EM E+ ++L K G ++ A + ++ ++
Sbjct: 357 AARN--LFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYST 414
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++ +AK G F ++L +F EM+ + +Y+ ++ + K +E +++E G
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAE 491
+K + +Y L Y G +D + F+E E PN Y ++ G ++A
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 492 EIFNHMHS 499
E+F S
Sbjct: 535 EVFREFKS 542
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAK 379
+EM G ++ ++L K+G ++ +K + + + ++ +P + ++ Y+K
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEM-KREHVLPNLLTYSTLIDGYSK 526
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
G + +++E+FRE + A V Y +I+ LCK SL+ E + G+ P + +
Sbjct: 527 GGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 440 YINLTNMY 447
Y ++ + +
Sbjct: 587 YNSIIDAF 594
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 127/293 (43%), Gaps = 21/293 (7%)
Query: 241 YNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF-IFHNLLTSG-LEIQKDIY 298
++ ++L QP + +L GL K A F +F ++ +G Y
Sbjct: 33 FDASLELAHAQPDVVSYTTLI-------NGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTY 85
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+ L+ QD +D R + E ++ F +++ + G V++A T+ ++
Sbjct: 86 NALVDGLCKQDRLDAARAVI--AEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQM 143
Query: 359 LESDNGIPT-PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
E + +PT +F + + +LE+F EM +R ++ Y +I+ LCK+++
Sbjct: 144 TE-EGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQ 202
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTIYGI 476
+ + L+ V G +P + +Y L + G D L L + C P+ Y +
Sbjct: 203 LDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTV 262
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
++ L G ++ A EIF + +++ S N++ + L G + +A ++
Sbjct: 263 VIDKLCKVGRVDDAHEIFRELVANKC------SPNVVTYSALIGG-YCRASRV 308
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 117/310 (37%), Gaps = 26/310 (8%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
+ F ++ M+ R + L D + K+ + R + + + P +T++
Sbjct: 63 DAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNT 122
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ A G +DEA + + +M + GY P N++ L L A
Sbjct: 123 LMAALFQL---GRVDEALATFTQMTE-EGYVPTLVSFNAIITGLCRA------RRLADAL 172
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+F+ ++ YS +I D +D+ + LL + + + + V + L
Sbjct: 173 EVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQ-QLLDRMVSEGCRPD--LVAYTPLV 229
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
+ D+ LR + S IP + ++ K+G + EIFRE+ S
Sbjct: 230 LGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCS 289
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
+V Y +I C+A + +M+E P+ + M L M DR A
Sbjct: 290 PNVVTYSALIGGYCRASRVDEGGKVMREMA------CRPNVVTYNTMIWGLSMVDRNEEA 343
Query: 460 F------SEC 463
+ SEC
Sbjct: 344 YGMFREMSEC 353
>gi|449464322|ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Cucumis sativus]
Length = 760
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 88/438 (20%), Positives = 187/438 (42%), Gaps = 29/438 (6%)
Query: 119 LCKELPSHKGGTLVRILNAQKKWLRQEDG--TYLAVHCMRIRENETGFRVYEWMMQQHWY 176
+CK + + + T R+ N+ + + Q D Y +H + E+ F + W+ + +
Sbjct: 95 ICKMMANREWTT--RLQNSIRSLVPQFDHNLVYNVLHAAKKSEHALNF--FRWVERAGLF 150
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
+ D K+ + +G+ K R I D+ N+G E F +LI +Y A G + E
Sbjct: 151 QHDRETHFKIIEILGRASKLNHARCILLDMPNKGVQWDEDLFVVLIESYGKA---GIVQE 207
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
A I+ +M +LG + S +++LF+ ++ + +Y + A+ F+ +L G+E +
Sbjct: 208 AVKIFQKMKELGVERSVKS-YDALFKEIMRR----GRYMM--AKRYFNAMLNEGIEPIRH 260
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
Y+ ++W + ++ E ++M+ G +++ + +E+AE+ +
Sbjct: 261 TYNVMLW--GFFLSLRLETAKRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFT 318
Query: 357 RLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
++ N PT ++ ++ Y + +L +F EM+ + Y ++ LC A
Sbjct: 319 E-MKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDA 377
Query: 416 EETELTESLMKEFVETGMKPLMPS-YINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI- 473
E+ ++ E V P S ++ L + G D + P
Sbjct: 378 EKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGH 437
Query: 474 YGIYLESLKNAGNIEKAEEIFNH-------MHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
YGI +E+ AG ++A ++ + + T+ + + N+I+ + G KA
Sbjct: 438 YGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKA 497
Query: 527 EKIYDLMCLKKYEIESAW 544
+ + + K + E A+
Sbjct: 498 DTFFRQLLKKGIQDEVAF 515
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 134/317 (42%), Gaps = 16/317 (5%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T+L +GK + + + D++ G P + + L+ + G + + N
Sbjct: 307 TELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLM------NILGKVGRVEELTNV 360
Query: 244 MIQLGGYQPRPSL--HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
++G ++ P++ +N++ +AL SK ++ + F + + + YS L
Sbjct: 361 FSEMGMWRCTPTVVSYNTVIKALFE-----SKAHVSEVSSWFDKMKADSVSPSEFTYSIL 415
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
I + + + E+ LL +EM + GF S++ K E A + + L E+
Sbjct: 416 IDGYCKTNRV--EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKEN 473
Query: 362 DNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
+ + + ++ + K G+ +++++F EM+ + V AY+ ++ + KA
Sbjct: 474 FGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEA 533
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLES 480
SL+++ E G + + S+ + N + G+ R F +P+ Y L
Sbjct: 534 NSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGC 593
Query: 481 LKNAGNIEKAEEIFNHM 497
+AG E+A + M
Sbjct: 594 FAHAGMFEEAARMMREM 610
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
Y K+G+ K+L++F EM+ S +V Y ++I+ L KA + K+ + G+ P
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPD 337
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESL-KNAGNIEKAEEIF 494
+ NL N+ +G + L FSE + +C P Y +++L ++ ++ + F
Sbjct: 338 VVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWF 397
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
+ M +D ++ + + +I++ Y + KA
Sbjct: 398 DKMKAD-SVSPSEFTYSILIDGYCKTNRVEKA 428
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 141/346 (40%), Gaps = 24/346 (6%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ +T++ LI + A G D A ++ +M + G QP N+L GL
Sbjct: 391 PNTVTYNCLIDGFFKA---GNFDRAHELFRQMNE-EGVQPNVITLNTLV-------DGLC 439
Query: 273 KY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEG 331
K+ + +A F+ + GL+ Y+ LI +NI++ +EM +G
Sbjct: 440 KHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCF--EEMLSSGCSPD 497
Query: 332 KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFR 391
V S++ G + DA +L + + + + + K + + E+
Sbjct: 498 AVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLT 557
Query: 392 EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
EM+E Y+ +I L K + +M++ ++ G++P + +Y + + Y +
Sbjct: 558 EMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKK 617
Query: 452 MHDRLHLAFSE--CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
D F E K PN IY I +++L ++++A + M + + NT +
Sbjct: 618 NVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKR-VRPNTTT 676
Query: 510 CNIILSAYLSSGDFVKAEKIYDLM----CLKKY---EIESAWMEKL 548
N IL KA ++ D M C Y E+ + W+ +
Sbjct: 677 YNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAV 722
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 159/399 (39%), Gaps = 49/399 (12%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D A L ++G+ R + ++ ++ + PS +TF IL+ A +DEA
Sbjct: 280 DAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARR---IDEAL 336
Query: 239 SIYNRMIQLG-----GYQPRPSLHNSLFRALV---SKPGGLSKY------YLQQAEFIFH 284
+++R+ G G +P L N+L L + GLS + + + +
Sbjct: 337 QVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTY 396
Query: 285 NLLTSGL----------EI-----QKDIYSGLIWLHSYQDNIDK----ERISLLKKEMQQ 325
N L G E+ ++ + +I L++ D + K R EM+
Sbjct: 397 NCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKG 456
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEF 383
G + +++ ++ A + + +L S G A VY + G
Sbjct: 457 KGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSS--GCSPDAVVYYSLISGLCIAGRM 514
Query: 384 MKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINL 443
+ + +++ S Y+ +I CK ++ E L+ E ETG+KP +Y L
Sbjct: 515 NDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTL 574
Query: 444 TNMYLNLGMHDRLHLAFSECLEK-----CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
+ LG A S+ +EK RP+ YG + + + N+++ +IF M
Sbjct: 575 ISY---LGKTGDFATA-SKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMC 630
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
S + NT NI++ A + D +A + + M +K+
Sbjct: 631 STSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKR 669
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 126/314 (40%), Gaps = 30/314 (9%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + K + + + F+++ +G + T+ LI A+ ++ A + M+
Sbjct: 434 LVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGV---NNINRAMQCFEEML 490
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
G P ++ SL L + A + L +G + + Y+ LI
Sbjct: 491 S-SGCSPDAVVYYSLISGLCIAG------RMNDASVVVSKLKLAGFSLDRSCYNVLISGF 543
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+ + ER+ L EM++ G + +++ K GD A K ++++
Sbjct: 544 CKKKKL--ERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRP 601
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA----YHKIIELLCKAEETELT 421
+ + AY + ++IF EM ++ VP Y+ +I+ LC+ + +
Sbjct: 602 SVVTYGAIIHAYCSKKNVDEGMKIFGEM---CSTSKVPPNTVIYNILIDALCRNNDVDRA 658
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR--LHLAFS----ECLEKCRPNRTIYG 475
SLM++ ++P +Y N L G+ D+ LH AF E CRP+
Sbjct: 659 ISLMEDMKVKRVRPNTTTY----NAILK-GVRDKKMLHKAFELMDRMVEEACRPDYITME 713
Query: 476 IYLESLKNAGNIEK 489
+ E L G IEK
Sbjct: 714 VLTEWLSAVGEIEK 727
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 128/316 (40%), Gaps = 26/316 (8%)
Query: 233 CLDEACSIYNRMI---QLGGYQPRPSLHNSLFRALV-SKPGGLSKYYLQQAEFIFHNLLT 288
CL+ A + + ++ QL P L + L R L+ S G + + L +
Sbjct: 150 CLENARLVNDSLLLFNQLDPSSKSPQLCHGLLRVLLKSGRAGDALHVLDEMP-----QAN 204
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCA--KEG 346
SG + +I G + + S + D E + L+ K ++ F +G ++ V ++C K G
Sbjct: 205 SGFSVTGEIVFGEL-VRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNG 263
Query: 347 DVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSL-EIFREMQERLGSASVPAY 405
+ +RL G A + + G +K + E+ EM++R SV +
Sbjct: 264 VAWEVLHCVMRL----GGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTF 319
Query: 406 HKIIELLCKAEETELTESLMKEFVE------TGMKPLMPSYINLTNMYLNLGMH-DRLHL 458
++ LCKA + + G++P + + L + +G D L L
Sbjct: 320 GILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSL 379
Query: 459 AFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
+ RPN Y ++ AGN ++A E+F M+ ++ + N + N ++
Sbjct: 380 LEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMN-EEGVQPNVITLNTLVDGL 438
Query: 518 LSSGDFVKAEKIYDLM 533
G +A + ++ M
Sbjct: 439 CKHGRVHRAVEFFNEM 454
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 16/253 (6%)
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
E + ++ ++ +G +P +T +ILI Y G A + + M+ G QP
Sbjct: 369 EGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRC---GDAKRAFGLLDEMVG-KGIQP 424
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+ SL L + +++A+ +F + GL +++ LI H NID
Sbjct: 425 TLVTYTSLIYVLGKR------NRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNID 478
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
R L KEM + ++++ +EG VE+A + + GI Y
Sbjct: 479 --RAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEM--KRRGIKPDHISY 534
Query: 373 K--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
+ Y+K G+ + + EM ++ Y+ +I+ LCK +E E E L+KE V
Sbjct: 535 NTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVS 594
Query: 431 TGMKPLMPSYINL 443
G+ P +Y+++
Sbjct: 595 KGITPDDSTYLSI 607
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 149/352 (42%), Gaps = 20/352 (5%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQE 395
++ V KEG ++ A K ++ +E+ G+ Y + + G+F ++ IF+ M++
Sbjct: 222 MINVLCKEGKLKKA-KEFIGHMET-LGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKD 279
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
+ Y+ I LCK E L+ + +E G+ P +Y L + Y N G D+
Sbjct: 280 KGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDK 339
Query: 456 LHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
+ E + K + Y +++ +L G + A+ + M ++ + + + NI++
Sbjct: 340 AYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMR-EKGMMPDAVTHNILI 398
Query: 515 SAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQREN 574
+ Y GD +A + D M K + L YVL R +K+ +L S Q+E
Sbjct: 399 NGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLG-KRNRMKEADAL-FSKIQQEG 456
Query: 575 LI------GLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEWLHPSFKF 628
L+ L+ G C + R +++ E M + Y+ + K
Sbjct: 457 LLPDIIVFNALIDGHCANGNIDRAFQLLK----EMDNMKVLPDEITYNTLMQGYCREGKV 512
Query: 629 WPKGRLVIPKLIHRWLTPRALAYWFMYGGHRTSVGDILLKLKVSSEGIALVF 680
+ R ++ ++ R + P ++Y + G+ + GD+ +V E + F
Sbjct: 513 -EEARQLLDEMKRRGIKPDHISYNTLISGY-SKRGDMKDAFRVRDEMMTTGF 562
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 117/278 (42%), Gaps = 14/278 (5%)
Query: 253 RPSLHN-SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
R SL+ ++ ++ K G L K EFI H + T G++ Y+ +I H +
Sbjct: 213 RSSLYTFNIMINVLCKEGKLKK----AKEFIGH-METLGVKPNVVTYNTIIHGHCLRGKF 267
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
+ R+ + + M+ G E S + KEG +E+A ++LE G+ A
Sbjct: 268 QRARV--IFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEG--GLVPNAVT 323
Query: 372 YK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
Y ++ Y G+ K+ EM + AS+ Y+ I L ++++KE
Sbjct: 324 YNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMR 383
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIE 488
E GM P ++ L N Y G R E + K +P Y + L ++
Sbjct: 384 EKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMK 443
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
+A+ +F+ + + + + N ++ + ++G+ +A
Sbjct: 444 EADALFSKIQQEGLLP-DIIVFNALIDGHCANGNIDRA 480
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 160/412 (38%), Gaps = 86/412 (20%)
Query: 269 GGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
G S+ L++AE +F +++ G+ IY LI H+Y + + L +M G
Sbjct: 306 GFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALI--HAYCKAGNLLQAVALHNDMVSNGI 363
Query: 329 EEGKEVLLSVLRVCAKEG---DVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEF 383
+ ++ S+L+ + G +V D K + D+GI +Y + +A K+G+
Sbjct: 364 KTNCVIVSSILQCLCEMGMASEVVDQFKEF-----RDSGIFLDEVLYNIVVDALCKLGKV 418
Query: 384 MKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINL 443
+++E+ EM+ R S V Y +I C + +++ +E E G++P + +Y L
Sbjct: 419 EEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNIL 478
Query: 444 TNMYLNLGMHDRLHLAFSECL--EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS-- 499
+ G+ L +C+ + +PN + +E L AG +++AE N +
Sbjct: 479 VGGFSRNGLKKE-ALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKC 537
Query: 500 --------DQTIGVN-TRSCNIILSAYLSSGDFVKAEKIYDL---MCLK-KYEIESAWME 546
D N TR + S G VK + + L +C++ +Y+ +E
Sbjct: 538 LENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLE 597
Query: 547 KLDYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRM 606
++ L L E + + G L+G C + D KR
Sbjct: 598 RM----------------LALDVEPNQIMYGKLIGAFCRDGDMKR--------------- 626
Query: 607 HSVLRRYLYDQYHEWLHPSFKFWPKGRLVIPKLIHRWLTPRALAYWFMYGGH 658
+LV L+ R +TP + Y M G+
Sbjct: 627 -------------------------AQLVFDMLVERGITPDVITYTMMINGY 653
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 69/370 (18%), Positives = 147/370 (39%), Gaps = 33/370 (8%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
K +++F+++ +G P +T++IL+ + G EA + + I G +P
Sbjct: 452 KLVDAKNMFEEMKERGIEPDIVTYNILVGGF---SRNGLKKEALELLD-CIGTQGLKPNS 507
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
+ HN + L +++AE + L LE + G + N ++
Sbjct: 508 ATHNRIIEGLCMAGK------VKEAEAFLNTLEDKCLENYSAMVDGYC-----KANFTRK 556
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM 374
L + + + G K+ +L EG+ + A R+L D + +
Sbjct: 557 AYELFSR-LSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLI 615
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
A+ + G+ ++ +F + ER + V Y +I C+ + + E G+K
Sbjct: 616 GAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIK 675
Query: 435 PLMPSYINLTNMYLNLGMHDRLHLAFSECLEK----------------CRPNRTIYGIYL 478
P + +Y + + + + + L FS+ E+ +P+ Y + +
Sbjct: 676 PDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLI 735
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKY 538
+S N++ A +++ M + + + + + +LS+ S GD +A + + M K
Sbjct: 736 DSHCKTNNLQDAINLYDEMIA-RGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGI 794
Query: 539 EIESAWMEKL 548
E +S M L
Sbjct: 795 EPDSRAMSVL 804
>gi|357135236|ref|XP_003569217.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Brachypodium distachyon]
Length = 644
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 132/323 (40%), Gaps = 50/323 (15%)
Query: 142 LRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRD 201
L+ +D + H IR+ + +V+ WM Q+H + A + Y+G R A+
Sbjct: 77 LQTQDCNIILRHYGDIRKWDALSKVFRWM-QEHEM-LNVASYSSYFKYLGLSRNAARALQ 134
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCL------DEACSIYNRMIQLGGYQPRPS 255
++ I +Q I + + V GCL D +Y+ MI+ GG P
Sbjct: 135 VYGSIQDQS---------IRVHVSVCNSVLGCLVKNGRYDSTFKLYDEMIR-GGLSPDLF 184
Query: 256 LHNSLFRALVSKPGGLSKY------------------------------YLQQAEFIFHN 285
+++L + G +K Y ++AE F
Sbjct: 185 TYSTLLSGCIKLKQGYAKAMELINELNYRGLQMDSVIYGTLLAICASHNYCEEAEVYFQK 244
Query: 286 LLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKE 345
L G YS L L++Y +N + E+ LL K+++ + K +L ++L+V +K
Sbjct: 245 LKDEGHNPNLFHYSSL--LNAYSENSNYEKAELLMKDLRSSKLIPNKVILTTLLKVYSKG 302
Query: 346 GDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
G E A++ L S + ++A AK G+ ++ +F EM+E+ + A+
Sbjct: 303 GLFEKAKELLTELEASGFAQDEMPYCILIDALAKGGKIWEATMLFNEMKEKGVKSDGYAF 362
Query: 406 HKIIELLCKAEETELTESLMKEF 428
+I L +A E + L KEF
Sbjct: 363 SIMISALHRAGYREEAKQLAKEF 385
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 142/335 (42%), Gaps = 24/335 (7%)
Query: 159 ENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTF 218
+ E F +Y+ M ++ DF + + + K + ++ +D ++ +G +P+ MT+
Sbjct: 518 DTEYAFGLYDRMRGENIAPSDFT-CNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTY 576
Query: 219 HILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQ 278
+ +I ++ +G ++ A ++Y M ++G P + +L G +
Sbjct: 577 NCIIDGFVK---EGSVNSALAVYTEMCKIG-VSPNVFTYTNLIN------GFCKSNNMDL 626
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
A + + G+E+ +Y LI + D S L E+Q+ G K V S+
Sbjct: 627 ALKVMDEMKNKGIELDVTVYCALI--DGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSM 684
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQER 396
+ K ++E A R++ + GIP +Y + K G+ + + E++ EM +
Sbjct: 685 ISGFRKLQNMEAALHLHKRMI--NEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAK 742
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL---NLGMH 453
+ Y +I LC + E + ++++ M P + Y L + NL
Sbjct: 743 GIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEA 802
Query: 454 DRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNI 487
RLH +E L+K P+ T Y I + GN+
Sbjct: 803 FRLH---NEMLDKGLVPDDTTYDILVNGKVKDGNL 834
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 158/386 (40%), Gaps = 20/386 (5%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
C + + + +Y M + F + + + Y+ K R + +FD+ + G +
Sbjct: 374 CCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYL-KARSPEEASKLFDEAVACG-IA 431
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK 273
+ T++ L+ ++L +G + EACSI+ +M++ G +P +N++ G +
Sbjct: 432 NVFTYNSLL-SWLCK--EGKMSEACSIWEKMVR-KGVRPSVVSYNNMIL------GHCQQ 481
Query: 274 YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKE 333
+ A +F +L GL+ YS + + Y D E L M+
Sbjct: 482 GDMDSANGVFVEMLEKGLKPNLITYS--VLMDGYFKKGDTEYAFGLYDRMRGENIAPSDF 539
Query: 334 VLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFR 391
++ K G +++ +L++ + IPT Y ++ + K G +L ++
Sbjct: 540 TCNIIINGLCKAGRTSESQDRLKKLVQ-EGFIPT-CMTYNCIIDGFVKEGSVNSALAVYT 597
Query: 392 EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
EM + S +V Y +I CK+ +L +M E G++ + Y L + + G
Sbjct: 598 EMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKG 657
Query: 452 MHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC 510
SE E PN+ +Y + + N+E A + M ++ I + +
Sbjct: 658 DMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRM-INEGIPCDLQIY 716
Query: 511 NIILSAYLSSGDFVKAEKIYDLMCLK 536
++S L G + A ++Y M K
Sbjct: 717 TTLISGLLKEGKLLFASELYAEMLAK 742
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 143/359 (39%), Gaps = 19/359 (5%)
Query: 177 RFDFALATKLADYM----GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQG 232
R DF +++ +Y+ K ++ D F+ +I + VP +I +LS V+
Sbjct: 147 RLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNI----FLSELVKN 202
Query: 233 -CLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGL 291
+ EA +YN+M G + + + + RA + + L++AE F G+
Sbjct: 203 NMIREARDVYNKMAS-KGVKGDCATISVMIRA------SMREGKLEEAEGWFREAKNKGV 255
Query: 292 EIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
E+ YS I + + D L +EM+ G+ + + V+ VC K+G + +A
Sbjct: 256 ELDARAYS--IVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEA 313
Query: 352 EKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
K +L + M+ Y K G+ +LE+F +M E + Y IIE
Sbjct: 314 VKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEW 373
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNR 471
CK + + + + P + + +L YL + F E + N
Sbjct: 374 CCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANV 433
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
Y L L G + +A I+ M + + + S N ++ + GD A ++
Sbjct: 434 FTYNSLLSWLCKEGKMSEACSIWEKMVR-KGVRPSVVSYNNMILGHCQQGDMDSANGVF 491
>gi|255572205|ref|XP_002527042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533604|gb|EEF35342.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 520
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 147/351 (41%), Gaps = 70/351 (19%)
Query: 226 LSAPVQGCL-DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
++A + C+ EA +++R++Q QP + S+ +A GGL +Y I
Sbjct: 1 MAAYTKNCMYTEALELFDRLLQYPYLQPDSFTYPSVLKAC----GGLGRY--DYGRMIHT 54
Query: 285 NLLTSGLEIQKDIYSGLIWLHS------------------------------YQDNIDKE 314
+L+ SG + S L+ LH+ YQD ++
Sbjct: 55 HLIKSGFVFDIVVASSLVSLHAKCNLFGYAIQLFDEMPERDVACWNTVISCYYQDGKAEK 114
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK- 373
+ + K M+ +GFE L +V+ CA+ D+E ++ +++ NG+ FV
Sbjct: 115 ALEMFGK-MRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQ--NGMVLDGFVGSA 171
Query: 374 -MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++ Y K G + +IF +M ++ ++ A++ +I A +++ ++ F
Sbjct: 172 LVDMYGKFGCLDLAKDIFEQMPKK----TLVAWNSLIAGYSSAADSK---ECIELFWRMN 224
Query: 433 MKPLMPSYINLTNMYLNLG-----MHDRLHLAFSECLEKCRPNRTIYGIYLES-----LK 482
M+ P+ L+++ L H R ++ NR I++ S
Sbjct: 225 MEGTKPTVTTLSSILLACSRAAHLQHGRFIHGYA------VRNRVQLDIFVSSGLIELYF 278
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G ++ AE IF + N N+++S Y++ GD+VKA +YD M
Sbjct: 279 KCGKVQSAENIFYMLPK-----ANVVLWNVMISGYVTIGDYVKALDMYDEM 324
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 154/402 (38%), Gaps = 95/402 (23%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
C R+ + E G ++ +MQ D + + L D GK C D+ DI Q
Sbjct: 141 CARLLDLERGKEIHREVMQNGMV-LDGFVGSALVDMYGK----FGCLDLAKDIFEQMPKK 195
Query: 214 SEMTFHILIVAYLSA-------------------PVQGCLDE---ACS-----IYNRMIQ 246
+ + ++ LI Y SA P L ACS + R I
Sbjct: 196 TLVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTTLSSILLACSRAAHLQHGRFIH 255
Query: 247 LGGYQPRPSLHNSLFRALVSKPGGLSKYY-----LQQAEFIFHNLLTSGLEIQKDIYSGL 301
GY R + +F + GL + Y +Q AE IF+ L + + + + SG
Sbjct: 256 --GYAVRNRVQLDIFVS-----SGLIELYFKCGKVQSAENIFYMLPKANVVLWNVMISGY 308
Query: 302 IWLHSYQ---DNIDKERI-----------SLLKKEMQQAGFEEGKE-------------- 333
+ + Y D D+ +I S+L Q A E+GKE
Sbjct: 309 VTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLAALEKGKEIHNCITKNDLETNE 368
Query: 334 -VLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
V+ ++L + AK G V++A + +L E D ++ + AY G+ +++L +F E
Sbjct: 369 IVMGALLDMYAKCGAVDEALSVFNKLPERD----LLSWTSIISAYGSHGQALEALRLFEE 424
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET-GMKPLMPSYINLTNMYLNLG 451
+Q+ S + ++ A + + + G+KP + Y L ++ LG
Sbjct: 425 LQQSKASPDAVTFLAVLSACSHAGLVDKGYYYFNQMITNYGIKPGLEHYSCLIDL---LG 481
Query: 452 MHDRLHLAFSECLEKCRPNR-----------TIYGIYLESLK 482
R+ E E PNR ++ G+YLE +K
Sbjct: 482 ---RIQEQSQELNEIPCPNRAEKYYLLYLSGSLAGLYLEDMK 520
>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 882
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 128/318 (40%), Gaps = 43/318 (13%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+++++ + W+ +Q + D T + +G+ R+F + + ++ G P+
Sbjct: 362 QLQDHSVALSFFYWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNV 421
Query: 216 MTFHILIVAYLSAPV-------------QGC-------------------LDEACSIYNR 243
+T++ LI +Y A GC LD A S+Y R
Sbjct: 422 VTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYER 481
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M ++G P ++ + L K G LS A +F ++ G Y+ LI
Sbjct: 482 MQEVG-LSPDTFTYSVMINCL-GKSGNLSA-----AHRLFCEMVDQGCVPNIVTYNILIA 534
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
L + N + L ++MQ AGF+ K V+ V G +E+AE + ++ +N
Sbjct: 535 LQAKARNY--QTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFE-MKQNN 591
Query: 364 GIPT-PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+P P + ++ + K G K+ E + M +VP + ++ +
Sbjct: 592 WVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPDAY 651
Query: 423 SLMKEFVETGMKPLMPSY 440
+L++ V G+ P + +Y
Sbjct: 652 NLLQNMVTLGLNPSLQTY 669
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 108/241 (44%), Gaps = 10/241 (4%)
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ ++ G + Y+ LI HSY + N E +++ +MQ+ G E + +++
Sbjct: 408 LLEQMVKDGCQPNVVTYNRLI--HSYGRANYLGEALNVFN-QMQEMGCEPDRVTYCTLID 464
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLG 398
+ AK G ++ A + R+ E G+ F Y + K G + +F EM ++
Sbjct: 465 IHAKAGFLDVAMSMYERMQEV--GLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGC 522
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
++ Y+ +I L KA + L ++ G KP +Y + + G +
Sbjct: 523 VPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEA 582
Query: 459 AFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
F E + P+ +YG+ ++ AGN+EKA E ++ M + N +CN +LSA+
Sbjct: 583 VFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLL-PNVPTCNSLLSAF 641
Query: 518 L 518
L
Sbjct: 642 L 642
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 182/450 (40%), Gaps = 52/450 (11%)
Query: 158 RENETG--FRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+E ETG ++ M +Q + D + D + K R K + + G P
Sbjct: 277 KEGETGKACSLFHEMTRQ-GVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDT 335
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+T++ +I Y + G L EA ++ +M + G P + NS +L G SK
Sbjct: 336 VTYNCMIHGYATL---GRLKEAAKMFRKM-KSRGLIPNIVICNSFLASLCKH--GRSK-- 387
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+A IF ++ G + DI S LH Y + L M+ G V
Sbjct: 388 --EAAEIFDSMTAKGH--KPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVF 443
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
++ AK G V+DA + + + + + A++++G ++E F +M
Sbjct: 444 NILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVA 503
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM-KPLMPSYINLTNMYLNLG--- 451
R + YH II+ C + L+ E + G+ +P + + ++ N G
Sbjct: 504 RGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVM 563
Query: 452 -MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC 510
HD L ++ E RP+ + ++ G ++KA +I + M + +GV T
Sbjct: 564 DAHDIFDLV-TDIGE--RPDVITFTSLIDGYCLVGKMDKAFKILDAM---EVVGVET--- 614
Query: 511 NIILSAYLSSGDFVKAEKIYDLMCLKK-------------YEIESAWMEKLDYVLSLNRK 557
+I+ + L G F K +I D + L + Y I A + + ++ +K
Sbjct: 615 DIVTYSTLLDGYF-KNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKK 673
Query: 558 ---EVKKPVSLNLSSEQRENLIGLLLGGLC 584
++ ++ +S + G++LGGLC
Sbjct: 674 FHEMIESGTTVTVS------IYGIILGGLC 697
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 111/263 (42%), Gaps = 21/263 (7%)
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR- 340
+F +L +GL+I + S L+ Y N +E +++L M + G +L+
Sbjct: 179 LFGCILRTGLKIHQITASTLLKCLCYA-NRTEEAVNVLLHRMSELGCVPNVFSYSIILKG 237
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKSLEIFREMQERL 397
+C + + +++ + G +P A+ + + K GE K+ +F EM +
Sbjct: 238 LC--DNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQG 295
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
V Y+ II+ LCKA + E ++++ G +P +Y + + Y LG
Sbjct: 296 VKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAA 355
Query: 458 LAFSECLEKCR---PNRTIYGIYLESLKNAGNIEKAEEIFNHM----HSDQTIGVNTRSC 510
F + K R PN I +L SL G ++A EIF+ M H + T
Sbjct: 356 KMFRK--MKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCT--- 410
Query: 511 NIILSAYLSSGDFVKAEKIYDLM 533
+L Y S G F +++ M
Sbjct: 411 --LLHGYASEGWFADMIGLFNSM 431
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 109/269 (40%), Gaps = 4/269 (1%)
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
Q+A +F + G ++ + +H + + + L EM + G +
Sbjct: 245 QRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYN 304
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
++ K ++ AE LR + ++ P T + + YA +G ++ ++FR+M+
Sbjct: 305 LIIDALCKARAMDKAE-LVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKS 363
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHD 454
R ++ + + LCK ++ + G KP + SY L + Y + G D
Sbjct: 364 RGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFAD 423
Query: 455 RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
+ L S + ++ I + + G ++ A IF M Q + + + + ++
Sbjct: 424 MIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQ-QQGVSPDVVTYSTVI 482
Query: 515 SAYLSSGDFVKAEKIYDLMCLKKYEIESA 543
SA+ G A + ++ M + + +A
Sbjct: 483 SAFSRMGRLTDAMEKFNQMVARGIQPNTA 511
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 96/483 (19%), Positives = 170/483 (35%), Gaps = 97/483 (20%)
Query: 126 HKGGTLVRILNAQKKWLRQED----------GTYLAVHCMRIRENETGFRVYEWMMQQHW 175
H TL R+ A K + + + ++LA C R E +++ M +
Sbjct: 343 HGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAA-EIFDSMTAK-G 400
Query: 176 YRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLD 235
++ D L E FA +F+ + + G F+ILI AY +G +D
Sbjct: 401 HKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAK---RGMVD 457
Query: 236 EACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQK 295
+A I+ M Q G P ++++ A S+ G L+ A F+ ++ G++
Sbjct: 458 DAMLIFTEM-QQQGVSPDVVTYSTVISAF-SRMGRLT-----DAMEKFNQMVARGIQPNT 510
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL-SVLRVCAKEGDVEDAEKT 354
+Y +I + K + L EM G V SV+ K+G V DA
Sbjct: 511 AVYHSIIQGFCMHGGLVKAK--ELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDI 568
Query: 355 W-------------------------------LRLLESDN--GIPTPAFVYK--MEAYAK 379
+ ++L++ G+ T Y ++ Y K
Sbjct: 569 FDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFK 628
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
G L +FREMQ + + Y ++ L +A T E +E+G +
Sbjct: 629 NGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSI 688
Query: 440 Y----------------------INLTNMYLNLGMHDRLHLAFSECLEK----------- 466
Y + N+ ++ + + + A + K
Sbjct: 689 YGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATIS 748
Query: 467 ---CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
PN + YG+ + +L G +E A +F+ M + +R N I+ L G+
Sbjct: 749 ASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVP-GSRLLNRIIRMLLEKGEI 807
Query: 524 VKA 526
KA
Sbjct: 808 AKA 810
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 100/470 (21%), Positives = 190/470 (40%), Gaps = 39/470 (8%)
Query: 100 EVIELEELPEQWRRAKLAWLCKELPSHKGGT-----LVRILNAQKKWLRQEDGTYLAVHC 154
E +EL E EQ R+ A+ + G +L QK + + +A +C
Sbjct: 73 EAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKA--KGSIPSVIAYNC 130
Query: 155 M-----RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQ 209
+ + R E R++E M + + L D + +E K +I DD+
Sbjct: 131 ILTCLGKKRRVEEALRIFEEMKRDAVP--NVPTYNILIDMLCREGKLNAALEIRDDMERA 188
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL-FRALVSKP 268
G P+ +T +I+I A L+EACSI+ G + N++ F +L+
Sbjct: 189 GLFPNVLTVNIMIDRLCKAQK---LEEACSIFE------GMDDKVCTPNAVTFSSLIDGL 239
Query: 269 GGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
G + + A ++ +L G +Y+ LI S+ KE + KEM G
Sbjct: 240 GKCGR--VDDAYSLYEKMLDCGHVPGAIVYTSLI--RSFFKCGRKEDGHKIYKEMVHTGC 295
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSL 387
++ + + K G+ E + R + + IP ++ + K G ++
Sbjct: 296 SPDLTLINTYMDCVFKAGETEKG-RALFREINAHGFIPDARSYSILIHGLVKAGLANETY 354
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
E+F M+E+ AY+ +I+ CK+ + L++E G P + +Y ++ +
Sbjct: 355 ELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGL 414
Query: 448 LNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN 506
+ D ++ F E + N +Y ++ G I++A I + + + N
Sbjct: 415 AKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQ-KGLTPN 473
Query: 507 TRSCNIILSAYLSSGDFVKAEKIYD-LMCLKKYEIESAWMEKLDYVLSLN 555
+ N +L A VKAE+I + L+C + + ++ Y + +N
Sbjct: 474 VYTWNCLLDA------LVKAEEINEALICFQSMKDLKCPPNQITYSILIN 517
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 154/393 (39%), Gaps = 58/393 (14%)
Query: 150 LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMG----------KERKFAKC 199
L +C++ R+ F + + M++ +R F+ T L +G K + +
Sbjct: 16 LVANCVKSRKLREAFDIIQ-TMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEA 74
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
++F+ + +VP ++ +I+ Y SA G DEA + R + G P +N
Sbjct: 75 VELFEQLEQNRKVPCAYAYNTMIMGYGSA---GKFDEAYGLLERQ-KAKGSIPSVIAYNC 130
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNL-----------------------LTSGLEIQKD 296
+ L K +++A IF + L + LEI+ D
Sbjct: 131 ILTCLGKK------RRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDD 184
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKE---------VLLSVLRVCAKEGD 347
+ ++ + NI +R+ +K + EG + S++ K G
Sbjct: 185 MERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGR 244
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
V+DA + ++L D G A VY + ++ K G +I++EM S +
Sbjct: 245 VDDAYSLYEKML--DCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLI 302
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE 465
+ ++ + KA ETE +L +E G P SY L + + G+ + + F E
Sbjct: 303 NTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKE 362
Query: 466 K-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ C + Y ++ +G + KA ++ M
Sbjct: 363 QGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEM 395
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 150/373 (40%), Gaps = 57/373 (15%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
++ D+I G P TF++LI + + LD A ++++M + G QP L
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCES---NALDHARELFDKMSE-KGCQPNKFTVGILV 193
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD-NIDKERISLLK 320
R G +K Q EF+ + G + + +Y+ L+ QD N + E+ L
Sbjct: 194 RGFCR--AGRTK---QALEFVDGKM---GGNVNRVVYNTLVSSFCKQDMNDEAEK---LV 242
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL-LESDNGIPTPAFV-------- 371
+ M + G S + + G V +A + + + ++ + G+P P V
Sbjct: 243 ERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKG 302
Query: 372 -----------------------YKMEAYA-------KIGEFMKSLEIFREMQERLGSAS 401
+E+Y + G+ ++ + EM E +
Sbjct: 303 FCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPN 362
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
+ +Y+ +++ LC+ LM V G+ P +Y L + Y + G +
Sbjct: 363 IYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILN 422
Query: 462 ECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSS 520
E + K C PN L SL G +AEE+ M+ +++ ++T +CNI+++ +
Sbjct: 423 EMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMN-EKSYQLDTVTCNIVVNGLCRN 481
Query: 521 GDFVKAEKIYDLM 533
G+ KA ++ M
Sbjct: 482 GELEKASEVVSEM 494
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 145/372 (38%), Gaps = 74/372 (19%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ D + + R + D +++ G P +T+ L+ Y S +G + EA +I N MI
Sbjct: 369 VMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCS---KGKVFEAKAILNEMI 425
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ G + P N+L +L K G S +AE + + ++ D + I ++
Sbjct: 426 RKGCH-PNTYTCNTLLNSLW-KEGRKS-----EAEEMLQKMNEKSYQL--DTVTCNIVVN 476
Query: 306 SYQDNIDKERISLLKKEMQQAGFEE-GKE---------------------VLLSVLRVCA 343
N + E+ S + EM G GKE +++
Sbjct: 477 GLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLC 536
Query: 344 KEGDVEDAEKTWLRLLESD---NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
K G +E+A+K ++ ++ + + + FV + K G+ +L + ++M+ S
Sbjct: 537 KVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLN---FCKQGKISSALRVLKDMERNGCSK 593
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
++ Y+ +I L + LM E E G+ P + +Y N+ N
Sbjct: 594 TLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMIN--------------- 638
Query: 461 SECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSS 520
CL C G + A + + M + N S I++ A+ S
Sbjct: 639 --CL--CE---------------GGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKS 679
Query: 521 GDFVKAEKIYDL 532
GDF A +++D+
Sbjct: 680 GDFKVACELFDV 691
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 140/314 (44%), Gaps = 24/314 (7%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
+ +F++++NQG P+ +TF++LI +G + EA + MIQ G P +NS
Sbjct: 289 KRLFNEMVNQGVQPNVVTFNVLIDVLCK---EGKVIEAKDLLEVMIQ-RGIVPNLLTYNS 344
Query: 260 LFRA--LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
L LV L A +F ++ + G E D+ + ++ Y E
Sbjct: 345 LIEGFCLVGD--------LNSARELFVSMPSKGCE--PDVICYTVLINGYCKTSKVEEAM 394
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--ME 375
L M Q G + ++L + G V DA+K + + GIP ++Y +
Sbjct: 395 KLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVM--KVYGIPGDLYIYGIFLN 452
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
K G +++E+F +++ + ++ +I+ LCKA + E L ++ + ++P
Sbjct: 453 GLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQP 512
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEI 493
+ +Y + + + G + ++ F + +EK C P++ Y + + +EK E+
Sbjct: 513 DVVTYNIMIHEFCRGGQVVKANILFQK-MEKNGCTPDKITYATLIRGFFESKKLEKVVEL 571
Query: 494 FNHM-HSDQTIGVN 506
+ M D ++ VN
Sbjct: 572 LHMMVQRDVSLDVN 585
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 138/369 (37%), Gaps = 40/369 (10%)
Query: 176 YRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLD 235
Y D T L + E + +K +F + G P+ +T+ L +
Sbjct: 162 YIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTL------------MK 209
Query: 236 EACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYL----------QQAEFIFHN 285
C N I L +Q L++S + KP +S + +A +F
Sbjct: 210 GLCRTGNISIALKLHQEM--LNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEE 267
Query: 286 LLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKE 345
+ G+ Y+ L+W E L EM G + ++ V KE
Sbjct: 268 MKVQGMTPTVISYTSLMW----------EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKE 317
Query: 346 GDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVP 403
G V +A+ +++ GI Y +E + +G+ + E+F M + V
Sbjct: 318 GKVIEAKDLLEVMIQ--RGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVI 375
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY-INLTNMYLNLGMHDRLHLAFSE 462
Y +I CK + E L ++ G +P + +Y LT ++ + D L
Sbjct: 376 CYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVM 435
Query: 463 CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
+ + IYGI+L L G + +A E+FN + S I ++ N ++ +G
Sbjct: 436 KVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKS-YNIKLDIECFNCLIDGLCKAGK 494
Query: 523 FVKAEKIYD 531
A ++++
Sbjct: 495 LETAWELFE 503
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 13/150 (8%)
Query: 366 PTP---AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
PTP +F + + AKI + + ++ +M+ S + ++ LC
Sbjct: 92 PTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGL 151
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH---LAFSECLEK--CRPNRTIYGIY 477
++M + G +P + T + L M R+ L F+ ++K C PN YG
Sbjct: 152 AVMAGILRRGY---IPDIVTYTTLIKGLCMEHRISKAALLFTR-MQKLGCTPNAITYGTL 207
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTI-GVN 506
++ L GNI A ++ M +D ++ G+N
Sbjct: 208 MKGLCRTGNISIALKLHQEMLNDSSLYGIN 237
>gi|356574085|ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Glycine max]
Length = 733
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 126/302 (41%), Gaps = 12/302 (3%)
Query: 150 LAVHCMRIRENET-GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIIN 208
L ++++ N T + + W Q Y +FA LA + + +F + + + +
Sbjct: 133 LVAEVLKVQTNHTLASKFFHWAGSQRGYHHNFASYNALAYCLNRHHQFRAADQLPELMES 192
Query: 209 QGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKP 268
QG+ PSE F ILI + A +G +Y +M G +PR L+N + ALV
Sbjct: 193 QGKPPSEKQFEILIRMHSDAN-RGL--RVYHVYEKMRNKFGVKPRVFLYNRVMDALVRTG 249
Query: 269 GGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
+L A ++ +L GL + + L+ ID E + +L + M++
Sbjct: 250 ------HLDLALSVYDDLKEDGLVEESVTFMVLVKGLCKCGRID-EMLEVLGR-MRERLC 301
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
+ +++++ G+++ + W + A+ + AK G + E
Sbjct: 302 KPDVFAYTALVKILVPAGNLDACLRVWEEMKRDRVEPDVKAYATMIVGLAKGGRVQEGYE 361
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+FREM+ + Y ++E + EL L+K+ V +G + + YI L
Sbjct: 362 LFREMKGKGCLVDRVIYGALVEAFVAEGKVELAFDLLKDLVSSGYRADLGIYICLIEGLC 421
Query: 449 NL 450
NL
Sbjct: 422 NL 423
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 165/389 (42%), Gaps = 28/389 (7%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
+ RV+E M + A AT + + K + + ++F ++ +G + + +
Sbjct: 322 DACLRVWEEMKRDRVEPDVKAYATMIVG-LAKGGRVQEGYELFREMKGKGCLVDRVIYGA 380
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ A+++ +G ++ A + ++ GY+ ++ L L + L++ +Q+A
Sbjct: 381 LVEAFVA---EGKVELAFDLLKDLVS-SGYRADLGIYICLIEGLCN----LNR--VQKAY 430
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV--LLSV 338
+F + GLE D + L +Y + E L ++MQ+ GF ++ SV
Sbjct: 431 KLFQLTVREGLE--PDFLTVKPLLVAYAEANRMEEFCKLLEQMQKLGFPVIADLSKFFSV 488
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
L K+G + E T+ +L E + + + M++ KIGE K+L +F EM+ G
Sbjct: 489 L--VEKKGPIMALE-TFGQLKEKGH-VSVEIYNIFMDSLHKIGEVKKALSLFDEMK---G 541
Query: 399 SASVP-AYHKIIELLCKAEETELTESLM--KEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
+ P ++ +LC + E+ E+ +E P + +Y +LT +G D
Sbjct: 542 LSLKPDSFTYCTAILCLVDLGEIKEACACHNRIIEMSCIPSVAAYSSLTKGLCQIGEIDE 601
Query: 456 LHLAFSECLEKCR--PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
L +CL P Y + + + EK ++ N M N C+II
Sbjct: 602 AMLLVRDCLGNVSDGPLEFKYSLTIIHACKSNVAEKVIDVLNEMIEQGCSLDNVIYCSII 661
Query: 514 LSAYLSSGDFVKAEKIYDLMCLKKYEIES 542
S G +A K++ + + + ES
Sbjct: 662 -SGMCKHGTIEEARKVFSNLRERNFLTES 689
>gi|302781494|ref|XP_002972521.1| hypothetical protein SELMODRAFT_52385 [Selaginella moellendorffii]
gi|300159988|gb|EFJ26607.1| hypothetical protein SELMODRAFT_52385 [Selaginella moellendorffii]
Length = 450
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 128/294 (43%), Gaps = 21/294 (7%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ T+ +L+ A G +DEAC ++N M GG + + ++++ L L+ + G L
Sbjct: 38 PNAFTYTVLVRGLCDA---GRIDEACEVFNEMQGRGGIEAKTAIYSVLLNGLL-RSGKLD 93
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
F ++ ++ + YS +I+ S Q +D + + +EM
Sbjct: 94 D------AFSYYQMMQETCQPDSSTYSTMIYELSRQGRLD--HATKVAQEMVDKDKIPDM 145
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFR 391
L L + + G V DA K LR+++ + P Y + + + G ++L+ F
Sbjct: 146 PCLGVALEILCRCGRVSDAWK-LLRMMKEKHFKPDAVPHTYVLRKFCEAGRLDEALKGFE 204
Query: 392 EM--QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
EM E+ V Y I++ LC A+ + M++ V G P + ++ +L +
Sbjct: 205 EMTGNEKCEPDFV-TYSVIMDGLCSAQRLDDAWKFMEKMVAKGRMPDVRTFRSLVESHSK 263
Query: 450 LGM-HDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQT 502
+ DR L E ++ +P T+Y + L L G +A E++ + S T
Sbjct: 264 PRLVEDRGKL---EDGKRAKPTATMYTLLLYGLLRKGRAGEAMELYQQVLSGST 314
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 48/92 (52%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
K G +A++ + ++ D T + + +IG ++LE+FREM +R
Sbjct: 329 GKAGRGLEADEVFSDMIRGDVSPQTVTYNALISGLCRIGCVERALELFREMPQRECRPDS 388
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMK 434
+Y +++ +CKAE + +L++E E+G++
Sbjct: 389 ASYGALLDGICKAERADDAVTLLREASESGVE 420
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
+PN Y + + L +AG I++A E+FN M I T +++L+ L SG A
Sbjct: 37 KPNAFTYTVLVRGLCDAGRIDEACEVFNEMQGRGGIEAKTAIYSVLLNGLLRSGKLDDAF 96
Query: 528 KIYDLM 533
Y +M
Sbjct: 97 SYYQMM 102
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 153/355 (43%), Gaps = 18/355 (5%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + +++ F + + G P + F+ +I A + G LD+A I+ +
Sbjct: 381 TTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINA---SSESGNLDQAMKIFEK 437
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M + G +P S N+L + G + K L+++ + +L + +Q + + I
Sbjct: 438 MKE-SGCKPTASTFNTLIKGY----GKIGK--LEESSRLLDMMLRDEM-LQPNDRTCNIL 489
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL-RLLESD 362
+ ++ + E + +MQ G + ++ + A+ G AE + R+L +
Sbjct: 490 VQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK 549
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+ Y + G+ ++L F M+E ++ ++ +I+ + +
Sbjct: 550 VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVG 609
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESL 481
++ E G+KP + ++ L N + ++G R +++ LE P+ + I +
Sbjct: 610 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGY 669
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
AG EKAE+I N M + GV N I+S + S+G+ KA ++Y MC
Sbjct: 670 ARAGEPEKAEQILNQM---RKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMC 721
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 83/203 (40%), Gaps = 4/203 (1%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK---ME 375
KK+ + A FEE KE L+ + K+ + + + G + M
Sbjct: 291 FKKDYKPAVFEEKKEANLADVEAVFKDSEEGRVQLRSFPCVICSGGTTCGDVRSRTKLMN 350
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ G ++ IF + E S+ Y ++ L + + SL+ + + G+KP
Sbjct: 351 GLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKP 410
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ + N G D+ F + E C+P + + ++ G +E++ +
Sbjct: 411 DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL 470
Query: 495 NHMHSDQTIGVNTRSCNIILSAY 517
+ M D+ + N R+CNI++ A+
Sbjct: 471 DMMLRDEMLQPNDRTCNILVQAW 493
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 121/294 (41%), Gaps = 22/294 (7%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+I + E R+ + M++ + + L +RK + +I + + G P
Sbjct: 459 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 518
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+TF+ L AY + C+ + +I PR LHN + + V G + Y
Sbjct: 519 VTFNTLAKAYAR------IGSTCTAEDMII------PR-MLHNKV-KPNVRTCGTIVNGY 564
Query: 276 LQQAEF-----IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE 330
++ + F+ + G+ +++ LI + + D + + + M++ G +
Sbjct: 565 CEEGKMEEALRFFYRMKELGVHPNLFVFNSLI--KGFLNINDMDGVGEVVDLMEEFGVKP 622
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIF 390
+++ + GD++ E+ + +LE AF + YA+ GE K+ +I
Sbjct: 623 DVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQIL 682
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE-TGMKPLMPSYINL 443
+M++ +V Y +II C A E + + K+ G+ P + +Y L
Sbjct: 683 NQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETL 736
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 88/443 (19%), Positives = 161/443 (36%), Gaps = 73/443 (16%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
+ + ++W +Q Y+ D L D + K + ++ D+++ G P+ +TF I
Sbjct: 8 DLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKI 67
Query: 221 LI------------VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVS-- 266
LI + +L A + + I+N +I P LF + S
Sbjct: 68 LIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSR 127
Query: 267 -KP---------GGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER 315
KP GL K L++A + ++ G + DI + ++++
Sbjct: 128 VKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIRE 187
Query: 316 ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI----PTP--- 368
+++M+ AG ++ K+GDVE+A LE +G+ P P
Sbjct: 188 ACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEA-------LEILDGMKLAGPVPDVI 240
Query: 369 --------------------------------AFVYKMEAYAKIGEFMKSLEIFREMQER 396
F ++ + K G ++LE+ EM
Sbjct: 241 TYNSIIHALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 300
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
V Y ++ LC+ + ++ L++E V G P + +Y +L + G +
Sbjct: 301 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 360
Query: 457 HLAFSE-CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILS 515
H E + CR +Y + AGN+ KA EI M S + + NI+L
Sbjct: 361 HKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVP-PLFTYNIVLG 419
Query: 516 AYLSSGDFVKAEKIYDLMCLKKY 538
+ G KA + + + Y
Sbjct: 420 GLIKDGSISKAVSLISDLVARGY 442
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 159/417 (38%), Gaps = 52/417 (12%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
RIRE FR M+ D L + K+ + +I D + G VP
Sbjct: 184 RIRE-ACAFR---EKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDV 239
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY- 274
+T++ +I A V G + EA I M P N+L K G L +
Sbjct: 240 ITYNSIIHALC---VAGKVVEAAEILKTM----SCSPDLVTFNTLLDGF-CKAGMLPRAL 291
Query: 275 -YLQQ-------AEFIFHNLLTSGL----EIQKDIY-----------SGLIWLHSYQDNI 311
L++ + I + +L +GL ++Q Y +I S D +
Sbjct: 292 EVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGL 351
Query: 312 DK----ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
K E L KEM G G + S++ + G+V A + ++ S N +P
Sbjct: 352 CKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMV-SINMVP- 409
Query: 368 PAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
P F Y + K G K++ + ++ R V Y+ +I+ LCKA L
Sbjct: 410 PLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLA 469
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR----PNRTIYGIYLESL 481
E G P+ + L ++ L R+ A+S +E R PN +Y ++ L
Sbjct: 470 DEMASRG---CFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGL 526
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKY 538
+ ++ A + + M Q + ++ + ++ + G +A +YD M + +
Sbjct: 527 CKSDRMDDACMVLDAMRG-QGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGF 582
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 153/355 (43%), Gaps = 18/355 (5%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + +++ F + + G P + F+ +I A + G LD+A I+ +
Sbjct: 358 TTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINA---SSESGNLDQAMKIFEK 414
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M + G +P S N+L + G + K L+++ + +L + +Q + + I
Sbjct: 415 MKE-SGCKPTASTFNTLIKGY----GKIGK--LEESSRLLDMMLRDEM-LQPNDRTCNIL 466
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL-RLLESD 362
+ ++ + E + +MQ G + ++ + A+ G AE + R+L +
Sbjct: 467 VQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK 526
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+ Y + G+ ++L F M+E ++ ++ +I+ + +
Sbjct: 527 VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVG 586
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESL 481
++ E G+KP + ++ L N + ++G R +++ LE P+ + I +
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGY 646
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
AG EKAE+I N M + GV N I+S + S+G+ KA ++Y MC
Sbjct: 647 ARAGEPEKAEQILNQM---RKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMC 698
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 86/207 (41%), Gaps = 8/207 (3%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK---ME 375
KK+ + A FEE KE L+ + K+ + + + G + M
Sbjct: 268 FKKDYKPAVFEEKKEANLADVEAVFKDSEEGRVQLRSFPCVICSGGTTCGDVRSRTKLMN 327
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ G ++ IF + E S+ Y ++ L + + SL+ + + G+KP
Sbjct: 328 GLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKP 387
Query: 436 ---LMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
L + IN ++ NL ++ E C+P + + ++ G +E++
Sbjct: 388 DTILFNAIINASSESGNLDQAMKIFEKMKE--SGCKPTASTFNTLIKGYGKIGKLEESSR 445
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLS 519
+ + M D+ + N R+CNI++ A+ +
Sbjct: 446 LLDMMLRDEMLQPNDRTCNILVQAWCN 472
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 121/294 (41%), Gaps = 22/294 (7%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+I + E R+ + M++ + + L +RK + +I + + G P
Sbjct: 436 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+TF+ L AY + C+ + +I PR LHN + + V G + Y
Sbjct: 496 VTFNTLAKAYAR------IGSTCTAEDMII------PR-MLHNKV-KPNVRTCGTIVNGY 541
Query: 276 LQQAEF-----IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE 330
++ + F+ + G+ +++ LI + + D + + + M++ G +
Sbjct: 542 CEEGKMEEALRFFYRMKELGVHPNLFVFNSLI--KGFLNINDMDGVGEVVDLMEEFGVKP 599
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIF 390
+++ + GD++ E+ + +LE AF + YA+ GE K+ +I
Sbjct: 600 DVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQIL 659
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE-TGMKPLMPSYINL 443
+M++ +V Y +II C A E + + K+ G+ P + +Y L
Sbjct: 660 NQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETL 713
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 154/353 (43%), Gaps = 32/353 (9%)
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH--NSLFRALVSKPGGLSKYY 275
++ LI AY + G ++A ++++ MI+ G P P++ N + RAL+ G L + Y
Sbjct: 783 WNALIHAYAES---GLYEKARAVFDNMIKTG---PLPTVDSVNGMMRALIVD-GRLDELY 835
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+ + L +I K L+ L ++ D + + M+ AG+ +
Sbjct: 836 V-----VVGELQDMDFKISKSTV--LLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLY 888
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKSLEIFRE 392
S+ + D E L + E + P F + Y G F ++ ++++
Sbjct: 889 RSMTSLLCHHNRFRDVE---LMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQS 945
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
+ E Y+ +I + C++ E +L+ E + G+ P + SY +L +
Sbjct: 946 ILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAEL 1005
Query: 453 HDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
++ F E K + NR+IY + ++ +NAGN KAE + M D I + +
Sbjct: 1006 REQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKED-GIEPTIATMH 1064
Query: 512 IILSAYLSSGDFVKAEKIYDLMCLKKYEIES--------AWMEKLDYVLSLNR 556
I++++Y ++G +AE + + + E+ + A+++ DY L + +
Sbjct: 1065 ILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDAYLKNGDYDLGIKK 1117
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/361 (19%), Positives = 157/361 (43%), Gaps = 20/361 (5%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
D+ ++ G P +T++ LI A L++A +++ MI + RP L
Sbjct: 279 DLLFEVRQSGLRPDVITYNTLISA---CSQSSNLEDAVTVFEEMI---ASECRPDLWT-- 330
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
+ A+VS G K ++AE +F L+ G Y+ L++ + + N+DK +
Sbjct: 331 YNAMVSVHGRCGKA--EEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDK--VEHTC 386
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
+E+ +AGF++ + +++ + K G ++ A + + + +++ K+
Sbjct: 387 EELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKM 446
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
+ ++ ++ +M + ++ A+ +I K E + +G+KP +Y
Sbjct: 447 DKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAY 506
Query: 441 INLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+ + +++ G ++ L L + + RP+ +Y + L +L E+ EEI M
Sbjct: 507 LVMLDVFARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDMEL 566
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKY--EIESAWMEKLDYVLSLNRK 557
+ + S +I + +S G K+ CL+ Y + +S W YV++ +
Sbjct: 567 LCQMSLGVISTILIKARCVSQGG-----KLLKKACLQGYKPDAKSLWSIMNAYVMTEKHE 621
Query: 558 E 558
E
Sbjct: 622 E 622
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 117/293 (39%), Gaps = 40/293 (13%)
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
QQAE + L + I + I++ LI H+Y ++ E+ + M + G + +
Sbjct: 763 QQAEILVKGLRQAS-GIDRRIWNALI--HAYAESGLYEKARAVFDNMIKTGPLPTVDSVN 819
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
++R +G +++ L + D I + ++A+AK G+ + ++I+ M+
Sbjct: 820 GMMRALIVDGRLDELYVVVGELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAA 879
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
++ Y + LLC E ++ E G KP + + +L NMY G DR
Sbjct: 880 GYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRT 939
Query: 457 HLAFSECLEK----------------CR--------------------PNRTIYGIYLES 480
+ LE CR P Y L +
Sbjct: 940 TQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAA 999
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A E+A+++F M S ++ +N ++++ Y ++G+ KAE + +M
Sbjct: 1000 SAKAELREQADQLFEEMRS-KSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVM 1051
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 162/394 (41%), Gaps = 27/394 (6%)
Query: 128 GGTLVRILNAQKKWLRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATK 185
G L + ++ LR + TY L C + E V+E M+ R D
Sbjct: 275 GVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASEC-RPDLWTYNA 333
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ G+ K + +F +++ +G +P +T++ L+ A+ +G +D+ ++
Sbjct: 334 MVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAK---EGNVDKVEHTCEELV 390
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ G++ +N++ + K G L A ++ + G Y+ +I
Sbjct: 391 K-AGFKKNEITYNTMIH-MYGKMG-----RLDLAVGLYDEMRAVGCTPDAVTYTVMIDSL 443
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
D I + L ++M AG + +++ AK G DAEKT+ ++ S
Sbjct: 444 GKMDKIAEAGKVL--EDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKP 501
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
A++ ++ +A+ GE K L ++R M Y ++ L K ++ E E ++
Sbjct: 502 DRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEII 561
Query: 426 KEF-VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNR----TIYGIYLES 480
++ + M + S I + ++ G L CL+ +P+ +I Y+ +
Sbjct: 562 QDMELLCQMSLGVISTILIKARCVSQGG----KLLKKACLQGYKPDAKSLWSIMNAYVMT 617
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
K+ + E I +H+ S Q + C+IIL
Sbjct: 618 EKHEEGLSLLECIRDHVSSSQDL---ISECSIIL 648
Score = 39.3 bits (90), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 97/236 (41%), Gaps = 19/236 (8%)
Query: 164 FRVYEWM---MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
FR E M M+ ++ D ++ L + F + ++ I+ G P E T++
Sbjct: 901 FRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNT 960
Query: 221 LIVAYLSA--PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQ 278
LIV Y + P +E ++ N M + G P+ + SL A S L +Q
Sbjct: 961 LIVMYCRSLRP-----EEGFTLLNEMGK-RGLTPKLQSYKSLLAA--SAKAELR----EQ 1008
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
A+ +F + + ++ + IY + + Y++ + + L M++ G E + +
Sbjct: 1009 ADQLFEEMRSKSYQLNRSIYH--MMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHIL 1066
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
+ G +AE L S + T + +AY K G++ ++ EM+
Sbjct: 1067 MTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDAYLKNGDYDLGIKKLLEMK 1122
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 117/264 (44%), Gaps = 14/264 (5%)
Query: 270 GLSKYYLQQAEF-IFHNLLTSG-LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
GL K A F +F ++ +G Y+ L+ QD +D R + E ++
Sbjct: 105 GLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVI--TEARKRD 162
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT-PAFVYKMEAYAKIGEFMKS 386
F +++ + G V++A T+ ++ E + +PT +F + + +
Sbjct: 163 FAPDVVTYNTLMAALFQLGRVDEALATFTQMTE-EGYVPTLVSFNAIITGLCRARRLADA 221
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNM 446
LE+F EM +R ++ Y +I+ LCK+++ + + L+ V G +P + +Y L
Sbjct: 222 LEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLG 281
Query: 447 YLNLGMHDR-LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV 505
+ G D L L + C P+ Y + ++ L G ++ A EIF + +++
Sbjct: 282 FSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKC--- 338
Query: 506 NTRSCNIILSAYLSSGDFVKAEKI 529
S N++ + L G + +A ++
Sbjct: 339 ---SPNVVTYSALIGG-YCRASRV 358
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 117/310 (37%), Gaps = 26/310 (8%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
+ F ++ M+ R + L D + K+ + R + + + P +T++
Sbjct: 113 DAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNT 172
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ A G +DEA + + +M + GY P N++ L L A
Sbjct: 173 LMAALFQL---GRVDEALATFTQMTE-EGYVPTLVSFNAIITGLCRA------RRLADAL 222
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+F+ ++ YS +I D +D+ + LL + + + + V + L
Sbjct: 223 EVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQ-QLLDRMVSEGCRPD--LVAYTPLV 279
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
+ D+ LR + S IP + ++ K+G + EIFRE+ S
Sbjct: 280 LGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCS 339
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
+V Y +I C+A + +M+E P+ + M L M DR A
Sbjct: 340 PNVVTYSALIGGYCRASRVDEGGKVMREMA------CRPNVVTYNTMIWGLSMVDRNEEA 393
Query: 460 F------SEC 463
+ SEC
Sbjct: 394 YGMFREMSEC 403
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 126/321 (39%), Gaps = 15/321 (4%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D+ T L G+ K + +++F ++I++G P E+T+ LI Y A G + A
Sbjct: 397 DYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKA---GEMVNAF 453
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDI 297
S++N M+Q+G P + +L GL K+ L A + + GL++ I
Sbjct: 454 SLHNEMVQMG-MTPNIVTYGALI-------DGLCKHGELDTANELLDEMRKKGLQLNVCI 505
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
Y+ ++ NI E+ L KEM+ AG + +V+ + GD++ A K
Sbjct: 506 YNSMVNGICKAGNI--EQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQE 563
Query: 358 LLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
+L+ F M + +G + M E+ Y+ +++ C
Sbjct: 564 MLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS 623
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-PNRTIYGI 476
T + K G+ P +Y L + + E +EK P T Y
Sbjct: 624 MNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNA 683
Query: 477 YLESLKNAGNIEKAEEIFNHM 497
++ +A E+F M
Sbjct: 684 LIKRFYKKRKFXEARELFEEM 704
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 121/283 (42%), Gaps = 12/283 (4%)
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P P + F+ LV +L +A + LL+ GL + D S +L +N
Sbjct: 188 PNPIAFDIFFQVLVEIG------HLSEARKLLDKLLSYGLVVTVD--SCNAFLSRIANN- 238
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
E I + K + G ++ + G V++A + +++ + ++
Sbjct: 239 -SEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYS 297
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
++ Y +GE K+L++ +MQ + + Y+ II LLCK ++ E +++E +
Sbjct: 298 TVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ 357
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKA 490
+ P Y L + + LG + F E L +K P+ Y ++ G + +
Sbjct: 358 KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417
Query: 491 EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ +F+ M S + + + + ++ Y +G+ V A +++ M
Sbjct: 418 QNLFHEMIS-RGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEM 459
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 110/260 (42%), Gaps = 14/260 (5%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWL-HSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
L++A + ++ GL+ + Y+ +I L + + E++ +EM V
Sbjct: 309 LKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVL---REMMSQKIIPDNVV 365
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
+++ K G V A K + +L + ++ + + G+ ++ +F EM
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
R Y +I++ CKA E SL E V+ GM P + +Y L + L H
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALID---GLCKHG 482
Query: 455 RLHLAFSECLEKCRP-----NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
L A +E L++ R N IY + + AGNIE+A ++ M I + +
Sbjct: 483 ELDTA-NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV-AGIDPDAIT 540
Query: 510 CNIILSAYLSSGDFVKAEKI 529
++ AY GD KA K+
Sbjct: 541 YTTVIDAYCRLGDIDKAHKL 560
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 88/213 (41%), Gaps = 2/213 (0%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
EM G + + +++ V K G++ +A +++ + ++ K G
Sbjct: 423 EMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHG 482
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
E + E+ EM+++ +V Y+ ++ +CKA E LMKE G+ P +Y
Sbjct: 483 ELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYT 542
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
+ + Y LG D+ H E L++ +P + + + G +E + + M +
Sbjct: 543 TVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM-LE 601
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ I + + N ++ + KIY M
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRM 634
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/337 (19%), Positives = 147/337 (43%), Gaps = 20/337 (5%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSL--HNSLFRALVS-KPGGLSKYYLQQAEFIFHNLLTSG 290
+D+A +++N +I + QP PS+ N++ ++V K ++ L+Q F
Sbjct: 65 IDDAVTLFNHLINM---QPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVF--------- 112
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ I++ IW++ Y + + + + G++ L +V++ G+V+
Sbjct: 113 KGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQK 172
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
A + + + + KIG + + ++ +EM+ ++ ++ Y+ II+
Sbjct: 173 AMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIID 232
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRP 469
CK E T L + V+ G+ P + +Y +L + G + E + K P
Sbjct: 233 SFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINP 292
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHM-HSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
N + + +++ G + +A+ +FN M Q + T N ++S + G+ ++A K
Sbjct: 293 NVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTF--NTLISGHCLHGNVLEARK 350
Query: 529 IYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSL 565
++D + ++ + W + + K + + VSL
Sbjct: 351 LFDTV-FERGILPDVWSYTILIIGYCKCKRIDEAVSL 386
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/354 (18%), Positives = 141/354 (39%), Gaps = 16/354 (4%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ + + + + D K+ K RD++ I++ G P +T+ LI +
Sbjct: 215 MEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQ 274
Query: 231 QGCLDE-ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
G + + C + N+ I P N L A K + +A+ +F+ ++
Sbjct: 275 WGEVKQLMCEMVNKNIN-----PNVYTFNVLIDAFCRKGK------MIEAQGMFNLMVKR 323
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
G + ++ LI H N+ + R L ++ + + ++ C K ++
Sbjct: 324 GQQPDIVTFNTLISGHCLHGNVLEAR-KLFDTVFERGILPDVWSYTILIIGYC-KCKRID 381
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
+A + + + + + ++ K G + E+F + +V Y+ +I
Sbjct: 382 EAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILI 441
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL-NLGMHDRLHLAFSECLEKCR 468
+ CK ++ ++ L K G+ P + +Y L N Y + + + ++L +
Sbjct: 442 DAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLA 501
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
P+ Y + L +G I A E+F MH V+ + N++L A+ + D
Sbjct: 502 PDSITYNSLFDGLCKSGRISDAWELFKVMHVGGP-PVDVATYNVLLDAFCKAQD 554
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 139/351 (39%), Gaps = 46/351 (13%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L D K + + D++++QG VP+ +T+ +++ D+ S+ R
Sbjct: 343 TSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMER 402
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
G + L+ +L G ++A + + + G+E+ +Y LIW
Sbjct: 403 ----AGVKANELLYTTLIH------GHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIW 452
Query: 304 LHSYQDNIDKERISLLKK--------------EMQQAGFEEGKE----VLL--------- 336
+D+ + SLL K + A F+ GKE LL
Sbjct: 453 GLCKVQKLDEAK-SLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQ 511
Query: 337 -SVLRVCA------KEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEI 389
+V+ CA K G + +A + ++ E + ++ + KIG K++ +
Sbjct: 512 PNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHL 571
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
EM ++ S Y +I+ K + + +L + +ETG++ + Y + + N
Sbjct: 572 MNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCN 631
Query: 450 LGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+ M SE + P++T Y + + GN+E+A + N M S
Sbjct: 632 MNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 106/499 (21%), Positives = 197/499 (39%), Gaps = 74/499 (14%)
Query: 93 HLGEPVVEVIELEELPEQWRRAKLAWLCKELPS--HKGGTL---VRILNAQKKWLRQEDG 147
HL +V+++ L R+ L + L S G L VR L A+ + LR
Sbjct: 109 HLAASLVDILHRAALALGPHRSALPSVFDTLLSLLADHGLLDDAVRAL-ARVRQLRVPPN 167
Query: 148 TYLAVHCM-RIRENETGF---RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIF 203
T H + R+ N G R++E + + + F+ + D++ K+ + + R +F
Sbjct: 168 TRTCNHILLRLARNRQGGLVRRLFEHLPAPNVFTFNIVI-----DFLCKQGELVEARALF 222
Query: 204 DDIINQGRVPSEMTFHILIVAY-----------LSAPVQ--GC----------------- 233
+ G P +T++ LI Y L + ++ GC
Sbjct: 223 VRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKF 282
Query: 234 --LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGL 291
+++A S + M +LG +L S F K G +++A +F + G+
Sbjct: 283 GWIEKAYSYFGEMKRLGVMANVVTL--STFVDAFCKEG-----LVREAMKLFAQMRVRGM 335
Query: 292 EIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
+ Y+ L+ +D + I LL + + Q + V +C KEG V A
Sbjct: 336 MPNEFTYTSLVDGTCKAGRLD-DAIVLLDEMVHQGLVPNVVTYTVMVDGLC-KEGKVAVA 393
Query: 352 EKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFM-----KSLEIFREMQERLGSASVPAYH 406
+ L L+E G+ +Y + G FM ++L++ EM+ + V Y
Sbjct: 394 DDV-LSLMER-AGVKANELLYTTLIH---GHFMNKNSERALDLLNEMKNKGMELDVSLYG 448
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR----LHLAFSE 462
+I LCK ++ + +SL+ + + G++P Y + + + G LH
Sbjct: 449 TLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDS 508
Query: 463 CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
L+ PN Y ++ L AG+I +A F+ M + + N + ++ + G
Sbjct: 509 GLQ---PNVVTYCALIDGLCKAGSIYEAISHFDKMR-ELGLDPNVQVYTTLIDGFCKIGS 564
Query: 523 FVKAEKIYDLMCLKKYEIE 541
KA + + M K ++
Sbjct: 565 LSKAVHLMNEMVDKGMSLD 583
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 16/243 (6%)
Query: 194 RKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPR 253
RK + + + +G PS +TF++L+ Y A G + A N+M ++ GYQP
Sbjct: 157 RKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKA---GKMSNALHFSNQM-RMAGYQPS 212
Query: 254 PSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
+N+L G + +A F ++ GL K Y+ LI + ++++DK
Sbjct: 213 AVTYNALI------AGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDK 266
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
+ M++AG E ++ EG+++DA K + + E G+ +Y
Sbjct: 267 A--FEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGE--KGLQVGNVIYD 322
Query: 374 M--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
M Y + G K++++ EM+++ + +Y I +LC + E+L+ + V
Sbjct: 323 MLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRA 382
Query: 432 GMK 434
G++
Sbjct: 383 GVQ 385
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 73/369 (19%), Positives = 140/369 (37%), Gaps = 53/369 (14%)
Query: 178 FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEA 237
D A T L + A+ + +FD + G P+E+TF LI Y + G ++
Sbjct: 36 LDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYF---IHGRREKG 92
Query: 238 CSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI 297
+++ +M ++GG +P +N L + + EF
Sbjct: 93 LALFEKM-RIGGIEPNLYTYNILV-----------GEWCRTGEF---------------- 124
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
ER LL +EM G +++ + ++DA + L
Sbjct: 125 ----------------ERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQ-LLE 167
Query: 358 LLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
L+ + P+ F ++ Y K G+ +L +M+ S Y+ +I C+A
Sbjct: 168 LMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRAR 227
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIY 474
+ + E G+ P +Y L + + D+ F+ +EK + Y
Sbjct: 228 DMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAG-MEKAGLEVDVRTY 286
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
G+ + +L GN++ A ++F + ++ + V ++++ Y G KA K+ M
Sbjct: 287 GVLVHALCMEGNMKDARKLFQSI-GEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMR 345
Query: 535 LKKYEIESA 543
K + SA
Sbjct: 346 KKGFVPNSA 354
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 85/186 (45%), Gaps = 4/186 (2%)
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
+ GEF ++ +F EM + + +V +Y+ +I LC+ + + L++ G++P +
Sbjct: 120 RTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVV 179
Query: 439 SYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
++ L + Y G M + LH + + +P+ Y + A ++ +A F+ M
Sbjct: 180 TFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDM 239
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSL--N 555
++ + + I++ A+ D KA +++ M E++ L + L + N
Sbjct: 240 K-ERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGN 298
Query: 556 RKEVKK 561
K+ +K
Sbjct: 299 MKDARK 304
>gi|302794911|ref|XP_002979219.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
gi|300152987|gb|EFJ19627.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
Length = 1143
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 145/351 (41%), Gaps = 23/351 (6%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
+YE MM + T L ++ K + A +++D++ + S + + ++I Y
Sbjct: 333 MYEAMMSRGIVPSSVTYTTMLI-HLNKAERLADAALLWEDLVEESVELSPLAYALMITIY 391
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHN 285
G +EA ++ M+ GY P ++N + L G L +Y +A +F
Sbjct: 392 RKL---GRFEEALEVFEAMLG-AGYYPDSLIYNMVLHML----GKLGRY--DEAVDVFTA 441
Query: 286 LLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKE 345
+ L K Y+ ++ + D E + + +MQ + V SV+ + K
Sbjct: 442 MQRQELCTSKYSYATMLHICEKADKF--ELAASIFSDMQMKRCPVDEVVYTSVISIYGKA 499
Query: 346 GDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
G ++AEK + + E + F K G++ +++++ E+ + + A+
Sbjct: 500 GLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDTAW 559
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE 465
++ KA E K VE+G+ LM +Y ++ ++Y M + L F +
Sbjct: 560 KTLLHCYVKAGNVERATKTFKTLVESGIADLM-AYNDMLSLYAEFDMLEDAKLLFQQLKS 618
Query: 466 KC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHM--------HSDQTIGVNT 507
+P++ +G ++ NA + AEE+ M H Q I +N
Sbjct: 619 SSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKGFTPDHITQGILINA 669
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 10/225 (4%)
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
E+ + L ++M+Q G + ++ +L +K G VEDA+ L + +GIP Y
Sbjct: 809 EKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLVEDADA--LIHMARGDGIPLDIVAYN 866
Query: 374 --MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
++A + G K+++ + + S+ Y +I + K+ T E + K+
Sbjct: 867 TIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSA 926
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKA 490
G +P Y + N Y GM++ F L RP+ Y +++ AG KA
Sbjct: 927 GFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKA 986
Query: 491 EEIFNHMHSDQTIGVNTRSCNIIL--SAYLSSGDFVKAEKIYDLM 533
E++ M G S +L SAY G +AE + M
Sbjct: 987 EQLLVEM---AKAGCPPSSVTFLLLISAYAHRGKCNEAENALERM 1028
>gi|357494871|ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519059|gb|AET00683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 861
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 148/362 (40%), Gaps = 33/362 (9%)
Query: 249 GYQPRPSLHNSLFRALVSKPG-GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
G++P S N+LF ALV +K L+ +F+ N D G + L
Sbjct: 92 GFKPDQSSCNALFDALVDAGAVKAAKSLLEYPDFVPKN----------DSLEGYVRLLG- 140
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG--I 365
+N E + + +++ GF L C K G + K + ++ES G I
Sbjct: 141 -ENGMVEEVFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNI 199
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
++A+ + E+ R++ E+ ++ +I CK ++ + ++
Sbjct: 200 DVETVGCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEIL 259
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-PNRTIYGIYLESLKNA 484
+ P + +Y + N L +D F++ ++ P+R +Y ++ +
Sbjct: 260 HIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDM 319
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE----- 539
G + +A +++ M + N + N+++ Y DF +A K+YD MC + Y
Sbjct: 320 GLLAEARKLWFEMIQKGLVP-NEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVS 378
Query: 540 ----IESAWME-KLDYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRH 594
I ++ K D LSL + +K ++ +L S L+ GLC E + + +
Sbjct: 379 YSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNS------LIKGLCQEGELAKATN 432
Query: 595 MI 596
++
Sbjct: 433 LL 434
>gi|225430810|ref|XP_002271426.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Vitis vinifera]
Length = 414
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 120/309 (38%), Gaps = 51/309 (16%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
+ K R+FA + + N ++ E LI +Y + G A +N+M +LG
Sbjct: 81 LAKSRRFADIETLIESHKNDPKITQEPYLSTLIRSY---GIAGMFQHALRTFNQMEELG- 136
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY-Q 308
PR S+ F AL+S SK + Q +F G+ K Y I + SY +
Sbjct: 137 -TPRSSIS---FNALLS-ACNQSKLFDQVPKFFEEIPRRYGVLPDKISYG--ILVKSYCE 189
Query: 309 DNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
+ + IS+LK EM++ G E ++L K+G + AEK W
Sbjct: 190 SGLSDKAISMLK-EMEEKGVEITAVTFTTILDALYKQGQSDRAEKVW------------- 235
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
EM ++ G V AY+ I + + E ++L+ E
Sbjct: 236 ----------------------HEMAKK-GCLDVGAYNVKI-MFAHGGDPENVKALIDEM 271
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNI 487
G+KP SY L Y GM D ++E E C PN + + L +G+
Sbjct: 272 SNAGLKPDTISYNYLMTSYCKSGMVDEAKKVYAELEETGCHPNAATFRTLIYYLCRSGDF 331
Query: 488 EKAEEIFNH 496
E ++F
Sbjct: 332 ETGYKVFKQ 340
>gi|357127701|ref|XP_003565517.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Brachypodium distachyon]
Length = 579
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 148/355 (41%), Gaps = 38/355 (10%)
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL-GGYQ 251
+R F + + DI G P + F+ LI A++ A G + EA S++ +M + G +
Sbjct: 74 QRAFERIPALLADIEAAGLRPDPIFFNALINAFVEA---GRMGEATSVFWKMSRHHPGCR 130
Query: 252 PRPSLHNSLFRA--LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
P S N+L + + +P ++++ IF +L+T+ + Y+ I + ++ D
Sbjct: 131 PTVSTFNTLIKGFGIAGRP--------EESQRIF-DLMTAWVRPNLTTYN--ILVKAWCD 179
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE--------KTWLRLLES 361
E+ + M+ A E ++ AK + AE + LR E
Sbjct: 180 QRRMEQAWAVVGRMRPAAVEPDVVTYNTLASAYAKNDETWRAEELVVVEMARARLRTSER 239
Query: 362 DNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
GI + Y + G ++L R+M++ +V ++ +++ A +
Sbjct: 240 TWGI-------IVGGYCREGRLEEALRCVRQMKDAGVGPNVIVFNTLLKGFLDANDAAAA 292
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLES 480
++ + G+KP + +Y + N +LG R F LE P+ +Y I +
Sbjct: 293 ADVLGLMEQFGIKPDIVTYSHQLNALSSLGHMARCAKVFDRMLEAGIEPDPQVYSILAKG 352
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A KAEE+ M +GV N + ++S + S D A ++YD M
Sbjct: 353 YVRAQQPGKAEELLQQMGR---LGVRPNVVTFTTVISGWCSVADMDNATRVYDKM 404
>gi|326530248|dbj|BAJ97550.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 136/320 (42%), Gaps = 25/320 (7%)
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL 271
+PS T+ IL + G LD A + + M++ G P P ++ + V+ G
Sbjct: 198 LPSPTTYRILARSLAE---NGKLDLALELKDGMLERGLIAPDPQVYAFVMGGFVNAGDGD 254
Query: 272 SKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEG 331
+ L + L GL + +Y L+ + + ++KE + + + EG
Sbjct: 255 TAVSLYEE---LKEKLGGGLILDGVVYGNLMKGY-FLKGMEKEAMDCYTEVLG-----EG 305
Query: 332 KEVLLS------VLRVCAKEGDVEDAEKTWLRLLESDN-----GIPTPAFVYKMEAYAKI 380
+V VL + G ++DA + + R+ + + + +F ++AY +
Sbjct: 306 SKVRFGAVSYNMVLDALGRNGRLDDAVELFDRMCKEHDPPRRIAVNLGSFNVMVDAYCGV 365
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
F ++E+F +M E+ + +Y+ +I L K + E L KE E G+ P +Y
Sbjct: 366 ERFQDAIEVFGKMGEKSCTPDALSYNSLINWLGKNKLVGEAEELYKEMGERGINPDEYTY 425
Query: 441 INLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+ L + D FS+ + RPN + + L I++A+ F+ M +
Sbjct: 426 VLLIESCFRVDNVDDAVGYFSKMFDVGLRPNANAFNKVISGLVKVDRIDEAQGFFDLM-T 484
Query: 500 DQTIGVNTRSCNIILSAYLS 519
++ + N SC +L AY++
Sbjct: 485 EKEVKPNIASCESLLRAYIN 504
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 151/347 (43%), Gaps = 36/347 (10%)
Query: 205 DIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL 264
+++ Q P+ +T++ +I + + +G + A + M + GG P + +L
Sbjct: 137 ELLRQMPRPNAVTYNTVIAGFCA---RGRVQAALEVMREMRERGGIAPDKYTYATLIS-- 191
Query: 265 VSKPGGLSKYYLQQAEFIFHNLLTSG-LEIQKDIYSGLIWLHSYQDNIDKERISL-LKKE 322
G ++ A +F +LT G + +Y+ LI Y D + K ++L +++
Sbjct: 192 ----GWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIG--GYCD-VGKLDVALQYRED 244
Query: 323 MQQAGFE---EGKEVLLSVLRVCAKEGD----VEDAEKTWLRLLESDNGIPTPAFVYKM- 374
M Q G +L+ L + A+ D +E+ +K NG F Y +
Sbjct: 245 MVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQK---------NGFSPDVFTYNIL 295
Query: 375 -EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
Y K G K+LE+F EM ++ A+ Y +I + + + + T+ L V+ G+
Sbjct: 296 INGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGI 355
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGIYLESLKNAGNIEKAE 491
+P + Y L N + G +R + +E +EK R P+ Y + G +++A
Sbjct: 356 RPDVVMYNALINSHCTGGDMERAYEIMAE-MEKKRIPPDDMTYNTLMRGFCLLGRLDEAR 414
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKY 538
+ + M + + I + S N ++S Y GD A ++ D M K +
Sbjct: 415 TLIDEM-TKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGF 460
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 109/244 (44%), Gaps = 16/244 (6%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ +++ G P T++ILI Y +G +A ++ M Q G + + SL
Sbjct: 276 VLEEMQKNGFSPDVFTYNILINGYCK---EGNEKKALEVFEEMSQ-KGVRATAVTYTSLI 331
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
S+ G +Q+ + +F+ + G+ +Y+ LI +S+ D ER +
Sbjct: 332 YVF-SRKG-----QVQETDRLFNVAVKKGIRPDVVMYNALI--NSHCTGGDMERAYEIMA 383
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAK 379
EM++ +++R G +++A + + GI Y + Y+
Sbjct: 384 EMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEM--TKRGIQPDLVSYNTLISGYSM 441
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
G+ +L + EM ++ + ++ Y+ +I+ LCK + + E+LMKE V G+ P +
Sbjct: 442 KGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDST 501
Query: 440 YINL 443
YI+L
Sbjct: 502 YISL 505
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 122/312 (39%), Gaps = 29/312 (9%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
PS TF I+ Y SA G D+A ++ M + G +Q S N++ L
Sbjct: 124 PSPKTFAIVAERYASA---GKPDKAVKLFLNMHEHGCFQDLASF-NTILDVLCKSKRVEK 179
Query: 273 KYYLQQA-------EFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
Y L +A + + +N++ +G + K L L KEM +
Sbjct: 180 AYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVL----------------KEMVE 223
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMK 385
G ++L+ + G + A + +L + + D I + + + GE +
Sbjct: 224 RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKR 283
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+ +F EM SV Y+ +I++LCK + E + +E V G +P + +Y L
Sbjct: 284 ARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIR 343
Query: 446 MYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
+ G R E C PN Y + + +EKA +F M S +
Sbjct: 344 GLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLP 403
Query: 505 VNTRSCNIILSA 516
N + NI++S
Sbjct: 404 -NLDTYNILISG 414
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 88/426 (20%), Positives = 184/426 (43%), Gaps = 47/426 (11%)
Query: 82 FDVGTAGSEMRHLGEPVVEVIELEELPEQWRRAKLAW----LCK----ELPSHKGGTLVR 133
F+ T E H EP +E+I+L + R+ LAW L K E+P LVR
Sbjct: 133 FNWATNLEEFGHSPEPYMEMIDLAG---KVRQFDLAWQLIDLMKTRNVEIPVETFTILVR 189
Query: 134 ILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKE 193
K L E AVH R+ ++ + F +++ + K+
Sbjct: 190 --RYVKAGLAAE-----AVHAFN--------RMEDYGCKPDKIAFSVVISS-----LSKK 229
Query: 194 RKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPR 253
R+ + + FD + ++ P + + L+ + A G + EA ++ M ++ G QP
Sbjct: 230 RRAIEAQSFFDSLKDRFE-PDVVVYTSLVHGWCRA---GNISEAERVFGEM-KMAGIQPN 284
Query: 254 PSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
++ + AL + G +++ A +F ++ G + ++ L+ +H
Sbjct: 285 VYTYSIVIDALC-RSGQITR-----AHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRT-- 336
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
E++ + +M++ G ++ ++ ++E+A K L ++ + +F
Sbjct: 337 EKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKI-LNSVKKGCNLNASSFNPI 395
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+K+G+ + +F +M++ + Y+ ++ + + T++ L KE E +
Sbjct: 396 FGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEI 455
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KC-RPNRTIYGIYLESLKNAGNIEKAE 491
+P +Y L + + +G + + F E +E KC RP+ +Y + L+ L+ AG ++K E
Sbjct: 456 EPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHE 515
Query: 492 EIFNHM 497
E+ M
Sbjct: 516 ELVEKM 521
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 144/360 (40%), Gaps = 26/360 (7%)
Query: 185 KLADYMGKERKFAKCRDIFDDIINQG-RVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
++ D GK R+F + D + + +P E TF IL+ Y+ A G EA +NR
Sbjct: 151 EMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVE-TFTILVRRYVKA---GLAAEAVHAFNR 206
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M G + + F ++S LSK F + L E +Y+ L+
Sbjct: 207 MEDYGCKPDKIA-----FSVVIS---SLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVH 258
Query: 304 LHSYQDNI-DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
NI + ER+ EM+ AG + V+ + G + A + +++
Sbjct: 259 GWCRAGNISEAERVF---GEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVG 315
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA-SVPAYHKIIELLCKAEETELT 421
F M + K G K L+++ +M+ RLG Y+ +IE C+ + E
Sbjct: 316 CDPNAITFNNLMRVHVKAGRTEKVLQVYNQMK-RLGCPPDAITYNFLIESHCRDDNLEEA 374
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLES 480
++ V+ G S+ + LG + H F++ + KCRPN Y I +
Sbjct: 375 VKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRM 433
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM----CLK 536
+ + + ++ M ++ I N + +++S + G + A + M CL+
Sbjct: 434 FADKKSTDMVLKLRKEMDENE-IEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLR 492
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 93/216 (43%), Gaps = 3/216 (1%)
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
K+M + GF S++ K G+V+DA K ++ + ++ K
Sbjct: 238 KKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKS 297
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
+F+++ E+ EM+ R + Y +I LCKA++ E E +++ +G P + Y
Sbjct: 298 QKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 357
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
++ + + G E + K R P+ Y ++ L G I +A+ I M
Sbjct: 358 SSIIHAFCKSGKLLEAQKTLQE-MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQ 416
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
+ + + + +++ S V+A+K+ D MC
Sbjct: 417 ESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMC 452
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 106/243 (43%), Gaps = 12/243 (4%)
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
NSL + LV K + + + LL S + D+ S I + + + D
Sbjct: 81 NSLLQVLVR-----CKKHREAGDLFRSELLAS---CEPDVCSYNIVISGFCNAGDLHAAL 132
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
L +EM+ AGF ++ A GD+ D LR + D + T + + A+
Sbjct: 133 ELLEEMKSAGFAPDAFTHTPIITAMANAGDL-DGAMDHLRSMGCDPNVVT--YTALIAAF 189
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
A+ + +++++ EM+ER ++ Y+ +++ LCK + ++K+ +E G P +
Sbjct: 190 ARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNV 249
Query: 438 PSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
++ +L + + G + D L + RPN Y ++ L + +A+E+
Sbjct: 250 MTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEE 309
Query: 497 MHS 499
M +
Sbjct: 310 MKT 312
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 144/357 (40%), Gaps = 38/357 (10%)
Query: 158 RENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMT 217
R N R +M R + + L D + K +KF + +++ +++ +G P T
Sbjct: 262 RGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFT 321
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL--SKYY 275
+ LI A ++EA + RM G P +++S+ A K G L ++
Sbjct: 322 YSALIHGLCKADK---IEEAEQMLRRMAG-SGCTPDVVVYSSIIHAFC-KSGKLLEAQKT 376
Query: 276 LQQ-------AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
LQ+ + + +N + GL I + L Q++ D +L + +
Sbjct: 377 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGD-----VLPDVVTYSTV 431
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
G +C + VE A+K R+ ++ + ++ K G ++
Sbjct: 432 ING---------LCKSDMLVE-AQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEY 481
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+ + M+ + +V Y +I LCKA + + E +M+E G P + +Y + N
Sbjct: 482 LLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVN--- 538
Query: 449 NLGMHDRLHLA------FSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
L + R+ A + +C P+ Y + +L ++ +++AE++ M S
Sbjct: 539 GLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 121/292 (41%), Gaps = 14/292 (4%)
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
G P +N L RAL ++ L++A + ++ +G Y+ L+
Sbjct: 147 GVAPNVYTYNILVRALCARG------RLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRA 200
Query: 309 DNID-KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+D ER+ L +E A + S++ K G +E A K + ++
Sbjct: 201 GELDGAERVVSLMREEGNA--KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDV 258
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
++ + Y K+G +SL +F EM +R V + +I CKA E +L+ +
Sbjct: 259 VSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLESLKNAG 485
E G++ ++ L + + G D LA E + KC +P+ Y + G
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEE-MRKCGIQPSVVCYNALINGYCKLG 377
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
++ A E+ M + + + + + + I+S Y G+ A ++ M LKK
Sbjct: 378 RMDLARELIREMEAKR-VKPDVVTYSTIISGYCKVGNLDSAFQLNQKM-LKK 427
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 138/356 (38%), Gaps = 59/356 (16%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
T +A C R E + RV M ++ + + + + + K + R +FD+++
Sbjct: 192 TLVAAFC-RAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV 250
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
+G P ++++ L+ Y GCL E+ ++++ M Q G P SL A K
Sbjct: 251 REGLAPDVVSYNTLLSGYCKV---GCLHESLAVFSEMTQRG-LVPDVVTFTSLIHA-TCK 305
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
G L +QA + + GL + + ++ LI D K+ G
Sbjct: 306 AGNL-----EQAVALVAQMRERGLRMNEVTFTALI------DGFCKK------------G 342
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMK 385
F + + + +R C GI Y + Y K+G
Sbjct: 343 FLDDALLAVEEMRKC---------------------GIQPSVVCYNALINGYCKLGRMDL 381
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+ E+ REM+ + V Y II CK + L ++ ++ G ++P I ++
Sbjct: 382 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG---VLPDAITYSS 438
Query: 446 MYLNLGMHDRLHLA---FSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ L RL+ A F L+ +P+ Y ++ GN+EKA + + M
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
++E M+Q +F T L D KE K + D++I +G +P +T+ +LI
Sbjct: 455 LFENMLQLGVQPDEFTYTT-LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLING- 512
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRP----------SLHNSLFRALVSKPGGLS-KY 274
LS + EA + + +L P P + F+++V+ G K
Sbjct: 513 LSKSAR--TKEA---HRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 567
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
+++A+ ++ ++L ++ +YS LI H N+ K K+M ++GF
Sbjct: 568 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALS--FHKQMLRSGFSPNSTS 625
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLL 359
+S++R +EG V +A+ LL
Sbjct: 626 TISLVRGLFEEGMVVEADNAIQDLL 650
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/413 (20%), Positives = 164/413 (39%), Gaps = 59/413 (14%)
Query: 165 RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
+V+E M D + T L D + +E K K + D ++ +G P+ +T+++LI +
Sbjct: 204 KVFEEM-SGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINS 262
Query: 225 YLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
+G + EA S+ N M++ G + + +
Sbjct: 263 MCK---EGSVKEAMSLRNNMLEKG----------------------------VALDAVTY 291
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL-SVLRVCA 343
N L +GL SG++ + E + LL++ + E V SV+
Sbjct: 292 NTLITGL-------SGVLEMD--------EAMGLLEEMIHGETMVEPNVVTFNSVIHGLC 336
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP 403
K G + A + + E+ F + ++ + K++E+ EM
Sbjct: 337 KTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSF 396
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC 463
Y +I CK + + ESL+ + G++P + YI L GM ++ F E
Sbjct: 397 TYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM 456
Query: 464 LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
+ C+ + Y + + + AEE HM D+ + ++ + +++++ + +SGD
Sbjct: 457 HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHML-DEGLIPDSVTYSMLINMFANSGDL 515
Query: 524 VKAEKIYDLMCLKKYEIESAWMEKL----------DYVLSLNRKEVKKPVSLN 566
AE++ M + + A + L + VL L R+ K ++L+
Sbjct: 516 GAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALD 568
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 95/218 (43%), Gaps = 2/218 (0%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
+VL ++G DA LR++ + ++ M A +++ + R+MQ
Sbjct: 83 TVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQAS 142
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
V Y +I LC A + + L++E E+G++P + Y L Y G + +
Sbjct: 143 GVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECV 202
Query: 457 HLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILS 515
F E + P+ +Y ++SL G ++KA ++ + M ++ + N + N++++
Sbjct: 203 SKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMM-ERGLEPNVVTYNVLIN 261
Query: 516 AYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLS 553
+ G +A + + M K +++ L LS
Sbjct: 262 SMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLS 299
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 103/263 (39%), Gaps = 17/263 (6%)
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
R +Q G +P + +L R L + +A + + SG+E +YS L
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAAD------VDKAVELLREMCESGIEPNVVVYSCL- 189
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
L Y E +S + +EM G E + ++ +EG V+ A + +++E
Sbjct: 190 -LQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMME-- 246
Query: 363 NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
G+ Y + + K G +++ + M E+ + Y+ +I L E +
Sbjct: 247 RGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDE 306
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS----ECLEKCRPNRTIYGI 476
L++E + G + P+ + ++ L R+ AF C N + +
Sbjct: 307 AMGLLEEMIH-GETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNL 365
Query: 477 YLESLKNAGNIEKAEEIFNHMHS 499
+ L ++KA E+ + M S
Sbjct: 366 LIGGLLRVHKVKKAMELMDEMAS 388
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 140/310 (45%), Gaps = 15/310 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + ++R+ + + FD + ++ P + + L+ + A G + EA ++ M
Sbjct: 218 LISILCRKRRATEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRA---GNIPEAERVFTEM- 272
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
++ G P + + AL + G +++ A +F +L G E ++ L+ +H
Sbjct: 273 KVAGCMPNVYTYTIVIDALC-RCGQITR-----AHDVFAEMLDVGCEPNSITFNNLLRVH 326
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
E++ + +M++ G ++ K+G++++A K +++
Sbjct: 327 VKAGRT--EKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSP 384
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
F + AK+ + + ++ +M+E A+ Y+ ++ + + T++ L
Sbjct: 385 NASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLK 444
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKC-RPNRTIYGIYLESLKN 483
KE E ++P + +Y L MY +G + + F E + EKC +P+ +Y L+ L+
Sbjct: 445 KEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQLRK 504
Query: 484 AGNIEKAEEI 493
AG ++K EE+
Sbjct: 505 AGQLKKHEEL 514
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 54/244 (22%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
K +++ + G P +T++ LI ++ G LDEA + N M++ G P S
Sbjct: 334 KVLQVYNQMKRMGCPPDTVTYNFLIESHCK---DGNLDEALKVLNSMVK-KGCSPNASTF 389
Query: 258 NSLFRAL--VSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER 315
N LF ++ + G + Y + E L+ + + + I + + D +
Sbjct: 390 NGLFGSIAKLRDVNGAHRLYAKMKE----------LKCKANTVTYNILMRMFVDTKSTDM 439
Query: 316 ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME 375
+ LKKEM E DVE T+ L+
Sbjct: 440 VLKLKKEMD--------------------EDDVEPNVNTYCVLIA--------------- 464
Query: 376 AYAKIGEFMKSLEIFREM-QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM- 433
Y +G + + + FREM +E+ S+P Y K+++ L KA + + E L+ V+ G
Sbjct: 465 MYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQLRKAGQLKKHEELVAVMVDRGFA 524
Query: 434 -KPL 436
+PL
Sbjct: 525 TRPL 528
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 16/238 (6%)
Query: 346 GDVEDAEKTW--LRLLESDN-GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
G V + + W + L+++ N I F + Y + G +++ F M++
Sbjct: 153 GKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDK 212
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
A+ +I +LC+ +S ++ +P + Y NL + G F+E
Sbjct: 213 IAFSILISILCRKRRATEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIPEAERVFTE 271
Query: 463 C-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
+ C PN Y I +++L G I +A ++F M D N+ + N +L ++ +G
Sbjct: 272 MKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEM-LDVGCEPNSITFNNLLRVHVKAG 330
Query: 522 DFVKAEKIYDLM---------CLKKYEIESAWME-KLDYVLSLNRKEVKKPVSLNLSS 569
K ++Y+ M + IES + LD L + VKK S N S+
Sbjct: 331 RTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNAST 388
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 101/498 (20%), Positives = 191/498 (38%), Gaps = 84/498 (16%)
Query: 106 ELPEQWRRAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETG-- 163
EL ++ + LC + S +L+R + A W+ E GT+ +V ++E
Sbjct: 190 ELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAG-WIPPE-GTFTSVITACVKEGNVAEA 247
Query: 164 FRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIV 223
R+ + M+ + A+AT L + + ++I G VP+++T+ +LI
Sbjct: 248 LRLKDDMVN-CGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLID 306
Query: 224 AYLSAPVQGCLDEACSIYNRMIQLG-------------GYQPRPSLHNSLFRALVSKPGG 270
G +++A Y+ M G GY S N+ + G
Sbjct: 307 GCCK---NGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG 363
Query: 271 LSKYY--------------LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERI 316
L+ + + +A ++ ++ G+ Y+ +I H +DNI+
Sbjct: 364 LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAA-- 421
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA------- 369
+ KEM GF ++ K+GD+E+A + R+ ++ N +PT
Sbjct: 422 CKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA-NILPTDTTLGIIIK 480
Query: 370 -----------------FVYK------------MEAYAKIGEFMKSLEIFREMQERLGSA 400
FV + ++ + K G + ++REM E +
Sbjct: 481 GLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITP 540
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
S Y +I+ CK +L L+ + G+K + +Y L + + H
Sbjct: 541 STVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAH--- 597
Query: 461 SECLEKCR-----PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILS 515
E L + R PNR IY + KN N+E+A +++ M ++ I + ++ ++
Sbjct: 598 -ELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM-VNEGIPCDLKTYTSLID 655
Query: 516 AYLSSGDFVKAEKIYDLM 533
L SG + A I+ M
Sbjct: 656 GLLKSGRLLYASDIHTEM 673
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 9/259 (3%)
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
+AE F G+E+ ++ YS + L + N +SLL+ EM+ AG+ + S
Sbjct: 176 EAEQHFLQAKARGVELDQEAYSIFVHLLCLKPN-SGYALSLLR-EMRAAGWIPPEGTFTS 233
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
V+ C KEG+V +A + ++ + M+ Y G +L + E+ E
Sbjct: 234 VITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISE-- 291
Query: 398 GSASVP---AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
S VP Y +I+ CK E E G++ + S ++ YL
Sbjct: 292 -SGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQ 350
Query: 455 RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
F++ LE N + L L G + +A +++ + + + I N S N I+
Sbjct: 351 NAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIA-KGISPNVVSYNNII 409
Query: 515 SAYLSSGDFVKAEKIYDLM 533
+ + A K+Y M
Sbjct: 410 LGHCRKDNINAACKVYKEM 428
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 154/353 (43%), Gaps = 21/353 (5%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + + + +F + + ++ G P+E+ + LI + +G EA +++ M+
Sbjct: 307 LINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCR---KGHFTEAIRLFDEMV 363
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ +N + RAL K G +++AE I +L++G+ I +++ ++
Sbjct: 364 S-KEMKSTAVTYNLIARALC-KEG-----EMERAERILEEMLSTGMTIHSGLFNSVVA-G 415
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD--- 362
Q E + L EM + G + ++ + + + ++A WL++LE
Sbjct: 416 LLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCI 475
Query: 363 NGIPTPAFVYKMEAYAKIGEFMK-SLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
N + A ++ + G+ MK + E+ R M + Y+ +I+ CK + E
Sbjct: 476 NIATSNALIHGLCE----GKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEA 531
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLES 480
L + + G KP + ++ + Y +LG M + LHL +E +P+ YG ++
Sbjct: 532 LKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDG 591
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A +I+KA E N + + + N N ++ Y +G+ A + D M
Sbjct: 592 YCKAKDIQKANEYLNELMA-CGLKPNAVIYNALIGGYGRNGNISGAIGVLDTM 643
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 108/256 (42%), Gaps = 12/256 (4%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K+ K + + DD+I +G P F+ +I AY G ++EA + +M ++ G Q
Sbjct: 524 KDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDL---GKMEEALHLLGQM-KIEGVQ 579
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P + ++ G +Q+A + L+ GL+ IY+ LI + NI
Sbjct: 580 PDVVSYGTII------DGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNI 633
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
I +L M+ G + S++ G V++A+ + + ++ + +
Sbjct: 634 SGA-IGVLDT-MESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYT 691
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
++ KIG+ +++ F EM+ R + Y ++ CK+ E L E V +
Sbjct: 692 IMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSS 751
Query: 432 GMKPLMPSYINLTNMY 447
G+ P SY L +
Sbjct: 752 GIVPDNVSYNTLVTGF 767
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 155/386 (40%), Gaps = 52/386 (13%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+A + KE + + I +++++ G F+ ++ L G L+ + + M+
Sbjct: 377 IARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQR--TGRLESVVRLISEMV 434
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ G +P +L + + L Q+A I+ +L GL I + LI H
Sbjct: 435 KRG-MKPNDALMTACTKQLCQG------RRHQEAVGIWLKMLEKGLCINIATSNALI--H 485
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+ + + + + + M G E +++ C K+ +E+A K LR G
Sbjct: 486 GLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALK--LRDDMIRKGF 543
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
A+++ + AY +G+ ++L + +M+ V +Y II+ CKA++ +
Sbjct: 544 KPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANE 603
Query: 424 LMKEFVETGMKP-------LMPSY--------------------INLTNMYLNLGMHDRL 456
+ E + G+KP L+ Y I TN+ MH
Sbjct: 604 YLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMC 663
Query: 457 HLAFSE----CLEKCRPNR-----TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
H + E+ R N Y I ++ L G +++A F M S ++I N
Sbjct: 664 HAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRS-RSIPPNK 722
Query: 508 RSCNIILSAYLSSGDFVKAEKIYDLM 533
+ ++ AY SG+ +A K++D M
Sbjct: 723 ITYTTLMYAYCKSGNNEEASKLFDEM 748
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 106/240 (44%), Gaps = 13/240 (5%)
Query: 155 MRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
+++ + + GFR+ + M+ + D + L + + KE + + +F ++++ G VP+
Sbjct: 182 IKLGDLDEGFRL-KNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPN 240
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY 274
+TF LI + G LD A IY +M+ G+ P +N+L L K
Sbjct: 241 GVTFTTLIDGHCK---NGRLDLAMDIYRQMLN-QGFSPDVVTYNTLIYGLCKKGD----- 291
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
L+QA ++ + GL+ K Y+ LI + D E L++ M + V
Sbjct: 292 -LKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEG--DLETAFELRERMIKESIRLDDVV 348
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
+++ +EG DAEK +L + M + K G+ K+ E+ REMQ
Sbjct: 349 YTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQ 408
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 10/216 (4%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG-IPTPA-FVYKMEA 376
LK M+ +G + ++ KE +++A + +L DNG +P F ++
Sbjct: 193 LKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEML--DNGLVPNGVTFTTLIDG 250
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
+ K G +++I+R+M + S V Y+ +I LCK + + L+ E G+KP
Sbjct: 251 HCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPD 310
Query: 437 MPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
+Y L + G + L E R + +Y + L G AE++
Sbjct: 311 KITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLR 370
Query: 496 HMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKI 529
M +G+ + + +I++ + GD KA ++
Sbjct: 371 EMLR---VGLKPDDETYTMIMNEFCKKGDVKKASEL 403
>gi|357444885|ref|XP_003592720.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481768|gb|AES62971.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 553
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 173/421 (41%), Gaps = 37/421 (8%)
Query: 129 GTLVRILNAQKKWLRQEDGTYLAVHCMRIRENET---GFRVYEWMMQQHWYRFD----FA 181
G+ V +LN++K + + MR ++ + + EW+ Q+W+ F F
Sbjct: 86 GSAVSVLNSEKMKNQTIPKALVVGTLMRFKQLKKWNLVAEILEWLRAQNWWDFGKMDFFM 145
Query: 182 LAT---KLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
L T KL D+ G E+ + + G P+ ++ L+ AY G + A
Sbjct: 146 LITAYGKLGDFNGAEK-------VLGLMNKNGYAPNVVSQTALMEAYGKG---GRYNNAE 195
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT---SGLEIQK 295
+I+ RM Q G +P + + + V +K+ ++AE +F LL S L +
Sbjct: 196 AIFRRM-QTFGPEPSAFTYQIILKTFVQG----NKF--KEAEEVFDKLLNDEKSPLRPDQ 248
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
+++ +I+++ + +K R + M + G ++ S++ E + ++ +
Sbjct: 249 KMFNMMIYMYKKSGSHEKARQTF--ALMAERGIKKATVTYNSLMSF---ETNYKEVSNIY 303
Query: 356 LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
++ +D ++ + AY K ++L +F EM + + AY+ +++ +
Sbjct: 304 DQMQRADLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFSIS 363
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIY 474
E + K P + SY + + Y+N + F ++ PN Y
Sbjct: 364 GMVEQARIVFKSMRRDKYMPDLCSYTTMLSAYVNAPDMEGAEKFFKRLIQDGFEPNVVTY 423
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
G ++ A +IEK E + M + I N I+ A+ +GDF A + M
Sbjct: 424 GTLIKGYAKANDIEKVMEKYEEMLG-RGIKANQTILTTIMDAHGKNGDFDSAVNWFKEMA 482
Query: 535 L 535
L
Sbjct: 483 L 483
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 41/257 (15%)
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
A F + S ++ IY+ LI H+Y + D E +EM G + + V S+
Sbjct: 36 ARATFEAMRASHIKPNVHIYTSLI--HAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSI 93
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
+ A G+ E AE W +++N +P
Sbjct: 94 ISGYASAGNNEAAEH-WFEKFKAENLVPGGIV---------------------------- 124
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
Y+ I++ C+A E E+L+ + E G + + Y + N + + ++ L
Sbjct: 125 ------YNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKC-L 177
Query: 459 AFSECLEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
+F L+ C P YG ++ AGN+ KA +I M + N +I+
Sbjct: 178 SFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM-DKHGVSPNKMIYAMIMDG 236
Query: 517 YLSSGDFVKAEKIYDLM 533
Y GDF A K+++ M
Sbjct: 237 YARGGDFTAAFKVWEDM 253
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 113/287 (39%), Gaps = 39/287 (13%)
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
FH L GL Y ++ L + N+ K + +L+ EM + G K + ++
Sbjct: 180 FHRLKACGLSPTAATYGCIVKLFTKAGNMAKA-LDILE-EMDKHGVSPNKMIYAMIMDGY 237
Query: 343 AKEGDVEDAEKTW----------------------------------LRLLESDNGIPT- 367
A+ GD A K W L +E++ +PT
Sbjct: 238 ARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTI 297
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
+ ++ Y K G K+LE+F ++ V +Y+ ++ L KA + E ++ E
Sbjct: 298 ETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNE 357
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGN 486
+ G+ P SY LT Y G ++ F E + YG L++ +G
Sbjct: 358 MLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGA 417
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+++A E+F + +D + N + +L + G+ KA + + M
Sbjct: 418 MQRAAEVFQQI-TDAGLKHNRITYCTMLDGWARKGELSKARDLLNDM 463
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 118/267 (44%), Gaps = 20/267 (7%)
Query: 162 TGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHIL 221
F+V+E M+ + D + L K + K + ++I +P+ T+ +
Sbjct: 245 AAFKVWEDMVSAGL-KPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSI 303
Query: 222 IVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAE 280
+ Y+ G + +A +++R I+ G +P +NSL GL+K ++ A
Sbjct: 304 LDGYVKG---GNIQKALEVFDR-IKTAGLRPGVVSYNSLLS-------GLAKARQMENAR 352
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ + +L +G+ + Y+ L Y D E+ + + M++ ++L+
Sbjct: 353 LMLNEMLANGVVPNERSYTALT--EGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLK 410
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY--KMEAYAKIGEFMKSLEIFREMQERLG 398
C K G ++ A + + ++ +D G+ Y ++ +A+ GE K+ ++ +MQ+
Sbjct: 411 ACCKSGAMQRAAEVFQQI--TDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGF 468
Query: 399 SASVPAYHKIIELLCKAEET-ELTESL 424
Y I+ ++ +T E+TE+L
Sbjct: 469 HLDTICYTSFIKACFRSGDTEEVTETL 495
>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 135/332 (40%), Gaps = 28/332 (8%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
++ + + ++++ +G PS + F+ +I AY +A ++ + A Y M++ G P
Sbjct: 478 RYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLE---ERAFYAYGIMVKFG-LTPSS 533
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
S +SL +LV K L +A ++++ G + ++ + L Y
Sbjct: 534 STCSSLLISLVRKGS------LDEAWIALYDMIDKGFPVTNMAFT--VLLDGYFRIGAVN 585
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK- 373
L EM+ G + + G + DA + +L G FVY
Sbjct: 586 MAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRK--GFVPNNFVYNS 643
Query: 374 -MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
+ + K+G+ ++L++ REM +R + + II LCK +L + G
Sbjct: 644 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 703
Query: 433 MKPLMPSYINLTNMY---LNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEK 489
+ P + +Y L + Y ++G D L + S+ P+ T Y I + I +
Sbjct: 704 LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSD--SGWEPDLTTYNIRIHGYCTVRKINR 761
Query: 490 AEEIFNHMHS----DQTIGVNT---RSCNIIL 514
A I + S T+ NT CN+IL
Sbjct: 762 AVMILEELISVGIVPNTVTYNTMINAVCNVIL 793
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 157/401 (39%), Gaps = 58/401 (14%)
Query: 139 KKWLRQEDGTY-LAVH----CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKE 193
K W TY + +H C RI E +++ + M+Q+ + D A+ L + K
Sbjct: 85 KMWCSPTAFTYCILIHGLCQCQRIDE---AYQLLDEMIQKDCHP-DAAVYNCLIAGLCKM 140
Query: 194 RKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPR 253
K R++ ++ + VP +T+ LIV LDEA + +M
Sbjct: 141 GKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNA---LDEARKLMEKM--------- 188
Query: 254 PSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
K GL+ + + +N L +GL Q +
Sbjct: 189 -------------KESGLT------PDTVAYNALLNGLCKQNQL---------------- 213
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
E +S L +EM +AG E +V+ + G E+A K +++E G +
Sbjct: 214 EEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSL 273
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
M+ + K+ + ++ + +M R + +V Y +I +A+ +M++ + G+
Sbjct: 274 MDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGI 333
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEE 492
P + +Y L + G + H +EK C P+ Y I + L G ++ A
Sbjct: 334 SPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARL 393
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ M ++ N + N ++ + +G + K+ +LM
Sbjct: 394 LL-EMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELM 433
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 147/351 (41%), Gaps = 20/351 (5%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
T L V C + + ++ E M ++ D L + + K+ + + + ++++
Sbjct: 166 TSLIVGCCQTNALDEARKLMEKM-KESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMV 224
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
GR P +++ ++ + G +EA I +MI+ P +NSL
Sbjct: 225 EAGREPDTFSYNTVVACLCES---GKYEEAGKILEKMIE-KKCGPDVVTYNSLMDGFCK- 279
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI-DKERISLLKKEMQQA 326
+SK + +AE + +++ Y+ LI S D + D R+ ++M +A
Sbjct: 280 ---VSK--MDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRV---MEDMFKA 331
Query: 327 GFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKS 386
G +L K G +E+A + ++E D + + K+G+ +
Sbjct: 332 GISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDA 391
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNM 446
+ M ER ++ ++ +I+ CKA + + +++ E P + +Y L +
Sbjct: 392 RLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDG 451
Query: 447 YLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
Y +R+ AF+ + P++ Y LE L + G +E+A+E+ + M
Sbjct: 452 YCK---ANRMQDAFA--ILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLM 497
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 136/337 (40%), Gaps = 22/337 (6%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
+RV E M + D L D + K K + ++ + ++ + P +T+ IL+
Sbjct: 321 AYRVMEDMFKAGISP-DLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILV 379
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
G +D+A + M++ G QP N++ K G + + + + E +
Sbjct: 380 NGLCKL---GKVDDARLLLEMMLERG-CQPNLVTFNTMIDGFC-KAGKVDEGH-KVLELM 433
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
T + + G + QD ++L +A + E L S
Sbjct: 434 KEVSCTPDVVTYSTLIDGYCKANRMQD-----AFAILGISPDKASYSSMLEGLCST---- 484
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSAS 401
G VE+A++ + L+ PT + + + + ++L++ + M ER +
Sbjct: 485 ---GKVEEAQEV-MDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPN 540
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
+ Y +I LCK + E +++ +E G P + +Y +L + + + D + F
Sbjct: 541 LYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFK 600
Query: 462 ECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ C P++ Y I + +GN+EKA E+ M
Sbjct: 601 TMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLM 637
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 131/307 (42%), Gaps = 13/307 (4%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
LD+A S +NRM+ + P PS + F L++ +Y F N + S I
Sbjct: 48 LDDALSSFNRMLHM---HPPPSTVD--FNRLLTSIAKTKQY---PTVFSLSNQMDS-FGI 98
Query: 294 QKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
D+Y+ I ++S+ N S+L K ++ G + +++R EG + DA
Sbjct: 99 PPDVYTLNILINSFCHLNRPGFAFSVLAKILK-LGLQPDTATFTTLIRGLCVEGKIGDAL 157
Query: 353 KTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+ +++ + + K+G ++ + R M++ V Y II+ L
Sbjct: 158 HLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSL 217
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNR 471
CK + +L + V G+ P + +Y +L + NL + ++ + K P+
Sbjct: 218 CKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDV 277
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
I+ +++L G I +A ++ + M + + N + N ++ + + +A K++D
Sbjct: 278 VIFSTVVDALCKEGKITEAHDVVDMMII-RGVEPNVVTYNALMDGHCLQSEMDEAVKVFD 336
Query: 532 LMCLKKY 538
M Y
Sbjct: 337 TMVHNGY 343
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 146/363 (40%), Gaps = 53/363 (14%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+Q + D + T + D + K+R+ + ++F ++ QG P T+ LI + +
Sbjct: 198 MEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNL-- 255
Query: 231 QGC-LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
C ++ N+MI P + +++ AL K G ++ +A + ++
Sbjct: 256 --CEWKHVTTLLNQMIN-SKIMPDVVIFSTVVDAL-CKEGKIT-----EAHDVVDMMIIR 306
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
G+E Y+ L+ H Q +D
Sbjct: 307 GVEPNVVTYNALMDGHCLQSEMD------------------------------------- 329
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
+A K + ++ + ++ + Y KI K+ +F EM ++ + Y+ ++
Sbjct: 330 EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM 389
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR- 468
LC + +L E V G P + +Y L + YL H +A + +E
Sbjct: 390 HGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLD-YLCKKSHLDEAMALLKTIEGSNM 448
Query: 469 -PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
P+ IY I ++ + AG +E A +IF+++ S + + N R+ I+++ G +A
Sbjct: 449 DPDIQIYTIVIDGMCRAGELEAARDIFSNL-SSKGLRPNVRTYTIMINGLCRRGLLDEAN 507
Query: 528 KIY 530
K++
Sbjct: 508 KLF 510
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 117/324 (36%), Gaps = 56/324 (17%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D + + + D + KE K + D+ D +I +G P+ +T++ L+ + +Q +DEA
Sbjct: 276 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHC---LQSEMDEAV 332
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
+++ M+ GY P +N+L G + +A ++F + L Y
Sbjct: 333 KVFDTMVH-NGYAPNVISYNTLIN------GYCKIQRMDKATYLFEEMCQKELIPNTVTY 385
Query: 299 S----GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKT 354
+ GL + QD I L EM G +L K+ +++A
Sbjct: 386 NTLMHGLCHVGRLQDAI------ALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEA-MA 438
Query: 355 WLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCK 414
L+ +E N P + Y +I+ +C+
Sbjct: 439 LLKTIEGSNMDP----------------------------------DIQIYTIVIDGMCR 464
Query: 415 AEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTI 473
A E E + G++P + +Y + N G+ D + F E C P+
Sbjct: 465 AGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCT 524
Query: 474 YGIYLESLKNAGNIEKAEEIFNHM 497
Y + L +A ++ M
Sbjct: 525 YNTITQGLLQNKEALRAIQLLQEM 548
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 23/307 (7%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
+ EA ++ ++M + YQP N+L L +A + ++ G +
Sbjct: 150 ISEAVALVDQMFVME-YQPNTVTFNTLIHGLFLHNKA------SEAVALIDRMVARGCQP 202
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
Y ++ + +ID +SLLKK M++ E + +++ +V DA
Sbjct: 203 DLFTYGTVVNGLCKRGDIDLA-LSLLKK-MEKGKIEADVVIYTTIIDALCNYKNVNDALN 260
Query: 354 TWLRLLESDN-GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
+ E DN GI Y + G + + + +M ER + +V + +I+
Sbjct: 261 LFT---EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 317
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECLEK- 466
K + E L E ++ + P + +Y +L N + MHDRL A F + K
Sbjct: 318 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC---MHDRLDEAKHMFELMISKD 374
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
C PN Y ++ A +E+ E+F M +G NT + N ++ +GD A
Sbjct: 375 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYNTLIQGLFQAGDCDMA 433
Query: 527 EKIYDLM 533
+KI+ M
Sbjct: 434 QKIFKKM 440
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 129/310 (41%), Gaps = 25/310 (8%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D+I + P+ +TF LI A++ +G L EA +Y+ MI+ P ++SL
Sbjct: 296 LLSDMIERKINPNVVTFSALIDAFVK---EGKLVEAEKLYDEMIK-RSIDPDIFTYSSLI 351
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK----ERIS 317
L +A+ +F L I KD + ++ ++ K E
Sbjct: 352 NGFCMHD------RLDEAKHMFE------LMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 399
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--ME 375
L +EM Q G ++++ + GD + A+K + +++ +G+P Y ++
Sbjct: 400 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS--DGVPPDIITYSILLD 457
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
K G+ K+L +F +Q+ + Y+ +IE +CKA + E L G+KP
Sbjct: 458 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 517
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ Y + + + G+ + F E E PN Y + + G+ + E+
Sbjct: 518 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI 577
Query: 495 NHMHSDQTIG 504
M S +G
Sbjct: 578 KEMRSCGFVG 587
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/421 (20%), Positives = 162/421 (38%), Gaps = 52/421 (12%)
Query: 116 LAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWM--MQQ 173
L LC E + L+ ++ +Y V +E+E G + Y M
Sbjct: 91 LKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVG-KAYTLFCEMLD 149
Query: 174 HWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGC 233
D + D + K + K ++ + ++ +P T++ L+ YLS+ G
Sbjct: 150 RGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSS---GQ 206
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
L EA I +M + G QP + S+ + K GG + +A I ++++ S
Sbjct: 207 LKEAVRILKQMSRHG--QPPNGVTYSMLIDCLCKFGGHT-----EAREILNSMIQSRGNP 259
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
Y GL LH Y D ++ L M Q G +
Sbjct: 260 NVATYGGL--LHGYATKGDLVEMNNLIDLMVQNGVRPDHHI------------------- 298
Query: 354 TWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
F ++ AY K G +++ F +M+++ + +Y +I+ LC
Sbjct: 299 ----------------FNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLC 342
Query: 414 KAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRT 472
K + S + ++ G+ P + + NL + + G ++ F E +++ RP
Sbjct: 343 KIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVV 402
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDL 532
++ ++ L G + +A+ +F+ M ++ N S N I+ Y +G + K+ D
Sbjct: 403 VFTTMIDKLFKEGKVTEAKTLFDLM-PIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDD 461
Query: 533 M 533
M
Sbjct: 462 M 462
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 144/367 (39%), Gaps = 54/367 (14%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ + R D T+L +GK + + F ++ +G P + + +I A
Sbjct: 291 MRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKA-- 348
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSL--HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
G LD+A ++ M G + PS+ +N++ +AL SK + F +
Sbjct: 349 -GRLDDAMKLFQEM---GTLRCIPSVVTYNTIIKALFE-----SKSRASEVPSWFERMKE 399
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
SG+ YS I + + E+ +L +EM + GF
Sbjct: 400 SGISPSSFTYS--ILIDGFCKTNRMEKAMMLLEEMDEKGFP------------------- 438
Query: 349 EDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
P P A+ ++A K + + E+F+E++E GS+S Y
Sbjct: 439 -----------------PCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAV 481
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK- 466
+I+ L KA + ++ E + G P + +Y L + GM D E
Sbjct: 482 MIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHG 541
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
C P+ Y I L L G +A E+ ++M T+ + S N +L A +G F +A
Sbjct: 542 CIPDINSYNIILNGLAKTGGPHRAMEMLSNM-KQSTVRPDVVSYNTVLGALSHAGMFEEA 600
Query: 527 EKIYDLM 533
K+ + M
Sbjct: 601 AKLMEEM 607
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 8/125 (6%)
Query: 381 GEFMKSLEIFREMQ-ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
G++ K E++ EM E Y +I CK + L+ E E GM+P
Sbjct: 208 GQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKI 267
Query: 440 YINLTNMYLNLGMHDRLHLAFSECLEK----CRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
Y L ++ L D +H A S E CRP+ Y + L AG I++A F
Sbjct: 268 YTMLITLFFKL---DDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFY 324
Query: 496 HMHSD 500
M +
Sbjct: 325 EMQRE 329
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ A+ K+G + ++ EM+E + Y +I L K ++ SL +E
Sbjct: 237 ISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYC 296
Query: 434 KPLMPSYINLTNMYLNLGMHDRL----HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEK 489
+P + +Y T + LG R+ H + E CRP+ + + L AG ++
Sbjct: 297 RPDVFTY---TELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDD 353
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSS 520
A ++F M + + I + + N I+ A S
Sbjct: 354 AMKLFQEMGTLRCIP-SVVTYNTIIKALFES 383
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 104/488 (21%), Positives = 189/488 (38%), Gaps = 44/488 (9%)
Query: 116 LAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETG--FRVYEWMMQQ 173
L LC S + L++++ Q + Y V E ETG ++ M +Q
Sbjct: 235 LKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQ 294
Query: 174 HWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGC 233
+ D + D + K R K + + G P +T+ +I Y + G
Sbjct: 295 -GVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATL---GR 350
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
L EA ++ M + G P NS +L G SK + AEF F ++ G
Sbjct: 351 LKEAAKMFREMKKRG-LIPNIVTCNSFLASLCKH--GRSK---EAAEF-FDSMTAKGH-- 401
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
+ DI+S LH Y + L M+ G V ++ AK G V+DA
Sbjct: 402 KPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAML 461
Query: 354 TWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
+ + + + + ++++G ++E F +M R + Y II+ C
Sbjct: 462 IFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFC 521
Query: 414 KAEETELTESLMKEFVETGM-KPLMPSYINLTNMYLNLG----MHDRLHLAFSECLEKCR 468
+ L+ E + G+ +P + + ++ N G HD LA ++ E R
Sbjct: 522 MHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLA-TDIGE--R 578
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKA 526
P + ++ G ++KA +I + M + +GV + + N +L Y +G
Sbjct: 579 PGVITFNSLIDGYCLVGKMDKAFKILDAM---EVVGVEPDIVTYNTLLDGYFKNGRINDG 635
Query: 527 EKIYDLMCLK-------KYEIESAWMEKLDYVLSLNRK---EVKKPVSLNLSSEQRENLI 576
++ M K Y I A + + ++ +K ++ ++ +S +
Sbjct: 636 LTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVS------IY 689
Query: 577 GLLLGGLC 584
G++LGGLC
Sbjct: 690 GIILGGLC 697
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 106/260 (40%), Gaps = 15/260 (5%)
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+F +L +GL++ + + L+ Y N +E +++L M + G V S++
Sbjct: 179 LFGCILRTGLKMDQITANTLLKCLCYA-NRTEEAVNVLLHRMSELGCVP-NAVSYSIVLK 236
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
+ + L+++ G +P A+ + + GE K+ +F EM +
Sbjct: 237 ALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGV 296
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
V Y+ II+ LCKA + E ++++ G +P +Y + + Y LG
Sbjct: 297 KPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAK 356
Query: 459 AFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM----HSDQTIGVNTRSCNII 513
F E ++ PN +L SL G ++A E F+ M H T +
Sbjct: 357 MFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCT-----L 411
Query: 514 LSAYLSSGDFVKAEKIYDLM 533
L Y S G F +++ M
Sbjct: 412 LHGYASEGCFADMIGLFNSM 431
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
+ +R+ L +MQ+ G+E +L +++RV ++EG V DA + L ++S N +
Sbjct: 76 ESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRV-DAALSLLDEMKS-NTFDADIVL 133
Query: 372 YK--MEAYAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTESLMK 426
Y ++ + K+G+ + + F EM+ + VP Y ++ +LCKA + + +
Sbjct: 134 YNVCIDCFGKVGKVDMAWKFFHEMK---ANGLVPDDVTYTSMMGVLCKANRLDEAVEIFE 190
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLH-LAFSECLEKCRPNRTIYGIYLESLKNAG 485
+ + P +Y + Y + G D + L + + C P+ Y L L G
Sbjct: 191 QMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKG 250
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+KA IF M D + T NII+ +G+ A K+ D M
Sbjct: 251 KTDKALRIFEEMKRDAMPNLPTY--NIIIGMLCKAGNVEAAFKVRDAM 296
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 149/360 (41%), Gaps = 33/360 (9%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T + + K + + +IF+ + +VP ++ +I+ Y SA G DEA S+ R
Sbjct: 170 TSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSA---GKFDEAYSLLER 226
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
+ G P +N + L K G K A IF + + Y+ +I
Sbjct: 227 Q-RAKGCIPSVVAYNCILTCL-GKKGKTDK-----ALRIFEEMKRDAMP-NLPTYNIIIG 278
Query: 304 LHSYQDNIDKERISLLKKEMQQAG-FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+ N+ E ++ M++AG F + + + + R+C K +++A + + D
Sbjct: 279 MLCKAGNV--EAAFKVRDAMKEAGLFPNVRTINIMIDRLC-KAQKLDEACSIFEGM---D 332
Query: 363 NGIPTP---AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
+ +P F ++ K G + I+ M + +V Y +I K + E
Sbjct: 333 YKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKE 392
Query: 420 LTESLMKEFVETGMKP---LMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR---PNRTI 473
+ KE + +G P L+ +Y++ G ++ F E K R P+
Sbjct: 393 DGHKMYKEMMRSGCSPDLMLLNTYMDCV---FKAGETEKGRALFEEI--KARGFLPDTRS 447
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
Y I + SL AG + E++ M DQ ++TR+ N ++ + SG KA ++ + M
Sbjct: 448 YSILIHSLVKAGFARETYELYYAMK-DQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 506
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 7/254 (2%)
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+F+ + G E+ + + LI + S + +D +SLL EM+ F+ VL +V
Sbjct: 83 LFNQMQELGYEVNVHLLTTLIRVFSREGRVDAA-LSLLD-EMKSNTFD-ADIVLYNVCID 139
Query: 342 C-AKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
C K G V+ A K + ++++ +P + M K +++EIF +M++
Sbjct: 140 CFGKVGKVDMAWK-FFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQV 198
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
AY+ +I A + + SL++ G P + +Y + G D+
Sbjct: 199 PCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRI 258
Query: 460 FSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
F E PN Y I + L AGN+E A ++ + M + + N R+ NI++
Sbjct: 259 FEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMK-EAGLFPNVRTINIMIDRLCK 317
Query: 520 SGDFVKAEKIYDLM 533
+ +A I++ M
Sbjct: 318 AQKLDEACSIFEGM 331
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 145/355 (40%), Gaps = 23/355 (6%)
Query: 204 DDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRA 263
D + G P+ T +I+I A LDEACSI+ M P + SL
Sbjct: 294 DAMKEAGLFPNVRTINIMIDRLCKAQK---LDEACSIFEGM-DYKVCSPDGATFCSLIDG 349
Query: 264 LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEM 323
L K G + Y I+ +L + +Y+ LI D KE + KEM
Sbjct: 350 L-GKQGRVDDAYR-----IYERMLDADQIPNVVVYTSLIRNFFKCDR--KEDGHKMYKEM 401
Query: 324 QQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGE 382
++G +L + + K G+ E + +++ +P T ++ + + K G
Sbjct: 402 MRSGCSPDLMLLNTYMDCVFKAGETEKG-RALFEEIKARGFLPDTRSYSILIHSLVKAGF 460
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
++ E++ M+++ AY+ +I+ CK+ + L++E G P + +Y +
Sbjct: 461 ARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGS 520
Query: 443 LTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQ 501
+ + + D ++ F E N+ IY ++ G +++A + M +
Sbjct: 521 VVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQ-K 579
Query: 502 TIGVNTRSCNIILSAYLSSGDFVKAEKIYD-LMCLKKYEIESAWMEKLDYVLSLN 555
+ N + N +L VKAE+I + L+C + + ++ Y + +N
Sbjct: 580 GLTPNVYTWNCLLDG------LVKAEEINEALVCFQSMKDLKCTPNQITYCILIN 628
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 155/367 (42%), Gaps = 35/367 (9%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E G ++Y+ MM+ D L D + K + K R +F++I +G +P ++ I
Sbjct: 392 EDGHKMYKEMMRSGCSP-DLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSI 450
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY--LQQ 278
LI + + A G E +Y M G + +N++ K G ++K Y L++
Sbjct: 451 LIHSLVKA---GFARETYELYYAMKDQGCVLDTRA-YNTVIDGFC-KSGKVNKAYQLLEE 505
Query: 279 AEFIFHN--LLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
+ + H+ ++T G + GL + D +D+ +L +E + G E + +
Sbjct: 506 MKTMGHHPTVVTYG-----SVVDGLAKI----DRLDEAY--MLFEEAKSNGIELNQVIYS 554
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQ 394
S++ K G V++A +++ G+ + + ++ K E ++L F+ M+
Sbjct: 555 SLIDGFGKVGRVDEAYLVMEEMMQ--KGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMK 612
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
+ + + Y +I LCK + +E + G+K P+ I T M L
Sbjct: 613 DLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLK---PNTITYTAMISGLAKSG 669
Query: 455 RLHLAFSECLEKCR-----PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
+ A S E+ R P+ Y +E L A A ++F + ++T++
Sbjct: 670 NVAQA-SSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRL-KGCSIHTKT 727
Query: 510 CNIILSA 516
C +L A
Sbjct: 728 CVALLDA 734
>gi|428179291|gb|EKX48163.1| hypothetical protein GUITHDRAFT_86178 [Guillardia theta CCMP2712]
Length = 557
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 146/328 (44%), Gaps = 21/328 (6%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
PS + LI AY G L+ A N M++ GG P + N+L +A V + G L+
Sbjct: 31 PSVHCYGTLIKAYGQL---GQLEAAFETLNGMVK-GGPAPSIRVINALLQACV-RAGNLT 85
Query: 273 KYYLQQAEFIFHNLLTSGL--EIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE 330
A+ +F +L +GL +Q S I +++Y E+ + EM++AG +
Sbjct: 86 A-----AQTLFSSLRGAGLCISLQPTGVSFNIMVNAYARRRKVEKAFKMLLEMRRAGCKP 140
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY--AKIGEFMKSLE 388
+ ++++ C G + AE+ + E GIP A+ Y Y A+ ++ K+
Sbjct: 141 DQITYTTLVKACVAAGQFDRAERLLGEMEEL--GIPPNAYSYNCILYGLAQKLQWGKATR 198
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+ + M+E A++ +Y I +A + +L +E G+ P + + + Y
Sbjct: 199 LLQRMEEDGVEANLLSYSYCILACVRARRMKEASALFEEMRRKGIVPNLFVMNTMMSGYA 258
Query: 449 NLGMHDRLHLAFSECLEKCR--PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN 506
GM D + L+ R N + +E+ NAG +KA E+ M + + V+
Sbjct: 259 AKGMVDEAQ-GIMKLLQDMRIKANAMTFSSLIEAFINAGYADKAVEVKRKME-ELGVEVD 316
Query: 507 TRSCNIILSAYLSSGDFVKA-EKIYDLM 533
+L AY S G +A EK+ +++
Sbjct: 317 MVVSTQMLKAYTSMGKVEEAIEKLEEIV 344
>gi|224144700|ref|XP_002325381.1| predicted protein [Populus trichocarpa]
gi|222862256|gb|EEE99762.1| predicted protein [Populus trichocarpa]
Length = 1071
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 131/286 (45%), Gaps = 16/286 (5%)
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+ ++I I A L A G L A SIY M+ LG + P +N++ +S G K
Sbjct: 770 VAYNIFIKAMLEA---GRLHFATSIYEHMLLLG-FTPSIQTYNTM----ISVYGRGRK-- 819
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
L +A +F+ +SG+ + + Y +I + Y + SLL +MQ+ G + G
Sbjct: 820 LDKAVEVFNTACSSGVSLDEKAYMNMI--NYYGKAGKRHEASLLFAKMQEEGIKPGVVSY 877
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM 393
+ +V A G + E+ + +++E D G P +F Y ++AY++ + +++ E M
Sbjct: 878 NVMAKVYAMSGLYHEVEELF-KVMERD-GCPPDSFTYLSLVQAYSESSKCLEAEETINAM 935
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
Q++ S + ++ L KA E + E + G+ P + + Y++ G
Sbjct: 936 QKKGIPPSCAHFKHLLYALVKAGLMVEAERVYMELLSAGLNPDLVCCRAMLRGYMDYGHV 995
Query: 454 DRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
++ + + E + +R I + K+AG +AE +F M S
Sbjct: 996 EKGIKFYEQIRELVKADRFIMSAAVHLYKSAGKKLEAEVLFESMKS 1041
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 131/328 (39%), Gaps = 22/328 (6%)
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS- 289
+G L +A ++ ++I+LG L + +L+S G +K L+QA+ +F + S
Sbjct: 643 EGDLFKAEAVNGQLIKLGS-----KLEDETIASLISAYGRQNK--LKQAQEVFAAVADSP 695
Query: 290 --GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGD 347
G I + + + E LL +E+ Q G G + V+ G
Sbjct: 696 ILGNPIINSMIDACVKCGKF------EEAYLLYEEVAQRGHNLGAVGIGMVVNALTNSGK 749
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
+AE R ++ + T A+ ++A + G + I+ M + S+ Y+
Sbjct: 750 HPEAENIIRRSIQDRMELDTVAYNIFIKAMLEAGRLHFATSIYEHMLLLGFTPSIQTYNT 809
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK- 466
+I + + + + + +G+ +Y+N+ N Y G L F++ E+
Sbjct: 810 MISVYGRGRKLDKAVEVFNTACSSGVSLDEKAYMNMINYYGKAGKRHEASLLFAKMQEEG 869
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI--ILSAYLSSGDFV 524
+P Y + + +G + EE+F M D G S ++ AY S +
Sbjct: 870 IKPGVVSYNVMAKVYAMSGLYHEVEELFKVMERD---GCPPDSFTYLSLVQAYSESSKCL 926
Query: 525 KAEKIYDLMCLKKYEIESAWMEKLDYVL 552
+AE+ + M K A + L Y L
Sbjct: 927 EAEETINAMQKKGIPPSCAHFKHLLYAL 954
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 100/480 (20%), Positives = 178/480 (37%), Gaps = 114/480 (23%)
Query: 154 CMRIRENETGFR----VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQ 209
C+ ++E + G+R + WM Q Y + T L G+ K F +++
Sbjct: 158 CVVLKE-QKGWREARDFFSWMKLQLSYHPSVIVYTILLRIYGQVGKIKLAEQTFLEMLEV 216
Query: 210 GRVPSEMTFHILIVAYL------------SAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
G P E+ ++ +Y SA + + + ++YN M L Q + SLH
Sbjct: 217 GCEPDEVACGTMLCSYARWGHHKAMFSFYSAIKERGIVVSIAVYNFM--LSSLQKK-SLH 273
Query: 258 NS---LFRALVSKP------------GGLSKYYLQQAEF-IFHNLLTSGLEIQKDIYSGL 301
L+R +V K L K L + F F+ + T GL ++ IYS L
Sbjct: 274 GKVIVLWRQMVDKRVAPNNFTYTVVISSLVKEGLHKEAFKTFNEMRTMGLVPEEVIYSLL 333
Query: 302 IWLHSYQDN----------IDKERI--------SLLKK---------------EMQQAGF 328
I + + N + RI SLL +MQ
Sbjct: 334 ITVSTKNSNWHEALKLYEDMRSHRIVPSKFTCASLLTMYYKIKDYSKALSLFIQMQSKNI 393
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
+ + ++R+ K G EDA+KT+ S ++ + + G F K+L
Sbjct: 394 AADEVIYGLLIRIYGKLGLYEDAQKTFEETERSGLLSNEKTYLAMAQVHLSSGNFEKALS 453
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+ M+ R S AY +++ C E+ + E + + G P S ++ N+Y+
Sbjct: 454 VIEVMKSRNIWLSRFAYIVLLQCYCMKEDLDSAEVTFQALSKIGC-PDAGSCSDMINLYV 512
Query: 449 NLG---------MHDRLHLA-FSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
LG +H R +L F E ++ ++ G ++ AE++ M
Sbjct: 513 RLGFTEKAKDFIVHIRKYLVDFDE---------ELFNTVIKVFCKEGMLKDAEQLVYEMG 563
Query: 499 SDQT-------------------------IGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++ + + +T + +ILS YL +G+F K E+ L+
Sbjct: 564 TNASFKDNRFFKTFSNVMYGENKELENIMVSADTTALGLILSLYLENGNFTKTEEFLKLI 623
>gi|62734288|gb|AAX96397.1| expressed protein [Oryza sativa Japonica Group]
gi|77550330|gb|ABA93127.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 661
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 150/351 (42%), Gaps = 29/351 (8%)
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGG- 270
+PS T+ IL S G L++A + + M++ G P P ++ + V+ G
Sbjct: 206 LPSPTTYRILA---RSLAENGKLEQAIELKDGMLERGLVAPDPQVYALVMGGFVNAGDGD 262
Query: 271 -LSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
+ Y + E + + G+ +Y L+ + + ++KE + + +
Sbjct: 263 TVVSLYEELVEKLGGGQILDGM-----VYGNLMKGY-FLKGMEKEAMDCYAEVLG----- 311
Query: 330 EGKEVLLS------VLRVCAKEGDVEDAEKTWLRLLESDN-----GIPTPAFVYKMEAYA 378
EG +V VL + G ++DA + + R+ E + + +F ++AY
Sbjct: 312 EGSKVRFGAVSYNMVLDALGRNGKLDDALQLFDRMCEEHDPPRRIAVNLGSFNVMVDAYC 371
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
+ F ++E+F +M E+ + +Y+ +I+ L K E E L KE E G+ P
Sbjct: 372 RAERFQDAIEVFGKMGEKRCAPDALSYNNLIDWLGKNELVGEAEQLYKEMGERGVNPDEY 431
Query: 439 SYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+Y+ L Y + D F++ + RPN + + L +++A+ F+ M
Sbjct: 432 TYVLLIESYFKVDRVDDSVSYFNKMFVAGLRPNANAFNKVIGGLVKVDRLDEAQGFFDKM 491
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL 548
++ + N S ++L AY+ + A K+ + L + + S ++ L
Sbjct: 492 -PEKEVKPNIGSYELLLRAYIDAARLDDAIKMAKCILLDESVVFSDELKAL 541
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 150/374 (40%), Gaps = 16/374 (4%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M D L DY+ K + + R +FD + +G P T+ L+ Y +
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT--- 351
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G L E + + M++ G P ++ +F L+ K + QA +F + G
Sbjct: 352 KGALVEMHGLLDLMVR-NGIHP----NHYVFSILICAYAKQGK--VDQAMLVFSKMRQQG 404
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
L Y +I + ++ ++M G V S++ +
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYF--EQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKII 409
A++ L +L+ + T F ++++ K G ++S ++F ++ R+G + Y +I
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPDIITYSTLI 521
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCR 468
+ C A + + L+ V GMKP +Y L N Y + M D L L
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVS 581
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
P+ Y I L+ L A+E++ + T + + NIIL + +A +
Sbjct: 582 PDIITYNIILQGLFQTRRTAAAKELYVGITESGT-QLELSTYNIILHGLCKNNLTDEALR 640
Query: 529 IYDLMCLKKYEIES 542
++ +CL ++E+
Sbjct: 641 MFQNLCLTDLQLET 654
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 143/344 (41%), Gaps = 27/344 (7%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
R +FD+++ +GR S + L+ + A S YNRM + G + P+L
Sbjct: 39 RHVFDELLRRGRGASIYGLN----CALADVARHSPAAAVSRYNRMARAGADEVTPNL--C 92
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
+ L+ + L A N++ G + ++ L+ D + + ++
Sbjct: 93 TYGILIGSCCCAGRLDLGFAAL--GNVIKKGFRVDAIAFTPLLK-GLCADKRTSDAMDIV 149
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEA 376
+ M Q G +L+ E ++A + L+++ D G P ++ +
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE-LLQMMPDDGGDCPPDVVSYTTVING 208
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
+ K G+ K+ + EM +R +V Y II LCKA+ + ++ V+ G+ P
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 437 MPSYINLTNMYLN-------LGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEK 489
+Y ++ + Y + +G ++H S+ +E P+ Y ++ L G +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMH---SDGVE---PDVVTYNSLMDYLCKNGRCTE 322
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A ++F+ M + + + + +L Y + G V+ + DLM
Sbjct: 323 ARKMFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365
>gi|359487410|ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Vitis vinifera]
Length = 538
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 92/436 (21%), Positives = 178/436 (40%), Gaps = 62/436 (14%)
Query: 157 IREN--ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
IREN E+ +++ + +QHWY TKL +GK ++ + +F+ ++++G P+
Sbjct: 103 IRENRYESALKIFGLLRKQHWYEPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPT 162
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY 274
+ L+ AY + G LD+A M + +P ++ L + + L ++
Sbjct: 163 LDVYTALVSAYGHS---GQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCCTT----LGRF 215
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
L E IF + G+E Y+ +I + D + SL EM ++G
Sbjct: 216 DL--IERIFTEMSYLGIECSTVTYNTIIDGYGKADMFELMESSL--TEMIESGTCLPDIF 271
Query: 335 LL-SVLRVCAKEGDVEDAEKTW--LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFR 391
L S + G +E EK + +L+ I T F + +Y K + K + +
Sbjct: 272 TLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPDIKT--FNILIRSYGKACMYEKMVSVME 329
Query: 392 EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
M++R S ++ ++ +IE+ + E E + G+KP +Y +L + Y
Sbjct: 330 FMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAY---- 385
Query: 452 MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM-HSDQTIGVNTRSC 510
AG ++K + I + +SD T+ +T
Sbjct: 386 ------------------------------SKAGYLKKVDSILRQIENSDVTL--DTPFF 413
Query: 511 NIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL-------DYVLSLNRKEVKKPV 563
N +LSAY +GD + +++ +M +K + ++ + + + EV
Sbjct: 414 NCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMIQAYNAQGMIEAAQNLEVNMIT 473
Query: 564 SLNLSSEQRENLIGLL 579
+ N S ++E IG +
Sbjct: 474 TKNKSGTRKEQFIGFV 489
>gi|168011113|ref|XP_001758248.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690704|gb|EDQ77070.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 658
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
L QA+ FHN+ + IYS L + +Y++ + L K+M + + + +
Sbjct: 305 LDQAKAAFHNMKVENVPANAFIYSRL--MVAYRNARQWDGTIRLLKDMYASNIKPNQFIF 362
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
++ K G + A +T+ ++ + + +EA+ + G ++L++ ++MQE
Sbjct: 363 NILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQE 422
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
R S+ Y+ I+ L + L+ E G+ P + +Y L + Y G R
Sbjct: 423 RECVPSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLDPNVVTYTTLVDSY---GTSKR 479
Query: 456 LHLAFSECLEKCR-----PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC 510
A SE L++ + P+ ++Y S G E+A E+F M D + +N
Sbjct: 480 YREA-SEYLKQMKSQGLQPSTSVYCALANSYAKRGLCEQAMEVFKSMEKD-GVELNLSML 537
Query: 511 NIILSAYLSSGDFVKAEKIYD 531
N++++A+ +G +V+A ++D
Sbjct: 538 NLLINAFGVAGKYVEAFSVFD 558
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 69/363 (19%), Positives = 146/363 (40%), Gaps = 48/363 (13%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
+ KE + + +FD + G P M ++ ++ + + L+ A + N+M + G
Sbjct: 88 LSKESRVEEAMLLFDQLKQLGVSPGPMAYNAIVG---TCAREDRLETALELMNQM-RGSG 143
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
+QP + +F+A K G+ + N+ GLE+ +Y+ +I +
Sbjct: 144 FQPDNVNYTLVFQACAKKRVGVDVI-----SRVCANIEQEGLEMDTKLYNDVINAYCRAG 198
Query: 310 NIDK------------------------ERISLLKK---------EMQQAGFEEGKEVLL 336
+ DK E + ++++ EM+ ++ L
Sbjct: 199 DPDKAFQYMGLMQACDLVPDVRSYSSLIETLVVVRRLDDAEAAYAEMKSKSYKINLRTLN 258
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQ 394
++L ++ +E EK L D G+ F Y + +AY++ G ++ F M+
Sbjct: 259 ALLSAYTRKSLLEQVEK--LMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMK 316
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
A+ Y +++ A + + T L+K+ + +KP + L + Y G
Sbjct: 317 VENVPANAFIYSRLMVAYRNARQWDGTIRLLKDMYASNIKPNQFIFNILIDTYGKFGRLP 376
Query: 455 RLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
+ F++ E +P+ + +E+ AG I +A ++ M + + + + NII
Sbjct: 377 QAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQERECVP-SLHTYNII 435
Query: 514 LSA 516
L+A
Sbjct: 436 LNA 438
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 101/214 (47%), Gaps = 6/214 (2%)
Query: 323 MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKI 380
+++ G + G L+++ V K E+ ++ + +L+ +G+ + F Y M + +
Sbjct: 385 LRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLIS--DGLISNVFSYNMIINCFCRA 442
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
+ E FR+MQ R ++ ++ +I CK + L++ +E G+KP + ++
Sbjct: 443 KLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTF 502
Query: 441 INLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
++ + + + F+E +E PN IY I + SL G++ ++ ++ M
Sbjct: 503 SSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQK 562
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ I +T S N ++ + KA+K++D M
Sbjct: 563 -EGISPDTYSYNALIQIFCRMNKVEKAKKLFDSM 595
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/241 (18%), Positives = 98/241 (40%), Gaps = 41/241 (17%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+ A F ++ G+ ++ LI H IDK R L + + + G +
Sbjct: 445 MDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKAR--KLLESLLENGLKPDIFTF 502
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREM 393
S++ + E+A + + ++E GI A +Y + + IG+ +S+++ R M
Sbjct: 503 SSIVDGLCQIKRTEEALECFTEMIEW--GINPNAVIYNILIRSLCTIGDVARSVKLLRRM 560
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
Q+ S +Y+ +I++ C+ + E + L +G+
Sbjct: 561 QKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLN------------------- 601
Query: 454 DRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
P+ Y ++E+L +G +E+A+++F M ++ ++ CN+I
Sbjct: 602 ---------------PDNYTYSAFIEALSESGRLEEAKKMFYSMEANGC-SPDSYICNLI 645
Query: 514 L 514
+
Sbjct: 646 I 646
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 23/307 (7%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
+ EA ++ ++M + YQP N+L L +A + ++ G +
Sbjct: 166 ISEAVALVDQMFVME-YQPNTVTFNTLIHGLFLHNKA------SEAVALIDRMVARGCQP 218
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
Y ++ + +ID +SLLKK M++ E + +++ +V DA
Sbjct: 219 DLFTYGTVVNGLCKRGDIDLA-LSLLKK-MEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 354 TWLRLLESDN-GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
+ E DN GI Y + G + + + +M ER + +V + +I+
Sbjct: 277 LFT---EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECLEK- 466
K + E L E ++ + P + +Y +L N + MHDRL A F + K
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC---MHDRLDEAKHMFELMISKD 390
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
C PN Y ++ A +E+ E+F M +G NT + N ++ +GD A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYNTLIQGLFQAGDCDMA 449
Query: 527 EKIYDLM 533
+KI+ M
Sbjct: 450 QKIFKKM 456
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 129/310 (41%), Gaps = 25/310 (8%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D+I + P+ +TF LI A++ +G L EA +Y+ MI+ P ++SL
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVK---EGKLVEAEKLYDEMIK-RSIDPDIFTYSSLI 367
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK----ERIS 317
L +A+ +F L I KD + ++ ++ K E
Sbjct: 368 NGFCMHD------RLDEAKHMFE------LMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--ME 375
L +EM Q G ++++ + GD + A+K + +++ +G+P Y ++
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS--DGVPPDIITYSILLD 473
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
K G+ K+L +F +Q+ + Y+ +IE +CKA + E L G+KP
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ Y + + + G+ + F E E PN Y + + G+ + E+
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI 593
Query: 495 NHMHSDQTIG 504
M S +G
Sbjct: 594 KEMRSCGFVG 603
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/374 (18%), Positives = 145/374 (38%), Gaps = 49/374 (13%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERK-------FAKCRDIFDDIIN----- 208
+ +YE + Q WY + + + +GK + FAK + D +
Sbjct: 211 QRALELYECLTMQQWYATNARMVATILSVLGKANQEGIAVEIFAKAESVIADTVQVYNAM 270
Query: 209 ----------------------QGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQ 246
+G P ++F+ LI +A V+ C + + +
Sbjct: 271 MGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLI----NAKVKSCATVSGLAIELLDE 326
Query: 247 LGGYQPRPSL--HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
+G + RP + +N+L A + L++A +F ++ ++ Q D+++ +
Sbjct: 327 VGKFGLRPDIITYNTLISACSRESN------LKEAIGVFSHMESN--RCQPDLWTYNAMI 378
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
Y + L ++++ GF S+L +KEG+ E +++ G
Sbjct: 379 SVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFG 438
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
+ + Y K G ++L ++R+M+ + Y +I+LL KA + E +
Sbjct: 439 KDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKV 498
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKN 483
M E ++ G+KP + +Y L Y +G F+ E + + Y + L+
Sbjct: 499 MSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLR 558
Query: 484 AGNIEKAEEIFNHM 497
I+KA ++ M
Sbjct: 559 FNEIKKAAALYQEM 572
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 30/265 (11%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R+R+ RV M + ++ D + + +F I+ I + G P E
Sbjct: 944 RVRD----VRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDE 999
Query: 216 MTFHILIVAYLSAPVQGCLD----EACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL 271
T++ LI Y C D E S+ ++M LG +P+ + S+ A
Sbjct: 1000 ETYNTLITMY-------CRDHRPEEGLSLMHKMKSLG-LEPKRDTYRSMIAAF------- 1044
Query: 272 SKYYL-QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE 330
SK L QAE +F L ++G ++ + Y + + Y+ + D ++ L + M++AG E
Sbjct: 1045 SKQQLYDQAEELFEELRSNGYKLDRSFYH--LMMKMYRTSGDHQKAENLLEIMKEAGIEP 1102
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIF 390
+ ++ K G E+A++ L + T + ++AY K G+ +E
Sbjct: 1103 NTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKL 1162
Query: 391 REMQERLGSASVPAYHKIIELLCKA 415
EM+E A++ H+I +A
Sbjct: 1163 TEMKE----AAIEPDHRIWTCFIRA 1183
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 111/272 (40%), Gaps = 51/272 (18%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
++ D++ G P +T++ LI A + L EA +++ M + +P L
Sbjct: 322 ELLDEVGKFGLRPDIITYNTLISA---CSRESNLKEAIGVFSHM---ESNRCQPDLWT-- 373
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
+ A++S G + +AE +F L ++G Y+ L++ S + N +K R +
Sbjct: 374 YNAMISVYGRCG--FALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRD--IS 429
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEG---------------------------------- 346
+EM + GF + + +++ + K G
Sbjct: 430 EEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKA 489
Query: 347 -DVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVP 403
+E+A K +L D G+ Y + AYAK+G +++ E F M+E A
Sbjct: 490 SKIEEASKVMSEML--DAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHL 547
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKP 435
AY +++ + E + +L +E +E G P
Sbjct: 548 AYSVMLDFFLRFNEIKKAAALYQEMIEAGFTP 579
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 58/308 (18%), Positives = 121/308 (39%), Gaps = 39/308 (12%)
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
Q AE I NL ++ + +++ LI H+Y + ER + M + G E +
Sbjct: 806 QSAESIVENLRQRCSKMDRKVWNALI--HAYAFSGCYERARAIFNTMMREGPSPTVESVN 863
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
+L+ +G + + L + D I + + +EA+A+ G + +++ M+
Sbjct: 864 GLLQALIVDGRLSELYVVIQELQDMDLKISKSSILLMLEAFAQAGNLFEVQKVYNGMKAA 923
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
++ Y +I LLC+ + ++ E E G KP + + ++ +Y ++ +
Sbjct: 924 GYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNM 983
Query: 457 HLAFSECLEK----------------CR--------------------PNRTIYGIYLES 480
+ + + CR P R Y + +
Sbjct: 984 GVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAA 1043
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEI 540
++AEE+F + S+ ++ ++++ Y +SGD KAE + ++M E
Sbjct: 1044 FSKQQLYDQAEELFEELRSN-GYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEP 1102
Query: 541 ESAWMEKL 548
+A M L
Sbjct: 1103 NTATMHLL 1110
>gi|334188265|ref|NP_199684.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635750|sp|Q9FKC3.2|PP424_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g48730, chloroplastic; Flags: Precursor
gi|332008334|gb|AED95717.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 129/323 (39%), Gaps = 34/323 (10%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E+ +V+E + +Q WY+ + + KL +GK ++ K ++F ++IN+G V + +
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTA 190
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ AY + G D A ++ RM QP ++ L ++ L + + +
Sbjct: 191 LVSAYSRS---GRFDAAFTLLERMKSSHNCQPDVHTYSILIKSF------LQVFAFDKVQ 241
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER--ISLLKKEMQQAGFEEGKE---VL 335
+ ++ G+ Y+ LI D K + + + +Q G ++ K +
Sbjct: 242 DLLSDMRRQGIRPNTITYNTLI------DAYGKAKMFVEMESTLIQMLGEDDCKPDSWTM 295
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
S LR G +E E + + S F +++Y K G + K + MQ+
Sbjct: 296 NSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQK 355
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD- 454
S ++ Y+ +I+ +A + + E L + + P + +L Y D
Sbjct: 356 YHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADK 415
Query: 455 -------------RLHLAFSECL 464
RL L F CL
Sbjct: 416 IGGVLRFIENSDIRLDLVFFNCL 438
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 91/232 (39%), Gaps = 13/232 (5%)
Query: 314 ERISLLKKEMQQAGFEEGKEVL---------LSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
ERI+ L+ E FE +E L + ++ + K E A + + ++
Sbjct: 123 ERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCV 182
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELLCKAEETELTES 423
+ + + AY++ G F + + M+ V Y +I+ + + +
Sbjct: 183 VNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQD 242
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL--EKCRPNRTIYGIYLESL 481
L+ + G++P +Y L + Y M + + L + C+P+ L +
Sbjct: 243 LLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAF 302
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G IE E + S I N R+ NI+L +Y SG++ K + + M
Sbjct: 303 GGNGQIEMMENCYEKFQSS-GIEPNIRTFNILLDSYGKSGNYKKMSAVMEYM 353
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 99/230 (43%), Gaps = 18/230 (7%)
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVY 372
E+ L +EM G EV +++ ++ G + A R+ S N P +
Sbjct: 167 EKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSI 226
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE-TELTESLMKEFVET 431
++++ ++ F K ++ +M+ + + Y+ +I+ KA+ E+ +L++ E
Sbjct: 227 LIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGED 286
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-----CRPNRTIYGIYLESLKNAGN 486
KP + + G + ++ + C EK PN + I L+S +GN
Sbjct: 287 DCKP---DSWTMNSTLRAFGGNGQIEM-MENCYEKFQSSGIEPNIRTFNILLDSYGKSGN 342
Query: 487 IEKAEEIFNHM---HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+K + +M H TI + N+++ A+ +GD + E ++ LM
Sbjct: 343 YKKMSAVMEYMQKYHYSWTIV----TYNVVIDAFGRAGDLKQMEYLFRLM 388
>gi|297736301|emb|CBI24939.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 146/344 (42%), Gaps = 19/344 (5%)
Query: 157 IREN--ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
IREN E+ +++ + +QHWY TKL +GK ++ + +F+ ++++G P+
Sbjct: 103 IRENRYESALKIFGLLRKQHWYEPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPT 162
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY 274
+ L+ AY + G LD+A M + +P ++ L + + L ++
Sbjct: 163 LDVYTALVSAYGHS---GQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCCTT----LGRF 215
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
L E IF + G+E Y+ +I + D + SL EM ++G
Sbjct: 216 DL--IERIFTEMSYLGIECSTVTYNTIIDGYGKADMFELMESSL--TEMIESGTCLPDIF 271
Query: 335 LL-SVLRVCAKEGDVEDAEKTW--LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFR 391
L S + G +E EK + +L+ I T F + +Y K + K + +
Sbjct: 272 TLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPDIKT--FNILIRSYGKACMYEKMVSVME 329
Query: 392 EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
M++R S ++ ++ +IE+ + E E + G+KP +Y +L + Y G
Sbjct: 330 FMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAG 389
Query: 452 MHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
++ + + + L + AG++E+ E+F
Sbjct: 390 YLKKVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELF 433
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 119/290 (41%), Gaps = 26/290 (8%)
Query: 250 YQPRPSLHNSLFRAL--VSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
Y+PR + L L +P +QA +F +L+ GL D+Y+ L+ + +
Sbjct: 124 YEPRCQTYTKLLMMLGKCKQP--------EQASLLFEVMLSEGLRPTLDVYTALVSAYGH 175
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVL-RVCAKEGDVEDAEKTWLRLLESDNGIP 366
+DK ++ ++M+ + S+L + C G + E+ + + S GI
Sbjct: 176 SGQLDKAFCTV--EDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEM--SYLGIE 231
Query: 367 TPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELT 421
Y ++ Y K F EM E +P + I + + E
Sbjct: 232 CSTVTYNTIIDGYGKADMFELMESSLTEMIE--SGTCLPDIFTLNSFIWAYGNSGQIEKM 289
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLE 479
E EF G++P + ++ L Y M++++ ++ E ++K P + I +E
Sbjct: 290 EKWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKM-VSVMEFMKKRFYSPTIVTFNIVIE 348
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
GNIEK EE F M Q + N+ + ++SAY +G K + I
Sbjct: 349 MFGRVGNIEKMEEFFLKMK-HQGVKPNSITYCSLVSAYSKAGYLKKVDSI 397
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 145/347 (41%), Gaps = 28/347 (8%)
Query: 202 IFDDIINQGRVPSEMTF-HILIVAYLSAPVQGCLDEA---CSIYNRMIQLGGYQ--PRPS 255
+FD ++ R S + F H+L + + E+ S++NRMI+ + P P
Sbjct: 36 LFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTPDPC 95
Query: 256 LHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER 315
+ S+ + G L+ F +L SG + + + L+ + D +R
Sbjct: 96 TY-SILIGCFCRMG-----RLEHGFATFGLILKSGWRVNNIVINQLL-----KGLCDAKR 144
Query: 316 IS----LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP--- 368
+ +L K M + G ++L+ E E+A + L ++ G P
Sbjct: 145 LCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALE-LLHMMADSQGRSCPPNV 203
Query: 369 -AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
++ + + G+ K+ +F EM +R +V Y +I+ LCKA+ + E + ++
Sbjct: 204 VSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQ 263
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE-CLEKCRPNRTIYGIYLESLKNAGN 486
++ G+KP +Y L + YL++G + E +P+ YG L L N G
Sbjct: 264 MIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGR 323
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+A +F+ M + I N I++ Y + G + + +LM
Sbjct: 324 CREARFLFDSMIR-KGIKPNVAIYGILIHGYATKGALSEMHDLLNLM 369
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 148/376 (39%), Gaps = 22/376 (5%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M H + D L +Y+ + + R +FD +I +G P+ + ILI Y +
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYAT--- 355
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G L E + N M++ G P + N +F A K + +A IF+ + G
Sbjct: 356 KGALSEMHDLLNLMVE-NGLSPDHHIFNIIFTAYAKKA------MIDEAMHIFNKMKQQG 408
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
L Y LI +D + +M G V S++ E
Sbjct: 409 LSPDVVNYGALIDALCKLGRVDDAVLKF--NQMMNEGVAPNIFVFNSLVYGLCTVDKWEK 466
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKI---GEFMKSLEIFREMQERLGS-ASVPAYH 406
A++ + +L + GI P V+ + G+ MK+ + ++ ER+G+ V +Y
Sbjct: 467 AKEFYFEML--NQGI-RPDVVFFNTILCNLCTKGQVMKAQRLI-DLMERVGTRPGVISYT 522
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK 466
+I C + + + G+KP +Y L + Y G D + F E L
Sbjct: 523 TLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRN 582
Query: 467 -CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
P Y L L +A+E++ +M + N NIIL+ + +
Sbjct: 583 GITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK-QWNIWIYNIILNGLSKNNCVDE 641
Query: 526 AEKIYDLMCLKKYEIE 541
A K++ +C K +++E
Sbjct: 642 AFKLFQSLCSKDFQLE 657
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 130/353 (36%), Gaps = 88/353 (24%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T + D + K + + +F +I++G P T++ LI YLS G E +
Sbjct: 242 TTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSI---GKWKEVVRMLEE 298
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M G +P + SL L + ++A F+F +++ G++ IY I
Sbjct: 299 M-SAHGLKPDCYTYGSLLNYLCNNG------RCREARFLFDSMIRKGIKPNVAIYG--IL 349
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+H Y A +G + + ++E N
Sbjct: 350 IHGY-----------------------------------ATKGALSEMHDLLNLMVE--N 372
Query: 364 GIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
G+ ++ + AYAK +++ IF +M+++ S V Y +I+ LCK
Sbjct: 373 GLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCK------- 425
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLES 480
LG D L F++ + E PN ++ +
Sbjct: 426 ----------------------------LGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
L EKA+E + M +Q I + N IL + G +KA+++ DLM
Sbjct: 458 LCTVDKWEKAKEFYFEM-LNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509
>gi|293332227|ref|NP_001169164.1| uncharacterized protein LOC100383014 [Zea mays]
gi|223975267|gb|ACN31821.1| unknown [Zea mays]
Length = 469
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 147/360 (40%), Gaps = 49/360 (13%)
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG 269
G P+ +T+ +L+ + +A ++EA + RM + G S + +R+LV G
Sbjct: 40 GIRPNVVTYTMLVDGFCNASR---VEEAVCVLERMKEKG-----VSATEATYRSLVH--G 89
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
++A + + S + Y L++ S D +DKE + L KK M + G+
Sbjct: 90 AFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKND-MDKEAVELAKK-MSKRGYL 147
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEI 389
G V+ K + D + ++ + ++ ++++ + + K+ +
Sbjct: 148 LGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKY 207
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
F +M +SV +Y+ +I+ KA E E +K E+G P + ++ L N YL
Sbjct: 208 FSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLK 267
Query: 450 LG-MHDRLHL----------------------------------AFSECLE-KCRPNRTI 473
LG +HD FSE E RPN
Sbjct: 268 LGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQT 327
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
Y + + L +AG++ KA E+ N M D I + S N + ++ KA+K+++ M
Sbjct: 328 YNVLIHGLCSAGHVSKAIELLNKMKMDG-ITPDAYSFNAPILSFCRMRKIEKAQKLFNDM 386
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 150/374 (40%), Gaps = 16/374 (4%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M D L DY+ K + + R +FD + +G P T+ L+ Y +
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT--- 351
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G L E + + M++ G P ++ +F L+ K + QA +F + G
Sbjct: 352 KGALVEMHGLLDLMVR-NGIHP----NHYVFSILICAYAKQGK--VDQAMLVFSKMRQQG 404
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
L Y +I + ++ ++M G V S++ +
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYF--EQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKII 409
A++ L +L+ + T F ++++ K G ++S ++F ++ R+G + Y +I
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPDIITYSTLI 521
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCR 468
+ C A + + L+ V GMKP +Y L N Y + M D L L
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVS 581
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
P+ Y I L+ L A+E++ + T + + NIIL + +A +
Sbjct: 582 PDIITYNIILQGLFQTRRTAAAKELYVGITESGT-QLELSTYNIILHGLCKNNLTDEALR 640
Query: 529 IYDLMCLKKYEIES 542
++ +CL ++E+
Sbjct: 641 MFQNLCLTDLQLET 654
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 144/346 (41%), Gaps = 31/346 (8%)
Query: 200 RDIFDDIINQGRVPSEMTFHILI--VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
R +FD+++ +GR S + + VA S A S YNRM + G + P+L
Sbjct: 39 RHVFDELLRRGRGASIYGLNCALADVARHSPAA------AVSRYNRMARAGADEVTPNL- 91
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
+ L+ + L A N++ G + ++ L+ D + +
Sbjct: 92 -CTYGILIGSCCCAGRLDLGFAAL--GNVIKKGFRVDAIAFTPLLK-GLCADKRTSDAMD 147
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKM 374
++ + M Q G +L+ E ++A + L+++ D G P ++ +
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE-LLQMMPDDGGDCPPDVVSYTTVI 206
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
+ K G+ K+ + EM +R +V Y II LCKA+ + ++ V+ G+
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266
Query: 435 PLMPSYINLTNMYLN-------LGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNI 487
P +Y ++ + Y + +G ++H S+ +E P+ Y ++ L G
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMH---SDGVE---PDVVTYNSLMDYLCKNGRC 320
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+A ++F+ M + + + + +L Y + G V+ + DLM
Sbjct: 321 TEARKMFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 150/361 (41%), Gaps = 27/361 (7%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALA-TKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
RIR+ E G + ++W+ + + A + L + + R F++ + +++ + P+
Sbjct: 69 RIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPT 128
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG----- 269
I+I AY + G +++A +Y +++ Y P NSL LV K G
Sbjct: 129 REAMSIVIQAYSDS---GLVEKALELYYFVLKTYTYFPDVIACNSLLNMLV-KLGRIEIA 184
Query: 270 ---------GLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
GL K L++ + + G Y+ LI Y D E + L
Sbjct: 185 RKFTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLI--DGYCKKGDMEMANGL 242
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAY 377
E++ GF E +++ K+GD + ++ + + + G+ VY ++A
Sbjct: 243 FIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEM--NSRGLTVNVQVYNTIIDAR 300
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
K G +K++E M E + Y+ +I C+ + + L+++ + G+ P
Sbjct: 301 YKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNK 360
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
SY L + Y G +DR E E+ +P+ YG + L AG ++ A I
Sbjct: 361 FSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREK 420
Query: 497 M 497
M
Sbjct: 421 M 421
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 149/345 (43%), Gaps = 31/345 (8%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E ++V E MM FA + + + K R+++ ++ G P +++HI
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGF-ARSNNMEKAREVYQHMVESGYKPDNVSYHI 191
Query: 221 LIVAYLSAPVQGCLDEACSIYNRM-IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQA 279
LI G LDE+ I + M ++ GY P ++L L L++A
Sbjct: 192 LIHGLAKI---GKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTG------ELEKA 242
Query: 280 EFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVL 339
+F ++L +G + K Y+ LI + + + R L ++M QA S++
Sbjct: 243 LEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQAR--ELFEKMTQACIPPDAVAYNSLI 300
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGI-PT-PAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
K G +++AEK + R + G+ PT F ++ + K+G+ ++ E+ EM +
Sbjct: 301 AGYCKRGSMDEAEKLY-REMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKG 359
Query: 398 GSASVPAYHKIIELLCKAEETELTESL-------MKEFVETGMKPLMPSYINLTNMYLNL 450
+A Y +I L +A T+L E+L K+F+ + P+ S ++
Sbjct: 360 LAADTCTYRILIAGLSRA--TKLDEALEVYKQMREKKFL---LDPV--SCVSFVGGLCKT 412
Query: 451 GMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
G D+ + F + PN + I ESL G +E A+++
Sbjct: 413 GNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 457
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 85/420 (20%), Positives = 168/420 (40%), Gaps = 35/420 (8%)
Query: 178 FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEA 237
+DF + + + K A+ ++F+ + ++ VPS +T+++LI + +A G +A
Sbjct: 13 YDFVVQS-----LAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNA---GEFGKA 64
Query: 238 CSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI 297
++ M + +P +N+L L S + A + + +
Sbjct: 65 LDLFQSMKREKRVEPDRWTYNTLISGLCSSGN------TEGARKLLSEMRDKNIAANVFT 118
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
YS +I S E + +EM AG V++ A+ ++E A + +
Sbjct: 119 YSSII--KSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQH 176
Query: 358 LLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS--ASVPAYHKIIELLCKA 415
++ES ++ + AKIG+ +SL+I EM R +V + +I LC+
Sbjct: 177 MVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRT 236
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECLEKC-RPNR 471
E E + +E G KP +Y T + L +++ A F + + C P+
Sbjct: 237 GELEKALEVFGSMLEAGCKPNKYTY---TTLIAGLCRAEKVIQARELFEKMTQACIPPDA 293
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
Y + G++++AE+++ M + + N ++ + G +A ++
Sbjct: 294 VAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVA 353
Query: 532 LMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIGL-------LLGGLC 584
M K ++ L LS + K +L + + RE L +GGLC
Sbjct: 354 EMGTKGLAADTCTYRILIAGLS---RATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLC 410
>gi|255654046|gb|ACU25388.1| hypothetical protein [Trebouxia angustilobata]
Length = 212
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 80/195 (41%), Gaps = 44/195 (22%)
Query: 571 QRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEWLH--PSFK- 627
Q+E L G++LG +E+ R + ++F E S H +LYD + ++ P K
Sbjct: 11 QKEVLFGVILGDAHLETQNNRITYRVKF---EQSIKHKAYIEHLYDVFKNYVKTSPQLKL 67
Query: 628 ---------------------------------FWPKGRLVIPKLIHRWLTPRALAYWFM 654
F+ + VIPKLIHRWLTPRALAYW+M
Sbjct: 68 VTYKNSQTNGQKQSINIRFATISSSTFTFFGKQFYKDKKKVIPKLIHRWLTPRALAYWYM 127
Query: 655 YGGHRTSV---GDILLKLKVSSEGIALVFKTLKAR-SLDC-RVKKKGRVFWIGFLGSNST 709
G S G +L S + L+ L + +L C K+K + I G
Sbjct: 128 DDGSMKSTQSKGVLLNTQAFSHSEVQLLCNVLTEKFNLYCWPRKQKKNTYQIYISGKTYE 187
Query: 710 LFWKLIEPYVLDELK 724
I P+++ +++
Sbjct: 188 TLRNCIYPFIIPDMQ 202
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 30/303 (9%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F+++ N+ V H L A G +DEA S++ RM Y P+++ +
Sbjct: 249 VFEEMPNRNEVSYNQLIHGLCEA-------GRIDEAVSLFVRMKDDCCY---PNVYT--Y 296
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
AL+ GL + + +A + +L L Y+ LI ++D L
Sbjct: 297 TALIK---GLCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAY--RLLS 351
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAK 379
M++ G + + K VE+A + + L E G+ +Y ++ Y K
Sbjct: 352 LMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTE--EGVSANVIMYSVLIDGYCK 409
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
+G+ ++ +F +M + S + ++ +I LC A + SL + V+ G+KP + +
Sbjct: 410 VGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYT 469
Query: 440 YINLTNMYLNLGMHDRLHLAFSECLEKC-----RPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ L L G D H +CL+K +P Y ++E +AG +++AE++
Sbjct: 470 FNILIGRMLKQGDFDDAH----KCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMM 525
Query: 495 NHM 497
M
Sbjct: 526 VQM 528
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 188 DYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL 247
D++ K + + R +FD + +G + + + +LI Y G +DEA ++ +M+
Sbjct: 370 DFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKV---GKVDEAGCLFEKMLS- 425
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
P N+L L S L++A +F ++ GL+ ++ LI
Sbjct: 426 KNCSPNAYTFNALIHGLCSAGN------LKEALSLFDQMVKMGLKPTVYTFNILIGRMLK 479
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
Q + D L K M +G + + + V G V++AE +++ E G+P
Sbjct: 480 QGDFDDAHKCLQK--MMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKE--EGVPP 535
Query: 368 PAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
F Y ++AY K+G + ++ + M + P++H + L+
Sbjct: 536 DDFTYTSLIKAYGKLGLTYSAFDVLKSM---FDADCEPSHHTFLSLI 579
Score = 45.8 bits (107), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 20/235 (8%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+FD ++ G P+ TF+ILI L QG D+A +M+ G +P +N+
Sbjct: 454 LFDQMVKMGLKPTVYTFNILIGRMLK---QGDFDDAHKCLQKMMS-SGEKPVARTYNAFI 509
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
S +Q+AE + + G+ Y+ LI + + + +LK
Sbjct: 510 EVYCSAGK------VQEAEDMMVQMKEEGVPPDDFTYTSLIKAYG-KLGLTYSAFDVLKS 562
Query: 322 EMQQAGFEEGKEVLLSVLR-VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
M A E LS+++ + K VE + +T + + + +P K+
Sbjct: 563 -MFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNM-------WKM 614
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
EF +E+F EM++ + Y K+I +CK E + L+ + + G+ P
Sbjct: 615 MEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISP 669
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 121/292 (41%), Gaps = 14/292 (4%)
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
G P +N L RAL ++ L++A + ++ +G Y+ L+
Sbjct: 5 GVAPNVYTYNILVRALCARG------RLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRA 58
Query: 309 DNID-KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+D ER+ L +E A + S++ K G +E A K + ++
Sbjct: 59 GELDGAERVVSLMREEGNA--KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDV 116
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
++ + Y K+G +SL +F EM +R V + +I CKA E +L+ +
Sbjct: 117 VSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 176
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLESLKNAG 485
E G++ ++ L + + G D LA E + KC +P+ Y + G
Sbjct: 177 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEE-MRKCGIQPSVVCYNALINGYCKLG 235
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
++ A E+ M + + + + + + I+S Y G+ A ++ M LKK
Sbjct: 236 RMDLARELIREMEAKR-VKPDVVTYSTIISGYCKVGNLDSAFQLNQKM-LKK 285
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 142/354 (40%), Gaps = 55/354 (15%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
T +A C R E + RV M ++ + + + + + K + R +FD+++
Sbjct: 50 TLVAAFC-RAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV 108
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
+G P ++++ L+ Y GCL E+ ++++ M Q G P SL A K
Sbjct: 109 REGLAPDVVSYNTLLSGYCKV---GCLHESLAVFSEMTQRG-LVPDVVTFTSLIHA-TCK 163
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
G L +QA + + GL + + ++ LI + +D +++ +EM++ G
Sbjct: 164 AGNL-----EQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV--EEMRKCG 216
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSL 387
+ SV VC + + Y K+G +
Sbjct: 217 IQP------SV--VC---------------------------YNALINGYCKLGRMDLAR 241
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
E+ REM+ + V Y II CK + L ++ ++ G ++P I +++
Sbjct: 242 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG---VLPDAITYSSLI 298
Query: 448 LNLGMHDRLHLA---FSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
L RL+ A F L+ +P+ Y ++ GN+EKA + + M
Sbjct: 299 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 352
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/358 (19%), Positives = 158/358 (44%), Gaps = 18/358 (5%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
+ + + + D M K++ D++ +++++G P+ +T+ LI + + G L +A
Sbjct: 196 NVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTV---GQLKDAI 252
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
++N+MI L +P N L K G + ++ + +F ++ G++ Y
Sbjct: 253 DLFNKMI-LENIKPDVYTFNILVDGF-CKDGKM-----KEGKTVFAMMMKQGIKPNVVTY 305
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
L+ + ++K + L M Q G + ++ K V++A + +
Sbjct: 306 CSLMDGYCLVKEVNKAKSILY--TMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLF-KE 362
Query: 359 LESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
+ + IP + ++ K+G+ +L++ EM +R + Y I++ LCK +
Sbjct: 363 MHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQ 422
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI--YG 475
+ +L+ + + G++P M +Y L + G + H F + L K N T+ Y
Sbjct: 423 VDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGY-NITVNTYT 481
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ + N G ++A + + M + I + + II+ + + KAEK+ +++
Sbjct: 482 VMIHGFCNKGLFDEALALLSKMKDNSCIP-DAVTYEIIIRSLFDKDENDKAEKLREMI 538
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 2/157 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ K+GE +L++ R + L +V Y II+ +CK + L E V G+
Sbjct: 169 IHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGI 228
Query: 434 KPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
P + +Y L + + +G + D + L LE +P+ + I ++ G +++ +
Sbjct: 229 SPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKT 288
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
+F M Q I N + ++ Y + KA+ I
Sbjct: 289 VFAMMMK-QGIKPNVVTYCSLMDGYCLVKEVNKAKSI 324
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
K+G +++ + + +++ + M+ Y + E K+ I M +R + +
Sbjct: 278 CKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDI 337
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG----------- 451
+Y+ +I+ CK ++ + +L KE + P + +Y +L + LG
Sbjct: 338 QSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDE 397
Query: 452 MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
MHDR P+ Y L++L ++KA + + DQ I N +
Sbjct: 398 MHDR----------GVPPDIITYSSILDALCKNHQVDKAIALLTKL-KDQGIRPNMYTYT 446
Query: 512 IILSAYLSSGDFVKAEKIYDLMCLKKYEI 540
I++ G A I++ + +K Y I
Sbjct: 447 ILIDGLCKGGRLEDAHNIFEDLLVKGYNI 475
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFRE 392
L+SVL CA G + E W+ + +GI F+ ++ Y+K G+ K+LE+FR
Sbjct: 307 LVSVLSACASLGSLSQGE--WVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRA 364
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
+R V ++ II L + + E V G KP ++I + + ++GM
Sbjct: 365 TSKR----DVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGM 420
Query: 453 HDRLHLAFSECLEKCRPNRTI--YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC 510
D+ F R TI YG ++ L G IE+AEE+ N + +D+
Sbjct: 421 LDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEA-------- 472
Query: 511 NIILSAYLSS----GDFVKAEKIYD 531
+I+L + L + G +AE+I +
Sbjct: 473 SILLESLLGACKRFGQLEQAERIAN 497
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 141/354 (39%), Gaps = 53/354 (14%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L ++ + RK + ++++ + G P +T+H L++ Y V GC+DEA +Y M
Sbjct: 392 LIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC---VNGCMDEAVKLYTEMP 448
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
G+ P + +L + G ++K +A + + +G+ Y+ LI
Sbjct: 449 G-KGFTPNVVTYTTLMK------GHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLI--- 498
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
L V RVC E E L+ E++ +
Sbjct: 499 ---------------------------NGLCVVGRVC------EVGE--MLKRFETEGFV 523
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
PT A Y + + K G + ++++M + ++ Y I+ CK +L
Sbjct: 524 PT-AMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALK 582
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLK 482
++ + G++P + +Y +L + G M L + + PN ++Y ++ K
Sbjct: 583 MLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYK 642
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
N +E+A + M + I ++T + ++ + G+ A K+Y M K
Sbjct: 643 NLKMMEEALRFYEKMIK-EGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAK 695
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 147/363 (40%), Gaps = 25/363 (6%)
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
+ LAT L +R+ K DIF++ + G VP+++T+ +LI +GC +E
Sbjct: 279 KMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLI--------RGCTEE 330
Query: 237 ACS--IYN--RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLE 292
Y R ++ G P + N + + L L+ + A +F + SG+
Sbjct: 331 GMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL------LNDKLWKDAVSLFKEMADSGI- 383
Query: 293 IQKDIYSGLIWLH-SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
D ++ I +H Q +E ++L +K M + G + S+L G +++A
Sbjct: 384 --PDAFTYNILIHWLCQRRKIREALNLWEK-MNETGVKPYIVTYHSLLLCYCVNGCMDEA 440
Query: 352 EKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
K + + + M+ + F K+ + EM++ S + Y+ +I
Sbjct: 441 VKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLING 500
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE-CLEKCRPN 470
LC ++K F G P +Y ++ N ++ GM + + C + PN
Sbjct: 501 LCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPN 560
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
Y +++ + A ++ N + + + + + N ++ + G+ A ++
Sbjct: 561 IVTYTSFIDGYCKTSCCDLALKMLNDVRC-KGLRPDIAAYNSLIYGFCQEGNMSHALQVL 619
Query: 531 DLM 533
LM
Sbjct: 620 VLM 622
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 116/283 (40%), Gaps = 20/283 (7%)
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
+G VP+ MT++ +I ++ A G + A ++Y +M G P + S
Sbjct: 519 TEGFVPTAMTYNSIINGFIKA---GMMGSAFAVYQQMCA-KGIPPNIVTYTSFID----- 569
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
G A + +++ GL Y+ LI+ + N+ L+ M + G
Sbjct: 570 -GYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVL--MLKDG 626
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSL 387
V S + +E+A + + ++++ + T + ++ ++K G +L
Sbjct: 627 LLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFAL 686
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
+++ EM + + + LC+ + + L+ E ++P + Y L N Y
Sbjct: 687 KLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGY 746
Query: 448 LNLGMHDRLHLAF---SECLE-KCRPNRTIYGIYLESLKNAGN 486
L G +L AF E LE K P+ T Y I L +K+ G+
Sbjct: 747 LRNG---KLQEAFRLHDEMLERKIMPDDTTYDI-LVGMKSLGS 785
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 154/389 (39%), Gaps = 44/389 (11%)
Query: 155 MRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
++I ENE GF+ ++Y + AL + D K + ++N+G V
Sbjct: 110 LKILENELGFKP-----DTNFY--NIALNALVED-----NKLKLVEMLHSKMVNEGIVLD 157
Query: 215 EMTFHILIVAYLSA----PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGG 270
TF++LI A A P L+E + G +P +L + + + G
Sbjct: 158 VSTFNVLIKALCKAHQLRPAILMLEEMAN--------HGLKPDEITFTTLMQGFIEE-GD 208
Query: 271 LSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE 330
L+ + + + + L + + ++ + ++ + E E+ + GF
Sbjct: 209 LNGALKMKKQMLGYGCLLTNVSVK-------VLVNGFCKEGRVEEALRFVLEVSEEGFSP 261
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLE 388
+ S++ + G+V DA ++E G + Y + K+GEF K++E
Sbjct: 262 DQVTFNSLVNGFCRIGNVNDALDIVDFMIEK--GFDPDVYTYNSLISGMCKLGEFEKAIE 319
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
I ++M R S + Y+ +I LCK E E L + V G L+P +
Sbjct: 320 ILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKG---LLPDVCTFNTLIQ 376
Query: 449 NLGMHDRLHLA---FSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
L + +A F E K C+P+ Y I ++SL +++A + M S
Sbjct: 377 GLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGC-A 435
Query: 505 VNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
N N ++ S AE+I+D M
Sbjct: 436 RNAVVYNTLIDGLCKSRRIEDAEEIFDQM 464
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 136/344 (39%), Gaps = 49/344 (14%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
RI + ++M+++ + D L M K +F K +I +I + P+
Sbjct: 275 RIGNVNDALDIVDFMIEK-GFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNT 333
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+T++ LI SA + EA + R++ G P N+L + L LSK
Sbjct: 334 VTYNTLI----SALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLC-----LSKNQ 384
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
E +F + G + + YS LI Y+ + KE + LLK EM+ +G V
Sbjct: 385 DIAME-MFEEMKNKGCKPDEFTYSILIDSLCYERRL-KEALMLLK-EMESSGCARNAVVY 441
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
+++ K +EDAE EIF +M+
Sbjct: 442 NTLIDGLCKSRRIEDAE-----------------------------------EIFDQMEL 466
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
S S Y+ +I+ LCK + E LM + + G+KP +Y +L + +G ++
Sbjct: 467 LGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEK 526
Query: 456 L-HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
+ + C P+ YG + L AG ++ A ++ +
Sbjct: 527 AGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQ 570
>gi|297736801|emb|CBI26002.3| unnamed protein product [Vitis vinifera]
Length = 469
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 142/336 (42%), Gaps = 21/336 (6%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
V+E + +Q +Y+ KL +GK + + ++FD ++ +G P+ + L+
Sbjct: 127 ALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTELYTALL 186
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
+Y + + +DEA SI N+M L QP +++L +A V S++ L ++ +
Sbjct: 187 ASYCRSNL---IDEAFSILNQMKTLPRCQPDVFTYSTLLKACVD----ASRFELVESLYE 239
Query: 283 FHNL--LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
++ +T Q + SG + D ++K +L ++ + + ++L
Sbjct: 240 EMDVRSITPNTVTQNIVLSGYGKAGKF-DEMEK----VLSGMLESTSSKPDVWTMNTILS 294
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
+ +G +E EK + + T F + AY K + K + M++
Sbjct: 295 LFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR----- 455
+ Y+ +IE + + E + GMK ++ L Y N G+ +
Sbjct: 355 TTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKAEDLI 414
Query: 456 -LHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEK 489
+ F+ +K C+P+ T Y I +E+ K G +K
Sbjct: 415 EMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGMNDK 450
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 382 EFMKSLEIFREMQER-LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
+++++LE+F ++E+ Y K++ LL K+ + L VE G +P Y
Sbjct: 123 QWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTELY 182
Query: 441 INLTNMYLNLGMHDRLHLAFS-----ECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
L Y + D AFS + L +C+P+ Y L++ +A E E ++
Sbjct: 183 TALLASYCRSNLIDE---AFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYE 239
Query: 496 HMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSL 554
M ++I NT + NI+LS Y +G F + EK+ M W ++ +LSL
Sbjct: 240 EMDV-RSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWT--MNTILSL 295
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 149/378 (39%), Gaps = 26/378 (6%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M H D L DY+ K+ K + R +FD +I +G P + I++ Y +
Sbjct: 300 MSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYAT--- 356
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G L E S + M+ G P + N +F A K + +A IF+ + G
Sbjct: 357 KGALSEMHSFLDLMVG-NGISPNHYIFNIVFCAFAKKA------MIGEAMDIFNKMRQQG 409
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS-VLRVCAKEGDVE 349
L Y+ LI +D + +M G V S V +C ++
Sbjct: 410 LSPNVVNYATLIDALCKLGRVDDAELKF--NQMINEGVAPNIVVFTSLVYGLCT----ID 463
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKI---GEFMKSLEIFREMQERLGS-ASVPAY 405
EK E N P V+ + G MK+ + ++ ER+G+ + +Y
Sbjct: 464 KWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLI-DLMERVGTRPDIISY 522
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE 465
+ +I C +T+ L+ + G+KP +Y L + Y G D + F E L
Sbjct: 523 NALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLS 582
Query: 466 K-CRPNRTIYGIYLESLKNAGNIEKAEEIF-NHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
P Y L L +A+E++ N + S + + T NIIL+ +
Sbjct: 583 NGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTY--NIILNGLSKNNCV 640
Query: 524 VKAEKIYDLMCLKKYEIE 541
+A K++ +C K +++
Sbjct: 641 DEALKMFQSLCSKDLQVD 658
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G+ K+ +F +M ++ +V Y +I+ LCKA+ + E + ++ ++ G++P + +Y
Sbjct: 218 GQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTY 277
Query: 441 INLTNMYLNLGMHDRLHLAFSE-CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
L + YL++G + E P+ YG+ L+ L G +A ++F+ M
Sbjct: 278 TCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIR 337
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ I + IIL Y + G + DLM
Sbjct: 338 -KGIKPDVSIYGIILHGYATKGALSEMHSFLDLM 370
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 148/348 (42%), Gaps = 26/348 (7%)
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
E + K ++F D+ +QG P+ +T+ I+I A V +D A ++ +MI G +P
Sbjct: 217 EGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQV---VDRAEGVFQQMID-KGVRP 272
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+ L G LS ++ + + GLE Y L+ +
Sbjct: 273 NIVTYTCLIH------GYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCT 326
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
+ R L M + G + + +L A +G + + ++L L+ NGI +++
Sbjct: 327 EAR--KLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMH-SFLDLMVG-NGISPNHYIF 382
Query: 373 KME--AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
+ A+AK ++++IF +M+++ S +V Y +I+ LCK + E + +
Sbjct: 383 NIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMIN 442
Query: 431 TGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEK 489
G+ P + + +L + ++ F E + + PN + + +L G + K
Sbjct: 443 EGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMK 502
Query: 490 AEEIFNHMHSDQTIGVNTR----SCNIILSAYLSSGDFVKAEKIYDLM 533
A+ + + M V TR S N ++ + G +A K+ D+M
Sbjct: 503 AQRLIDLMER-----VGTRPDIISYNALIRGHCLVGKTDEASKLLDIM 545
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 7/215 (3%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAK 379
+MQ+ G+E + +++RV A+EG + DA + L ++S N +Y ++ + K
Sbjct: 228 QMQEIGYEANVHLFTTLVRVFAREGRI-DAALSLLDEMKS-NSFTADLVLYNVCIDCFGK 285
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
+G+ + + F EM+ + Y +I +LCKA + L +E P + +
Sbjct: 286 VGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYA 345
Query: 440 YINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
Y + Y + G D + K C P+ Y L L G +E+A I + M
Sbjct: 346 YNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR 405
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
D + T NI++ +G+ A K+ D M
Sbjct: 406 QDAAPNLTTY--NILIDMLCKAGELEAALKVQDTM 438
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 146/346 (42%), Gaps = 22/346 (6%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + K + + D + G P+ MT +I+I A LDEACSI+
Sbjct: 418 LIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQK---LDEACSIF---- 470
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
LG S + F +L+ G + + A ++ +L S +Y+ LI
Sbjct: 471 -LGLDHKVCSPDSRTFCSLIDGLGRRGR--VDDAYSLYEKMLDSDQIPNVVVYTSLI--Q 525
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
++ KE + KEM G +L S + K G+VE + +++ +
Sbjct: 526 NFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKG-RALFEEIKAQGLV 584
Query: 366 P-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
P ++ + K G ++ ++F EM+E+ V AY+ +I+ CK+ + + L
Sbjct: 585 PDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQL 644
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKN 483
++E G++P + +Y ++ + + D ++ F E N IY ++
Sbjct: 645 LEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGK 704
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
G I++A I + + + N+ + N +L A VKAE+I
Sbjct: 705 VGRIDEAYLILEELMQ-KGLTPNSYTWNCLLDA------LVKAEEI 743
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 135/364 (37%), Gaps = 45/364 (12%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E G ++Y+ M+ + D L D + K + K R +F++I QG VP ++ I
Sbjct: 534 EDGHKIYKEMVHRGCSP-DLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSI 592
Query: 221 LIVAYLSAPV--------------------------------QGCLDEACSIYNRMIQLG 248
LI + A G +D+A + M +
Sbjct: 593 LIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEM-KTK 651
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
G QP + S+ GL+K L +A +F + G+++ IYS LI
Sbjct: 652 GLQPTVVTYGSVV-------DGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGK 704
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
ID+ + L +E+ Q G +L K ++++A+ + +
Sbjct: 705 VGRIDEAYLIL--EELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNA 762
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
+ + I +F K+ ++EMQ++ + Y +I L KA L
Sbjct: 763 MTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDR 822
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGN 486
F +G P Y + + ++ F E L+ CR N + L++L A
Sbjct: 823 FKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADC 882
Query: 487 IEKA 490
+E+A
Sbjct: 883 LEQA 886
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 122/312 (39%), Gaps = 29/312 (9%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
PS TF I+ Y SA G D+A ++ M + G +Q S N++ L
Sbjct: 118 PSPKTFAIVAERYASA---GKPDKAVKLFLNMHEHGCFQDLASF-NTILDVLCKSKRVEK 173
Query: 273 KYYLQQA-------EFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
Y L +A + + +N++ +G + K L L KEM +
Sbjct: 174 AYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKTLEVL----------------KEMVE 217
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMK 385
G ++L+ + G + A + +L + + D I + + + GE +
Sbjct: 218 RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKR 277
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+ +F EM SV Y+ +I++LCK + E + +E V G +P + +Y L
Sbjct: 278 ARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIR 337
Query: 446 MYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
+ G R E C PN Y + + +EKA +F M S +
Sbjct: 338 GLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLP 397
Query: 505 VNTRSCNIILSA 516
N + NI++S
Sbjct: 398 -NLDTYNILISG 408
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 154/376 (40%), Gaps = 63/376 (16%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
+++D +I +G PS ++++ +I+ + +GC+D+A + N +I+ G +P + L
Sbjct: 452 NLWDKMIGKGITPSLVSYNHMILGHCK---KGCMDDAHEVMNGIIE-SGLKPNAITYTIL 507
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD-----IYSGLIWLHSYQDNIDKER 315
G K + A +F ++ +G+ + D I +GL + + DK
Sbjct: 508 ME------GSFKKGDCEHAFNMFDQMVAAGI-VPTDYTFNSIINGLCKVGRVSEARDK-- 558
Query: 316 ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME 375
L ++Q+ F ++ KEG ++ AE + + S+ + +
Sbjct: 559 ---LNTFIKQS-FIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLIN 614
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ K + +L++ +M+ + + Y +I CK ++ E + +E G+ P
Sbjct: 615 GFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTP 674
Query: 436 -------LMPSYINLTNMYLNLGMH-------------------------DRLHLA---F 460
++ +Y NL NM L +H +L A +
Sbjct: 675 NTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLY 734
Query: 461 SECLEKCR---PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
SE L CR P+ +Y + + L N G +E A +I M + I N +++ +
Sbjct: 735 SEML--CRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNN-ITPTVLLYNTLIAGH 791
Query: 518 LSSGDFVKAEKIYDLM 533
G+ +A +++D M
Sbjct: 792 FKEGNLQEAFRLHDEM 807
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 144/365 (39%), Gaps = 28/365 (7%)
Query: 141 WLRQEDGTYLAV--HCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAK 198
W+ E GTY AV C+R+ R+ + M+ + A+AT L
Sbjct: 288 WVPSE-GTYAAVIGACVRLGNFGEALRLKDEMVDSR-VPVNVAVATSLIKGYCVRGDVNS 345
Query: 199 CRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN 258
+FD+++ G P+ F +LI + S G +++A +Y RM + G QP + N
Sbjct: 346 ALRLFDEVVEVGVTPNVAIFSVLI-EWCSK--IGNVEKANELYTRM-KCMGLQPTVFILN 401
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
L + G + L+ A + + +G+ L+WL E +L
Sbjct: 402 FLLK------GFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKV--NEACNL 453
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEA 376
K + + +L C K+G ++DA + ++ES G+ A Y ME
Sbjct: 454 WDKMIGKGITPSLVSYNHMILGHC-KKGCMDDAHEVMNGIIES--GLKPNAITYTILMEG 510
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTESLMKEFVETGM 433
K G+ + +F +M + + VP ++ II LCK + F++
Sbjct: 511 SFKKGDCEHAFNMFDQM---VAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSF 567
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSE-CLEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
P +Y + + Y+ G D + E C + PN Y + + ++ A +
Sbjct: 568 IPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALK 627
Query: 493 IFNHM 497
+ + M
Sbjct: 628 MHDDM 632
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 129/327 (39%), Gaps = 26/327 (7%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E F +++ M+ D+ + + + K + ++ RD + I Q +P+ MT++
Sbjct: 518 EHAFNMFDQMVAAGIVPTDYTF-NSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNC 576
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
+I Y+ +G +D A S+Y M + P + SL G K
Sbjct: 577 IIDGYVK---EGAIDSAESVYREMCR-SEISPNVITYTSLIN-------GFCKSNKMDLA 625
Query: 281 FIFH-NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVL 339
H ++ GLE+ +Y+ LI + D E ++ + G V ++
Sbjct: 626 LKMHDDMKRKGLELDITVYATLI--AGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMI 683
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERL 397
++E A ++ +N IP +Y ++ K G+ +L+++ EM R
Sbjct: 684 SAYRNLNNMEAALNLHKEMI--NNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRG 741
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL---NLGMHD 454
+ Y+ +I LC + E ++KE + P + Y L + NL
Sbjct: 742 IVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAF 801
Query: 455 RLHLAFSECLEK-CRPNRTIYGIYLES 480
RLH E L+K P+ T Y I +
Sbjct: 802 RLH---DEMLDKGLVPDDTTYDILVNG 825
>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g19290-like [Cucumis
sativus]
Length = 885
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 135/332 (40%), Gaps = 28/332 (8%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
++ + + ++++ +G PS + F+ +I AY +A ++ + A Y M++ G P
Sbjct: 447 RYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLE---ERAFYAYGIMVKFG-LTPSS 502
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
S +SL +LV K L +A ++++ G + ++ + L Y
Sbjct: 503 STCSSLLISLVRKGS------LDEAWIALYDMIDKGFPVTNMAFT--VLLDGYFRIGAVN 554
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK- 373
L EM+ G + + G + DA + +L G FVY
Sbjct: 555 MAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRK--GFVPNNFVYNS 612
Query: 374 -MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
+ + K+G+ ++L++ REM +R + + II LCK +L + G
Sbjct: 613 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 672
Query: 433 MKPLMPSYINLTNMY---LNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEK 489
+ P + +Y L + Y ++G D L + S+ P+ T Y I + I +
Sbjct: 673 LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSD--SGWEPDLTTYNIRIHGYCTVRKINR 730
Query: 490 AEEIFNHMHS----DQTIGVNT---RSCNIIL 514
A I + S T+ NT CN+IL
Sbjct: 731 AVMILEELISVGIVPNTVTYNTMINAVCNVIL 762
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
S+L K +V A++ + + D IP + + +E + K K+ EIFREM +
Sbjct: 151 SLLSALCKSKNVVKAQEIFNGM--KDQFIPDSKTYSILLEGWGKAPNLPKAREIFREMVD 208
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
+ Y ++++LCKA + ++KE + KP Y L + Y G+ +R
Sbjct: 209 MGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTY---GIENR 265
Query: 456 LHLAFSECLEKCR----PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
+ A L+ R + +Y + + ++ A + N M + I N+R+CN
Sbjct: 266 IEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDC-KGIRPNSRTCN 324
Query: 512 IILSAYLSSGDFVKAEKIYDLM 533
IIL++ +S GD +A +++ M
Sbjct: 325 IILNSLISCGDTDEAFRVFRRM 346
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/418 (18%), Positives = 179/418 (42%), Gaps = 31/418 (7%)
Query: 82 FDVGTAGSEMRHLGEPVVEVIELEELPEQWRRAKLAWLCKELPSHKGGTLVRILNAQKKW 141
F+ T E H EP +E+I+L + R+ LAW L+ ++ +
Sbjct: 1165 FNWATNLEEFGHSPEPYMEMIDLAG---KVRQFDLAW-----------QLIDLMKTRNVE 1210
Query: 142 LRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRD 201
+ E T L ++ + M+ + + D + + + K+R+ + +
Sbjct: 1211 IPVETFTILVRRYVKAGLAAEAVHAFN-RMEDYGCKPDKIAFSVVISSLSKKRRAIEAQS 1269
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
FD + ++ P + + L+ + A G + EA ++ M ++ G P ++ +
Sbjct: 1270 FFDSLKDRFE-PDVVVYTSLVHGWCRA---GNISEAERVFGEM-KMAGIXPNVYTYSIVI 1324
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
AL + G +++ A +F ++ G + ++ L+ +H E++ +
Sbjct: 1325 DALC-RSGQITR-----AHDVFSEMIDVGCDPNAITFNNLMRVHVKAGR--TEKVLQVYN 1376
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
+M++ G ++ ++ ++E+A K L ++ + +F +K+G
Sbjct: 1377 QMKRLGCPPDAITYNFLIESHCRDDNLEEAVKI-LNSVKKGCNLNASSFNPIFGCISKLG 1435
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ + +F +M++ + Y+ ++ + + T++ L KE E ++P +Y
Sbjct: 1436 DVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYR 1495
Query: 442 NLTNMYLNLGMHDRLHLAFSECLE-KC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
L + + +G + + F E +E KC RP+ +Y + L+ L+ AG ++K EE+ M
Sbjct: 1496 VLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKM 1553
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 140/359 (38%), Gaps = 24/359 (6%)
Query: 185 KLADYMGKERKFAKCRDIFDDIINQG-RVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
++ D GK R+F + D + + +P E TF IL+ Y+ A G EA +NR
Sbjct: 1183 EMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVE-TFTILVRRYVKA---GLAAEAVHAFNR 1238
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M G + + F ++S LSK F + L E +Y+ L+
Sbjct: 1239 MEDYGCKPDKIA-----FSVVIS---SLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVH 1290
Query: 304 LHSYQDNI-DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
NI + ER+ EM+ AG V+ + G + A + +++
Sbjct: 1291 GWCRAGNISEAERVF---GEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVG 1347
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
F M + K G K L+++ +M+ Y+ +IE C+ + E
Sbjct: 1348 CDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAV 1407
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESL 481
++ V+ G S+ + LG + H F++ + KCRPN Y I +
Sbjct: 1408 KILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMF 1466
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM----CLK 536
+ + + ++ M ++ I N + +++S + G + A + M CL+
Sbjct: 1467 ADKKSTDMVLKLRKEMDENE-IEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLR 1524
>gi|356536609|ref|XP_003536829.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 787
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 155/385 (40%), Gaps = 49/385 (12%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D GK +F + F II QGR + +T + +I Y + G L +AC ++ +M
Sbjct: 252 LIDTYGKGGQFHAACETFARIIRQGRALNTVTLNTMIHLYGNC---GRLRQACLLFQKM- 307
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
G ++ P + L+S + ++ A F + + LE D+ S L+
Sbjct: 308 --GEFRCVPDTWT--YNILISL--NIKNNKVKLAAKYFARMKKAFLE--PDVVSYRTLLY 359
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+Y L +EM + E + ++ R+ + G +E + W R I
Sbjct: 360 AYSTRKMVREAEELIREMDERDLEIDEFTQSALTRMYVESGMLEQSW-LWFRRFHLAGNI 418
Query: 366 PTPAFVYKMEAYAKIG---------------------EFM-------------KSLEIFR 391
+ + ++AY + G EF K+ ++F
Sbjct: 419 SSDCYSANIDAYGEWGYTLAAEKVFICCKEKKKLTVLEFNVMIKAYGIGKCYDKACQLFD 478
Query: 392 EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
M++ A +Y +I +L A++ L +S +K+ E G+ Y + + + LG
Sbjct: 479 SMKKFGVVADKCSYSSLIHILASADKPHLAKSYLKKMQEAGLVSDCVPYCVVISSFTKLG 538
Query: 452 MHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC 510
+ + E L +P+ IYG+++ + +AG++++A N M G N
Sbjct: 539 QFEMAEELYKEMLGYAVQPDVIIYGVFINAFADAGSVKEAINYVNEMRKAGLPG-NPAIY 597
Query: 511 NIILSAYLSSGDFVKAEKIYDLMCL 535
N ++ Y G +A++ Y L+ L
Sbjct: 598 NSLIKLYTKVGYLKEAQETYKLIQL 622
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD------NIDKERI--SLLKKEMQQAG 327
LQ F F N L + L I L HS + N++K ++ + K + G
Sbjct: 5 LQLLGFTFTNTLETSLSIPNITSHALPLPHSPNEHRPKKLNLEKNKVHSTCSTKWVSHCG 64
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSL 387
+ +VLR D+++A + W SD I + + K + + ++L
Sbjct: 65 ------SIPAVLRALNTTHDLDNALRQWEEGTLSDREI---SVILKAQV-----SWQRAL 110
Query: 388 EIFREMQERLGSASVPAYHKIIEL--LCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+IF + + G + H I L L +A + +L ESL E G+ P+ +Y L +
Sbjct: 111 QIFEWFKNK-GRYDLNVIHYNIMLCTLGRARKWDLVESLWTEMNAKGVAPVNSTYGTLID 169
Query: 446 MYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
Y G+ + LA+ + ++ P+ GI + K AG +KA+E F
Sbjct: 170 AYSKGGLKEE-ALAWLQRMQSQGMEPDEVTMGIVVLLYKRAGEFQKAQEFF 219
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 150/351 (42%), Gaps = 29/351 (8%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCL-DEA 237
D L T + ++ K K F+ ++ G +P ++T+ +L+ + A C ++
Sbjct: 121 DAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKA----CKWEQG 176
Query: 238 CSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI 297
I+ M+ G+ P + ++ G + QA + L +G +
Sbjct: 177 HQIFEEMLS-KGHSPELVTYATVVN------GYCKAGRIDQALSLMRRLKGTGRSPSGSL 229
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL--SVLRVCAKEGDVEDAEKTW 355
YS LI D D+ R E+ + + ++V++ S + K G +++A+
Sbjct: 230 YSTLIDGLCKHDRHDEAR------ELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVH 283
Query: 356 LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
++++E+ ++ + + K ++ E+ + ER VP +++ LCK+
Sbjct: 284 VKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKS 343
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-----CRPN 470
E +++ +ETG + PS + + + L DRL A+ L+K C P+
Sbjct: 344 RRVEEACVILERMLETGDRA--PSVVTYSAVIDGLCKADRLDDAYV-VLQKMRRAGCVPD 400
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
Y +++ G +++A E+F MH ++ ++ + NI++ Y +
Sbjct: 401 VVTYTAIIDAFCKVGRLDEARELFQRMH-ERGCALDVVAYNILIRGYCRAA 450
>gi|414881861|tpg|DAA58992.1| TPA: hypothetical protein ZEAMMB73_732512 [Zea mays]
Length = 642
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 140/329 (42%), Gaps = 42/329 (12%)
Query: 132 VRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMG 191
+ LN ++ L+ +D + HC IR + +V+EWM ++ + A + Y+G
Sbjct: 68 IAALNRFEEVLQTQDCNIILRHCGDIRRWDDLSKVFEWMQEREMT--NAASYSSYFKYLG 125
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIV-AYLSAPVQ-GCLDEACSIYNRMIQLGG 249
R A+ ++ I ++ + H+ + + L V+ G LD + +Y+ MI+ G
Sbjct: 126 LSRDPARVLRVYGAIKDR-----TLRVHVSVCNSVLGCLVKNGRLDSSFKLYDEMIR-EG 179
Query: 250 YQPRPSLHNSLFRALV------SKPGGL------------------------SKYYLQQA 279
P P +++L + +K GL S Y ++A
Sbjct: 180 LSPDPFTYSTLLAGCMKLKQGYTKAMGLINEMKSRGLQMDIVIYGTLLAICASHNYCEEA 239
Query: 280 EFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVL 339
E F + G YS L L++Y +N D + LL K+++ +G K +L ++L
Sbjct: 240 EVYFQKMKDEGHSPNLFHYSSL--LNAYSENSDYGKAELLMKDLRSSGLTPNKVMLTTLL 297
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
+V +K G E A+ L S + ++ K G+ ++ +F EM+E+
Sbjct: 298 KVYSKGGLFEKAKGLLTELEASGFAQDEMPYCILIDGLVKGGKIQEANILFNEMKEKGVK 357
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEF 428
+ A+ +I L + + ++ L KEF
Sbjct: 358 SDGYAFSIMISALHRGGHHQESKQLAKEF 386
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 122/283 (43%), Gaps = 19/283 (6%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ TF +I + + G + A I++ M++ G P N+L LV K
Sbjct: 567 PTTRTFMPIIHGFARS---GDMRRALEIFD-MMRWSGCIPTVHTFNALILGLVEK----- 617
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+++A I + +G+ + Y+ + +H Y D + +++ G E
Sbjct: 618 -CQMEKAVEILDEMSLAGISPNEHTYTTI--MHGYASLGDTGKAFEYFTKLKTEGLELDV 674
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIF 390
++L+ C K G ++ A + S IP FVY + + +A+ G+ ++ E+
Sbjct: 675 YTYEALLKACCKSGRMQSALAVTREM--SSQKIPRNTFVYNILIDGWARRGDVWEAAELM 732
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
++M++ + Y I CKA + + ++E G+KP + +Y L + +
Sbjct: 733 QQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARA 792
Query: 451 GMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEE 492
+ ++ F E +P++ +Y + SL + ++ AEE
Sbjct: 793 SLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASV--AEE 833
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 148/363 (40%), Gaps = 23/363 (6%)
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
R +F L + Y + R F+ + +G P+ + LI AY V ++E
Sbjct: 289 RKEFGL---MVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYA---VGRDMEE 342
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSL--FRALVSKPGGLSKYY-LQQAEFIFHNLLTSGLEI 293
A S +M + G + SL + LV GG +K + A+ F +
Sbjct: 343 ALSCVRKMKEEG-------IEMSLVTYSILV---GGFAKIADAEAADHWFKEAKERHTTL 392
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
IY +I+ H N+ + L +EM++ G + ++ +++ G+ E
Sbjct: 393 NAIIYGNIIYAHCQACNMTQAE--ALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLI 450
Query: 354 TWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
+ RL E ++ + Y KIG+ K+LE+ + M+ ++ Y +I
Sbjct: 451 VFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFV 510
Query: 414 KAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRT 472
+ ++ ++ ++ V+ G+KP + Y N+ + +G DR E E+ RP
Sbjct: 511 RLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTR 570
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDL 532
+ + +G++ +A EIF+ M I + N ++ + KA +I D
Sbjct: 571 TFMPIIHGFARSGDMRRALEIFDMMRWSGCIPT-VHTFNALILGLVEKCQMEKAVEILDE 629
Query: 533 MCL 535
M L
Sbjct: 630 MSL 632
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 137/337 (40%), Gaps = 49/337 (14%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
KC +FD + G PS +++ LI Y+ G + +A + ++M+++ G + +
Sbjct: 447 KCLIVFDRLKECGFTPSVISYGCLINLYIKI---GKVSKALEV-SKMMEVAGIKHNMKTY 502
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
+ L V L + A +F +++ GL+ +Y+ +I N+D+ +
Sbjct: 503 SMLINGFVR----LKDW--ANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRT 556
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
+ KEMQ+ E T T F+ + +
Sbjct: 557 V--KEMQK-----------------------ERHRPT------------TRTFMPIIHGF 579
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
A+ G+ ++LEIF M+ +V ++ +I L + + E ++ E G+ P
Sbjct: 580 ARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNE 639
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+Y + + Y +LG + F++ E + Y L++ +G ++ A +
Sbjct: 640 HTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTRE 699
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M S Q I NT NI++ + GD +A ++ M
Sbjct: 700 M-SSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQM 735
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 179/452 (39%), Gaps = 51/452 (11%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
C R R+ F +++ Y D + L + + E + ++ ++ D ++ G P
Sbjct: 117 CCRCRKLSLAFSAMGKIIKL-GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV-SKPGGLS 272
+ +T + L+ + G + +A + +RM++ G +QP + + + + S L+
Sbjct: 176 TLITLNALVNGLC---LNGKVSDAVLLIDRMVETG-FQPNEVTYGPVLKVMCKSGQTALA 231
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
L++ E L I I GL S + + L EM+ GF+
Sbjct: 232 MELLRKMEERKIKLDAVKYSI---IIDGLCKDGSLDNAFN------LFNEMEIKGFKADI 282
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
+ +++R G +D K +++ AF ++ + K G+ ++ E+ +E
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
M +R S Y +I+ CK + + ++ V G P + ++ L N Y +
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 453 -HDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
D L L L + Y ++ G +E A+E+F M S + + + S
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS-RRVRPDIVSYK 461
Query: 512 IILSAYLSSGD-------FVKAEK--------IYDL----MCLKKYEIESAWMEKLDYVL 552
I+L +G+ F K EK IY++ MC +++ AW D
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC-NASKVDDAW----DLFC 516
Query: 553 SLNRKEVKKPVSLNLSSEQRENLIGLLLGGLC 584
SL K VK V +++GGLC
Sbjct: 517 SLPLKGVKPDVK----------TYNIMIGGLC 538
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 132/347 (38%), Gaps = 68/347 (19%)
Query: 232 GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGL 291
G LD A +++N M ++ G++ ++ +L R F + G
Sbjct: 261 GSLDNAFNLFNEM-EIKGFKADIIIYTTLIRG-----------------FCYAGRWDDGA 302
Query: 292 EIQKD-----IYSGLIWLHSYQDNIDKE----RISLLKKEMQQAGFEEGKEVLLSVLRVC 342
++ +D I ++ + D KE L KEM Q G S++
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
KE ++ A ++ G F + Y K LE+FR+M R A
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY---------------------- 440
Y+ +I+ C+ + E+ + L +E V ++P + SY
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Query: 441 INLTNMYLNLGMH--------------DRLHLAFSECLEKCRPNRTIYGIYLESLKNAGN 486
I + M L++G++ D L S L+ +P+ Y I + L G+
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSC--NIILSAYLSSGDFVKAEKIYD 531
+ +A+ +F M D G + C NI++ A+L GD K+ K+ +
Sbjct: 543 LSEADLLFRKMEED---GHSPNGCTYNILIRAHLGEGDATKSAKLIE 586
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 136/318 (42%), Gaps = 18/318 (5%)
Query: 205 DIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL 264
D++ +G PS + F+ +I AY A ++ D+A Y M+ G P PS +SL L
Sbjct: 466 DMLEKGLSPSIIAFNSVIAAYSQAGLE---DKAFEAYKLMVHFG-LTPSPSTCSSLLMGL 521
Query: 265 VSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQ 324
S G LQ+A + ++ GL + ++ + L + D L EM+
Sbjct: 522 -SING-----RLQEATELIGQMIEKGLSVNNMAFT--VLLDKFFKRGDVVGAQSLWGEME 573
Query: 325 QAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGE 382
+ G + + +K+G VE+A +L +L G+ F Y + + K G+
Sbjct: 574 RRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRK--GLIPNNFAYNSLICGFCKCGK 631
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
++L++ + M+ R + + II LCK ++ + +TG+ P + +Y
Sbjct: 632 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNT 691
Query: 443 LTNMYLN-LGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQ 501
L N Y M + +L P+ T Y I + ++ + +A + + + S
Sbjct: 692 LINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG 751
Query: 502 TIGVNTRSCNIILSAYLS 519
+ NT + N +L+ S
Sbjct: 752 IVP-NTVTYNSMLNGVCS 768
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 139/343 (40%), Gaps = 14/343 (4%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K R+ + +++++ +G P +TF+IL+ S + +E + I + G
Sbjct: 383 KMREIDQANMLYEEMRKKGIAPDGITFNILV----SGHYKYGREEDGDRLLKDISVLGLL 438
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P SL + +S G L +A ++L GL ++ +I +S
Sbjct: 439 PDRSLFD------ISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLE 492
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
DK + K M G S+L + G +++A + +++E + AF
Sbjct: 493 DKAFEAY--KLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFT 550
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
++ + K G+ + + ++ EM+ R V A+ I+ L K E ++ E +
Sbjct: 551 VLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRK 610
Query: 432 GMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKA 490
G+ P +Y +L + G +++ L L P+ + + L G + A
Sbjct: 611 GLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSA 670
Query: 491 EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+F MH + + + N +++ Y + D V A+ + + M
Sbjct: 671 INVFMDMHQ-TGLSPDIITYNTLINGYCKAFDMVNADNLVNRM 712
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 132/333 (39%), Gaps = 50/333 (15%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D L G+ ++ +F ++ G VP TF+ LI +Y G D+A
Sbjct: 445 DIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRC---GSFDQAM 501
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
++Y RM++ G P S +N++ AL GGL K Q+E + + + + Y
Sbjct: 502 AVYKRMLE-AGVNPDLSSYNAVLAALAR--GGLWK----QSEKVLAEMKDGRCKPNELTY 554
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV-EDAEKTWLR 357
L LH+Y + + ER+ L +E+ +G E + VLL L + + D+ + E+ +L
Sbjct: 555 CSL--LHAYANGKEIERMCALAEEIY-SGIIEPRAVLLKTLVLVNSKCDLLMETERAFLE 611
Query: 358 LLESD--------------------------------NGIPTPAFVYK---MEAYAKIGE 382
L + G TP+ M Y++
Sbjct: 612 LRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSAN 671
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
F +S EI RE+ + + +Y+ +I C+ ++ E E+G P + +Y
Sbjct: 672 FERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNT 731
Query: 443 LTNMYLNLGMH-DRLHLAFSECLEKCRPNRTIY 474
Y M + + + C+PN++ Y
Sbjct: 732 FIASYAADSMFVEAIDVVCYMIKHGCKPNQSTY 764
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 90/465 (19%), Positives = 176/465 (37%), Gaps = 96/465 (20%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ + D L D GK R+ + ++ ++ G PS +T++ LI AY
Sbjct: 297 MKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYAR--- 353
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G L++A + N+M++ G +P + +L + G K +Q IF + G
Sbjct: 354 DGLLEDALELKNQMVE-KGIKPDVFTYTTLLSGF--EKAGKDKAAVQ----IFEEMRNEG 406
Query: 291 LEIQKDIYSGLIWLHSY----------------------------------QDNIDKERI 316
+ ++ LI +H Q+ +D E +
Sbjct: 407 CKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSE-V 465
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEA 376
S + KEM++AGF ++ +++ ++ G + A + R+LE+ ++ + A
Sbjct: 466 SGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAA 525
Query: 377 YAKIGEFMKSLEIFREMQ------------------------ERLGSASVPAYHKIIE-- 410
A+ G + +S ++ EM+ ER+ + + Y IIE
Sbjct: 526 LARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPR 585
Query: 411 ------LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA--FSE 462
L+ + +L + F+E + P L M G + A +
Sbjct: 586 AVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILD 645
Query: 463 CLEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSS 520
C+++ P+ T Y + + N E++EEI + + + I + S N ++ AY +
Sbjct: 646 CMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILA-KGIRPDIISYNTVIYAYCRN 704
Query: 521 GDFVKAEKIYDLM--------------CLKKYEIESAWMEKLDYV 551
G A ++ M + Y +S ++E +D V
Sbjct: 705 GRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVV 749
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 148/336 (44%), Gaps = 27/336 (8%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAY--LSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
+F + G P+ +T+++++ Y + P ++ + +RM + G P +N+
Sbjct: 222 VFKKMEEVGCKPTLITYNVILNVYGKMGMP----WNKMVGLVDRM-KSAGIAPDSYTYNT 276
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
L + G L ++A + + +G K Y+ L+ ++ + KE + +L
Sbjct: 277 LISC--CRRGNL----YEEAAGVLKEMKLAGFSPDKVTYNALLDVYG-KSRRSKEAMEVL 329
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAY 377
+ EM+ G S++ A++G +EDA + +++E GI F Y + +
Sbjct: 330 Q-EMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEK--GIKPDVFTYTTLLSGF 386
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM---K 434
K G+ +++IF EM+ ++ ++ +I++ + TE +MK F +
Sbjct: 387 EKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKM--HGNRGKFTE-MMKVFEDIKTFQCS 443
Query: 435 PLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEI 493
P + ++ L +++ GM + F E P R + + S G+ ++A +
Sbjct: 444 PDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAV 503
Query: 494 FNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
+ M + + + S N +L+A G + ++EK+
Sbjct: 504 YKRML-EAGVNPDLSSYNAVLAALARGGLWKQSEKV 538
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 138/320 (43%), Gaps = 34/320 (10%)
Query: 233 CLDEACSIYNRMIQLGGYQPRPSL--HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
CLD+A S++ +M++ +P PS+ + L +ALV K+Y +S
Sbjct: 52 CLDDAFSLFRQMVRT---KPLPSVVSFSKLLKALVHM-----KHY------------SSV 91
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKK-----EMQQAGFEEG----KEVLLSVLRV 341
+ + ++I+ I +H + +I L+ + + F++G + + ++LR
Sbjct: 92 VSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRG 151
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
E V+DA + +L+ + P + M K G K+ ++ R M++
Sbjct: 152 LFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKP 211
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
+ Y +I+ CK + SL+ E + + P + +Y L + L + + F
Sbjct: 212 NTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLF 271
Query: 461 SECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
E + PN + ++ L G +E AEEI +M ++ + + + N+I+ Y
Sbjct: 272 LEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYM-IEKGVDPDVITYNMIIDGYGL 330
Query: 520 SGDFVKAEKIYDLMCLKKYE 539
G +A +I+D M K E
Sbjct: 331 RGQVDRAREIFDSMINKSIE 350
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 109/246 (44%), Gaps = 18/246 (7%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ D G + + R+IFD +IN+ P+ ++++ILI Y Q +DEA + R I
Sbjct: 324 IIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYAR---QKKIDEAMQVC-REI 379
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
G +P N L L G +K A+ F +L++G D+Y+ L
Sbjct: 380 SQKGLKPSIVTCNVLLHGLFEL--GRTK----SAQNFFDEMLSAGH--IPDLYTHCTLLG 431
Query: 306 SY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
Y ++ + +E +S K +++ + ++ +V+ K G ++ A T+ +L
Sbjct: 432 GYFKNGLVEEAMSHFHK-LERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLH 490
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
+ + Y + G ++ ++ R+M++ A Y+ I+ ++ + S
Sbjct: 491 PDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKV----SE 546
Query: 425 MKEFVE 430
MK F+E
Sbjct: 547 MKAFLE 552
Score = 39.3 bits (90), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQ 394
SV+ KEG VEDAE+ ++E G+ Y M + Y G+ ++ EIF M
Sbjct: 288 SVIDGLCKEGKVEDAEEIMRYMIEK--GVDPDVITYNMIIDGYGLRGQVDRAREIFDSMI 345
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ ++ +Y+ +I + ++ + + +E + G+KP
Sbjct: 346 NKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKP 386
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 123/298 (41%), Gaps = 14/298 (4%)
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
G P +N L RAL ++ L++A + ++ +G Y+ L+
Sbjct: 147 GVAPNVYTYNILVRALCARG------RLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRA 200
Query: 309 DNID-KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+D ER+ L +E A + S++ K G +E A K + ++
Sbjct: 201 GELDGAERVVSLMREEGNA--KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDV 258
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
++ + Y K+G +SL +F EM +R V + +I CKA E +L+ +
Sbjct: 259 VSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLESLKNAG 485
E G++ ++ L + + G D LA E + KC +P+ Y + G
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEE-MRKCGIQPSVVCYNALINGYCKLG 377
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESA 543
++ A E+ M + + + + + + I+S Y G+ A ++ M LKK + A
Sbjct: 378 RMDLARELIREMEAKR-VKPDVVTYSTIISGYCKVGNLDSAFQLNQKM-LKKGVLPDA 433
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 138/356 (38%), Gaps = 59/356 (16%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
T +A C R E + RV M ++ + + + + + K + R +FD+++
Sbjct: 192 TLVAAFC-RAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV 250
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
+G P ++++ L+ Y GCL E+ ++++ M Q G P SL A K
Sbjct: 251 REGLAPDVVSYNTLLSGYCKV---GCLHESLAVFSEMTQRG-LVPDVVTFTSLIHA-TCK 305
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
G L +QA + + GL + + ++ LI D K+ G
Sbjct: 306 AGNL-----EQAVALVAQMRERGLRMNEVTFTALI------DGFCKK------------G 342
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMK 385
F + + + +R C GI Y + Y K+G
Sbjct: 343 FLDDALLAVEEMRKC---------------------GIQPSVVCYNALINGYCKLGRMDL 381
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+ E+ REM+ + V Y II CK + L ++ ++ G ++P I ++
Sbjct: 382 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG---VLPDAITYSS 438
Query: 446 MYLNLGMHDRLHLA---FSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ L RL+ A F L+ +P+ Y ++ GN+EKA + + M
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494
Score = 39.3 bits (90), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
++E M+Q +F T L D KE K + D++I +G +P +T+ +LI
Sbjct: 455 LFENMLQLGVQPDEFTYTT-LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLING- 512
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRP----------SLHNSLFRALVSKPGGLS-KY 274
LS + EA + + +L P P + F+++V+ G K
Sbjct: 513 LSKSAR--TKEA---HRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 567
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
+++A+ ++ ++L ++ +YS LI H N+ K K+M ++GF
Sbjct: 568 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALS--FHKQMLRSGFSPNSTS 625
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLL 359
+S++R +EG V +A+ LL
Sbjct: 626 TISLVRGLFEEGMVVEADNAIQDLL 650
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 179/452 (39%), Gaps = 51/452 (11%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
C R R+ F +++ Y D + L + + E + ++ ++ D ++ G P
Sbjct: 117 CCRCRKLSLAFSAMGKIIKL-GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV-SKPGGLS 272
+ +T + L+ + G + +A + +RM++ G +QP + + + + S L+
Sbjct: 176 TLITLNALVNGLC---LNGKVSDAVLLIDRMVETG-FQPNEVTYGPVLKVMCKSGQTALA 231
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
L++ E L I I GL S + + L EM+ GF+
Sbjct: 232 MELLRKMEERKIKLDAVKYSI---IIDGLCKDGSLDNAFN------LFNEMEIKGFKADI 282
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
+ +++R G +D K +++ AF ++ + K G+ ++ E+ +E
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
M +R S Y +I+ CK + + ++ V G P + ++ L N Y +
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 453 -HDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
D L L L + Y ++ G +E A+E+F M S + + + S
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS-RRVRPDIVSYK 461
Query: 512 IILSAYLSSGD-------FVKAEK--------IYDL----MCLKKYEIESAWMEKLDYVL 552
I+L +G+ F K EK IY++ MC +++ AW D
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC-NASKVDDAW----DLFC 516
Query: 553 SLNRKEVKKPVSLNLSSEQRENLIGLLLGGLC 584
SL K VK V +++GGLC
Sbjct: 517 SLPLKGVKPDV----------KTYNIMIGGLC 538
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 145/373 (38%), Gaps = 68/373 (18%)
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G LD A +++N M ++ G++ ++ +L R F + G
Sbjct: 260 DGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRG-----------------FCYAGRWDDG 301
Query: 291 LEIQKD-----IYSGLIWLHSYQDNIDKE----RISLLKKEMQQAGFEEGKEVLLSVLRV 341
++ +D I ++ + D KE L KEM Q G S++
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSAS 401
KE ++ A ++ G F + Y K LE+FR+M R A
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY--------------------- 440
Y+ +I+ C+ + E+ + L +E V ++P + SY
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE 481
Query: 441 -INLTNMYLNLGMH--------------DRLHLAFSECLEKCRPNRTIYGIYLESLKNAG 485
I + M L++G++ D L S L+ +P+ Y I + L G
Sbjct: 482 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSC--NIILSAYLSSGDFVKAEKIYDLMCLKKYEIESA 543
++ +A+ +F M D G + C NI++ A+L GD K+ K+ + + + ++++
Sbjct: 542 SLSEADLLFRKMEED---GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAS 598
Query: 544 WMEKLDYVLSLNR 556
++ + +LS R
Sbjct: 599 TVKMVVDMLSDGR 611
>gi|357157771|ref|XP_003577908.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Brachypodium distachyon]
Length = 512
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 155/375 (41%), Gaps = 23/375 (6%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
+V+E + +Q +Y KL +G+ + A +F D+ QG P+ + LI
Sbjct: 141 ALQVFEMLKEQPFYYPKEGTYMKLLLLLGRSGQPALAHRLFADMQQQGCQPTPELYTALI 200
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV--SKPGGLSKYYLQQAE 280
AY + G LD+A + M QP +++L +ALV S+ + Y + AE
Sbjct: 201 AAYCRS---GLLDDALRLLGDMKAAPLCQPDVYTYSTLIKALVDASRFDLVDAMYKEMAE 257
Query: 281 -FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVL 339
+ N +T + + +G + D+++K LL + + + +L
Sbjct: 258 RGVAPNTVTQNIVLSGYGRAGRM------DDMEK----LLSAMLDSTASKPDVWTMNIIL 307
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
+ G V+ EK + + T + AY K + K + M++
Sbjct: 308 SLFGNSGQVDLMEKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEFMRKLAFP 367
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL--H 457
+ Y+ +IE +A + + E + GMKP ++ L N + G+ ++
Sbjct: 368 WTTSTYNNVIEAFAEAGDEKNMEQTFNQMRSEGMKPDTKTFCCLINGFSKAGLFHKVVGM 427
Query: 458 LAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
+ +E L+ N + + L + AG++ + E +F HM Q + + +I++ AY
Sbjct: 428 VKLAERLD-VPANTSFHNSVLAACARAGDLVEMERVFRHMKHVQ-CAPDATTYSILVEAY 485
Query: 518 LSSGDFVKAEKIYDL 532
G +K+YDL
Sbjct: 486 RKEG---MTDKVYDL 497
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD---RLHLAFS 461
Y K++ LL ++ + L L + + G +P Y L Y G+ D RL L
Sbjct: 161 YMKLLLLLGRSGQPALAHRLFADMQQQGCQPTPELYTALIAAYCRSGLLDDALRL-LGDM 219
Query: 462 ECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
+ C+P+ Y +++L +A + + ++ M +++ + NT + NI+LS Y +G
Sbjct: 220 KAAPLCQPDVYTYSTLIKALVDASRFDLVDAMYKEM-AERGVAPNTVTQNIVLSGYGRAG 278
Query: 522 DFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSL 554
EK+ M W ++ +LSL
Sbjct: 279 RMDDMEKLLSAMLDSTASKPDVWT--MNIILSL 309
>gi|34393621|dbj|BAC83297.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 657
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 126/295 (42%), Gaps = 12/295 (4%)
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
+ ++L G +P ++N L LV+ GL L A +F + T +++ D+ S I
Sbjct: 210 KAMRLAGVEPSRLIYNCLLDGLVN--AGL----LDTAVNVFDAMSTED-QVRPDVVSYNI 262
Query: 303 WLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
+ Y + + ++ L + +QA K L++++ EG + + E
Sbjct: 263 LIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEER 322
Query: 362 D--NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
N IP A+V + A K G+ + + +F M +R +A+ Y +I+ + K +
Sbjct: 323 GMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREK 382
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYL 478
+L + ++G+K +Y + N G D F C EK N Y +
Sbjct: 383 EAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLI 442
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ AG +++++E+F M + + ++ N+++ SG A +Y M
Sbjct: 443 DGFGKAGMVDQSKELFEEMIAKGFVP-DSYCYNVLIDGLAKSGRMDDACALYKRM 496
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 111/272 (40%), Gaps = 18/272 (6%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
G V+E M+++ + A+ T L D MGK + + +F+ + + G +T+ +++
Sbjct: 349 GMAVFERMLKRGCAA-NAAIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIV 407
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
G LDEA + + R Q G + SL K G + Q++ +
Sbjct: 408 NCLCRF---GKLDEAVACF-RSCQEKGIAVNAIFYTSLIDGF-GKAG-----MVDQSKEL 457
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
F ++ G Y+ LI + +D L K M+ G ++ ++
Sbjct: 458 FEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDA--CALYKRMEDDGCDQTVYTYTILIDGL 515
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI--GEFMKSLEIFREMQERLGSA 400
KE E+A K W ++ D GI A ++ A G+F ++ I E+ +G
Sbjct: 516 FKEHKNEEALKFWDAMI--DKGITPTAAAFRTLASGLCLSGKFSRACRILDELAP-MGVI 572
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETG 432
A+ +I +LCKA + L V+ G
Sbjct: 573 PETAHEDMINVLCKAGRFKQACKLADGIVQKG 604
>gi|297810935|ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319188|gb|EFH49610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1281
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 126/313 (40%), Gaps = 23/313 (7%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
+ + W +Q YR D +A + + R+ A + DI+N + S I
Sbjct: 89 AYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLTALVGDILNSRCLMSPGALGFFI 148
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
+A G ++EA S+++R+ ++G P +N L A +SK S ++ E
Sbjct: 149 RCLGNA---GLVEEASSVFDRVREMGLCVPNAYTYNCLLEA-ISKSNSSS---VELVEAR 201
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
+ G K + + L Y +N ER + E+ G+ + + V+ C
Sbjct: 202 LKEMRDCGFHFDKFTLTPV--LQVYCNNGKSERALSVFNEILSRGWLDEHISTILVVSFC 259
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
K G V+ A + L E + F + + K K+ ++F +M+ + +
Sbjct: 260 -KWGQVDKAFELIEMLEERHIRLNYKTFCVLIHGFVKESRIDKAFQLFEKMRRMGMNPDI 318
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
Y +I LCK ++ E+ SL E +G+ P + G+ +L +FSE
Sbjct: 319 ALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPP-------------DRGILGKLLCSFSE 365
Query: 463 CLEKCRPNRTIYG 475
E R + I G
Sbjct: 366 ESELSRITKVIIG 378
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA 378
L K+M+ GFE + +++ + G DA K + + F+ M +Y
Sbjct: 531 LLKKMRFYGFEPWIKHTTCLVKKLCENGKAVDACKYI-------DDVAGEGFLRHMVSYT 583
Query: 379 KIGEFM-------KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
E + + LE+FR+ V AYH +I+ LCKA T ++L E V
Sbjct: 584 AAIEGLIRNEGVDRGLELFRDTCANGHCPDVIAYHVLIKALCKACRTTEADNLFNEMVSK 643
Query: 432 GMKPLMPSYINLTNMYLNLGMHDR 455
G+KP + +Y ++ + + G DR
Sbjct: 644 GLKPSVATYNSMIDGWCKEGEIDR 667
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/378 (18%), Positives = 158/378 (41%), Gaps = 22/378 (5%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
C R E G ++E M+++ + D + L + + R ++++++ +G P
Sbjct: 267 CGRFSE---GLEIWE-RMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRP 322
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK 273
+T + ++ A G ++E ++ M + R +N + L
Sbjct: 323 DVVTCNAMLNGLCKA---GNVEECFELWEEMGKCSLRNVRS--YNIFLKGL------FEN 371
Query: 274 YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKE 333
+ A ++ LL + + GL W +++ L + E ++ G + +
Sbjct: 372 GKVDDAMMLWDGLLEADSATYGVVVHGLCW----NGYVNRALQVLEEAEHREGGMDVDEF 427
Query: 334 VLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREM 393
S++ KEG +++A+ + + + ++ + K + ++++FREM
Sbjct: 428 AYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREM 487
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
+ S +V +Y+ +I L +AE + E +E G KP + +Y L M
Sbjct: 488 SGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMM 547
Query: 454 DRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI 512
D + + L+ +P+ +Y I + L ++G +E A ++++ + + + + T N
Sbjct: 548 DAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCVNLVTH--NT 605
Query: 513 ILSAYLSSGDFVKAEKIY 530
I+ + G+ A KI+
Sbjct: 606 IMEGFYKVGNCEMASKIW 623
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 72/166 (43%), Gaps = 1/166 (0%)
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
+F + A+ + ++ ++ F+ + S +V Y+ +++++CK E E L+
Sbjct: 115 SFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWM 174
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNI 487
GM P +Y L G F E E+ P+ Y + ++ G+
Sbjct: 175 WGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDF 234
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
KA E++ + ++ + + S N+++S G F + +I++ M
Sbjct: 235 VKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERM 280
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 3/171 (1%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKI 380
EM++ G E ++ K GD A + W RLL + P+ ++ + K
Sbjct: 208 EMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKC 267
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G F + LEI+ M++ + Y +I L +A + + +E V G++P + +
Sbjct: 268 GRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTC 327
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEKCR-PNRTIYGIYLESLKNAGNIEKA 490
+ N G + + E + KC N Y I+L+ L G ++ A
Sbjct: 328 NAMLNGLCKAGNVEECFELWEE-MGKCSLRNVRSYNIFLKGLFENGKVDDA 377
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
+S LI + + N+DK + L M G V ++ K G +ED ++ L
Sbjct: 310 FSTLIDAYCKEGNLDKAFV--LFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLV 367
Query: 358 LLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
L+ + F M+AY KIG+ + ++I++ M S +V + +I+ C+
Sbjct: 368 ALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGR 427
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGI 476
L + ++ G +P + +Y L + G + D +L ++C P+ +Y +
Sbjct: 428 ILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSV 487
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ L G + A F ++ + N + N +L ++ V A K+Y LM
Sbjct: 488 LINGLCKQGLVGDALRFF-FQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLM 543
>gi|75265624|sp|Q9SCP4.1|PP279_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g53170
gi|6630737|emb|CAB64220.1| nodulin / glutamate-ammonia ligase-like protein [Arabidopsis
thaliana]
Length = 447
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 125/298 (41%), Gaps = 16/298 (5%)
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRAL--VSKPGGLSKYYLQQAEFIFHNLLTSGLEIQ 294
A I+N + + Y+PR + LF+ L +P QA +F +L+ GL+
Sbjct: 77 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQP--------DQASLLFEVMLSEGLKPT 128
Query: 295 KDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKT 354
D+Y+ LI ++ + +DK S L+ + + ++ C K G + +
Sbjct: 129 IDVYTSLISVYGKSELLDKA-FSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSI 187
Query: 355 WLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS-ASVPAYHKIIELLC 413
L + G T + ++ Y K G F + + +M E S V + II
Sbjct: 188 VLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYG 247
Query: 414 KAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNR 471
ES F G++P + ++ L + GM+ ++ + + +EK
Sbjct: 248 NGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKM-CSVMDFMEKRFFSLTT 306
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
Y I +E+ AG IEK +++F M Q + N+ + +++AY +G VK + +
Sbjct: 307 VTYNIVIETFGKAGRIEKMDDVFRKMKY-QGVKPNSITYCSLVNAYSKAGLVVKIDSV 363
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 104/253 (41%), Gaps = 23/253 (9%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQG-RVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM 244
+ D GK F + + D+I G +P T + +I +Y + ++ S Y+R
Sbjct: 206 IIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKME---SWYSRF 262
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI---FHNLLTSGLEIQKDIY--S 299
QL G QP + N L + G+ K +F+ F +L T I + + +
Sbjct: 263 -QLMGVQPDITTFNILILSF--GKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKA 319
Query: 300 GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
G I E++ + ++M+ G + S++ +K G V + +++
Sbjct: 320 GRI-----------EKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIV 368
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
SD + TP F + AY + G+ E++ +M+ER + +I+ +
Sbjct: 369 NSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFD 428
Query: 420 LTESLMKEFVETG 432
+ L K+ + +G
Sbjct: 429 AVQELEKQMISSG 441
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 134/312 (42%), Gaps = 27/312 (8%)
Query: 235 DEACSIYNRMIQLGGYQPRPSL--HNSLFRALV-SKPGGLSKYYLQQAEF--IFHNLLTS 289
D+A +++ MI+ +P PSL + F A+ +K L + +Q E I HN+ T
Sbjct: 60 DDAIALFQEMIR---SRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT- 115
Query: 290 GLEIQKDIYSGLI-WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
L I + + +Y S+L K M+ G+E ++++ EG V
Sbjct: 116 -LNIMINCFCRCCKTCFAY---------SVLGKVMK-LGYEPDTTTFNTLIKGLFLEGKV 164
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
+A R++E NG Y + + G+ +L++ R+M+ER A V Y
Sbjct: 165 SEAVVLVDRMVE--NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 222
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK 466
II+ LC+ + SL KE G+K + +Y +L G + L + + +
Sbjct: 223 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 282
Query: 467 -CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
PN + + L+ G +++A E++ M + + I N + N ++ Y +
Sbjct: 283 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT-RGISPNIITYNTLMDGYCMQNRLSE 341
Query: 526 AEKIYDLMCLKK 537
A + DLM K
Sbjct: 342 ANNMLDLMVRNK 353
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 69/383 (18%), Positives = 148/383 (38%), Gaps = 46/383 (12%)
Query: 232 GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGL 291
GC+D A S++ M + G + +NSL R L K G + L + +
Sbjct: 232 GCIDAAISLFKEM-ETKGIKSSVVTYNSLVRGLC-KAGKWNDGALLLKDMVSR------- 282
Query: 292 EIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
EI ++ + + L + + + L KEM G +++ + + +A
Sbjct: 283 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 342
Query: 352 EKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
++ + F ++ Y + +++FR + +R A+ Y +++
Sbjct: 343 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 402
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSY----------------------INLTNMYLN 449
C++ + +L E L +E V G+ P + +Y + + M L
Sbjct: 403 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 462
Query: 450 LGMH--------------DRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
+ M+ D +L S + +PN Y + + L G++ +A +
Sbjct: 463 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 522
Query: 496 HMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLN 555
M D N + N ++ A+L GD + K+ + M + +++ ++ + +L
Sbjct: 523 KMEEDGN-APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA 581
Query: 556 RKEVKKPVSLNLSSEQRENLIGL 578
K + L+ S+ R++L+ L
Sbjct: 582 MKRLTLRYCLSKGSKSRQDLLEL 604
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 143/342 (41%), Gaps = 30/342 (8%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS--LHN 258
D D G F L++A+ SA G EA ++RM G + RP+ ++N
Sbjct: 130 DALADARAAGLPAPSAAFRALVLAHSSA---GRHQEAVEAFSRM---GDFDCRPTAFVYN 183
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
++F+ LV + + A +++ +++SG Y L+ D + K +++
Sbjct: 184 AVFQVLVDRG------VILLALALYNRMVSSGCLPNSTTYIVLM------DGLCKRGMAV 231
Query: 319 ----LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK- 373
+ EM + G ++ +L EG +EDA + + E NG P Y
Sbjct: 232 DALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKE--NGCPPDEVTYTV 289
Query: 374 -MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
+ K G ++ F +Q+ + + Y +I+ L +A + S E +
Sbjct: 290 FLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKS 349
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAE 491
+ P + Y L + G L E +K P+ Y L++L + GNI++A+
Sbjct: 350 ISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQ 409
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ + M + + +++ + NI++ G KA +++D M
Sbjct: 410 SLMSEMLQNNVV-LDSTTHNIMICGLCKKGLIDKAMQVFDEM 450
>gi|297725689|ref|NP_001175208.1| Os07g0491500 [Oryza sativa Japonica Group]
gi|255677777|dbj|BAH93936.1| Os07g0491500, partial [Oryza sativa Japonica Group]
Length = 654
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 126/295 (42%), Gaps = 12/295 (4%)
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
+ ++L G +P ++N L LV+ GL L A +F + T +++ D+ S I
Sbjct: 207 KAMRLAGVEPSRLIYNCLLDGLVN--AGL----LDTAVNVFDAMSTED-QVRPDVVSYNI 259
Query: 303 WLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
+ Y + + ++ L + +QA K L++++ EG + + E
Sbjct: 260 LIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEER 319
Query: 362 D--NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
N IP A+V + A K G+ + + +F M +R +A+ Y +I+ + K +
Sbjct: 320 GMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREK 379
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYL 478
+L + ++G+K +Y + N G D F C EK N Y +
Sbjct: 380 EAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLI 439
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ AG +++++E+F M + + ++ N+++ SG A +Y M
Sbjct: 440 DGFGKAGMVDQSKELFEEMIAKGFVP-DSYCYNVLIDGLAKSGRMDDACALYKRM 493
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 111/272 (40%), Gaps = 18/272 (6%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
G V+E M+++ + A+ T L D MGK + + +F+ + + G +T+ +++
Sbjct: 346 GMAVFERMLKRGCAA-NAAIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIV 404
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
G LDEA + + R Q G + SL K G + Q++ +
Sbjct: 405 NCLCRF---GKLDEAVACF-RSCQEKGIAVNAIFYTSLIDGF-GKAG-----MVDQSKEL 454
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
F ++ G Y+ LI + +D L K M+ G ++ ++
Sbjct: 455 FEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDA--CALYKRMEDDGCDQTVYTYTILIDGL 512
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI--GEFMKSLEIFREMQERLGSA 400
KE E+A K W ++ D GI A ++ A G+F ++ I E+ +G
Sbjct: 513 FKEHKNEEALKFWDAMI--DKGITPTAAAFRTLASGLCLSGKFSRACRILDELAP-MGVI 569
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETG 432
A+ +I +LCKA + L V+ G
Sbjct: 570 PETAHEDMINVLCKAGRFKQACKLADGIVQKG 601
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 155/389 (39%), Gaps = 26/389 (6%)
Query: 149 YLAVHCM-RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
++ ++C +++ + GF V +++ + L + + K KF + ++FDD++
Sbjct: 161 HMLINCFFQLQRVDLGFSVLAKIIKLGL-QLTIVTFNTLINGLCKVGKFGQAVELFDDMV 219
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
+G P T+ +I G A ++ +M + G QP ++++ +L
Sbjct: 220 ARGYQPDVHTYTTIINGLCKI---GETVAAAGLFRKMGE-AGCQPDVVTYSTIIDSLCKD 275
Query: 268 ---PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQ 324
L + +A+ I N+ T IQ GL +++ S + EM
Sbjct: 276 RRVNEALDIFSYMKAKGISPNIFTYNSLIQ-----GLCNFSRWRE------ASAMLNEMM 324
Query: 325 QAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGE 382
++ + KEG+V +A + E G+ Y M Y+ E
Sbjct: 325 SLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEM--GVEPNVVTYSSLMNGYSLQAE 382
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
+++ ++F M + V +Y+ +I CKA+ + L E + G+ P + SY
Sbjct: 383 VVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNT 442
Query: 443 LTNMYLNLGMHDRLHLAFSECLEKCR-PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQ 501
L + LG H F L P+ Y I L+ G + KA +F M S
Sbjct: 443 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQS-T 501
Query: 502 TIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+ N NI++ A S + +A K++
Sbjct: 502 YLKPNMVMYNILIDAMCKSRNLKEARKLF 530
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 128/304 (42%), Gaps = 27/304 (8%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ +++++ +P+ +TF +LI + +G + EA + M ++G +P ++SL
Sbjct: 319 MLNEMMSLNIMPNIVTFSLLINIFCK---EGNVFEARGVLKTMTEMG-VEPNVVTYSSL- 373
Query: 262 RALVSKPGGLSKYYLQ----QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
++ Y LQ +A +F ++T G + D++S I ++ Y +RI
Sbjct: 374 ---------MNGYSLQAEVVEARKLFDVMITKG--CKPDVFSYNILINGY---CKAKRIG 419
Query: 318 LLKK---EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM 374
K+ EM G +++ + G + +A + +L + N + +
Sbjct: 420 EAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILL 479
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
+ + K G K+ +FR MQ ++ Y+ +I+ +CK+ + L E G++
Sbjct: 480 DGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQ 539
Query: 435 PLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEI 493
P + Y + N G+ D AF E C PN Y + + + +A ++
Sbjct: 540 PNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQL 599
Query: 494 FNHM 497
M
Sbjct: 600 IGEM 603
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 102/241 (42%), Gaps = 13/241 (5%)
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
+ S ++ + Y D + ISL K+M+ AG L ++ + V+
Sbjct: 127 LLSAIVKMRHYHDAV----ISL-SKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLA 181
Query: 357 RLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
++++ + F + K+G+F +++E+F +M R V Y II LCK
Sbjct: 182 KIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIG 241
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECLEK-CRPNRT 472
ET L ++ E G +P + +Y + + +L R++ A FS K PN
Sbjct: 242 ETVAAAGLFRKMGEAGCQPDVVTYSTIID---SLCKDRRVNEALDIFSYMKAKGISPNIF 298
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDL 532
Y ++ L N +A + N M S I N + +++++ + G+ +A +
Sbjct: 299 TYNSLIQGLCNFSRWREASAMLNEMMS-LNIMPNIVTFSLLINIFCKEGNVFEARGVLKT 357
Query: 533 M 533
M
Sbjct: 358 M 358
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 12/233 (5%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
R +FD +I +G P +++ILI Y A G EA ++N MI G P +N+
Sbjct: 387 RKLFDVMITKGCKPDVFSYNILINGYCKAKRIG---EAKQLFNEMIH-QGLTPDIVSYNT 442
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
L L L + L++A +F N+LT+G YS L+ Q + K L
Sbjct: 443 LIDGLCQ----LGR--LREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKA--FRL 494
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAK 379
+ MQ + + ++ K ++++A K + L + + K
Sbjct: 495 FRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCK 554
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
G ++LE FR M+E + +Y+ II + ++ L+ E E G
Sbjct: 555 EGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKG 607
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 134/329 (40%), Gaps = 32/329 (9%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + F R++F D+ +G PS +T++++I A +G L+EAC + +
Sbjct: 362 TSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCK---RGMLEEACDLIKK 418
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
MI+ G+ P +N++ L +++A +F+ + G + ++ +I
Sbjct: 419 MIE-DGHVPDVVTYNTVMDGLCKSS------RVEEALLLFNEMERLGCTPNRRSHNTIIL 471
Query: 304 LHSYQDNIDK--------ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
Q ID+ E LLK+ M G +++ V+DA
Sbjct: 472 GLCQQSKIDQACQRGKLDEAFRLLKR-MTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 530
Query: 356 LRLLESDNGIPTPAFVYK---MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+++ P V + + K G ++ E+ M S V Y+ ++
Sbjct: 531 EDMVKRQC---KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGH 587
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECLEK-CR 468
C+A +TE L+ + V G+ P + +Y L + L +RL A F++ C
Sbjct: 588 CRAGQTERARELLSDMVARGLAPNVVTYTALVS---GLCKANRLPEACGVFAQMKSSGCA 644
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
PN Y + +AG ++ ++F M
Sbjct: 645 PNLFTYTALILGFCSAGQVDGGLKLFGEM 673
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 114/277 (41%), Gaps = 18/277 (6%)
Query: 270 GLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
GL+K L A +F LL SG+ Y+ LI ++ D R L +M + G
Sbjct: 332 GLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR--ELFADMNRRGC 389
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
++ K G +E+A +++E + + M+ K ++L
Sbjct: 390 PPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALL 449
Query: 389 IFREMQERLGSASVPAYHKIIEL-LCK-------AEETELTES--LMKEFVETGMKPLMP 438
+F EM ERLG H I L LC+ + +L E+ L+K + G P +
Sbjct: 450 LFNEM-ERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVV 508
Query: 439 SYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+Y L + ++ + D HL +C+P + L AG I++A E+ + M
Sbjct: 509 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM 568
Query: 498 -HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
S Q+ V T N ++ + +G +A ++ M
Sbjct: 569 VSSGQSPDVVTY--NTLVHGHCRAGQTERARELLSDM 603
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 148/350 (42%), Gaps = 26/350 (7%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRV-PS 214
R E + R + M++ + + T + D + + + K +++ D+++ +G V P+
Sbjct: 192 RCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPN 251
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNR---MIQLGGYQPRPSLHNSLFRALVSKPGGL 271
T++ L+ AY+ + +DE + + + + Y S+ S G +
Sbjct: 252 VFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATY--------SILIQWYSSSGDI 303
Query: 272 SKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEG 331
++AE IF + +E+ +YS +I N+ +R L EM Q
Sbjct: 304 -----EEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNM--KRAFALFDEMSQRDIVPN 356
Query: 332 KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFR 391
+++ K G +E AE L + + F M+ Y + G+ ++L +
Sbjct: 357 AHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQA 416
Query: 392 EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL--- 448
M+++ +A V Y+ + LCK + + ++ VE G+KP + ++ +Y
Sbjct: 417 IMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEG 476
Query: 449 NLGMHDRLHLAFSECLEKCR-PNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
NL +RL F + +K PN Y +++ +++A +I + M
Sbjct: 477 NLAEAERL---FRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEM 523
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 47/256 (18%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
+ RVC+ ++ + + + E I + + A + GE + F M E
Sbjct: 151 LFRVCSDNRLFDETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESN 210
Query: 398 G-SASVPAYHKIIELLCKAEETELTESLMKEFVETGM-KPLMPSYINLTNMYLNLGMHDR 455
V + +I++LC+ E E + LM E V G+ KP + +Y L N Y+ G DR
Sbjct: 211 KFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYV--GRKDR 268
Query: 456 LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILS 515
+ +EI M +Q + + + +I++
Sbjct: 269 --------------------------------KGVDEILKLMEKEQVV-FSVATYSILIQ 295
Query: 516 AYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRK--EVKKPVSLNLSSEQRE 573
Y SSGD +AEKI++ M K E++ + +S +R+ +K+ +L QR+
Sbjct: 296 WYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSM---ISWSRRLGNMKRAFALFDEMSQRD 352
Query: 574 -----NLIGLLLGGLC 584
+ G L+GG+C
Sbjct: 353 IVPNAHTYGALIGGVC 368
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 139/331 (41%), Gaps = 14/331 (4%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ + R D T+L +GK + + + F ++ +G P + + +I A
Sbjct: 287 MRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKA-- 344
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G LD+A ++ M L P +N++ +AL SK + + F + SG
Sbjct: 345 -GRLDDAIKLFEEMETLRCI-PSVVTYNTIIKALFE-----SKSRVSEISSWFERMKGSG 397
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ YS I + + E+ +L +EM + GF S++ K +
Sbjct: 398 ISPSPFTYS--ILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 455
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKII 409
A + + L E+ + ++ K G ++++F EM RLG + +V AY+ ++
Sbjct: 456 ANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMN-RLGCTPNVYAYNALM 514
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR-LHLAFSECLEKCR 468
L +A + + M+ + G P + SY + N G DR + + + +
Sbjct: 515 SGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIK 574
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
P+ Y L +L +AG E+A ++ M++
Sbjct: 575 PDAVSYNTVLGALSHAGMFEEAAKLMKEMNA 605
>gi|302817236|ref|XP_002990294.1| hypothetical protein SELMODRAFT_131439 [Selaginella moellendorffii]
gi|300141856|gb|EFJ08563.1| hypothetical protein SELMODRAFT_131439 [Selaginella moellendorffii]
Length = 1139
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 145/351 (41%), Gaps = 23/351 (6%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
+YE MM + T L ++ K + A +++D++ + S + + ++I Y
Sbjct: 329 MYEAMMSRGIVPSSVTYTTMLI-HLNKAERLADAALLWEDLVEESVELSPLAYALMITIY 387
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHN 285
G +EA ++ M+ GY P ++N + L G L +Y +A +F
Sbjct: 388 RKL---GRFEEALEVFEAMLG-AGYYPDSLIYNMVLHML----GKLGRY--DEAVDVFTA 437
Query: 286 LLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKE 345
+ L K Y+ ++ + D + +M++ +E V SV+ + K
Sbjct: 438 MQRQELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPVDE--VVYTSVISIYGKA 495
Query: 346 GDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
G ++AEK + + E + F K G++ +++++ E+ + + A+
Sbjct: 496 GLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDMAW 555
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-L 464
++ KA E K VE+G+ LM +Y ++ ++Y M + L F +
Sbjct: 556 KTLLHCYVKAGNVERATKTFKTLVESGIADLM-AYNDVLSLYAEFDMLEDAKLLFQQLKS 614
Query: 465 EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM--------HSDQTIGVNT 507
+P++ +G ++ NA + AEE+ M H Q I +N
Sbjct: 615 SSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKGFTPDHITQGILINA 665
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 6/156 (3%)
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G K+++ + + S+ Y +I + K+ T E + K+ G +P Y
Sbjct: 875 GRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVY 934
Query: 441 INLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+ N Y GM++ F L RP+ Y +++ AG KAE++ M
Sbjct: 935 SQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEM-- 992
Query: 500 DQTIGVNTRSCNIIL--SAYLSSGDFVKAEKIYDLM 533
G S +L SAY G +AE + M
Sbjct: 993 -AKAGCPPSSVTFLLLISAYAHRGKCNEAENALERM 1027
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
+++ V AK G DAEK + L + + M YAK G + + ++F M+ R
Sbjct: 901 TMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLR 960
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
+Y+ +I+ +A + E L+ E + G P +++ L + Y + G
Sbjct: 961 GLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRG 1015
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 91/190 (47%), Gaps = 2/190 (1%)
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
EG++++A + ++ + ++ + K G +L++ R+M+E+ ++ A
Sbjct: 175 EGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVA 234
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
Y II+ LCK L+ E V+ G+ P + +Y + + + +LG + + F+E +
Sbjct: 235 YTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMV 294
Query: 465 EK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
+ PN + I ++ L G + +A +F M + + N + N ++ Y +
Sbjct: 295 GRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAM-TKKGAEPNAYTYNALMDGYCLNNQM 353
Query: 524 VKAEKIYDLM 533
+A+K+ D+M
Sbjct: 354 DEAQKVLDIM 363
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 83/415 (20%), Positives = 164/415 (39%), Gaps = 86/415 (20%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M++ + + T + D + K+ D+ +++++G P +T+ ++ + S
Sbjct: 223 MEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSL-- 280
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTS 289
G L+EA ++N M+ G P + F LV GL K + +A +F +
Sbjct: 281 -GHLNEATILFNEMV---GRNVMP--NTVTFTILVD---GLCKEGMVSEARCVFEAMTKK 331
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL-LSVLRVCAKEGDV 348
G E Y+ L+ + + +D E ++VL + V + CA
Sbjct: 332 GAEPNAYTYNALMDGYCLNNQMD-----------------EAQKVLDIMVDKGCAP---- 370
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
++ S N + + Y K ++ + EM E+ + Y +
Sbjct: 371 ---------VVHSYNIL--------INGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTL 413
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKC 467
++ LC+ + +L KE +G+ P + +Y L + G + + L L S K
Sbjct: 414 MQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKI 473
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQ--------TIGV-------------- 505
P+ +Y I +E + AG +E A+E+F+ + +D TI +
Sbjct: 474 EPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYE 533
Query: 506 ------------NTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL 548
N+ S N+I+ +L + D A ++ D M K++ +S+ + L
Sbjct: 534 LFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQML 588
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 164/398 (41%), Gaps = 26/398 (6%)
Query: 108 PEQWRRA-KLAWLCKELPSHKGGTLVRILNAQKK-WLRQEDGTYLAVHCMRIREN--ETG 163
P+Q A + LCK GG +R+L K+ D TY + + ++ E
Sbjct: 225 PDQRVYALAITALCK---LGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEA 281
Query: 164 FRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIV 223
RV + M + + D +AT L ++ ++F + + G VP+++ + +LI
Sbjct: 282 LRVNDEM-RDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLI- 339
Query: 224 AYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIF 283
+GC + + + +L L S F + G L+ + A +F
Sbjct: 340 -------RGC--DQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLF 390
Query: 284 HNLLTSGLEIQKDI--YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+ SGL D+ Y+ LI H + +E ++L + M++AG + S+L
Sbjct: 391 EEMADSGLP---DVFTYNNLIHWHCQAHKL-REALNLFDR-MKKAGVKPSINTYNSLLMG 445
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSAS 401
K+G +++A K + + ++ M Y +F + + EM++ S +
Sbjct: 446 YCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCN 505
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
Y+ +I +C + + ++K F+ G P M +Y ++ N ++ GM +
Sbjct: 506 DYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQ 565
Query: 462 ECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
+ EK PN Y +++ G + A ++ N +
Sbjct: 566 QMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVR 603
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/350 (19%), Positives = 137/350 (39%), Gaps = 53/350 (15%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
+ K + ++FD + G PS T++ L++ Y +GC+DEA +Y+ M + G++
Sbjct: 413 QAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCK---KGCMDEAVKLYSEM-PMEGFK 468
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P + +L R G ++K A + + +G+ Y+ LI
Sbjct: 469 PNVVTYITLMR------GYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLI--------- 513
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
+ V RVC +G L+ S+ IPT
Sbjct: 514 ---------------------NGICMVDRVCEVDG--------MLKSFMSEGFIPT-MMT 543
Query: 372 YK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
Y + + K G + ++++M+E+ ++ Y I+ C+ +++ ++ +
Sbjct: 544 YNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVR 603
Query: 430 ETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIE 488
G++P + +Y L N + G M L L + PN +Y + KN ++
Sbjct: 604 RRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMK 663
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKY 538
+ + + M + +T + ++ + G+ A ++Y M K Y
Sbjct: 664 EVSKFYESMIKGGIVA-DTSTYTTLIDGFSKDGNVAFALELYSEMMAKGY 712
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 88/200 (44%), Gaps = 4/200 (2%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
EM+ G+ + +++ C KEG EDA + + + ++ + + A K+G
Sbjct: 182 EMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLG 241
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ ++L + REM+E Y ++++L K E + E + G K +
Sbjct: 242 DGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVAT 301
Query: 442 NLTNMY-LNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
L Y L + + L+L F E L + P + +YG+ + G +KA E+ M +
Sbjct: 302 TLMRGYCLRQEVGNALNL-FKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQM-T 359
Query: 500 DQTIGVNTRSCNIILSAYLS 519
Q + +T +++L L+
Sbjct: 360 GQGLLPSTFELSLVLKGLLN 379
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 161/360 (44%), Gaps = 35/360 (9%)
Query: 186 LADYMGKERKFAKCRDIFDDI--INQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
L + +G ++FA D ++ + + SE+ F ++ AY A + D A +NR
Sbjct: 117 LVEILGSCKQFAILWDFLTEMRESHHYEINSEI-FWLIFRAYSQANLP---DGAIRSFNR 172
Query: 244 MIQLGGYQPRPSLHN--SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
M + G +P++H+ L L + +++QA+ +FH + + YS L
Sbjct: 173 MDEFG---VKPTIHDLDKLLFILCKRK------HVKQAQQLFHQA-KNRFSLTAKTYSIL 222
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL----SVLRVCAKEGDVEDAEKTWLR 357
I + + D E+ ++ QA E+G V L ++L+ K G V++A+ +
Sbjct: 223 I--SGWGEIGDSEKAC----DLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHD 276
Query: 358 LLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
+L + AF Y + +Y + + + +M+ +V Y+ II+ LCK
Sbjct: 277 MLS--KRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKN 334
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTIY 474
E E L+ E + G+KP SY + + + +R L L F + C P+R Y
Sbjct: 335 EHVEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTY 394
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL-SSGDFVKAEKIYDLM 533
+ L+ L G +K E++ +M D+ + + ++++ + G +A K +++M
Sbjct: 395 NMVLKLLIRIGRFDKVTEVWENM-VDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMM 453
>gi|357519615|ref|XP_003630096.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524118|gb|AET04572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 635
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 153/390 (39%), Gaps = 40/390 (10%)
Query: 131 LVRILNAQKKWLRQEDGTYLAVHCMRIRENETG--------FRVYEWMMQQHWYRFDFAL 182
L++ LN K +R E HC + E E G V+ WM +Q WY D +
Sbjct: 68 LLKTLNKYVKLVRTE-------HCFLLFE-ELGKHDKWLQCLEVFRWMQRQRWYIADNGV 119
Query: 183 ATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYL-SAPVQGCLDEACSIY 241
+KL MGK+ + +F ++ N G P ++ LI A+L S L +A +
Sbjct: 120 YSKLISVMGKKGQIRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKSKALVKALGYF 179
Query: 242 NRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
+M +P +N L RA + Q ++F +L S + DIY+
Sbjct: 180 EKMKTTERCKPNIVTYNILLRAFAQARD------VNQVNYLFKDLDESS--VSPDIYTFN 231
Query: 302 IWLHSYQDN--IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
+ Y N I + L++ + Q + LL + K+ + E+ + L
Sbjct: 232 GVMDGYGKNGMIREMESVLVRMKSNQVKLDLITYNLL--IDSYGKKQQFDKMEQVFKSLS 289
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL----CKA 415
S P F + Y K K+ +F+ M + + S + +I + C +
Sbjct: 290 RSKEKPTLPTFNSMILNYGKARLKDKAENVFQNMTDMGYTPSFVTHESLIHMYGLCGCVS 349
Query: 416 EETELTESLMKEFVETGMKPLMPSYIN-LTNMYLNLGMHDRLHLAFSECLE-KCRPNRTI 473
EL + L++ V P+ S +N + ++Y G+ F+ K P+ T
Sbjct: 350 NAVELFDQLIESKV-----PIKVSTLNAMLDVYCINGLQQEADSLFTRAKSIKIFPDATT 404
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
Y + ++ A + E +++ M D I
Sbjct: 405 YKLLYKAYTKANSKELLDKLLKQMDKDSVI 434
>gi|255580313|ref|XP_002530985.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529437|gb|EEF31397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 753
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 126/279 (45%), Gaps = 14/279 (5%)
Query: 158 RENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMT 217
R +E + + W+ + ++ D K+ + +G+ K R I D+ +G E
Sbjct: 120 RNSEHALQFFRWVERAGLFKNDRDTHMKIIEILGRASKLNHARCILLDMPKKGVEWDEYM 179
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
F +LI +Y A G + EA I+N+M +LG + S +++LF+ ++ + +Y +
Sbjct: 180 FVVLIESYGKA---GIVQEAVKIFNKMNELGVERSIKS-YDALFKVILRR----GRYMM- 230
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
A+ +F+ +L G++ + Y+ ++W + ++ E +M+ G +
Sbjct: 231 -AKRVFNKMLNDGIQPTRHTYNIMLW--GFFLSLRLETAMRFYDDMKNRGISPDVVTYNT 287
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQER 396
++ + +E+AEK ++ ++ N PT ++ ++ Y + L + EM+
Sbjct: 288 MINGFYRFKKMEEAEKLFVE-MKGKNIAPTVISYTTMIKGYVAVDRVDDGLRLLEEMKSF 346
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+V Y ++ LC A + + ++ E V + P
Sbjct: 347 NIKPNVHTYSTLLPGLCDAWKMTEAKDILIEMVARHLAP 385
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 29/151 (19%), Positives = 66/151 (43%), Gaps = 2/151 (1%)
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
FV +E+Y K G ++++IF +M E S+ +Y + +++ + + + + + +
Sbjct: 180 FVVLIESYGKAGIVQEAVKIFNKMNELGVERSIKSYDALFKVILRRGRYMMAKRVFNKML 239
Query: 430 ETGMKPLMPSY-INLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIE 488
G++P +Y I L +L+L + + P+ Y + +E
Sbjct: 240 NDGIQPTRHTYNIMLWGFFLSLRLETAMRFYDDMKNRGISPDVVTYNTMINGFYRFKKME 299
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
+AE++F M + I S ++ Y++
Sbjct: 300 EAEKLFVEMKG-KNIAPTVISYTTMIKGYVA 329
>gi|125558386|gb|EAZ03922.1| hypothetical protein OsI_26055 [Oryza sativa Indica Group]
Length = 658
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 126/295 (42%), Gaps = 12/295 (4%)
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
+ ++L G +P ++N L LV+ GL L A +F + T +++ D+ S I
Sbjct: 211 KAMRLAGVEPSRLIYNCLLDGLVN--AGL----LDTAVNVFDAMSTED-QVRPDVVSYNI 263
Query: 303 WLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
+ Y + + ++ L + +QA K L++++ EG + + E
Sbjct: 264 LIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEER 323
Query: 362 D--NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
N IP A+V + A K G+ + + +F M +R +A+ Y +I+ + K +
Sbjct: 324 GMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREK 383
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYL 478
+L + ++G+K +Y + N G D F C EK N Y +
Sbjct: 384 EAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLI 443
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ AG +++++E+F M + + ++ N+++ SG A +Y M
Sbjct: 444 DGFGKAGMVDQSKELFEEMIAKGFVP-DSYCYNVLIDGLAKSGRMDDACALYKRM 497
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 111/272 (40%), Gaps = 18/272 (6%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
G V+E M+++ + A+ T L D MGK + + +F+ + + G +T+ +++
Sbjct: 350 GMAVFERMLKRGCAA-NAAIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIV 408
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
G LDEA + + R Q G + SL K G + Q++ +
Sbjct: 409 NCLCRF---GKLDEAVACF-RSCQEKGIAVNAIFYTSLIDGF-GKAG-----MVDQSKEL 458
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
F ++ G Y+ LI + +D L K M+ G ++ ++
Sbjct: 459 FEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDA--CALYKRMEDDGCDQTVYTYTILIDGL 516
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI--GEFMKSLEIFREMQERLGSA 400
KE E+A K W ++ D GI A ++ A G+F ++ I E+ +G
Sbjct: 517 FKEHKNEEALKFWDAMI--DKGITPTAAAFRTLASGLCLSGKFSRACRILDELAP-MGVI 573
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETG 432
A+ +I +LCKA + L V+ G
Sbjct: 574 PETAHEDMINVLCKAGRFKQACKLADGIVQKG 605
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 134/316 (42%), Gaps = 19/316 (6%)
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG 269
G VPS + ++ +++A A L A ++ M+ G P +N L RAL +
Sbjct: 111 GYVPSVLAYNAVLLALSDAS----LTSARRFFDSMLS-DGVAPNVYTYNILIRALCGRG- 164
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID-KERISLLKKEMQQAGF 328
+ ++A I ++ +G Y+ L+ +D ER L M G
Sbjct: 165 -----HRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAER---LVGMMLDGGL 216
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
+ S++ K G +EDA K + ++ ++ + Y K G ++L
Sbjct: 217 KPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALS 276
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+F EM ++ V + +I ++CKA E +L+++ E G++ ++ L + +
Sbjct: 277 VFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFC 336
Query: 449 NLGMHDRLHLAFSECLEKCR--PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN 506
G D LA + +CR P+ Y + G +++A E+ + M + + + +
Sbjct: 337 KKGFLDDALLAVRG-MRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEA-KGLKPD 394
Query: 507 TRSCNIILSAYLSSGD 522
+ + I+SAY + D
Sbjct: 395 VVTYSTIISAYCKNCD 410
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/329 (17%), Positives = 120/329 (36%), Gaps = 48/329 (14%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
MM + + + + M K K R +FD+++ +G P ++++ L+ Y A
Sbjct: 210 MMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKA- 268
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
GC EA S++ M Q G
Sbjct: 269 --GCSHEALSVFAEMTQKG----------------------------------------- 285
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
I D+ + +H + E L ++M++ G + + +++ K+G ++
Sbjct: 286 ---IMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLD 342
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
DA + + + + Y +G ++ E+ EM+ + V Y II
Sbjct: 343 DALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTII 402
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCR 468
CK +T L ++ +E G+ P +Y +L + H+ F ++ +
Sbjct: 403 SAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQ 462
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
P+ Y ++ GN+E+A + + M
Sbjct: 463 PDEFTYTSLIDGHCKEGNVERALSLHDKM 491
>gi|356511125|ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Glycine max]
Length = 503
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 112/301 (37%), Gaps = 44/301 (14%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
V+ WM +Q WY D + +KL MGK+ + +F ++ N G P ++ LI A+
Sbjct: 95 VFRWMQKQRWYIADNGIYSKLISVMGKKGQTRMAMWLFSEMRNTGCRPDTSVYNALITAH 154
Query: 226 L-SAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
L S L +A + +M + +P +N L RA ++Q +F
Sbjct: 155 LHSRDKTKALAKAIGYFQKMKGMERCKPNIVTYNILLRAFAQARN------VEQVNSLFK 208
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
+L S + DIY+ V+ K
Sbjct: 209 DLDES--IVSPDIYT-----------------------------------FNGVMDAYGK 231
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
G + + E R+ + F +++Y K EF K ++F+ + AS+P
Sbjct: 232 NGMIREMEAVLARMKSNQCKPDLITFNLLIDSYGKKQEFGKMEQVFKSLLRSKERASLPT 291
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
++ +I KA + E + K + G P ++ +L MY R F E +
Sbjct: 292 FNSMILNYGKARLKDKAEDVFKRMTDMGYTPSFVTHESLIYMYGFCDCVSRAAQLFDELV 351
Query: 465 E 465
E
Sbjct: 352 E 352
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 375 EAYAKIGEFMKSLEIFREMQ-ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
E AK +++ LE+FR MQ +R A Y K+I ++ K +T + L E TG
Sbjct: 81 EELAKHDNWLQCLEVFRWMQKQRWYIADNGIYSKLISVMGKKGQTRMAMWLFSEMRNTGC 140
Query: 434 KPLMPSYINLTNMYLNLGMHDR-----LHLAFS-----ECLEKCRPNRTIYGIYLESLKN 483
+P Y N + +H R L A + +E+C+PN Y I L +
Sbjct: 141 RPDTSVY----NALITAHLHSRDKTKALAKAIGYFQKMKGMERCKPNIVTYNILLRAFAQ 196
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
A N+E+ +F + + + + + N ++ AY +G
Sbjct: 197 ARNVEQVNSLFKDL-DESIVSPDIYTFNGVMDAYGKNG 233
>gi|125534241|gb|EAY80789.1| hypothetical protein OsI_35969 [Oryza sativa Indica Group]
Length = 515
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 138/323 (42%), Gaps = 29/323 (8%)
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGG- 270
+PS T+ IL S G L++A + + M++ G P P ++ + V+ G
Sbjct: 60 LPSPTTYRILA---RSLAENGKLEQAIELKDGMLERGLVAPDPQVYALVMGGFVNAGDGD 116
Query: 271 -LSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
+ Y + E + + G+ +Y L+ + + + +D E + + +
Sbjct: 117 TVVSLYEELVEKLGGGQILDGM-----VYGNLMNGY-FLNGMDNEALHCYAEVLG----- 165
Query: 330 EGKEVLLS------VLRVCAKEGDVEDAEKTWLRLLESDN-----GIPTPAFVYKMEAYA 378
EG +V VL + G ++DA + + R+ E + + +F ++AY
Sbjct: 166 EGSKVRFGAVSYNMVLDALGRNGKLDDALQLFDRMCEEHDPPRRIAVNLGSFNVMVDAYC 225
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
+ F ++E+F +M E+ + +Y+ +I+ L K E E L KE E G+ P
Sbjct: 226 RAERFQDAIEVFGKMGEKRCAPDALSYNNLIDWLGKNELVGEAEQLYKEMGERGVNPDEY 285
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+Y+ L + D F++ + RPN + + L +++A+ F+ M
Sbjct: 286 TYVLLIESCFKVDRVDDSVAYFNKMFDAGLRPNANAFNKVIGGLVKVDRLDEAQGFFDKM 345
Query: 498 HSDQTIGVNTRSCNIILSAYLSS 520
++ + N S ++L AY+ +
Sbjct: 346 -PEKEVKPNIGSYELLLRAYIDA 367
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 101/498 (20%), Positives = 191/498 (38%), Gaps = 84/498 (16%)
Query: 106 ELPEQWRRAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETG-- 163
EL ++ + LC + S +L+R + A W+ E GT+ +V ++E
Sbjct: 72 ELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAG-WIPPE-GTFTSVITACVKEGNVAEA 129
Query: 164 FRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIV 223
R+ + M+ + A+AT L + + ++I G VP+++T+ +LI
Sbjct: 130 LRLKDDMVNC-GKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLID 188
Query: 224 AYLSAPVQGCLDEACSIYNRMIQLG-------------GYQPRPSLHNSLFRALVSKPGG 270
G +++A Y+ M G GY S N+ + G
Sbjct: 189 GCCK---NGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG 245
Query: 271 LSKYY--------------LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERI 316
L+ + + +A ++ ++ G+ Y+ +I H +DNI+
Sbjct: 246 LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAA-- 303
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA------- 369
+ KEM GF ++ K+GD+E+A + R+ ++ N +PT
Sbjct: 304 CKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA-NILPTDTTLGIIIK 362
Query: 370 -----------------FVYK------------MEAYAKIGEFMKSLEIFREMQERLGSA 400
FV + ++ + K G + ++REM E +
Sbjct: 363 GLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITP 422
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
S Y +I+ CK +L L+ + G+K + +Y L + + H
Sbjct: 423 STVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAH--- 479
Query: 461 SECLEKCR-----PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILS 515
E L + R PNR IY + KN N+E+A +++ M ++ I + ++ ++
Sbjct: 480 -ELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM-VNEGIPCDLKTYTSLID 537
Query: 516 AYLSSGDFVKAEKIYDLM 533
L SG + A I+ M
Sbjct: 538 GLLKSGRLLYASDIHTEM 555
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 134/325 (41%), Gaps = 19/325 (5%)
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL 271
PS +IL+ A + + C EA ++N+M+ +G +LH + RA L
Sbjct: 2 TPSIQCMNILLTAMVRKNMT-C--EARELHNKMLLVGVTGDCFTLH-VMLRAC------L 51
Query: 272 SKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEG 331
+ + +AE F G+E+ ++ YS + L + N +SLL+ EM+ AG+
Sbjct: 52 KEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPN-SGYALSLLR-EMRAAGWIPP 109
Query: 332 KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFR 391
+ SV+ C KEG+V +A + ++ + M+ Y G +L +
Sbjct: 110 EGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVN 169
Query: 392 EMQERLGSASVP---AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
E+ E S VP Y +I+ CK E E G++ + S ++ YL
Sbjct: 170 EISE---SGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL 226
Query: 449 NLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTR 508
F++ LE N + L L G + +A +++ + + + I N
Sbjct: 227 KCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIA-KGISPNVV 285
Query: 509 SCNIILSAYLSSGDFVKAEKIYDLM 533
S N I+ + + A K+Y M
Sbjct: 286 SYNNIILGHCRKDNINAACKVYKEM 310
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 143/351 (40%), Gaps = 14/351 (3%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L D K + + D+++ QG VP + + ++V L + + EA + R
Sbjct: 332 TCLIDGTCKAGRLDDAIVLLDEMVRQG-VPLNVVTYTVLVDGLCKERK--VAEAEDVL-R 387
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M++ G + L+ +L G ++A + + GLE+ +Y LI
Sbjct: 388 MMEKAGVRANELLYTTLIH------GHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQ 441
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+D+ + SLL K M ++G E + +++ C K G V +A ++L+S
Sbjct: 442 GLCNVHKLDEAK-SLLTK-MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
+ ++ K G +++ F +M++ +V AY +++ LCK
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLK 482
L E V GM Y L + YL G +HD L + + Y ++
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 619
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
N + +A E+F+ M I + N ++S Y G+ +A + D M
Sbjct: 620 NLNMMPEAREVFSEMIG-HGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 105/494 (21%), Positives = 198/494 (40%), Gaps = 64/494 (12%)
Query: 93 HLGEPVVEVIELEELPEQWRRAKLAWLCKELPS--HKGGTL---VRILNAQKKWLRQEDG 147
HL +V+++ L RR+ LA + L S G L VR + A+ + LR
Sbjct: 98 HLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAV-ARVRELRVPPN 156
Query: 148 TYLAVHCM-RIRENETGF---RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIF 203
T H + R+ + +G R++E + + + F+ + D++ KE + A+ R +F
Sbjct: 157 TRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVI-----DFLCKEGELAEARSLF 211
Query: 204 DDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRA 263
+ G +P +TF+ LI Y G LDE + M + G + +N+L
Sbjct: 212 SRMKEMGCLPDVVTFNSLIDGYGKC---GELDEVEQLVEEM-RRSGCKADVVTYNALINC 267
Query: 264 LVSKPGGLSKYY------------------------------LQQAEFIFHNLLTSGLEI 293
K G + Y +++A +F + G+ +
Sbjct: 268 F-CKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMAL 326
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
+ Y+ LI +D + L EM + G ++ KE V +AE
Sbjct: 327 NEFTYTCLIDGTCKAGRLDDAIV--LLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAED 384
Query: 354 TWLRLLESDNGIPTPAFVYKMEAYAKIGEFM-----KSLEIFREMQERLGSASVPAYHKI 408
LR++E G+ +Y + G FM K+L + EM+ + + Y +
Sbjct: 385 V-LRMMEK-AGVRANELLYTTLIH---GHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC- 467
I+ LC + + +SL+ + E+G++P Y + + G + L+
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
+PN Y ++ L AG+I++A FN M D + N ++ ++ +G +A
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMR-DLGLDPNVQAYTALVDGLCKNGCLNEAV 558
Query: 528 KIYDLMCLKKYEIE 541
++++ M K ++
Sbjct: 559 QLFNEMVHKGMSLD 572
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 129/308 (41%), Gaps = 27/308 (8%)
Query: 235 DEACSIYNRMIQLGGYQPRPSL--HNSLFRALVS-KPGGLSKYYLQQAEF--IFHNLLTS 289
D+A ++ MI+ +P PSL + F + S K L + ++ E I HN+ T
Sbjct: 47 DDAIDLFQEMIR---SRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYT- 102
Query: 290 GLEIQKDIYSGLI-WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
L I + + +Y S+L K M+ G+E +++ E V
Sbjct: 103 -LNIMINCFCRCCKTCFAY---------SVLGKVMK-LGYEPDTTTFNTLINGLCLESKV 151
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
+A R++E NG Y + K G+ +L++ R+M ER A V Y
Sbjct: 152 SEAVVLVARMVE--NGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYS 209
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM-HDRLHLAFSECLE 465
II+ LC+ + SL KE G+K + +Y +L G +D + L
Sbjct: 210 TIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSR 269
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
K PN + + ++ G +++A E++ M + + I NT + N ++ Y +
Sbjct: 270 KIIPNVITFNVLIDVFVKEGKLQEANELYKEMIT-KGISPNTITYNSLMDGYCMQNRLSE 328
Query: 526 AEKIYDLM 533
A + DLM
Sbjct: 329 ANNMLDLM 336
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 128/302 (42%), Gaps = 23/302 (7%)
Query: 232 GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG----GLSKYYLQQAEFIFHNLL 287
GC+D A S++ M + G + +NSL L K G G+ + I N++
Sbjct: 219 GCIDAAISLFKEM-ETKGIKSSLVTYNSLVGGLC-KAGKWNDGVQLLKDMTSRKIIPNVI 276
Query: 288 TSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGD 347
T + I + G + + + L KEM G S++ +
Sbjct: 277 TFNVLIDVFVKEGKL-----------QEANELYKEMITKGISPNTITYNSLMDGYCMQNR 325
Query: 348 VEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
+ +A L L+ +N P F ++ Y K+ + +++FR++ +R A+ Y
Sbjct: 326 LSEANN-MLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYS 384
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK 466
+++ C++ + E+ E L +E V G+ P + +Y L + + G ++ L E L+K
Sbjct: 385 ILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEK-ALEIFEDLQK 443
Query: 467 CRPNRTI--YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFV 524
+ N I Y I +E + G +E A +F + + + N + +++S G
Sbjct: 444 SKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPC-KGVKPNVMTYTVMISGLCKKGSLS 502
Query: 525 KA 526
+A
Sbjct: 503 EA 504
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 155/336 (46%), Gaps = 24/336 (7%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + + K+ ++ + D++ +G +P+E+T++ LI ++G L++A S+ +RM+
Sbjct: 275 LINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLC---LKGKLEKAISLLDRMV 331
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
P + ++ LV + L + + G + + +YS LI
Sbjct: 332 S-SKCVPNVVTYGTIINGLVKQGRAL------DGACVLALMEERGYCVNEYVYSTLIS-G 383
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+++ +E + L K EM G+E V +V+ ++G +DA + + ++ G
Sbjct: 384 LFKEGKSQEAMHLFK-EMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEM--TNKGC 440
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
A+ M+ + + G +++E++++M + + + Y +I LCK + ++ E+
Sbjct: 441 TPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCK--DGKVKEA 498
Query: 424 LM--KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL---EKCRPNRTIYGIYL 478
+M + + G KP + +Y ++ N G+ + ++E L +P+ Y I L
Sbjct: 499 MMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILL 558
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
+L +I +A ++ N M D+ + +C I L
Sbjct: 559 NTLCKQSSISRAIDLLNSML-DRGCDPDLVTCTIFL 593
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 10/211 (4%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKSLEIFREM 393
SVL V +EG A + + ++ + +P F ++A K+G ++++FR+M
Sbjct: 166 SVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDM 225
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
R V Y +++ LCKA+ + SL+ E G P ++ L N G
Sbjct: 226 TIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDL 285
Query: 454 DR-LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI 512
R L + L+ C PN Y + L G +EKA + + M S + + N +
Sbjct: 286 SRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVP-NVVTYGT 344
Query: 513 ILSAYLSSGDFVKAEKIYDLM-----CLKKY 538
I++ + G + + LM C+ +Y
Sbjct: 345 IINGLVKQGRALDGACVLALMEERGYCVNEY 375
>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 136/324 (41%), Gaps = 26/324 (8%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
++F+++ G VP +TF L+ A +A G D A S + M+Q G+ LH +
Sbjct: 273 ELFEEMEKLGIVPDRITFTGLVSATTAA---GLWDRAQSFID-MMQARGFSI--GLHEYI 326
Query: 261 ----FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERI 316
A KP ++A +F +L G E++ + Y+ L L +Y+ E
Sbjct: 327 EMQWACARARKP--------REAYGLFQVMLEQGYELKLESYNAL--LCAYERTAQWEDA 376
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEA 376
+Q G S++ CA G E A + R+ SD ++ ++A
Sbjct: 377 MRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEVLERMKTSDCQPNVVSWCGLLKA 436
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
Y K G + K+ EIF M + + A+ ++ K + + +++ E GMK
Sbjct: 437 YQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLD 496
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
+ ++ + G + F + + C PN Y +++ + G EKAE +F
Sbjct: 497 VVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYGDVGLWEKAESVFK 556
Query: 496 HMHSDQTIGV--NTRSCNIILSAY 517
M +G+ N ++C +L AY
Sbjct: 557 LMLR---VGIRPNPQACCALLRAY 577
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 150/364 (41%), Gaps = 39/364 (10%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKER--KFAKCRDIFDDIINQGR 211
C R R+ + +++ M++Q ++ L + A ER ++ F I ++G
Sbjct: 332 CARARKPREAYGLFQVMLEQG---YELKLESYNALLCAYERTAQWEDAMRTFIWIQDKGL 388
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL 271
P M++ LI A +A G + A + RM + QP L +A K G
Sbjct: 389 TPDVMSWSSLISACANA---GQAERALEVLERM-KTSDCQPNVVSWCGLLKAY-QKTGNW 443
Query: 272 SKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEG 331
K AE IFH +L SG + + L L +Y+ +++ +++++ G +
Sbjct: 444 EK-----AEEIFHAMLDSGCPPNEVAWCSL--LSAYEKGRQWKKVLYTIEKLEELGMKLD 496
Query: 332 KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFR 391
+ + AK G E AE+ + ++ +S + ++AY +G + K+ +F+
Sbjct: 497 VVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYGDVGLWEKAESVFK 556
Query: 392 EMQERLGSASVP-AYHKIIELLCKAEETE----LTESLMKEFVETGMKPLMPSYINLTNM 446
M R+G P A ++ K +E E ES+ ++ G++P +Y +
Sbjct: 557 LML-RVGIRPNPQACCALLRAYGKGKELEKVIIFFESMEPQY---GVEPDKYAYAAIFWA 612
Query: 447 YLNLG-------MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
G DR+ +A C P+ IY + + G I+KA ++ M S
Sbjct: 613 CWTCGEWQRAVKYIDRMEMA------GCTPDSVIYTTLINMYEANGQIDKAMQVLERMGS 666
Query: 500 DQTI 503
I
Sbjct: 667 GSLI 670
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 22/273 (8%)
Query: 270 GLSKYYL-QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID-KERISLLKKEMQQAG 327
GL K L +AE +F ++ +G++ D Y+ LI H Y KE + +L+K M G
Sbjct: 216 GLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLI--HGYLSIGKWKEVVQMLEK-MSARG 272
Query: 328 FEEGKEVLLSVLR-VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFM 384
+ S+L +CA +E L +NG+ ++ + AYAK G
Sbjct: 273 LKPDCYTYGSLLNYLCAL------SEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMID 326
Query: 385 KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT 444
K+++IF +M++ S +V Y +I+ LCK + E + + G+ P + + +L
Sbjct: 327 KAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLV 386
Query: 445 NMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQT 502
+ +R E L++ C PN + + +L N G + + + + M +
Sbjct: 387 YGLCTVDKWERAEELVYEMLDQGIC-PNAVFFNTLICNLCNVGRVMEGRRLIDLM---EH 442
Query: 503 IGV--NTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+GV + S ++S Y +G +AEK++D M
Sbjct: 443 VGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGM 475
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 124/342 (36%), Gaps = 53/342 (15%)
Query: 203 FDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFR 262
D ++ G P F+I AY G +D+A I+N+M Q G P + +L
Sbjct: 297 LDLMVENGLSPDHHIFNIFFSAYAKC---GMIDKAMDIFNKMRQ-HGLSPNVVNYGALID 352
Query: 263 ALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK-ERISLLKK 321
AL K G + AE F+ ++ G+ +++ L++ +DK ER L
Sbjct: 353 AL-CKLG-----RVDDAEVKFNQMINEGVTPNIVVFNSLVYGLC---TVDKWERAEELVY 403
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEA-YAKI 380
EM G +C P F + +
Sbjct: 404 EMLDQG-------------IC-----------------------PNAVFFNTLICNLCNV 427
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G M+ + M+ +Y +I C A T+ E + V G+ P +Y
Sbjct: 428 GRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTY 487
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
L + Y + D + F E L K P Y L L +A+E++ +M +
Sbjct: 488 NTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMIN 547
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIE 541
T + + NIIL+ S +A K++ +C K ++
Sbjct: 548 SGT-KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLN 588
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 42/152 (27%)
Query: 385 KSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
++LE+ R M G + P Y +I+ LCKA+ + E + ++ ++ G+KP +Y
Sbjct: 187 EALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYN 246
Query: 442 NLTNMYLNLG------------------------------------MHDRLHLAFSECLE 465
L + YL++G MH L L L
Sbjct: 247 CLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLS 306
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
P+ I+ I+ + G I+KA +IFN M
Sbjct: 307 ---PDHHIFNIFFSAYAKCGMIDKAMDIFNKM 335
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 156/401 (38%), Gaps = 49/401 (12%)
Query: 156 RIRENETGFRVY-EWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
RI E E+ FR M + Y ++ + D K K +++ +++ G +P+
Sbjct: 243 RISEAESMFRTMRNSGMLPNLYTYN-----TMMDGYCKIAHVKKALELYXEMLGDGLLPN 297
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSL--HNSLFRALVSKPGGLS 272
+TF ILI DE S +I + + P++ +N L K G LS
Sbjct: 298 VVTFGILIDGLCKT------DEMVSARKFLIDMASFGVVPNIFVYNCLIDGYC-KAGNLS 350
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ +E H EI D+++ I + E L +EM++ GF
Sbjct: 351 EALSLHSEIEKH-------EILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
+++ KEG++E A + ++ E F ++ Y K G+ ++ ++ E
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
M + V AY +I+ K T+ L KE E G L P+ L+ + L
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG---LHPNVFTLSCLIDGLCK 520
Query: 453 HDRLHLAFSECLEK-----------------CRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
R+ A L K C PN +Y ++ L G I KA + F+
Sbjct: 521 DGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFS 580
Query: 496 HMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
M + + +C +I+ + +A + D+M L+
Sbjct: 581 DMRC-SGLRPDVFTCIVIIQGHF------RAMHLRDVMMLQ 614
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 144/337 (42%), Gaps = 35/337 (10%)
Query: 175 WYRFDFALATK----LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
+Y+ D A + + D + K+ +F ++ D++ +G P+ +T+ LI
Sbjct: 149 YYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCR--- 205
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
QG +A +++ MI+ + P ++ L R L + + +AE +F + SG
Sbjct: 206 QGDFLKAFRLFDEMIEKKIF-PTVVIYTILIRGLCGES------RISEAESMFRTMRNSG 258
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKE-RISLLKKEMQQAGFEEGKEVLLSVLRV------CA 343
+ L L++Y +D +I+ +KK ++ G +L +V+
Sbjct: 259 M---------LPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLC 309
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSAS 401
K ++ A K + + + G+ FVY ++ Y K G ++L + E+++
Sbjct: 310 KTDEMVSARKFLIDM--ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPD 367
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
V Y +I+ LC + E + L++E + G P +Y L + Y G ++ S
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCS 427
Query: 462 ECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ EK PN + ++ AG +E A ++ M
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 126/302 (41%), Gaps = 25/302 (8%)
Query: 144 QEDGTYLAVHCMRIRENE--------TGFRVYEWMMQQHWYRFDFALATKLADYMGKERK 195
QE G + +H N+ F+V++ M ++ + L + +E K
Sbjct: 260 QEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEM-RERGVSCNIVTYNTLIGGLCREMK 318
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS 255
+ ++ D + + G P+ +T++ LI + G C R ++ G P
Sbjct: 319 ANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLC----RDLKSRGLSPSLV 374
Query: 256 LHNSLFRALVSK--PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
+N L K G K + E G++ K Y+ LI + DN+
Sbjct: 375 TYNILVSGFCKKGDTSGAGKVVKEMEE--------RGIKPSKVTYTILIDTFARSDNM-- 424
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
E+ L+ M++ G ++ +G + +A + + ++E +
Sbjct: 425 EKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTM 484
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ Y K G ++L +FREM+E+ +V +Y +IE+LCK +++ E L+++ +++G+
Sbjct: 485 VLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGI 544
Query: 434 KP 435
P
Sbjct: 545 GP 546
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 135/319 (42%), Gaps = 19/319 (5%)
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
+ ++I AY+ + LD + +N M+ G+ P + N+L +V G S +
Sbjct: 97 YEVIINAYVQSQ---SLDSSIYYFNEMVD-KGFVPGSNCFNNLLTFVV----GSSSF--- 145
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
+ F N S +++ D+YS I + + + E+ L E+++ GF + +
Sbjct: 146 NQWWCFFN--ESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTT 203
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA--KIGEFMKSLEIFREMQE 395
++ C K+G++E A+ + + G+ + Y + + K G + E++ +MQE
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEM--GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQE 261
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT-NMYLNLGMHD 454
++ Y+ ++ LCK T+ + E E G+ + +Y L + + ++
Sbjct: 262 HGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANE 321
Query: 455 RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
+ + PN Y ++ + KA + + S + + + + NI++
Sbjct: 322 ANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKS-RGLSPSLVTYNILV 380
Query: 515 SAYLSSGDFVKAEKIYDLM 533
S + GD A K+ M
Sbjct: 381 SGFCKKGDTSGAGKVVKEM 399
>gi|255544107|ref|XP_002513116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548127|gb|EEF49619.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1128
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 161/397 (40%), Gaps = 48/397 (12%)
Query: 165 RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
+ + W +Q YR +FA A + + F + + + +QG+ P+E F ILI
Sbjct: 579 QFFHWAGKQKGYRHNFASYNAYAYCLNRSSFFRAADQLPELMDSQGKPPTEKQFEILIRM 638
Query: 225 YLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
+ A +G +Y +M + G +PR L+N + AL+ +L A ++
Sbjct: 639 HSDAN-RGL--RVYHVYQKMKKFG-VKPRAFLYNRIMDALIKTA------HLDLALVVYD 688
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
+ + GL Y LI ID+ + + +EM++ G +V+ K
Sbjct: 689 DFKSDGLVEDSVTYMILIKGLCKFGRIDE--MMEVWEEMKRDGVNPDVMAYATVVTGLCK 746
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
G V + + + + E+ I + +EA+ K G+ + ++ + + + A +
Sbjct: 747 GGRVAEGYELFKEMKENKVLIDRAIYGVLIEAFVKDGKIGSACDLLQGLVDSGYRADLGI 806
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMK-------PLMPSYINLTNM----------- 446
Y+ +IE LC + + L + V+ G++ P++ SY + M
Sbjct: 807 YNSLIEGLCNVKRVDKARKLFQIMVQEGLELDFKTVNPMLVSYAEMKRMDEFCKLLVQME 866
Query: 447 YLNLGMHDRLHLAFS-------------ECLEKCRP----NRTIYGIYLESLKNAGNIEK 489
L + D + FS E E+ + + IY +E+L G + K
Sbjct: 867 RLGFSVMDDISKLFSFLVRREEIITLALEVFEELKVKGYISVLIYNTLMEALLKVGEVRK 926
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
A +F+ M D ++ + +I + ++ G+ +A
Sbjct: 927 ALSLFSEM-KDLNCEPDSNTYSIAVICFVEDGNIQEA 962
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 145/349 (41%), Gaps = 32/349 (9%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K + A+ ++F ++ + + +LI A++ G + AC + ++ GY+
Sbjct: 746 KGGRVAEGYELFKEMKENKVLIDRAIYGVLIEAFVK---DGKIGSACDLLQGLVD-SGYR 801
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
++NSL L + + +A +F ++ GLE+ + + L SY +
Sbjct: 802 ADLGIYNSLIEGLCNVK------RVDKARKLFQIMVQEGLELDFKTVNPM--LVSYAEMK 853
Query: 312 DKERISLLKKEMQQAGFEEGKEV--LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
+ L +M++ GF ++ L S L + ++ L+ I
Sbjct: 854 RMDEFCKLLVQMERLGFSVMDDISKLFSFL---VRREEIITLALEVFEELKVKGYISVLI 910
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM--KE 427
+ MEA K+GE K+L +F EM++ Y I ++C E+ + E+ + +
Sbjct: 911 YNTLMEALLKVGEVRKALSLFSEMKDLNCEPDSNTYS--IAVICFVEDGNIQEACVCHNK 968
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGIYLESLKNAG 485
+E P + +Y +LT ++G D + +CL P Y + + + +G
Sbjct: 969 IIEMSSVPSVAAYCSLTKGLCDIGEIDEAMMLVRDCLGNVTSGPMEFKYTLTVLHVCRSG 1028
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSS----GDFVKAEKIY 530
+ EK E+ N M + N +ILSA +S G +A K++
Sbjct: 1029 DAEKVIEVLNEMMHE-----NCPPNEVILSAIISGMCKHGTLEEARKVF 1072
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 122/283 (43%), Gaps = 19/283 (6%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ TF +I + + G + A I++ M++ G P N+L LV K
Sbjct: 546 PTTRTFMPIIHGFARS---GDMRRALEIFD-MMRWSGCIPTVHTFNALILGLVEK----- 596
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+++A I + +G+ + Y+ + +H Y D + +++ G E
Sbjct: 597 -CQMEKAVEILDEMSLAGISPNEHTYTTI--MHGYASLGDTGKAFEYFTKLKTEGLELDV 653
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIF 390
++L+ C K G ++ A + S IP FVY + + +A+ G+ ++ E+
Sbjct: 654 YTYEALLKACCKSGRMQSALAVTREM--SSQKIPRNTFVYNILIDGWARRGDVWEAAELM 711
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
++M++ + Y I CKA + + ++E G+KP + +Y L + +
Sbjct: 712 QQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARA 771
Query: 451 GMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEE 492
+ ++ F E +P++ +Y + SL + ++ AEE
Sbjct: 772 SLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASV--AEE 812
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 148/363 (40%), Gaps = 23/363 (6%)
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
R +F L + Y + R F+ + +G P+ + LI AY V ++E
Sbjct: 268 RKEFGL---MVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYA---VGRDMEE 321
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSL--FRALVSKPGGLSKYY-LQQAEFIFHNLLTSGLEI 293
A S +M + G + SL + LV GG +K + A+ F +
Sbjct: 322 ALSCVRKMKEEG-------IEMSLVTYSILV---GGFAKIADAEAADHWFKEAKERHTTL 371
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
IY +I+ H N+ + L +EM++ G + ++ +++ G+ E
Sbjct: 372 NAIIYGNIIYAHCQACNMTQAEA--LVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLI 429
Query: 354 TWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
+ RL E ++ + Y KIG+ K+LE+ + M+ ++ Y +I
Sbjct: 430 VFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFV 489
Query: 414 KAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRT 472
+ ++ ++ ++ V+ G+KP + Y N+ + +G DR E E+ RP
Sbjct: 490 RLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTR 549
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDL 532
+ + +G++ +A EIF+ M I + N ++ + KA +I D
Sbjct: 550 TFMPIIHGFARSGDMRRALEIFDMMRWSGCIPT-VHTFNALILGLVEKCQMEKAVEILDE 608
Query: 533 MCL 535
M L
Sbjct: 609 MSL 611
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 137/337 (40%), Gaps = 49/337 (14%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
KC +FD + G PS +++ LI Y+ G + +A + ++M+++ G + +
Sbjct: 426 KCLIVFDRLKECGFTPSVISYGCLINLYIKI---GKVSKALEV-SKMMEVAGIKHNMKTY 481
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
+ L V L + A +F +++ GL+ +Y+ +I N+D+ +
Sbjct: 482 SMLINGFVR----LKDW--ANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRT 535
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
+ KEMQ+ E T T F+ + +
Sbjct: 536 V--KEMQK-----------------------ERHRPT------------TRTFMPIIHGF 558
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
A+ G+ ++LEIF M+ +V ++ +I L + + E ++ E G+ P
Sbjct: 559 ARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNE 618
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+Y + + Y +LG + F++ E + Y L++ +G ++ A +
Sbjct: 619 HTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTRE 678
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M S Q I NT NI++ + GD +A ++ M
Sbjct: 679 M-SSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQM 714
>gi|125606474|gb|EAZ45510.1| hypothetical protein OsJ_30168 [Oryza sativa Japonica Group]
Length = 651
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 126/295 (42%), Gaps = 12/295 (4%)
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
+ ++L G +P ++N L LV+ GL L A +F + T +++ D+ S I
Sbjct: 256 KAMRLAGVEPSRLIYNCLLDGLVN--AGL----LDTAVNVFDAMSTED-QVRPDVVSYNI 308
Query: 303 WLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
+ Y + + ++ L + +QA K L++++ EG + + E
Sbjct: 309 LIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEER 368
Query: 362 D--NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
N IP A+V + A K G+ + + +F M +R +A+ Y +I+ + K +
Sbjct: 369 GMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREK 428
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYL 478
+L + ++G+K +Y + N G D F C EK N Y +
Sbjct: 429 EAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLI 488
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ AG +++++E+F M + + ++ N+++ SG A +Y M
Sbjct: 489 DGFGKAGMVDQSKELFEEMIAKGFV-PDSYCYNVLIDGLAKSGRMDDACALYKRM 542
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 18/255 (7%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
G V+E M+++ + A+ T L D MGK + + +F+ + + G +T+ +++
Sbjct: 395 GMAVFERMLKRGCAA-NAAIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIV 453
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
G LDEA + + R Q G + SL K G + Q++ +
Sbjct: 454 NCLCRF---GKLDEAVACF-RSCQEKGIAVNAIFYTSLIDGF-GKAG-----MVDQSKEL 503
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
F ++ G Y+ LI + +D L K M+ G ++ ++
Sbjct: 504 FEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDA--CALYKRMEDDGCDQTVYTYTILIDGL 561
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI--GEFMKSLEIFREMQERLGSA 400
KE E+A K W ++ D GI A ++ A G+F ++ I E+ +G
Sbjct: 562 FKEHKNEEALKFWDAMI--DKGITPTAAAFRTLASGLCLSGKFSRACRILDELAP-MGVI 618
Query: 401 SVPAYHKIIELLCKA 415
A+ +I +LCKA
Sbjct: 619 PETAHEDMINVLCKA 633
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
Length = 1080
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 126/293 (43%), Gaps = 19/293 (6%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIY-NRM 244
L D MGK + + + +++ +G + +T++ +I + + L++A +Y N M
Sbjct: 796 LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRR---LEQAIDLYYNLM 852
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
Q G+ P P + L L L ++ AE +F+ +L G + IY+ L+
Sbjct: 853 SQ--GFSPTPCTYGPLLDGL------LKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 904
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
H N E++ L ++M G + ++ K G + D + +LLE G
Sbjct: 905 HRIAGN--TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM--G 960
Query: 365 IPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+ Y + + K +++ +F EMQ++ ++ Y+ +I L KA +
Sbjct: 961 LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAG 1020
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIY 474
+ +E + G KP + +Y L Y G D + A+ + C PN + Y
Sbjct: 1021 KMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTY 1073
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 4/157 (2%)
Query: 370 FVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
F Y + +A K + L++ EM + ++ Y+ II L K+ E L
Sbjct: 791 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 850
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGN 486
+ G P +Y L + L G + F+E LE C+ N TIY I L + AGN
Sbjct: 851 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 910
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
EK +F M DQ I + +S II+ +G
Sbjct: 911 TEKVCHLFQDM-VDQGINPDIKSYTIIIDTLCKAGQL 946
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 77/399 (19%), Positives = 161/399 (40%), Gaps = 46/399 (11%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ Y + T + D + + + + ++FD++ +G VP + +++ LI +L A
Sbjct: 326 MKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADR 385
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG----GLSKYYLQQAEFIFHNL 286
G +A ++ M + G +P H LF K G + +Y L +++ I ++
Sbjct: 386 FG---DALELFKHM-DIHGPKPNGYTH-VLFINYYGKSGESIKAIQRYELMKSKGIVPDV 440
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK---EMQQAGFEEGKEVLLSVLRVCA 343
+ + SG R+ + K+ E++ G +++ C+
Sbjct: 441 VAGNAVLFGLAKSG--------------RLGMAKRVFHELKAMGVSPDTITYTMMIKCCS 486
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKM-EAYAKIGEFMKSLEIFREMQERLGSASV 402
K ++A K + ++E +N +P V + + K G ++ IF +++E +
Sbjct: 487 KASKFDEAVKIFYDMIE-NNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTD 545
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN-MYLNLGMHDRLHLAFS 461
Y+ ++ L + + + L++E + P + +Y + + + N ++D L + +S
Sbjct: 546 GTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYS 605
Query: 462 ECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH---------------SDQTIGVN 506
+ C P+ + Y + L +A IF M S IG+
Sbjct: 606 MTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLM 665
Query: 507 TRSCNIILSAYLSSGDFVKAEKIYDLM--CLKKYEIESA 543
+ +II +L G + LM LKK IE +
Sbjct: 666 KEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKS 704
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 85/194 (43%), Gaps = 2/194 (1%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
+++V G + DA+ + ++ +SD ++ ++ + G+ +EI+ M+
Sbjct: 271 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 330
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRL 456
+ +V AY +I+ LC+ + E + G+ P SY +L + +L D L
Sbjct: 331 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 390
Query: 457 HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
L + +PN + +++ +G KA + + M S + I + + N +L
Sbjct: 391 ELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKS-KGIVPDVVAGNAVLFG 449
Query: 517 YLSSGDFVKAEKIY 530
SG A++++
Sbjct: 450 LAKSGRLGMAKRVF 463
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 364 GIPTPAFVYKMEAY--AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
GI A+ Y Y K G ++LE++R M SV Y ++ K + E
Sbjct: 155 GIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETV 214
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL----EKCRPNRTIYGIY 477
L++E G+KP + SY + LG R A+ E C+P+ + +
Sbjct: 215 LWLLREMEAHGVKPNVYSYTICIRV---LGQAKRFDEAYRILAKMENEGCKPDVITHTVL 271
Query: 478 LESLKNAGNIEKAEEIFNHM-HSDQ 501
++ L +AG I A+++F M SDQ
Sbjct: 272 IQVLCDAGRISDAKDVFWKMKKSDQ 296
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 124/326 (38%), Gaps = 47/326 (14%)
Query: 173 QHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQG 232
+H + D + T L + +K ++F D+ G P+ T+ I+I + G
Sbjct: 275 KHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRC---G 331
Query: 233 CLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLE 292
+ A +++ MI G P NSL R V G ++ L+ +++ + G
Sbjct: 332 QITRAHDVFSEMID-AGCDPNAVTFNSLMRVHVK--AGRTEKVLK----VYNQMKRLGCP 384
Query: 293 IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
Y+ +I H +N+ E + + M + G + AK DV A
Sbjct: 385 ADTISYNFIIESHCRDENL--EEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAH 442
Query: 353 KTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+ + R+ E + T + M +A+ L++ +EM E +V Y +I +
Sbjct: 443 RMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMF 502
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNR 471
C + LM E VE EKC RPN
Sbjct: 503 CDMKHWNNAYKLMMEMVE----------------------------------EKCLRPNL 528
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHM 497
++Y LE L+ AG ++K EE+ + M
Sbjct: 529 SVYETVLELLRKAGQLKKHEELVDKM 554
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 2/161 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ + + G+ K+ E+F +M+ +V Y +I+ LC+ + + E ++ G
Sbjct: 289 VHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGC 348
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI-YGIYLESLKNAGNIEKAEE 492
P ++ +L +++ G +++ +++ P TI Y +ES N+E+A +
Sbjct: 349 DPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAK 408
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
I N M + + N + N I D A ++Y M
Sbjct: 409 ILNLM-VKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARM 448
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 82/418 (19%), Positives = 159/418 (38%), Gaps = 61/418 (14%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E+ +V+E M D + T L D + + K K + D + +G P+ +T+++
Sbjct: 181 ESVGKVFEEM-SGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNV 239
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
LI + +G + EA + M + G QP +N+L L S + +A
Sbjct: 240 LINSMCK---EGSVREALDLRKNMSE-KGVQPDVVTYNTLITGLSSV------LEMDEAM 289
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ ++ ++ D+ + +H +I +++ +Q
Sbjct: 290 ALLEEMMQGETRVRPDLMTFNSVIHGLC------KIGWMRQALQ---------------- 327
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTP--AFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
+R + ++NG AF + ++ + K++E+ EM
Sbjct: 328 ---------------VRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGL 372
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
Y +I CK + E ES + E GM+P YI L + GM +
Sbjct: 373 QPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARD 432
Query: 459 AFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
F+E C+ + Y + +G + AEE M D+ + + + +I ++ +
Sbjct: 433 LFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDM-IDEGLIPDAVTYSIPINMFA 491
Query: 519 SSGDFVKAEKIYDLMCLKKYEIESAWMEKL----------DYVLSLNRKEVKKPVSLN 566
SGD AE++ M + + A + L + +L L R+ K V+L+
Sbjct: 492 KSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALD 549
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 76/171 (44%), Gaps = 5/171 (2%)
Query: 357 RLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
RL N I ++ M A +++ + R MQ+ V Y +I LC A
Sbjct: 87 RLASRPNAI---SYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAA 143
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYG 475
+ + L+ E E+G++P + Y L + Y G + + F E + P+ +Y
Sbjct: 144 DVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYT 203
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
++SL G ++KA + + M +++ + N + N+++++ G +A
Sbjct: 204 ALIDSLCRHGKVKKAARVMD-MMTERGLEPNVVTYNVLINSMCKEGSVREA 253
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 177/444 (39%), Gaps = 58/444 (13%)
Query: 108 PEQWRRAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMR----IRENETG 163
PE+ RRA W +L S+ +L+ LN+ L D + C+ +RE E+
Sbjct: 19 PEESRRA---WWIGKLQSNP--SLLFNLNSNVTRLVLSDPSLATQSCIDFFKFLREFESN 73
Query: 164 FRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIV 223
+ D L+ + R+F++ R + + ++N G
Sbjct: 74 LKP------------DLTAVVTLSHRLYSNRRFSEMRLLLNSVVNDG------------- 108
Query: 224 AYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIF 283
+ PV+G ++ + I ++ + +FR V ++ +F
Sbjct: 109 -FYERPVEGL---GSAMVDCDISEEKFEFWEKFFDLVFRVYVDNG------MFEEGLRVF 158
Query: 284 HNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL---LKKEMQQAGFEEGKEVLLSVLR 340
++ GL I D S +++L + + + RI L + M +G + L V+
Sbjct: 159 DYMVKKGLSI--DERSCIVFLVAAKK---RRRIDLCLEFFRRMVDSGVKITVYSLTIVVE 213
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLG 398
+ G+VE ++K S GI A+ Y + AY K +F +I + M++
Sbjct: 214 GLCRRGEVEKSKKLIKEF--SGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGV 271
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
+ Y +IEL K + E L E E G++ + Y +L + G R L
Sbjct: 272 VYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFL 331
Query: 459 AFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
F E EK P+ YG ++ + G + AE + N M S + + + N +++ Y
Sbjct: 332 LFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQS-KGVNITQVVFNTLINGY 390
Query: 518 LSSGDFVKAEKIYDLMCLKKYEIE 541
G +A IYD+M K ++ +
Sbjct: 391 CRKGMIDEASMIYDVMEKKGFQAD 414
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/382 (19%), Positives = 159/382 (41%), Gaps = 18/382 (4%)
Query: 119 LCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENE-TGFRVYEWMMQQHWYR 177
LC+ K L++ + K ++ E TY + ++ + +G +M++
Sbjct: 215 LCRRGEVEKSKKLIKEFSG--KGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVV 272
Query: 178 FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEA 237
++ T L + K K +FD++ +G + S++ + ++++ +G + A
Sbjct: 273 YNKVTYTLLIELSVKNGKMNDVEKLFDEMRERG-IESDIHVYTSLISWNCR--KGNIKRA 329
Query: 238 CSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI 297
+++ + + G P + +L V K G + AE + + + + G+ I + +
Sbjct: 330 FLLFDELTE-KGLLPSSHTYGALIDG-VCKVGEMG-----AAEILMNEMQSKGVNITQVV 382
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL- 356
++ LI + + ID+ S++ M++ GF+ + + C D K WL
Sbjct: 383 FNTLINGYCRKGMIDEA--SMIYDVMEKKGFQ-ADVFTCNTIASCFNRLKRYDEAKQWLF 439
Query: 357 RLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
R++E + T ++ ++ Y K G ++ +F EM + + Y+ +I CK
Sbjct: 440 RMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQG 499
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYG 475
+ + L GM P +Y +L + D FSE L+ N Y
Sbjct: 500 KVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYT 559
Query: 476 IYLESLKNAGNIEKAEEIFNHM 497
+ + L AG ++A +++ +
Sbjct: 560 VMISGLSKAGKSDEAFGLYDEI 581
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 143/351 (40%), Gaps = 14/351 (3%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L D K + + D+++ QG VP + + ++V L + + EA + R
Sbjct: 332 TCLIDGTCKAGRLDDAIVLLDEMVRQG-VPLNVVTYTVLVDGLCKERK--VAEAEDVL-R 387
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M++ G + L+ +L G ++A + + GLE+ +Y LI
Sbjct: 388 MMEKAGVRANELLYTTLIH------GHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQ 441
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+D+ + SLL K M ++G E + +++ C K G V +A ++L+S
Sbjct: 442 GLCNVHKLDEAK-SLLTK-MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
+ ++ K G +++ F +M++ +V AY +++ LCK
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLK 482
L E V GM Y L + YL G +HD L + + Y ++
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 619
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
N + +A E+F+ M I + N ++S Y G+ +A + D M
Sbjct: 620 NLNMMPEAREVFSEMIG-HGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 105/494 (21%), Positives = 198/494 (40%), Gaps = 64/494 (12%)
Query: 93 HLGEPVVEVIELEELPEQWRRAKLAWLCKELPS--HKGGTL---VRILNAQKKWLRQEDG 147
HL +V+++ L RR+ LA + L S G L VR + A+ + LR
Sbjct: 98 HLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAV-ARVRELRVPPN 156
Query: 148 TYLAVHCM-RIRENETGF---RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIF 203
T H + R+ + +G R++E + + + F+ + D++ KE + A+ R +F
Sbjct: 157 TRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVI-----DFLCKEGELAEARSLF 211
Query: 204 DDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRA 263
+ G +P +TF+ LI Y G LDE + M + G + +N+L
Sbjct: 212 SRMKEMGCLPDVVTFNSLIDGYGKC---GELDEVEQLVEEM-RRSGCKADVVTYNALINC 267
Query: 264 LVSKPGGLSKYY------------------------------LQQAEFIFHNLLTSGLEI 293
K G + Y +++A +F + G+ +
Sbjct: 268 F-CKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMAL 326
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
+ Y+ LI +D + L EM + G ++ KE V +AE
Sbjct: 327 NEFTYTCLIDGTCKAGRLDDAIV--LLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAED 384
Query: 354 TWLRLLESDNGIPTPAFVYKMEAYAKIGEFM-----KSLEIFREMQERLGSASVPAYHKI 408
LR++E G+ +Y + G FM K+L + EM+ + + Y +
Sbjct: 385 V-LRMMEK-AGVRANELLYTTLIH---GHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC- 467
I+ LC + + +SL+ + E+G++P Y + + G + L+
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
+PN Y ++ L AG+I++A FN M D + N ++ ++ +G +A
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMR-DLGLDPNVQAYTALVDGLCKNGCLNEAV 558
Query: 528 KIYDLMCLKKYEIE 541
++++ M K ++
Sbjct: 559 QLFNEMVHKGMSLD 572
>gi|334185941|ref|NP_190885.5| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|332645523|gb|AEE79044.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 499
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 125/298 (41%), Gaps = 16/298 (5%)
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRAL--VSKPGGLSKYYLQQAEFIFHNLLTSGLEIQ 294
A I+N + + Y+PR + LF+ L +P QA +F +L+ GL+
Sbjct: 127 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQP--------DQASLLFEVMLSEGLKPT 178
Query: 295 KDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKT 354
D+Y+ LI ++ + +DK S L+ + + ++ C K G + +
Sbjct: 179 IDVYTSLISVYGKSELLDKA-FSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSI 237
Query: 355 WLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS-ASVPAYHKIIELLC 413
L + G T + ++ Y K G F + + +M E S V + II
Sbjct: 238 VLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYG 297
Query: 414 KAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNR 471
ES F G++P + ++ L + GM+ ++ + + +EK
Sbjct: 298 NGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKM-CSVMDFMEKRFFSLTT 356
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
Y I +E+ AG IEK +++F M Q + N+ + +++AY +G VK + +
Sbjct: 357 VTYNIVIETFGKAGRIEKMDDVFRKMKY-QGVKPNSITYCSLVNAYSKAGLVVKIDSV 413
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 163/371 (43%), Gaps = 55/371 (14%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D ++ +G P +T+ +++ +G D A ++ N+M Q G +P ++N++
Sbjct: 822 LIDRMVAKGCQPDLVTYGVVVNGLCK---RGDTDLAFNLLNKMEQ-GKLEPGVLIYNTII 877
Query: 262 RALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLI-WLHSYQDNIDKERISLL 319
GL KY ++ A +F + T G+ YS LI L +Y D R L
Sbjct: 878 -------DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR---L 927
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES--DNGIPTPAFVY----- 372
+M + +++ KEG + +AEK + +++ D I T + +
Sbjct: 928 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 987
Query: 373 --KMEAYAKIGEFMKS--------------------------LEIFREMQERLGSASVPA 404
+++ ++ EFM S +E+FREM +R +
Sbjct: 988 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 1047
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
Y+ +I+ L +A + ++ + + KE V G+ P + +Y L + G ++ + F E L
Sbjct: 1048 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF-EYL 1106
Query: 465 EKCRPNRTI--YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
++ + TI Y I +E + AG +E ++F ++ S + + + + N ++S + G
Sbjct: 1107 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGS 1165
Query: 523 FVKAEKIYDLM 533
+A+ ++ M
Sbjct: 1166 KEEADALFKEM 1176
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 124/316 (39%), Gaps = 47/316 (14%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D+I + P TF LI A++ +G L EA +Y+ M++ P ++SL
Sbjct: 927 LLSDMIERKINPDVFTFSALIDAFVK---EGKLVEAEKLYDEMVKRS-IDPSIVTYSSLI 982
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
F H+ L K ++ ++ H + D + +L+K
Sbjct: 983 NG-----------------FCMHDRLDEA----KQMFEFMVSKHCFPDVVTYN--TLIKG 1019
Query: 322 EMQQAGFEEGKEVLLS---------------VLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
+ EEG EV +++ + GD + A++ + ++ +G+P
Sbjct: 1020 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS--DGVP 1077
Query: 367 TPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
Y ++ K G+ K++ +F +Q ++ Y+ +IE +CKA + E L
Sbjct: 1078 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 1137
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKN 483
G+KP + +Y + + + G + F E E PN Y + +
Sbjct: 1138 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLR 1197
Query: 484 AGNIEKAEEIFNHMHS 499
G+ E + E+ M S
Sbjct: 1198 DGDREASAELIKEMRS 1213
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 117/301 (38%), Gaps = 43/301 (14%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP- 229
+++ R + T L + + +++ + D+I + P+ +T+ L+ A++
Sbjct: 319 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 378
Query: 230 -----------VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQ 278
V+ +D Y+ +I R N +F +VSK G L
Sbjct: 379 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK-GCL------- 430
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
A+ + +N L +G K + G+ L +EM Q G ++
Sbjct: 431 ADVVSYNTLINGFCKAKRVEDGM----------------KLFREMSQRGLVSNTVTYNTL 474
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQER 396
++ + GDV+ A++ + ++ GI + Y + GE K+L IF +MQ+R
Sbjct: 475 IQGFFQAGDVDKAQEFFSQM--DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 532
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
+ Y +I +CK + E SL F +K L P + T M L L
Sbjct: 533 EMDLDIVTYTTVIRGMCKTGKVEEAWSL---FCSLSLKGLKPDIVTYTTMMSGLCTKGLL 589
Query: 457 H 457
H
Sbjct: 590 H 590
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 4/162 (2%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
++A+ K G+ +++ E+F EM + Y +I LC + + + V G
Sbjct: 370 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 429
Query: 434 KPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTI-YGIYLESLKNAGNIEKAE 491
+ SY L N + + D + L F E ++ + T+ Y ++ AG+++KA+
Sbjct: 430 LADVVSYNTLINGFCKAKRVEDGMKL-FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 488
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
E F+ M I + + NI+L +G+ KA I++ M
Sbjct: 489 EFFSQMDF-FGISPDIWTYNILLGGLCDNGELEKALVIFEDM 529
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM-HDRLHLAF 460
+ AY+ II+ LCK + KE G++P + +Y L N N D L
Sbjct: 293 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 352
Query: 461 SECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+K PN Y L++ G + +A+E+F M
Sbjct: 353 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 389
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 117/291 (40%), Gaps = 48/291 (16%)
Query: 155 MRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
+R+ + + GFR+ + M + D + L + + KE K ++FD+++++G VP+
Sbjct: 186 IRLGDLDEGFRL-KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPN 244
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY 274
+TF LI + G +D A +Y +M L SL
Sbjct: 245 GVTFTTLIDGHCK---NGRVDLAMEVYKQM-----------LSQSL-------------- 276
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
+ I +N L GL + D L QD ID EM+ G + K
Sbjct: 277 ---SPDLITYNTLIYGLCKKGD-------LKQAQDLID---------EMRMKGLKPDKIS 317
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
+++ C KEGD+E A + R+++ + + A+ + + G + + ++ REM
Sbjct: 318 YTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREML 377
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
Y II CK + L+KE G P + +Y L N
Sbjct: 378 SVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMN 428
Score = 45.8 bits (107), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 18/220 (8%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD---NGIPTPAFVYKME 375
LK M +G + ++ KE ++DA + + +L+ NG+ F ++
Sbjct: 197 LKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV---TFTTLID 253
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ K G ++E++++M + S + Y+ +I LCK + + + L+ E G+KP
Sbjct: 254 GHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKP 313
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSE----CLEKCRPNRTIYGIYLESLKNAGNIEKAE 491
SY L + G L AF E R + Y + L G AE
Sbjct: 314 DKISYTTLIDGCCKEG---DLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAE 370
Query: 492 EIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKI 529
++ M S +G+ +T + +I++ + GD K+
Sbjct: 371 KMLREMLS---VGLRPDTGTYTMIINEFCKKGDVWTGSKL 407
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 117/281 (41%), Gaps = 26/281 (9%)
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP 403
+ G + DA + + E +P +E K+ F ++E+ E AS+
Sbjct: 82 ESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYKEILECGYPASLY 141
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSE 462
++ ++ CK + + S+ + G++P + S+ L N Y+ LG + + L +
Sbjct: 142 FFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAM 201
Query: 463 CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
+P+ Y + + L ++ A E+F+ M D+ + N + ++ + +G
Sbjct: 202 HASGVQPDVYTYSVLINGLCKESKMDDANELFDEM-LDKGLVPNGVTFTTLIDGHCKNGR 260
Query: 523 FVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIGL---- 578
A ++Y M + + L Y L + ++K+ + +L E R + GL
Sbjct: 261 VDLAMEVYKQMLSQSLSPDLITYNTLIYGLC-KKGDLKQ--AQDLIDEMR--MKGLKPDK 315
Query: 579 -----LLGGLCIESD-----EKRKRHMIRFQFNENSRMHSV 609
L+ G C E D E RKR MI+ EN R+ V
Sbjct: 316 ISYTTLIDGCCKEGDLETAFEHRKR-MIQ----ENIRLDDV 351
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 91/228 (39%), Gaps = 2/228 (0%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
EM G E ++ K G ++DA + ++++ + ++ K G
Sbjct: 834 EMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 893
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ + E+ EM + ++ Y+ I+ LCK+ E L+ EF G+ +Y
Sbjct: 894 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 953
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
L + Y G D+ +E L K +P + + + G +E E++ N M +
Sbjct: 954 TLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA- 1012
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL 548
+ I N + N ++ Y + A IY MC + E + E L
Sbjct: 1013 KGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENL 1060
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 144/359 (40%), Gaps = 20/359 (5%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D + T L D K F ++ ++ P +T+ +I + G + EA
Sbjct: 773 DTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI---GDMVEAG 829
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
+++ M+ G +P L G +++ A + ++++ +G Y
Sbjct: 830 KLFHEML-CRGLEPDIITFTELMN------GYCKAGHIKDAFRVHNHMIQAGCSPNVVTY 882
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+ LI + ++D + L EM + G + S++ K G++E+A K
Sbjct: 883 TTLIDGLCKEGDLDSA--NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 940
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
+ T + M+AY K GE K+ EI EM + ++ ++ ++ C
Sbjct: 941 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGML 1000
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS----ECLEKCRPNRTIY 474
E E L+ + G+ P ++ L Y + + L A + C P+ Y
Sbjct: 1001 EDGEKLLNWMLAKGIAPNATTFNCLVKQYC---IRNNLKAATAIYKDMCSRGVEPDGKTY 1057
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++ NA N+++A +F M + V+ + ++++ + FV+A +I+D M
Sbjct: 1058 ENLVKGHCNARNMKEAWFLFQEMKG-KGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQM 1115
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 104/239 (43%), Gaps = 10/239 (4%)
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
D+ S ++ Y + +++ L ++M+Q G + S++ + + + +AE+ +
Sbjct: 703 DVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAF 762
Query: 356 LRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
++ GI VY ++ + K G+ + + F EM R + V Y II C
Sbjct: 763 SEMI--GQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 820
Query: 414 KAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRT 472
+ + L E + G++P + ++ L N Y G + D + C PN
Sbjct: 821 QIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVV 880
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKI 529
Y ++ L G+++ A E+ + M IG+ N + N I++ SG+ +A K+
Sbjct: 881 TYTTLIDGLCKEGDLDSANELLHEMWK---IGLQPNIFTYNSIVNGLCKSGNIEEAVKL 936
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 96/216 (44%), Gaps = 6/216 (2%)
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
++G ++ + M+ + + V +Y +I C+ E + L+++ + G+KP
Sbjct: 680 CQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNS 739
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+Y ++ + + AFSE + + P+ +Y ++ G+I A + F
Sbjct: 740 YTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYE 799
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL--DYVLSL 554
MHS + I + + I+S + GD V+A K++ M + E + +L Y +
Sbjct: 800 MHS-RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAG 858
Query: 555 NRKEVKKPVSLNLSSEQRENLI--GLLLGGLCIESD 588
+ K+ + + + + N++ L+ GLC E D
Sbjct: 859 HIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 894
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 2/146 (1%)
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
++ +FRE E +V +Y+ +I +C+ L+ G P + SY + N
Sbjct: 653 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVIN 712
Query: 446 MYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
Y G D++ + +K +PN YG + L + +AEE F+ M Q I
Sbjct: 713 GYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIG-QGIL 771
Query: 505 VNTRSCNIILSAYLSSGDFVKAEKIY 530
+T ++ + GD A K +
Sbjct: 772 PDTIVYTTLVDGFCKRGDIRAASKFF 797
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 134/302 (44%), Gaps = 25/302 (8%)
Query: 144 QEDG------TYLAVHCMRIRENET--GFRVYEWMMQQHWYRFDFALATKLADYMGKERK 195
QEDG TY V ++ T F+V++ M ++ + L + +E K
Sbjct: 260 QEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM-RERGVSCNIVTYNTLIGGLCREMK 318
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS 255
+ + D + + G P+ +T++ LI + G L +A S+ R ++ G P
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGV---GKLGKALSLC-RDLKSRGLSPSLV 374
Query: 256 LHNSLFRALVSK--PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
+N L K G +K + E G++ K Y+ LI + DN+
Sbjct: 375 TYNILVSGFCRKGDTSGAAKMVKEMEE--------RGIKPSKVTYTILIDTFARSDNM-- 424
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
E+ L+ M++ G ++ +G + +A + + ++E + +
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ Y K G ++L++ +EM+E+ + +V +Y +IE+LCK +++ E L+++ +++G+
Sbjct: 485 ILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Query: 434 KP 435
P
Sbjct: 545 DP 546
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 141/348 (40%), Gaps = 56/348 (16%)
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
+ ++I +Y+ + L+ + S +N M+ G+ P + N L +V S + Q
Sbjct: 97 YEVIINSYVQSQ---SLNLSISYFNEMVD-NGFVPGSNCFNYLLTFVVG-----SSSFNQ 147
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
F N ++ D+YS I + + + E+ L E+ + GF + +
Sbjct: 148 WWSFFNEN----KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTT 203
Query: 338 VLRVCAKEGDVEDA---------------EKTWLRLLES--DNGIPTPAF-VYK------ 373
++ C K+G++E A E+T+ L+ NG+ F +Y+
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG 263
Query: 374 -----------MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
M K G + ++F EM+ER S ++ Y+ +I LC+ +
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEAN 323
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCR---PNRTIYGIYL 478
++ + G+ P + +Y L + + +G +L A S C + K R P+ Y I +
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGFCGVG---KLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
G+ A ++ M ++ I + + I++ + S + KA
Sbjct: 381 SGFCRKGDTSGAAKMVKEME-ERGIKPSKVTYTILIDTFARSDNMEKA 427
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 139/356 (39%), Gaps = 57/356 (16%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
+ + T L D K+ + K +D+F ++ G V +E T+ +LI
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLI---------------- 240
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
N LF+ V K G Y Q + +F NL T + +
Sbjct: 241 -------------------NGLFKNGVKKQG-FEMYEKMQEDGVFPNLYTYNCVMNQLC- 279
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+D K+ + EM++ G +++ +E + +A K +
Sbjct: 280 ---------KDGRTKDAFQVFD-EMRERGVSCNIVTYNTLIGGLCREMKLNEANKV-VDQ 328
Query: 359 LESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
++SD GI Y ++ + +G+ K+L + R+++ R S S+ Y+ ++ C+
Sbjct: 329 MKSD-GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYL---NLGMHDRLHLAFSECLEKCRPNRTI 473
+T ++KE E G+KP +Y L + + N+ +L L+ E P+
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEEL--GLVPDVHT 445
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
Y + + G + +A +F M ++ N N ++ Y G +A K+
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSM-VEKNCEPNEVIYNTMILGYCKEGSSYRALKL 500
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 153/355 (43%), Gaps = 18/355 (5%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + +++ F + + G P + F+ +I A + G LD+A I+ +
Sbjct: 358 TTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINA---SSESGNLDQAMKIFEK 414
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M + G +P S N+L + G + K L+++ + +L + +Q + + I
Sbjct: 415 MKE-SGCKPTASTFNTLIKGY----GKIGK--LEESSRLLDMMLRDEM-LQPNDRTCNIL 466
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL-RLLESD 362
+ ++ + E + +MQ G + ++ + A+ G AE + R+L +
Sbjct: 467 VQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK 526
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+ Y + G+ ++L F M+E ++ ++ +I+ + +
Sbjct: 527 VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVG 586
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESL 481
++ E G+KP + ++ L N + ++G R +++ LE P+ + I +
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGY 646
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
AG EKA++I N M + GV N I+S + S+G+ KA ++Y MC
Sbjct: 647 ARAGEPEKAKQILNQM---RKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMC 698
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 86/207 (41%), Gaps = 8/207 (3%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK---ME 375
KK+ + A FEE KE L+ + K+ + + + G + M
Sbjct: 268 FKKDYKPAVFEEKKEANLADVEAVFKDSEEGRVQLRSFPCVICSGGTTCGDVRSRTKLMN 327
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ G ++ IF + E S+ Y ++ L + + SL+ + + G+KP
Sbjct: 328 GLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKP 387
Query: 436 ---LMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
L + IN ++ NL ++ E C+P + + ++ G +E++
Sbjct: 388 DTILFNAIINASSESGNLDQAMKIFEKMKE--SGCKPTASTFNTLIKGYGKIGKLEESSR 445
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLS 519
+ + M D+ + N R+CNI++ A+ +
Sbjct: 446 LLDMMLRDEMLQPNDRTCNILVQAWCN 472
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 121/294 (41%), Gaps = 22/294 (7%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+I + E R+ + M++ + + L +RK + +I + + G P
Sbjct: 436 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+TF+ L AY + C+ + +I PR LHN + + V G + Y
Sbjct: 496 VTFNTLAKAYAR------IGSTCTAEDMII------PR-MLHNKV-KPNVRTCGTIVNGY 541
Query: 276 LQQAEF-----IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE 330
++ + F+ + G+ +++ LI + + D + + + M++ G +
Sbjct: 542 CEEGKMEEALRFFYRMKELGVHPNLFVFNSLI--KGFLNINDMDGVGEVVDLMEEFGVKP 599
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIF 390
+++ + GD++ E+ + +LE AF + YA+ GE K+ +I
Sbjct: 600 DVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQIL 659
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE-TGMKPLMPSYINL 443
+M++ +V Y +II C A E + + K+ G+ P + +Y L
Sbjct: 660 NQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETL 713
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 16/279 (5%)
Query: 134 ILNAQKKW-LRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
+ +A KW LR +Y L +R+ + + GFR+ M+ + D + L + +
Sbjct: 164 VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG-VQPDXYTYSVLINGL 222
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
KE K ++FD+++ +G VP+ +TF LI + +G +D A IY RM+
Sbjct: 223 CKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK---KGRVDLAMEIYKRMLS-QSL 278
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
P +N+L L K L+QA + ++ GL+ K Y+ LI + +
Sbjct: 279 LPDLITYNTLIYGLCKKGD------LKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGD 332
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
+D +K M Q +++ +EG DAEK +L T +
Sbjct: 333 LDTAFEH--RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTY 390
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
+ + K G+ K + +EMQ SV Y+ ++
Sbjct: 391 TMIINEFCKKGDVWKGSRLLKEMQRNGHVPSVVTYNVLM 429
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 90/220 (40%), Gaps = 18/220 (8%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD---NGIPTPAFVYKME 375
LK M +G + ++ KE ++DA + + +L NG+ F ++
Sbjct: 199 LKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV---TFTTLID 255
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ K G ++EI++ M + + Y+ +I LCK + + L+ E V G+KP
Sbjct: 256 GHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKP 315
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSE----CLEKCRPNRTIYGIYLESLKNAGNIEKAE 491
+Y L + G L AF E R + Y + L G AE
Sbjct: 316 DKITYTTLIDGCCKEG---DLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372
Query: 492 EIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKI 529
++ M S +G+ +T + +I++ + GD K ++
Sbjct: 373 KMLREMLS---VGLKPDTGTYTMIINEFCKKGDVWKGSRL 409
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+E K+ F + E+ E AS+ ++ ++ CK + + +S+ + G+
Sbjct: 114 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 173
Query: 434 KPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
+P + SY L N Y+ LG + + L + +P+ Y + + L ++ A E
Sbjct: 174 RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANE 233
Query: 493 IFNHM 497
+F+ M
Sbjct: 234 LFDEM 238
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 150/366 (40%), Gaps = 16/366 (4%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D L DY+ K + + R +FD + +G P T+ L+ Y + +G L E
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT---KGALVEMH 359
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
+ + M++ G P ++ +F L+ K + QA +F + GL Y
Sbjct: 360 GLLDLMVR-NGIHP----NHYVFSILICAYAKQGK--VDQAMLVFSKMRQQGLNPDTVTY 412
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+I + ++ ++M G V S++ + A++ L +
Sbjct: 413 GTVIGILCKSGRVEDAMRYF--EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELLCKAEE 417
L+ + T F ++++ K G ++S ++F ++ R+G ++ Y +I+ C A +
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPNIITYSTLIDGYCLAGK 529
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGI 476
+ L+ V GMKP +Y L N Y + M D L L P+ Y I
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
L+ L A+E++ + T + + NIIL + +A +++ +CL
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGT-QLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 648
Query: 537 KYEIES 542
++E+
Sbjct: 649 DLQLET 654
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 144/344 (41%), Gaps = 27/344 (7%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
R +FD+++ +GR S + L+ + A S YNRM + G + P+L
Sbjct: 39 RHVFDELLRRGRGASIYGLN----CALADVARHSPAAAVSRYNRMARAGADEVTPNL--C 92
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
+ L+ + L A N++ G + ++ L+ D + + ++
Sbjct: 93 TYGILIGSCCCAGRLDLGFAAL--GNVIKKGFRVDAIAFTPLLK-GLCADKRTSDAMDIV 149
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEA 376
+ M Q G +L+ E ++A + L+++ D G P ++ +
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE-LLQMMPDDGGDCPPDVVSYTTVING 208
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
+ K G+ K+ + EM +R +V Y+ II LCKA+ + ++ V+ G+ P
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 437 MPSYINLTNMYLN-------LGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEK 489
+Y ++ + Y + +G ++H S+ +E P+ Y ++ L G +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMH---SDGVE---PDVVTYNSLMDYLCKNGRCTE 322
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A ++F+ M + + + + +L Y + G V+ + DLM
Sbjct: 323 ARKMFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365
>gi|297797974|ref|XP_002866871.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
gi|297312707|gb|EFH43130.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
Length = 561
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/366 (19%), Positives = 140/366 (38%), Gaps = 79/366 (21%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
V+ WM +Q WY D + +KL MGK+ + +F ++ N G P ++ LI A+
Sbjct: 119 VFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAH 178
Query: 226 LSAPVQG-CLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
L + L++ +++M + QP +N L RA ++ G + Q +F
Sbjct: 179 LHTRDKAKALEKVRGYFDKMKGMERCQPNVVTYNILLRAF-AQSGK-----VDQVNALFK 232
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
+L S + D+Y+ V+ K
Sbjct: 233 DLDMS--PVSPDVYT-----------------------------------FNGVMDAYGK 255
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
G +++ E R+ ++ F +++Y K EF K + F+ + ++P
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
++ +I KA + E + K+ + MPS+I M +
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMN---YMPSFITYECMIM---------------- 356
Query: 465 EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFV 524
+YG G++ +A EIF + + + + + N +L Y +G ++
Sbjct: 357 --------MYGY-------CGSVSRAREIFEEVVDSERV-LKASTLNAMLEVYCRNGLYM 400
Query: 525 KAEKIY 530
+A+K++
Sbjct: 401 EADKLF 406
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 102/232 (43%), Gaps = 27/232 (11%)
Query: 316 ISLLKKEMQQAGFEEGKEVLLSVL--RVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
IS +K ++ E VL+ L R+ KE V+ +K +++++ D+ F+
Sbjct: 51 ISSRRKLAERESAERENRVLVRSLMSRISDKEPLVKTLDK-YVKVVRCDH-----CFLL- 103
Query: 374 MEAYAKIGEFMKSLEIFREMQ-ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
E K ++++ LE+FR MQ +R Y K+I ++ K +T + L E +G
Sbjct: 104 FEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSG 163
Query: 433 MKPLMPSYINLTNMYLNL-----------GMHDRLHLAFSECLEKCRPNRTIYGIYLESL 481
+P Y L +L+ G D++ + +E+C+PN Y I L +
Sbjct: 164 CRPDASVYNALITAHLHTRDKAKALEKVRGYFDKM-----KGMERCQPNVVTYNILLRAF 218
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+G +++ +F + + + + N ++ AY +G + E + M
Sbjct: 219 AQSGKVDQVNALFKDLDM-SPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 2/197 (1%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
++RV G V DA +L + +EA K F +++ + EM+ +
Sbjct: 148 LIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKG 207
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
+ ++ Y+ II +C+ + L+ G +P SY L D +
Sbjct: 208 CTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVE 267
Query: 458 LAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F+E +EK C PN + + + G +E+A ++ M ++ NT CNI++++
Sbjct: 268 ELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQM-TEHECATNTTLCNIVINS 326
Query: 517 YLSSGDFVKAEKIYDLM 533
G A K + M
Sbjct: 327 ICKQGRVDDAFKFLNNM 343
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 147/363 (40%), Gaps = 69/363 (19%)
Query: 138 QKKWLRQEDGTYLAV--HCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERK 195
Q+ LR + T ++ C+ ++ E G ++ ++ +Q F + L D K
Sbjct: 226 QQSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQ--LGFTIKIGNALVDMYCKCGH 283
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS 255
+ R+IF+D+ + + + + ++ Y++ G LDEA ++ R P
Sbjct: 284 LSIAREIFNDM----PIKTVICWTSMVSGYVNC---GQLDEARELFER---------SPV 327
Query: 256 LHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER 315
L+ A+++ G + + + D +
Sbjct: 328 RDVVLWTAMIN---------------------------------GYVQFNRFDDAVA--- 351
Query: 316 ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK-- 373
L +EMQ + L+++L CA+ G +E + W+ +N I A V
Sbjct: 352 ---LFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGK--WIHGYIDENKIMIDAVVGTAL 406
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+E YAK G KSLEIF ++E+ ++ II L +T L E V+TG+
Sbjct: 407 IEMYAKCGFIEKSLEIFNGLKEK----DTASWTSIICGLAMNGKTSKALELFAEMVQTGV 462
Query: 434 KPLMPSYINLTNMYLNLGM--HDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAE 491
KP ++I + + + G+ R H + + P YG ++ L AG +++AE
Sbjct: 463 KPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAE 522
Query: 492 EIF 494
E+
Sbjct: 523 ELI 525
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 186/474 (39%), Gaps = 43/474 (9%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F+ +I+ P +F+ L+ A A ++ D S+Y RM L G P N L
Sbjct: 79 VFNHLIDMQPTPPISSFNTLLGAV--AKIKRYFD-VISLYKRM-SLIGLAPDFITLNILI 134
Query: 262 RALVSKPGGLSKYYLQQAEF---IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
+ L + +F + +L G ++ L+ I E L
Sbjct: 135 NCYCN---------LNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRI-SEATGL 184
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP------AFVY 372
L+K M + G+ ++L G+ A K +L + G +
Sbjct: 185 LRK-MVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCT 243
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
+++ K G K E+F EM+ R S V AY II +C E + L E V+ G
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303
Query: 433 MKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAE 491
+ P + ++ L + G M + HL P+ Y ++ G I+ A
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDAR 363
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY-DLMCLKKYEIESAWMEKLDY 550
++F M S + I + S N++++ Y SG V+A+K+Y ++MC EI +
Sbjct: 364 DLFVSMES-KGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMC---KEIMPTVITYNTL 419
Query: 551 VLSLNRKEVKKPVSLNLSSEQRENLI-------GLLLGGLCIESDEKRKRHMIRFQFNEN 603
+ L R E K + NL E + + + +LL GLC + M F + EN
Sbjct: 420 LTGLFR-EGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLC--KNNHLSEAMELFHYLEN 476
Query: 604 SRMHSVLRRYLYDQYHEWLHPSFKFWPKGRLVIPKLIHRWLTPRALAYWFMYGG 657
++ +++ + L + K R + +L H L P + Y M G
Sbjct: 477 HDFQPSIQ--IFNCLIDGLCKARKIE-IARELFNRLSHEGLEPNVITYTVMIHG 527
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 124/299 (41%), Gaps = 13/299 (4%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
+ +F++++++G P+ +TF++LI A A G ++EA + MIQ G P +N+
Sbjct: 293 KGLFNEMVDEGVHPNVVTFNVLIDALCKA---GKMEEANHLLKLMIQR-GESPDTFTYNT 348
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
L G + + A +F ++ + G+E Y+ LI + Y + L
Sbjct: 349 LID------GFCLEGRIDDARDLFVSMESKGIETDAVSYNVLI--NGYCKSGRMVEAKKL 400
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAK 379
+EM ++L +EG V DA + + D + + ++ K
Sbjct: 401 YREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCK 460
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
+++E+F ++ S+ ++ +I+ LCKA + E+ L G++P + +
Sbjct: 461 NNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVIT 520
Query: 440 YINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
Y + + G + F EK C PN + + ++K E+ M
Sbjct: 521 YTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEM 579
>gi|159464329|ref|XP_001690394.1| hypothetical protein CHLREDRAFT_114572 [Chlamydomonas reinhardtii]
gi|158279894|gb|EDP05653.1| predicted protein [Chlamydomonas reinhardtii]
Length = 287
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 41/260 (15%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
L A+ ++ +L G Y+ LI + + + + R L + ++G +
Sbjct: 51 LDLAQDVYKQMLEEGCSPNLVTYNILIDVEASKRKTTERR--RLAVALVRSGIQAEVRTY 108
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM 393
+V+ C K G E A K + ++L + G+ A Y + AY K G+ K+L+IFR+M
Sbjct: 109 NTVISACNKSGQPEQALKVYEKMLAA--GVKPSATTYTALISAYGKKGQVEKALDIFRDM 166
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
R +V Y +I KA E+ L + MH
Sbjct: 167 IRRGCERNVITYSSLISACEKAGRWEMALELFSK------------------------MH 202
Query: 454 DRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
E C+PN Y + + + G+ EKA E+F M + + C +I
Sbjct: 203 K----------ENCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLI 252
Query: 514 LSAYLSSGDFVKAEKIYDLM 533
+AY G + +A K ++ M
Sbjct: 253 -TAYERGGQWRRALKAFEQM 271
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 69/153 (45%), Gaps = 2/153 (1%)
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ ++LE+ EM+ R +V Y ++ + KA E +L + + K+ +E G P + +Y
Sbjct: 15 QLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYN 74
Query: 442 NLTNMYLN-LGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
L ++ + +R LA + + Y + + +G E+A +++ M +
Sbjct: 75 ILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQPEQALKVYEKMLA- 133
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ + + ++SAY G KA I+ M
Sbjct: 134 AGVKPSATTYTALISAYGKKGQVEKALDIFRDM 166
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 147/357 (41%), Gaps = 30/357 (8%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + E K R + ++++ G P+ +TF+ LI ++S +G EA +++ M+
Sbjct: 304 LLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHIS---EGNFKEALKMFH-MM 359
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF-----IFHNLLTSGLEIQKDIYSG 300
+ G + L L + AEF + + +G+ + + Y+G
Sbjct: 360 EAKGLIGTEVSYGVLLDGLC-----------KNAEFDLARGFYMRMKRNGVCVGRITYTG 408
Query: 301 LIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
+I +D+ + L EM + G + +++ + G ++ A++ R+
Sbjct: 409 MIDGLCKNGFLDEAVVML--NEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYR 466
Query: 361 ---SDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
S NGI +Y ++G +++ I+ M + ++ ++ LCKA +
Sbjct: 467 VGLSPNGIIYSTLIYNC---CRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGK 523
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-PNRTIYGI 476
E M+ G+ P S+ L N Y + G + F E + P YG
Sbjct: 524 VAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
L+ L G++ AE+ + + V+T CN +++A SG+ KA ++ M
Sbjct: 584 LLKGLCKGGHLIAAEKFLKSLQ-NVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEM 639
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 87/206 (42%), Gaps = 19/206 (9%)
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
+L++VL CA EG + + ++ +S + + Y K G F ++E+
Sbjct: 197 NILINVL--CA-EGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 253
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG- 451
M + +A V Y+ +I LC++ + L+++ + + P +Y L N + N G
Sbjct: 254 MNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGK 313
Query: 452 -------MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
+++ L S PN + ++ + GN ++A ++F+ M + IG
Sbjct: 314 VLIARQLLNEMLTFGLS-------PNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIG 366
Query: 505 VNTRSCNIILSAYLSSGDFVKAEKIY 530
S ++L + +F A Y
Sbjct: 367 TEV-SYGVLLDGLCKNAEFDLARGFY 391
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 99/240 (41%), Gaps = 53/240 (22%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE------IFR 391
++RV +EG ++D+ + + RL+ P+ VY A +G +KS E +
Sbjct: 129 LIRVYLREGMIQDSLEIF-RLMGLYGFNPS---VYTCNAI--LGSIVKSCEDVSVWSFLK 182
Query: 392 EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
EM +R V ++ +I +LC + + LM++ ++G P + +Y + + Y G
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242
Query: 452 -------MHDRLHLAFSE---CL------EKCR--------------------PNRTIYG 475
+ D ++L C + CR PN Y
Sbjct: 243 RFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYN 302
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIYDLM 533
L N G + A ++ N M T G+ N + N ++ ++S G+F +A K++ +M
Sbjct: 303 TLLNGFSNEGKVLIARQLLNEM---LTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMM 359
>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
Length = 1090
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 119/291 (40%), Gaps = 39/291 (13%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG--- 248
K +F+K ++ ++ +G P +T+ +LI L G +D A +M+ G
Sbjct: 727 KRGQFSKSLYLYKYMVRKGIRPDNVTYRLLI---LGLSECGLIDIAVKFLEKMVLEGIFP 783
Query: 249 ----------GYQPRPSLHNSL-----------------FRALVSKPGGLSKYYLQQAEF 281
+ + +HN+L F A+++ G + K YL Q+
Sbjct: 784 DKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMIN--GLIRKNYLDQSHE 841
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
+ H +L GL+ Y L+ ID R LK+EM+ G + S++R
Sbjct: 842 VLHEMLQVGLQPNHTHYIALVNAKCRVGEID--RAFRLKEEMKAIGIVPAEVAESSIIRG 899
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
+ G +E+A + ++ S +PT A F M + K + +L + R M+
Sbjct: 900 LCRCGKLEEAVIVFSNMMRS-GMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKV 958
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
V +Y+ +I LCK + L E G+ P + +YI LT + G
Sbjct: 959 DVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTG 1009
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/358 (19%), Positives = 143/358 (39%), Gaps = 17/358 (4%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP-VQGCLDEA 237
D + L + M + K + ++I + G +P+++ + LI Y A V+ L
Sbjct: 398 DVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHF 457
Query: 238 CSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI 297
IY R G P +HN+L RA + + +AE + +
Sbjct: 458 VDIYRR-----GLVANPVIHNALLRAFYREG------MITEAEHFRQYMSRMNISFNSVS 506
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
++ +I + ++ I E S+ +M + G ++LR + G + A++
Sbjct: 507 FNCIIDSYCHRGKI-VEAFSVYD-DMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFC 564
Query: 358 LLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
LL+ + + F + K G ++L+I +M + + Y ++ C+ +
Sbjct: 565 LLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGK 624
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE--CLEKCRPNRTIYG 475
+++ +E G+ P +Y L N +N G F E C E + Y
Sbjct: 625 ILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYN 684
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ GN+ + + + M+ ++ + N+ S NI++ Y+ G F K+ +Y M
Sbjct: 685 SLMNGYLKGGNVNTIKRMMSDMYQNE-VYPNSASYNILMHGYVKRGQFSKSLYLYKYM 741
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 106/262 (40%), Gaps = 10/262 (3%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+ A +F+++L L Y+ +I + IDK +S+L EM+ G +
Sbjct: 275 INHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKA-LSVLS-EMEITGVMPSELTY 332
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
++L K + A + L I ++ + ++GE K+ +I + M E
Sbjct: 333 SALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLE 392
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
V Y +I +C+ + T+ ++ ++G+ P Y L Y G
Sbjct: 393 DGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGY--- 449
Query: 456 LHLAFSECLEKCR----PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
+ +A ++ R N I+ L + G I +AE +M S I N+ S N
Sbjct: 450 VKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYM-SRMNISFNSVSFN 508
Query: 512 IILSAYLSSGDFVKAEKIYDLM 533
I+ +Y G V+A +YD M
Sbjct: 509 CIIDSYCHRGKIVEAFSVYDDM 530
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 125/278 (44%), Gaps = 20/278 (7%)
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
+P ++NSL A S+ G + A I ++L + + + Y+ +I N
Sbjct: 43 KPDADIYNSLIHAH-SRAG-----QWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGN 96
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCA-KEGDVEDAEKTWLRLLESDNGIPTPA 369
K+ + L KK M + G G +++ + + A K G ++ +++ N + +
Sbjct: 97 W-KKALELCKK-MTENGV--GPDLVTHNIVLSALKNGAQYSKAISYFEIMKGAN-VTSDT 151
Query: 370 FVYKM--EAYAKIGEFMKSLEIFREMQERLGSA--SVPAYHKIIELLCKAEETELTESLM 425
F + KIG+ +++E+F M+ER V Y I+ C + E +++
Sbjct: 152 FTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIF 211
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKN 483
V G+KP + +Y +L Y + GMH R LA ++K RP+ Y L +
Sbjct: 212 DLMVAEGVKPNIVAYNSLLGAYASRGMH-REALAIFNLIKKNGLRPDIVSYTSLLNAYGR 270
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
+ EKA E+FN M + + N S N ++ AY S+G
Sbjct: 271 SAQPEKAREVFNKMKKN-SCKPNKVSYNALIDAYGSAG 307
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 199 CRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN 258
C+ IFD ++ +G P+ + ++ L+ AY S +G EA +I+N +I+ G +P +
Sbjct: 207 CKAIFDLMVAEGVKPNIVAYNSLLGAYAS---RGMHREALAIFN-LIKKNGLRPDIVSYT 262
Query: 259 SLFRAL--VSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERI 316
SL A ++P ++A +F+ + + + K Y+ LI + + KE +
Sbjct: 263 SLLNAYGRSAQP--------EKAREVFNKMKKNSCKPNKVSYNALIDAYG-SAGMLKEAV 313
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEA 376
LL EM++ G + + ++L C + + E + T A+ +++
Sbjct: 314 GLLH-EMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKS 372
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
Y G++ K+LE++ M+E Y+ +I
Sbjct: 373 YLSFGDYEKALELYTSMRESNVKPDAVTYNILI 405
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 69/165 (41%), Gaps = 16/165 (9%)
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
YA+ + ++ +F EMQE Y+ +I +A + ++M++ + + P
Sbjct: 21 YARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPT 80
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLEKCR--------PNRTIYGIYLESLKNAGNIE 488
+Y N+ N G + + LE C+ P+ + I L +LKN
Sbjct: 81 RTTYNNVINACGAAG-------NWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
KA F M + +T + NII+ + G +A ++++ M
Sbjct: 134 KAISYFEIMKG-ANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSM 177
>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
Length = 1014
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 14/251 (5%)
Query: 203 FDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFR 262
+ ++ +G P + F ILI A+ + + A ++N M L R S + +
Sbjct: 717 LEKMVLEGIFPDRLVFDILITAFSE---KSKMHNALQLFNCMKWL-----RMSPSSKTYS 768
Query: 263 ALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKE 322
A+++ G + K YL Q+ + +L GL+ Y L+ ID R LK+E
Sbjct: 769 AMIN--GLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKID--RAFRLKEE 824
Query: 323 MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIG 381
M+ G S++R K G +E+A + ++ S +PT A F M K
Sbjct: 825 MKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRS-GMVPTVATFTTLMHCLCKES 883
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ +L + R M+ V +Y+ +I LCK + L +E G+ P + +YI
Sbjct: 884 KIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYI 943
Query: 442 NLTNMYLNLGM 452
LT + G+
Sbjct: 944 TLTGAMYSTGI 954
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/393 (19%), Positives = 154/393 (39%), Gaps = 20/393 (5%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
RI+ + F + + M + + T + + G E K +F+ ++ Q VPS
Sbjct: 304 RIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFG-EGKINHAHYVFNHMLRQTFVPSV 362
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP----------RPSLHNSLFRALV 265
T+ +I Y +D+A S+ + M Q+ G P + L + + +V
Sbjct: 363 ATYTTMIDGYCRNRR---IDKALSVLSEM-QITGVMPSEISKAKQILKSMLEDGIDPDIV 418
Query: 266 SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
+ +++ + +AE + S ++I D S + SY + + M +
Sbjct: 419 TYSALINEGMITEAEHFRQYM--SRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVR 476
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMK 385
G ++LR + G + A++ LL+ + I F + K G +
Sbjct: 477 YGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDE 536
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+L++ +M + + Y ++ C+ + +++ ++ G+ P +Y L N
Sbjct: 537 ALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLN 596
Query: 446 MYLNLGMHDRLHLAFSE--CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
+N G F E C E + Y + GNI + + + M+ + +
Sbjct: 597 GLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSE-V 655
Query: 504 GVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
N+ S NI++ Y+ G F K+ +Y M K
Sbjct: 656 YPNSASYNILMHGYVKGGQFSKSLYLYKYMVRK 688
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 143/391 (36%), Gaps = 106/391 (27%)
Query: 199 CRDIFDD---IINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS 255
C IF II++ + + F +L+ AY+ + LD A ++ + G++ P
Sbjct: 134 CTAIFTSLLRIISRFDSTNHVVFELLVKAYVKE--RKVLDAAVAVL--FMDDCGFKASPI 189
Query: 256 LHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
N++ RALV + G SKY +L E + HN D+ + I L+S N
Sbjct: 190 ACNTILRALVEQ--GESKYVWLFLRESLAHNF-------PLDVTTCNILLNSLCTN---- 236
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM 374
E ++A E +L ++ C V + N I +
Sbjct: 237 ------GEFRKA------EDMLQKMKTCRLSNSV------------TYNTI--------L 264
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
Y K G F +L + +M+ A + Y+ +I+ LC+ + + L+K + +
Sbjct: 265 HWYVKKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLI 324
Query: 435 PLMPSYINLTNMYLNLGMHDRLHLAFSECLEK----------------CRPNRT------ 472
P +Y L N + G + H F+ L + CR R
Sbjct: 325 PDECTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSV 384
Query: 473 -----IYGIY-------------------------LESLKNAGNIEKAEEIFNHMHSDQT 502
I G+ +L N G I +AE +M S
Sbjct: 385 LSEMQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALINEGMITEAEHFRQYM-SRMK 443
Query: 503 IGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
I ++ S N I+ +Y G+ V+A +YD M
Sbjct: 444 ISFDSVSFNCIIDSYCHRGNIVEAFTVYDAM 474
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 162/387 (41%), Gaps = 30/387 (7%)
Query: 158 RENETGF---RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
R N GF R + W ++ L + +G ++FA D ++ +G
Sbjct: 86 RCNNLGFSAHRFFLWAKSIPGFQHSVMSFHILVEILGSCKQFAILWDFLIEM--RGSCHY 143
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY 274
E+ I + + + D A +NRM + G LF +K ++
Sbjct: 144 EINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGIKPTINDFDKLLFILCKTKHVKQAQQ 203
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
+ QA+ F LLT+ YS LI + D D E+ E+ QA E+G V
Sbjct: 204 FFDQAKNRF--LLTA------KTYSILI--SGWGDIGDSEK----AHELFQAMLEQGCPV 249
Query: 335 LL----SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLE 388
L ++L+ K G V++A+ + +L + AF Y + +Y + +L
Sbjct: 250 DLLAYNNLLQALCKGGCVDEAKTIFHDMLSKR--VEPDAFTYSIFIHSYCDADDVQSALR 307
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+ +M+ +V Y+ II+ LCK E E L+ E + G++P SY + +
Sbjct: 308 VLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEAYLLLDEMISRGVRPDTWSYNAIQAYHC 367
Query: 449 NLGMHDR-LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
+ +R + L F + C P+R Y + L+ L G +K +++ +M D+ +
Sbjct: 368 DHCEVNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIGRFDKVTKVWGNM-GDKKFYPSV 426
Query: 508 RSCNIILSAYL-SSGDFVKAEKIYDLM 533
+ ++++ + G +A K +++M
Sbjct: 427 STYSVMIHGFCKKKGKLEEACKYFEMM 453
>gi|46518477|gb|AAS99720.1| At2g19280 [Arabidopsis thaliana]
gi|62319953|dbj|BAD94048.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|110738808|dbj|BAF01327.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 693
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 14/251 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS-L 260
IF +I G +P + + +I Y + G D+A + +++ G P PSL S +
Sbjct: 395 IFQEIFELGLLPDCVCYTTMIDGYCNL---GRTDKAFQYFGALLKSG--NP-PSLTTSTI 448
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
S+ G +S AE +F N+ T GL++ Y+ L +H Y ++ L
Sbjct: 449 LIGACSRFGSIS-----DAESVFRNMKTEGLKLDVVTYNNL--MHGYGKTHQLNKVFELI 501
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
EM+ AG ++ G +++A + L+ T AF + ++K
Sbjct: 502 DEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKR 561
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G+F ++ ++ M + V ++ CKA+ E L + ++ G+KP + Y
Sbjct: 562 GDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLY 621
Query: 441 INLTNMYLNLG 451
L + Y ++G
Sbjct: 622 NTLIHGYCSVG 632
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
++ + K+G+ +++++ + R ++ Y + +C + ++ +E E G+
Sbjct: 348 IDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL 404
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-PNRTIYGIYLESLKNAGNIEKAEE 492
P Y + + Y NLG D+ F L+ P+ T I + + G+I AE
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAES 464
Query: 493 IFNHMHSD 500
+F +M ++
Sbjct: 465 VFRNMKTE 472
>gi|15224753|ref|NP_179518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334184304|ref|NP_001189552.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546774|sp|Q6NKW7.2|PP164_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g19280
gi|3135258|gb|AAC16458.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251769|gb|AEC06863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251770|gb|AEC06864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 693
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 14/251 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS-L 260
IF +I G +P + + +I Y + G D+A + +++ G P PSL S +
Sbjct: 395 IFQEIFELGLLPDCVCYTTMIDGYCNL---GRTDKAFQYFGALLKSG--NP-PSLTTSTI 448
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
S+ G +S AE +F N+ T GL++ Y+ L +H Y ++ L
Sbjct: 449 LIGACSRFGSIS-----DAESVFRNMKTEGLKLDVVTYNNL--MHGYGKTHQLNKVFELI 501
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
EM+ AG ++ G +++A + L+ T AF + ++K
Sbjct: 502 DEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKR 561
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G+F ++ ++ M + V ++ CKA+ E L + ++ G+KP + Y
Sbjct: 562 GDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLY 621
Query: 441 INLTNMYLNLG 451
L + Y ++G
Sbjct: 622 NTLIHGYCSVG 632
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
++ + K+G+ +++++ + R ++ Y + +C + ++ +E E G+
Sbjct: 348 IDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL 404
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-PNRTIYGIYLESLKNAGNIEKAEE 492
P Y + + Y NLG D+ F L+ P+ T I + + G+I AE
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAES 464
Query: 493 IFNHMHSD 500
+F +M ++
Sbjct: 465 VFRNMKTE 472
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 134/346 (38%), Gaps = 44/346 (12%)
Query: 176 YRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLD 235
Y F FAL + + G E R I ++ G + LI Y S GC++
Sbjct: 109 YTFTFALKS-CGSFSGVEEG----RQIHGHVLKTGLGDDLFIQNTLIHLYASC---GCIE 160
Query: 236 EACSIYNRMIQ---------LGGYQPRP--SLHNSLFRALVSK---------PGGLSKYY 275
+A + +RM++ L Y R L LF + + G +
Sbjct: 161 DARHLLDRMLERDVVSWNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGL 220
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
L++A +F G K++ S + Y + +L ++MQ AG + L
Sbjct: 221 LEEARRVF------GETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTL 274
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM 393
+SVL CA G + E W+ NGI FV ++ Y+K G K+LE+F
Sbjct: 275 VSVLSACAHVGALSQGE--WVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSC 332
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
+ + ++ II L + + E + G KP +++ + + G+
Sbjct: 333 LRK----DISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLL 388
Query: 454 DRLHLAFSEC--LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
D F+ + +P YG ++ L G +E+AEE+ M
Sbjct: 389 DEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKM 434
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 133/308 (43%), Gaps = 27/308 (8%)
Query: 235 DEACSIYNRMIQLGGYQPRPSL--HNSLFRALV-SKPGGLSKYYLQQAEF--IFHNLLTS 289
D+A +++ MI+ +P PSL + F A+ +K L + +Q E I HN+ T
Sbjct: 70 DDAIALFQEMIR---SRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT- 125
Query: 290 GLEIQKDIYSGLI-WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
L I + + +Y S+L K M+ G+E ++++ EG V
Sbjct: 126 -LNIMINCFCRCCKTCFAY---------SVLGKVMK-LGYEPDTTTFNTLIKGLFLEGKV 174
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
+A R++E NG Y + + G+ +L++ R+M+ER A V Y
Sbjct: 175 SEAVVLVDRMVE--NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK 466
II+ LC+ + SL KE G+K + +Y +L G + L + + +
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 467 -CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
PN + + L+ G +++A E++ M + + I N + N ++ Y +
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT-RGISPNIITYNTLMDGYCMQNRLSE 351
Query: 526 AEKIYDLM 533
A + DLM
Sbjct: 352 ANNMLDLM 359
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 69/383 (18%), Positives = 148/383 (38%), Gaps = 46/383 (12%)
Query: 232 GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGL 291
GC+D A S++ M + G + +NSL R L K G + L + +
Sbjct: 242 GCIDAAISLFKEM-ETKGIKSSVVTYNSLVRGL-CKAGKWNDGALLLKDMVSR------- 292
Query: 292 EIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
EI ++ + + L + + + L KEM G +++ + + +A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 352 EKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
++ + F ++ Y + +++FR + +R A+ Y +++
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSY----------------------INLTNMYLN 449
C++ + +L E L +E V G+ P + +Y + + M L
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 450 LGMH--------------DRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
+ M+ D +L S + +PN Y + + L G++ +A +
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 496 HMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLN 555
M D N + N ++ A+L GD + K+ + M + +++ ++ + +L
Sbjct: 533 KMEEDGN-APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA 591
Query: 556 RKEVKKPVSLNLSSEQRENLIGL 578
K + L+ S+ R++L+ L
Sbjct: 592 MKRLTLRYCLSKGSKSRQDLLEL 614
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 137/340 (40%), Gaps = 47/340 (13%)
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
QG +D A S + +M++ G +P +N++ A + A IF +L G
Sbjct: 462 QGKVDAATS-FLKMMEQKGIEPNVVFYNNMMLAHCRMKN------MDLARSIFSEMLEKG 514
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
LE YS I + + N D++ + +M + FE + + +++ K G
Sbjct: 515 LEPNNFTYS--ILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 351 AEKTWLRLL-ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV------- 402
A++ L+ E + ++ ++ + K+G+ ++E +REM E S +V
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 403 ----------------------------PAYHKIIELLCKAEETELTESLMKEFVETGMK 434
PAY +I+ CK + + +L E E G+
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLM 692
Query: 435 PLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEI 493
P + Y +L + + NLG M + L + + Y ++ L GNI A ++
Sbjct: 693 PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDL 752
Query: 494 FNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++ + D I + ++++ G F+KA K+ + M
Sbjct: 753 YSELL-DLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 25/252 (9%)
Query: 177 RFDFALATKLADYM----GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQG 232
RF F L + +Y+ + ++ D F ++++ VP F + LS+ V+
Sbjct: 162 RFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVP----FVPYVNNVLSSLVRS 217
Query: 233 CL-DEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGL 291
L DEA IYN+M+ +G + L RA L + ++A IF +++ G
Sbjct: 218 NLIDEAKEIYNKMVLIGVAGDNVTTQ-LLMRA------SLRERKPEEAVKIFRRVMSRGA 270
Query: 292 EIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
E ++S + ++ + LL++ + G +E SV+ KEG++E+A
Sbjct: 271 EPDGLLFSLAVQAACKTPDLVMA-LDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEA 329
Query: 352 EKTWLRLLESDNGIPTPAFVYK----MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
+R+++ G P V + Y K E K+L++F M+E + +
Sbjct: 330 ----VRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSV 385
Query: 408 IIELLCKAEETE 419
++E CK E E
Sbjct: 386 MVEWFCKNMEME 397
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 131/322 (40%), Gaps = 21/322 (6%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
+ + + +DIFD ++ +G P+ +++ L+ Y + +GC S+ N M+ G
Sbjct: 274 RHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAA---EGCFANMNSLVNLMVS-KGIV 329
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P N L A ++ G + K A IF ++ G+ ++ +I S I
Sbjct: 330 PNHRFFNILINAY-ARCGMMDK-----AMLIFEDMQNKGMIPDTVTFATVI---SSLCRI 380
Query: 312 DKERISLLK-KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
+ +L K M G + V +++ C G++ A++ ++ D IP P
Sbjct: 381 GRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKD--IPPPGV 438
Query: 371 VY---KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
Y + K G + +I M + +V ++ ++E C E +L+
Sbjct: 439 KYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 498
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGN 486
G++P Y L + Y G D F + L K +P +Y I L L A
Sbjct: 499 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARR 558
Query: 487 IEKAEEIFNHM-HSDQTIGVNT 507
A+++F+ M S T+ + T
Sbjct: 559 TTAAKKMFHEMIESGTTVSIQT 580
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
E A + RLL + G ++ ++ ++K GE K+ E+F +M E+ S V Y+ +
Sbjct: 139 ELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSL 198
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE------ 462
I+ LCK +E +E ++++ V+ G++P +Y +L Y GM F E
Sbjct: 199 IDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGL 258
Query: 463 --CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSS 520
C+ C ++ +L I++A++IF+ M + N S + +L Y +
Sbjct: 259 IPCVVNCNS-------FIHALCRHNRIKEAKDIFDSM-VLKGPKPNIISYSTLLHGYAAE 310
Query: 521 GDFVKAEKIYDLMCLK 536
G F + +LM K
Sbjct: 311 GCFANMNSLVNLMVSK 326
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 113/248 (45%), Gaps = 29/248 (11%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
IF+D+ N+G +P +TF +I + G LD+A +N M+ +G PS +++
Sbjct: 354 IFEDMQNKGMIPDTVTFATVISSLCRI---GRLDDALHKFNHMVDIG---VPPS--EAVY 405
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYS-GLIWLHSYQDNIDKE-RISLL 319
R L+ G + L +A+ + ++ KDI G+ + S +N+ KE R++
Sbjct: 406 RCLIQ--GCCNHGELVKAKELISEMM------NKDIPPPGVKYFSSIINNLFKEGRVAEG 457
Query: 320 KKEMQ---QAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES--DNGIPTPAFVYK- 373
K M Q G S++ G++E+A LL++ GI ++Y
Sbjct: 458 KDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEA----FALLDAMASIGIEPNCYIYGT 513
Query: 374 -MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++ Y K G +L +FR+M + + Y+ I+ L +A T + + E +E+G
Sbjct: 514 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESG 573
Query: 433 MKPLMPSY 440
+ +Y
Sbjct: 574 TTVSIQTY 581
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 141/349 (40%), Gaps = 29/349 (8%)
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
E FA + + ++++G VP+ F+ILI AY G +D+A I+ M Q G
Sbjct: 308 AAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARC---GMMDKAMLIFEDM-QNKGM 363
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
P F ++S + + L A F++++ G+ + +Y LI
Sbjct: 364 IP----DTVTFATVISSLCRIGR--LDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGE 417
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
+ K + L+ + M + G + S++ KEG V + + ++++ F
Sbjct: 418 LVKAK-ELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTF 476
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
ME Y +G ++ + M + Y +++ CK + ++ ++ +
Sbjct: 477 NSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLH 536
Query: 431 TGMKPLMPSYINLTNMYLNLGMHDRLHL--------AFSECLEK-CRPNRTIYGIYLESL 481
G+KP T++ N+ +H F E +E + YG+ L L
Sbjct: 537 KGVKP--------TSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGL 588
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
++A + + + + + + NI++SA L G +A++++
Sbjct: 589 CRNNCTDEANMLLEKLFA-MNVKFDIITFNIVISAMLKVGRRQEAKELF 636
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 105/247 (42%), Gaps = 18/247 (7%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
KE + A+ +DI D ++ G+ P+ +TF+ L+ Y + G ++EA ++ + M + G +
Sbjct: 450 KEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYC---LVGNMEEAFALLDAMASI-GIE 505
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P ++ +L G + A +F ++L G++ +Y+ I LH
Sbjct: 506 PNCYIYGTLVD------GYCKNGRIDDALTVFRDMLHKGVKPTSVLYN--IILHGL---F 554
Query: 312 DKERISLLKK---EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
R + KK EM ++G + VL + ++A +L +
Sbjct: 555 QARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 614
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
F + A K+G ++ E+F + +V Y+ +I L K E E ++L
Sbjct: 615 TFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISV 674
Query: 429 VETGMKP 435
++G P
Sbjct: 675 EKSGRAP 681
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 8/195 (4%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
+KEG+V+ A + + +++E + ++ K E +KS + +M + +
Sbjct: 168 SKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNN 227
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF-- 460
Y+ +I A + + + KE +G L+P +N + L H+R+ A
Sbjct: 228 KTYNSLIYGYSTAGMWKESVRVFKEMSSSG---LIPCVVNCNSFIHALCRHNRIKEAKDI 284
Query: 461 --SECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
S L+ +PN Y L G + N M S + I N R NI+++AY
Sbjct: 285 FDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVS-KGIVPNHRFFNILINAYA 343
Query: 519 SSGDFVKAEKIYDLM 533
G KA I++ M
Sbjct: 344 RCGMMDKAMLIFEDM 358
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 16/279 (5%)
Query: 134 ILNAQKKW-LRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
+ +A KW LR +Y L +R+ + + GFR+ M+ + D + L + +
Sbjct: 150 VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS-GVQPDVYTYSVLINGL 208
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
KE K ++FD+++ +G +P+ +TF LI G +D A IY RM+
Sbjct: 209 CKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCK---NGRVDLAMEIYKRMLS-QSL 264
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
P +N+L L K L+QA + + GL+ K Y+ LI + +
Sbjct: 265 LPDLITYNTLIYGLCKKGD------LKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 318
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
+D +K M Q +++ +EG DAEK +L D T +
Sbjct: 319 LDTAFEH--RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTY 376
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
+ + K G+ K ++ +EMQ + SV Y+ ++
Sbjct: 377 TMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLM 415
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+E K+ F + E+ E AS+ ++ ++ CK + + +S+ + G+
Sbjct: 100 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 159
Query: 434 KPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
+P + SY L N Y+ LG + + L + +P+ Y + + L ++ A E
Sbjct: 160 RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE 219
Query: 493 IFNHM 497
+F+ M
Sbjct: 220 LFDEM 224
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 86/218 (39%), Gaps = 14/218 (6%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD---NGIPTPAFVYKME 375
LK M +G + ++ KE ++DA + + +L NG+ F ++
Sbjct: 185 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV---TFTTLID 241
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
K G ++EI++ M + + Y+ +I LCK + + L+ E G+KP
Sbjct: 242 GRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKP 301
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSE----CLEKCRPNRTIYGIYLESLKNAGNIEKAE 491
+Y L + G L AF E R + Y + L G AE
Sbjct: 302 DKFTYTTLIDGCCKEG---DLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 358
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
++ M S + +T + +I++ + GD K K+
Sbjct: 359 KMLREMLS-VDLKPDTGTYTMIINEFCKKGDVWKGSKL 395
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 126/288 (43%), Gaps = 17/288 (5%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P +F I+I + G LD A S++ M+++G Q L+N+L L S L
Sbjct: 455 PDTTSFSIVIDGLCNT---GKLDLALSLFRDMVRVGCKQ-NVLLYNNLIDKL-SNSNRLE 509
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE-G 331
+ YL + + SG + ++ + ++++ + +EM+ G E
Sbjct: 510 ECYL-----LLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALD--MVREMRVHGHEPWI 562
Query: 332 KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIF 390
K L V ++C ++ E +L + + +P A+ ++ + KI ++LEIF
Sbjct: 563 KHYTLLVKQLCKRKRSAEAC--NFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIF 620
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
R++ R V AY+ +I CK + ++ E V G+ P + +Y L + +
Sbjct: 621 RDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKN 680
Query: 451 GMHDRLHLAFSECLEKCR-PNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
G D+ S + K R PN Y ++ L NAG + A ++N M
Sbjct: 681 GDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEM 728
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 116/277 (41%), Gaps = 16/277 (5%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQ--GRVPSEMTF 218
+ +R + W Q + + +A + R+ A + DI+N P + F
Sbjct: 109 KIAYRFFNWASDQGGFNHNCYTYNAMASCLSHARQNAPLSLLSMDIVNSRCAMSPGALGF 168
Query: 219 HILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQ 278
I + G ++EA +++++ + P N L A +SK G + ++
Sbjct: 169 FIRCLGS-----TGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEA-ISKSGSIDLVEMRL 222
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
E + SG E D Y+ L +Y ++ ++ + E+ G+ +G + + V
Sbjct: 223 KE-----MCDSGWE--PDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSILV 275
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
L +K G+V+ A + R+ + + F + + + K+L++F++MQ+
Sbjct: 276 LTF-SKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGF 334
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ V Y +I LC +E E L+ E E G+ P
Sbjct: 335 APDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDP 371
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 142/359 (39%), Gaps = 18/359 (5%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L +Y+ K + + R FD +I +G PS T+ I++ Y + +G L E + N M+
Sbjct: 314 LLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYAT---KGALSEMHDLLNLMV 370
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
G P + N F A +K G + K A IF+ + GL Y LI
Sbjct: 371 A-NGISPNHHIFNIFFSA-YAKCGIIDK-----AMDIFNKMRQQGLSPDAVSYGALIDAL 423
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+D + +M G V S++ E E+ + +L + GI
Sbjct: 424 CKLGRVDDAEVKF--NQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEML--NVGI 479
Query: 366 -PTPAFVYKMEA-YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
P F + K G M+ + ++ V +Y+ +I+ C A +
Sbjct: 480 HPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASK 539
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLK 482
L++ V G+KP SY L + Y G D + F + L P Y L L
Sbjct: 540 LLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLF 599
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIE 541
+A+E++ +M + T + + NIIL+ S +A K++ +C K ++
Sbjct: 600 QTKRFSEAKELYLNMINSGT-KWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLN 657
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G+ K +F EM +R V Y +I+ LCKA+ + E++ ++ ++ G+KP + +Y
Sbjct: 217 GQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTY 276
Query: 441 INLTNMYLNLGMHDRLHLAFSE-CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
L + YL++G + E +PN YG L L G +A F+ M
Sbjct: 277 NCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIG 336
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ I + + I+L Y + G + + +LM
Sbjct: 337 -KGIKPSVTTYGIMLHGYATKGALSEMHDLLNLM 369
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 87/218 (39%), Gaps = 12/218 (5%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAK 379
EM G +V+ K + AE + +++ DNG+ Y + Y
Sbjct: 228 EMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMI--DNGVKPNIDTYNCLIHGYLS 285
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
IG++ + + + EM + Y ++ LCK + G+KP + +
Sbjct: 286 IGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTT 345
Query: 440 YINLTNMYLNLG----MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
Y + + Y G MHD L+L + + PN I+ I+ + G I+KA +IFN
Sbjct: 346 YGIMLHGYATKGALSEMHDLLNLMVANGIS---PNHHIFNIFFSAYAKCGIIDKAMDIFN 402
Query: 496 HMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M Q + + S ++ A G AE ++ M
Sbjct: 403 KMRQ-QGLSPDAVSYGALIDALCKLGRVDDAEVKFNQM 439
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 149/366 (40%), Gaps = 16/366 (4%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D L DY+ K + + R +FD + +G P T+ L+ Y + +G L E
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT---KGALVEMH 359
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
+ + M++ G P ++ +F L+ K + QA +F + GL Y
Sbjct: 360 GLLDLMVR-NGIHP----NHYVFSILICAYAKQGK--VDQAMLVFSKMRQQGLNPDTVTY 412
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+I + ++ ++M G V S++ + A++ L +
Sbjct: 413 GTVIGILCKSGRVEDAMRYF--EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELLCKAEE 417
L+ + T F ++++ K G ++S ++F ++ R+G + Y +I+ C A +
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPDIITYSTLIDGYCLAGK 529
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGI 476
+ L+ V GMKP +Y L N Y + M D L L P+ Y I
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
L+ L A+E++ + T + + NIIL + +A +++ +CL
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGT-QLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 648
Query: 537 KYEIES 542
++E+
Sbjct: 649 DLQLET 654
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 143/344 (41%), Gaps = 27/344 (7%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
R +FD+++ +GR S + L+ + A S YNRM + G + P+L
Sbjct: 39 RHVFDELLRRGRGASIYGLN----CALADVARHSPAAAVSRYNRMARAGADEVTPNL--C 92
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
+ L+ + L A N++ G + ++ L+ D + + ++
Sbjct: 93 TYGILIGSCCCAGRLDLGFAAL--GNVIKKGFRVDAIAFTPLLK-GLCADKRTSDAMDIV 149
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEA 376
+ M Q G +L+ E ++A + L+++ D G P ++ +
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE-LLQMMPDDGGDCPPDVVSYTTVING 208
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
+ K G+ K+ + EM +R +V Y II LCKA+ + ++ V+ G+ P
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 437 MPSYINLTNMYLN-------LGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEK 489
+Y ++ + Y + +G ++H S+ +E P+ Y ++ L G +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMH---SDGVE---PDVVTYNSLMDYLCKNGRCTE 322
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A ++F+ M + + + + +L Y + G V+ + DLM
Sbjct: 323 ARKMFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 141/340 (41%), Gaps = 22/340 (6%)
Query: 205 DIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL 264
+++ Q P+ +T++ +I + + +G + I M + GG P + ++
Sbjct: 137 ELLRQMPSPNAVTYNTVIAGFCA---RGRVQAGIEIMREMRERGGIAPDKYTYATVIS-- 191
Query: 265 VSKPGGLSKYYLQQAEFIFHNLLTSG-LEIQKDIYSGLIWLHSYQDNIDKERISL-LKKE 322
G ++ A +F +LT G +E +Y+ LI + Q N++ ++L + E
Sbjct: 192 ----GWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLE---VALRYRGE 244
Query: 323 MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKI 380
M G + EG +A + E G+ AF Y + Y K
Sbjct: 245 MVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGE--KGLAPDAFTYNILINGYCKE 302
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G+ K++++F M + A+V Y +I L + T+ L + V G++P + Y
Sbjct: 303 GKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMY 362
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
L N + G DR E +EK R P+ Y + L G +++A + M
Sbjct: 363 NALINSHCTGGDMDRAFEIMGE-MEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEM- 420
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKY 538
+ + I + S N ++S Y GD A K+ D M K +
Sbjct: 421 TKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGF 460
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 115/255 (45%), Gaps = 20/255 (7%)
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
E + A+ + +++ +G P T++ILI Y +G +A ++ M+ G +
Sbjct: 267 EGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCK---EGKEKKAMKMFEVMVG-KGIRA 322
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+ SL AL K G+ +Q+ + +F++ + G+ +Y+ LI H ++D
Sbjct: 323 TVVTYTSLIHALSMK--GM----VQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMD 376
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE--SDNGIPTPAF 370
R + EM++ +++R G +++A L+E + GI
Sbjct: 377 --RAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARG----LIEEMTKRGIQPDLV 430
Query: 371 VYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
Y + Y+ G+ ++++ EM + + ++ Y+ +I+ LC + E L+KE
Sbjct: 431 SYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEM 490
Query: 429 VETGMKPLMPSYINL 443
V G+ P +YI+L
Sbjct: 491 VGNGITPDDSTYISL 505
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 75/389 (19%), Positives = 158/389 (40%), Gaps = 26/389 (6%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFD-FALATKLADYMGKERKFAKCRDIFDDI 206
T +A C R R + G + M ++ D + AT ++ + K K +FD++
Sbjct: 152 TVIAGFCARGRV-QAGIEIMREMRERGGIAPDKYTYATVISGWC-KVGKVEDATKVFDEM 209
Query: 207 INQGRV-PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV 265
+ +G+V P+ + ++ LI Y QG L+ A M+ G + +N L
Sbjct: 210 LTEGKVEPNAVMYNALIGGYCD---QGNLEVALRYRGEMVDRG-VSMTVATYNLFVHTL- 264
Query: 266 SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
+ +A + + GL D ++ I ++ Y +++ + + M
Sbjct: 265 -----FMEGRAAEAHALVEEMGEKGL--APDAFTYNILINGYCKEGKEKKAMKMFEVMVG 317
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEF 383
G S++ + +G V++ ++ + + GI F+Y + ++ G+
Sbjct: 318 KGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVR--RGIRPDLFMYNALINSHCTGGDM 375
Query: 384 MKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINL 443
++ EI EM+++ + Y+ ++ LC + L++E + G++P + SY L
Sbjct: 376 DRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTL 435
Query: 444 TNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQT 502
+ Y G + D + + + P Y ++ L G AE++ M +
Sbjct: 436 ISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGI 495
Query: 503 IGVNTRSCNIILSAY-----LSSGDFVKA 526
++ ++I L++GD VKA
Sbjct: 496 TPDDSTYISLIEGLTTEDERLAAGDDVKA 524
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/406 (20%), Positives = 156/406 (38%), Gaps = 38/406 (9%)
Query: 156 RIRENETGFRVYEWMMQQHWYR--FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
+I + G +EW +Q D + + L + + R F + ++ + + ++ +P
Sbjct: 70 QIHDPRLGLNFFEWASKQSTLSNSLDGFVCSSLLKLLARFRVFKEIENLLETMKSKELIP 129
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV-------- 265
+ +I AY + G + EA +YN +I + P NSL LV
Sbjct: 130 TCEALSFVISAYAGS---GLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIA 186
Query: 266 --------SKPGGLSKYYL-------------QQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
+ G + Y + ++ + G Y+ LI
Sbjct: 187 RKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLI-- 244
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
Y N D ER +LL KE++ GF + +++ K+G E +K + + E
Sbjct: 245 DGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLA 304
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
+ F ++A K G +++ + R M E + Y+ +I C + E L
Sbjct: 305 VSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEEL 364
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI-YGIYLESLKN 483
++ + G+ P SY L + + G + R E E+ I YG + L
Sbjct: 365 LEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVV 424
Query: 484 AGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
AG ++ A + + M ++ I + N+++S G F A+++
Sbjct: 425 AGEVDVALTVRDKMM-ERGILPDANIYNVLMSGLCKKGRFPAAKQL 469
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 92/454 (20%), Positives = 175/454 (38%), Gaps = 70/454 (15%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L K ++ + ++ ++ +G + + L+ + V G +D A ++ ++
Sbjct: 381 TPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLV---VAGEVDVALTVRDK 437
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M++ G P +++N L L K G E + N+ + + G I
Sbjct: 438 MME-RGILPDANIYNVLMSGLCKK-GRFPAAKQLLVEMLDQNVTPDAF-VNATLVDGFI- 493
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL----SVLRVCAKEGDVEDAEKTWLRLL 359
N+D+ K++ Q E G + + ++++ K G + DA + R+
Sbjct: 494 ---RHGNLDE------AKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMF 544
Query: 360 ESDNGIPTP-AFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
NG+ +P F Y ++ Y K + +L +F M ++ +V + +I C+
Sbjct: 545 ---NGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNG 601
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYG 475
+ E + +E G +P + +Y L + G + F + L KC PN +
Sbjct: 602 DLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFN 661
Query: 476 IYLESLKNAGNIEKAE-----------EIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFV 524
+ L N I + E F M SD G + R ++AY S
Sbjct: 662 YLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISD---GWDWR-----IAAYNSI---- 709
Query: 525 KAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLC 584
L+CL ++++ ++ D ++S + PVS LL GLC
Sbjct: 710 -------LLCLCQHKMVKPALQLHDKMMS--KGFPPDPVSFI-----------ALLHGLC 749
Query: 585 IESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQY 618
+E + ++I FNE +V DQ+
Sbjct: 750 LEGRLQDWNNVIPCNFNERQLQIAVKYSEKLDQF 783
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 13/240 (5%)
Query: 155 MRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
+R+ + + GFR+ + M D T L + + KE K + ++F++++++G VP+
Sbjct: 182 IRLGDLDKGFRL-KTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPN 240
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY 274
+TF LI + + G +D A IY +M++ GY P +N+L L K
Sbjct: 241 GVTFTTLIDGHCKS---GRVDLALEIYKQMLR-QGYSPDLITYNTLIYGLCRKGD----- 291
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
L+QA + + GL+ K Y+ LI + D E L+K M +
Sbjct: 292 -LKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEG--DLETAFELRKRMIEESIRLDDVA 348
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
+++ +EG DAEK +L + + + K G+ + ++ +EMQ
Sbjct: 349 YTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQ 408
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 2/164 (1%)
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
++E+ E S+ ++ ++ CK E L +S+ + G++P + S+ L N Y+
Sbjct: 124 YKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIR 183
Query: 450 LGMHDR-LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTR 508
LG D+ L + P+ + + L +++A E+FN M D+ + N
Sbjct: 184 LGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEM-LDKGLVPNGV 242
Query: 509 SCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVL 552
+ ++ + SG A +IY M + Y + L Y L
Sbjct: 243 TFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGL 286
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 106/260 (40%), Gaps = 14/260 (5%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
++ A+ +F + GL ++ LI + ++DK LK M +G
Sbjct: 152 IRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKG--FRLKTAMHASGVHPDVYTN 209
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESD---NGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
++ KE +++A + + +L+ NG+ F ++ + K G +LEI+++
Sbjct: 210 TVLINGLCKESKMDEANELFNEMLDKGLVPNGV---TFTTLIDGHCKSGRVDLALEIYKQ 266
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG- 451
M + S + Y+ +I LC+ + + L+ E G+KP +Y L + G
Sbjct: 267 MLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGD 326
Query: 452 MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTR--S 509
+ L E R + Y + L G AE++ M S +G+ +
Sbjct: 327 LETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLS---VGLKPENGT 383
Query: 510 CNIILSAYLSSGDFVKAEKI 529
+I++ + GD A K+
Sbjct: 384 YTMIINGFCKQGDVKTASKL 403
>gi|111154024|dbj|BAF02664.1| pentatricopeptide repeat protein [Physcomitrella patens]
gi|111185880|dbj|BAF02672.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 531
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 30/294 (10%)
Query: 209 QGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKP 268
QG P + + L+ AY +G +EA + M+ +G RP + ALV+
Sbjct: 244 QGLQPDAIAYTALVHAYAQ---EGLWEEAEKTLSDMLDVGIVDDRP------YAALVAAY 294
Query: 269 G--GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQA 326
G GL+ I + SG+E +Y+ LI +HS + +K R L + MQ
Sbjct: 295 GKAGLT----DNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVL--QLMQAD 348
Query: 327 GFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI-PTP-AFVYKMEAYAKIGEFM 384
G + + SV+ ++ AE + + GI P P ++ + AY + G
Sbjct: 349 GCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRA--GIQPGPVSYGVLISAYCRAGRLG 406
Query: 385 KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT 444
+ I R MQ +V Y+ +I A+ E + + + G++P ++ L
Sbjct: 407 DAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRPDAVTFNTLI 466
Query: 445 NMYLNLGMHDRLHLAFSECLEK-----CRPNRTIYGIYLESLKNAGNIEKAEEI 493
+MY+ R +C + C+PN Y I L++ + N AE I
Sbjct: 467 SMYI----KSRKRKQAEDCYIRMQQLGCKPNAVTYKILLKAYTDYNNSIDAERI 516
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 152/381 (39%), Gaps = 64/381 (16%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R+R+ T F+ +E + D T L GK + + K D+F + + R P +
Sbjct: 160 RMRDAMTIFKRFEG----AGLKPDVVSYTALIQGFGKLKSYNKVTDVFSRM-QRNRCPPD 214
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+ ++++ L E+ Y Q G QP + +L A + GL
Sbjct: 215 LKLCTVLISTYGNGGLPVLAESAMQY---AQAQGLQPDAIAYTALVHAYAQE--GL---- 265
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHS---YQDNIDKERISLLKKEMQQAGFEEGK 332
++AE ++L G+ + Y+ L+ + DN++K + + M+ +G E
Sbjct: 266 WEEAEKTLSDMLDVGI-VDDRPYAALVAAYGKAGLTDNVNK-----ILETMKASGVEAST 319
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
+ +++ + +K E A + L+L+++D + EI
Sbjct: 320 TLYNTLINIHSKAEAPEKA-RAVLQLMQADG--------------------CQCDEI--- 355
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN--- 449
Y ++E + ++ + ES+M E G++P SY L + Y
Sbjct: 356 -----------TYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGR 404
Query: 450 LGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
LG +R+ A KC+P IY + + +A +AE +F M D + + +
Sbjct: 405 LGDAERILRAMQN--AKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQ-DCGLRPDAVT 461
Query: 510 CNIILSAYLSSGDFVKAEKIY 530
N ++S Y+ S +AE Y
Sbjct: 462 FNTLISMYIKSRKRKQAEDCY 482
>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Glycine max]
Length = 587
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 106/249 (42%), Gaps = 16/249 (6%)
Query: 292 EIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
E++ +++ + L+S + + + K M Q G + + C+K GDVE A
Sbjct: 156 EVKPHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYIYNCLFHACSKSGDVERA 215
Query: 352 EKTWLRLLESD-NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
E+ L E D G+ F Y + Y K G ++L I M+ + + +Y+ +
Sbjct: 216 EQL---LNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINLDIVSYNSL 272
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC----L 464
I CK E + E+ M+ F E +K P+++ T + + L A C
Sbjct: 273 IYGFCK--EGRMREA-MRMFSE--IKNATPNHVTYTTLIDGYCKTNELEEALKMCKLMEA 327
Query: 465 EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFV 524
+ P Y L L G I A ++ N M S++ + + +CN +++AY GD
Sbjct: 328 KGLYPGVVTYNSILRKLCQDGRIRDANKLLNEM-SERKLQADNITCNTLINAYCKIGDLK 386
Query: 525 KAEKIYDLM 533
A K + M
Sbjct: 387 SALKFKNKM 395
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 125/315 (39%), Gaps = 51/315 (16%)
Query: 134 ILNAQKKW-LRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
+ +A KW LR +Y L +R+ + + GFR+ M+ + D + L + +
Sbjct: 164 VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG-VQPDVYTYSVLINGL 222
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
KE K ++FD+++ +G +P+ +TF LI + G +D A IY M
Sbjct: 223 CKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCK---NGRVDLAMEIYKXM------ 273
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
L SL L++ +N L GL + D+
Sbjct: 274 -----LSQSLLPDLIT-----------------YNTLIYGLCKKGDL------------- 298
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
++ L EM G + K +++ C KEGD++ A K R+++ + + A+
Sbjct: 299 ---KQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAY 355
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
+ + G + + ++ REM + Y II CK + L+KE
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Query: 431 TGMKPLMPSYINLTN 445
G P + +Y L N
Sbjct: 416 NGHVPSVVTYNVLMN 430
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 79/191 (41%), Gaps = 2/191 (1%)
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP 403
+ G + DA + + E +P +E K+ F + E+ E AS+
Sbjct: 84 ESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYPASLY 143
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSE 462
++ ++ CK + + +S+ + G++P + SY L N Y+ LG + + L +
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 203
Query: 463 CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
+P+ Y + + L ++ A E+F+ M I N + ++ + +G
Sbjct: 204 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIP-NGVTFTTLIXGHCKNGR 262
Query: 523 FVKAEKIYDLM 533
A +IY M
Sbjct: 263 VDLAMEIYKXM 273
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 133/308 (43%), Gaps = 27/308 (8%)
Query: 235 DEACSIYNRMIQLGGYQPRPSL--HNSLFRALV-SKPGGLSKYYLQQAEF--IFHNLLTS 289
D+A +++ MI+ +P PSL + F A+ +K L + +Q E I HN+ T
Sbjct: 70 DDAIALFQEMIR---SRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT- 125
Query: 290 GLEIQKDIYSGLI-WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
L I + + +Y S+L K M+ G+E ++++ EG V
Sbjct: 126 -LNIMINCFCRCCKTCFAY---------SVLGKVMK-LGYEPDTTTFNTLIKGLFLEGKV 174
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
+A R++E NG Y + + G+ +L++ R+M+ER A V Y
Sbjct: 175 SEAVVLVDRMVE--NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK 466
II+ LC+ + SL KE G+K + +Y +L G + L + + +
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 467 -CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
PN + + L+ G +++A E++ M + + I N + N ++ Y +
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT-RGISPNIITYNTLMDGYCMQNRLSE 351
Query: 526 AEKIYDLM 533
A + DLM
Sbjct: 352 ANNMLDLM 359
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 62/338 (18%), Positives = 127/338 (37%), Gaps = 46/338 (13%)
Query: 232 GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGL 291
GC+D A S++ M + G + +NSL R L K G + L + +
Sbjct: 242 GCIDAAISLFKEM-ETKGIKSSVVTYNSLVRGL-CKAGKWNDGALLLKDMVSR------- 292
Query: 292 EIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
EI ++ + + L + + + L KEM G +++ + + +A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 352 EKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
++ + F ++ Y + +++FR + +R A+ Y +++
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSY----------------------INLTNMYLN 449
C++ + +L E L +E V G+ P + +Y + + M L
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 450 LGMH--------------DRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
+ M+ D +L S + +PN Y + + L G++ +A +
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 496 HMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M D N + N ++ A+L GD + K+ + M
Sbjct: 533 KMEEDGN-APNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 126/288 (43%), Gaps = 17/288 (5%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P +F I+I + G LD A S++ M+++G Q L+N+L L S L
Sbjct: 415 PXTTSFSIVIDGLCNT---GKLDLALSLFRDMVRVGCKQ-NVLLYNNLIDKL-SNSNRLE 469
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE-G 331
+ YL + + SG + ++ + ++++ + +EM+ G E
Sbjct: 470 ECYL-----LLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALD--MVREMRVHGHEPWI 522
Query: 332 KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIF 390
K L V ++C ++ E +L + + +P A+ ++ + KI ++LEIF
Sbjct: 523 KHYTLLVKQLCKRKRSAEAC--NFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIF 580
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
R++ R V AY+ +I CK + ++ E V G+ P + +Y L + +
Sbjct: 581 RDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKN 640
Query: 451 GMHDRLHLAFSECLEKCR-PNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
G D+ S + K R PN Y ++ L NAG + A ++N M
Sbjct: 641 GDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEM 688
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 145/350 (41%), Gaps = 37/350 (10%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
M W + L + L Y RKF K +F++I +G V H+L + L+
Sbjct: 185 MCDSGWEPDKYTLTSVLQAYC-NSRKFDKALSVFNEIYGRGWVDG----HVLSILVLTFS 239
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
G +D+A + RM LG L+ F L+ G + + + +A +F + S
Sbjct: 240 KCGEVDKAFELIERMEDLG-----IRLNEKTFCVLIH--GFVRQSRVDKALQLFKKMQKS 292
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV- 348
G +Y LI + I+K + LL EM++ G + ++L ++ C++E D+
Sbjct: 293 GFAPDVSVYDALIGGLCAKKEIEKA-LHLL-SEMKELGIDPDIQILSKLIPYCSEEVDIY 350
Query: 349 -------EDAEKTWLRLLESD--NGIPTPAFVYKMEAY----AKIGE-FMKSLEIFR-EM 393
ED + + LL + NG+ V K AY A G+ + + E+ + M
Sbjct: 351 RLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDK--AYYLLXAMTGDNYTDNFEVNKFFM 408
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
+ + ++ +I+ LC + +L SL ++ V G K + Y NL + N
Sbjct: 409 VKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRL 468
Query: 454 DRLHLAFSECL-EKCRPNR----TIYGIYLESLKNAGNIEKAEEIFNHMH 498
+ +L E RP + +I+G G ++ E+ H H
Sbjct: 469 EECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGH 518
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 12/217 (5%)
Query: 228 APVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK-----PGGLSKYY----LQQ 278
A QG + C YN M + + + + L +V+ PG L +
Sbjct: 118 ASDQGGFNHNCYTYNAMASCLSHARQNAPLSLLSMDIVNSRCAMSPGALGAISKSGSIDL 177
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
E + SG E D Y+ L +Y ++ ++ + E+ G+ +G + + V
Sbjct: 178 VEMRLKEMCDSGWE--PDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSILV 235
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
L +K G+V+ A + R+ + + F + + + K+L++F++MQ+
Sbjct: 236 LTF-SKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGF 294
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ V Y +I LC +E E L+ E E G+ P
Sbjct: 295 APDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDP 331
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 147/361 (40%), Gaps = 58/361 (16%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRV-PSEMTFHILIVAYLSAPVQGCLDEACSIYN 242
T +A + + R A DI ++ +G + P++ T+ +I + G +DEA +++
Sbjct: 190 TVIAGFCSRGRVQAAL-DIMREMRERGGIAPNQYTYGTVISGWCKV---GRVDEAVKVFD 245
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
M+ G +P ++N+L G + L A ++ G+ + Y+ L+
Sbjct: 246 EMLTKGEVKPEAVMYNALIG------GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 299
Query: 303 WLHS-YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
H+ + D E L+ +EM GK + L V
Sbjct: 300 --HALFMDGRGTEAYELV-EEMG------GKGLALDV----------------------- 327
Query: 362 DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
F Y + + K G K+LEIF M R A+V Y +I L K + +
Sbjct: 328 --------FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQ 379
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGIY 477
T+ L E V G++P + Y L N + G DR E +EK R P+ Y
Sbjct: 380 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE-MEKKRIAPDDVTYNTL 438
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
+ L G +++A ++ + M + + I + + N ++S Y GD A +I + M K
Sbjct: 439 MRGLCLLGRVDEARKLIDEM-TKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 497
Query: 538 Y 538
+
Sbjct: 498 F 498
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 113/245 (46%), Gaps = 16/245 (6%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
++ +++ +G T++ILI + +G + +A I+ M + G + + SL
Sbjct: 313 ELVEEMGGKGLALDVFTYNILINGHCK---EGNVKKALEIFENMSRRG-VRATVVTYTSL 368
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
AL SK G +Q+ + +F + G+ +Y+ LI HS NID R +
Sbjct: 369 IYAL-SKKG-----QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID--RAFEIM 420
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
EM++ +++R G V++A K + + GI Y + Y+
Sbjct: 421 GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM--TKRGIQPDLVTYNTLISGYS 478
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
G+ +L I EM + + ++ Y+ +I+ LCK + + E+++KE VE G+ P
Sbjct: 479 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 538
Query: 439 SYINL 443
+YI+L
Sbjct: 539 TYISL 543
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 127/300 (42%), Gaps = 18/300 (6%)
Query: 202 IFDDIINQGRV-PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
+FD+++ +G V P + ++ LI Y QG LD A +RM++ G + +N L
Sbjct: 243 VFDEMLTKGEVKPEAVMYNALIGGYCD---QGKLDTALLYRDRMVERG-VAMTVATYNLL 298
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
AL G Y L + GL + Y+ LI H + N+ K+ + + +
Sbjct: 299 VHALFMDGRGTEAYEL------VEEMGGKGLALDVFTYNILINGHCKEGNV-KKALEIFE 351
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
M + G S++ +K+G V++ +K + + GI +Y + +++
Sbjct: 352 N-MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR--RGIRPDLVLYNALINSHS 408
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
G ++ EI EM+++ + Y+ ++ LC + L+ E + G++P +
Sbjct: 409 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLV 468
Query: 439 SYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+Y L + Y G + D L + + P Y ++ L G + AE + M
Sbjct: 469 TYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 528
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 7/203 (3%)
Query: 357 RLLESDNGIPTP-AFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVP-AYHKIIELL 412
R LE +P P A Y + + G +L+I REM+ER G A Y +I
Sbjct: 172 RALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 231
Query: 413 CKAEETELTESLMKEFVETG-MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPN 470
CK + + E + G +KP Y L Y + G D L +E+
Sbjct: 232 CKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMT 291
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
Y + + +L G +A E+ M + + ++ + NI+++ + G+ KA +I+
Sbjct: 292 VATYNLLVHALFMDGRGTEAYELVEEM-GGKGLALDVFTYNILINGHCKEGNVKKALEIF 350
Query: 531 DLMCLKKYEIESAWMEKLDYVLS 553
+ M + L Y LS
Sbjct: 351 ENMSRRGVRATVVTYTSLIYALS 373
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 163/371 (43%), Gaps = 55/371 (14%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D ++ +G P +T+ +++ +G D A ++ N+M Q G +P ++N++
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCK---RGDTDLAFNLLNKMEQ-GKLEPGVLIYNTII 263
Query: 262 RALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLI-WLHSYQDNIDKERISLL 319
GL KY ++ A +F + T G+ YS LI L +Y D R L
Sbjct: 264 -------DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR---L 313
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES--DNGIPTPAFVY----- 372
+M + +++ KEG + +AEK + +++ D I T + +
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 373 --KMEAYAKIGEFMKS--------------------------LEIFREMQERLGSASVPA 404
+++ ++ EFM S +E+FREM +R +
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
Y+ +I+ L +A + ++ + + KE V G+ P + +Y L + G ++ + F E L
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF-EYL 492
Query: 465 EKCRPNRTI--YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
++ + TI Y I +E + AG +E ++F ++ S + + + + N ++S + G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGS 551
Query: 523 FVKAEKIYDLM 533
+A+ ++ M
Sbjct: 552 KEEADALFKEM 562
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 53/330 (16%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D+I + P TF LI A++ +G L EA +Y+ M++ P ++SL
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVK---EGKLVEAEKLYDEMVKRS-IDPSIVTYSSLI 368
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
F H+ L K ++ ++ H + D + +L+K
Sbjct: 369 NG-----------------FCMHDRLDEA----KQMFEFMVSKHCFPDVVTYN--TLIKG 405
Query: 322 EMQQAGFEEGKEVLLS---------------VLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
+ EEG EV +++ + GD + A++ + ++ +G+P
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS--DGVP 463
Query: 367 TPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
Y ++ K G+ K++ +F +Q ++ Y+ +IE +CKA + E L
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKN 483
G+KP + +Y + + + G + F E E PN Y + +
Sbjct: 524 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLR 583
Query: 484 AGNIEKAEEIFNHMHS------DQTIGVNT 507
G+ E + E+ M S TIG+ T
Sbjct: 584 DGDREASAELIKEMRSCGFAGDASTIGLVT 613
>gi|255654050|gb|ACU25391.1| hypothetical protein [Trebouxia showmanii]
Length = 207
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 46/177 (25%)
Query: 567 LSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEWLH--P 624
L+ Q+E L G++LG +E+ R + ++F E S H +LY+ + ++ P
Sbjct: 7 LTLLQKEVLFGVILGDAHLETQNNRITYRVKF---EQSIKHKPYIEHLYEIFKNYVKTPP 63
Query: 625 SFK------------------------------FWPKGRLVIPKLIHRWLTPRALAYWFM 654
K F+ + + VIPKLIHRWLTPRALAYW+M
Sbjct: 64 QLKLVKYKNNQTISTNIRFATISSSTFTFFGKQFYKEKKKVIPKLIHRWLTPRALAYWYM 123
Query: 655 YGGHRTSVGD--ILLKLKVSSEGIALVFKTLKARSLDCRVKKKGRVFWIGFLGSNST 709
G S +LL + S + C V + +F +G + +T
Sbjct: 124 DDGSMKSTQSKAVLLNTQGFSHDQVCIL---------CNVLTQNLIFLVGLVNKKNT 171
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 137/320 (42%), Gaps = 34/320 (10%)
Query: 233 CLDEACSIYNRMIQLGGYQPRPSL--HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
CLD+A S++ +M++ +P PS+ + L +A+V K+Y +S
Sbjct: 52 CLDDAFSLFRQMVRT---KPLPSVASFSKLLKAMVHM-----KHY------------SSV 91
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKK-----EMQQAGFEEG---KEVLLSVL-RV 341
+ + ++I+ I +H + +I L+ + + F++G EV + L R
Sbjct: 92 VSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRG 151
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
E V+DA + +L+ + P + M K G K+ ++ R M++
Sbjct: 152 LFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKP 211
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
+ Y +I+ CK + SL+ E + + P + +Y L + L + + F
Sbjct: 212 NTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLF 271
Query: 461 SECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
E + PN + ++ L G +E AEEI +M ++ + + + N+I+ Y
Sbjct: 272 LEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYM-IEKGVDPDVITYNMIIDGYGL 330
Query: 520 SGDFVKAEKIYDLMCLKKYE 539
G +A +I+D M K E
Sbjct: 331 RGQVDRAREIFDSMINKSIE 350
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 108/246 (43%), Gaps = 18/246 (7%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ D G + + R+IFD +IN+ P ++++ILI Y Q +DEA + R I
Sbjct: 324 IIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYAR---QKKIDEAMQVC-REI 379
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
G +P N L L G +K A+ F +L++G D+Y+ L
Sbjct: 380 SQKGLKPSIVTCNVLLHGLFEL--GRTK----SAQNFFDEMLSAGH--IPDLYTHCTLLG 431
Query: 306 SY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
Y ++ + +E +S K +++ + ++ +V+ K G ++ A T+ +L
Sbjct: 432 GYFKNGLVEEAMSHFHK-LERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLH 490
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
+ + Y + G ++ ++ R+M++ A Y+ I+ ++ + S
Sbjct: 491 PDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKV----SE 546
Query: 425 MKEFVE 430
MK F+E
Sbjct: 547 MKAFLE 552
>gi|224088774|ref|XP_002308534.1| predicted protein [Populus trichocarpa]
gi|222854510|gb|EEE92057.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 150/364 (41%), Gaps = 35/364 (9%)
Query: 200 RDIFDDIINQGRV-PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQ----------LG 248
+ FD I+N V P T+ +I + G +D A +++ MI +
Sbjct: 184 KSFFDQIVNDAVVKPDASTYTTMIRGFCKV---GMIDNARKVFDEMICEPNLITCNTLIN 240
Query: 249 GYQPRPSLHNS---LFRALVSKP-------------GGLSKYYLQQAEFIFHNLLTSGLE 292
GY + + N+ L R + SK G K L +A +L G
Sbjct: 241 GYCKKGDMENARIFLCRMMESKDCLPDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCN 300
Query: 293 IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
Y+ +I+ + N+D+ R L K M+ G +E LS+L+ + G E+A
Sbjct: 301 PNLWTYNAIIYGLCLRGNVDEARRLLTK--MRLNGVKENVATHLSILKGLSVAGKSEEAI 358
Query: 353 KTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+ ++ + + AY K+ + +++ + +EMQ + S SV +++ ++ +L
Sbjct: 359 GYFSEMIRKGMKLDAKEHEVVITAYCKMRKPDEAISLLKEMQAKGISRSVGSFNAVLRIL 418
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYIN-LTNMYLNLG-MHDRLHLAFSECLEKCRPN 470
+ E + L+K+ G P + SY + + + G M + L + +
Sbjct: 419 VEIGELDKAVLLLKQVKNMGCLPNLVSYSTVICGLCRSHGRMQEVAGLVDDMLQDGFEMD 478
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
T+Y + AGN E A F + ++ +N +S + ++ G ++AE+I+
Sbjct: 479 ATLYSCLVGGFCEAGNEEMAMRAF-YDSINKNYVINLQSFSFFVNLMCGKGKVIEAEQIF 537
Query: 531 DLMC 534
MC
Sbjct: 538 KDMC 541
>gi|255654055|gb|ACU25395.1| hypothetical protein [Trebouxia suecica]
Length = 208
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 40/191 (20%)
Query: 571 QRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEWLH--PSFK- 627
Q+E L G++LG +E+ R + ++F E S H +LYD + ++ P K
Sbjct: 11 QKEVLFGVILGDAHLETQNNRITYRVKF---EQSIKHKAYIEHLYDVFKNYVKTSPQLKL 67
Query: 628 -----------------------------FWPKGRLVIPKLIHRWLTPRALAYWFMYGGH 658
F+ + V PKLIHRWLTPRALAYW+M G
Sbjct: 68 VTYKNNQTKSTNIRFATISSSTFTFFGKQFYKDKKKVTPKLIHRWLTPRALAYWYMDDGS 127
Query: 659 RTSV---GDILLKLKVSSEGIALVFKTLKAR-SLDC-RVKKKGRVFWIGFLGSNSTLFWK 713
S G +L S + L+ L + +L C K+K + I G
Sbjct: 128 MKSYQSKGVLLNTQAFSHAEVQLLCNVLTEKFNLYCWPRKQKKNTYQIYISGKTYETLRN 187
Query: 714 LIEPYVLDELK 724
I P+++ +++
Sbjct: 188 CIYPFIIPDMQ 198
>gi|302801049|ref|XP_002982281.1| hypothetical protein SELMODRAFT_116350 [Selaginella moellendorffii]
gi|300149873|gb|EFJ16526.1| hypothetical protein SELMODRAFT_116350 [Selaginella moellendorffii]
Length = 515
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 76/381 (19%), Positives = 158/381 (41%), Gaps = 24/381 (6%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
C+ + E G ++ ++ + D +AT L + K + R +FD ++ + V
Sbjct: 113 CVNAADLENGRTIHRRIVDS-GFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVV- 170
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK 273
+++ +I AY VQG E +QL G +P + SL A S P L
Sbjct: 171 ---SWNNMIAAY----VQGRDGEGAISLCWAMQLEGMRPDKATFASLLNA-CSDPNRLVD 222
Query: 274 YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKE 333
+E IF N+ ++ + +D++ + +Y+ + + + L ++M E +
Sbjct: 223 GRQIHSE-IFDNIFSNSQQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRV 281
Query: 334 VLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFR 391
+SVL CA D+ + R++ G+ T V + Y K G F ++ +F
Sbjct: 282 TFISVLNACAHLSDLRQGQAIHARVMR--RGLATDVAVANSIVFMYGKCGSFDEASIVFE 339
Query: 392 EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
+ + + + + +I + E + + + G++ +++ + + ++G
Sbjct: 340 KTKHK----DISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVG 395
Query: 452 MHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC 510
+ + F+ E PN Y ++ L AG++ AEE + M + NT
Sbjct: 396 LIEEGCEFFASMAELGIEPNMEHYSCLVDLLARAGHLHTAEEFLSRM----PVAANTIVL 451
Query: 511 NIILSAYLSSGDFVKAEKIYD 531
+L+A GD +A ++ +
Sbjct: 452 TALLAACRVHGDVERARRVAE 472
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 39/247 (15%)
Query: 299 SGLIW---LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
S ++W + +YQ+ E + L + EMQ G + ++VL C D+E+
Sbjct: 68 SRILWNSMITAYQERDPHEALHLFR-EMQPEGVSPDRITFMTVLNACVNAADLENGRTIH 126
Query: 356 LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
R+++S YAK G ++ +F M R V +++ +I +
Sbjct: 127 RRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFR----DVVSWNNMIAAYVQG 182
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYG 475
+ E SL GM+P ++ +L N A S+ PNR + G
Sbjct: 183 RDGEGAISLCWAMQLEGMRPDKATFASLLN-------------ACSD------PNRLVDG 223
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSD-QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
+ S EIF+++ S+ Q + +++AY G++ KA ++Y+ M
Sbjct: 224 RQIHS-----------EIFDNIFSNSQQHHRDLFLWTSMITAYEQHGEYRKALELYEQMH 272
Query: 535 LKKYEIE 541
++ E +
Sbjct: 273 SRQVEAD 279
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 137/328 (41%), Gaps = 19/328 (5%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M +R D L + + + +I D ++ +G P T++ LI
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKL-- 364
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G ++EA I N+MI L + P +N+L L + +++A + L + G
Sbjct: 365 -GEVEEAVEILNQMI-LRDFSPNTVTYNTLISTLCKE------NQVEEATELARVLTSKG 416
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISL-LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
+ ++ LI +N R+++ L +EM+ G + ++ G +E
Sbjct: 417 ILPDVCTFNSLIQGLCLTNN---HRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLE 473
Query: 350 DAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
+A + L+ +ES +G Y ++ + K ++ EIF EM+ + S +V Y+
Sbjct: 474 EA-LSLLKEMES-SGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNT 531
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEK 466
+I+ LCK E LM + + G+KP +Y +L + G + + +
Sbjct: 532 LIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNG 591
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
C P+ YG + L AG +E A +
Sbjct: 592 CEPDSVTYGTLILGLSKAGRVELASRLL 619
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 90/444 (20%), Positives = 167/444 (37%), Gaps = 67/444 (15%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R + ++ + +W +Q + + ++ +GK+ F R + ++ + G
Sbjct: 81 RQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRR 140
Query: 216 MTFHILIVAY--------------------------------LSAPVQGCLDEACSIYNR 243
TF ILI +Y L+ V G + I N
Sbjct: 141 GTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNS 200
Query: 244 MIQLGGYQPRPSLHNSLFRALVS----KPGGL-----SKYYLQQAEFIFHNL-------- 286
+ G +P + N L +AL +P L Y L E F L
Sbjct: 201 RMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEG 260
Query: 287 -LTSGLEIQKDIYSG---------LIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
+ L I++ + + + +H Y E + EM GF +
Sbjct: 261 NMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFN 320
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA--KIGEFMKSLEIFREMQ 394
S++ + G V+ A + +L+ G F Y + K+GE +++EI +M
Sbjct: 321 SLVNGLCRIGHVKHALEILDVMLQE--GFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMI 378
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
R S + Y+ +I LCK + E L + G+ P + ++ +L L L +
Sbjct: 379 LRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ-GLCLTNNH 437
Query: 455 RLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI 512
RL + E ++ C P+ Y + ++SL + G +E+A + M S N + N
Sbjct: 438 RLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGC-SRNVVTYNT 496
Query: 513 ILSAYLSSGDFVKAEKIYDLMCLK 536
++ + + +AE+I+D M L+
Sbjct: 497 LIDGFCKNKRIEEAEEIFDEMELQ 520
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 142/374 (37%), Gaps = 63/374 (16%)
Query: 206 IINQGRVPSEMTFHILIVAYLSA----PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
++++G P TF+ILI A A P ++E S G P +L
Sbjct: 202 MVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSY--------GLSPDEKTFTTLM 253
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
+ + + G ++ + + + +S + + + +H Y E +
Sbjct: 254 QGFIEE-GNMNGALRIREQMVAAGCPSSNVTVN-------VLVHGYCKEGRIEEVLSFID 305
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA--K 379
EM GF + S++ + G V+ A + +L+ G F Y + K
Sbjct: 306 EMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQE--GFDPDIFTYNSLIFGLCK 363
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
+GE +++EI +M R S + Y+ +I LCK + E L + G+ P + +
Sbjct: 364 LGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 423
Query: 440 YINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGN----------- 486
+ +L L L + RL + E ++ C P+ Y + ++SL + G
Sbjct: 424 FNSLIQ-GLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEM 482
Query: 487 ------------------------IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
IE+AEEIF+ M Q I N + N ++ +
Sbjct: 483 ESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMEL-QGISRNVVTYNTLIDGLCKNRR 541
Query: 523 FVKAEKIYDLMCLK 536
+A ++ D M ++
Sbjct: 542 VEEAAQLMDQMLME 555
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 156/372 (41%), Gaps = 59/372 (15%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
V EW++++ ++ D L D G++ ++ + ++ ++ VP+E T+ +LI AY
Sbjct: 163 VCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 222
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRP-----SLHNSLFRALVSKPGGLSKYYLQQAE 280
A G ++ A + ++++ + P +++N+ L+ + G ++A
Sbjct: 223 CMA---GLIERAEVV---LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNT-----EEAI 271
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL-LKKEMQQAGFEEGKEVLLSVL 339
+F + + + Y+ +I L+ K +S L EM+ + +++
Sbjct: 272 DVFQRMKRDRCKPTTETYNLMINLYG---KASKSYMSWKLYCEMRSHQCKPNICTYTALV 328
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERL 397
A+EG E AE+ + +L E +G+ +VY ME+Y++ G + EIF MQ
Sbjct: 329 NAFAREGLCEKAEEIFEQLQE--DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMG 386
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
+Y+ +++ +A E++ +E G+ P M S++ L + Y
Sbjct: 387 CEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAY---------- 436
Query: 458 LAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
A ++ K E I M S+ + +T N +L+ Y
Sbjct: 437 ------------------------SKARDVTKCEAIVKEM-SENGVEPDTFVLNSMLNLY 471
Query: 518 LSSGDFVKAEKI 529
G F K EKI
Sbjct: 472 GRLGQFTKMEKI 483
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 127/300 (42%), Gaps = 29/300 (9%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ T+ L+ A+ +G ++A I+ ++ Q G +P ++N+L + S+ G
Sbjct: 319 PNICTYTALVNAFAR---EGLCEKAEEIFEQL-QEDGLEPDVYVYNALMESY-SRAG--- 370
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYS------GLIWLHSYQDNIDKERISLLKKEMQQA 326
Y A IF + G E + Y+ G LHS D E + +EM++
Sbjct: 371 --YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS-----DAEAVF---EEMKRL 420
Query: 327 GFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFM 384
G + + +L +K DV E + S+NG+ FV + Y ++G+F
Sbjct: 421 GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM--SENGVEPDTFVLNSMLNLYGRLGQFT 478
Query: 385 KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT 444
K +I EM+ +A + Y+ +I + KA E E L E E +P + ++ +
Sbjct: 479 KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRI 538
Query: 445 NMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
Y ++ + F E ++ C P+ + L + + +E+ + MH T+
Sbjct: 539 GAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTV 598
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 114/279 (40%), Gaps = 12/279 (4%)
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
F L+ G K+ ++AE ++ LL S +D Y+ LI + I++ + L+
Sbjct: 180 FNLLIDAYG--QKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLV- 236
Query: 321 KEMQQAGFEEGKEVLLSVLR-----VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME 375
EMQ K + ++V + ++G+ E+A + R+ T + +
Sbjct: 237 -EMQNHHVSP-KTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 294
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
Y K + S +++ EM+ ++ Y ++ + E E + ++ E G++P
Sbjct: 295 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 354
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ Y L Y G FS C P+R Y I +++ AG AE +F
Sbjct: 355 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 414
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M I +S ++LSAY + D K E I M
Sbjct: 415 EEMKR-LGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 452
>gi|356573733|ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Glycine max]
Length = 752
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 157/376 (41%), Gaps = 15/376 (3%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
T++A + + + ++ W +Q WY L D + ++R F + +FD+++
Sbjct: 90 THIAQALKVVGDVDACLSLFRWAKRQAWYVPSDDCYVMLFDGLNQKRDFEGIQLLFDEMV 149
Query: 208 -NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVS 266
+ S ++ YL+ + L+ + + +++ G + +NSL ++
Sbjct: 150 GDSADGVSLFAACNRVIRYLAKAEK--LEVSFCCFKKILN-AGCKVDTETYNSLITLFLN 206
Query: 267 KPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQA 326
K GL +A ++ ++ +G + Y +I + +D L +EM+
Sbjct: 207 K--GLP----YKAFEMYESMEKAGCSLDGSTYELMIPNLAKSGRLDAA--FKLFQEMKVR 258
Query: 327 GFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKS 386
GF G V S++ K G ++ A K ++ + P +V +E+Y K G+ +
Sbjct: 259 GFRPGLNVFASLVDSMGKAGRLDSAMKVYMEMRGYGYKPPPTIYVSLIESYVKSGKLETA 318
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNM 446
L ++ EM+ + Y IIE K+ + E+ S + + G P +Y L M
Sbjct: 319 LRLWDEMRMAGFRPNFGLYTLIIESHAKSGKLEIAMSTFLDMEKAGFLPTPSTYACLLEM 378
Query: 447 YLNLGMHD-RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV 505
+ G D + L S RP + Y + L L N ++ A +I M + V
Sbjct: 379 HAASGQIDPAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA-MGYSV 437
Query: 506 NTRSCNIILSAYLSSG 521
+ + +I++ Y+ G
Sbjct: 438 DVTASDILM-VYIKEG 452
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 149/366 (40%), Gaps = 16/366 (4%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D L DY+ K + + R +FD + +G P T+ L+ Y + +G L E
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT---KGALVEMH 359
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
+ + M++ G P ++ +F L+ K + QA +F + GL Y
Sbjct: 360 GLLDLMVR-NGIHP----NHYVFSILICAYAKQGK--VDQAMLVFSKMRQQGLNPDTVTY 412
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+I + ++ ++M G V S++ + A++ L +
Sbjct: 413 GTVIGILCKSGRVEDAMRYF--EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELLCKAEE 417
L+ + T F ++++ K G ++S ++F ++ R+G + Y +I+ C A +
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPDIITYSTLIDGYCLAGK 529
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGI 476
+ L+ V GMKP +Y L N Y + M D L L P+ Y I
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589
Query: 477 YLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
L+ L A+E++ + T + + NIIL + +A +++ +CL
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGT-QLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 648
Query: 537 KYEIES 542
++E+
Sbjct: 649 DLQLET 654
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 137/348 (39%), Gaps = 35/348 (10%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN- 258
R +FD+++ +GR S + L+ + A S YNRM + G + P+L
Sbjct: 39 RHVFDELLRRGRGASIYGLN----CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
+ G L + I + + + GL D +D +
Sbjct: 95 GILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTP-MLKGLCADKRTSDAMD-----I 148
Query: 319 LKKEMQQAGFEEGK---EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVY 372
+ + M Q G +LL L C E E L+++ D G P ++
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGL--CDDNRSQEALE--LLQMMPDDGGDCPPDVVSYTT 204
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
+ + K G+ K+ + EM +R +V Y II LCKA+ + ++ V+ G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264
Query: 433 MKPLMPSYINLTNMYLN-------LGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAG 485
+ P +Y ++ + Y + +G ++H S+ +E P+ Y ++ L G
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH---SDGVE---PDVVTYNSLMDYLCKNG 318
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+A ++F+ M + + + + +L Y + G V+ + DLM
Sbjct: 319 RCTEARKMFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 152/353 (43%), Gaps = 32/353 (9%)
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH--NSLFRALVSKPGGLSKYY 275
++ LI AY + G + A +I++ MI+ G P P++ N + RAL+ G L + Y
Sbjct: 785 WNALIHAYAES---GLYEHARAIFDIMIKKG---PLPTVESVNGMMRALIVD-GRLDELY 837
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+ E L+I+ + L+ L ++ D + + M+ AG+ +
Sbjct: 838 VVVQEL-------QDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLY 890
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK---MEAYAKIGEFMKSLEIFRE 392
++ + D E L + E + P V + Y G F +++E++
Sbjct: 891 RIMISLLCHNKRFRDVE---LMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHS 947
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
+ E Y+ +I + + E +L+ E + G+ P + SY L +
Sbjct: 948 ILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKL 1007
Query: 453 HDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
++ L F E K R NR+IY + ++ +NA N KAE + + M D I + +
Sbjct: 1008 WEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKED-GIEPTIATMH 1066
Query: 512 IILSAYLSSGDFVKAEKIYDLMCLKKYEIES--------AWMEKLDYVLSLNR 556
I++++Y +SG +AEK+ + + EI + A++ DY L + +
Sbjct: 1067 ILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITK 1119
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 150/376 (39%), Gaps = 22/376 (5%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
M+++ + D L L Y+ + F + +F D+ G VPS+ F I
Sbjct: 667 MLKRGSFGQDCDLYEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKVFPSFIF------ 720
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYL-QQAEFIFHNLLT 288
Q C QL R + ++ V+ K L QQAE L
Sbjct: 721 -QCC---RLGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQ 776
Query: 289 -SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGD 347
SG + + I++ LI H+Y ++ E + M + G E + ++R +G
Sbjct: 777 ESG--VDRRIWNALI--HAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGR 832
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
+++ L + D I + +EA+AK G+ + ++I+ M+ ++ Y
Sbjct: 833 LDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRI 892
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK- 466
+I LLC + E ++ E G KP + L MY G DR + LE
Sbjct: 893 MISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAG 952
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTR--SCNIILSAYLSSGDFV 524
P+ Y + + + N + EE F ++ G+ + S I+L+A + +
Sbjct: 953 LEPDEDTYNTLI--VMYSRNF-RPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWE 1009
Query: 525 KAEKIYDLMCLKKYEI 540
+A+ +++ M K Y +
Sbjct: 1010 QADLLFEEMRTKGYRL 1025
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 166/399 (41%), Gaps = 36/399 (9%)
Query: 128 GGTLVRILN-AQKKWLRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALAT 184
G + +L+ ++ LR + TY L C + + V+E M+ R D
Sbjct: 274 AGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASEC-RPDLWTYN 332
Query: 185 KLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM 244
+ G+ K + +F +++ +G P +T++ L+ A+ +G ++ + +
Sbjct: 333 AMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAK---EGDVERVERVCEEL 389
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
++ G++ +N++ + K G L A ++ + G Y+ L+
Sbjct: 390 VK-AGFRKDGITYNTMIH-MYGKMG-----RLDLALGLYDEMRAIGCTPDAVTYTVLV-- 440
Query: 305 HSYQDNIDK-ERISLLKK---EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
D++ K +RIS K EM AG + +++ AK G +DAE+T+ R++E
Sbjct: 441 ----DSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVE 496
Query: 361 SDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
S A++ ++ +A+ E K + ++R M + Y ++ L K E +
Sbjct: 497 SGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDE 556
Query: 421 TESLMKEFVET-GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLE 479
E ++++ M PL+ S I + ++ G L CL+ P+ L+
Sbjct: 557 IEGVIQDMEAVFEMNPLVISSILIKAECISQGA----SLLKRACLQGYEPDGKSLLSILD 612
Query: 480 SLKNAGNIEKA----EEIFNHMHSDQTIGVNTRSCNIIL 514
+ + G EK E I H+ + + C+I+L
Sbjct: 613 AYEKMGKHEKGLSLLEWIRQHVPNSHNL---ISECSIML 648
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 112/275 (40%), Gaps = 21/275 (7%)
Query: 164 FRVYEWM---MQQHWYRFDFA-LATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFH 219
FR E M M+ ++ D L T L Y G F + +++ I+ G P E T++
Sbjct: 903 FRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTG-NFDRTIEVYHSILEAGLEPDEDTYN 961
Query: 220 ILIVAYLSA--PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
LIV Y P +G + + ++G P L + ++ L++ G + +
Sbjct: 962 TLIVMYSRNFRPEEG--------FTLLYEMGKRGLTPKLES--YKILLAASGKAKLW--E 1009
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
QA+ +F + T G + + IY + + Y++ + + L M++ G E +
Sbjct: 1010 QADLLFEEMRTKGYRLNRSIYH--MMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHI 1067
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
++ G ++AEK L S+ I T + ++AY + ++ + EM+
Sbjct: 1068 LMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDG 1127
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
+ I E+T+ L+K + G
Sbjct: 1128 VEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCG 1162
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 127/307 (41%), Gaps = 37/307 (12%)
Query: 164 FRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIV 223
F+ + M+ Y D T L D + K R F + FD + QG +P+ T++ LI
Sbjct: 351 FKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLIC 410
Query: 224 AYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY-------- 275
L A G +++A + + M +G QP + + F K G K
Sbjct: 411 GLLRA---GRIEDALKLLDTMESVG-VQPTAYTYIT-FIDYFGKSGETGKAVETFEKMKA 465
Query: 276 ----------------------LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
L++A+ +F+ L +GL Y+ ++ +S +D
Sbjct: 466 KGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVD- 524
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
E ++LL EM + G E V+ S++ K G V++A + + R+ + +
Sbjct: 525 EAVNLLS-EMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTL 583
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ K G K++E+F M + S + +++ +++ CK +E EL + +
Sbjct: 584 LSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDC 643
Query: 434 KPLMPSY 440
KP + +Y
Sbjct: 644 KPDVLTY 650
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 118/305 (38%), Gaps = 46/305 (15%)
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
++G L + ++ N+M + G+ +N L L+ + +A ++ +++
Sbjct: 169 IRGGLRQMTTVLNKM-RKAGFVLNAYSYNGLIHLLIQSG------FCGEALEVYRRMVSE 221
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
GL+ YS L+ + D E + +L KEM+ G +RV + G ++
Sbjct: 222 GLKPSLKTYSALMV--ALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKID 279
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
EAY EIFR M + + Y +I
Sbjct: 280 -------------------------EAY----------EIFRRMDDEGCGPDLVTYTVLI 304
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCR 468
+ LC A + E + L + G KP YI L + + + G D +S+ +
Sbjct: 305 DALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYM 364
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
P+ + I ++ L A + ++A F+ M Q I N + N ++ L +G A K
Sbjct: 365 PDVVTFTILVDVLCKARDFDEAFATFDVMRK-QGILPNLHTYNTLICGLLRAGRIEDALK 423
Query: 529 IYDLM 533
+ D M
Sbjct: 424 LLDTM 428
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 124/314 (39%), Gaps = 39/314 (12%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
D+F D+ N G P TF++L+ + + G + E +Y MI +P +N +
Sbjct: 809 DLFKDMKNVGCAPDAFTFNMLLAVHGKS---GKITELFELYKEMIS-RRCKPDAITYNIV 864
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK----ERI 316
+L L +A F++L++S Y LI D + K E
Sbjct: 865 ISSLAKSNN------LDKALDFFYDLVSSDFRPTPRTYGPLI------DGLAKVGRLEEA 912
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEA 376
L +EM G + + ++ K GD E A + + R++ ++ ++
Sbjct: 913 MRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDC 972
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
G ++L F E++ AY++II L K++ E +L E G+ P
Sbjct: 973 LCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPD 1032
Query: 437 MPSYINLTNMYLNLG----------MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGN 486
+ +Y ++ LNLG M++ L LA E P+ Y + + N
Sbjct: 1033 LYTY---NSLMLNLGLAGMVEQAKRMYEELQLAGLE------PDVFTYNALIRGYSLSEN 1083
Query: 487 IEKAEEIFNHMHSD 500
E A ++ +M D
Sbjct: 1084 PEHAYTVYKNMMVD 1097
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 110/265 (41%), Gaps = 11/265 (4%)
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
A I+++ + G P + +N L L L +Y ++A +F ++ G
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGEL------LEVHYTEKAWDLFKDMKNVGCAPDAF 824
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
++ L+ +H I + + L KEM + V+ AK +++ A +
Sbjct: 825 TFNMLLAVHGKSGKITE--LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFY 882
Query: 357 RLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
L+ SD PTP + ++ AK+G +++ +F EM + + ++ +I K
Sbjct: 883 DLVSSDFR-PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIY 474
+TE L K V G++P + SY L + G D F+E P+ Y
Sbjct: 942 GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHS 499
+ L + +E+A ++N M +
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRN 1026
>gi|242057909|ref|XP_002458100.1| hypothetical protein SORBIDRAFT_03g026930 [Sorghum bicolor]
gi|241930075|gb|EES03220.1| hypothetical protein SORBIDRAFT_03g026930 [Sorghum bicolor]
Length = 666
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 151/354 (42%), Gaps = 35/354 (9%)
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL 271
+PS T+ IL S G LD+A + + M++ G P ++ + V+ G
Sbjct: 204 LPSPTTYRILA---RSLAENGKLDQALELKDGMLERGLIAPDTQVYAFIMGGFVNAGDG- 259
Query: 272 SKYYLQQAEFIFHNLLT--SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
+A ++ L G I + G + + ++KE + + +
Sbjct: 260 -----DKAVSLYEELKEKLGGEPILDGVVYGNLMKGYFLKGMEKEAMDCYAEVLG----- 309
Query: 330 EGKEVLLS------VLRVCAKEGDVEDAEKTWLRL-LESDN----GIPTPAFVYKMEAYA 378
EG +V VL + G +EDA K + R+ +E D + +F ++AY
Sbjct: 310 EGSKVRFGATSYNMVLDALGRNGRLEDALKLFDRMCVEHDPPRTIAVNLGSFNVMVDAYC 369
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
+ F ++E+F +M E+ + +Y+ +I+ L K E E L KE E G+KP
Sbjct: 370 RAERFQDAIEVFGKMAEKRCAPDALSYNNLIDWLGKNELVGEAEGLYKEMGERGVKPDEY 429
Query: 439 SYINLTNMYLNLGMHDRLHLA---FSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+Y+ L + DR+ A F++ L+ RPN + + L + +A+ F
Sbjct: 430 TYVLLIESCFKV---DRVEDAVSYFNKMLDAGLRPNANAFNKVIGGLVKVDRLSEAQGFF 486
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL 548
+ M ++ + N S ++L AY+++ A KI + L + + S M+ L
Sbjct: 487 D-MMPEKEVKPNIASYELLLKAYVAAARLDDAIKIAKGILLDESVVFSDEMKTL 539
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 145/376 (38%), Gaps = 51/376 (13%)
Query: 156 RIRENETGFRVYEWMMQQHWY-RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
R+ + E G + ++W + + D + L + R F + + +++ Q P+
Sbjct: 70 RVHDAELGLKFFDWASTRPFSCSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPT 129
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY 274
F LI+AY + G LD A +++ + ++ P N L LV G
Sbjct: 130 REAFSALILAYAES---GSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKS--GKVDV 184
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG-FEEGKE 333
LQ ++ +L Q D +G + +D S++ K + G EEG+
Sbjct: 185 ALQ----LYDKML------QTDDGTGAV--------VDNYTTSIMVKGLCNLGKIEEGRR 226
Query: 334 VLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFR 391
++ + W + +P F Y M + Y K G+ +
Sbjct: 227 LI----------------KHRWGKCC-----VPHVVF-YNMIIDGYCKKGDLQCATRALN 264
Query: 392 EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
E++ + +V Y +I CKA E E + L+ E G+ + + N+ + G
Sbjct: 265 ELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYG 324
Query: 452 MHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC 510
+ E C P+ T Y I + G IE+A+E+ ++ + N S
Sbjct: 325 LVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKA-KERGLLPNKFSY 383
Query: 511 NIILSAYLSSGDFVKA 526
++ AY GD+VKA
Sbjct: 384 TPLMHAYCKKGDYVKA 399
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 12/259 (4%)
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
V G +D A + +M++ G + P ++N L L K G + L +E + N
Sbjct: 427 VAGEIDVALMVREKMMEKGVF-PDAQIYNILMSGLCKK-GRIPAMKLLLSEMLDRN---- 480
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
+Q D+Y + + N + + + K + + G + G ++++ K G +
Sbjct: 481 ---VQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMT 537
Query: 350 DAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
DA + L + S + P + ++ Y K + +L++F +M + +V Y +
Sbjct: 538 DA-LSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSL 596
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKC 467
I CK + E + + P + +Y L + G +R F L C
Sbjct: 597 INGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGC 656
Query: 468 RPNRTIYGIYLESLKNAGN 486
PN + + L N
Sbjct: 657 LPNDATFHYLINGLTNTAT 675
>gi|357487221|ref|XP_003613898.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515233|gb|AES96856.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 807
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 151/386 (39%), Gaps = 55/386 (14%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D GK + +IF +I QG P+ +TF+ +I Y + G + E + RM
Sbjct: 277 LIDIYGKAGQIQAVYEIFAKMIKQGVAPTTVTFNTMIHLYGN---HGRIREVSLLLQRME 333
Query: 246 QLGGYQPRPSLHNSLFRALVSKPG-GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
+L P +N L LV L+ YL + + F ++ D+ S L
Sbjct: 334 ELRC-PPDTRTYNILISVLVKHNNIKLAAKYLMKMKEAF---------LEPDLVSYRTLL 383
Query: 305 HSYQDNIDKERISLLKKEMQQAGF--EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
++Y + L +EM + G +E + L+ + V E ++ + W R
Sbjct: 384 YAYSTRKMVQEAEELVREMDERGLKIDEFTQAALTRMYV---ESNMLEQSWLWFRRFHVA 440
Query: 363 NGIPTPAFVYKMEAYAKIG-------EFM---------------------------KSLE 388
I + + ++AY + G FM K+ +
Sbjct: 441 GNITSSCYCANIDAYGEQGYTLEAEKVFMCCKQKKKLSVLVFNVMIKAYGIGKCYDKACQ 500
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+F M++ A+ +Y +I +L A++ + + + + E G+ Y + + ++
Sbjct: 501 LFDSMEKFGIVANECSYSSLIHILASADKPHIAKPYLNKMQEAGLVSDCILYCAVISSFV 560
Query: 449 NLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
L D + E + +P+ IY + + + + GN+ KA + M + +G N
Sbjct: 561 KLSQLDMAEELYIEMIGHTVKPDAIIYSVLINAFADVGNVIKATGYLDRMRNAGFVG-NQ 619
Query: 508 RSCNIILSAYLSSGDFVKAEKIYDLM 533
N ++ Y G +A++ Y L+
Sbjct: 620 AIYNSLMKLYTKIGYLKEAQQTYTLL 645
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 152/354 (42%), Gaps = 18/354 (5%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + +++ F + + G P + F+ +I A + G LD+A I+ +
Sbjct: 358 TTLVTALTRQKHFHSLLSLISKVQKNGLRPDTILFNAIINA---SSESGNLDQAMKIFEK 414
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M + G +P S N+L + G + K L+++ + +L + +Q + + I
Sbjct: 415 MKE-SGCKPTASTFNTLIKGY----GKIGK--LEESSRLLEMMLRDEM-LQPNDRTCNIL 466
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL-RLLESD 362
+ ++ + E + +MQ G + ++ R ++ G AE + R+L +
Sbjct: 467 VQAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLARAYSRIGSTCTAEDMIIPRMLHNK 526
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+ Y + G+ ++L F M+E ++ ++ +I+ + +
Sbjct: 527 VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVG 586
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESL 481
++ E G+KP + ++ L N + ++G R + + LE P+ + I +
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHAFSILAKGY 646
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIYDLM 533
AG EKAE+I N M + GV N I+S + S+G+ KA ++Y+ M
Sbjct: 647 ARAGEPEKAEQILNQM---RKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKM 697
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 61/339 (17%), Positives = 139/339 (41%), Gaps = 15/339 (4%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
+Q++ R D L + + + + IF+ + G P+ TF+ LI Y
Sbjct: 380 VQKNGLRPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI-- 437
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G L+E+ + M++ QP N L +A ++ +++A I + + + G
Sbjct: 438 -GKLEESSRLLEMMLRDEMLQPNDRTCNILVQAWCNQ------RKIEEAWNIVYKMQSFG 490
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
++ ++ L +S + ++ + M + +++ +EG +E+
Sbjct: 491 VKPDAVTFNTLARAYSRIGSTCTAEDMIIPR-MLHNKVKPNVRTCGTIVNGYCEEGKMEE 549
Query: 351 AEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
A + + R+ E G+ FV+ ++ + I + E+ M+E V + +
Sbjct: 550 ALRFFYRMKEL--GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTL 607
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KC 467
+ + + E + ++ +E G+ P + ++ L Y G ++ ++ +
Sbjct: 608 MNAWSSVGDMKRCEEIYRDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGV 667
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN 506
RPN IY + +AG ++KA +++N M + N
Sbjct: 668 RPNVVIYTQIISGWCSAGEMKKAMQVYNKMRGSVGLSPN 706
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 124/308 (40%), Gaps = 34/308 (11%)
Query: 238 CSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI 297
C I + G + R L N L +P Q+A IF+ L+ G +
Sbjct: 307 CVICSGGTTCGDVRSRTKLMNGLIER--GRP--------QEAHSIFNTLIEEGHKPSIIT 356
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
Y+ L+ + Q + +SL+ K +Q+ G + +++ ++ G+++ A K + +
Sbjct: 357 YTTLVTALTRQKHF-HSLLSLISK-VQKNGLRPDTILFNAIINASSESGNLDQAMKIFEK 414
Query: 358 LLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREM-QERLGSASVPAYHKIIELLCKAE 416
+ ES F ++ Y KIG+ +S + M ++ + + + +++ C
Sbjct: 415 MKESGCKPTASTFNTLIKGYGKIGKLEESSRLLEMMLRDEMLQPNDRTCNILVQAWCNQR 474
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG---------MHDRLHLAFSECLEKC 467
+ E +++ + G+KP ++ L Y +G + LH K
Sbjct: 475 KIEEAWNIVYKMQSFGVKPDAVTFNTLARAYSRIGSTCTAEDMIIPRMLH-------NKV 527
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVK 525
+PN G + G +E+A F M + +GV N N ++ +L+ D
Sbjct: 528 KPNVRTCGTIVNGYCEEGKMEEALRFFYRM---KELGVHPNLFVFNSLIKGFLNINDMDG 584
Query: 526 AEKIYDLM 533
++ DLM
Sbjct: 585 VGEVVDLM 592
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 85/207 (41%), Gaps = 8/207 (3%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK---ME 375
KK+ + A FEE KE L+ + K+ + + + G + M
Sbjct: 268 FKKDYKPAVFEEKKEANLADVEAVFKDSEEGRVQLRSFPCVICSGGTTCGDVRSRTKLMN 327
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ G ++ IF + E S+ Y ++ L + + SL+ + + G++P
Sbjct: 328 GLIERGRPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVQKNGLRP 387
Query: 436 ---LMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
L + IN ++ NL ++ E C+P + + ++ G +E++
Sbjct: 388 DTILFNAIINASSESGNLDQAMKIFEKMKE--SGCKPTASTFNTLIKGYGKIGKLEESSR 445
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLS 519
+ M D+ + N R+CNI++ A+ +
Sbjct: 446 LLEMMLRDEMLQPNDRTCNILVQAWCN 472
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 120/294 (40%), Gaps = 22/294 (7%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+I + E R+ E M++ + + L +RK + +I + + G P
Sbjct: 436 KIGKLEESSRLLEMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDA 495
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+TF+ L AY + C+ + +I PR LHN + + V G + Y
Sbjct: 496 VTFNTLARAYSR------IGSTCTAEDMII------PR-MLHNKV-KPNVRTCGTIVNGY 541
Query: 276 LQQAEF-----IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE 330
++ + F+ + G+ +++ LI + + D + + + M++ G +
Sbjct: 542 CEEGKMEEALRFFYRMKELGVHPNLFVFNSLI--KGFLNINDMDGVGEVVDLMEEFGVKP 599
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIF 390
+++ + GD++ E+ + +LE AF + YA+ GE K+ +I
Sbjct: 600 DVVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQIL 659
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF-VETGMKPLMPSYINL 443
+M++ +V Y +II C A E + + + G+ P + +Y L
Sbjct: 660 NQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKMRGSVGLSPNLTTYETL 713
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 6/211 (2%)
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE----SDNGIP- 366
D R + ++M ++G K +L+ + G ++ A +L++ + +N P
Sbjct: 225 DTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPD 284
Query: 367 TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
++ + G+ K+ ++F EM + S+ Y+ +I++ CK E ++
Sbjct: 285 VVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFD 344
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTIYGIYLESLKNAG 485
+ + G P + +Y L + G DR + L E C PN Y + + L G
Sbjct: 345 DMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEEG 404
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
+IEKA +F M + N + NII+SA
Sbjct: 405 DIEKALHLFETMSKGEECLPNQDTYNIIISA 435
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
P F ++A K K+ + R ++ R +V Y+ + + C+ ++T ++++
Sbjct: 177 PLFNSLLDALVKSRHAGKAASLVRALERRFPPDAV-TYNTLADGWCRVKDTSRALDILRQ 235
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL---------EKCRPNRTIYGIYL 478
VE+G+ P +Y + + G +L A+ L E C+P+ Y L
Sbjct: 236 MVESGIAPTKTTYNIILKGFFRSG---QLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVL 292
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKY 538
L AG ++KA ++F+ M S + + + N ++ G+ A ++D M K Y
Sbjct: 293 HGLGVAGQLDKARKVFDEM-SREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGY 351
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 138/320 (43%), Gaps = 34/320 (10%)
Query: 233 CLDEACSIYNRMIQLGGYQPRPSL--HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
CLD+A S++ +M+ +P PS + L +ALV K+Y +S
Sbjct: 52 CLDDAFSLFRQMVTT---KPLPSAVSFSKLLKALVHM-----KHY------------SSV 91
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKK-----EMQQAGFEEG---KEVLLSVL-RV 341
+ I ++I+ I + ++ + L+ + + F++G EV + L R
Sbjct: 92 VSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRG 151
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
E V+DA + +L+ + P + M+ K G K+ ++ R M++ +
Sbjct: 152 LFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKP 211
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
Y+ +I+ CK + SL+ E + + P + +Y +L + L +++ F
Sbjct: 212 DTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLF 271
Query: 461 SECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
E + P+ + ++ L G +E AEEI +M ++ + N + N+++ Y
Sbjct: 272 LEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYM-IEKGVEPNEITYNVVMDGYCL 330
Query: 520 SGDFVKAEKIYDLMCLKKYE 539
G +A +I+D M K E
Sbjct: 331 RGQMGRARRIFDSMIDKGIE 350
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 122/285 (42%), Gaps = 14/285 (4%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+Q D T L D +GK ++ K R +F ++I+ P TF+ +I
Sbjct: 239 MKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCK--- 295
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G +++A I MI+ G +P +N V G + + +A IF +++ G
Sbjct: 296 EGKVEDAEEIMTYMIE-KGVEPNEITYN------VVMDGYCLRGQMGRARRIFDSMIDKG 348
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+E DI S ++ Y + ++ L +E+ Q G + +LR + G E
Sbjct: 349 IE--PDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTEC 406
Query: 351 AEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
A K + +++ IP + Y K G +++ F +++ R ++ Y +I
Sbjct: 407 A-KIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVI 465
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
LCK + + + ++ G+ P + +Y + + Y G+ D
Sbjct: 466 NGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLD 510
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 8/212 (3%)
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
K+M + G + ++ C K GDVE AE+ L +ES P F Y + Y
Sbjct: 186 KKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQL-LNEMESRFIFP-DLFTYNTLISLYC 243
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
K G ++L I M+ S + Y+ +I C+ L +E G P
Sbjct: 244 KKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHV 301
Query: 439 SYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+Y L + Y + + + L L +E P Y L L G I+ A + N M
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEM 361
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
S++ + + +CN +++AY GD A K+
Sbjct: 362 -SERKVEPDNVTCNTLINAYCKIGDMGSAMKV 392
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 25/219 (11%)
Query: 240 IYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY--YLQQAE--FIFHNLLTSGLEIQK 295
+Y +M+++G P + N L A K G + K L + E FIF +L T
Sbjct: 184 VYKKMVRVG-VVPNIHIFNVLIHA-CCKSGDVEKAEQLLNEMESRFIFPDLFT------- 234
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
Y+ LI L+ + + E + + + M++ G S++ +EG + +A
Sbjct: 235 --YNTLISLYC-KKGMHYEALGI-QDRMERGGVSPDIVTYNSLIYGFCREGRMREA---- 286
Query: 356 LRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELL 412
LRL NG Y ++ Y ++ + ++L + RE+ E G V Y+ I+ L
Sbjct: 287 LRLFREINGATPNHVTYTTLIDGYCRVNDLEEALRL-REVMEVEGLHPGVVTYNSILRKL 345
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
C+ + + L+ E E ++P + L N Y +G
Sbjct: 346 CEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIG 384
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 134/316 (42%), Gaps = 38/316 (12%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
++ + G + E M Q D L D K + K +++FD++ +G P+
Sbjct: 395 KVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNV 454
Query: 216 MTFHILIVA-------------YLSAPVQGCLDEACS---IYNRMIQLGGYQPRPSLHNS 259
+T + L+ ++ A +G +A + + N + ++ L N
Sbjct: 455 VTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNE 514
Query: 260 LFRALVSKPGGLSKYYL----------QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
+ ++ S P + Y L A F+ L G+ Y+ LI +
Sbjct: 515 MLKSGCS-PDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTN 573
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
R+ + KEM++AG + +++ +K GD++ A+K +++++ +PT A
Sbjct: 574 KF--HRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKA-GVVPTVA 630
Query: 370 -FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA----YHKIIELLCKAEETELTESL 424
+ + AY G +++EIF++M+ ++ VP Y+ +I LCK + + SL
Sbjct: 631 TYGAVINAYCLNGNGNEAMEIFKDMK---AASKVPPNTVIYNILINSLCKNNKVKSAVSL 687
Query: 425 MKEFVETGMKPLMPSY 440
M++ G+ P +Y
Sbjct: 688 MEDMKIWGVTPNTTTY 703
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 132/330 (40%), Gaps = 24/330 (7%)
Query: 209 QGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKP 268
+G P +T++ LI + A G +++ +++ M + G P N+L
Sbjct: 413 KGCAPDTITYNCLIDGFCKA---GEIEKGKELFDEMNK-EGVAPNVVTVNTLV------- 461
Query: 269 GGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
GG+ + + A F G++ Y+ LI +N E+ L EM ++G
Sbjct: 462 GGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNF--EKAMELFNEMLKSG 519
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSL 387
V +++ ++ G + DA L + T + + + + +F +
Sbjct: 520 CSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVF 579
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
E+ +EM+E Y+ +I K + + + +M++ ++ G+ P + +Y + N Y
Sbjct: 580 EMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAY 639
Query: 448 LNLGMHDRLHLAFSE--CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV 505
G + F + K PN IY I + SL ++ A + M + GV
Sbjct: 640 CLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDM---KIWGV 696
Query: 506 --NTRSCNIILSAYLSSGDFVKAEKIYDLM 533
NT + N I D EK+++ M
Sbjct: 697 TPNTTTYNAIFKGLRDEKDL---EKVFEFM 723
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 69/170 (40%), Gaps = 8/170 (4%)
Query: 359 LESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
+ S G Y ++ + K GE K E+F EM + + +V + ++ +C+
Sbjct: 409 MRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTG 468
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYG 475
+ E GMK +Y L N + N+ ++ F+E L+ C P+ +Y
Sbjct: 469 RVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYY 528
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDF 523
+ AG + A + + + +G+ +T N ++ + + F
Sbjct: 529 TLISGFSQAGRMADASFVLAEL---KKLGIRPDTVCYNTLIGGFCRTNKF 575
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 82/431 (19%), Positives = 161/431 (37%), Gaps = 34/431 (7%)
Query: 150 LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQ 209
L R R+ G+ ++ M++ + A L + +E F + ++ + ++
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAV-LESAACNSLLTGLAREGNFNRMNELMEKMVEM 334
Query: 210 GRVPSEMTFHILIVAYLSAPVQGC----LDEACSIYNRMI---QLGG----YQPRPSLHN 258
P+ +TF ILI C +D+A + +M + GG +P ++N
Sbjct: 335 DIQPNVVTFGILI-------NHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYN 387
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
+L GL K QQ + S D + + + + E+
Sbjct: 388 TLI-------DGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKE 440
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEA 376
L EM + G + +++ + G V A ++ G+ A Y + A
Sbjct: 441 LFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVE--AQRRGMKGDAVTYTALINA 498
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
+ + F K++E+F EM + S Y+ +I +A ++ E + G++P
Sbjct: 499 FCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPD 558
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
Y L + R+ E E +P+ Y + G+++ A+++
Sbjct: 559 TVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMR 618
Query: 496 HMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY-DLMCLKKYEIESAWMEKLDYVLSL 554
M + + +++AY +G+ +A +I+ D+ K + L L
Sbjct: 619 KMIKAGVVPT-VATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCK 677
Query: 555 NRKEVKKPVSL 565
N K VK VSL
Sbjct: 678 NNK-VKSAVSL 687
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 167/388 (43%), Gaps = 33/388 (8%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + ++++F + + + G P + + +I A+ + G +DEA I+ +
Sbjct: 99 TTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDS---GKVDEAMKIFQK 155
Query: 244 MIQLGGYQPRPSLHNSLFRA--LVSKPGGLSKY--YLQQAEFIFHNLLTSGLEIQKDIYS 299
M + G +P S +N+L + +V +P K + Q E + N T + IQ
Sbjct: 156 MKEYG-CKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYNILIQA---- 210
Query: 300 GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
W + +E ++L K M +G + ++ R A+ G+ E AE+ L++
Sbjct: 211 ---WCTKKKL---EEAWNVLHK-MVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQ 263
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA-YHKIIELLCKAEET 418
+ + Y K G ++L M+E LG P ++ +I+ A +T
Sbjct: 264 YNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKE-LGVHPNPVVFNSLIKGYLDATDT 322
Query: 419 ELTE---SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIY 474
+ +LM+EF G+KP + ++ + N + + G+ D F++ ++ P+ Y
Sbjct: 323 NGVDEALTLMEEF---GIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAY 379
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
I + AG KAE + M S + N I+S + ++G K ++ + L C
Sbjct: 380 SILAKGYVRAGQPRKAESLLTSM-SKYGVQTNVVIFTTIISGWCAAG---KMDRAFSL-C 434
Query: 535 LKKYEIESAWMEKLDYVLSLNRKEVKKP 562
K +E+ ++ K L E K+P
Sbjct: 435 EKMHEMGTSPNLKTYETLIWGYGEAKQP 462
>gi|224112321|ref|XP_002316152.1| predicted protein [Populus trichocarpa]
gi|222865192|gb|EEF02323.1| predicted protein [Populus trichocarpa]
Length = 785
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 26/282 (9%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
+ F++++ M +++ +R + + L D MGK + ++ ++ G PS + +
Sbjct: 279 DAAFKLFQEMKERN-FRPSLGIFSSLVDSMGKAGRLETSMKVYMEMQGLGLRPSAIMYVS 337
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
LI +Y A G LD A +++ M ++ G++P L+ + + +K G L A
Sbjct: 338 LIESYTKA---GKLDAALRLWDEM-KIAGFRPNFGLYTLIIESH-AKSGKL-----DIAM 387
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
IF ++ +G YS L+ +H+ +D L M AG G ++L
Sbjct: 388 SIFRDMEKAGFLPTPSTYSSLLEMHAASGQVDAAM--KLYNSMTNAGLRPGLSTYTALLT 445
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
+ A + V+ A K L + + A M Y K G SL R M S+
Sbjct: 446 LLAHKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLSLRWLRFMS----SS 500
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
+ + II +L ES MK + KPL+ +Y+N
Sbjct: 501 GIRTNNFIIR--------QLFESCMKNGLYESAKPLLETYVN 534
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 72/369 (19%), Positives = 158/369 (42%), Gaps = 19/369 (5%)
Query: 157 IRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII-NQGRVPSE 215
I E++ +++W +Q WY + L D + + R F + +FD+++ + + ++
Sbjct: 132 INESDALLSLFKWAKRQTWYVPNDECYVMLFDGLNQSRDFDGIQSLFDEMVCDSIKSATQ 191
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+ + ++ YL+ + + C + +Q G + +N L + ++K GL
Sbjct: 192 FSAYNRVLKYLAKAEKLEVSFCCF---KKVQDSGCKIDTETYNILMKLFLNK--GLP--- 243
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+A I+ + + + Y +I + +D L +EM++ F +
Sbjct: 244 -YKAFEIYETMEAAHCSLDVSTYELMIPSLAKSGRLDAA--FKLFQEMKERNFRPSLGIF 300
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM 393
S++ K G +E + K ++ + G+ A +Y +E+Y K G+ +L ++ EM
Sbjct: 301 SSLVDSMGKAGRLETSMKVYMEM--QGLGLRPSAIMYVSLIESYTKAGKLDAALRLWDEM 358
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
+ + Y IIE K+ + ++ S+ ++ + G P +Y +L M+ G
Sbjct: 359 KIAGFRPNFGLYTLIIESHAKSGKLDIAMSIFRDMEKAGFLPTPSTYSSLLEMHAASGQV 418
Query: 454 D-RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI 512
D + L S RP + Y L L + ++ A +I M + V+ + ++
Sbjct: 419 DAAMKLYNSMTNAGLRPGLSTYTALLTLLAHKKLVDVAAKILLEMKA-MGFSVDVSASDV 477
Query: 513 ILSAYLSSG 521
++ Y+ G
Sbjct: 478 LM-VYIKDG 485
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 2/161 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ + AK G + ++F+EM+ER S+ + +++ + KA E + + E G+
Sbjct: 269 IPSLAKSGRLDAAFKLFQEMKERNFRPSLGIFSSLVDSMGKAGRLETSMKVYMEMQGLGL 328
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
+P Y++L Y G D + E + RPN +Y + +ES +G ++ A
Sbjct: 329 RPSAIMYVSLIESYTKAGKLDAALRLWDEMKIAGFRPNFGLYTLIIESHAKSGKLDIAMS 388
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
IF M + + + + +L + +SG A K+Y+ M
Sbjct: 389 IFRDMEKAGFLPTPS-TYSSLLEMHAASGQVDAAMKLYNSM 428
>gi|356557981|ref|XP_003547288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 706
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 95/218 (43%), Gaps = 1/218 (0%)
Query: 323 MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGE 382
M G E V S++ + G+ + A + + R + T F ++ Y G
Sbjct: 242 MPSFGCEPDNNVCSSMIYAYTRTGNTDMALRLYDRAKAGKWHVDTAVFSGLIKMYGVSGN 301
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
++ L ++ +M+ ++ Y+ ++ + +A+ +++ E + G+ P P+Y
Sbjct: 302 YVGCLNVYNDMKVLGAKPNLTTYNALLYAMGRAKRARDAKAIYGEMISNGLSPNWPTYAA 361
Query: 443 LTNMYLNLGMHDRLHLAFSECLEKCRP-NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQ 501
L Y + + E EK + + +Y + + N G +++A +IF HM S
Sbjct: 362 LLQAYCRARFNRDALNVYKEMKEKGKDLDILLYNMLFDMCANVGCVDEAVKIFEHMKSSG 421
Query: 502 TIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
T ++ + +++ Y S G ++ E +++ M +E
Sbjct: 422 TCPPDSFTYASLINMYSSIGKILEMEAMFNEMMESGFE 459
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 142/321 (44%), Gaps = 25/321 (7%)
Query: 217 TFHILIVAY-LSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
F LI Y +S GCL+ +YN M LG +P + +N+L A+ G +K
Sbjct: 288 VFSGLIKMYGVSGNYVGCLN----VYNDMKVLGA-KPNLTTYNALLYAM-----GRAKR- 336
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+ A+ I+ ++++GL Y+ L+ + + +++ +++ K EM++ G + +
Sbjct: 337 ARDAKAIYGEMISNGLSPNWPTYAALLQAYC-RARFNRDALNVYK-EMKEKGKDLDILLY 394
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM 393
+ +CA G V++A K + ++S P +F Y + Y+ IG+ ++ +F EM
Sbjct: 395 NMLFDMCANVGCVDEAVKIF-EHMKSSGTCPPDSFTYASLINMYSSIGKILEMEAMFNEM 453
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
E ++ ++ KA+ T+ + + ++ G+ P +Y +
Sbjct: 454 MESGFEPNIIVLTSLVHCYGKAKRTDDVVKIFNQLMDLGISP--DGRFCDCLLYAMTQVP 511
Query: 454 DRLHLAFSECLEKCRPN-RTIYGIYLESLKNAGNIE-KAEEIFNHMHSDQTIGVNTRSCN 511
S C+EK P ++ +E + G+ +A E+FN +D V CN
Sbjct: 512 KEELGKLSGCVEKANPKLGSVLRYIMEKQEGGGDFRTEASELFNSTEAD----VKKSMCN 567
Query: 512 IILSAYLSSGDFVKAEKIYDL 532
++ +S +A + DL
Sbjct: 568 CLIDLCVSLDVPDRARDLLDL 588
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/347 (19%), Positives = 140/347 (40%), Gaps = 30/347 (8%)
Query: 176 YRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLD 235
Y L K+ D+ G E+ +FD+++++G P+ +TF +I A V
Sbjct: 184 YNVTLKLFRKVKDFEGAEK-------LFDEMLHRGVNPNLITFSTMISC---ASVCSLPH 233
Query: 236 EACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQK 295
+A + M G +P ++ +S+ A ++ G A ++ +
Sbjct: 234 KAVKWFEMMPSFGC-EPDNNVCSSMIYA-YTRTGN-----TDMALRLYDRAKAGKWHVDT 286
Query: 296 DIYSGLIWLHSYQDNIDKERISLLK--KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
++SGLI ++ N + L +M+ G + ++L + DA+
Sbjct: 287 AVFSGLIKMYGVSGNY----VGCLNVYNDMKVLGAKPNLTTYNALLYAMGRAKRARDAKA 342
Query: 354 TWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
+ ++ + P + ++AY + +L +++EM+E+ + Y+ + ++
Sbjct: 343 IYGEMISNGLSPNWPTYAALLQAYCRARFNRDALNVYKEMKEKGKDLDILLYNMLFDMCA 402
Query: 414 KAEETELTESLMKEFVETGMKPLMP---SYINLTNMYLNLGMHDRLHLAFSECLEKC-RP 469
+ + + +G P P +Y +L NMY ++G + F+E +E P
Sbjct: 403 NVGCVDEAVKIFEHMKSSGTCP--PDSFTYASLINMYSSIGKILEMEAMFNEMMESGFEP 460
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
N + + A + +IFN + D I + R C+ +L A
Sbjct: 461 NIIVLTSLVHCYGKAKRTDDVVKIFNQLM-DLGISPDGRFCDCLLYA 506
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 124/289 (42%), Gaps = 19/289 (6%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIY-NRM 244
L D MGK + + + +++ +G + +T++ +I + + L++A +Y N M
Sbjct: 921 LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRR---LEQAIDLYYNLM 977
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
Q G+ P P + L L L ++ AE +F+ +L G + IY+ L+
Sbjct: 978 SQ--GFSPTPCTYGPLLDGL------LKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 1029
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
H N E++ L ++M G + ++ K G + D + +LLE G
Sbjct: 1030 HRIAGNT--EKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM--G 1085
Query: 365 IPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+ Y + + K +++ +F EMQ++ ++ Y+ +I L KA +
Sbjct: 1086 LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAG 1145
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPN 470
+ +E + G KP + +Y L Y G D + A+ + C PN
Sbjct: 1146 KMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 4/157 (2%)
Query: 370 FVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
F Y + +A K + L++ EM + ++ Y+ II L K+ E L
Sbjct: 916 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 975
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGN 486
+ G P +Y L + L G + F+E LE C+ N TIY I L + AGN
Sbjct: 976 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 1035
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
EK +F M DQ I + +S II+ +G
Sbjct: 1036 TEKVCHLFQDM-VDQGINPDIKSYTIIIDTLCKAGQL 1071
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 77/399 (19%), Positives = 161/399 (40%), Gaps = 46/399 (11%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ Y + T + D + + + + ++FD++ +G VP + +++ LI +L A
Sbjct: 451 MKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADR 510
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG----GLSKYYLQQAEFIFHNL 286
G +A ++ M + G +P H LF K G + +Y L +++ I ++
Sbjct: 511 FG---DALELFKHM-DIHGPKPNGYTH-VLFINYYGKSGESIKAIQRYELMKSKGIVPDV 565
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK---EMQQAGFEEGKEVLLSVLRVCA 343
+ + SG R+ + K+ E++ G +++ C+
Sbjct: 566 VAGNAVLFGLAKSG--------------RLGMAKRVFHELKAMGVSPDTITYTMMIKCCS 611
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKM-EAYAKIGEFMKSLEIFREMQERLGSASV 402
K ++A K + ++E +N +P V + + K G ++ IF +++E +
Sbjct: 612 KASKFDEAVKIFYDMIE-NNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTD 670
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN-MYLNLGMHDRLHLAFS 461
Y+ ++ L + + + L++E + P + +Y + + + N ++D L + +S
Sbjct: 671 GTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYS 730
Query: 462 ECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH---------------SDQTIGVN 506
+ C P+ + Y + L +A IF M S IG+
Sbjct: 731 MTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLM 790
Query: 507 TRSCNIILSAYLSSGDFVKAEKIYDLM--CLKKYEIESA 543
+ +II +L G + LM LKK IE +
Sbjct: 791 KEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKS 829
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 85/194 (43%), Gaps = 2/194 (1%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
+++V G + DA+ + ++ +SD ++ ++ + G+ +EI+ M+
Sbjct: 396 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 455
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRL 456
+ +V AY +I+ LC+ + E + G+ P SY +L + +L D L
Sbjct: 456 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 515
Query: 457 HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
L + +PN + +++ +G KA + + M S + I + + N +L
Sbjct: 516 ELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKS-KGIVPDVVAGNAVLFG 574
Query: 517 YLSSGDFVKAEKIY 530
SG A++++
Sbjct: 575 LAKSGRLGMAKRVF 588
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 364 GIPTPAFVYKMEAY--AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
GI A+ Y Y K G ++LE++R M SV Y ++ K + E
Sbjct: 280 GIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETV 339
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL----EKCRPNRTIYGIY 477
L++E G+KP + SY + LG R A+ E C+P+ + +
Sbjct: 340 LWLLREMEAHGVKPNVYSYTICIRV---LGQAKRFDEAYRILAKMENEGCKPDVITHTVL 396
Query: 478 LESLKNAGNIEKAEEIFNHM-HSDQ 501
++ L +AG I A+++F M SDQ
Sbjct: 397 IQVLCDAGRISDAKDVFWKMKKSDQ 421
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 112/283 (39%), Gaps = 48/283 (16%)
Query: 155 MRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
+R+ + + GFR+ + M + D + L + + KE K ++FD++I G VP+
Sbjct: 182 IRLGDLDEGFRL-KSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPN 240
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY 274
+TF LI + G +D A Y M++ G+ P
Sbjct: 241 GVTFTTLIDGHCKT---GSIDLAMEAYKEMLR-QGFSP---------------------- 274
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
+ I +N L GL + D L QD ID EM G + K
Sbjct: 275 -----DLITYNTLIYGLCKEGD-------LKQAQDLID---------EMSMKGLKPDKIT 313
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
+++ KEGD+E A K R+++ + + A+ + + G+ + + ++ REM
Sbjct: 314 YTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREML 373
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
Y II CK + ++ L+KE G P +
Sbjct: 374 SVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPCV 416
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 112/262 (42%), Gaps = 16/262 (6%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
KE + + +FD+I G PS ++F+ L+ Y+ G LDE + + M G Q
Sbjct: 148 KEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRL---GDLDEGFRLKSAM-HGSGIQ 203
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P ++ L L + SK + A +F ++ +GL ++ LI H +I
Sbjct: 204 PDVYTYSVLINGLCKE----SK--MNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSI 257
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
D + KEM + GF +++ KEGD++ A+ + S G+
Sbjct: 258 DLAMEAY--KEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEM--SMKGLKPDKIT 313
Query: 372 YK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
Y ++ K G+ + + + M + AY +I LC+ ++ E +++E +
Sbjct: 314 YTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREML 373
Query: 430 ETGMKPLMPSYINLTNMYLNLG 451
G+KP +Y + N + G
Sbjct: 374 SVGLKPDNGTYTMIINEFCKKG 395
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 6/163 (3%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+E + K+ F ++E+ E AS+ ++ ++ CK E L +S+ E + G+
Sbjct: 108 LEHFMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGL 167
Query: 434 KPLMPSYINLTNMYLNLGMHD---RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKA 490
+P + S+ L N Y+ LG D RL A +P+ Y + + L + A
Sbjct: 168 RPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHG--SGIQPDVYTYSVLINGLCKESKMNDA 225
Query: 491 EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
E+F+ M + + N + ++ + +G A + Y M
Sbjct: 226 NELFDEMIGNGLV-PNGVTFTTLIDGHCKTGSIDLAMEAYKEM 267
>gi|297733848|emb|CBI15095.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 11/220 (5%)
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
L V R + G +++A + +L++ + I + + + GE K+ +F EM
Sbjct: 194 LFKVFRGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMI 253
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MH 453
SV Y+ I++LCK + E S+ +E + G P +Y + ++G M
Sbjct: 254 GEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRME 313
Query: 454 DRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
+ ++C PN IY + + +A IEK +F M D N + NI+
Sbjct: 314 KAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKM-GDADCLPNLDTYNIL 372
Query: 514 LSA--------YLSSGDFVKAEKIYDLMCLKKYEI-ESAW 544
+SA YL + + E + C + EI E W
Sbjct: 373 ISAMFVRKKSDYLLTAGKLLIEMVERGFCKRNSEIAEQMW 412
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 133/334 (39%), Gaps = 20/334 (5%)
Query: 178 FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEA 237
D T + +++ K +K + + + I G P+ T++ L+ G L+EA
Sbjct: 257 IDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCK---MGRLEEA 313
Query: 238 CSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI 297
+ +++ G P + SL L + Y L F + + GL +
Sbjct: 314 IDLLRKIVD-NGCTPDVVTYTSLIDGLGKEKRSFEAYKL------FKEMASRGLALDTVC 366
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
Y+ LI I + S + K M G L +++ +K G + A + + +
Sbjct: 367 YTALIRGLLQTGKIPQA--SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIF-K 423
Query: 358 LLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
+E+ G+ VY + K + +LE+ +M++ + Y+ +I+ LCK+
Sbjct: 424 SMEA-RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKS 482
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYG 475
+ E + E +E G KP + +Y L + G D A L+ +R +Y
Sbjct: 483 GDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTD----AACGVLDDMSSSRFVYS 538
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
++ L +G +E +F+ M TR+
Sbjct: 539 SLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRT 572
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 139/327 (42%), Gaps = 26/327 (7%)
Query: 210 GRVPSEMTFHILIVAYLSAPVQGC-LDEACSIYNRMIQLG---GYQPRPSLHNSLFRALV 265
G P TF+I ++ ++G L+E C+I +R ++ G G+ +L +L+ A
Sbjct: 387 GHKPDSATFNIA----MNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMA-- 440
Query: 266 SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
G ++ + F+ ++ GL Y+ +I +DK + KEMQ
Sbjct: 441 ---GKVT-----EGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTF--KEMQY 490
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEF 383
G +++ K G++ + + LLE +G F + ++ + +
Sbjct: 491 KGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLE--HGFKPDIFTFSSIIDGLCRAKQI 548
Query: 384 MKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINL 443
+L F EM S + Y+ +I LC + + L+++ G+ P + S+ L
Sbjct: 549 EDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNAL 608
Query: 444 TNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQT 502
+ +G + FS L P+ Y +++ +G +A+E+F M ++
Sbjct: 609 IQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGC 668
Query: 503 IGVNTRSCNIILSAYLSSGDFVKAEKI 529
+ ++ +CNIIL A + F A+KI
Sbjct: 669 MP-DSFTCNIILDALVKQDQFEAAQKI 694
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 101/223 (45%), Gaps = 7/223 (3%)
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
E ++L + ++Q G + G L++++ G V + + ++++ +G+ Y
Sbjct: 410 EVCNILDRFVEQ-GMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVK--DGLLCNVCSYN 466
Query: 374 M--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
M + + K K+ F+EMQ + ++ ++ +I+ CK E + L+ +E
Sbjct: 467 MVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEH 526
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKA 490
G KP + ++ ++ + + FSE + PN Y I + SL G++ ++
Sbjct: 527 GFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRS 586
Query: 491 EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++ M +D I + S N ++ ++ G A+K++ M
Sbjct: 587 MKLLRKMQTD-GINPDVFSFNALIQSFCRMGKVEDAKKLFSSM 628
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 4/170 (2%)
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
GIP + ++ Y K GE KS ++ + E + + II+ LC+A++ E
Sbjct: 492 GIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDA 551
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTIYGIYLES 480
E V G+ P +Y L + +G R + L + P+ + ++S
Sbjct: 552 LGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQS 611
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
G +E A+++F+ M S I N I + SG F +A++++
Sbjct: 612 FCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFI-KVFCQSGRFNEAKELF 660
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 8/212 (3%)
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
K+M + G + ++ C K GDVE AE+ L +ES P F Y + Y
Sbjct: 186 KKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQL-LNEMESRFIFP-DLFTYNTLISLYC 243
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
K G ++L I M+ S + Y+ +I C+ L +E G P
Sbjct: 244 KKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHV 301
Query: 439 SYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+Y L + Y + + + L L +E P Y L L G I+ A + N M
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEM 361
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
S++ + + +CN +++AY GD A K+
Sbjct: 362 -SERKVEPDNVTCNTLINAYCKIGDMGSAMKV 392
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 25/219 (11%)
Query: 240 IYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY--YLQQAE--FIFHNLLTSGLEIQK 295
+Y +M+++G P + N L A K G + K L + E FIF +L T
Sbjct: 184 VYKKMVRVG-VVPNIHIFNVLIHA-CCKSGDVEKAEQLLNEMESRFIFPDLFT------- 234
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
Y+ LI L+ + + E + + + M++ G S++ +EG + +A
Sbjct: 235 --YNTLISLYC-KKGMHYEALGI-QDRMERGGVSPDIVTYNSLIYGFCREGRMREA---- 286
Query: 356 LRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELL 412
LRL NG Y ++ Y ++ + ++L + RE+ E G V Y+ I+ L
Sbjct: 287 LRLFREINGATPNHVTYTTLIDGYCRVNDLEEALRL-REVMEVEGLHPGVVTYNSILRKL 345
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
C+ + + L+ E E ++P + L N Y +G
Sbjct: 346 CEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIG 384
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 122/289 (42%), Gaps = 14/289 (4%)
Query: 160 NETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFH 219
E FR++ +++ Y+ + T + +E K A+ + ++ QG P+ T+
Sbjct: 302 TERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYT 361
Query: 220 ILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQA 279
LI + G D A + N+M Q G+ P +N++ G K +Q+A
Sbjct: 362 TLIGGHCKG---GSFDRAFELMNKMKQ-EGFLPNIYTYNAVI------DGFCKKGKIQEA 411
Query: 280 EFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVL 339
+ + GL+ K Y+ LI H Q +I + L + M + G E S++
Sbjct: 412 YKVLRMATSQGLKFDKITYTILITEHCKQGHITYA-LDLFDR-MVENGCCPDIEAYTSLI 469
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
++ +E+++K + + L +PT + + Y K+G +L +F M +
Sbjct: 470 STYCQQRQMEESQKFFDKCLMI-GLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGC 528
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
A Y +I LCK E ++L + ++ + P + + LT Y
Sbjct: 529 FADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEY 577
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 11/217 (5%)
Query: 323 MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK----TWLRLLESDNGIPTPAFVYKMEAYA 378
M +AG + +++ VC +EG VE+ + W DN T + +
Sbjct: 172 MTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVV----VRSLC 227
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
+ G F E FR M E +V Y I+ LCK + +++E V G+KP +
Sbjct: 228 EKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVY 287
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
++ L + +G +R F + ++ +PN Y + + G + +AE +
Sbjct: 288 THTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVR 347
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M +Q + NT + ++ + G F +A ++ + M
Sbjct: 348 M-VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKM 383
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Query: 379 KIGEFMKSLEIFREMQERLGSA--SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
KIG+ +++E+F M+ER V Y I+ C + E +++ V G+KP
Sbjct: 163 KIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPN 222
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ +Y +L Y + GMH R LA ++K RP+ Y L + + EKA E+F
Sbjct: 223 IVAYNSLLGAYASRGMH-REALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVF 281
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSG 521
N M + + N S N ++ AY S+G
Sbjct: 282 NKMKKN-SCKPNKVSYNALIDAYGSAG 307
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 141/349 (40%), Gaps = 53/349 (15%)
Query: 199 CRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN 258
C+ IFD ++ +G P+ + ++ L+ AY S +G EA +I+N +I+ G +P +
Sbjct: 207 CKAIFDLMVAEGVKPNIVAYNSLLGAYAS---RGMHREALAIFN-LIKKNGLRPDIVSYT 262
Query: 259 SLFRAL--VSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERI 316
SL A ++P ++A +F+ + + + K Y+ LI + + KE +
Sbjct: 263 SLLNAYGRSAQP--------EKAREVFNKMKKNSCKPNKVSYNALIDAYG-SAGMLKEAV 313
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKE------------------------------- 345
LL EM++ G + + ++L C +
Sbjct: 314 GLLH-EMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKS 372
Query: 346 ----GDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSAS 401
GD E A + + + ES+ + + +K+G++ +SL F +M + S++
Sbjct: 373 YLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSST 432
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
Y +I K + ES ++G P + +Y L Y G R F
Sbjct: 433 KEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFK 492
Query: 462 EC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
E + P+ I +E+ G E+ ++ M ++I +N +S
Sbjct: 493 EMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMK-KKSIPLNQKS 540
>gi|15235161|ref|NP_195672.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75266408|sp|Q9SV96.1|PP358_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g39620, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2453; Flags: Precursor
gi|5042178|emb|CAB44697.1| putative protein [Arabidopsis thaliana]
gi|7270946|emb|CAB80625.1| putative protein [Arabidopsis thaliana]
gi|58013022|gb|AAW62964.1| chloroplast embryo-defective 2453 [Arabidopsis thaliana]
gi|332661694|gb|AEE87094.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 563
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/367 (19%), Positives = 138/367 (37%), Gaps = 81/367 (22%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
V+ WM +Q WY D + +KL MGK+ + +F ++ N G P ++ LI A+
Sbjct: 119 VFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAH 178
Query: 226 LSAPVQG-CLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
L + L++ ++M + QP +N L RA + Q +F
Sbjct: 179 LHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGK------VDQVNALFK 232
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
+L S + D+Y+ V+ K
Sbjct: 233 DLDMS--PVSPDVYT-----------------------------------FNGVMDAYGK 255
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
G +++ E R+ ++ F +++Y K EF K + F+ + ++P
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
++ +I KA + E + K+ + +PS+I M +
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMN---YIPSFITYECMIM---------------- 356
Query: 465 EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM-HSDQTIGVNTRSCNIILSAYLSSGDF 523
+YG G++ +A EIF + SD+ + +T N +L Y +G +
Sbjct: 357 --------MYGY-------CGSVSRAREIFEEVGESDRVLKAST--LNAMLEVYCRNGLY 399
Query: 524 VKAEKIY 530
++A+K++
Sbjct: 400 IEADKLF 406
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 8/166 (4%)
Query: 375 EAYAKIGEFMKSLEIFREMQ-ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
E K ++++ LE+FR MQ +R Y K+I ++ K +T + L E +G
Sbjct: 105 EELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGC 164
Query: 434 KPLMPSYINLTNMYLNLGMHD------RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNI 487
+P Y L +L+ R +L + +E+C+PN Y I L + +G +
Sbjct: 165 RPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKV 224
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++ +F + + + + N ++ AY +G + E + M
Sbjct: 225 DQVNALFKDLDM-SPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
>gi|326511196|dbj|BAJ87612.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 725
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 17/258 (6%)
Query: 196 FAKCRDI------FDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
+ KC I F ++ +G P+++T++IL+ AY S +Q + E S+ M LG
Sbjct: 388 YCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAY-SRRLQPEVVE--SLLLEMHDLG- 443
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
+QP +N L A G K ++AE F + G++ Y+ LI ++
Sbjct: 444 FQPNARSYNCLISAY-----GRQKKMSEKAEDAFLRMKKGGIKATSSSYTSLICAYAVSG 498
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
+K I+ L +M++ G + E ++L + + G+ E +TW + + G
Sbjct: 499 QYEKAHIAYL--DMKREGLKPSLETYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVT 556
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
F ++ AK G F+++ ++ E + + Y+ ++ K + L+KE
Sbjct: 557 FHMVLDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMS 616
Query: 430 ETGMKPLMPSYINLTNMY 447
+KP +Y L Y
Sbjct: 617 TLELKPDSVTYSTLIYAY 634
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 87/210 (41%), Gaps = 43/210 (20%)
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
GIP+ +Y M Y K + ++ +F EM+E+ + Y+ +++ + + E+
Sbjct: 373 GIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSRRLQPEVV 432
Query: 422 ESLMKEFVETGMKP------------------------------------LMPSYINLTN 445
ESL+ E + G +P SY +L
Sbjct: 433 ESLLLEMHDLGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKKGGIKATSSSYTSLIC 492
Query: 446 MYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
Y G +++ H+A+ + E +P+ Y L+ + AGN EK E + M +D+ +G
Sbjct: 493 AYAVSGQYEKAHIAYLDMKREGLKPSLETYTALLDIFRRAGNTEKLMETWKSM-TDEKVG 551
Query: 505 VNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
+ +++L G FV+A D++C
Sbjct: 552 CTRVTFHMVLDGLAKHGLFVQAR---DVIC 578
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 62/153 (40%), Gaps = 27/153 (17%)
Query: 394 QERLGSASVPA----YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY-- 447
Q +G +P+ Y+ I+ + CK + E E L E E G+KP +Y L + Y
Sbjct: 366 QSEMGKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSR 425
Query: 448 ---------LNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNI-EKAEEIFNHM 497
L L MHD L F +PN Y + + + EKAE+ F M
Sbjct: 426 RLQPEVVESLLLEMHD---LGF-------QPNARSYNCLISAYGRQKKMSEKAEDAFLRM 475
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
I + S ++ AY SG + KA Y
Sbjct: 476 KKG-GIKATSSSYTSLICAYAVSGQYEKAHIAY 507
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 128/326 (39%), Gaps = 34/326 (10%)
Query: 176 YRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLD 235
Y F FAL + + G E R I ++ G + LI Y S GC++
Sbjct: 109 YTFTFALKS-CGSFSGVEEG----RQIHGHVLKTGLGDDLFIQNTLIHLYASC---GCIE 160
Query: 236 EACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQK 295
+A + +RM++ R +VS LS Y ++ + G K
Sbjct: 161 DARHLLDRMLE---------------RDVVSWNALLSAYA-ERGLMELASRRVFGETPVK 204
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
++ S + Y + +L ++MQ AG + L+SVL CA G + E W
Sbjct: 205 NVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGE--W 262
Query: 356 LRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
+ NGI FV ++ Y+K G K+LE+F + + ++ II L
Sbjct: 263 VHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRK----DISTWNSIISGLS 318
Query: 414 KAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC--LEKCRPNR 471
+ + E + G KP +++ + + G+ D F+ + +P
Sbjct: 319 THGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTI 378
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHM 497
YG ++ L G +E+AEE+ M
Sbjct: 379 EHYGCMVDLLGRVGLLEEAEELVQKM 404
>gi|242033621|ref|XP_002464205.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
gi|241918059|gb|EER91203.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
Length = 521
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 7/183 (3%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEA 376
L MQ G E VL+SVL CA G ++ + W+ +G+ A V ++
Sbjct: 251 LFSAMQADGVEPNANVLVSVLGCCASLGALD--QGAWVHAYIDRHGVAMNALVVTALVDM 308
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
Y K G + ++F + + GSA + +++ +++ L + +L E G+ P
Sbjct: 309 YCKCGSVDDARQVFDAARSQ-GSAKLSSWNSMMQGLAVHGQWREAVALFSELRSYGLSPD 367
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
++I + Y + GM D AF+ + P YG +++L AG + +AE+
Sbjct: 368 NVTFIAVLTAYGHAGMPDEAQAAFASMATEHSVEPGIEHYGCLVDALARAGRLREAEDAI 427
Query: 495 NHM 497
M
Sbjct: 428 RSM 430
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 122/289 (42%), Gaps = 14/289 (4%)
Query: 160 NETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFH 219
E FR++ +++ Y+ + T + +E K A+ + ++ QG P+ T+
Sbjct: 194 TERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYT 253
Query: 220 ILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQA 279
LI + G D A + N+M Q G+ P +N++ G K +Q+A
Sbjct: 254 TLIGGHCKG---GSFDRAFELMNKMKQ-EGFLPNIYTYNAVI------DGFCKKGKIQEA 303
Query: 280 EFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVL 339
+ + GL+ K Y+ LI H Q +I + L + M + G E S++
Sbjct: 304 YKVLRMATSQGLKFDKITYTILITEHCKQGHITYA-LDLFDR-MVENGCCPDIEAYTSLI 361
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
++ +E+++K + + L +PT + + Y K+G +L +F M +
Sbjct: 362 STYCQQRQMEESQKFFDKCL-MIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGC 420
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
A Y +I LCK E ++L + ++ + P + + LT Y
Sbjct: 421 FADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEY 469
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 91/217 (41%), Gaps = 11/217 (5%)
Query: 323 MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK----TWLRLLESDNGIPTPAFVYKMEAYA 378
M +AG +++ VC +EG VE+ + W DN T + +
Sbjct: 64 MTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVV----VRSLC 119
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
+ G F E FR M E +V Y I+ LCK + +++E V G+KP +
Sbjct: 120 EKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVY 179
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
++ L + +G +R F + ++ +PN Y + + G + +AE +
Sbjct: 180 THTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVR 239
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M +Q + NT + ++ + G F +A ++ + M
Sbjct: 240 M-VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKM 275
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 105/264 (39%), Gaps = 9/264 (3%)
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
GL A +F + +G+ + L+ + + + E + L M + GF
Sbjct: 48 GLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGKV--EEVDALLAAMWRYGFS 105
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSL 387
V+R ++G +D + + R+LE+ G P Y ++ K ++
Sbjct: 106 LDNATCTVVVRSLCEKGRFKDVSEFFRRMLET--GTPPNVVNYTAWIDGLCKRRYVKQAF 163
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE-TGMKPLMPSYINLTNM 446
+ EM R +V + +I+ LCK TE L + ++ + KP + +Y +
Sbjct: 164 HVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGG 223
Query: 447 YLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV 505
Y G R + +E+ +PN Y + G+ ++A E+ N M + +
Sbjct: 224 YCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLP- 282
Query: 506 NTRSCNIILSAYLSSGDFVKAEKI 529
N + N ++ + G +A K+
Sbjct: 283 NIYTYNAVIDGFCKKGKIQEAYKV 306
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 126/333 (37%), Gaps = 50/333 (15%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
T ++ +C R + E GF V + +M+ D + L + + KE + + +FD++
Sbjct: 266 TLISGYC-RSKNVEEGF-VLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMC 323
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
G VP+ +TF LI G +D A + M G RP L
Sbjct: 324 EMGLVPNGVTFTTLIDGQCK---HGKIDLALRNFEIMKDRG---IRPDL----------- 366
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
I +N L +GL D+ KE LL EM G
Sbjct: 367 --------------ITYNALINGLCRDGDL---------------KEARKLL-NEMIGNG 396
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSL 387
F+ K +++ C K+GD++ A + R++E + AF + + G +
Sbjct: 397 FKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAE 456
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
+ ++M P Y +I+ CK + ++ L+KE G P + +Y L N +
Sbjct: 457 RMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGF 516
Query: 448 LNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLE 479
G + L + PN + I L+
Sbjct: 517 CKQGQMKNAKMLLHAMLNMEVVPNDITFNILLD 549
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 72/175 (41%), Gaps = 4/175 (2%)
Query: 362 DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
D G P +++ M + KIG+ M + +F E+ R SV +++ +I C+++ E
Sbjct: 219 DYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVE 278
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE-CLEKCRPNRTIYGIYL 478
L + P + +Y L N + + F E C PN + +
Sbjct: 279 EGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLI 338
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ G I+ A F M D+ I + + N +++ GD +A K+ + M
Sbjct: 339 DGQCKHGKIDLALRNFEIM-KDRGIRPDLITYNALINGLCRDGDLKEARKLLNEM 392
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 93/462 (20%), Positives = 178/462 (38%), Gaps = 60/462 (12%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ ++ G P+ +T L+ Y + + EA ++ ++M + GYQP N+L
Sbjct: 138 VLGKMMKLGYEPNIVTLSSLLNGYCHSKR---ISEAVALVDQMF-VTGYQPNTVTFNTLI 193
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L +A + ++ G Q D+ + + ++ D + +L
Sbjct: 194 HGLFLHNKA------SEAVALIDRMVAKG--CQPDLVTYGVVVNGLCKRGDTDLAFILLN 245
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAK 379
+M+Q E G + +++ K ++DA + + GI Y +
Sbjct: 246 KMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEM--ETKGIRPNVVTYSSLISCLCN 303
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
G + + + +M ER + V + +I+ K + E L E V+ + P + +
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 363
Query: 440 YINLTNMYLNLGMHDRLHLA---FSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
Y +L N + MHDRL A F + K C P+ Y ++ A +++ E+F
Sbjct: 364 YSSLINGFC---MHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFR 420
Query: 496 HMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLN 555
M +G NT + ++ +GD A++I+ M
Sbjct: 421 EMSQRGLVG-NTVTYTTLIQGLFQAGDCDMAQEIFKEM---------------------- 457
Query: 556 RKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLY 615
V V N+ + LL GLC + K ++ M+ F++ + S+M + Y Y
Sbjct: 458 ---VSDGVPPNIMTYNT------LLDGLC--KNGKLEKAMVVFEYLQRSKMEPTI--YTY 504
Query: 616 DQYHEWLHPSFKFWPKGRLVIPKLIHRWLTPRALAYWFMYGG 657
+ E + + K G + L + + P +AY M G
Sbjct: 505 NIMIEGMCKAGKV-EDGWDLFCNLSLKGVKPDVVAYNTMISG 545
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 130/315 (41%), Gaps = 23/315 (7%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D+I + P TF LI A++ +G L EA +Y+ M++ P ++SL
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVK---EGKLVEAEKLYDEMVKRS-IDPSIVTYSSLI 368
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L +A+ +F +++ YS LI +D E + L +
Sbjct: 369 NGFCMHD------RLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVD-EGMELFR- 420
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAK 379
EM Q G ++++ + GD + A++ + ++ +G+P Y ++ K
Sbjct: 421 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVS--DGVPPNIMTYNTLLDGLCK 478
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
G+ K++ +F +Q ++ Y+ +IE +CKA + E L G+KP + +
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 440 YINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
Y + + + G + F E E PN Y + + G+ E + E+ M
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Query: 499 S------DQTIGVNT 507
S TIG+ T
Sbjct: 599 SCGFAGDASTIGLVT 613
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 157/370 (42%), Gaps = 53/370 (14%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D ++ +G P +T+ +++ +G D A + N+M Q G +P ++ ++
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCK---RGDTDLAFILLNKMEQ-GKLEPGVLIYTTII 263
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI-WLHSYQDNIDKERISLLK 320
L ++ A +F + T G+ YS LI L +Y D R L
Sbjct: 264 DGLCKNK------HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR---LL 314
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES--DNGIPTPAFVY------ 372
+M + +++ KEG + +AEK + +++ D I T + +
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 373 -KMEAYAKIGEFMKS--------------------------LEIFREMQERLGSASVPAY 405
+++ ++ EFM S +E+FREM +R + Y
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE 465
+I+ L +A + ++ + + KE V G+ P + +Y L + G ++ + F E L+
Sbjct: 435 TTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQ 493
Query: 466 KCRPNRTI--YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
+ + TI Y I +E + AG +E ++F ++ S + + + + N ++S + G
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 524 VKAEKIYDLM 533
+A+ ++ M
Sbjct: 553 EEADALFKEM 562
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 146/348 (41%), Gaps = 27/348 (7%)
Query: 164 FRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIV 223
++ ++W+ Q T L + +G R+F + ++ ++ + F L
Sbjct: 3 YKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELAR 62
Query: 224 AYLSAPVQGCLDEACSIYNRMIQLGGYQP--RPSLHNSLFRALVSKPGGLSKYYLQQAEF 281
Y SA G L+++ RM G++ S +NSL A V K G Y Q+A
Sbjct: 63 GYASA---GLLEKSVEALKRM---EGHRCALTASAYNSLIDAFV-KAG-----YTQKALA 110
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
++ + SGL + D Y+ + +++++ + + L +EMQ ++
Sbjct: 111 VYRVMGQSGL--RPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDA 168
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGS 399
K G VE A K +L + G F Y ++ K G K+ +F EM
Sbjct: 169 VCKCGGVEKALKVFLDM--KSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLV 226
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
A+ Y+ +I L ++ + L +E + G L P ++ T++ LG+ R A
Sbjct: 227 ATRVVYNSLIHGLGRSGRADAAAKLFREMLSKG---LQPDHVTFTSLVYGLGVAGRASEA 283
Query: 460 ---FSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
F E + C + +Y + +++L + +++A EIF + D +
Sbjct: 284 RRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLV 331
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 144/372 (38%), Gaps = 49/372 (13%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
+M Q R D L + K ++ +F+++ NQ P+ +T+ ILI A
Sbjct: 114 VMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKC- 172
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
G +++A ++ M + G +P + S+ L K G ++ +A F+F + +
Sbjct: 173 --GGVEKALKVFLDM-KSRGCRPNIFTYTSMIDGL-GKSG-----HVDKAFFLFEEMTSE 223
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
GL + +Y+ LI H + + + L +EM G + S++ G
Sbjct: 224 GLVATRVVYNSLI--HGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRAS 281
Query: 350 DAEKTWL-------------------------RL---------LESDNGIP-TPAFVYKM 374
+A + + RL LE D +P F M
Sbjct: 282 EARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALM 341
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
+ K G + + +M+ + V Y+ +I+ L K+ E L+ E G +
Sbjct: 342 DGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYE 401
Query: 435 PLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEI 493
P + +Y L + G + D L L F E K N Y L L AG +++A ++
Sbjct: 402 PDVVTYNTLIDESCKGGRIEDALRL-FEEISAKGFANTVTYNTILNGLCMAGRVDEAYKL 460
Query: 494 FNHMHSDQTIGV 505
FN M + GV
Sbjct: 461 FNGMKQETVDGV 472
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 158/379 (41%), Gaps = 36/379 (9%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M +H + + L + K + + + +++ G VP TF+ +I+
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL---------------VSKP------- 268
++EA + NRM+ + G+ P + L L + KP
Sbjct: 303 ---INEAAKMVNRML-IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358
Query: 269 ---GGLSKYYLQQAEFIFHNLLTS-GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQ 324
G ++ L A+ + +++TS G+ Y+ LI+ + +++ + + +L +M+
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY-WKEGLVGLALEVLH-DMR 416
Query: 325 QAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEF 383
G + ++ K G +++A L + +D P T F + A+ K
Sbjct: 417 NKGCKPNVYSYTILVDGFCKLGKIDEAYNV-LNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 384 MKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINL 443
+++EIFREM + V ++ +I LC+ +E + L+++ + G+ +Y L
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 444 TNMYLNLGMHDRLHLAFSECLEKCRP-NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQT 502
N +L G +E + + P + Y ++ L AG ++KA +F M D
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 503 IGVNTRSCNIILSAYLSSG 521
N SCNI+++ SG
Sbjct: 596 APSNI-SCNILINGLCRSG 613
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 81/400 (20%), Positives = 149/400 (37%), Gaps = 41/400 (10%)
Query: 162 TGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHIL 221
T ++ W Q+ YR F + L +G +F + + ++G V E F +
Sbjct: 93 TSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISI 152
Query: 222 IVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK-------------- 267
+ Y A G + + M + +P +N + LVS
Sbjct: 153 MRDYDKAGFPG---QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 209
Query: 268 ----PGGLSKYYLQQAEFIFHNLLTSGLEIQKD-----------IYSGLIWLHSYQDNID 312
P L + + F N + S L + +D IY LI S + ++
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 269
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
E + LL +EM G E V+ K + +A K R+L + Y
Sbjct: 270 -EALQLL-EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET- 431
M KIG + ++F R+ + ++ +I + ++++ + V +
Sbjct: 328 LMNGLCKIGRVDAAKDLFY----RIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKA 490
G+ P + +Y +L Y G+ + K C+PN Y I ++ G I++A
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 491 EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+ N M +D + NT N ++SA+ +A +I+
Sbjct: 444 YNVLNEMSADG-LKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 128/300 (42%), Gaps = 15/300 (5%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L D K K + ++ +++ G P+ + F+ LI A+ + + EA I+
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK---EHRIPEAVEIFRE 484
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
M + G +P ++ F +L+S GL + ++ A ++ ++++ G+ Y+ LI
Sbjct: 485 MPRKGC---KPDVYT--FNSLIS---GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+ I + R L EM G + S+++ + G+V+ A + ++L
Sbjct: 537 NAFLRRGEIKEAR--KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+ + + + G +++E +EM R + + ++ +I LC+A E
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESL 481
++ ++ G+ P ++ L + G L E +E PN + I L+S+
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 19/260 (7%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D ++ + +F+++ QG P+ +T++ LI S G LDEA + ++M
Sbjct: 305 LIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCS---NGKLDEALGLQDKMS 361
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ G +P +N+L G K L++A + ++ GL ++ LI +
Sbjct: 362 GM-GLKPNVVTYNALIN------GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY 414
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+D LL+ M G ++ +EG+V++A K + NG+
Sbjct: 415 GKAGRMDDA--FLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEM--EGNGL 470
Query: 366 PTPAFVYKM--EAYAKIGEFMKSLEIFREM--QERLG-SASVPAYHKIIELLCKAEETEL 420
Y + +A K GE K++ + EM E+ G A++ Y+ +I+ C + E
Sbjct: 471 KADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEE 530
Query: 421 TESLMKEFVETGMKPLMPSY 440
L+ E +E G+ P +Y
Sbjct: 531 ANRLLNEMLEKGLIPNRTTY 550
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 135/323 (41%), Gaps = 29/323 (8%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM- 244
+ D K K K + +++ + P+E+TF+ILI + C DE + ++
Sbjct: 270 IIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGF-------CRDENVTAAKKVF 322
Query: 245 --IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
+Q G QP +NSL L S L +A + + GL+ Y+ LI
Sbjct: 323 EEMQRQGLQPNVVTYNSLINGLCSNG------KLDEALGLQDKMSGMGLKPNVVTYNALI 376
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+ + + R L ++ + G +++ K G ++DA LR + D
Sbjct: 377 NGFCKKKMLKEAREML--DDIGKRGLAPNVITFNTLIDAYGKAGRMDDA--FLLRSMMLD 432
Query: 363 NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
G+ Y + + + G ++ ++ +EM+ A + Y+ +++ LCK ET
Sbjct: 433 TGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRK 492
Query: 421 TESLMKEFV---ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGI 476
L+ E + G + + +Y L + N G + + +E LEK PNRT Y I
Sbjct: 493 AVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI 552
Query: 477 YLESLKNAGNIEKAEEIFNHMHS 499
+ + G I +I H+++
Sbjct: 553 LRDEMMEKGFI---PDIDGHLYN 572
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 76/191 (39%), Gaps = 35/191 (18%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
KEG + E + ++ G+ F + K+G+F K+ ++ +M+ S SV
Sbjct: 205 VKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSV 264
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
Y+ II+ CKA + ++L+KE V R+H
Sbjct: 265 ITYNTIIDGYCKAGKMFKADALLKEMVA-----------------------KRIH----- 296
Query: 463 CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
PN + I ++ N+ A+++F M Q + N + N +++ S+G
Sbjct: 297 ------PNEITFNILIDGFCRDENVTAAKKVFEEMQR-QGLQPNVVTYNSLINGLCSNGK 349
Query: 523 FVKAEKIYDLM 533
+A + D M
Sbjct: 350 LDEALGLQDKM 360
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 137/323 (42%), Gaps = 21/323 (6%)
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL 271
VP+E T+ +L+ AY +A G L A + + M + G P +++N+ L L
Sbjct: 11 VPTEDTYALLLRAYCTA---GSLHRAEGVISEMRE-HGIPPSATVYNAYLDGL------L 60
Query: 272 SKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK--KEMQQAGFE 329
++A ++ + + Y+ +I ++ K+ +S +K KEMQ G +
Sbjct: 61 KARCAEKAVEVYQRMKRERCRTNTETYTLMINVYGK----SKQPMSAMKVFKEMQSIGCK 116
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEI 389
+++ A+EG E AE+ + + ++ + A+ MEAY++ G + EI
Sbjct: 117 ANICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEI 176
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
F MQ +Y+ +++ +A E++ + GM P M S++ L +
Sbjct: 177 FSLMQHMGCEPDRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHAR 236
Query: 450 LGMHDRLHLAFSECLEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
G R ++ L K P+ L + AG ++ E + M T V T
Sbjct: 237 SGNVARCEEVMAQ-LHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAMERRGTRDVGT 295
Query: 508 RSCNIILSAYLSSGDFVKAEKIY 530
N+ ++AY +G + E +
Sbjct: 296 Y--NVAVNAYGRAGYLERMEAAF 316
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 2/197 (1%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
++RV G V DA +L + +EA + F +++ + EM+ +
Sbjct: 149 LIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKG 208
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
+ ++ Y+ II +C+ + L+ G +P SY L D +
Sbjct: 209 CTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVE 268
Query: 458 LAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F+E +EK C PN + + + G +E+A ++ M ++ NT CNI++++
Sbjct: 269 ELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQM-TEHGCATNTTLCNIVINS 327
Query: 517 YLSSGDFVKAEKIYDLM 533
G A K+ + M
Sbjct: 328 ICKQGRVDDAFKLLNDM 344
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 121/313 (38%), Gaps = 15/313 (4%)
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G + +A S+ + M++ G QP + L A+ G +QA + + G
Sbjct: 156 RGRVADALSLLDDMLRRG-CQPNVVTYTVLLEAMCRNSG------FEQAMAVLDEMRAKG 208
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
Y+ +I + +D R LL + + GF+ ++L+ +D
Sbjct: 209 CTPNIVTYNVIINGMCREGRVDDAR-ELLNR-LPSYGFQPDTVSYTTLLKGLCASKRWDD 266
Query: 351 AEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
E+ + ++E N +P F + + + G +++++ +M E + + + +I
Sbjct: 267 VEELFAEMMEK-NCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVI 325
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCR 468
+CK + L+ + G P SY + D +E + C
Sbjct: 326 NSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCP 385
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHS-DQTIGVNTRSCNIILSAYLSSGDFVKAE 527
PN + ++ L G IE+A + M T+GV T N +++ + G A
Sbjct: 386 PNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTY--NALVNGFCVQGHIDSAL 443
Query: 528 KIYDLMCLKKYEI 540
+++ M K I
Sbjct: 444 ELFRSMPCKPNTI 456
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 167/373 (44%), Gaps = 59/373 (15%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D ++ +G P +T+ +++ +G D A ++ N+M Q G +P ++N++
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCK---RGDTDLAFNLLNKMEQ-GKLEPGVLIYNTII 58
Query: 262 RALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLI-WLHSYQDNIDKERI--S 317
GL KY ++ A +F + T G+ YS LI L +Y D R+
Sbjct: 59 D-------GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 111
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES--DNGIPTPAFVY--- 372
++++++ F +++ KEG + +AEK + +++ D I T + +
Sbjct: 112 MIERKINPDVF-----TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 166
Query: 373 ----KMEAYAKIGEFMKS--------------------------LEIFREMQERLGSASV 402
+++ ++ EFM S +E+FREM +R +
Sbjct: 167 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 226
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
Y+ +I+ L +A + ++ + + KE V G+ P + +Y L + G ++ + F E
Sbjct: 227 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF-E 285
Query: 463 CLEKCRPNRTI--YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSS 520
L++ + TI Y I +E + AG +E ++F ++ S + + + + N ++S +
Sbjct: 286 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRK 344
Query: 521 GDFVKAEKIYDLM 533
G +A+ ++ M
Sbjct: 345 GSKEEADALFKEM 357
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 127/302 (42%), Gaps = 19/302 (6%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D+I + P TF LI A++ +G L EA +Y+ M++ P ++SL
Sbjct: 108 LLSDMIERKINPDVFTFSALIDAFVK---EGKLVEAEKLYDEMVKRS-IDPSIVTYSSLI 163
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L +A+ +F +++ Y+ LI ++ E + + +
Sbjct: 164 NGFCMHD------RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE-EGMEVFR- 215
Query: 322 EMQQAGFEEGKEVLLSVL-RVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
EM Q G G V ++L + + GD + A++ + ++ +G+P Y ++
Sbjct: 216 EMSQRGLV-GNTVTYNILIQGLFQAGDCDMAQEIFKEMVS--DGVPPNIMTYNTLLDGLC 272
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
K G+ K++ +F +Q ++ Y+ +IE +CKA + E L G+KP +
Sbjct: 273 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 332
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+Y + + + G + F E E PN Y + + G+ E + E+ M
Sbjct: 333 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 392
Query: 498 HS 499
S
Sbjct: 393 RS 394
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 131/307 (42%), Gaps = 13/307 (4%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
LD+A S +NRM+ + P PS + F L++ +Y F N + S I
Sbjct: 50 LDDALSSFNRMLHM---HPPPSTVD--FNRLLTSIAKTKQY---PTVFSLSNQMDS-FGI 100
Query: 294 QKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
D+Y+ I ++S+ N S+L K ++ G + +++R EG + DA
Sbjct: 101 PPDVYTLNILINSFCHLNRLGFAFSVLAKILK-LGHQPDTATFTTLIRGLCVEGKIGDAL 159
Query: 353 KTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+ +++ + + K+G ++ + R M++ V Y II+ L
Sbjct: 160 HLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSL 219
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNR 471
CK + +L + V G+ P + +Y +L + NL + ++ + K P+
Sbjct: 220 CKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDV 279
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
I+ +++L G I +A ++ + M + + N + N ++ + + +A K++D
Sbjct: 280 VIFSTVVDALCKEGKITEAHDVVD-MMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFD 338
Query: 532 LMCLKKY 538
M Y
Sbjct: 339 TMVHNGY 345
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 72/375 (19%), Positives = 150/375 (40%), Gaps = 21/375 (5%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+Q + D + T + D + K+R+ + ++F ++ QG P T+ LI + +
Sbjct: 200 MEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNL-- 257
Query: 231 QGC-LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
C ++ N+MI P + +++ AL K G ++ +A + ++
Sbjct: 258 --CEWKHVTTLLNQMIN-SKIMPDVVIFSTVVDAL-CKEGKIT-----EAHDVVDMMIIR 308
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
G+E Y+ L+ H Q +D E + + M G+ +++ K ++
Sbjct: 309 GVEPNVVTYNALMDGHCLQSEMD-EAVKVFDT-MVHNGYAPNVISYNTLINGYCKIQRMD 366
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
A + + + + IP + +G ++ +F EM + Y ++
Sbjct: 367 KATYLFEEMCQKE-LIPNTVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILL 425
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CR 468
+ LCK + +L+K + M P + Y + + G + FS K R
Sbjct: 426 DYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLR 485
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC--NIILSAYLSSGDFVKA 526
PN Y I + L G +++A ++F M + G + C N I L + + ++A
Sbjct: 486 PNVRTYTIMINGLCRRGLLDEANKLFMEMDGN---GCSPDGCTYNTITQGLLQNKEALRA 542
Query: 527 EKIYDLMCLKKYEIE 541
++ M + + +
Sbjct: 543 IQLLQEMLARGFSAD 557
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 61/315 (19%), Positives = 125/315 (39%), Gaps = 69/315 (21%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D + + + D + KE K + D+ D +I +G P+ +T++ L+ + +Q +DEA
Sbjct: 278 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHC---LQSEMDEAV 334
Query: 239 SIYNRMIQLGGYQPRPSLHNSL----------------FRALVSK---PGGLSKYYL--- 276
+++ M+ GY P +N+L F + K P ++ L
Sbjct: 335 KVFDTMVH-NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX 393
Query: 277 ------QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE 330
Q A +FH ++ G Y L+ + ++D E ++LLK ++ + +
Sbjct: 394 CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLD-EAMALLKT-IEGSNMDP 451
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRL-------------------------------- 358
++ V+ + G++E A + L
Sbjct: 452 DIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLF 511
Query: 359 LESD-NGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
+E D NG Y + + E ++++++ +EM R SA V ++E+LC
Sbjct: 512 MEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDD 571
Query: 416 EETELTESLMKEFVE 430
+ + + ++ EFV+
Sbjct: 572 KLDQSVKQILSEFVQ 586
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Query: 379 KIGEFMKSLEIFREMQERLGSA--SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
KIG+ +++E+F M+ER V Y I+ C + E +++ V G+KP
Sbjct: 163 KIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPN 222
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ +Y +L Y + GMH R LA ++K RP+ Y L + + EKA E+F
Sbjct: 223 IVAYNSLLGAYASRGMH-REALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVF 281
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSG 521
N M + + N S N ++ AY S+G
Sbjct: 282 NKMKKN-SCKPNKVSYNALIDAYGSAG 307
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 141/349 (40%), Gaps = 65/349 (18%)
Query: 199 CRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN 258
C+ IFD ++ +G P+ + ++ L+ AY S +G EA +I+N +I+ G +P +
Sbjct: 207 CKAIFDLMVAEGVKPNIVAYNSLLGAYAS---RGMHREALAIFN-LIKKNGLRPDIVSYT 262
Query: 259 SLFRAL--VSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERI 316
SL A ++P ++A +F+ + + + K Y+ LI + + KE +
Sbjct: 263 SLLNAYGRSAQP--------EKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGML-KEAV 313
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKE------------------------------- 345
LL EM++ G + + ++L C +
Sbjct: 314 GLLH-EMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKS 372
Query: 346 ----GDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSAS 401
GD E A + + + ES+ + + +K+G++ +SL F +M + S++
Sbjct: 373 YLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSST 432
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
K E E T S MK ++G P + +Y L Y G R F
Sbjct: 433 KEG---------KLSEAESTFSSMK---KSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFK 480
Query: 462 EC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
E + P+ I +E+ G E+ ++ M ++I +N +S
Sbjct: 481 EMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKK-KSIPLNQKS 528
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 187/454 (41%), Gaps = 75/454 (16%)
Query: 156 RIRENETGFRVYEWMMQQ---HWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQG-R 211
RI++ E G ++++W+ + ++ FA ++ L + + R F + D+ ++ N+ +
Sbjct: 73 RIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLK-LLARYRIFNEIEDVLGNLRNENVK 131
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVS--KPG 269
+ E H+L AY + G L +A IY+ +++L P NSL LV + G
Sbjct: 132 LTHEALSHVL-HAYAES---GSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLG 187
Query: 270 GLSKYYLQQAE-----------FIFHNLLTSG-LEIQKDIYSGLIWLHSYQDNI------ 311
K Y + + + + G +E+ + + G W NI
Sbjct: 188 DARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGR-WGKGCIPNIVFYNTI 246
Query: 312 --------DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD- 362
D E L+ KE++ GF E +++ KEGD +++ + E
Sbjct: 247 IGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGL 306
Query: 363 -------NGIPTPAFV--YKMEAYAKIGEFMKS----------LEIFREMQER------- 396
N I + YK++ IG + + + I R +E
Sbjct: 307 RVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVG 366
Query: 397 -LGSAS----VP---AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY-INLTNMY 447
L AS +P +Y +I+ CK++E ++ L+ + E G KP + +Y I + +
Sbjct: 367 FLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLV 426
Query: 448 LNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
++ M D +++ P+ IY + + L G A+ +F+ M D+ I +
Sbjct: 427 VSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEML-DRNILPDA 485
Query: 508 RSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIE 541
++ ++ SGDF +A K++ L K +++
Sbjct: 486 YVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 129/304 (42%), Gaps = 34/304 (11%)
Query: 209 QGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKP 268
+G P +T+ ILI + V G +D+A ++ ++I G P +++N L L
Sbjct: 409 RGCKPDIVTYGILIHGLV---VSGHMDDAVNMKVKLIDRG-VSPDAAIYNMLMSGLCKTG 464
Query: 269 GGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
L A+ +F +L + +Y+ LI + D+ R ++
Sbjct: 465 RFLP------AKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR------KVFSLSV 512
Query: 329 EEGKEVLL----SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGE 382
E+G +V + ++++ + G +++A R+ E ++ +P F Y ++ Y K +
Sbjct: 513 EKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNE-EHLVPD-KFTYSTIIDGYVKQQD 570
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
+++IFR M++ +V Y +I C + ++ E KE ++ L+P+ +
Sbjct: 571 MATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEM---QLRDLVPNVVT 627
Query: 443 LTNMYLNLGMHDRL---HLAFSECL--EKCRPNRTIYGIYLESL--KNAGNIEKAEEIFN 495
T + +L + + E + KC PN + L+ K +G + + N
Sbjct: 628 YTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSN 687
Query: 496 HMHS 499
H S
Sbjct: 688 HGQS 691
>gi|357144696|ref|XP_003573383.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Brachypodium distachyon]
Length = 606
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 167/395 (42%), Gaps = 67/395 (16%)
Query: 166 VYEWMMQQHWYRF---DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
+ EW+ QHW+ F DF + L GK F++ + + +G P+ ++ L+
Sbjct: 127 ILEWLRTQHWWDFSEMDFLM---LVTAYGKLGDFSRAERVLKYMNKKGYRPTVISQTALM 183
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
AY A +A ++++RM Q G +P P + + ++LV KY ++AE I
Sbjct: 184 EAYGRAK---QYRKAEAVFHRM-QTSGPEPSPITYQIILKSLVEG----DKY--KEAEAI 233
Query: 283 FHNLLT---SGLEIQKDIYSGLIWLHSYQDNIDKER------------------------ 315
F +LL+ + + + ++ +I+++ + + R
Sbjct: 234 FEDLLSEKRTFFKPDQKMFHMMIYMYKKSGDYAQARKLFAQMSERGIPQSTVTFNSLMSF 293
Query: 316 ------ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI-PT- 367
+S + +MQ+AG + +++ K E+A + +L D GI PT
Sbjct: 294 EGDYKEVSSIYDQMQRAGLKPDVVSYSLLIKAYGKARREEEASAVFEEML--DAGIRPTR 351
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
++ ++A+A G ++ +F+ M+ + +Y ++ A + + E +
Sbjct: 352 KSYNILLDAFAISGLVEEAQTVFKTMRRHRVEPDLCSYTTMLLAYVNASDMDGAEKFFRR 411
Query: 428 FVETGMKP-------LMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLES 480
E G++P LM Y L N+ + +++R+ ++ PN+TI+ ++
Sbjct: 412 IKEDGLRPNVVVYGTLMKGYSKLDNVEKVMRVYERMR------MQGVEPNQTIFTTIMDV 465
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILS 515
+ A FN M + + + ++ NI+LS
Sbjct: 466 HGRNSDFGNAVIWFNEMET-RGYPPDKKAKNILLS 499
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/389 (19%), Positives = 156/389 (40%), Gaps = 19/389 (4%)
Query: 172 QQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQ 231
Q+ +R D + + + KE + ++ +D+ ++++++G P ++ + +V
Sbjct: 410 QEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCR--L 467
Query: 232 GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK---YYLQQAEFIFHNLLT 288
G +D+A + +++ G++P + +L + L + + + N +T
Sbjct: 468 GEVDKAKKLL-QVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSIT 526
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
YS + +H + + +EM GF G + +L+ ++G
Sbjct: 527 ---------YS--VIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRT 575
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
+A K L I F + + + E +L + +M A V Y +
Sbjct: 576 HEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTL 635
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR 468
++ L K LMK+ + G+ P +Y + + Y +G D L +A E + +
Sbjct: 636 VDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDL-VAILEKMISRQ 694
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
RTIY +E L G +E+A+ + + + + ++C ++ YL G + A K
Sbjct: 695 KCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRS-DAKTCYALMEGYLKKGVPLSAYK 753
Query: 529 IYDLMCLKKYEIESAWMEKLDYVLSLNRK 557
+ M + + EKL L L K
Sbjct: 754 VACRMFNRNLIPDVKMCEKLSKRLVLKGK 782
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 10/217 (4%)
Query: 323 MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN--GIPTPAFVYK--MEAYA 378
MQ+AG E + + + V + +E A LR LE GI Y + Y
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKA----LRFLERMQVVGIVPNVVTYNCMIRGYC 323
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV-ETGMKPLM 437
+ +++E+ +M + +Y+ I+ LCK + LMK+ E G+ P
Sbjct: 324 DLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQ 383
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+Y L +M D + EK R ++ Y + +L G + +A+++ N
Sbjct: 384 VTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINE 443
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M S + + +++ + G+ KA+K+ +M
Sbjct: 444 MLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
>gi|168052517|ref|XP_001778696.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669911|gb|EDQ56489.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 799
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 146/358 (40%), Gaps = 15/358 (4%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGR--VPSEMTFHILIVAYLSAPVQGCLDE 236
D L + G+ ++ IFDD++ + PS +++ LI A S+ G +
Sbjct: 121 DVETYNALMNVHGRAGQWRWALQIFDDMLQAPKPIAPSRSSYNNLINACGSS---GQWFK 177
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
A I RM G P +N + A K GG ++ + + + +
Sbjct: 178 ALEICKRMTD-NGVGPDLMTYNIILSAF--KSGGQPRHAVAYYDHLISKKVPLDRYSHNI 234
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
I + L L ++D I+ L K+ + G E ++L V A G + A++T+
Sbjct: 235 ILNCLTKLGRFEDAIN-----LFKEMRKMNGCEPDVVTFNALLHVYALCGQITKAQETFD 289
Query: 357 RLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
++ F + AYA G + ++L++ + + V +Y ++ KA
Sbjct: 290 MMIGEGMAPTIVTFNTLLGAYASQGMYTEALQVVGLLVKAKFEPDVVSYSSLLNAFGKAG 349
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYG 475
E + + + KP + ++ L + Y + G ++R + E + PN
Sbjct: 350 YPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARELLHDMAEARIEPNVVTIC 409
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ A EK ++F H + I +N + N ++AY+ +G F +A+ + ++M
Sbjct: 410 SLFAACARARCPEKVRDVF-HEAKVRQIALNVPAFNAAITAYIEAGQFDEAKALLEVM 466
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 116/281 (41%), Gaps = 13/281 (4%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
+ K ++ FD +I +G P+ +TF+ L+ AY S QG EA + +++ ++P
Sbjct: 280 QITKAQETFDMMIGEGMAPTIVTFNTLLGAYAS---QGMYTEALQVVGLLVK-AKFEPDV 335
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
++SL A K G Y ++A+ +F + + ++GL + +Y E
Sbjct: 336 VSYSSLLNAF-GKAG-----YPEKAQEVFDLMKQRSRKPNLVTFNGL--MDAYASAGKYE 387
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM 374
R L +M +A E + S+ CA+ E + + PAF +
Sbjct: 388 RARELLHDMAEARIEPNVVTICSLFAACARARCPEKVRDVFHEAKVRQIALNVPAFNAAI 447
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
AY + G+F ++ + M+E+ + + +I + +L + V+ G+
Sbjct: 448 TAYIEAGQFDEAKALLEVMEEQNLRPNGVTFLLLINAAGSLGDYREARTLYDKMVDLGIP 507
Query: 435 PLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIY 474
+ L N + GM++ F + + C+ N Y
Sbjct: 508 LTVEPCSALINAFAKHGMYNEARTIFDDMRKAGCKANVVTY 548
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 116/287 (40%), Gaps = 22/287 (7%)
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
+ DIY+ +IWLH+ D+ R L EM+ + E +++ V + G A +
Sbjct: 86 RTDIYNCMIWLHARHQRADQARG--LFYEMKVWRCKPDVETYNALMNVHGRAGQWRWALQ 143
Query: 354 TWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
+ +L++ I Y + A G++ K+LEI + M + + Y+ I+
Sbjct: 144 IFDDMLQAPKPIAPSRSSYNNLINACGSSGQWFKALEICKRMTDNGVGPDLMTYNIILSA 203
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSEC--LEKCR 468
+ + + + S+ + N LG D ++L F E + C
Sbjct: 204 FKSGGQPRHAVAYYDHLISKKVPLDRYSHNIILNCLTKLGRFEDAINL-FKEMRKMNGCE 262
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
P+ + L G I KA+E F+ M + + + N +L AY S G + +A +
Sbjct: 263 PDVVTFNALLHVYALCGQITKAQETFDMMIG-EGMAPTIVTFNTLLGAYASQGMYTEALQ 321
Query: 529 IYDLMCLKKYEIE-------------SAWMEKLDYVLSLNRKEVKKP 562
+ L+ K+E + + + EK V L ++ +KP
Sbjct: 322 VVGLLVKAKFEPDVVSYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKP 368
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 12/214 (5%)
Query: 332 KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFR 391
+EV+ VL + E D++ WL N PA + ++ + G SL +F
Sbjct: 23 REVVSRVLALNHWE-DIDGVLNCWLGRFNRKN---FPALISEI---TRTGALEHSLRVFN 75
Query: 392 EMQ-ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
M+ ++ A Y+ +I L + + + L E KP + +Y L N++
Sbjct: 76 WMKNQKCYRARTDIYNCMIWLHARHQRADQARGLFYEMKVWRCKPDVETYNALMNVHGRA 135
Query: 451 GMHDRLHLAFSECLEKCRP---NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
G F + L+ +P +R+ Y + + ++G KA EI M +D +G +
Sbjct: 136 GQWRWALQIFDDMLQAPKPIAPSRSSYNNLINACGSSGQWFKALEICKRM-TDNGVGPDL 194
Query: 508 RSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIE 541
+ NIILSA+ S G A YD + KK ++
Sbjct: 195 MTYNIILSAFKSGGQPRHAVAYYDHLISKKVPLD 228
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 126/295 (42%), Gaps = 14/295 (4%)
Query: 240 IYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYS 299
++ M G P + +N+L RAL + L+ A+ ++ SG ++
Sbjct: 115 LFAHMYHHGPPAPTGATYNALIRALCRRAD------LRHAQRYLSLMVRSGWRPDAFTFN 168
Query: 300 GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
LI + +D + L +M GF + +++ + G V++A + + L
Sbjct: 169 SLILGYCRTQQLDVAQD--LFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE 226
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
+ D + T A + K A+ GE + L + ++M+E + AY +++L C+ ++ E
Sbjct: 227 QPD--MYTHAALVKGLCDARRGE--EGLYMLQKMKELGWRPATRAYAALVDLWCREQKAE 282
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYL 478
E ++ E + G+ P + + N Y G M + + S L+ C PN Y +
Sbjct: 283 EAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMV 342
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ N G + KA + + M + + + + N+++ G A ++ LM
Sbjct: 343 QGFCNVGKVYKAMALLDQMR-ECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLM 396
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 142/367 (38%), Gaps = 19/367 (5%)
Query: 158 RENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMT 217
R E G + + M + W A A L D +E+K + + +++ + G VP +T
Sbjct: 244 RRGEEGLYMLQKMKELGWRPATRAYAA-LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVT 302
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
++ AY +G + A ++ M +L G +P +N++ + + + K Y
Sbjct: 303 CTAVVNAYCR---EGRMSGAVRVFESM-KLKGCEPNVWTYNAMVQGFCN----VGKVY-- 352
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
+A + + G+E Y+ LI +I E L + M+ G +
Sbjct: 353 KAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHI--ESAFRLLRLMEGNGLAADQYTYNV 410
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
++ K G V++A + L + F + K G+F + +M
Sbjct: 411 LIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAG 470
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL---NLGMHD 454
+ Y IE LCK + + S + E ++ +KP +Y + + N G+
Sbjct: 471 CAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLAT 530
Query: 455 RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
R+ C P+ Y + + N G + +AE + M I V+ + N ++
Sbjct: 531 RIWGQMVSL--GCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGII-VDAMAYNTLI 587
Query: 515 SAYLSSG 521
+ S G
Sbjct: 588 DGHTSIG 594
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 156/401 (38%), Gaps = 49/401 (12%)
Query: 156 RIRENETGFRVY-EWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
RI E E+ FR M + Y ++ + D K K +++ +++ G +P+
Sbjct: 243 RISEAESMFRTMRNSGMLPNLYTYN-----TMMDGYCKIAHVKKALELYQEMLGDGLLPN 297
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSL--HNSLFRALVSKPGGLS 272
+TF ILI DE S +I + + P++ +N L K G LS
Sbjct: 298 VVTFGILIDGLCKT------DEMVSARKFLIDMASFGVVPNIFVYNCLIDGY-CKAGNLS 350
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ +E H EI D+++ I + E L +EM++ GF
Sbjct: 351 EALSLHSEIEKH-------EILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
+++ KEG++E A + ++ E F ++ Y K G+ ++ ++ E
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
M + V AY +I+ K T+ L KE E G L P+ L+ + L
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG---LHPNVFTLSCLIDGLCK 520
Query: 453 HDRLHLAFSECLEK-----------------CRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
R+ A L K C PN +Y ++ L G I KA + F+
Sbjct: 521 DGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFS 580
Query: 496 HMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
M + + +C +I+ + +A + D+M L+
Sbjct: 581 DMRC-SGLRPDVFTCIVIIQGHF------RAMHLRDVMMLQ 614
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 138/330 (41%), Gaps = 21/330 (6%)
Query: 175 WYRFDFALATK----LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
+Y+ D A + + D + K+ +F ++ D++ +G P+ +T+ LI
Sbjct: 149 YYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCR--- 205
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
QG +A +++ MI+ + P ++ L R L + + +AE +F + SG
Sbjct: 206 QGDFLKAFRLFDEMIEKKIF-PTVVIYTILIRGLCGES------RISEAESMFRTMRNSG 258
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ ++Y+ + Y ++ L +EM G ++ K ++
Sbjct: 259 M--LPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVS 316
Query: 351 AEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
A K + + + G+ FVY ++ Y K G ++L + E+++ V Y +
Sbjct: 317 ARKFLIDM--ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-C 467
I+ LC + E + L++E + G P +Y L + Y G ++ S+ EK
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
PN + ++ AG +E A ++ M
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 134/309 (43%), Gaps = 17/309 (5%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
LD+A S +NR++ + P PS+ + F L++ + Y + + + +
Sbjct: 46 LDDALSSFNRLLHM---HPPPSIVD--FAKLLTSIAKMKHY----STVLSLSTQMDSFGV 96
Query: 294 QKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
++Y+ I ++S+ N S+L K + + G + +++R EG + +A
Sbjct: 97 PPNVYTLNILINSFCHLNRVGFAFSVLAK-ILKLGHQPDPTTFTTLIRGLCVEGKIGEAL 155
Query: 353 KTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
+ +++ D G Y + K+G ++ + R M++ V Y II+
Sbjct: 156 HLFDKMI--DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 213
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRP 469
LCK + +L + V G+ P + +Y +L + NL + ++ + K P
Sbjct: 214 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 273
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
+ I+ +++L G + +A EI + M + + + + ++ + + +A K+
Sbjct: 274 DVVIFSTVVDALCKEGKVTEAHEIVD-MMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV 332
Query: 530 YDLMCLKKY 538
+D+M K +
Sbjct: 333 FDMMVRKGF 341
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/377 (18%), Positives = 153/377 (40%), Gaps = 16/377 (4%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+Q + D + T + D + K+R+ + ++F ++ QG P T+ L+ A +
Sbjct: 196 MEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNL-- 253
Query: 231 QGC-LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
C ++ N+M+ P + +++ AL K G ++ +A I ++
Sbjct: 254 --CEWKHVTTLLNQMVN-SKILPDVVIFSTVVDALC-KEGKVT-----EAHEIVDMMIQR 304
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
G+E Y+ L+ H Q +D E + + M + GF +++ K ++
Sbjct: 305 GVEPDVVTYTTLMDGHCLQSEMD-EAVKVFDM-MVRKGFAPDVISYTTLINGYCKIHKID 362
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
A + + + T + M +G ++ +F EM R + Y ++
Sbjct: 363 KAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 422
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CR 468
+ LCK E +L+K + + P + Y + + G + FS K
Sbjct: 423 DSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLH 482
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
P+ Y I + L G + +A ++F M + + + N I +L + + ++A +
Sbjct: 483 PSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDC-SPDGCTYNTIARGFLQNNETLRAIQ 541
Query: 529 IYDLMCLKKYEIESAWM 545
+ + M + + +S ++
Sbjct: 542 LLEEMLARGFSADSCFL 558
>gi|334187332|ref|NP_001190970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332661695|gb|AEE87095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/367 (19%), Positives = 138/367 (37%), Gaps = 81/367 (22%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
V+ WM +Q WY D + +KL MGK+ + +F ++ N G P ++ LI A+
Sbjct: 119 VFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAH 178
Query: 226 LSAPVQG-CLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
L + L++ ++M + QP +N L RA + Q +F
Sbjct: 179 LHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGK------VDQVNALFK 232
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
+L S + D+Y+ V+ K
Sbjct: 233 DLDMS--PVSPDVYT-----------------------------------FNGVMDAYGK 255
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
G +++ E R+ ++ F +++Y K EF K + F+ + ++P
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
++ +I KA + E + K+ + +PS+I M +
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMN---YIPSFITYECMIM---------------- 356
Query: 465 EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM-HSDQTIGVNTRSCNIILSAYLSSGDF 523
+YG G++ +A EIF + SD+ + +T N +L Y +G +
Sbjct: 357 --------MYGY-------CGSVSRAREIFEEVGESDRVLKAST--LNAMLEVYCRNGLY 399
Query: 524 VKAEKIY 530
++A+K++
Sbjct: 400 IEADKLF 406
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 8/166 (4%)
Query: 375 EAYAKIGEFMKSLEIFREMQ-ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
E K ++++ LE+FR MQ +R Y K+I ++ K +T + L E +G
Sbjct: 105 EELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGC 164
Query: 434 KPLMPSYINLTNMYLNLGMHD------RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNI 487
+P Y L +L+ R +L + +E+C+PN Y I L + +G +
Sbjct: 165 RPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKV 224
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++ +F + + + + N ++ AY +G + E + M
Sbjct: 225 DQVNALFKDLDM-SPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 136/314 (43%), Gaps = 21/314 (6%)
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL 271
VP+E T+ +L+ AY +A G L A + + M + G P +++N+ L L
Sbjct: 9 VPTEDTYALLLRAYCNA---GSLHRAEGVISEMRE-HGIPPNATVYNAYLDGL------L 58
Query: 272 SKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK--KEMQQAGFE 329
++A ++ + + ++ +I ++ K+ +S +K EM+ G +
Sbjct: 59 KARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKA----KQPMSSMKVFNEMKSIGCK 114
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEI 389
+++ A+EG E AE+ + + ++ + A+ MEAY++ G + EI
Sbjct: 115 PNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEI 174
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
F MQ +Y+ +++ +A E E++ +E + GM P M S++ L +
Sbjct: 175 FSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHAR 234
Query: 450 LGMHDRLHLAFSECLEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
G R ++ L K P+ L + AG ++ E +F M V T
Sbjct: 235 SGNATRCEEVMAQ-LHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRGDADVGT 293
Query: 508 RSCNIILSAYLSSG 521
N+ ++AY +G
Sbjct: 294 Y--NVAVNAYGRAG 305
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 8/182 (4%)
Query: 356 LRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCK 414
+ LLE+ +PT + + AY G ++ + EM+E + Y+ ++ L K
Sbjct: 1 MALLEAQC-VPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLK 59
Query: 415 AEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTI 473
A TE + + + ++ + N+Y F+E C+PN
Sbjct: 60 ARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICT 119
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIG--VNTRSCNIILSAYLSSGDFVKAEKIYD 531
Y + + G EKAEE+F M Q G + + N ++ AY +G A +I+
Sbjct: 120 YTALVNAFAREGLCEKAEEVFEEM---QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFS 176
Query: 532 LM 533
LM
Sbjct: 177 LM 178
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 150/348 (43%), Gaps = 24/348 (6%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K +F K + ++ + P +T ++++ A A G + A ++ + M+ G +
Sbjct: 168 KALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRA---GDAEAAMALVDSMVS-KGLK 223
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P +NS+ + L + G K A +F + G + D+ S I + +
Sbjct: 224 PGIVTYNSVLKGL-CRSGMWDK-----AWEVFKEMDDFG--VAPDVRSFTILIGGFCRVG 275
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
+ E + KEM+ G + ++ + A+ G ++ A +LR + +P +
Sbjct: 276 EIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHA-MAYLREMRCFGLVPD-GVI 333
Query: 372 YKM--EAYAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTESLMK 426
Y M + + G +L + EM +G +P Y+ ++ LCK E L+
Sbjct: 334 YTMVIGGFCRAGLMSDALRVRDEM---VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLN 390
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAG 485
E E G+ P + ++ L + Y G D+ F L ++ RP+ Y ++ + G
Sbjct: 391 EMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQG 450
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+++KA ++++ MHS + I N + +I++ ++ G A D M
Sbjct: 451 DLDKANDLWDDMHS-REIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 497
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 65/379 (17%), Positives = 156/379 (41%), Gaps = 15/379 (3%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R+ E E ++Y+ M + + D + L + K ++ G VP
Sbjct: 273 RVGEIEEALKIYKEM-RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG 331
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+ + ++I + A G + +A + + M+ G P +N+L L +
Sbjct: 332 VIYTMVIGGFCRA---GLMSDALRVRDEMVGCGCL-PDVVTYNTLLNGLCKE------RR 381
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
L AE + + + G+ ++ LI + + +DK + L + Q
Sbjct: 382 LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKA-LQLFDTMLNQR-LRPDIVTY 439
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
+++ ++GD++ A W + + + ++++ + G+ + EM
Sbjct: 440 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 499
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHD 454
+ ++ Y+ II+ C++ + +++ + + P + +Y L + Y+ MHD
Sbjct: 500 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHD 559
Query: 455 RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
L EK +P+ Y + + GN+++A IF M + + I + + ++
Sbjct: 560 AFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA-KGIEPDRYTYMSMI 618
Query: 515 SAYLSSGDFVKAEKIYDLM 533
+ ++++G+ +A +++D M
Sbjct: 619 NGHVTAGNSKEAFQLHDEM 637
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
A + + S++ + T + Y K EF K + EM++R V ++ +++
Sbjct: 140 AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 199
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRP 469
+A + E +L+ V G+KP + +Y ++ GM D+ F E + P
Sbjct: 200 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 259
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ + I + G IE+A +I+ M
Sbjct: 260 DVRSFTILIGGFCRVGEIEEALKIYKEM 287
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK--EGDVEDAEK 353
+ Y+ I +H+Y ++ +++ + EM++ +V+ + V A+ GD E A
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVF--PDVVTHNVMVDARFRAGDAEAA-- 210
Query: 354 TWLRLLES--DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
+ L++S G+ Y ++ + G + K+ E+F+EM + + V ++ +I
Sbjct: 211 --MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILI 268
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-- 467
C+ E E + KE G+KP + S+ L ++ G D E +C
Sbjct: 269 GGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLRE--MRCFG 326
Query: 468 -RPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
P+ IY + + AG + A + + M
Sbjct: 327 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 357
>gi|326532582|dbj|BAK05220.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 17/258 (6%)
Query: 196 FAKCRDI------FDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
+ KC I F ++ +G P+++T++IL+ AY S +Q + E S+ M LG
Sbjct: 388 YCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAY-SRRLQPEVVE--SLLLEMHDLG- 443
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
+QP +N L A G K ++AE F + G++ Y+ LI ++
Sbjct: 444 FQPNARSYNCLISAY-----GRQKKMSEKAEDAFLRMKKGGIKATSSSYTSLICAYAVSG 498
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
+K I+ L +M++ G + E ++L + + G+ E +TW + + G
Sbjct: 499 QYEKAHIAYL--DMKREGLKPSLETYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVT 556
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
F ++ AK G F+++ ++ E + + Y+ ++ K + L+KE
Sbjct: 557 FHMVLDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMS 616
Query: 430 ETGMKPLMPSYINLTNMY 447
+KP +Y L Y
Sbjct: 617 TLELKPDSVTYSTLIYAY 634
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 118/259 (45%), Gaps = 16/259 (6%)
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
F + G++ + + LI + + D K+ + + EM++ G + +++ V
Sbjct: 330 FFQRMNRKGVKWSLGVSASLIKI--FCDEGMKKEALIFQSEMEKRGIPSNTSIYNTIMNV 387
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAK--IGEFMKSLEIFREMQERL 397
K +E+AE + + E G+ Y M+AY++ E ++SL + EM +
Sbjct: 388 YCKCSQIEEAEGLFAEMKE--KGLKPTKVTYNILMDAYSRRLQPEVVESLLL--EMHDLG 443
Query: 398 GSASVPAYHKIIELLCKAEE-TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
+ +Y+ +I + ++ +E E + G+K SY +L Y G +++
Sbjct: 444 FQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKKGGIKATSSSYTSLICAYAVSGQYEKA 503
Query: 457 HLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILS 515
H+A+ + E +P+ Y L+ + AGN EK E + M +D+ +G + +++L
Sbjct: 504 HIAYLDMKREGLKPSLETYTALLDIFRRAGNTEKLMETWKSM-TDEKVGCTRVTFHMVLD 562
Query: 516 AYLSSGDFVKAEKIYDLMC 534
G FV+A D++C
Sbjct: 563 GLAKHGLFVQAR---DVIC 578
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 132/317 (41%), Gaps = 12/317 (3%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T+L +GK K + IF +++ +G P + + LI A G L +A ++
Sbjct: 304 TELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKA---GRLADAIKLFEE 360
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M L P +N++ +AL SK +A + + +G+ YS LI
Sbjct: 361 MESLQ-CTPNVVTYNTVIKALFE-----SKARASEAFLWYEKMKENGVVPSSFTYSILID 414
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ + E+ LL +EM + GF S++ K E A + + L E+
Sbjct: 415 GFCKTNRV--EKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCG 472
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
+ ++ K G +++++F EM++ + V AY+ ++ + + T+ S
Sbjct: 473 YSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHS 532
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLK 482
L++ E G P + S+ + N + G F+ K +P+ Y L L
Sbjct: 533 LLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLS 592
Query: 483 NAGNIEKAEEIFNHMHS 499
AG E+A ++ M+S
Sbjct: 593 RAGMFEEAAKLMKEMNS 609
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 362 DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
+NG+ A +Y + Y K+G K+L + +EM+E+ + +V Y ++I+ + KA + E
Sbjct: 258 ENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVE 317
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS--ECLE--KCRPNRTIYG 475
S+ ++ G KP + NL N+ LG RL A E +E +C PN Y
Sbjct: 318 EAYSIFMNMLKEGCKPDVVLINNLINL---LGKAGRLADAIKLFEEMESLQCTPNVVTYN 374
Query: 476 IYLESL 481
+++L
Sbjct: 375 TVIKAL 380
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 77/186 (41%), Gaps = 3/186 (1%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
S++ + +EG E + + + + +P T + + A+ K+G ++ +F EM+E
Sbjct: 199 SMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKE 258
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
+ Y I+ + K E L++E E G + +Y L G +
Sbjct: 259 NGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEE 318
Query: 456 LHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
+ F L E C+P+ + + L AG + A ++F M S Q N + N ++
Sbjct: 319 AYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTP-NVVTYNTVI 377
Query: 515 SAYLSS 520
A S
Sbjct: 378 KALFES 383
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 153/346 (44%), Gaps = 44/346 (12%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + K+ ++ + D++ +G VP+E+T++ L+ ++G LD+A S+ NRM+
Sbjct: 251 LISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLC---LKGKLDKAMSLLNRMV 307
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYL---------QQAEFIFHNLLTSGLEIQKD 296
P +L V L + + EF + +L++ + K
Sbjct: 308 A-NKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKG 366
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
+ +W KEM + G + V +++ +EG ++A++
Sbjct: 367 EHGMQLW-----------------KEMVEKGCKPNTIVYSALIDGLCREGKPDEAKE--- 406
Query: 357 RLLESDNGIPTP-AFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
L+E N TP +F Y M Y + G+ K++ +++EM + + Y +I LC
Sbjct: 407 YLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLC 466
Query: 414 KAEETELTESLM--KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL---EKCR 468
K +L E+L+ K+ + G+K + +Y ++ + + N + ++ F++ L K +
Sbjct: 467 K--NGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQ 524
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
P+ Y I L + ++ +A +I N M DQ + +C+I L
Sbjct: 525 PDVVTYNILLNAFCTKNSVSRAIDILNTM-LDQGCDPDFITCDIFL 569
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 78/175 (44%), Gaps = 11/175 (6%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESD-------NGIPTPAFVYKMEAYAKIGEFMKSLEI 389
+VL V +EG + A + + +++S+ NG+ +F ++A ++G +++E+
Sbjct: 141 TVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGL---SFNLVIKALCRVGNVDQAVEV 197
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
FR M +R A Y ++ LC + SL+ E G P ++ L +
Sbjct: 198 FRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCK 257
Query: 450 LGMHDRL-HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
G R L + L+ C PN Y + L G ++KA + N M +++ +
Sbjct: 258 KGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCV 312
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 111/272 (40%), Gaps = 14/272 (5%)
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G +DEA S+ + M Q+ G P P N L AL K G LS+ A + N+ G
Sbjct: 223 EGRIDEAVSLLDEM-QVEGTFPNPVAFNVLISALCKK-GDLSR-----ASKLVDNMFLKG 275
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ Y+ L+ + +DK +SLL + M +++ K G D
Sbjct: 276 CVPNEVTYNSLVHGLCLKGKLDKA-MSLLNR-MVANKCVPNDITFGTLVDGFVKHGRALD 333
Query: 351 AEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
+ + L E G F Y + K G+ +++++EM E+ + Y +
Sbjct: 334 GVRVLVSLEEK--GYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSAL 391
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-C 467
I+ LC+ + + + + E G P +Y +L Y G + L + E + C
Sbjct: 392 IDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDC 451
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+ Y I + L G +++A ++ M S
Sbjct: 452 NHHEVCYSILINGLCKNGKLKEALIVWKQMLS 483
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 77/174 (44%), Gaps = 7/174 (4%)
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREM-QERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
+F+ +AY K K+L++F M E +V +++ ++ ++ + +L
Sbjct: 102 SFIIMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNH 161
Query: 428 FVETG----MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLK 482
+++ ++P S+ + +G D+ F ++ C + Y + L
Sbjct: 162 VIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLC 221
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
N G I++A + + M + T N + N+++SA GD +A K+ D M LK
Sbjct: 222 NEGRIDEAVSLLDEMQVEGTFP-NPVAFNVLISALCKKGDLSRASKLVDNMFLK 274
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 14/250 (5%)
Query: 203 FDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFR 262
+ ++ +G P + F ILI A+ + + A ++N M L PS + F
Sbjct: 844 LEKMVLEGIFPDRLVFDILITAFSE---KSKMHNALQVFNCMKWL---HMSPS--SKTFS 895
Query: 263 ALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKE 322
A+++ G + K YL + + H +L GL+ Y L+ ID R LK+E
Sbjct: 896 AMIN--GLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEID--RAFRLKEE 951
Query: 323 MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIG 381
M+ G + S++R + G +E+A + ++ S +PT A F M + K
Sbjct: 952 MKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRS-GMVPTVATFTTLMHSLCKES 1010
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ +L + R M+ V +Y+ +I LCK + L E G+ P + +YI
Sbjct: 1011 KIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYI 1070
Query: 442 NLTNMYLNLG 451
LT + G
Sbjct: 1071 TLTGAMYSTG 1080
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 87/456 (19%), Positives = 182/456 (39%), Gaps = 35/456 (7%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP-VQGCLDEA 237
D + L + M + K + ++I + G +P+++ + LI Y A V+ L
Sbjct: 469 DVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHF 528
Query: 238 CSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI 297
IY R G P +HN+L A + G+ + +AE + +
Sbjct: 529 VDIYRR-----GLVANPVIHNALLHAFYRE--GM----ITEAEHFRQYMSRMNISFDSVS 577
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
++ +I + ++ NI + +M + G+ ++LR + G + A +
Sbjct: 578 FNRIIDSYCHRGNIVGA--FSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSC 635
Query: 358 LLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
LL+ I F + + G ++L++ +M + + Y ++ C+ +
Sbjct: 636 LLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGK 695
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE--CLEKCRPNRTIYG 475
+++ +E G+ P +Y L N +N G F E C E + Y
Sbjct: 696 ILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYN 755
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCL 535
+ + N+ + + + M+ ++ + N+ S NI++ Y+ G F K+ +Y M
Sbjct: 756 SLMNGYLKSRNVNTIKRMMSDMYQNE-VYPNSASYNILMHGYVKRGQFSKSLYLYKYMVR 814
Query: 536 KKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHM 595
K ++ L +L L+ + + + + ++ L G+ L + +
Sbjct: 815 KGIRPDNVTYRLL--ILGLSECGL---IDIAVKFLEKMVLEGIFPDRLVFD--------I 861
Query: 596 IRFQFNENSRMHSVLRRYLYDQYHEWLH--PSFKFW 629
+ F+E S+MH+ L+ + +WLH PS K +
Sbjct: 862 LITAFSEKSKMHNALQVF---NCMKWLHMSPSSKTF 894
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 103/259 (39%), Gaps = 4/259 (1%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+ A ++F+++L L Y+ +I + IDK +S+L EMQ G +
Sbjct: 346 INHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKA-LSILS-EMQITGVMPSELTY 403
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
++L K + A L I ++ + ++GE K+ +I + M E
Sbjct: 404 SALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFE 463
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
V Y +I +C+ + T+ ++ ++G+ P Y L Y G
Sbjct: 464 DGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKE 523
Query: 456 LHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
F + + N I+ L + G I +AE +M S I ++ S N I+
Sbjct: 524 ALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYM-SRMNISFDSVSFNRII 582
Query: 515 SAYLSSGDFVKAEKIYDLM 533
+Y G+ V A +YD M
Sbjct: 583 DSYCHRGNIVGAFSVYDDM 601
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 152/361 (42%), Gaps = 48/361 (13%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALAT--KLADYMGKERKFA-KCRDIFD 204
TY+ C + G + + M++ + F+F + + L D+ GK + R +FD
Sbjct: 139 TYVFSACSKFNGVFEGKQAHAQMIK---FPFEFGVHSWNSLLDFYGKVGEVGIVVRRVFD 195
Query: 205 DIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL 264
I +G P ++++ LI Y+ + G LDEA +++ M + R +
Sbjct: 196 KI--EG--PDVVSWNCLINGYVKS---GDLDEARRLFDEMPE---------------RDV 233
Query: 265 VSKPGGLSKY----YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
VS L Y +L +A +F + L + G I + Y ++ L
Sbjct: 234 VSWTIMLVGYADAGFLSEASCLFDEMPKRNLVSWSALIKGYIQIGCYSKALE------LF 287
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
KEMQ A + + ++ ++L CA+ G ++ WL + +GI A + ++ Y+
Sbjct: 288 KEMQVAKVKMDEVIVTTLLSACARLGALDQGR--WLHMYIDKHGIKVDAHLSTALIDMYS 345
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
K G + ++F+E G V + +I L E L + +E G++P
Sbjct: 346 KCGRIDMAWKVFQET----GDKKVFVWSSMIGGLAMHSFGEKAIELFAKMIECGIEPSEI 401
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLE--KCRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+YIN+ + G+ D F+ +E K +P YG ++ L AG + A +
Sbjct: 402 TYINILAACTHSGLVDVGLQIFNRMVENQKPKPRMQHYGCIVDLLGRAGLLHDAFRVVET 461
Query: 497 M 497
M
Sbjct: 462 M 462
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 156/337 (46%), Gaps = 26/337 (7%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + + K+ A+ + D++ +G P+E+T++ LI ++G L++A S+ +RM+
Sbjct: 245 LINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLC---LKGKLEKAISLLDRMV 301
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
P + ++ LV + L + + G + + +YS LI
Sbjct: 302 S-SKCVPNVVTYGTIINGLVKQGRAL------DGARVLALMEERGYHVNEYVYSALIS-G 353
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+++ +E + L K EM E V +V+ ++G ++A + + ++N
Sbjct: 354 LFKEGKSQEAMQLFK-EMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEM--TNNRC 410
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
A+ Y M+ + + G K++E++++M + + + Y +I LCK + ++ E+
Sbjct: 411 KPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCK--DGKVKEA 468
Query: 424 LM--KEFVETGMKPLMPSYINLTNMYLNLGM-HDRLHLAFSECL---EKCRPNRTIYGIY 477
+M + + G KP + +Y ++ N N G+ D L L ++E L +P+ Y I
Sbjct: 469 MMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQL-YNEMLCQEPDSQPDVVTYNIL 527
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
L +L +I +A ++ N M D+ + +C I L
Sbjct: 528 LNALCKQSSISRAIDLLNSML-DRGCDPDLVTCIIFL 563
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 142/353 (40%), Gaps = 20/353 (5%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + K + + + D++ G PS +TF++LI +G L + + M
Sbjct: 210 LMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCK---KGDLARVAKLVDNMF 266
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI-WL 304
L G P +N+L L K L++A + +++S Y +I L
Sbjct: 267 -LKGCAPNEVTYNTLIHGLCLKGK------LEKAISLLDRMVSSKCVPNVVTYGTIINGL 319
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
+D R+ L M++ G+ + V +++ KEG ++A + + + +
Sbjct: 320 VKQGRALDGARVLAL---MEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECE 376
Query: 365 IPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
+ T + ++ + G+ ++LE+ EM + Y +++ +A +
Sbjct: 377 LNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEM 436
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKN 483
K+ + Y L + G + +++ L K C+P+ YG + L N
Sbjct: 437 WKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSN 496
Query: 484 AGNIEKAEEIFNHM---HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
AG +E A +++N M D V T NI+L+A +A + + M
Sbjct: 497 AGLVEDALQLYNEMLCQEPDSQPDVVTY--NILLNALCKQSSISRAIDLLNSM 547
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 5/208 (2%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP---AFVYKMEAYAKIGEFMKSLEIFREM 393
SVL V +EG A + + ++ + +P F ++ K+G ++++FR+M
Sbjct: 136 SVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDM 195
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
V Y +++ LCKA+ + SL+ E G P ++ L N G
Sbjct: 196 PVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDL 255
Query: 454 DRL-HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI 512
R+ L + L+ C PN Y + L G +EKA + + M S + + N +
Sbjct: 256 ARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVP-NVVTYGT 314
Query: 513 ILSAYLSSGDFVKAEKIYDLMCLKKYEI 540
I++ + G + ++ LM + Y +
Sbjct: 315 IINGLVKQGRALDGARVLALMEERGYHV 342
Score = 39.7 bits (91), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 115/283 (40%), Gaps = 26/283 (9%)
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY 377
+ K + ++ G S++ A GD + EK R+ + FV +AY
Sbjct: 46 IFKSGPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAY 105
Query: 378 AKIGEFMKSLEIFREMQ-ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE------ 430
K K++ +F M E +V +++ ++ ++ + E L +E
Sbjct: 106 GKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVI-------IQEGLFYRALEFYNHVI 158
Query: 431 ----TGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAG 485
+ P + ++ + +G+ D F + + KC+P+ Y ++ L A
Sbjct: 159 GAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKAD 218
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWM 545
I++A + + M D + + N++++ GD + K+ D M LK
Sbjct: 219 RIDEAVSLLDEMQIDGCFP-SPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTY 277
Query: 546 EKLDYVLSLNRKEVKKPVSL---NLSSEQRENLI--GLLLGGL 583
L + L L K ++K +SL +SS+ N++ G ++ GL
Sbjct: 278 NTLIHGLCLKGK-LEKAISLLDRMVSSKCVPNVVTYGTIINGL 319
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 5/197 (2%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
++R G V DA +L+ + +EA K F +++ + EM+ +
Sbjct: 147 IIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG 206
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
+ ++ Y+ II +C+ + + ++ G +P + SY + D +
Sbjct: 207 CTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVK 266
Query: 458 LAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
+ F+E ++ KC PN + + + G +E+A ++ M S NT CNI+++A
Sbjct: 267 VLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQM-SQHGCTPNTTLCNIVINA 325
Query: 517 YLSSGDFVKAEKIYDLM 533
G + + YD +
Sbjct: 326 ICKQG---RVDDAYDFL 339
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 67/363 (18%), Positives = 143/363 (39%), Gaps = 15/363 (4%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M Q + T L + + K F + ++ D++ +G P+ +T++++I
Sbjct: 167 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCR--- 223
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G +D+A I NR+ G +QP + ++ + L + + +F ++
Sbjct: 224 EGRVDDAKEILNRLSSYG-FQPDIVSYTTVLKGLCAA------RRWDDVKVLFAEMVDKK 276
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ + L+ + ER + ++M Q G + V+ K+G V+D
Sbjct: 277 CVPNEVTFDMLVRFFCRGGMV--ERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDD 334
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
A + T ++ + + G + + E+ EM + + ++ I
Sbjct: 335 AYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFIC 394
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPN 470
+LC+ E L++ E G + +Y L + + G D F+ C PN
Sbjct: 395 ILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNN--LPCEPN 452
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
Y L L +A ++ A E+ M + +N + N+++S + G +A ++
Sbjct: 453 TITYTTLLTGLCHAERLDAAAELLAGM-IQKDCPLNAVTFNVLVSFFCQKGFVEEAMELV 511
Query: 531 DLM 533
+ M
Sbjct: 512 NQM 514
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 156/372 (41%), Gaps = 59/372 (15%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
V EW++++ ++ D L D G++ ++ + ++ ++ VP+E T+ +LI AY
Sbjct: 141 VCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 200
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRP-----SLHNSLFRALVSKPGGLSKYYLQQAE 280
A G ++ A + ++++ + P +++N+ L+ + G ++A
Sbjct: 201 CMA---GLIERAEVV---LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNT-----EEAI 249
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL-LKKEMQQAGFEEGKEVLLSVL 339
+F + + + Y+ +I L+ K +S L EM+ + +++
Sbjct: 250 DVFQRMKRDRCKPTTETYNLMINLYG---KASKSYMSWKLYCEMRSHQCKPNICTYTALV 306
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERL 397
A+EG E AE+ + +L E +G+ +VY ME+Y++ G + EIF MQ
Sbjct: 307 NAFAREGLCEKAEEIFEQLQE--DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMG 364
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
+Y+ +++ +A E++ +E G+ P M S++ L + Y
Sbjct: 365 CEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAY---------- 414
Query: 458 LAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
A ++ K E I M S+ + +T N +L+ Y
Sbjct: 415 ------------------------SKARDVTKCEAIVKEM-SENGVEPDTFVLNSMLNLY 449
Query: 518 LSSGDFVKAEKI 529
G F K EKI
Sbjct: 450 GRLGQFTKMEKI 461
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 127/300 (42%), Gaps = 29/300 (9%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ T+ L+ A+ +G ++A I+ ++ Q G +P ++N+L + S+ G
Sbjct: 297 PNICTYTALVNAFAR---EGLCEKAEEIFEQL-QEDGLEPDVYVYNALMESY-SRAG--- 348
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYS------GLIWLHSYQDNIDKERISLLKKEMQQA 326
Y A IF + G E + Y+ G LHS D E + +EM++
Sbjct: 349 --YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS-----DAEAVF---EEMKRL 398
Query: 327 GFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFM 384
G + + +L +K DV E + S+NG+ FV + Y ++G+F
Sbjct: 399 GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM--SENGVEPDTFVLNSMLNLYGRLGQFT 456
Query: 385 KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT 444
K +I EM+ +A + Y+ +I + KA E E L E E +P + ++ +
Sbjct: 457 KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRI 516
Query: 445 NMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
Y ++ + F E ++ C P+ + L + + +E+ + MH T+
Sbjct: 517 GAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTV 576
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 114/279 (40%), Gaps = 12/279 (4%)
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
F L+ G K+ ++AE ++ LL S +D Y+ LI + I++ + L+
Sbjct: 158 FNLLIDAYG--QKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLV- 214
Query: 321 KEMQQAGFEEGKEVLLSVLR-----VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME 375
EMQ K + ++V + ++G+ E+A + R+ T + +
Sbjct: 215 -EMQNHHVSP-KTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 272
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
Y K + S +++ EM+ ++ Y ++ + E E + ++ E G++P
Sbjct: 273 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 332
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ Y L Y G FS C P+R Y I +++ AG AE +F
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 392
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M I +S ++LSAY + D K E I M
Sbjct: 393 EEMKR-LGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 430
>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g19290
gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 193/462 (41%), Gaps = 40/462 (8%)
Query: 79 SVDFDVGTAGSEMRHL---GEPVVEVIELEELPEQWRRAKLAWLCKELPSHKGGTLVRIL 135
S+DF S +R L E +E+ L +++R A+ CK +V IL
Sbjct: 65 SLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAY-CK---------MVHIL 114
Query: 136 NAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGK--- 192
+ + + Q+ +YL C + N +GF V+ +++ +F+ + + D + K
Sbjct: 115 SRARNY--QQTKSYL---CELVALNHSGFVVWGELVRVFK---EFSFSPTVFDMILKVYA 166
Query: 193 ERKFAK-CRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
E+ K +FD++ N GR+PS ++ + L+ + +G A +Y++MI ++
Sbjct: 167 EKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVR---KGENFVALHVYDQMIS---FE 220
Query: 252 PRPSLHN-SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
P + S+ + G + K + F + GLE+ Y+ LI + Y
Sbjct: 221 VSPDVFTCSIVVNAYCRSGNVDKAMV----FAKETESSLGLELNVVTYNSLI--NGYAMI 274
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
D E ++ + + M + G S+++ K+G +E+AE + L E +
Sbjct: 275 GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMY 334
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
M+ Y + G+ ++ + M E + + +I CK+ + E + +
Sbjct: 335 GVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMND 394
Query: 431 TGMKPLMPSYINLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEK 489
+KP +Y L + Y G D L L C ++ P Y I L+ G
Sbjct: 395 WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHD 454
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
++ M + + + SC+ +L A GDF +A K+++
Sbjct: 455 VLSLWKMMLK-RGVNADEISCSTLLEALFKLGDFNEAMKLWE 495
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 7/164 (4%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
+ AY + G K++ +E + LG +V Y+ +I + E +++ E G
Sbjct: 232 VNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERG 291
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAE 491
+ + +Y +L Y G+ + F EK ++ +YG+ ++ G I A
Sbjct: 292 VSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAV 351
Query: 492 EIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ ++M IGV NT CN +++ Y SG V+AE+I+ M
Sbjct: 352 RVHDNMIE---IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM 392
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 152/353 (43%), Gaps = 32/353 (9%)
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH--NSLFRALVSKPGGLSKYY 275
++ LI AY + G + A +I++ MI+ G P P++ N + RAL+ G L + Y
Sbjct: 625 WNALIHAYAES---GLYEHARAIFDIMIKKG---PLPTVESVNGMMRALIVD-GRLDELY 677
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+ E L+I+ + L+ L ++ D + + M+ AG+ +
Sbjct: 678 VVVQEL-------QDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLY 730
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK---MEAYAKIGEFMKSLEIFRE 392
++ + D E L + E + P V + Y G F +++E++
Sbjct: 731 RIMISLLCHNKRFRDVE---LMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHS 787
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
+ E Y+ +I + + E +L+ E + G+ P + SY L +
Sbjct: 788 ILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKL 847
Query: 453 HDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
++ L F E K R NR+IY + ++ +NA N KAE + + M D I + +
Sbjct: 848 WEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKED-GIEPTIATMH 906
Query: 512 IILSAYLSSGDFVKAEKIYDLMCLKKYEIES--------AWMEKLDYVLSLNR 556
I++++Y +SG +AEK+ + + EI + A++ DY L + +
Sbjct: 907 ILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITK 959
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 166/399 (41%), Gaps = 36/399 (9%)
Query: 128 GGTLVRILN-AQKKWLRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALAT 184
G + +L+ ++ LR + TY L C + + V+E M+ R D
Sbjct: 114 AGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASEC-RPDLWTYN 172
Query: 185 KLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRM 244
+ G+ K + +F +++ +G P +T++ L+ A+ +G ++ + +
Sbjct: 173 AMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAK---EGDVERVERVCEEL 229
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
++ G++ +N++ + K G L A ++ + G Y+ L+
Sbjct: 230 VK-AGFRKDGITYNTMIH-MYGKMG-----RLDLALGLYDEMRAIGCTPDAVTYTVLV-- 280
Query: 305 HSYQDNIDK-ERISLLKK---EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
D++ K +RIS K EM AG + +++ AK G +DAE+T+ R++E
Sbjct: 281 ----DSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVE 336
Query: 361 SDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
S A++ ++ +A+ E K + ++R M + Y ++ L K E +
Sbjct: 337 SGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDE 396
Query: 421 TESLMKEFVET-GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLE 479
E ++++ M PL+ S I + ++ G L CL+ P+ L+
Sbjct: 397 IEGVIQDMEAVFEMNPLVISSILIKAECISQGA----SLLKRACLQGYEPDGKSLLSILD 452
Query: 480 SLKNAGNIEKA----EEIFNHMHSDQTIGVNTRSCNIIL 514
+ + G EK E I H+ + + C+I+L
Sbjct: 453 AYEKMGKHEKGLSLLEWIRQHVPNSHNL---ISECSIML 488
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 151/378 (39%), Gaps = 26/378 (6%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI--VAYLS 227
M+++ + D L L Y+ + F + +F D+ G VPS+ + +I L
Sbjct: 507 MLKRGSFGQDCDLYEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKIYQSIIYTCCRLG 566
Query: 228 APVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYL-QQAEFIFHNL 286
P QL R + ++ V+ K L QQAE L
Sbjct: 567 FP------------ETAYQLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGL 614
Query: 287 LT-SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKE 345
SG + + I++ LI H+Y ++ E + M + G E + ++R +
Sbjct: 615 KQESG--VDRRIWNALI--HAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVD 670
Query: 346 GDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
G +++ L + D I + +EA+AK G+ + ++I+ M+ ++ Y
Sbjct: 671 GRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLY 730
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE 465
+I LLC + E ++ E G KP + L MY G DR + LE
Sbjct: 731 RIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILE 790
Query: 466 K-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTR--SCNIILSAYLSSGD 522
P+ Y + + + N + EE F ++ G+ + S I+L+A +
Sbjct: 791 AGLEPDEDTYNTLI--VMYSRNF-RPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKL 847
Query: 523 FVKAEKIYDLMCLKKYEI 540
+ +A+ +++ M K Y +
Sbjct: 848 WEQADLLFEEMRTKGYRL 865
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 112/275 (40%), Gaps = 21/275 (7%)
Query: 164 FRVYEWM---MQQHWYRFDFA-LATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFH 219
FR E M M+ ++ D L T L Y G F + +++ I+ G P E T++
Sbjct: 743 FRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTG-NFDRTIEVYHSILEAGLEPDEDTYN 801
Query: 220 ILIVAYLSA--PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
LIV Y P +G + + ++G P L + ++ L++ G + +
Sbjct: 802 TLIVMYSRNFRPEEG--------FTLLYEMGKRGLTPKLES--YKILLAASGKAKLW--E 849
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
QA+ +F + T G + + IY + + Y++ + + L M++ G E +
Sbjct: 850 QADLLFEEMRTKGYRLNRSIYH--MMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHI 907
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
++ G ++AEK L S+ I T + ++AY + ++ + EM+
Sbjct: 908 LMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDG 967
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
+ I E+T+ L+K + G
Sbjct: 968 VEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCG 1002
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 181/452 (40%), Gaps = 45/452 (9%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L K+ K + D+F + +G + + L+ ++A G +D A ++ ++
Sbjct: 384 TPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAA---GEVDVALTVRDK 440
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M++ G P +++N L L K G LS L E + NL + + G I
Sbjct: 441 MVERG-VLPDANVYNVLMNGLCKK-GRLSAAKLLLVEMLHQNLSLDAF-VSATLVDGFIR 497
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
H D K L + G + G ++++ K G + DA R+ + D+
Sbjct: 498 -HGKLDEAKK-----LFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDH 551
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
+ ++ Y K + +L++F +M ++ +V Y +I C+ ++ E
Sbjct: 552 SPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEK 611
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS-ECLEKCRPNRTIYGIYLESLK 482
+E +G+KP + +Y L + G + F L +C PN + + L
Sbjct: 612 TFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLT 671
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD--LMCLKKYEI 540
N A + N +++++ + +S G + + Y+ L+CL +++
Sbjct: 672 N----NLATAVSN--KANESLEIKASLMMDFFRTMISDG-WEQRVAAYNSVLICLCHHKM 724
Query: 541 ESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQF 600
+A ++ D + + PVS L+ GLC+E K ++ I +
Sbjct: 725 VNAALQLRDKMTG--KGIFPDPVSF-----------AALVYGLCLEGRSKEWKNTISCKL 771
Query: 601 NENSRMHSVLRRYLYDQYHEWLHPSFKFWPKG 632
NE +V +Y + L+P F PKG
Sbjct: 772 NEWELQIAV-------KYSQKLNP---FLPKG 793
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 97/523 (18%), Positives = 198/523 (37%), Gaps = 85/523 (16%)
Query: 156 RIRENETGFRVYEWMMQQHWYR--FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
RIR+ G +++EW ++ + D + L + + R F + ++ + + + P
Sbjct: 73 RIRDPGLGLKLFEWASKRSDFNDLLDGFSCSSLLKLLARCRVFVEVENLLETMKCKDLAP 132
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK 273
+ ++ AY+ + G ++ A +Y+ + Y P N+L AL+
Sbjct: 133 TREALSFVVGAYVDS---GLVNRALELYHIAYDIHNYLPDVIACNALLNALI-------- 181
Query: 274 YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKE 333
QQ + +EI + +Y ++ ++ G +
Sbjct: 182 ---QQKK----------VEIARKVYEEMV---------------------KRDGCWDNYS 207
Query: 334 VLLSVLRVCAKEGDVEDAEKT----WLRLLESDNGIPTPAFVYKM-EAYAKIGEFMKSLE 388
V + V +C KE VE+ K W IP F + + Y K G+ ++
Sbjct: 208 VCIMVRGLC-KERKVEEGRKLINDRW-----GKGCIPNIVFYNTLVDGYWKRGDVERANG 261
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+F+E++ + + Y +I LCK + + L+ E E G+ + Y ++ + +
Sbjct: 262 LFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQI 321
Query: 449 NLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
G + E C P+ T Y + G + +AEE+ H + + N
Sbjct: 322 KHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHA-IKRGLSPNK 380
Query: 508 RSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL----------DYVLSLNRK 557
S ++ Y G ++A ++ M K + ++ L D L++ K
Sbjct: 381 LSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDK 440
Query: 558 EVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQ 617
V++ V + N+ +L+ GLC + + ++ ++N + + + L D
Sbjct: 441 MVERGVLPD------ANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDG 494
Query: 618 Y--HEWLHPSFKFWPKGRLVIPKLIHRWLTPRALAYWFMYGGH 658
+ H L + K + L I K + P + Y M G+
Sbjct: 495 FIRHGKLDEAKKLF---ELTIAK----GMDPGVVGYNAMIKGY 530
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 146/354 (41%), Gaps = 25/354 (7%)
Query: 195 KFAKCRDI---FDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K K D+ F D+I G P+ T++I+I +G ++ A ++ M + G
Sbjct: 239 KLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK---EGDVEAARGLFEEM-KFRGLV 294
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P +NS+ G + + L F + E Y+ LI
Sbjct: 295 PDTVTYNSMIDGF----GKVGR--LDDTVCFFEEMKDMCCEPDVITYNALINCFC---KF 345
Query: 312 DKERISL-LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
K I L +EM+ G + +++ KEG ++ A K ++ + G+ +
Sbjct: 346 GKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV--GLVPNEY 403
Query: 371 VYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
Y ++A KIG + + EM + +V Y +I+ LC AE + E L +
Sbjct: 404 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNI 487
G+ P + SY L + ++ DR +E + +P+ +YG ++ L + I
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 523
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIE 541
E A+ + N M + I N+ ++ AY SG+ + + D M K+ +IE
Sbjct: 524 EAAKVVMNEM-KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM--KELDIE 574
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/297 (18%), Positives = 111/297 (37%), Gaps = 46/297 (15%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
+ L D KE + + D+ G VP+E T+ LI A G L +A + N
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKI---GNLSDAFRLGNE 427
Query: 244 MIQLG----------------------------------GYQPRPSLHNSLFRALVSKPG 269
M+Q+G G P + +N+L V
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
+ +A + + L G++ +Y IW + I+ ++ + EM++ G +
Sbjct: 488 ------MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM--NEMKECGIK 539
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEI 389
+ +++ K G+ + + E D + F ++ K K+++
Sbjct: 540 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDY 599
Query: 390 FREMQERLG-SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
F + G A+ + +I+ LCK + E +L ++ V+ G+ P +Y +L +
Sbjct: 600 FNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 80/200 (40%), Gaps = 11/200 (5%)
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA----EKTWLRLL 359
LH + + + K+M AG ++ KEGDVE A E+ R L
Sbjct: 234 LHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGL 293
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
D T + ++ + K+G ++ F EM++ V Y+ +I CK +
Sbjct: 294 VPD----TVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLP 349
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGIY 477
+ +E G+KP + SY L + + GM + + F + + PN Y
Sbjct: 350 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ-AIKFYVDMRRVGLVPNEYTYTSL 408
Query: 478 LESLKNAGNIEKAEEIFNHM 497
+++ GN+ A + N M
Sbjct: 409 IDANCKIGNLSDAFRLGNEM 428
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 147/365 (40%), Gaps = 40/365 (10%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R+ + E V+E + + + FA + ++ Y GK F + +F+ + G P+
Sbjct: 199 RLGKVELAKGVFETALSEGYGNTVFAFSALISAY-GKSGYFDEAIKVFESMKVSGLKPNL 257
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+T++ +I A V+ I+ M++ G QP +NSL A+ S+ GGL +
Sbjct: 258 VTYNAVIDACGKGGVE--FKRVVEIFEEMLR-NGVQPDRITYNSLL-AVCSR-GGLWEAA 312
Query: 276 -----------LQQAEFIFHNLLTS---------GLEIQ-----KDIYSGLIWLHSYQDN 310
+ Q F ++ LL + EI K I ++ + D
Sbjct: 313 RNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADG 372
Query: 311 IDK----ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
K E L EM+ G + ++L + AK G EDA K + S G+
Sbjct: 373 YAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSS--GVK 430
Query: 367 TPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
Y ++ Y K G+F + +F+EM++ ++ Y +I++ K E +
Sbjct: 431 KDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEV 490
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKN 483
+EF + G+K + Y L N G+ D L E E RPN Y +++
Sbjct: 491 FREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGR 550
Query: 484 AGNIE 488
+ E
Sbjct: 551 STTAE 555
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 102/248 (41%), Gaps = 14/248 (5%)
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
F AL+S G Y +A +F ++ SGL+ Y+ +I + ++ +R+ +
Sbjct: 225 FSALISAYG--KSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACG-KGGVEFKRVVEIF 281
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
+EM + G + + S+L VC++ G E A + ++ D GI F Y ++A
Sbjct: 282 EEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMI--DRGIDQDVFTYNTLLDAVC 339
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
K G+ + EI EM + +V Y + + KA E +L E G+
Sbjct: 340 KGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRV 399
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLE----KCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
SY L ++Y LG R A C E + + Y L+ G + +F
Sbjct: 400 SYNTLLSIYAKLG---RFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVF 456
Query: 495 NHMHSDQT 502
M D+
Sbjct: 457 KEMKKDRV 464
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 9/161 (5%)
Query: 374 MEAYAKIG-EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++A K G EF + +EIF EM Y+ ++ + + E +L E ++ G
Sbjct: 264 IDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRG 323
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE----KCRPNRTIYGIYLESLKNAGNIE 488
+ + +Y L + G D LA+ LE K PN Y + AG +E
Sbjct: 324 IDQDVFTYNTLLDAVCKGGQMD---LAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLE 380
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
A ++N M IG++ S N +LS Y G F A K+
Sbjct: 381 DALNLYNEMKF-LGIGLDRVSYNTLLSIYAKLGRFEDALKV 420
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 156/370 (42%), Gaps = 56/370 (15%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
+ + + D M K + + D+F ++I++G P +T+ LI + + G L++A
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFC---ILGKLNDAI 280
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
++N+MI L +P N L A K G + ++ + +F ++ G++ Y
Sbjct: 281 DLFNKMI-LENIKPDVYTFNILVNAF-CKDGKM-----KEGKTVFDMMMKQGIKPNFVTY 333
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+ L + Y L KE+ +A S+ A+ G D +
Sbjct: 334 NSL--MDGY----------CLVKEVNKAK---------SIFNTMAQGGVNPDIQ------ 366
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
++ + + KI +F +++ +F+EM + V Y +I+ L K+
Sbjct: 367 ----------SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI 416
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIY 477
L+ + + G+ P + +Y ++ + + D+ ++ +K +PN Y I
Sbjct: 417 SYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSIL 476
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA----EKIYDLM 533
++ L +G +E A ++F + + +N + I++ + G F +A K+ D
Sbjct: 477 IKGLCQSGKLEDARKVFEGLLV-KGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNG 535
Query: 534 CL---KKYEI 540
C+ K YEI
Sbjct: 536 CIPDAKTYEI 545
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 129/303 (42%), Gaps = 15/303 (4%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF--IFHNLLTSGL 291
+D+A S++NR+++ P + L + SK Y Q+ EF I NL+ +
Sbjct: 66 VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125
Query: 292 EIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
I GLI S+ K ++ G+ ++++ +G ++ A
Sbjct: 126 LINCFCQLGLIPF----------AFSVFAKILKM-GYVPDTITFTTLIKGLCLKGQIQQA 174
Query: 352 EKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
+++ ++ + K+GE +L++ + + L +V Y+ II+
Sbjct: 175 FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS 234
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPN 470
+CK + L E + G+ P + +Y L + + LG ++D + L LE +P+
Sbjct: 235 MCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPD 294
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+ I + + G +++ + +F+ M Q I N + N ++ Y + KA+ I+
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMK-QGIKPNFVTYNSLMDGYCLVKEVNKAKSIF 353
Query: 531 DLM 533
+ M
Sbjct: 354 NTM 356
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 128/316 (40%), Gaps = 14/316 (4%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F I+ G VP +TF LI ++G + +A +++++ LG + + S + +L
Sbjct: 142 VFAKILKMGYVPDTITFTTLIKGLC---LKGQIQQAFLFHDKVVALGFHFDQIS-YGTLI 197
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L G ++ L + + NL+ + + I + + + D L
Sbjct: 198 HGLCKV--GETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFD------LFS 249
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
EM G +++ G + DA + +++ + F + A+ K G
Sbjct: 250 EMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDG 309
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ + +F M ++ + Y+ +++ C +E +S+ + G+ P + SY
Sbjct: 310 KMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYS 369
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
+ N + + D F E K P+ Y ++ L +G I A ++ + MH D
Sbjct: 370 IMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH-D 428
Query: 501 QTIGVNTRSCNIILSA 516
+ + R+ N IL A
Sbjct: 429 RGVPPTIRTYNSILDA 444
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 134/305 (43%), Gaps = 27/305 (8%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
D+F+ +I + P TF+IL+ A+ G + E ++++ M++ G +P +NSL
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCK---DGKMKEGKTVFDMMMK-QGIKPNFVTYNSL 336
Query: 261 FRA--LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
LV + + +A+ IF+ + G + DI S I ++ + +
Sbjct: 337 MDGYCLVKE--------VNKAKSIFNTMAQGG--VNPDIQSYSIMINGFCKIKKFDEAMN 386
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES--DNGIPTPAFVYK--M 374
L KEM + S++ +K G + A L+L++ D G+P Y +
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA----LQLVDQMHDRGVPPTIRTYNSIL 442
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
+A KI + K++ + +++++ ++ Y +I+ LC++ + E + + + G
Sbjct: 443 DALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHN 502
Query: 435 PLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEE 492
+ +Y + + G+ + LA +E C P+ Y I + SL + AE+
Sbjct: 503 LNVDTYTIMIQGFCVEGLFNE-ALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEK 561
Query: 493 IFNHM 497
+ M
Sbjct: 562 LLREM 566
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 136/334 (40%), Gaps = 48/334 (14%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE--ACSIYNRMIQLGGYQP 252
+F + F D+ G P+ +T+ V+ LSA +G D ++ R++ G P
Sbjct: 102 RFGESCGSFVDMARAGAAPTPVTY----VSVLSACGKGTRDVLLGMQVHGRVVG-SGVLP 156
Query: 253 RPSLHNSL--FRALVSKPGGLSKYY--LQQAEFIFHNLLTSGL------EIQKDIYS--- 299
+ N+L A + G K + +Q + L SGL + +D++
Sbjct: 157 DLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMP 216
Query: 300 ------------GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGD 347
G +W +++ ++ + +EMQ + + ++SV+ CA+ G
Sbjct: 217 ERDTVSWTAMIDGYVWAARFREALE------MFREMQYSNVSADEFTMVSVITACAQLGA 270
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
+E E W+R+ S GI AFV ++ Y+K G ++L++F+ M R
Sbjct: 271 LEMGE--WVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHR---DKFTWT 325
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE 465
I+ L E E E + + P ++I + + G+ D+ F +E
Sbjct: 326 AIILGLAVNGYEEEAIE-MFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIE 384
Query: 466 --KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
PN YG ++ L AG I +A + + M
Sbjct: 385 AYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQM 418
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 140/361 (38%), Gaps = 50/361 (13%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ + R D T+L +GK + + F ++ +G P + F ++ +L
Sbjct: 258 MRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRP-DTVFMNNMINFLGKA- 315
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G LD+A ++ M L P +N++ +AL SK + F + SG
Sbjct: 316 -GRLDDAMKLFQEMETLRCI-PSVVTYNTIIKALFE-----SKSRASEVPSWFERMKESG 368
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ YS I + + E+ +L +EM + GF
Sbjct: 369 ISPSSFTYS--ILIDGFCKTNRMEKAMMLLEEMDEKGFP--------------------- 405
Query: 351 AEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
P P A+ ++A K + + E+F+E++E GS+S Y +I
Sbjct: 406 ---------------PCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMI 450
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CR 468
+ L KA + ++ E + G P + +Y L + GM D E C
Sbjct: 451 KHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCI 510
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
P+ Y I L L G +A E+ ++M T+ + S N +L A +G F +A K
Sbjct: 511 PDINSYNIILNGLAKTGGPHRAMEMLSNM-KQSTVRPDVVSYNTVLGALSHAGMFEEASK 569
Query: 529 I 529
+
Sbjct: 570 L 570
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 3/186 (1%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
S++ + EG E + + + + P T + + A+ K+G ++++ EM+E
Sbjct: 166 SMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKE 225
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
+ Y +I L K + SL +E +P + +Y L G D
Sbjct: 226 IGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDE 285
Query: 456 LHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
+ F E E CRP+ + L AG ++ A ++F M + + I + + N I+
Sbjct: 286 AYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIP-SVVTYNTII 344
Query: 515 SAYLSS 520
A S
Sbjct: 345 KALFES 350
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 147/365 (40%), Gaps = 40/365 (10%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R+ + E V+E + + + FA + ++ Y GK F + +F+ + G P+
Sbjct: 199 RLGKVELAKGVFETALSEGYGNTVFAFSALISAY-GKSGYFDEAIKVFESMKVSGLKPNL 257
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+T++ +I A V+ I+ M++ G QP +NSL A+ S+ GGL +
Sbjct: 258 VTYNAVIDACGKGGVE--FKRVVEIFEEMLR-NGVQPDRITYNSLL-AVCSR-GGLWEAA 312
Query: 276 -----------LQQAEFIFHNLLTS---------GLEIQ-----KDIYSGLIWLHSYQDN 310
+ Q F ++ LL + EI K I ++ + D
Sbjct: 313 RNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADG 372
Query: 311 IDK----ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
K E L EM+ G + ++L + AK G EDA K + S G+
Sbjct: 373 YAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSS--GVK 430
Query: 367 TPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
Y ++ Y K G+F + +F+EM++ ++ Y +I++ K E +
Sbjct: 431 KDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEV 490
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKN 483
+EF + G+K + Y L N G+ D L E E RPN Y +++
Sbjct: 491 FREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGR 550
Query: 484 AGNIE 488
+ E
Sbjct: 551 STTAE 555
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 102/248 (41%), Gaps = 14/248 (5%)
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
F AL+S G Y +A +F ++ SGL+ Y+ +I + ++ +R+ +
Sbjct: 225 FSALISAYG--KSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACG-KGGVEFKRVVEIF 281
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
+EM + G + + S+L VC++ G E A + ++ D GI F Y ++A
Sbjct: 282 EEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMI--DRGIDQDVFTYNTLLDAVC 339
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
K G+ + EI EM + +V Y + + KA E +L E G+
Sbjct: 340 KGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRV 399
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLE----KCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
SY L ++Y LG R A C E + + Y L+ G + +F
Sbjct: 400 SYNTLLSIYAKLG---RFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVF 456
Query: 495 NHMHSDQT 502
M D+
Sbjct: 457 KEMKKDRV 464
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 9/161 (5%)
Query: 374 MEAYAKIG-EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++A K G EF + +EIF EM Y+ ++ + + E +L E ++ G
Sbjct: 264 IDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRG 323
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE----KCRPNRTIYGIYLESLKNAGNIE 488
+ + +Y L + G D LA+ LE K PN Y + AG +E
Sbjct: 324 IDQDVFTYNTLLDAVCKGGQMD---LAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLE 380
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
A ++N M IG++ S N +LS Y G F A K+
Sbjct: 381 DALNLYNEMKF-LGIGLDRVSYNTLLSIYAKLGRFEDALKV 420
>gi|357458279|ref|XP_003599420.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488468|gb|AES69671.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 511
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 149/381 (39%), Gaps = 49/381 (12%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
+ ++E + Q+WY TKL + K ++ + +++ ++ +G P+
Sbjct: 113 QNALMIFELLRNQYWYEPRCQTYTKLLMMLSKCKQPKEASQLYETMLFEGLKPTVDVLTA 172
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ AY + G A S M + +P ++ + L+S ++ L E
Sbjct: 173 LVSAYGQS---GLFRHAFSTIEDMKSV--VDCKPDVYT--YSVLISCCAKFRRFDL--IE 223
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ ++ SG+E Y+ +I + ++ SL ++ + L S++
Sbjct: 224 RVLADMSYSGIECNSVTYNSIIDGYGKAGMFEQMENSLTDM-IENENCQPDVFTLNSLIG 282
Query: 341 VCAKEGDVEDAEKTW--LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
G ++ EK + +L+ I T F +++Y K G + K + M+ R
Sbjct: 283 SYGNGGKIDKMEKWYDEFQLMSIKPDIKT--FNMMIKSYGKAGMYDKMKSVMDFMERRFF 340
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
+ ++ Y+ +IE+ KA E E + K GMKP +Y +L N Y
Sbjct: 341 APTIVTYNTVIEVYGKAGEIEKMDKHFKNMKHIGMKPNSVTYCSLVNAY----------- 389
Query: 459 AFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
AG I K + I H+ + I ++T N I+SAY
Sbjct: 390 -----------------------SKAGLIRKIDSILRHVENSDVI-LDTPFFNCIISAYG 425
Query: 519 SSGDFVKAEKIYDLMCLKKYE 539
GD K +++ M +K E
Sbjct: 426 QVGDLKKMGELFLAMRARKCE 446
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 132/347 (38%), Gaps = 24/347 (6%)
Query: 165 RVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVA 224
++ + M+++ D L + KE KF + +++D+++ +G +PS +T+ +I
Sbjct: 276 QLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDG 335
Query: 225 YLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
+ Q LD A ++ ++ G P N+L G + + H
Sbjct: 336 FCK---QNRLDAAEHMF-YLMATKGCSPDIITFNTLI------AGYCRAKRVDDGIKLLH 385
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
+ +GL Y+ LI H + D L +EM +G ++L
Sbjct: 386 EMTEAGLVANTITYTTLI--HGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCD 443
Query: 345 EGDVEDAEKTWLRLLESD---------NGIPTPAFVYKMEAYAKI--GEFMKSLEIFREM 393
G ++DA + + + +S NG+ Y + I G+F+++ E++ EM
Sbjct: 444 NGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 503
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-M 452
R Y+ +I LCK + + P + ++ L N Y G +
Sbjct: 504 PHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 563
Query: 453 HDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
D L L N Y + + GNI A +IF M +
Sbjct: 564 DDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMA 610
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/349 (19%), Positives = 144/349 (41%), Gaps = 34/349 (9%)
Query: 205 DIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL 264
D+ +Q P+ +TF L+ +G + EA ++ +RM++ G QP + ++ +
Sbjct: 169 DLFHQMCKPNVVTFTTLMNGLCR---EGRVVEAVALLDRMLE-DGLQPNQITYGTIVDGM 224
Query: 265 VSKPGGLSKYYL----QQAEFIFHNLLTSGLEIQKDIYSGLI----WLHSYQDNIDKERI 316
+S L ++ I N++ LE + + +G W + Q
Sbjct: 225 CKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQ-------- 276
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEA 376
LL++ +++ +++ KEG +AE+ + +L T + ++
Sbjct: 277 -LLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDG 335
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
+ K + +F M + S + ++ +I C+A+ + L+ E E G+
Sbjct: 336 FCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVAN 395
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+Y L + + +G + E + C PN L+ L + G ++ A E+F
Sbjct: 396 TITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVC-PNVVTCNTLLDGLCDNGKLKDALEMF 454
Query: 495 NHM----------HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M H + + ++ NI++S ++ G F++AE++Y+ M
Sbjct: 455 KAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 503
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 68/171 (39%), Gaps = 2/171 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ A+ K G+F ++ E++ EM R S Y +I+ CK + E + G
Sbjct: 298 INAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 357
Query: 434 KPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
P + ++ L Y + D + L N Y + G++ A++
Sbjct: 358 SPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQD 417
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESA 543
+ M S + N +CN +L +G A +++ M K +I+++
Sbjct: 418 LLQEMVS-SGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDAS 467
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 135/349 (38%), Gaps = 14/349 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ D + K+ + RD+ D+ ++G +P+ T++IL+ Y G L EA ++ M
Sbjct: 249 ILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCK---MGWLKEAANVIELMT 305
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
Q P +N L L ++ G + + + + E LL + I L W
Sbjct: 306 Q-NNLLPDVWTYNMLINGLCNE-GRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
E LL+ EM + G + +++ KEG ++DA T ++ ES
Sbjct: 364 I------SEAFKLLE-EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSP 416
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
+ + Y K G ++ EM + + I+ LC+ ++ E L+
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNA 484
+ G SY L Y G DR + E EK P+ Y + L
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQC 536
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G E+A N + + T + N IL Y GD KA + ++ M
Sbjct: 537 GKTEQAISKLNELLESGLLPDET-TYNTILHGYCREGDVEKAFQFHNKM 584
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 158/413 (38%), Gaps = 60/413 (14%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
+M Q+ D L + + E + + + D++ N +P ++++ LI
Sbjct: 303 LMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLI------- 355
Query: 230 VQGCLD-----EACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
GCL+ EA + M + G +P HN + + K G + A
Sbjct: 356 -NGCLEWSKISEAFKLLEEMSE-KGVKPNAVTHNIMVK-WYCKEGKM-----DDASNTIT 407
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
+ SG Y+ LI + N+ + ++ EM + + L ++LR +
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTM--DEMGRKNMKMDSVTLNTILRTLCR 465
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
E +E+A K + I ++ + Y K G ++L+++ EM+E+ S
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
Y+ II LC+ +TE S + E +E+G+
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGL------------------------------- 554
Query: 465 EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFV 524
P+ T Y L G++EKA + N M + + + +CNI+L G
Sbjct: 555 ---LPDETTYNTILHGYCREGDVEKAFQFHNKM-VENSFKPDVFTCNILLRGLCMEGMLE 610
Query: 525 KAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIG 577
KA K+++ K I++ L L KE + + NL SE E +G
Sbjct: 611 KALKLFNTWVSKGKAIDTVTYNTLITSLC---KEGRLDDAFNLLSEMEEKELG 660
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 147/344 (42%), Gaps = 32/344 (9%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS--LH 257
R+ F+D I G VP+ TF+I+I Y ++ +A N M G Y P +
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYC---LENKFKDAVEFLNVM---GKYNCSPDNVTY 246
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
N++ AL K L A + ++ + GL ++ Y+ L++ + + KE +
Sbjct: 247 NTILDALCKKG------RLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWL-KEAAN 299
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA-----EKTWLRLLESDNGIPTPAFVY 372
+++ Q + + + +C EG +E+A E L+LL + + +
Sbjct: 300 VIELMTQNNLLPDVWTYNMLINGLC-NEGRIEEAFKLRDEMENLKLLP--DVVSYNTLIN 356
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++KI E K LE EM E+ + ++ +++ CK + + + + + E+G
Sbjct: 357 GCLEWSKISEAFKLLE---EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLES-LKNAGNIEKAE 491
P +Y L N Y G + AF E R N + + L + L+ +K E
Sbjct: 414 FSPDCVTYNTLINGYCKAG---NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLE 470
Query: 492 EIFNHMHSDQTIG--VNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
E + + S + G ++ S ++ Y G+ +A K++D M
Sbjct: 471 EAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM 514
>gi|449449679|ref|XP_004142592.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Cucumis sativus]
gi|449516715|ref|XP_004165392.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Cucumis sativus]
Length = 594
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 162/417 (38%), Gaps = 51/417 (12%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERK---FAKCRDIFDDIIN----------------QG 210
++Q+ Y+ A+++ D M + F C ++ +N G
Sbjct: 143 ILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMVMSG 202
Query: 211 RVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGG 270
VP +T++++I QG L+ A + N M L G P +N++ R +
Sbjct: 203 GVPDIITYNMVIGCLCK---QGHLESAIELLNDM-SLSGCPPDVITYNAVIRHMFD---- 254
Query: 271 LSKYYLQQAEFIFHNLL--TSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK--KEMQQA 326
+ + Q EF L T I I L+W H + + L+ +EM
Sbjct: 255 -NGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKH-------RGTVCALEVLEEMANE 306
Query: 327 GFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFM 384
G S++ + K+G EDA LL +G+ A Y + + ++ G +
Sbjct: 307 GCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLF--HGMVPDAVTYNTLLHSLSRRGHWD 364
Query: 385 KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT 444
+ EI + M L +V + +I LCK + + + + P + +Y L
Sbjct: 365 EVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLL 424
Query: 445 NMYLNLGMHDR----LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
GM D LHL C P Y L+ L G ++KA +++ M +
Sbjct: 425 GALCKEGMVDEAFQLLHLLTDT---ACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMEN 481
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRK 557
I +T +II + S FV+A + + YE+ S++ L + L LN+K
Sbjct: 482 GIIPDDTTHRSIIW-GFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKK 537
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/369 (19%), Positives = 149/369 (40%), Gaps = 13/369 (3%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
+V+ ++ + Y + +G+E K R+IF+ + G PS + L+
Sbjct: 13 ALQVFRFLQEHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALL 72
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
Y QG L EA +++ M + G P +N+L A + Y L +
Sbjct: 73 SGYAK---QGLLKEAWALFEAMKE-KGCSPNVLTYNTLINACTKRA-----YRLPDLVGL 123
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
F + +G++ Y+ ++ D S + KEM+ +++
Sbjct: 124 FEEMKQAGVQPNDITYNCMVNACVCLSLFDTA--SQILKEMKAVNCLPNVISYTTMINSL 181
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
+ G +++A + + + E + + ++AYA+ G + K++ +F M++ +
Sbjct: 182 GRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDL 241
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH-LAFS 461
Y+ +I++ + E + E G P +Y + + Y R L +
Sbjct: 242 YTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKT 301
Query: 462 ECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
C P+ Y I L++ AG+ +A +IF+ + + N S + +++ Y G
Sbjct: 302 MKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGH-SPNLVSFSALINMYGRLG 360
Query: 522 DFVKAEKIY 530
F +AE+ +
Sbjct: 361 YFEEAERAW 369
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 11/203 (5%)
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
++++ + +EG + A + + + ++ A+ + YAK G ++ +F M+E
Sbjct: 34 VTIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKE 93
Query: 396 RLGSASVPAYHKIIELLCKAEETELTE--SLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
+ S +V Y+ +I C L + L +E + G++P +Y + N + L +
Sbjct: 94 KGCSPNVLTYNTLIN-ACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLF 152
Query: 454 DRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI 512
D E C PN Y + SL +G +++A E+F M + N+ + N
Sbjct: 153 DTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEM-KELGRSPNSWTYNS 211
Query: 513 ILSAYLSSGDFVKAEKIYDLMCL 535
+L AY G + KA MCL
Sbjct: 212 LLKAYAREGRYEKA------MCL 228
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/374 (19%), Positives = 151/374 (40%), Gaps = 31/374 (8%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D L D + F + + ++G VP + T+ +I + + ++EAC
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR---VEEAC 517
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
+++ + Q G P ++ +L K G + + +L + + N L + L +
Sbjct: 518 DLFDSLEQ-KGVNPNVVMYTALIDGYC-KAGKVDEAHLMLEKMLSKNCLPNSL-----TF 570
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
+ LI H + + +LL+++M + G + ++ K+GD + A + ++
Sbjct: 571 NALI--HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
L S + ++ Y + G + + ++ +M+E S + Y +I+ +T
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNL-------------GMHDRLHL-AFSECL 464
++K +TG +P ++++L L + M + + E L
Sbjct: 689 NFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELL 748
Query: 465 EK-----CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
EK PN Y + + GN+ AE++F+HM ++ I + N +LS
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Query: 520 SGDFVKAEKIYDLM 533
+A K+ D M
Sbjct: 809 LKKHNEAAKVVDDM 822
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 385 KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT 444
+++++F +M++ +V Y +I+ LC +E +L+KE ETG+KP + +Y L
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 445 NMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
+ + ++ + LEK PN Y + G IE A ++ M S + +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES-RKL 424
Query: 504 GVNTRSCNIILSAYLSS 520
NTR+ N ++ Y S
Sbjct: 425 SPNTRTYNELIKGYCKS 441
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ + A+ G + +++ EM E ++ Y+K++ CK E + + VE G+
Sbjct: 190 LNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGL 249
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
P +Y +L Y D F+E L+ CR N Y + L A I++A +
Sbjct: 250 DPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMD 309
Query: 493 IFNHMHSDQ 501
+F M D+
Sbjct: 310 LFVKMKDDE 318
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 127/296 (42%), Gaps = 19/296 (6%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIY-NRM 244
L D MGK + + + +++ +G + +T++ +I + + L++A +Y N M
Sbjct: 875 LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRR---LEQAIDLYYNLM 931
Query: 245 IQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
Q G+ P P + L L L ++ AE +F+ +L G + IY+ L+
Sbjct: 932 SQ--GFSPTPCTYGPLLDGL------LKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 983
Query: 305 HSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
H N E++ L ++M G + ++ K G + D + +LLE G
Sbjct: 984 HRIAGN--TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM--G 1039
Query: 365 IPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+ Y + + K +++ +F EMQ++ ++ Y+ +I L KA +
Sbjct: 1040 LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAG 1099
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIY 477
+ +E + G KP + +Y L Y G D + A+ + C PN + I+
Sbjct: 1100 KMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHIH 1155
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 136/334 (40%), Gaps = 16/334 (4%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR-MIQLGGY 250
KE ++ + IF + + +P T ++ +++ G + EA I +Q G
Sbjct: 706 KEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKI---GLMKEALHIIKEYFLQPGSK 761
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
R S H SL ++ K G ++ ++ AE I +SG+ + D + + H +
Sbjct: 762 TDRSSCH-SLMEGILKKAG--TEKSIEFAEII----ASSGITLD-DFFLCPLIKHLCKQK 813
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
E L+KK + G S++ E ++ AE + + E G +
Sbjct: 814 KALEAHELVKK-FKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTY 872
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
++A K + L++ EM + ++ Y+ II L K+ E L +
Sbjct: 873 NLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMS 932
Query: 431 TGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEK 489
G P +Y L + L G + F+E LE C+ N TIY I L + AGN EK
Sbjct: 933 QGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEK 992
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
+F M DQ I + +S II+ +G
Sbjct: 993 VCHLFQDM-VDQGINPDIKSYTIIIDTLCKAGQL 1025
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 63/336 (18%), Positives = 141/336 (41%), Gaps = 29/336 (8%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ Y + T + D + + + + ++FD++ +G VP + +++ LI +L A
Sbjct: 405 MKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADR 464
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG----GLSKYYLQQAEFIFHNL 286
G +A ++ M + G +P H LF K G + +Y L +++ I ++
Sbjct: 465 FG---DALELFKYM-DIHGPKPNGYTH-VLFINYYGKSGESIKAIQRYELMKSKGIVPDV 519
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK---EMQQAGFEEGKEVLLSVLRVCA 343
+ + SG R+ + K+ E++ G +++ C+
Sbjct: 520 VAGNAVLFGLAKSG--------------RLGMAKRVFHELKAMGVSPDTITYTMMIKCCS 565
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKM-EAYAKIGEFMKSLEIFREMQERLGSASV 402
K ++A K + ++E +N +P V + + K G ++ +IF +++E +
Sbjct: 566 KASKFDEAVKIFYDMIE-NNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTD 624
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL-NLGMHDRLHLAFS 461
Y+ ++ L + + + L++E + P + +Y + + N ++D L + +S
Sbjct: 625 GTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYS 684
Query: 462 ECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ C P+ + Y + L +A IF M
Sbjct: 685 MTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM 720
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 91/210 (43%), Gaps = 2/210 (0%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
EM+ G + +++V G + DA+ + ++ +SD ++ ++ +A G
Sbjct: 334 EMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNG 393
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
E +EI+ M+ + +V AY +I+ LC+ + E + G+ P SY
Sbjct: 394 ESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYN 453
Query: 442 NLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
+L + +L D L L + +PN + +++ +G KA + + M S
Sbjct: 454 SLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKS- 512
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+ I + + N +L SG A++++
Sbjct: 513 KGIVPDVVAGNAVLFGLAKSGRLGMAKRVF 542
>gi|414880641|tpg|DAA57772.1| TPA: hypothetical protein ZEAMMB73_835994 [Zea mays]
Length = 728
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 114/260 (43%), Gaps = 5/260 (1%)
Query: 272 SKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEG 331
SK + A F + G+ D+ + LI + D + KE + +++ EM++ G
Sbjct: 324 SKVSAKDAWEFFKRMNRKGVNWSFDVGAALINIFC-SDGLKKEAL-IIQSEMEKRGIASN 381
Query: 332 KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFR 391
+ ++++ K +E+AE ++ + E T + M+AY++ + +
Sbjct: 382 TSIYETLMKAYCKSNQIEEAEGLFVEMKEKSLQATTTTYNILMDAYSRRLQTEVVESLLL 441
Query: 392 EMQERLGSASVPAYHKIIELLCKAEE-TELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
EMQ+ S +Y+ +I + ++ + E+ G+KPL SY L Y
Sbjct: 442 EMQDLGIRPSARSYNCLISAYGRQKKMSGKAENAFLRMKRDGIKPLSSSYNALLFAYAAN 501
Query: 451 GMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
G+H++ H + + E +P Y L++L+ AG+ EK E + M D+ G
Sbjct: 502 GLHEKAHAIYMDMKREGLKPTLETYTALLDTLRRAGDTEKLMETWKTM-VDEKFGGTRVI 560
Query: 510 CNIILSAYLSSGDFVKAEKI 529
++++ G +++ +
Sbjct: 561 FHMVIDCLAKHGLYLQVRDV 580
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 106/256 (41%), Gaps = 11/256 (4%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K + + +F ++ + + T++IL+ AY S +Q + E S+ M LG +
Sbjct: 394 KSNQIEEAEGLFVEMKEKSLQATTTTYNILMDAY-SRRLQTEVVE--SLLLEMQDLG-IR 449
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P +N L A G K +AE F + G++ Y+ L L +Y N
Sbjct: 450 PSARSYNCLISAY-----GRQKKMSGKAENAFLRMKRDGIKPLSSSYNAL--LFAYAANG 502
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
E+ + +M++ G + E ++L + GD E +TW +++ G F
Sbjct: 503 LHEKAHAIYMDMKREGLKPTLETYTALLDTLRRAGDTEKLMETWKTMVDEKFGGTRVIFH 562
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
++ AK G +++ ++ E + +V Y+ ++ + + L+KE
Sbjct: 563 MVIDCLAKHGLYLQVRDVIYEFGKMGLKPTVMTYNILMNAYGRGGQHYKLPQLLKEMTAL 622
Query: 432 GMKPLMPSYINLTNMY 447
+KP +Y + Y
Sbjct: 623 ELKPDSITYCTMIYAY 638
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 150/345 (43%), Gaps = 14/345 (4%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
M K+++ +F ++ ++G P+ TF+ILI V+G L +A ++ +M + G
Sbjct: 208 MVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLC---VEGNLKKAGNLLKQM-EENG 263
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
+ P +N+L K G K ++ ++ ++ G+E D+ + +++ +
Sbjct: 264 FVPTIVTYNTLLNWYCKK--GRYKAAIELIDY----MICKGIE--ADVCTYNVFIDNLCT 315
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
N + LL K+M++ + +++ KEG + A + + + + D
Sbjct: 316 NHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVT 375
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
+ + + +G+F ++L + M+ + Y ++ LCK E+ EL + L++
Sbjct: 376 YNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 435
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIE 488
M +Y L + GM D + L + + P+ Y + GNI+
Sbjct: 436 VNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIK 495
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A+EI M+ + +N + ++ + G+ +A K+Y +M
Sbjct: 496 SAKEIICRMYRSGLV-LNKIIYSTLIYNFCQHGNVTEAMKVYAVM 539
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESD---NGIPTPAFVYKMEAYAKIGEFMKSLEIFREM 393
S++ + G+++ A++ R+ S N I +Y + + E MK ++ M
Sbjct: 483 SLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMK---VYAVM 539
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
A + ++ LC+ + E + G+ P +Y + N Y ++G
Sbjct: 540 NCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIG-- 597
Query: 454 DRLH-LAFSECLEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC 510
D L+ +F + + KC P+ YG L+ L GN+ +A++ N +H V++
Sbjct: 598 DPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPG-AVDSVMY 656
Query: 511 NIILSAYLSSGDFVKAEKIYDLM 533
N +L+ SG+ +A ++D M
Sbjct: 657 NTLLAETCKSGNLHEAVALFDKM 679
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 92/235 (39%), Gaps = 43/235 (18%)
Query: 338 VLRVCAKEGDVEDAEKTW--LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
++RV KEG ++ A +T+ + L+ + T + K E + SL FREM +
Sbjct: 169 LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSL--FREMSD 226
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL------- 448
+ +V ++ +I LC + +L+K+ E G P + +Y L N Y
Sbjct: 227 KGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKA 286
Query: 449 -------------------------NLGMHDRLHLAFSECLEKCR-----PNRTIYGIYL 478
NL + R A+ L+K R PN Y +
Sbjct: 287 AIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYL-LLKKMRKEMISPNEVTYNTLI 345
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G I A ++FN M S + N + N ++ + GDF +A ++ D M
Sbjct: 346 NGFVKEGKIGVAAQVFNEM-SKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 399
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 135/349 (38%), Gaps = 14/349 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ D + K+ + RD+ D+ ++G +P+ T++IL+ Y G L EA ++ M
Sbjct: 249 ILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCK---MGWLKEAANVIELMT 305
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
Q P +N L L ++ G + + + + E LL + I L W
Sbjct: 306 Q-NNLLPDVWTYNMLINGLCNE-GRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
E LL+ EM + G + +++ KEG ++DA T ++ ES
Sbjct: 364 I------SEAFKLLE-EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSP 416
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
+ + Y K G ++ EM + + I+ LC+ ++ E L+
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNA 484
+ G SY L Y G DR + E EK P+ Y + L
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQC 536
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G E+A N + + T + N IL Y GD KA + ++ M
Sbjct: 537 GKTEQAISKLNELLESGLLPDET-TYNTILHGYCREGDVEKAFQFHNKM 584
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 158/413 (38%), Gaps = 60/413 (14%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
+M Q+ D L + + E + + + D++ N +P ++++ LI
Sbjct: 303 LMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLI------- 355
Query: 230 VQGCLD-----EACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
GCL+ EA + M + G +P HN + + K G + A
Sbjct: 356 -NGCLEWSKISEAFKLLEEMSE-KGVKPNAVTHNIMVK-WYCKEGKM-----DDASNTIT 407
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
+ SG Y+ LI + N+ + ++ EM + + L ++LR +
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTM--DEMGRKNMKMDSVTLNTILRTLCR 465
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
E +E+A K + I ++ + Y K G ++L+++ EM+E+ S
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
Y+ II LC+ +TE S + E +E+G+
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGL------------------------------- 554
Query: 465 EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFV 524
P+ T Y L G++EKA + N M + + + +CNI+L G
Sbjct: 555 ---LPDETTYNTILHGYCREGDVEKAFQFHNKM-VENSFKPDVFTCNILLRGLCMEGVLE 610
Query: 525 KAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIG 577
KA K+++ K I++ L L KE + + NL SE E +G
Sbjct: 611 KALKLFNTWVSKGKAIDTVTYNTLITSLC---KEGRLDDAFNLLSEMEEKELG 660
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 146/344 (42%), Gaps = 32/344 (9%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS--LH 257
R+ F+D I G VP+ TF+I+I Y ++ +A N M G Y P +
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYC---LENKFKDAVEFLNVM---GKYNCSPDNVTY 246
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERIS 317
N++ L K L A + ++ + GL ++ Y+ L++ + + KE +
Sbjct: 247 NTILDTLCKKG------RLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWL-KEAAN 299
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA-----EKTWLRLLESDNGIPTPAFVY 372
+++ Q + + + +C EG +E+A E L+LL + + +
Sbjct: 300 VIELMTQNNLLPDVWTYNMLINGLC-NEGRIEEAFKLRDEMENLKLLP--DVVSYNTLIN 356
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++KI E K LE EM E+ + ++ +++ CK + + + + + E+G
Sbjct: 357 GCLEWSKISEAFKLLE---EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLES-LKNAGNIEKAE 491
P +Y L N Y G + AF E R N + + L + L+ +K E
Sbjct: 414 FSPDCVTYNTLINGYCKAG---NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLE 470
Query: 492 EIFNHMHSDQTIG--VNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
E + + S + G ++ S ++ Y G+ +A K++D M
Sbjct: 471 EAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM 514
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 17/258 (6%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
L QA ++F + + + + +G + + ++D I L EMQ G E K ++
Sbjct: 291 LDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDAI------ALFGEMQIRGVEPDKFIV 344
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM 393
+++L CA+ G +E + W+ +N I A V +E YAK G KSLEIF +
Sbjct: 345 VTLLTGCAQLGALEQGK--WIHNYIDENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGL 402
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
++ ++ II L +T L + G+KP +++ + + + G+
Sbjct: 403 KD----MDTTSWTSIICGLAMNGKTSEALELFEAMQTCGLKPDDITFVAVLSACGHAGLV 458
Query: 454 DRLHLAFSE--CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
+ F + PN YG +++ L AG +++AEE+ + DQ +
Sbjct: 459 EEGRKLFHSMSSIYHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKL-PDQNNEIIVPLYG 517
Query: 512 IILSAYLSSGDFVKAEKI 529
+LSA + G+ E++
Sbjct: 518 ALLSACRTYGNIDMGERL 535
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 126/343 (36%), Gaps = 47/343 (13%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K + K D+ DI G PS +T++ +I Y G + ++ M++ G
Sbjct: 197 KTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVE-AGIS 255
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P N L G A +F + G+ YS L+W + +
Sbjct: 256 PNEVTFNVLVN------GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKV 309
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN-------- 363
+ E + L+ EM+ G L SVL K+G + DAE W+ +E N
Sbjct: 310 E-EGVKLVD-EMKDLGLVPNLATLNSVLNGFCKKGMMTDAEG-WIDSMEQKNVKPNVVTY 366
Query: 364 --------------------------GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQE 395
G+ A +Y + + + G++ + EM+
Sbjct: 367 TILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRM 426
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHD 454
+ A + Y+ +I LC E L+ E + G++P+ +Y + N Y G +
Sbjct: 427 KGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKS 486
Query: 455 RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ K R N Y ++++ L G +E+ E+ N M
Sbjct: 487 AYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEM 529
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 5/198 (2%)
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
F + Y K ++ +F EM+++ +ASV Y ++ LC + E L+ E
Sbjct: 261 FNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMK 320
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNI 487
+ G+ P + + ++ N + GM + + +E+ +PN Y I ++ + +
Sbjct: 321 DLGLVPNLATLNSVLNGFCKKGMMTDAE-GWIDSMEQKNVKPNVVTYTILVDGYRRLDKM 379
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEK 547
+ A + M S + + N R N +++ + +GD+ + D M +K +
Sbjct: 380 KDALAVKEAM-SGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNV 438
Query: 548 LDYVLSLNRKEVKKPVSL 565
L L + + EV+K V L
Sbjct: 439 LIGALCV-KGEVRKAVKL 455
>gi|115465970|ref|NP_001056584.1| Os06g0111300 [Oryza sativa Japonica Group]
gi|113594624|dbj|BAF18498.1| Os06g0111300 [Oryza sativa Japonica Group]
Length = 978
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 128/310 (41%), Gaps = 24/310 (7%)
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G DEA +Y + +LG +P ++ L+ + G + L+QA+ +F TS
Sbjct: 590 EGSTDEAKFLYEHLTELGA---KPD--DTAIATLIVQYGQAQQ--LEQAQKLFETASTS- 641
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV-CAKEGDVE 349
+ +Y+ ++ + E L + + Q G V +S+L K+G +
Sbjct: 642 FPVGGSVYNAMVDALCRCGKTE-EAYRLFMELIDQG--HNGDAVTISILVTHLTKQGKLY 698
Query: 350 DAEKTWLRLLESDNGIPTP--AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
A + R++ S GIP F + Y + G+ K++E+F QE Y
Sbjct: 699 SAVSIYDRMISS--GIPRSMQTFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTYTN 756
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC 467
++ KA + L E G++P S+ + N Y G+H+ + F E +
Sbjct: 757 MLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQKNN 816
Query: 468 R-PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC---NIILSAYLSSGDF 523
P+ Y + + KAEE M T SC N ++SA+L G
Sbjct: 817 HVPDSHTYLALIRAYTEGKCYSKAEEAIQMMLRSNM----TPSCTHFNHLISAFLKEGQI 872
Query: 524 VKAEKIYDLM 533
+A+++Y+ M
Sbjct: 873 DEAQRMYNQM 882
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 129/298 (43%), Gaps = 14/298 (4%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++I+QG +T IL V +L+ QG L A SIY+RMI G PR F
Sbjct: 668 LFMELIDQGHNGDAVTISIL-VTHLTK--QGKLYSAVSIYDRMISSG--IPRSM---QTF 719
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
++S G K L++A +F GL I + Y+ ++ Y SLL
Sbjct: 720 NIMISVYGQGGK--LEKAVEMFSAAQELGLPIDEKTYTNMLSF--YGKAGKHHEASLLFS 775
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKI 380
M++ G GK +++ A G +AE + + ++ +N +P + ++ + AY +
Sbjct: 776 RMKEDGIRPGKISFNTMINAYATSGLHNEAEIIF-QEMQKNNHVPDSHTYLALIRAYTEG 834
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
+ K+ E + M + S ++ +I K + + + + + E G+ +
Sbjct: 835 KCYSKAEEAIQMMLRSNMTPSCTHFNHLISAFLKEGQIDEAQRMYNQMEEAGIPADLACC 894
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
+ M+L+ G D L F +P+ I +++G +A ++ + ++
Sbjct: 895 RTMMRMHLDHGYVDDGILFFETACRLLKPDSFILSAAFHLYEHSGRESEAGDVLDAIN 952
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 110/249 (44%), Gaps = 17/249 (6%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R + E +R++ ++ Q + D + L ++ K+ K I+D +I+ G S
Sbjct: 658 RCGKTEEAYRLFMELIDQ-GHNGDAVTISILVTHLTKQGKLYSAVSIYDRMISSGIPRSM 716
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
TF+I+I Y G L++A +++ +LG + + ++S G K++
Sbjct: 717 QTFNIMISVYGQG---GKLEKAVEMFSAAQELG-----LPIDEKTYTNMLSFYGKAGKHH 768
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+A +F + G+ K ++ +I ++Y + ++ +EMQ+
Sbjct: 769 --EASLLFSRMKEDGIRPGKISFNTMI--NAYATSGLHNEAEIIFQEMQKNNHVPDSHTY 824
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
L+++R + AE+ +L S+ F + + A+ K G+ ++ ++ +M+E
Sbjct: 825 LALIRAYTEGKCYSKAEEAIQMMLRSNMTPSCTHFNHLISAFLKEGQIDEAQRMYNQMEE 884
Query: 396 RLGSASVPA 404
A +PA
Sbjct: 885 ----AGIPA 889
>gi|449442212|ref|XP_004138876.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g24830-like [Cucumis sativus]
gi|449499387|ref|XP_004160802.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g24830-like [Cucumis sativus]
Length = 633
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 2/180 (1%)
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G+F +L + R++ + + + ++ ++ LC + E+ +SL +E +E G P +Y
Sbjct: 148 GKFGAALLLRRKLIKEGFAVDLVTHNYLLNGLCINCDMEMADSLFREMLEMGPSPNCATY 207
Query: 441 -INLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
I + L + M L L ++ RP+R Y I L +L G + A ++ +
Sbjct: 208 NIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRITYNILLHALCKRGILVDARKLLEVILG 267
Query: 500 DQTIGVNTR-SCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKE 558
D + + I++ + SGD ++A ++D M KK EI+ L + L LN+ +
Sbjct: 268 DDIKTTDDAITSTILMDSCFKSGDTIQAVALWDKMVEKKTEIDVVAYNVLIHGLCLNQDK 327
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 97/225 (43%), Gaps = 5/225 (2%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
++ A+ +F +L G Y+ +I + N+DK L M +G +
Sbjct: 185 MEMADSLFREMLEMGPSPNCATYNIIIKGFCLRMNMDKALD--LFYTMVNSGIRPSRITY 242
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM 393
+L K G + DA K +L D A M++ K G+ ++++ ++ +M
Sbjct: 243 NILLHALCKRGILVDARKLLEVILGDDIKTTDDAITSTILMDSCFKSGDTIQAVALWDKM 302
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-M 452
E+ V AY+ +I LC ++ ++ + + ++ G P + +Y L + + G
Sbjct: 303 VEKKTEIDVVAYNVLIHGLCLNQDKKIALGYVADMLKRGFLPDIFTYNTLISAFCKEGQF 362
Query: 453 HDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
D ++ P++ +Y + +++L G+ KA+E + M
Sbjct: 363 GDAYYIHDVMSRMGVSPDQILYKMIIQALCMNGDAIKADEFLHSM 407
>gi|218202055|gb|EEC84482.1| hypothetical protein OsI_31142 [Oryza sativa Indica Group]
Length = 586
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 151/386 (39%), Gaps = 27/386 (6%)
Query: 119 LCKELPSHKGG--TLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWY 176
LC+ L +G L L WL D + C + F ++ + +
Sbjct: 68 LCRVLSDFRGPRHDLPAALRGFAPWLTPGDAAAVLRRCRHLPLPSLRFFLFAGELPGFSH 127
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMT---FHILIVAYLSAPVQGC 233
D L LA+ + R F R + D+ PS ++ F +L AY A +
Sbjct: 128 HPDSLLV--LANSLAGARLFPLLRSLLSDL-----PPSALSRGLFPLLFRAYSRARLP-- 178
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
++A ++ M G + P + +SL AL GL +Y E F ++ ++
Sbjct: 179 -EDAIRAFSSMAGFG-FPPTIADFHSLLFALSRN--GLVEY----GERFFRES-SAQFDV 229
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
Y+ I + + E L EM + G E V +++ + GD+ A++
Sbjct: 230 SAKAYT--ILISGWAVVKKPENARSLFDEMVERGVELDVHVYNALIDALCRGGDITSAQE 287
Query: 354 TWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
+ +S +P A + + A + +L + M + +V Y+ +I LL
Sbjct: 288 QLSNMQKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYNAVIRLL 347
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNR 471
C E +++ E G KP + SY L N + L ++ L L E C P+R
Sbjct: 348 CDLGEINEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKELCPPDR 407
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHM 497
Y + L+ L G + A E+++ M
Sbjct: 408 HSYNMLLKMLIGVGRFDTAIEVWDGM 433
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 150/348 (43%), Gaps = 24/348 (6%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K +F K + ++ + P +T ++++ A A G + A ++ + M+ G +
Sbjct: 107 KALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRA---GDAEAAMALVDSMVS-KGLK 162
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P +NS+ + L + G K A +F + G + D+ S I + +
Sbjct: 163 PGIVTYNSVLKGL-CRSGMWDK-----AWEVFKEMDDFG--VAPDVRSFTILIGGFCRVG 214
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
+ E + KEM+ G + ++ + A+ G ++ A +LR + +P +
Sbjct: 215 EIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHA-MAYLREMRCFGLVPD-GVI 272
Query: 372 YKM--EAYAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTESLMK 426
Y M + + G +L + EM +G +P Y+ ++ LCK E L+
Sbjct: 273 YTMVIGGFCRAGLMSDALRVRDEM---VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLN 329
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAG 485
E E G+ P + ++ L + Y G D+ F L ++ RP+ Y ++ + G
Sbjct: 330 EMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQG 389
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+++KA ++++ MHS + I N + +I++ ++ G A D M
Sbjct: 390 DLDKANDLWDDMHS-REIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 436
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 65/379 (17%), Positives = 156/379 (41%), Gaps = 15/379 (3%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R+ E E ++Y+ M + + D + L + K ++ G VP
Sbjct: 212 RVGEIEEALKIYKEM-RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG 270
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+ + ++I + A G + +A + + M+ G P +N+L L +
Sbjct: 271 VIYTMVIGGFCRA---GLMSDALRVRDEMVGCGCL-PDVVTYNTLLNGLCKE------RR 320
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
L AE + + + G+ ++ LI + + +DK + L + Q
Sbjct: 321 LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKA-LQLFDTMLNQR-LRPDIVTY 378
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
+++ ++GD++ A W + + + ++++ + G+ + EM
Sbjct: 379 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 438
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHD 454
+ ++ Y+ II+ C++ + +++ + + P + +Y L + Y+ MHD
Sbjct: 439 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHD 498
Query: 455 RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
L EK +P+ Y + + GN+++A IF M + + I + + ++
Sbjct: 499 AFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA-KGIEPDRYTYMSMI 557
Query: 515 SAYLSSGDFVKAEKIYDLM 533
+ ++++G+ +A +++D M
Sbjct: 558 NGHVTAGNSKEAFQLHDEM 576
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
A + + S++ + T + Y K EF K + EM++R V ++ +++
Sbjct: 79 AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 138
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRP 469
+A + E +L+ V G+KP + +Y ++ GM D+ F E + P
Sbjct: 139 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 198
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ + I + G IE+A +I+ M
Sbjct: 199 DVRSFTILIGGFCRVGEIEEALKIYKEM 226
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK--EGDVEDAEK 353
+ Y+ I +H+Y ++ +++ + EM++ +V+ + V A+ GD E A
Sbjct: 94 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVF--PDVVTHNVMVDARFRAGDAEAA-- 149
Query: 354 TWLRLLES--DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
+ L++S G+ Y ++ + G + K+ E+F+EM + + V ++ +I
Sbjct: 150 --MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILI 207
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-- 467
C+ E E + KE G+KP + S+ L ++ G D E +C
Sbjct: 208 GGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLRE--MRCFG 265
Query: 468 -RPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
P+ IY + + AG + A + + M
Sbjct: 266 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 296
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 135/324 (41%), Gaps = 20/324 (6%)
Query: 178 FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEA 237
D L T + D + K K + ++F I+ VP+ +T+ L+ + G ++ A
Sbjct: 339 IDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKV---GDVEFA 395
Query: 238 CSIYNRMIQLGGYQPRPSLHNSL-FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
++ +M + L N + F ++++ G K L +A + ++ + I +
Sbjct: 396 ETVLQKM------EKEHVLPNVVTFSSIIN--GYAKKGMLNKAVEVLRKMVQ--MNIMPN 445
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
++ I L Y E + KEM+ G EE + +L + G +++A+
Sbjct: 446 VFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIK 505
Query: 357 RLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCK 414
+L GI F Y M+ Y K G +L + +EM E+ V AY+ + + L +
Sbjct: 506 DILSK--GIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLR 563
Query: 415 AEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTI 473
+ E +S+ +E G+ P +Y ++ N Y G + L L PN
Sbjct: 564 LGKYE-PKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVT 622
Query: 474 YGIYLESLKNAGNIEKAEEIFNHM 497
Y I + L G IEK + + M
Sbjct: 623 YNILIGGLCKTGAIEKVISVLHEM 646
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 83/176 (47%), Gaps = 3/176 (1%)
Query: 365 IPTPAF-VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
+PTP + ++AY++ + L+I +++ + + + Y+ +I +LC+ T+
Sbjct: 652 VPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANV 711
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLK 482
++ E V G+ + +Y L Y ++ +S+ L PN T Y LE L
Sbjct: 712 VLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLS 771
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKY 538
G + A+++ + M ++ + N + NI++S + G+ + K+Y M K +
Sbjct: 772 TNGLMRDADKLVSEMR-ERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGF 826
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 118/276 (42%), Gaps = 48/276 (17%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ +G VP T+ LI + QG +++A +++ M L G P ++N+L
Sbjct: 347 VFSELKEKGLVPDVFTYSSLISGFCK---QGEVEKAFELHDEMC-LKGIAPNIFIYNALV 402
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L K G + Q+A +F + GLE YS +I + +N+ E SL
Sbjct: 403 DGLC-KSGDI-----QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENV-AEAFSLFH- 454
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
EM G + V +++ C KEGD+E
Sbjct: 455 EMPSKGVQPHSFVYNALVHGCCKEGDME-------------------------------- 482
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
K++ +FREM ++ G A+ +++ +I+ CK+ + + L +E + + P +Y
Sbjct: 483 ---KAMNLFREMLQK-GFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 538
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIY 477
+ + + G + +L F E E+ T++ ++
Sbjct: 539 TVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALF 574
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 140/355 (39%), Gaps = 24/355 (6%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
K K +I +I G P+ TF +LI Y G A + + M + P
Sbjct: 95 KMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMG---RALELLDEM-EKRNLVPSA 150
Query: 255 SLHNSLFRALV-SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
+ ++ L K L+ L++ F SGL+ +YS LI ++ + I++
Sbjct: 151 VSYGAMINGLCHCKDLSLANKLLEKMTF-------SGLKPNVVVYSTLIMGYASEGRIEE 203
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL----RLLESDNGIPTPA 369
R L M +G +++ +K G +E+A L R L+ D + A
Sbjct: 204 AR--RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD-AVTFGA 260
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
F+ Y+K G+ ++ + F EM + + P Y +I KA S+ +
Sbjct: 261 FIL---GYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLH 317
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIE 488
G+ P + + + L G FSE EK P+ Y + G +E
Sbjct: 318 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 377
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESA 543
KA E+ + M + I N N ++ SGD +A K++D M K E +S
Sbjct: 378 KAFELHDEM-CLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 431
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 104/259 (40%), Gaps = 4/259 (1%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+ +A+ F + +GL+ + S LI + +ID+ + +K M G
Sbjct: 26 MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE--VLRIKDVMVSCGIPINLITY 83
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
++ K G +E A + ++ + F +E Y + ++LE+ EM++
Sbjct: 84 NVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 143
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHD 454
R S +Y +I LC ++ L L+++ +G+KP + Y L Y + G + +
Sbjct: 144 RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEE 203
Query: 455 RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
L P+ Y + L AG +E+A + + + + + +
Sbjct: 204 ARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG-RGLKPDAVTFGAFI 262
Query: 515 SAYLSSGDFVKAEKIYDLM 533
Y +G +A K +D M
Sbjct: 263 LGYSKTGKMTEAAKYFDEM 281
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 117/320 (36%), Gaps = 33/320 (10%)
Query: 159 ENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTF 218
E E F +++ M + F + L D + K + R +FD + +G P +T+
Sbjct: 375 EVEKAFELHDEMCLKGIAPNIF-IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 433
Query: 219 HILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQ 278
+I Y + + EA S+++ M G QP ++N+L K G + K
Sbjct: 434 STMIDGYCKSEN---VAEAFSLFHEMPS-KGVQPHSFVYNALVHG-CCKEGDMEK----- 483
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
A +F +L G + + Y + + S L +EM +V
Sbjct: 484 AMNLFREMLQKGFATTLSFNT---LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 540
Query: 339 LRVCAKEGDVEDAEKTWLRLLESD---------------NGIPTPAFVYKMEAYAKIGEF 383
+ K G +E+A + + E + G+ Y + YA E
Sbjct: 541 IDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKED 600
Query: 384 MKSLEIFREMQERLGSASVPA---YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
+E F+ E +G + + +I LCK E+ L+ E E G+KP + +
Sbjct: 601 -NLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAAC 659
Query: 441 INLTNMYLNLGMHDRLHLAF 460
L + G D F
Sbjct: 660 STLVRSFHEAGKMDEATRVF 679
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 160/391 (40%), Gaps = 22/391 (5%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
++L + R + +V+E M+ H ++ T L + + K R ++ ++
Sbjct: 156 SWLVIFYANSRMTQDAIQVFE-HMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMV 214
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
G VP+ F++LI A + G +++A + N M + P +N+L +L K
Sbjct: 215 RVGVVPNIHIFNVLIHACCKS---GDVEKAEQLLNEMESRFIF-PDLFTYNTLI-SLYCK 269
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
G +Y +A I + G+ Y+ LI+ + N D E L++ M+ G
Sbjct: 270 KG---MHY--EALGIQDRMERGGVSPDIVTYNSLIYGFCREVN-DLEEALRLREVMEVEG 323
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWL----RLLESDNGIPTPAFVYKMEAYAKIGEF 383
G S+LR +EG ++DA + R +E DN + AY KIG+
Sbjct: 324 LHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTL----INAYCKIGDM 379
Query: 384 MKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINL 443
++++ ++M E + +I CK E + + + E ++ G P +Y L
Sbjct: 380 GSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWL 439
Query: 444 TNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQT 502
+ Y + + + E K + ++Y + L IE AE IF M
Sbjct: 440 VDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGM 499
Query: 503 IGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G ++ + AY +G + A + D M
Sbjct: 500 KG-DSVVYTSLAYAYFKAGKAIAASDMLDEM 529
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 81/189 (42%), Gaps = 5/189 (2%)
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK- 373
+I L EM+ G E + +V+ C +EG +++A K + RL G F Y
Sbjct: 263 KILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARL--KSEGYVAGTFTYNS 320
Query: 374 -MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++ + K G + ++L I +EM++ + Y++++ +A E + + G
Sbjct: 321 LLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKG 380
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAE 491
+ P +Y + N Y G D+ F + E C PN Y L L +E+
Sbjct: 381 IMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMI 440
Query: 492 EIFNHMHSD 500
++ M S+
Sbjct: 441 DMLCDMRSN 449
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 141/340 (41%), Gaps = 58/340 (17%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ + G P+ TF+ LI AY G + +Y MI+ G+ P + +N+L
Sbjct: 477 VFREMKSCGFEPNRDTFNALIGAYGRC---GSQIDVVKMYEEMIK-AGFTPCVTTYNALL 532
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLE------------------------IQKDI 297
AL + + AE + ++ + G + I+++I
Sbjct: 533 NALARRGD------WEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEI 586
Query: 298 YSGLI---WL---HSYQDNIDKERISLLKKEMQQ---AGFEEGKEVLLSVLRVCAKEGDV 348
Y+G I W+ N + + +++ Q+ G++ + S+L + AK +
Sbjct: 587 YNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKN-KM 645
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
D LRL+ ++G+ Y M+ YA+ GE K EI + +Q+ G + +Y+
Sbjct: 646 YDRAHEMLRLIR-ESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYN 704
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE- 465
+I+ C+ + + E +G++P + +Y Y GM + S ++
Sbjct: 705 TVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQH 764
Query: 466 KCRPNRTIYGI----------YLESLKNAGNIEKAEEIFN 495
CRPN Y I Y E++ NI + ++ F+
Sbjct: 765 DCRPNELTYKIVVDGYCKGKKYKEAMDFVSNITEMDKSFD 804
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 8/171 (4%)
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
GI A Y + AY K G+ K+L FR+M+E +V Y+ I+ +L K E
Sbjct: 380 GIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEM 439
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLE 479
++ + G P ++ + M N GMH ++ F E ++ C PNR + +
Sbjct: 440 IDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFRE-MKSCGFEPNRDTFNALIG 498
Query: 480 SLKNAGNIEKAEEIFNHM-HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
+ G+ +++ M + T V T N +L+A GD+ AE +
Sbjct: 499 AYGRCGSQIDVVKMYEEMIKAGFTPCVTTY--NALLNALARRGDWEAAESV 547
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 12/266 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L GK +++ I ++ P +T++ L+ AY+ A G +E + MI
Sbjct: 321 LLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRA---GFHEEGADFIDTMI 377
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ G P + ++ A K G K A F + SG Y+ ++ +
Sbjct: 378 R-KGIMPNAITYTTVINAY-GKAGKEDK-----ALSFFRQMKESGCVPNVCTYNAILGML 430
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+ ++ E I +L +M+ G ++L +C +G + + + +
Sbjct: 431 GKKSRLE-EMIDMLC-DMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEP 488
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
F + AY + G + ++++ EM + + V Y+ ++ L + + E ES++
Sbjct: 489 NRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVI 548
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLG 451
+ G KP SY + N Y G
Sbjct: 549 LDMKSKGFKPNETSYSLMLNCYAKGG 574
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 118/288 (40%), Gaps = 32/288 (11%)
Query: 263 ALVSKPGGLSKYY--LQQAEFIFHNLLTSGLEIQKDIYSGL---------------IWLH 305
A + G SK + ++ + + NL+ G D+ +G+ + +
Sbjct: 152 ASCERMGDASKVFDEMRDPDVVVWNLMIRGFCKMGDLETGMKVFGQMKERTVVSWNLMMS 211
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
N +E+ L EM + GFE L++VL VCA+ G V+ E W+ + G
Sbjct: 212 CLAKNNKEEKALELFNEMLEQGFEPDDASLVTVLPVCARLGAVDIGE--WIHSYANSKGF 269
Query: 366 PTPAFVYK---MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
++ Y K G + IF +M S +V +++ +I L E E+
Sbjct: 270 LQDTINVGNSLVDFYCKCGNLQAAWSIFNDM----ASKNVVSWNAMISGLAYNGEGEVGV 325
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGIYLES 480
+L +E V G +P +++ + ++G+ DR F+ K + P YG ++
Sbjct: 326 NLFEEMVHGGFEPNDSTFVGVLACCAHVGLVDRGRDLFASMSVKFKVSPKLEHYGCVVDL 385
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
L G++ +A ++ M T + +LSA + GD AE
Sbjct: 386 LGRCGHVREARDLITSMPLKPTAAL----WGALLSACRTYGDREIAEN 429
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 88/215 (40%), Gaps = 15/215 (6%)
Query: 327 GFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKS 386
GF V ++ L V A + DA K + + + D + + + K+G+
Sbjct: 136 GFTRHASVRVAALEVYASCERMGDASKVFDEMRDPD----VVVWNLMIRGFCKMGDLETG 191
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNM 446
+++F +M+ER +V +++ ++ L K + E L E +E G +P S + + +
Sbjct: 192 MKVFGQMKER----TVVSWNLMMSCLAKNNKEEKALELFNEMLEQGFEPDDASLVTVLPV 247
Query: 447 YLNLGMHDRLHLAFSECLEKCRPNRTIY--GIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
LG D S K TI ++ GN++ A IFN M S
Sbjct: 248 CARLGAVDIGEWIHSYANSKGFLQDTINVGNSLVDFYCKCGNLQAAWSIFNDMASK---- 303
Query: 505 VNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
N S N ++S +G+ +++ M +E
Sbjct: 304 -NVVSWNAMISGLAYNGEGEVGVNLFEEMVHGGFE 337
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 130/289 (44%), Gaps = 22/289 (7%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+FD++ G +P+ +T+ ++ ++S +G L A +++ I G+ P + + L
Sbjct: 180 VFDEMPTMGMIPNLVTYTTILGGFVS---RGDLVNAEKVFSE-ISDKGWLPDATTYTVLM 235
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
K G LS A + N+ +G+E + Y +I + + + R L
Sbjct: 236 VGY-CKQGRLS-----DAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARN--LID 287
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAY-AKI 380
+M F + V+ V ++G VE+A W R+LE N +P A + + + K
Sbjct: 288 DMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEK-NCLPDNAIMSTLIHWLCKE 346
Query: 381 GEFMKSLEIFREMQERLGSASVPA---YHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
G+ ++ ++F E ++ ++P+ Y+ +I +C+ E L + VE +P
Sbjct: 347 GKVWEARKLFDEFEQ----GTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNA 402
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAG 485
+Y L ++ G+ E L+ C PN++ Y + +E L+ +G
Sbjct: 403 FTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESG 451
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 119/311 (38%), Gaps = 28/311 (9%)
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
A + R+ + QP L N+L V +K Y +L+ S L+ KD
Sbjct: 105 ALKTFTRIKEEFSMQPSVKLLNTLLNVFVQ-----NKRY---------HLVGSTLKNCKD 150
Query: 297 IYSGLIWLHSYQDNI-------DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
Y L + S+ I D E + EM G ++L GD+
Sbjct: 151 KYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLV 210
Query: 350 DAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
+AEK + + SD G A Y M Y K G ++++ M+ + Y
Sbjct: 211 NAEKVFSEI--SDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGV 268
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK- 466
+I+ CK +++ +L+ + ++ P + ++ G + + LEK
Sbjct: 269 MIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKN 328
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
C P+ I + L G + +A ++F+ + T N +++ G+ +A
Sbjct: 329 CLPDNAIMSTLIHWLCKEGKVWEARKLFDEFEQGTIPSLMTY--NTLIAGMCERGELNEA 386
Query: 527 EKIYDLMCLKK 537
+++D M K+
Sbjct: 387 GRLWDDMVEKR 397
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 130/340 (38%), Gaps = 48/340 (14%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
M + K A R++FD+++ +G P+ +TF+ L+ A L+ A ++ M + G
Sbjct: 124 MIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASD---LNNANALRGLMAK-AG 179
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
P + + + L K G +Q A +F + GL + + LI H +
Sbjct: 180 IAPDVYTYGAFIQGLC-KTG-----RIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEG 233
Query: 310 NI---------------------------------DKERISLLKKEMQQAGFEEGKEVLL 336
++ D + + + +EM++ G + K
Sbjct: 234 DVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYT 293
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQ 394
+++ C KEG+++ A + + SD G+ Y + +K G + + I EM
Sbjct: 294 TLIDGCCKEGELDTAMEMKQEM--SDEGVALDDVTYTALISGLSKAGRSVDAERILCEMM 351
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
E Y +I+ CK + + +KE G P + +Y + N + +LG
Sbjct: 352 EAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMK 411
Query: 455 RLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEI 493
+ + L PN Y I L+ G + EE+
Sbjct: 412 NADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEEL 451
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 113/289 (39%), Gaps = 11/289 (3%)
Query: 236 EACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQK 295
EA + Y ++ G P N L R ++ + G L+ A +F +L G +Q
Sbjct: 97 EAYAFYLHLLD-AGVPPEARQFNMLMRDMI-RSGKLA-----SARNVFDEMLRRG--VQP 147
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
+ + + D + L+ M +AG + ++ K G ++DA + +
Sbjct: 148 TVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMF 207
Query: 356 LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
+ E T ++A+ K G+ LE+ EM R A + AY+ ++ C+
Sbjct: 208 EEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRV 267
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTIY 474
+ + +++E + G+KP +Y L + G D + + E + Y
Sbjct: 268 RDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTY 327
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDF 523
+ L AG AE I M NT + +++ A+ +GD
Sbjct: 328 TALISGLSKAGRSVDAERILCEMMEAGLQPDNT-TYTMVIDAFCKNGDV 375
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 127/298 (42%), Gaps = 17/298 (5%)
Query: 205 DIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL 264
D++ +G PS + F+ +I AY A ++ D+A Y M+ G P PS +SL L
Sbjct: 256 DMLEKGLSPSIIAFNSVIAAYSQAGLE---DKAFEAYKLMVHFG-LTPSPSTCSSLLMGL 311
Query: 265 VSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQ 324
S G LQ+A + ++ GL + ++ + L + D L EM+
Sbjct: 312 -SING-----RLQEATELIGQMIEKGLSVNNMAFT--VLLDKFFKRGDVVGAQSLWGEME 363
Query: 325 QAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGE 382
+ G + + +K+G VE+A +L +L G+ F Y + + K G+
Sbjct: 364 RRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRK--GLIPNNFAYNSLICGFCKCGK 421
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
++L++ + M+ R + + II LCK ++ + +TG+ P + +Y
Sbjct: 422 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNT 481
Query: 443 LTNMYLN-LGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
L N Y M + +L P+ T Y I + ++ + +A + + + S
Sbjct: 482 LINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVS 539
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 139/343 (40%), Gaps = 14/343 (4%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K R+ + +++++ +G P +TF+IL+ S + +E + I + G
Sbjct: 173 KMREIDQANMLYEEMRKKGIAPDGITFNILV----SGHYKYGREEDGDRLLKDISVLGLL 228
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P SL + +S G L +A ++L GL ++ +I +S
Sbjct: 229 PDRSLFD------ISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLE 282
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
DK + K M G S+L + G +++A + +++E + AF
Sbjct: 283 DKAFEAY--KLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFT 340
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
++ + K G+ + + ++ EM+ R V A+ I+ L K E ++ E +
Sbjct: 341 VLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRK 400
Query: 432 GMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKA 490
G+ P +Y +L + G +++ L L P+ + + L G + A
Sbjct: 401 GLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSA 460
Query: 491 EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+F MH + + + N +++ Y + D V A+ + + M
Sbjct: 461 INVFMDMH-QTGLSPDIITYNTLINGYCKAFDMVNADNLVNRM 502
>gi|242047208|ref|XP_002461350.1| hypothetical protein SORBIDRAFT_02g001400 [Sorghum bicolor]
gi|241924727|gb|EER97871.1| hypothetical protein SORBIDRAFT_02g001400 [Sorghum bicolor]
Length = 560
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 157/378 (41%), Gaps = 25/378 (6%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
+ +V+E + +Q +Y KL +G+ + A+ +FD+++ QG P+ +
Sbjct: 187 QEALQVFEMLKEQPFYHPKEGTFMKLIVLLGRSGQPARAHQLFDEMLQQGCQPTPGLYTA 246
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV--SKPGGLSKYYLQQ 278
LI AY + G LD+A + N M QP ++++ +A V ++ + Y
Sbjct: 247 LIGAYCRS---GLLDDALQLLNDMKGSPLCQPDVYTYSTIIKACVDATRFDLIDVMYKDM 303
Query: 279 AE-FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
AE I N +T + + +G + D+++K +L + + +
Sbjct: 304 AERSIAPNTVTQNIVLSGYGKAGRL------DDMEK----VLSDMLDSTACKPDVWTMNI 353
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
+L + +G VE EK W S P T + AY K + K + M++
Sbjct: 354 ILSLFGNKGQVELMEK-WYEKFRSYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKL 412
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
+ Y+ +IE +A + + E + GMKP ++ L N + G ++
Sbjct: 413 AFPWTTATYNNVIEAFAEAGDAKNMEHTFNQMRSEGMKPDTKTFCCLINGFSKAGQFHKV 472
Query: 457 --HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
+ +E L+ N + + L + A ++ + E +F HM Q + + +I++
Sbjct: 473 VGMVKLAERLD-VPANTSFHNAILGACARADDLMEMERVFRHMKHTQ-CDPDAVTYSILV 530
Query: 515 SAYLSSGDFVKAEKIYDL 532
AY G +KIY L
Sbjct: 531 EAYRKEG---MTDKIYAL 545
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 112/265 (42%), Gaps = 19/265 (7%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN--- 258
++ D+ + P+ +T +I++ Y A G LD+ + + M+ +P N
Sbjct: 299 MYKDMAERSIAPNTVTQNIVLSGYGKA---GRLDDMEKVLSDMLDSTACKPDVWTMNIIL 355
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
SLF +K ++ E + + G+E + + LI + + DK +S
Sbjct: 356 SLFG---------NKGQVELMEKWYEKFRSYGIEPETRTLNILIGAYGKKRMYDK--MSA 404
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA 378
+ + M++ F +V+ A+ GD ++ E T+ ++ T F + ++
Sbjct: 405 VMEYMRKLAFPWTTATYNNVIEAFAEAGDAKNMEHTFNQMRSEGMKPDTKTFCCLINGFS 464
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC-KAEETELTESLMKEFVETGMKPLM 437
K G+F K + + + + ERL + ++H I C +A++ E + + T P
Sbjct: 465 KAGQFHKVVGMVK-LAERLDVPANTSFHNAILGACARADDLMEMERVFRHMKHTQCDPDA 523
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSE 462
+Y L Y GM D+++ E
Sbjct: 524 VTYSILVEAYRKEGMTDKIYALHQE 548
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 81/189 (42%), Gaps = 5/189 (2%)
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK- 373
+I L EM+ G E + +V+ C +EG +++A K + RL G F Y
Sbjct: 263 KILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARL--KSEGYVAGTFTYNS 320
Query: 374 -MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++ + K G + ++L I +EM++ + Y++++ +A E + + G
Sbjct: 321 LLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKG 380
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAE 491
+ P +Y + N Y G D+ F + E C PN Y L L +E+
Sbjct: 381 IMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMI 440
Query: 492 EIFNHMHSD 500
++ M S+
Sbjct: 441 DMLCDMRSN 449
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 141/340 (41%), Gaps = 58/340 (17%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ + G P+ TF+ LI AY G + +Y MI+ G+ P + +N+L
Sbjct: 477 VFREMKSCGFEPNRDTFNALIGAYGRC---GSQIDVVKMYEEMIK-AGFTPCVTTYNALL 532
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLE------------------------IQKDI 297
AL + + AE + ++ + G + I+++I
Sbjct: 533 NALARRGD------WEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEI 586
Query: 298 YSGLI---WL---HSYQDNIDKERISLLKKEMQQ---AGFEEGKEVLLSVLRVCAKEGDV 348
Y+G I W+ N + + +++ Q+ G++ + S+L + AK +
Sbjct: 587 YNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKN-KM 645
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
D LRL+ ++G+ Y M+ YA+ GE K EI + +Q+ G + +Y+
Sbjct: 646 YDRAHEMLRLIR-ESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYN 704
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE- 465
+I+ C+ + + E +G++P + +Y Y GM + S ++
Sbjct: 705 TVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQH 764
Query: 466 KCRPNRTIYGI----------YLESLKNAGNIEKAEEIFN 495
CRPN Y I Y E++ NI + ++ F+
Sbjct: 765 DCRPNELTYKIVVDGYCKGKKYKEAMDFVSNITEMDKSFD 804
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 8/171 (4%)
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
GI A Y + AY K G+ K+L FR+M+E +V Y+ I+ +L K E
Sbjct: 380 GIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEM 439
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLE 479
++ + G P ++ + M N GMH ++ F E ++ C PNR + +
Sbjct: 440 IDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFRE-MKSCGFEPNRDTFNALIG 498
Query: 480 SLKNAGNIEKAEEIFNHM-HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
+ G+ +++ M + T V T N +L+A GD+ AE +
Sbjct: 499 AYGRCGSQIDVVKMYEEMIKAGFTPCVTTY--NALLNALARRGDWEAAESV 547
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 12/266 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L GK +++ I ++ P +T++ L+ AY+ A G +E + MI
Sbjct: 321 LLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRA---GFHEEGADFIDTMI 377
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ G P + ++ A K G K A F + SG Y+ ++ +
Sbjct: 378 R-KGIMPNAITYTTVINAY-GKAGKEDK-----ALSFFRQMKESGCVPNVCTYNAILGML 430
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+ ++ E I +L +M+ G ++L +C +G + + + +
Sbjct: 431 GKKSRLE-EMIDMLC-DMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEP 488
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
F + AY + G + ++++ EM + + V Y+ ++ L + + E ES++
Sbjct: 489 NRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVI 548
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLG 451
+ G KP SY + N Y G
Sbjct: 549 LDMKSKGFKPNETSYSLMLNCYAKGG 574
>gi|357120906|ref|XP_003562165.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Brachypodium distachyon]
Length = 529
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 9/184 (4%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEA 376
L MQ +G E VL+SVL CA G +E + W+ +G+ A V ++
Sbjct: 259 LFSAMQASGVEPNANVLVSVLGCCAALGALE--QGAWVHAYIDKHGVAMNALVVTALVDM 316
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
Y K G K+ +F + + G A + +++ ++ L + + +L E G+ P
Sbjct: 317 YCKCGSIHKARHVFDASRSQ-GLAKLSSWNAMMLGLAVHGQCQEALALFSELETYGLSPD 375
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLEK---CRPNRTIYGIYLESLKNAGNIEKAEEI 493
++I + Y + GM D FS +E+ P YG +++L AG + +AE++
Sbjct: 376 NVTFITILMAYGHSGMADEAKALFSA-MEREYAVTPGIEHYGCLVDALARAGRLGEAEDV 434
Query: 494 FNHM 497
M
Sbjct: 435 IRTM 438
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 135/297 (45%), Gaps = 17/297 (5%)
Query: 206 IINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALV 265
I+++G P+ +T+ LI + L ++G + EA ++ +++ G Y+P +N L L
Sbjct: 138 IVDKGFSPNVITYSTLI-SGLCRELRG-VSEALKLFGSVLKQG-YEPEVPTYNILIDGL- 193
Query: 266 SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
L + + +A +F L+ GLE Y+ +++ E L+ K+M +
Sbjct: 194 -----LKEDRVNEAFELFSGLVKHGLEPDAITYT--VFIDGLCKAGRVEDALLMLKDMDE 246
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFM 384
G +V+ KE V++AE L +E+ P +F + + G++
Sbjct: 247 KGCVPDVVSHNAVINGLCKEKRVDEAE-VLLSGMEAKGCSPNAISFNTLICGQCRAGKWK 305
Query: 385 KSLEIFREMQERLGSASVPAYHKIIELLCKA-EETELTE--SLMKEFVETGMKPLMPSYI 441
K++ F+EM +R +V Y+ +++ LCKA +E + E +L +E G P + +Y
Sbjct: 306 KAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYS 365
Query: 442 NLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
L + G + D L + + C PN Y + L +++A E+F M
Sbjct: 366 ALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAM 422
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 139/339 (41%), Gaps = 25/339 (7%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
+YE M++ Y D L K + + IFD + +G VP +T++ LI +
Sbjct: 32 LYERMIKA-GYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGF 90
Query: 226 LSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH- 284
A LDEA I RM+ P +NSL L K G + + + + F
Sbjct: 91 CKADK---LDEAQRILQRMVS-ENLVPDVVTYNSLVNGL-CKNGRVDEARMLIVDKGFSP 145
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
N++T YS LI + E + L ++Q G+E ++ K
Sbjct: 146 NVIT---------YSTLISGLCRELRGVSEALKLFGSVLKQ-GYEPEVPTYNILIDGLLK 195
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASV 402
E V +A + + L++ +G+ A Y ++ K G +L + ++M E+ V
Sbjct: 196 EDRVNEAFELFSGLVK--HGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDV 253
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
+++ +I LCK + + E L+ G P S+ L G + F E
Sbjct: 254 VSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKE 313
Query: 463 CLEK-CRPNRTIYGIYLESLKNA---GNIEKAEEIFNHM 497
L++ +P Y I ++ L A G I++A +F+ M
Sbjct: 314 MLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAM 352
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 69/159 (43%), Gaps = 2/159 (1%)
Query: 323 MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGE 382
M++ GF + ++L G + DA+ + R++++ + + + K+GE
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
++L+IF +R V Y+ +I CKA++ + + +++ V + P + +Y +
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 443 LTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESL 481
L N G D + + + PN Y + L
Sbjct: 121 LVNGLCKNGRVDEARMLIVD--KGFSPNVITYSTLISGL 157
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 143/337 (42%), Gaps = 22/337 (6%)
Query: 167 YEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYL 226
+ W +Q + + + L + +GK R+F ++ D++ Q ++ + TF ++ Y+
Sbjct: 107 FRWAEKQQGFNHNTEIFHALIEALGKIRQFKMIWNLVDEM-KQRKLLNGDTFSLIARRYV 165
Query: 227 SAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNL 286
A V + EA + RM + G +P+ S N L L SK+++++A+ +F +
Sbjct: 166 RAKV---IKEALKTFERMEKYG-LKPQISDFNKLIDVLCK-----SKFHVEKAQELFDKM 216
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEG 346
LE Y+ LI S Q N+ K + + +EM+ GF+ ++ K
Sbjct: 217 RQWNLEPNLKSYTILIEGWSQQQNLLK--VDEVCREMKDDGFQPDVVTYGIIINAYCKAK 274
Query: 347 DVEDAEKTWLRLLESDNGIPTP----AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
++A + +L S N P+P F+ + +++ E + E F + +
Sbjct: 275 KYDEAIGIYHDML-SKNVNPSPHIYCTFITGLGNGSRMDE---AFEFFEKSKASGFPPEA 330
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
P Y+ ++ C + + ++ E E G+ P +Y + + G + F
Sbjct: 331 PTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQR 390
Query: 463 CLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ C P+ + Y I + N ++ A ++N M
Sbjct: 391 MSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEM 427
>gi|224075802|ref|XP_002304774.1| predicted protein [Populus trichocarpa]
gi|222842206|gb|EEE79753.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 133/312 (42%), Gaps = 13/312 (4%)
Query: 150 LAVHCMRIREN-ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIIN 208
L +++ N + + + W +Q ++ FA A + + F + + +
Sbjct: 129 LVAEVLKVENNPQLATKFFHWAGKQKGFKHTFASYNAFAYNLNRSNFFRAADQLPELMEA 188
Query: 209 QGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKP 268
QG+ P+E F ILI + A +G +Y +M++ G +PR L+N + +L+ K
Sbjct: 189 QGKPPTEKQFEILIRMHSDAN-RGL--RVYYVYQKMVKFG-VKPRVFLYNRIMDSLI-KT 243
Query: 269 GGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
G +L A ++ + GL + Y LI I+ E + +L + M++
Sbjct: 244 G-----HLDLALSVYEDFRRDGLVEESVTYMILIKGLCKAGRIE-EMMEVLGR-MRENLC 296
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
+ +++R A EG+++ + W + A+V + A K G K E
Sbjct: 297 KPDVFAYTAMVRALAGEGNLDACLRVWEEMKRDGVEPDVMAYVTLVTALCKGGRVDKGYE 356
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+F+EM+ R Y ++E + L L+K+ V++G + + Y +L +
Sbjct: 357 VFKEMKGRRILIDRGIYGILVEAFVADGKIGLACDLLKDLVDSGYRADLRIYNSLIEGFC 416
Query: 449 NLGMHDRLHLAF 460
N+ D+ H F
Sbjct: 417 NVKRVDKAHKLF 428
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 154/397 (38%), Gaps = 52/397 (13%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
T LA++ ++ + E R+ E M + F T+L +GK + +F +++
Sbjct: 270 TILAMY-FKLNKVEAALRLVEEMKGKGCAPTVFTY-TELIKGLGKVGRVDDAYSLFFNML 327
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
G P + + LI A G L++A ++ +M L P +N++ +A+
Sbjct: 328 KDGCKPDVVLINNLINILGRA---GRLEDALKLFGKMDSLQ-CAPNVVTYNTVIKAIFE- 382
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
SK +A F + +G+ Y+ LI + + E+ LL +EM + G
Sbjct: 383 ----SKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRV--EKALLLLEEMDEKG 436
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKS 386
F P P A+ +++ + + +
Sbjct: 437 FP------------------------------------PCPAAYCSLIDSLGRAKRYEAA 460
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNM 446
E+F+E++E G +S Y +I+ L E + G P + +Y L +
Sbjct: 461 NELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSG 520
Query: 447 YLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV 505
+ GM D H E C P+ + I L L G ++A E+F M + I
Sbjct: 521 MIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESE-IMP 579
Query: 506 NTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIES 542
+ S N ILS +G F A K+ M LK +E +S
Sbjct: 580 DAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDS 616
>gi|110225637|ref|YP_665643.1| putative site-specific DNA endonuclease [Nephroselmis olivacea]
gi|6066152|gb|AAF03170.1|AF110138_2 putative site-specific DNA endonuclease [Nephroselmis olivacea]
Length = 236
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 83/212 (39%), Gaps = 64/212 (30%)
Query: 564 SLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVL--RRYL---YDQY 618
SL L+ QRE +IG LLG I K +N N + + R+Y+ Y+
Sbjct: 27 SLVLNDIQRECIIGTLLGDASIMKPLKN-------HYNPNIKWEQGIQNRQYIDHIYEIM 79
Query: 619 HEWL--------------------------HPSFKFWP------------KGRLVIPKLI 640
H W+ HPSF+F+ + R IP+L+
Sbjct: 80 HPWVGSPPVIRNIQGGGVLDRQSVWFKTYQHPSFRFYNQEFYMQDSDLENRRRKRIPRLL 139
Query: 641 HRWLTPRALAYWFMYGGHRTSVGDIL-----------LKLKVSSEGIALVFKTLKARSLD 689
HRWLTPR LAYWFM G+ T G ++ L V L K R ++
Sbjct: 140 HRWLTPRVLAYWFMDDGNLTPHGYVINTQCYPLHEQKLAAHVLGMNFGLEISIWKDR-IN 198
Query: 690 CRVKKKGRVFWIGFLGSNSTLFWKLIEPYVLD 721
R K +I S+ F +I PY+L+
Sbjct: 199 SRSKSPSYKLYIN--ASSRQSFTDIISPYILE 228
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 132/317 (41%), Gaps = 12/317 (3%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T+L +GK K + IF +++ +G P + + LI A G L +A ++
Sbjct: 304 TELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKA---GRLADAIKLFEE 360
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M L P +N++ +AL SK +A + + +G+ YS LI
Sbjct: 361 MESLQ-CTPNVVTYNTVIKALFE-----SKARASEAFLWYEKMKENGVVPSSFTYSILID 414
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ + E+ LL +EM + GF S++ K E A + + L E+
Sbjct: 415 GFCKTNRV--EKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCG 472
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
+ ++ K G +++++F EM++ + V AY+ ++ + + T+ S
Sbjct: 473 YSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHS 532
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLK 482
L++ E G P + S+ + N + G F+ K +P+ Y L L
Sbjct: 533 LLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLS 592
Query: 483 NAGNIEKAEEIFNHMHS 499
AG E+A ++ M+S
Sbjct: 593 RAGMFEEAAKLMKEMNS 609
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 362 DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
+NG+ A +Y + Y K+G K+L + +EM+E+ + +V Y ++I+ + KA + E
Sbjct: 258 ENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVE 317
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS--ECLE--KCRPNRTIYG 475
S+ ++ G KP + NL N+ LG RL A E +E +C PN Y
Sbjct: 318 EAYSIFMNMLKEGCKPDVVLINNLINL---LGKAGRLADAIKLFEEMESLQCTPNVVTYN 374
Query: 476 IYLESL 481
+++L
Sbjct: 375 TVIKAL 380
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 77/186 (41%), Gaps = 3/186 (1%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
S++ + +EG E + + + + +P T + + A+ K+G ++ +F EM+E
Sbjct: 199 SMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKE 258
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
+ Y I+ + K E L++E E G + +Y L G +
Sbjct: 259 NGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEE 318
Query: 456 LHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
+ F L E C+P+ + + L AG + A ++F M S Q N + N ++
Sbjct: 319 AYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTP-NVVTYNTVI 377
Query: 515 SAYLSS 520
A S
Sbjct: 378 KALFES 383
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 120/281 (42%), Gaps = 20/281 (7%)
Query: 134 ILNAQKKW-LRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
+ +A KW LR +Y L +R+ + + GFR+ M+ + D + L + +
Sbjct: 147 VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS-GVQPDVYTYSVLINGL 205
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
KE K ++FD+++ +G VP+ +TF LI + G +D A IY +M+
Sbjct: 206 CKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCK---NGRVDLAMEIYKQMLS-QSL 261
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
P +N+L L K L+QA + + GL+ K Y+ LI +
Sbjct: 262 SPDLITYNTLIYGLCKKGD------LKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGD 315
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
+D +K M Q V +++ +EG DAEK +L G+ A
Sbjct: 316 LDTAFEH--RKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSV--GLKPDAR 371
Query: 371 VYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
Y M + K G+ K ++ +EMQ SV Y+ ++
Sbjct: 372 TYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 412
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 12/217 (5%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA 378
LK M +G + ++ KE ++DA + + +L + F ++ +
Sbjct: 182 LKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHC 241
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
K G ++EI+++M + S + Y+ +I LCK + + L+ E G+KP
Sbjct: 242 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKI 301
Query: 439 SYINLTNMYLNLGMHDRLHLAFSE----CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+Y L + G L AF E R + +Y + L G AE++
Sbjct: 302 TYTTLIDGCCKDG---DLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKML 358
Query: 495 NHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKI 529
M S +G+ + R+ +I++ + GD K K+
Sbjct: 359 REMLS---VGLKPDARTYTMIINEFCKKGDVWKGSKL 392
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 80/191 (41%), Gaps = 2/191 (1%)
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP 403
+ G + DA + + E +P +E K+ F + E+ E AS+
Sbjct: 67 ESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLY 126
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSE 462
++ ++ CK + + +S+ + G++P + SY L N Y+ LG + + L +
Sbjct: 127 FFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 186
Query: 463 CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
+P+ Y + + L I+ A E+F+ M + N+ + ++ + +G
Sbjct: 187 LASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVP-NSVTFTTLIDGHCKNGR 245
Query: 523 FVKAEKIYDLM 533
A +IY M
Sbjct: 246 VDLAMEIYKQM 256
>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Brachypodium distachyon]
Length = 864
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 11/174 (6%)
Query: 369 AFVYKMEAY-------AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
F+ K+E+Y K G ++ E+ EM + Y+ I++ LCK E
Sbjct: 309 GFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCK-EGKAFD 367
Query: 422 ESLMKEFVETG-MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLE 479
+++FV +G M P + +Y +L + Y + G + E +K C PN Y + L+
Sbjct: 368 VRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQ 427
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
SL AG + E + M S++ ++T SCNII+ + A I D M
Sbjct: 428 SLLKAGRTTEVERLLERM-SEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGM 480
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 73/366 (19%), Positives = 145/366 (39%), Gaps = 62/366 (16%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
+ D + KE K R + D + + P +T+ L+ AY S +G A I + M
Sbjct: 355 IVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCS---KGNTTAANRILDEMA 411
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSK------------YYLQQA--EFIFHNLL-TSG 290
Q G P +N L ++L+ K G ++ Y L A I L S
Sbjct: 412 Q-KGCAPNLFTYNVLLQSLL-KAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSK 469
Query: 291 LEIQKDIYSGLIWLHS--YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
LE+ DI G+ W + +SL+ + +++ KEG
Sbjct: 470 LEMAMDIVDGM-WNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRF 528
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
++A+K + ++ D I + +Y + Y G+ ++++ R+M++R + S +Y+
Sbjct: 529 DEAKKKLVEMIGKD--ISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYN 586
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK 466
+I + ++++ LM E E G+ + +Y +L + GM
Sbjct: 587 LLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGM-------------- 632
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
+ KA + + M ++ + N S +++ A+ + DF A
Sbjct: 633 --------------------VNKAMPLLDEMLQNEIVP-NVTSFGLLIKAFCKTADFSAA 671
Query: 527 EKIYDL 532
++++D+
Sbjct: 672 QRVFDV 677
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/389 (19%), Positives = 156/389 (40%), Gaps = 92/389 (23%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIIN------------------------------ 208
D A+ T L K + CR +F+ ++N
Sbjct: 379 DLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQ 438
Query: 209 -QGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
+G +P+++T+ IL+ A ++ L I++R+++ G+ S+ N+L ++ ++
Sbjct: 439 REGMMPNKITYVILLNACVNPTA---LHWGREIHSRVVK-DGFMFDISVQNALI-SMYAR 493
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQA 326
G ++ A +F+ + ++KDI S + + + E +++ ++MQQA
Sbjct: 494 CGS-----IKDARLLFNKM------VRKDIISWTAMIGGLAKSGLGAEALAVF-QDMQQA 541
Query: 327 GFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFM 384
G + + S+L C+ ++ + +++E+ G+ T A V + Y+ G
Sbjct: 542 GLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEA--GLATDAHVANTLVNMYSMCGSVK 599
Query: 385 KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT 444
+ ++F M +R + AY+ +I + L E G+KP +YIN+
Sbjct: 600 DARQVFDRMTQR----DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINML 655
Query: 445 NMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
N + N+G++E A+EI + + D +
Sbjct: 656 N----------------------------------ACANSGSLEWAKEIHSLVLKDGYLS 681
Query: 505 VNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+T N ++S Y G F A ++D M
Sbjct: 682 -DTSLGNALVSTYAKCGSFSDALLVFDKM 709
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 152/356 (42%), Gaps = 30/356 (8%)
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
R D T + + K A+ +F D+ G P+ +T+ ++ A S+P LD
Sbjct: 509 RKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNA-CSSP--AALDW 565
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
I+ ++I+ G + N+L + S G + + A +F + Q+D
Sbjct: 566 GRRIHQQVIE-AGLATDAHVANTLVN-MYSMCGSV-----KDARQVFDRM------TQRD 612
Query: 297 I--YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKT 354
I Y+ +I ++ N+ KE + L + +Q+ G + K +++L CA G +E A++
Sbjct: 613 IVAYNAMIGGYAAH-NLGKEALKLFDR-LQEEGLKPDKVTYINMLNACANSGSLEWAKEI 670
Query: 355 WLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCK 414
+L+ T + YAK G F +L +F +M +R +V +++ II +
Sbjct: 671 HSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKR----NVISWNAIIGGCAQ 726
Query: 415 AEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI- 473
+ L + G+KP + ++++L + + G+ + F TI
Sbjct: 727 HGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIE 786
Query: 474 -YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
YG ++ L AG +++ E + M NTR +L A G+ AE+
Sbjct: 787 HYGCMVDLLGRAGQLDEVEALIKTM----PFQANTRIWGALLGACRIHGNVPVAER 838
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 17/259 (6%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA 378
L +EMQQ G G+ + +L C +E + + +++ + YA
Sbjct: 231 LLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYA 290
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
K G ++ E+F +M+ + SV ++ II +E+ + ++ + G+ P
Sbjct: 291 KCGSIHEAREVFDKMETK----SVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRI 346
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESL-KNAGNIEKAEEIFNHM 497
+YIN+ N + S L + G L + G+ + ++F +
Sbjct: 347 TYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKL 406
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRK 557
+ I NT ++ G++ +A +IY M + E K+ YV+ LN
Sbjct: 407 VNRDLIAWNT-----MIGGLAEGGNWEEASEIYHQM-----QREGMMPNKITYVILLN-- 454
Query: 558 EVKKPVSLNLSSEQRENLI 576
P +L+ E ++
Sbjct: 455 ACVNPTALHWGREIHSRVV 473
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 307 YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP 366
Y+D ID R +++ G + +E L ++ KEGDVEDA +L + +
Sbjct: 173 YKDAIDVFR------GIEKYGASKDREALNVLMDALVKEGDVEDAHSAFLEFKDCIT-LD 225
Query: 367 TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
+ +F + Y K F+ + +I EM++ V +Y I C+ ++ E++
Sbjct: 226 SSSFNILIHGYCKARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFD 285
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-----CRPNRTIYGIYLESL 481
E E G KP + +Y T + LG +L+ A E EK C P+ Y + L
Sbjct: 286 EMQEKGCKPNVITY---TTVMHALGKARQLNEAL-EVYEKMKRNGCLPDSKFYSSLIYVL 341
Query: 482 KNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+G I+ A ++F M Q + N N ++S+ + A K+ + M
Sbjct: 342 SQSGRIKDAWDVFEDMEK-QGVCRNLWVYNTMISSACAHSQGGSALKLLERM 392
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 369 AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
++ K+ K G+ +++EIFREM+E+ + Y+ +I LCK + E+ SLM E
Sbjct: 93 SYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEM 152
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNI 487
G P + +Y L + + G D E + PN Y ++ L + G +
Sbjct: 153 QARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEV 212
Query: 488 EKAEEIFNHM 497
E+A + M
Sbjct: 213 ERAILVLKEM 222
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 141/359 (39%), Gaps = 16/359 (4%)
Query: 145 EDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFD 204
++ T LAV R R + R+Y + + + K+ + + K+ + A+ +IF
Sbjct: 57 QNDTGLAVRTRRRRGIPSSLRIYRPKLLNSQDTDVISYSRKI-NGLCKKGQIAEAMEIFR 115
Query: 205 DIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL 264
++ +G P T++ILI L Q L+ S+ + M Q G+ P + +L
Sbjct: 116 EMEEKGSAPDSFTYNILING-LCKDAQ--LEMGVSLMDEM-QARGFSPTVVTYTTLIH-- 169
Query: 265 VSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQ 324
G + + A I + G+ Y+ LI D + ER L+ KEM+
Sbjct: 170 ----GFCTAGRVDAAMDILDEMEHRGITPNTVTYTALI--QGLCDCGEVERAILVLKEMK 223
Query: 325 QAGFEEGKEVLL--SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGE 382
G E V+ ++ ++G E + ++ S + + + G
Sbjct: 224 LRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGS 283
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
F+++ + EM V Y+ +I+ LCK E + + VE G+ P + +Y +
Sbjct: 284 FLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTS 343
Query: 443 LTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
L + G+ D E K PN Y + A + A ++ N M S+
Sbjct: 344 LIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSN 402
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 140/345 (40%), Gaps = 19/345 (5%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
+ ER+ + + + +G SE F +I +Y A G ++A + RM Q
Sbjct: 86 LASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRA---GSSEQALKTFYRM-QDFR 141
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
+P ++N + AL L + Q I+ N+ G+E Y+ L+ +
Sbjct: 142 VKPTVKIYNHILDAL------LDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNN 195
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
+D L+ EM G + + +++ K G V++A + + S P
Sbjct: 196 RVDGAHKLLV--EMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPS-----VPV 248
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
+ + K F ++ ++ EM + +V +Y II L A EL+ +++ +
Sbjct: 249 YNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMF 308
Query: 430 ETGMKPLMPSYINLT-NMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIE 488
G P + ++ +L +L G H+ L E PN Y + L + ++
Sbjct: 309 ARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLG 368
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A +FN M + N R+ + ++ Y +GD A ++++ M
Sbjct: 369 DAVSVFNQMEINGCCP-NVRTYSALIDGYAKAGDLDGASEVWNWM 412
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/401 (17%), Positives = 158/401 (39%), Gaps = 43/401 (10%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R +E + + + MQ + + + D + E +F I+ ++ G P+
Sbjct: 123 RAGSSEQALKTF-YRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNV 181
Query: 216 MTFHILIVAY-------------LSAPVQGCLDEACS---IYNRMIQLG----------G 249
T++IL+ A + +GC + S + + + +LG
Sbjct: 182 FTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMS 241
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
+ P ++N+L G +Y ++A + ++ G++ Y+ +I S
Sbjct: 242 FTPSVPVYNALIN------GVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAG 295
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD---NGIP 366
N++ L K M G S+++ +G +A W R++ N +
Sbjct: 296 NVELSLAVLAK--MFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVA 353
Query: 367 TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
A ++ + + +G+ ++ +F +M+ +V Y +I+ KA + + +
Sbjct: 354 YNALMHGLCSKRSLGD---AVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWN 410
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAG 485
+ G P + +Y + ++ M ++ + +E C PN + +++ L +G
Sbjct: 411 WMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSG 470
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
++ A ++F+ M + NT + N +L + L F +A
Sbjct: 471 RVDWAIKVFDQMGNSGCFP-NTTTYNELLDSLLKDRRFGEA 510
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/442 (19%), Positives = 167/442 (37%), Gaps = 80/442 (18%)
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE 236
R+ F + K GK R K +F+ +++ G P + ++ILI Y +G +DE
Sbjct: 8 RYTFRVVLKSFCKQGKLRDGYK---LFEQMLDNGISPDGIEYNILIDGYAK---KGRVDE 61
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKP---------------------------- 268
A +Y M+ +G +P +NSL A +
Sbjct: 62 ANRLYEEMVSVG-LEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTII 120
Query: 269 GGLSKY--YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQA 326
GL K + E +FH ++ G Y+ LI +NI ER L +EM
Sbjct: 121 SGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENI--ERAYKLLEEMASK 178
Query: 327 GFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKS 386
G+ ++L + G V +A++ + + A+ ++A K G+ ++
Sbjct: 179 GYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEA 238
Query: 387 LEIFREM--------------------------------QERLGSASVP---AYHKIIEL 411
+++F+++ ++ + S P Y ++
Sbjct: 239 MKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSG 298
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPN 470
C+A++ + +++E + G P + +Y L + + D+ H FS ++ C P+
Sbjct: 299 HCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 358
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
Y + L L + A +F+ M + + + + NI++ +G +A+ +
Sbjct: 359 IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVP-DVVTFNILMDGLCKAGKLDEAKDLL 417
Query: 531 DLM----CLKKYEIESAWMEKL 548
D M C Y + M L
Sbjct: 418 DQMTCSGCAPDYVAYNTLMNGL 439
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 125/307 (40%), Gaps = 20/307 (6%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E +++ E M + + + T L+ + + K ++ + FD + ++G P + ++
Sbjct: 166 ERAYKLLEEMASKGYVPDNITYNTILSG-LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNG 224
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ A +G DEA ++ +I GY P +NS+ L K + +AE
Sbjct: 225 LLDALYK---EGKTDEAMKLFKDVIA-KGYMPDTVTYNSILLGLARKSN------MDEAE 274
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+F ++ SG YS ++ H +D L +EM + G +L
Sbjct: 275 EMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVL--EEMSKIGAVPDVVTYNILLD 332
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLG 398
K V+ A + + ++ DNG Y + K + + +F M ER
Sbjct: 333 GLCKTNLVDKAHELFSTMV--DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKL 390
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH---DR 455
V ++ +++ LCKA + + + L+ + +G P +Y L N G H DR
Sbjct: 391 VPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADR 450
Query: 456 LHLAFSE 462
L A E
Sbjct: 451 LTQAMKE 457
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 128/312 (41%), Gaps = 29/312 (9%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ TF I+ Y SA G A ++ M Q G +Q S + L SK ++
Sbjct: 134 PTPKTFAIIAERYASA---GKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMA 190
Query: 273 KYYLQ------QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQA 326
+ +A+ + +N++ +G + K L L KEM +
Sbjct: 191 YNLFKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEML----------------KEMVKR 234
Query: 327 GFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKS 386
G ++L+ + G + +A +L + + D I + + + GE ++
Sbjct: 235 GLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRA 294
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNM 446
++F M ++ SV Y+ I++LCK + + + +E V G P +Y +
Sbjct: 295 RKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRG 354
Query: 447 YLNLGMHDRLHLAFSECL--EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
+ G +R + F + + C PN Y + + + G I+KA ++F M S +
Sbjct: 355 LCHRGEMER-AMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLP 413
Query: 505 VNTRSCNIILSA 516
N + NI++SA
Sbjct: 414 -NLDTYNILISA 424
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 6/174 (3%)
Query: 366 PTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
PTP F E YA G+ +++++F M + + +++ I+++LCK++ E+ +L
Sbjct: 134 PTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNL 193
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKN 483
K F + + SY + N + + ++ E +++ PN T Y L+
Sbjct: 194 FKVF-KGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFR 252
Query: 484 AGNIEKAEEIFNHMHS-DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
AG I +A + F M D I V T + ++ + +G+ +A K++D M K
Sbjct: 253 AGQINEAWDFFLEMKKRDCEIDVITYT--TVIHGFGVAGEIKRARKVFDTMVKK 304
>gi|242091205|ref|XP_002441435.1| hypothetical protein SORBIDRAFT_09g026630 [Sorghum bicolor]
gi|241946720|gb|EES19865.1| hypothetical protein SORBIDRAFT_09g026630 [Sorghum bicolor]
Length = 664
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 143/344 (41%), Gaps = 13/344 (3%)
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL 271
VP T + ++V L A G L +A + + M+ G P P ++ +L + G
Sbjct: 171 VPPSPTAYRVVVECLVAD-HGRLADAVELKDEMLDSGFVGPDPKVYRTLMAGFLGAGDGA 229
Query: 272 SKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQ-QAGFEE 330
L Q G + I G + + ++++ + K+ + ++
Sbjct: 230 KAVELYQE----LKDKVGGEPVLDGIVYGTLMKAYFLMGMEEKAMECYKEVLSVESAVRF 285
Query: 331 GKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN-----GIPTPAFVYKMEAYAKIGEFMK 385
G + V+ + G +EDA K + R+L + + +F ++AY G F
Sbjct: 286 GADSYNEVVDALGQNGRLEDALKLFHRMLGEHDPPLRIAVDLRSFRVMVDAYCAAGRFED 345
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
++ +FR M E V +Y+ +I L + + E L E E+G+ +Y+ L
Sbjct: 346 AIAVFRRMGEWKLVPDVASYNNLIRHLQNNQLIDKVEELYSEMCESGVGADEETYLLLME 405
Query: 446 MYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
++ D F + E + +P+ T Y ++ L ++KA+E F+ M ++ +
Sbjct: 406 ACFSVDRIDDGISYFDKMDELELKPDATAYHKLVDGLVGFSMVDKAQEYFDQM-KEKGVS 464
Query: 505 VNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL 548
+ S +L AY+++ A K+ + L + + S M +L
Sbjct: 465 PSISSYETLLKAYIAADRLDDAVKVAKGILLDEKVVFSDGMREL 508
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 119/293 (40%), Gaps = 38/293 (12%)
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
++A IF + SGL Y+ ++ ++ + + LL EM+ G +
Sbjct: 226 ERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLD-EMRSKGLGFDEFTCS 284
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
+V+ C +EG +++A++ ++ L T + ++ + K G + ++L I +EM++
Sbjct: 285 TVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDN 344
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN------- 449
Y++++ +A E +L+ E G+KP +Y + N Y
Sbjct: 345 NCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKA 404
Query: 450 LGMHDRLH---LAFSEC--------------------------LEKCRPNRTIYGIYLES 480
L ++D++ A + C ++ C PNR + L
Sbjct: 405 LSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSM 464
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
N G + + +F M S + + N +++A G + AEKIYD M
Sbjct: 465 CGNKGMHKYVKRVFQEMKS-CGFEPDRDTFNTLITASGRCGSDIDAEKIYDEM 516
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 137/321 (42%), Gaps = 36/321 (11%)
Query: 200 RDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS 259
+ +F ++ + G P TF+ LI A + G +A IY+ M++ G+ P + +N+
Sbjct: 475 KRVFQEMKSCGFEPDRDTFNTLITA---SGRCGSDIDAEKIYDEMLE-AGFTPSVATYNA 530
Query: 260 LFRALVSKPG---------GLSKYYLQQAEFIFHNLLTS--------GLE-IQKDIYSGL 301
L AL + + + +E + +L S G+ I+KDIY G
Sbjct: 531 LLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGH 590
Query: 302 I---WLHSYQDNIDKERISLLK------KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
I W+ + + L + +Q+ G++ V S+L + +++ ++ D
Sbjct: 591 IFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRK-NMHDRA 649
Query: 353 KTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
+ L++ + G+ Y M+ YA+ GE K+ EI RE+Q + + +Y+ +I+
Sbjct: 650 HEIMHLIQ-ECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIK 708
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRP 469
C+ + E + G++P + +Y Y GM + S + CRP
Sbjct: 709 GFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRP 768
Query: 470 NRTIYGIYLESLKNAGNIEKA 490
N Y I ++ A ++A
Sbjct: 769 NELTYKIVVDGYCKAKKFKEA 789
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 121/316 (38%), Gaps = 47/316 (14%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ FD + + G+E + ++ F + +QG P +T++ L+ + A
Sbjct: 271 MRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKA-- 328
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G EA SI M + P +N L A V + +Y + A I + +G
Sbjct: 329 -GIYSEALSIMKEM-EDNNCPPDAVTYNELVAAYVR-----AGFYEEGAALI-DTMTENG 380
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
++ Y+ +I + +DK +SL +M+++G ++L + K+ E+
Sbjct: 381 IKPNAVTYTTMINAYGRAAQVDKA-LSLY-DQMKESGCAPNVCTYNAILGMLGKKSQSEE 438
Query: 351 AEK---------------TWLRLLE--SDNGI------------------PTPAFVYKME 375
K TW +L + G+ F +
Sbjct: 439 MMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLIT 498
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
A + G + + +I+ EM E + SV Y+ ++ L + + ES++K+ G KP
Sbjct: 499 ASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKP 558
Query: 436 LMPSYINLTNMYLNLG 451
SY + N Y G
Sbjct: 559 SETSYSLILNSYAKGG 574
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 142/310 (45%), Gaps = 16/310 (5%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
+ K+R+ + + FD + ++ P + + L+ + A G + EA ++ M ++ G
Sbjct: 191 LSKKRRAIEAQSFFDSLKDRFE-PDVVVYTSLVHGWCRA---GNISEAERVFGEM-KMAG 245
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
QP ++ + AL + G +++ A +F ++ G + ++ L+ +H
Sbjct: 246 IQPNVYTYSIVIDALC-RSGQITR-----AHDVFSEMIDVGCDPNAITFNNLMRVHVKAG 299
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
E++ + +M++ G ++ ++ ++E+A K L ++ + +
Sbjct: 300 RT--EKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKI-LNSVKKGCNLNASS 356
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
F +K+G+ + +F +M++ + Y+ ++ + + T++ L KE
Sbjct: 357 FNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMD 416
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KC-RPNRTIYGIYLESLKNAGNI 487
E ++P +Y L + + +G + + F E +E KC RP+ +Y + L+ L+ AG +
Sbjct: 417 ENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQL 476
Query: 488 EKAEEIFNHM 497
+K EE+ M
Sbjct: 477 KKHEELVEKM 486
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 73/166 (43%), Gaps = 7/166 (4%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ + + G ++ +F EM+ +V Y +I+ LC++ + + E ++ G
Sbjct: 222 VHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGC 281
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEE 492
P ++ NL +++ G +++ +++ C P+ Y +ES N+E+A +
Sbjct: 282 DPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVK 341
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY----DLMC 534
I N + + +N S N I GD A +++ DL C
Sbjct: 342 ILNSV--KKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKC 385
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 121/312 (38%), Gaps = 21/312 (6%)
Query: 232 GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGL 291
G EA +NRM G + + F ++S LSK F + L
Sbjct: 160 GLAAEAVHAFNRMEDYGCKPDKIA-----FSVVIS---SLSKKRRAIEAQSFFDSLKDRF 211
Query: 292 EIQKDIYSGLIWLHSYQDNI-DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
E +Y+ L+ NI + ER+ EM+ AG + V+ + G +
Sbjct: 212 EPDVVVYTSLVHGWCRAGNISEAERVF---GEMKMAGIQPNVYTYSIVIDALCRSGQITR 268
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA-SVPAYHKII 409
A + +++ F M + K G K L+++ +M+ RLG Y+ +I
Sbjct: 269 AHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMK-RLGCPPDAITYNFLI 327
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCR 468
E C+ + E ++ V+ G S+ + LG + H F++ + KCR
Sbjct: 328 ESHCRDDNLEEAVKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCR 386
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
PN Y I + + + + ++ M ++ I N + +++S + G + A
Sbjct: 387 PNTVTYNILMRMFADKKSTDMVLKLRKEMDENE-IEPNANTYRVLISTFCGIGHWNNAYS 445
Query: 529 IYDLM----CLK 536
+ M CL+
Sbjct: 446 FFKEMIEEKCLR 457
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 160/382 (41%), Gaps = 20/382 (5%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+Q+ + + + D + K+R + + +++++G P +T++ ++ + S
Sbjct: 227 MEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSL-- 284
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTS 289
G L+EA ++ M+ G P F LV GL K + +A + +
Sbjct: 285 -GQLNEATRLFKEMV---GRNVMPD--TVTFNILVD---GLCKEGMVSEARCVSETMTEK 335
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
G E Y+ L+ + + +D E I +L + + + + C K +
Sbjct: 336 GAEPNAYTYNALMDGYCLHNQMD-EAIKVLGIMIGKGCAPNLSSYNILINGYC-KSKRMN 393
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
+A++ + E + T + M+ ++G ++L +F+EM + AY ++
Sbjct: 394 EAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILL 453
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE-CLEKCR 468
+ CK + L+KE E +KP + Y L G + FS+ + R
Sbjct: 454 DGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIR 513
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC--NIILSAYLSSGDFVKA 526
P+ Y + ++ L G ++A E F M D G SC N+I+ +L + D A
Sbjct: 514 PDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDD---GFLPDSCSYNVIIQGFLQNQDSSTA 570
Query: 527 EKIYDLMCLKKYEIESAWMEKL 548
++ D M K++ +S+ + L
Sbjct: 571 IQLIDEMVGKRFSADSSTFQML 592
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 98/219 (44%), Gaps = 3/219 (1%)
Query: 316 ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME 375
+S++ K M + G + +++ EG +++A + ++ S + ++ +
Sbjct: 151 VSVMGK-MFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVIN 209
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
K G + ++ +FR+M++ G +V Y+ II+ LCK + E V+ G+ P
Sbjct: 210 GLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPP 269
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ +Y + + + +LG + F E + + P+ + I ++ L G + +A +
Sbjct: 270 DVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVS 329
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M +++ N + N ++ Y +A K+ +M
Sbjct: 330 ETM-TEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIM 367
>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 155/354 (43%), Gaps = 44/354 (12%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + K+ ++ + D++ +G VP+E+T++ L+ ++G LD+A S+ NRM+
Sbjct: 76 LISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLC---LKGKLDKAMSLLNRMV 132
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYL---------QQAEFIFHNLLTSGLEIQKD 296
P +L V L + + EF + +L++ + K
Sbjct: 133 A-NKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKG 191
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
+ +W KEM + G + V +++ +EG ++A++
Sbjct: 192 EHGMQLW-----------------KEMVEKGCKPNTIVYSALIDGLCREGKPDEAKE--- 231
Query: 357 RLLESDNGIPTP-AFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
L+E N TP +F Y M Y + G+ K++ +++EM + + Y +I LC
Sbjct: 232 YLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLC 291
Query: 414 KAEETELTESLM--KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL---EKCR 468
K +L E+L+ K+ + G+K + +Y ++ + + N + ++ F++ L K +
Sbjct: 292 K--NGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQ 349
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
P+ Y I L + ++ +A +I N M DQ + +C+I L + D
Sbjct: 350 PDVVTYNILLNAFCTKNSVSRAIDILNTM-LDQGCDPDFITCDIFLKTLRDNMD 402
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 111/272 (40%), Gaps = 14/272 (5%)
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+G +DEA S+ + M Q+ G P P N L AL K G LS+ A + N+ G
Sbjct: 48 EGRIDEAVSLLDEM-QVEGTFPNPVAFNVLISALCKK-GDLSR-----ASKLVDNMFLKG 100
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ Y+ L+ + +DK +SLL + M +++ K G D
Sbjct: 101 CVPNEVTYNSLVHGLCLKGKLDKA-MSLLNR-MVANKCVPNDITFGTLVDGFVKHGRALD 158
Query: 351 AEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
+ + L E G F Y + K G+ +++++EM E+ + Y +
Sbjct: 159 GVRVLVSLEEK--GYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSAL 216
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-C 467
I+ LC+ + + + + E G P +Y +L Y G + L + E + C
Sbjct: 217 IDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDC 276
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+ Y I + L G +++A ++ M S
Sbjct: 277 NHHEVCYSILINGLCKNGKLKEALIVWKQMLS 308
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
A ++G +++E+FR M +R A Y ++ LC + SL+ E G P
Sbjct: 9 ALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFP 68
Query: 436 LMPSYINLTNMYLNLGMHDRL-HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
++ L + G R L + L+ C PN Y + L G ++KA +
Sbjct: 69 NPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLL 128
Query: 495 NHMHSDQTI 503
N M +++ +
Sbjct: 129 NRMVANKCV 137
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/374 (18%), Positives = 157/374 (41%), Gaps = 14/374 (3%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E FR+ M++ R L + + ++F + + ++ G P+E+ ++
Sbjct: 263 EEAFRLKGRMVEGR-VRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNE 321
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
+I + +G EA +++ M+ G Q + +N + +AL K G ++ AE
Sbjct: 322 MIGWHCR---KGHCSEALKLFDEMVSKGIKQTVVT-YNLIAKALC-KEG-----EMEHAE 371
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
I +L +G+ + +++ ++ H + + + L +EM + ++ + ++
Sbjct: 372 KILDEMLLAGMMVHCSLFNSVVAWH-LRGTGRLDLVLRLIREMLARFLKPNDALMTACIQ 430
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
K G E+A + W ++L G+ + + ++ ++ + M
Sbjct: 431 ELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVEL 490
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLA 459
Y+ +I+ CKA + + L + ++ G KP + ++ + Y NLG + + LHL
Sbjct: 491 DRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLL 550
Query: 460 FSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
E +P+ YG ++ A ++ KA E + + + N N ++ Y
Sbjct: 551 DQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKN-GLRPNAVIYNALIGGYGR 609
Query: 520 SGDFVKAEKIYDLM 533
+G+ A I D M
Sbjct: 610 NGNISDAIGILDTM 623
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 109/265 (41%), Gaps = 12/265 (4%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K K + + DD+I +G P TF+I + Y + G ++E + ++M + G +
Sbjct: 504 KASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNL---GKVEEILHLLDQM-KSEGLK 559
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P + ++ G + +A L+ +GL IY+ LI + NI
Sbjct: 560 PDIVTYGTIID------GYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNI 613
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
+ I +L M+ G + S++ G VE+ + + + + D + +
Sbjct: 614 S-DAIGILDT-MKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYT 671
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
++ + KIG+ +++ F+EM R + Y ++ K+ E L E V
Sbjct: 672 IIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSL 731
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRL 456
G+ P SY L + + + D++
Sbjct: 732 GIVPDSVSYNTLISGFCEVDSLDKM 756
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 115/296 (38%), Gaps = 45/296 (15%)
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVL 335
++A I+ +L GL + + LI H Q N KE +LK M +G E +
Sbjct: 439 EEAAEIWFQVLGKGLGVNVATSNALI--HGLCQGNNMKEATKVLKA-MVNSGVELDRITY 495
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREM 393
+++ C K +++A LR G F + + Y +G+ + L + +M
Sbjct: 496 NIMIQGCCKASKMDEA--IQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQM 553
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY------ 447
+ + Y II+ CKA++ + E ++ G++P Y L Y
Sbjct: 554 KSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNI 613
Query: 448 -----------------------------LNLGMHDRLHLAFSECLEKCRPNRTI-YGIY 477
+ G+ + + F++C+ K I Y I
Sbjct: 614 SDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTII 673
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++ G I++A F MHS + I N + ++ AY SG+ +A K++D M
Sbjct: 674 IQGFCKIGKIDEAVMYFKEMHS-RGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEM 728
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 102/229 (44%), Gaps = 10/229 (4%)
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
+ D+++ I+LH+Y + E I L +M+ G + +++ K D+ A +
Sbjct: 524 KPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANE 583
Query: 354 TWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
L++ NG+ A +Y + Y + G ++ I M+ + Y+ ++
Sbjct: 584 YLTELMK--NGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYW 641
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPN 470
+C A E +++ + + ++ + Y + + +G D + F E + PN
Sbjct: 642 MCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPN 701
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV--NTRSCNIILSAY 517
+ Y + + +GN E+A ++F+ M S +G+ ++ S N ++S +
Sbjct: 702 KMTYTTLMFAYSKSGNKEEASKLFDEMVS---LGIVPDSVSYNTLISGF 747
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 3/167 (1%)
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
+ + G ++L++F EM + +V Y+ I + LCK E E E ++ E + GM
Sbjct: 326 HCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVH 385
Query: 437 MPSYINLTNMYL-NLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ ++ +L G D + E L + +PN + ++ L +G E+A EI+
Sbjct: 386 CSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIW 445
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIE 541
+ + +GVN + N ++ + +A K+ M E++
Sbjct: 446 FQVLG-KGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELD 491
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 16/279 (5%)
Query: 134 ILNAQKKW-LRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
+ +A KW LR +Y L +R+ + GFR+ M+ + D + L + +
Sbjct: 164 VFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASG-VQPDVYTYSVLINGL 222
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
KE K ++FD+++ +G VP+ +TF LI + G +D A IY +M+
Sbjct: 223 SKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCK---NGRVDLAMEIYKQMLS-QSL 278
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
P +N+L L K L+QA + ++ GL+ K Y+ LI + +
Sbjct: 279 LPDLITYNTLIYGLCKKGD------LKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGD 332
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
+D +K M Q V +++ +EG DAEK +L T +
Sbjct: 333 LDSAFEH--RKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTY 390
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
+ + K G+ K ++ +EMQ SV Y+ ++
Sbjct: 391 TMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 379 KIGEFMKSLEIFR-------EMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
K+ E++ L+ F+ E+ E AS+ ++ ++ CK + + +S+ +
Sbjct: 112 KVLEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKW 171
Query: 432 GMKPLMPSYINLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKA 490
G++P SY L N Y+ LG+ D L + +P+ Y + + L ++ A
Sbjct: 172 GLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDA 231
Query: 491 EEIFNHM 497
+E+F+ M
Sbjct: 232 DELFDEM 238
>gi|326492712|dbj|BAJ90212.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506700|dbj|BAJ91391.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 93/224 (41%), Gaps = 9/224 (4%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+ +A +F + + + + S + D +D L MQ G E VL
Sbjct: 213 VDEARAVFDGMPSRTVATWSAMVSAYSRAARFHDAVD------LFSAMQVDGVEPNANVL 266
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
+SVL CA G +E + + D G+ + ++ Y K G K+ ++F +
Sbjct: 267 VSVLGCCASLGALEQGAWVHAYIDKQDVGMNALVVIALVDMYCKCGSIHKARQVFDTSRS 326
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
+ G A + +++ ++ L + + +L E G++P ++I + Y + GM D
Sbjct: 327 Q-GLAKLSSWNAMMLGLAAHGQCQEALALFSELESYGLRPDNVTFIAMLMAYGHSGMADE 385
Query: 456 LHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
F+ + P YG +++L AG + +AE+ M
Sbjct: 386 AKALFASMAREYGVTPGIEHYGCLVDALARAGRLREAEDTIRAM 429
>gi|225425981|ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Vitis vinifera]
Length = 603
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/418 (19%), Positives = 168/418 (40%), Gaps = 32/418 (7%)
Query: 125 SHKGGTLVRILNAQKKWLRQEDG---TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFA 181
S K G + + K + Q DG L C+R R+ FR+ E +++ Y D A
Sbjct: 130 SKKWGLSLLVFEDFKSFDAQLDGDICCRLISSCIRARK----FRITESLLEVFSYNDDVA 185
Query: 182 LATKLADYMGKERK---FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
L MG K F+ ++D + + G VP+ +++ ++ AY+
Sbjct: 186 LLV-FNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKI---------- 234
Query: 239 SIYNRMIQL-GGYQPR----PSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
Y +++ L ++ R ++R L G + + + + EF F ++ G+
Sbjct: 235 RDYEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAF-EALEF-FRDMTKKGILE 292
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
+YS LI S+ + + L +E ++ EV L ++ + +EG +E +
Sbjct: 293 DSAVYSSLIC--SFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERTLE 350
Query: 354 TWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
+ + + F + +AK + +++ E+ + Y II + C
Sbjct: 351 IVKAMKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYC 410
Query: 414 KAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRT 472
+ E E + E + G + +Y ++ MY G + + + L C PN
Sbjct: 411 RMELYSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCEPNVW 470
Query: 473 IYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+Y ++ N+ + E+++ M + + + S ++SAY +GDF + Y
Sbjct: 471 VYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVP-DRVSYTSVISAYSKAGDFETCMRFY 527
>gi|225456802|ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein VITISV_010606 [Vitis vinifera]
Length = 692
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 136/301 (45%), Gaps = 13/301 (4%)
Query: 232 GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGL 291
G D+A +Y+ M + +P + S+ ++ K G +K A F + G+
Sbjct: 256 GRYDDAWKVYDEM-ETNNIRP-DHVTCSIMITVMRKDGHSAK----DAWEFFQRMNRKGV 309
Query: 292 EIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
+ ++ LI S+ D K +++ EM++ G V +++ +K VE+A
Sbjct: 310 KWSLEVLGALI--KSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEA 367
Query: 352 EKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
E + + ++ +PT A + M+AY++ + + EMQ+ +V +Y +I
Sbjct: 368 EGLFGEM-KAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLIS 426
Query: 411 LLCKAEE-TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCR 468
+ ++ +++ + G+KP SY L + Y G H++ + AF E +
Sbjct: 427 AYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIK 486
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
P+ Y L++ + AG+ + +I+ M SD+ G + NI+L + G +++A
Sbjct: 487 PSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRV-TFNILLDGFAKQGHYMEARD 545
Query: 529 I 529
+
Sbjct: 546 V 546
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 112/265 (42%), Gaps = 11/265 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D K + + +F ++ +G +P+ T++IL+ AY S +Q + I N ++
Sbjct: 354 LMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAY-SRRMQPEI-----IENLLL 407
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
++ P++ + + L+S G K A+ F + G++ Y+ LI H
Sbjct: 408 EMQDMGLEPNVKS--YTCLISAYGRQKKMSDMAAD-AFLRMKKVGIKPTSHSYTALI--H 462
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+Y E+ + M++ G + E ++L + GD + K W +L
Sbjct: 463 AYSVGGWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEG 522
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
F ++ +AK G +M++ ++ E + +V Y+ ++ + + L+
Sbjct: 523 TRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLL 582
Query: 426 KEFVETGMKPLMPSYINLTNMYLNL 450
KE +KP +Y + Y+ +
Sbjct: 583 KEMTSLNLKPDSITYSTMIYAYVRV 607
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 123/315 (39%), Gaps = 51/315 (16%)
Query: 134 ILNAQKKW-LRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
+ +A KW LR +Y L +R+ + GFR+ M+ D + L + +
Sbjct: 161 VFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLP-DVYTYSVLINGL 219
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
KE K ++FD+++ +G +P+ +TF LI + G +D A IY RM
Sbjct: 220 CKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCK---NGRVDFAMEIYKRM------ 270
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
L SL L++ +N L GL + D L D
Sbjct: 271 -----LSQSLLPDLIT-----------------YNTLIYGLCKKGD-------LKQAHDL 301
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
ID EM G + K +++ C KEGD++ A + R+++ + + A+
Sbjct: 302 ID---------EMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 352
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
+ + G + + ++ REM Y II CK + L+KE
Sbjct: 353 AALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 412
Query: 431 TGMKPLMPSYINLTN 445
G P + +Y L N
Sbjct: 413 NGHAPSVVTYNVLMN 427
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 2/161 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+E K+ F + E+ E AS+ ++ ++ CK + + +S+ + G+
Sbjct: 111 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 170
Query: 434 KPLMPSYINLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
+P + SY L N Y+ LG D L + P+ Y + + L ++ A E
Sbjct: 171 RPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANE 230
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+F+ M I N + ++ + +G A +IY M
Sbjct: 231 LFDEMLVKGLIP-NGVTFTTLIDGHCKNGRVDFAMEIYKRM 270
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 18/196 (9%)
Query: 343 AKEGDVEDAEKTWLRLLESD---NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
KE ++DA + + +L NG+ F ++ + K G ++EI++ M +
Sbjct: 220 CKESKMDDANELFDEMLVKGLIPNGV---TFTTLIDGHCKNGRVDFAMEIYKRMLSQSLL 276
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
+ Y+ +I LCK + + L+ E G+KP +Y L + G L A
Sbjct: 277 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG---DLDTA 333
Query: 460 FSE----CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV--NTRSCNII 513
F E R + Y + L G AE++ M S +G+ +T + +I
Sbjct: 334 FEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLS---VGLKPDTGTYTMI 390
Query: 514 LSAYLSSGDFVKAEKI 529
++ + GD K K+
Sbjct: 391 INEFCKKGDVWKGSKL 406
>gi|449530353|ref|XP_004172160.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like, partial [Cucumis sativus]
Length = 312
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 135/312 (43%), Gaps = 17/312 (5%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
+E K ++IFD++ Q P+ TF L+ A +G ++A I+ +M Q GY+
Sbjct: 8 QESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAR---EGLCEKAEEIFEQM-QEAGYE 63
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P +N+L + S+ G + A IF + G E + Y+ I + +Y
Sbjct: 64 PDVYAYNALMESY-SRAG-----FPYGAAEIFSLMQHMGCEPDRASYN--IMVDAYGRAG 115
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
E + +EM++ G + + +L + G+V E ++ +S G+ FV
Sbjct: 116 LHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKS--GLKPDTFV 173
Query: 372 YK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
+ Y ++G+F K ++F MQ+ A + Y+ +I + +A E E L +
Sbjct: 174 MNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLP 233
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIE 488
++P + ++ + Y ++ R F + ++ C P+ + L + + IE
Sbjct: 234 AKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIE 293
Query: 489 KAEEIFNHMHSD 500
+ + MH D
Sbjct: 294 QVTNVVRTMHKD 305
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 92/204 (45%), Gaps = 2/204 (0%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER 396
+++ A+EG E AE+ + ++ E+ A+ ME+Y++ G + EIF MQ
Sbjct: 36 ALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHM 95
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
+Y+ +++ +A E +++ +E G+ P M S++ L + Y + G +
Sbjct: 96 GCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKC 155
Query: 457 HLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILS 515
+ + +P+ + L G K E++F+ M + + NI+++
Sbjct: 156 EDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKG-PCRADISTYNILIN 214
Query: 516 AYLSSGDFVKAEKIYDLMCLKKYE 539
Y +G + E+++ L+ K E
Sbjct: 215 VYGRAGFVERMEELFQLLPAKNLE 238
>gi|297740791|emb|CBI30973.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 122/266 (45%), Gaps = 14/266 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D+ +G +P+ T++IL Y + G LD A ++N M + G +++L
Sbjct: 239 VLKDMEIKGCLPNVDTYNILASGYCDS---GMLDSAIDLFNDM-KTDGINWNFMTYDTLI 294
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
R L S GG + + E + + +G I Y+ +I+ Y+ N +E + L K
Sbjct: 295 RGLCS--GGRMEDGFKILELMEESRGGAGGRISP--YNSIIY-GLYKKNQFEEALEFLTK 349
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKI 380
M++ F + L +L C EG + DA++ + ++++ + G+P+ +V + + +
Sbjct: 350 -MEKL-FPRAVDRSLRILGFC-NEGSIGDAKRVYDQMIK-EGGVPSVLVYVCLIHGFCQD 405
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G ++ E+ EM + + P ++ +I C + LM++ V G P M SY
Sbjct: 406 GNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSY 465
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEK 466
+ + N G + F + +EK
Sbjct: 466 SPMVDALCNKGDFQKAVRLFLQMVEK 491
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 111/287 (38%), Gaps = 16/287 (5%)
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYS-GLIWLHSY 307
G P + NS+ LV + L++ EF ++ +G + D Y+ G++
Sbjct: 41 GENPSLKIFNSILDVLVKEDIDLAR------EFYRKKMMMNG--VSGDDYTFGILMKGLC 92
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
N + LL+ M+ G + +++ K G V A ++E +
Sbjct: 93 LTNRIGDAFKLLQV-MKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVEPSD---- 147
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
F + AY + +++L + + V K++ +LCKA +++
Sbjct: 148 VTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLER 207
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGN 486
G + +Y L + LG H + ++ C PN Y I ++G
Sbjct: 208 VESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGM 267
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++ A ++FN M +D I N + + ++ S G KI +LM
Sbjct: 268 LDSAIDLFNDMKTDG-INWNFMTYDTLIRGLCSGGRMEDGFKILELM 313
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 150/359 (41%), Gaps = 19/359 (5%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M + Y D L TKL R K + + I+ + P ++ LI +
Sbjct: 115 MVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPDVFAYNALINGFCK--- 170
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+D+A + +RM + + P +N + +L S+ L A + + LL+
Sbjct: 171 MNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGK------LDLALKVLNQLLSDN 223
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ Y+ LI + +D E + L+ EM G + +++R KEG V+
Sbjct: 224 CQPTVITYTILIEATMLEGGVD-EALKLMD-EMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 351 AEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
A + +R LE P ++ + A G++ + ++ +M +V Y +I
Sbjct: 282 AFE-MVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL--EKC 467
LC+ + E +L+K E G+ P SY L + G D + + F E + + C
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD-VAIEFLETMISDGC 399
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
P+ Y L +L G ++A EIF + + N+ S N + SA SSGD ++A
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKL-GEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 79/192 (41%), Gaps = 2/192 (1%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
K ++DA + R+ D T + + + G+ +L++ ++ +V
Sbjct: 169 CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTV 228
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR-LHLAFS 461
Y +IE + LM E + G+KP M +Y + GM DR + +
Sbjct: 229 ITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRN 288
Query: 462 ECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
L+ P+ Y I L +L N G E+ E++ M S++ N + +I+++ G
Sbjct: 289 LELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC-DPNVVTYSILITTLCRDG 347
Query: 522 DFVKAEKIYDLM 533
+A + LM
Sbjct: 348 KIEEAMNLLKLM 359
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 159/379 (41%), Gaps = 36/379 (9%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M +H + + L + K + + + +++ G VP TF+ +I+
Sbjct: 237 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 296
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRAL---------------VSKP------- 268
++EA + NRM+ + G+ P + L L + KP
Sbjct: 297 ---INEAAKMVNRML-IRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNT 352
Query: 269 ---GGLSKYYLQQAEFIFHNLLTS-GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQ 324
G ++ L A+ + +++TS G+ Y+ LI+ + ++ + + +L+ +M+
Sbjct: 353 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY-WKKGLVGLALEVLR-DMR 410
Query: 325 QAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEF 383
G + ++ K G +++A L + +D P T F + A+ K
Sbjct: 411 NKGCKPNVYSYTILVDGFCKLGKIDEA-YNLLNEMSADGLKPNTVGFNCLISAFCKEHRI 469
Query: 384 MKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINL 443
+++EIFREM + V ++ +I LC+ +E + L+++ + G+ +Y L
Sbjct: 470 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 529
Query: 444 TNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQT 502
N +L G + + L + + Y ++ L AG ++KA +F M D
Sbjct: 530 INAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGL 589
Query: 503 IGVNTRSCNIILSAYLSSG 521
+ ++ SCNI+++ SG
Sbjct: 590 VP-SSISCNILINGLCRSG 607
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 131/301 (43%), Gaps = 17/301 (5%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L D K K + ++ +++ G P+ + F+ LI A+ + + EA I+
Sbjct: 422 TILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCK---EHRIPEAVEIFRE 478
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
M + G +P ++ F +L+S GL + ++ A ++ ++++ G+ Y+ LI
Sbjct: 479 MPRKGC---KPDVYT--FNSLIS---GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 530
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
+ I + R L EM G + S+++ + G+V+ A + ++L D
Sbjct: 531 NAFLRRGEIKEAR--KLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLR-D 587
Query: 363 NGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
+P+ + + + G +++E +EM R + + ++ +I LC+A E
Sbjct: 588 GLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 647
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLES 480
++ ++ G+ P +Y L + G L E +E PN + I L+S
Sbjct: 648 LTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQS 707
Query: 481 L 481
L
Sbjct: 708 L 708
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 80/400 (20%), Positives = 147/400 (36%), Gaps = 41/400 (10%)
Query: 162 TGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHIL 221
T ++ W Q YR F + L +G +F + + ++G V E F +
Sbjct: 87 TSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISI 146
Query: 222 IVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK-------------- 267
+ Y A G + + M + +P +N + LVS
Sbjct: 147 MRDYDKAGFPG---QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 203
Query: 268 ----PGGLSKYYLQQAEFIFHNLLTSGLEIQKD-----------IYSGLIWLHSYQDNID 312
P L + + N + S L + +D IY LI S + ++
Sbjct: 204 SRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 263
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
E + LL +EM G E V+ K + +A K R+L + Y
Sbjct: 264 -EALQLL-EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGY 321
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET- 431
M KIG + ++F R+ + ++ +I + ++++ + V +
Sbjct: 322 LMNGLCKIGRVDAAKDLFY----RIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 377
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKA 490
G+ P + +Y +L Y G+ + K C+PN Y I ++ G I++A
Sbjct: 378 GIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 437
Query: 491 EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+ N M +D + NT N ++SA+ +A +I+
Sbjct: 438 YNLLNEMSADG-LKPNTVGFNCLISAFCKEHRIPEAVEIF 476
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 123/281 (43%), Gaps = 17/281 (6%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ TF +I + A G + A I++ M + G P++H F ALV G +
Sbjct: 551 PTSRTFMPIIHGFARA---GEMRRALEIFDMMRRSGCI---PTVHT--FNALVL--GLVE 600
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
K +++A I + +G+ + Y+ + ++ Y D + +++ G E
Sbjct: 601 KRQMEKAVEILDEMALAGVSPDEHTYTTI--MNGYAALGDTGKAFEYFTKLRNEGLELDV 658
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIF 390
++L+ C K G ++ A + S IP FVY + + +A+ G+ ++ ++
Sbjct: 659 FTYEALLKACCKSGRMQSALAVTREM--SAQNIPRNTFVYNILIDGWARRGDVWEAADLM 716
Query: 391 REMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNL 450
++M++ + Y I CKA + ++E G+KP + +Y L + +
Sbjct: 717 QQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACA 776
Query: 451 GMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKA 490
+ ++ F E L +P++ +Y + SL + + +A
Sbjct: 777 SLPEKALRCFEEMKLAGLKPDKAVYHCLMTSLLSRATVAEA 817
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 136/328 (41%), Gaps = 16/328 (4%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ F +++ Y +G + A + M ++ G P ++ SL A
Sbjct: 300 PARREFGLMVGYYAR---RGDMHRARQTFESM-RVRGIYPSSHVYTSLIHAYAVGRD--- 352
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK----ERISLLKKEMQQAGF 328
+++A + G+E+ YS ++ + N D+ +R L +EM++ G
Sbjct: 353 ---MEEALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGI 409
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
+ ++ +++ G+ E + RL E ++ + Y K+G+ K+LE
Sbjct: 410 DAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALE 469
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+ + M+ ++ Y +I K ++ ++ ++ ++ G+KP + Y N+ +
Sbjct: 470 VSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFC 529
Query: 449 NLGMHDR-LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
+G DR +H+ ++ RP + + AG + +A EIF+ M I
Sbjct: 530 GMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPT-V 588
Query: 508 RSCNIILSAYLSSGDFVKAEKIYDLMCL 535
+ N ++ + KA +I D M L
Sbjct: 589 HTFNALVLGLVEKRQMEKAVEILDEMAL 616
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 130/338 (38%), Gaps = 51/338 (15%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
KC +F + G PS +++ LI Y G + +A + ++M++ G + H
Sbjct: 431 KCLIVFKRLKECGFAPSVISYGCLINMYTK---MGKVSKALEV-SKMMESAGIK-----H 481
Query: 258 N-SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERI 316
N + L++ G L A +F +++ GL+ +Y+ +I N+D R
Sbjct: 482 NMKTYSMLIN--GFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMD--RA 537
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEA 376
+ KEMQ+ + ++
Sbjct: 538 IHMVKEMQKKRHRPTSRTFMPII-----------------------------------HG 562
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
+A+ GE ++LEIF M+ +V ++ ++ L + + E ++ E G+ P
Sbjct: 563 FARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPD 622
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
+Y + N Y LG + F++ E + Y L++ +G ++ A +
Sbjct: 623 EHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTR 682
Query: 496 HMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M S Q I NT NI++ + GD +A + M
Sbjct: 683 EM-SAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQM 719
>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 146/349 (41%), Gaps = 39/349 (11%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
K + ++ +G P T++ LI Y + EA S+ +RM + G P +
Sbjct: 221 KAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF---EALSVQDRM-ERSGVAPNIVTY 276
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI------YSGLIWLHSYQDNI 311
NS S+ G +++A +F EI+ D+ Y+ LI + ++I
Sbjct: 277 NSFIHGF-SREG-----RMREATRLFR-------EIKDDVTANHVTYTTLIDGYCRMNDI 323
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL----LESDNGIPT 367
D+ L++ M+ GF G S+LR ++G + +A + + +E DN I
Sbjct: 324 DEAL--RLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDN-ITC 380
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKE 427
+ AY KI + + ++++ ++M E + +Y +I CK E E + +
Sbjct: 381 NTLI---NAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFS 437
Query: 428 FVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK---CRPNRTIYGIYLESLKNA 484
+E G P +Y L + + N D + E EK C + +Y + +
Sbjct: 438 MIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE-FEKRGLC-ADVALYRGLIRRICKL 495
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++ A+ +F M +G ++ + AY +G +A ++D+M
Sbjct: 496 EQVDYAKVLFESMEKKGLVG-DSVIFTTMAYAYWRTGKVTEASALFDVM 543
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 91/233 (39%), Gaps = 17/233 (7%)
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
K+M + G V ++ C+K GD E AEK + E G+ F Y + Y
Sbjct: 192 KKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEE--KGVFPDIFTYNTLISVYC 249
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
K ++L + M+ + ++ Y+ I + L +E ++ +
Sbjct: 250 KKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHV 308
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
+Y L + Y + D L E +E P Y L L G I +A +
Sbjct: 309 TYTTLIDGYCRMNDIDE-ALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTE 367
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLD 549
M S + I + +CN +++AY D V A K+ KK IES KLD
Sbjct: 368 M-SGKKIEPDNITCNTLINAYCKIEDMVSAVKV------KKKMIESGL--KLD 411
>gi|255584218|ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527384|gb|EEF29525.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 166/392 (42%), Gaps = 75/392 (19%)
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQ-GCLDEACSIYNRMIQLGGYQPRP 254
F + +++ +P +L + +S +Q G ++ A +N+M+ G P
Sbjct: 60 FFTVSSLLENLTEPISIPCPKISSLLYESIISVYIQSGSIELAVLYFNQMVD-KGLVFEP 118
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYS-GLIWLHSYQDNIDK 313
++ N+L +LV SK + ++ F+F+ + +I+ D+Y+ G++ + +
Sbjct: 119 NIFNTLLDSLVK-----SKCF-EKLWFVFNEVKG---KIELDVYTYGIMIKGCCEAGVFY 169
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD----------- 362
+ LL ++++ G + +++ C K GDV A+ + ++ E +
Sbjct: 170 KGFELLT-DLEKMGLSPNVVIYTTLIDGCCKNGDVRRAKLLFNKMGEVNLVANQYTYTVL 228
Query: 363 ----------------------NGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLG 398
+G+ + Y + + G+ K+ E+F EM +R
Sbjct: 229 INGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDEMCKRGV 288
Query: 399 SASVPAYHKIIELLCKA----EETELTES-----------------LMKEFVETGMKPLM 437
++V Y+ +I LC+ E +L + L++E E G+ P
Sbjct: 289 VSNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGYSNGGNWVDVTDLVREMEERGISPSK 348
Query: 438 PSYINLTNMYLNLG-MHDRLHLAFSECLEKCR--PNRTIYGIYLESLKNAGNIEKAEEIF 494
+Y LTN ++ LG M H F +EK P+ IYG+ L L GN+++A ++F
Sbjct: 349 VTYTILTNAHVRLGDMEKAFH--FYSSMEKVGLVPDVHIYGVLLHGLCVKGNMKEASKLF 406
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
M ++ + N N +++ Y +G+ +A
Sbjct: 407 RSM-AEMKLEPNEVVYNTMINGYCKAGNSFRA 437
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 104/274 (37%), Gaps = 29/274 (10%)
Query: 352 EKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
EK W E I + Y + + + G F K E+ ++++ S +V Y +I
Sbjct: 135 EKLWFVFNEVKGKIELDVYTYGIMIKGCCEAGVFYKGFELLTDLEKMGLSPNVVIYTTLI 194
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH-DRLHLAFSECLEKCR 468
+ CK + + L + E + +Y L N + G+ D L L+
Sbjct: 195 DGCCKNGDVRRAKLLFNKMGEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVF 254
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
PN Y + N G + KA E+F+ M + N + N ++S +AEK
Sbjct: 255 PNLYTYNCMINEFCNEGKLHKAYELFDEMCKRGVVS-NVVTYNTLISGLCRKTRIWEAEK 313
Query: 529 IYDLMCLKKYEIESAWMEKLDYVLSLNRKEVK-KPVSLNL------------------SS 569
+ D M Y W++ D V + + + V+ + SS
Sbjct: 314 LVDQMKRAGYSNGGNWVDVTDLVREMEERGISPSKVTYTILTNAHVRLGDMEKAFHFYSS 373
Query: 570 EQRENLI------GLLLGGLCIESDEKRKRHMIR 597
++ L+ G+LL GLC++ + K + R
Sbjct: 374 MEKVGLVPDVHIYGVLLHGLCVKGNMKEASKLFR 407
>gi|405124125|gb|AFR98887.1| pentatricopeptide repeat protein [Cryptococcus neoformans var. grubii
H99]
Length = 1462
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 23/299 (7%)
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED----AEKTWLRLLESDNGIPTPA 369
E L + + QAGF + +++ A D D A + W L G+
Sbjct: 1077 EEAGLHRARIVQAGFSPNADAYATMI---ASSKDTTDDALVARELWEEAL--GMGVKPHL 1131
Query: 370 FVYK--MEAYAKIGEFMKSLEIFREMQ-ERLGSASVPAYHKIIELLCKAEETELTESLMK 426
F+Y + +K + +L++F M+ ER+ +SV Y +I C+ + E+L +
Sbjct: 1132 FLYNTVISKLSKARKAESALDLFMRMKSERIRPSSV-TYGAVINACCRVGDALSAETLFE 1190
Query: 427 EFV-ETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGIYLESLKN 483
E + +P +P Y + YL + L + L++ R P+ Y + L++
Sbjct: 1191 EMTSQPNFRPRVPPYNTMMQFYLQTQPNRERFLYYYGALQRARVPPSAHTYKLLLDAYAT 1250
Query: 484 AG--NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY-LSSGDFVKAEKIYDLMCLKKYEI 540
+I E +F+H+ +D+++ V ++SAY + +GD KAE++++ + K +
Sbjct: 1251 LPPIDIPTMELVFSHLIADKSVRVQGTHWASLISAYGIHAGDVKKAEEVFNKIPAKGGDY 1310
Query: 541 ES----AWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHM 595
E+ AW+ L ++ + E + L + + +L+ G + R R +
Sbjct: 1311 EAVVWEAWLNVLSQQGTIEQLEEARTRMLESGVQPTAYVYNVLINGYARAGNIGRAREV 1369
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 254 PSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS-GLEIQKDIYSGLIWLHSYQDNID 312
PS H ++ L+ L + E +F +L+ + +Q ++ LI +
Sbjct: 1236 PSAHT--YKLLLDAYATLPPIDIPTMELVFSHLIADKSVRVQGTHWASLISAYGIHAGDV 1293
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
K+ + K + G E V + L V +++G +E E+ R+LES G+ A+VY
Sbjct: 1294 KKAEEVFNKIPAKGGDYEAV-VWEAWLNVLSQQGTIEQLEEARTRMLES--GVQPTAYVY 1350
Query: 373 K--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
+ YA+ G ++ E+F M + + + P H ++
Sbjct: 1351 NVLINGYARAGNIGRAREVFESMGDSITGVAAPNNHPVL 1389
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 150/355 (42%), Gaps = 24/355 (6%)
Query: 172 QQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQ 231
++ +R D + + +E + K ++I +++ ++G +P +T+ +I +
Sbjct: 400 EERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQ---E 456
Query: 232 GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK---YYLQQAEFIFHNLLT 288
+D+A + +M + G +P + +L L L + + ++ N +T
Sbjct: 457 RKVDQAKKMLRQMYK-HGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAIT 515
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG-FEEGKEVLLSVLRVCAKEGD 347
YS + +H ++ L +EM + G F E+ L + +C +E
Sbjct: 516 ---------YS--VLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEE-K 563
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
V++A++ + L + + F + + + + +L + +M V Y
Sbjct: 564 VDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTT 623
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC 467
II+ L K E L + + G+ P +Y + + Y +G + L + L +
Sbjct: 624 IIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR- 682
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNH-MHSDQTIGVNTRSCNIILSAYLSSG 521
+ RT Y +E L + GN+E+A ++ + + I NT C++++ +YLS G
Sbjct: 683 QECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANT--CHMLIESYLSKG 735
>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 148/344 (43%), Gaps = 29/344 (8%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
K + ++ +G P T++ LI Y + EA S+ +RM + G P +
Sbjct: 221 KAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF---EALSVQDRM-ERSGVAPDIVTY 276
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDI-YSGLIWLHSYQDNIDKERI 316
NSL S+ G +++A +F + G+ + + Y+ LI + ++ID+
Sbjct: 277 NSLIHGF-SREG-----RMREATRLFRKI--KGVVMANHVTYTTLIDGYCRMNDIDEAL- 327
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL----LESDNGIPTPAFVY 372
L++ M+ GF G S+LR ++G + +A + + +E DN I +
Sbjct: 328 -RLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVKKIEPDN-ITCNTLI- 384
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
AY KI + + ++++ ++M E + +Y +I CK E + + + +E G
Sbjct: 385 --NAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELDNAKEELFSMIEKG 442
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK---CRPNRTIYGIYLESLKNAGNIEK 489
+ P +Y L + + N D + E EK C P+ +Y + + ++
Sbjct: 443 LSPGYSAYSWLVDGFYNQNKQDEI-TKLPEEFEKRGLC-PDVALYRGLIRRICKLEQVDY 500
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A+ +F M +G ++ + AY +G A ++D+M
Sbjct: 501 AKVLFESMEKKGLMG-DSVIYTTMAYAYWRTGKVTDASALFDVM 543
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 126/315 (40%), Gaps = 37/315 (11%)
Query: 247 LGGYQPRPSLHNSLFRALV---SKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
+GG P + + +F L+ +K G + + +F +++ GL+ + L+
Sbjct: 122 VGGVSEDPEVLSHVFSWLMIFYAKSG-----MINDSIAVFEQIMSCGLKPHLQACTVLL- 175
Query: 304 LHSYQDNIDKERIS----LLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
+++ KER++ + K+M + G V ++ C+K GD E AEK +
Sbjct: 176 -----NSLVKERLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEME 230
Query: 360 ESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
E G+ F Y + Y K ++L + M+ + + Y+ +I +
Sbjct: 231 E--KGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGR 288
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK---CRPNRTIY 474
L ++ M + +Y L + Y + D L E +E C P Y
Sbjct: 289 MREATRLFRKIKGVVMANHV-TYTTLIDGYCRMNDIDE-ALRLREVMESRGFC-PGVVTY 345
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
L L G I +A + M S + I + +CN +++AY D V A K+
Sbjct: 346 NSILRKLCEDGRIREANRLLTEM-SVKKIEPDNITCNTLINAYCKIEDMVSAVKV----- 399
Query: 535 LKKYEIESAWMEKLD 549
KK IES KLD
Sbjct: 400 -KKKMIESGL--KLD 411
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 149/355 (41%), Gaps = 25/355 (7%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI----LIVAYLSAPVQGCLDEACSIY 241
+A + KE + + I +D+++ G MT H +VA+L + L+ SI
Sbjct: 367 IAKALCKEGEMERAERILEDMLSIG-----MTVHCGLFNTVVAWLLQRTRR-LESVVSIT 420
Query: 242 NRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGL 301
N M+ G +P L + R L GG K+ Q+A I+ L GL + + L
Sbjct: 421 NEMVTRG-MRPNDPLMTACMRELCK--GG--KH--QEAVGIWFKTLNKGLGVNLATSNAL 473
Query: 302 IWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES 361
I H + + + + + M G E ++R C K+ +E+A K L +
Sbjct: 474 I--HGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIK--LHGDMT 529
Query: 362 DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
G F + + AY +G+ ++ + +M+ + +Y II+ CKA++
Sbjct: 530 RRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIR 589
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYL 478
+ + E ++ G+KP + Y L Y G + + + +P YG +
Sbjct: 590 KAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLM 649
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ +AG +E+A+ IF+ + + + I++ Y G V+A ++ M
Sbjct: 650 YWMCHAGLVEEAKTIFSQAR-ENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEM 703
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 109/271 (40%), Gaps = 22/271 (8%)
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
+ D+++ LH+Y + E L +M+ G + +++ K D+ A++
Sbjct: 534 KPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKE 593
Query: 354 TWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
L+ D G+ F+Y + Y + G+ +++ M+ + Y ++
Sbjct: 594 YLTELM--DRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYW 651
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPN 470
+C A E +++ + E + + Y + Y LG F E + PN
Sbjct: 652 MCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPN 711
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG--------------VNTRSCNIILSA 516
+ Y + + +GN E+A ++F+ M I VN+ +I +A
Sbjct: 712 KLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTA 771
Query: 517 YLSSGDFVKAEKIYDLMCLKKYEIESAWMEK 547
LSSG K +++Y+++ I + W +K
Sbjct: 772 ELSSGALTKDDRMYNIL---SNGINAPWCQK 799
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 108/252 (42%), Gaps = 12/252 (4%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K+ K + + D+ +G P TF+ L+ AY + G ++E + ++M + G Q
Sbjct: 514 KDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNL---GKMEETFHLLDQM-KTEGLQ 569
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P + ++ G +++A+ L+ GL+ IY+ LI Y N
Sbjct: 570 PDIVSYGTII------DGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIG--GYGRNG 621
Query: 312 DKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFV 371
D + M+ G + S++ G VE+A+ + + E++ + +
Sbjct: 622 DISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYT 681
Query: 372 YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
++ Y K+G+ ++++ F EM+ R S + Y ++ K+ +E L E V +
Sbjct: 682 IMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGS 741
Query: 432 GMKPLMPSYINL 443
G+ P +Y L
Sbjct: 742 GVIPDNITYGTL 753
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 2/197 (1%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
KEG V++AE ++++ + + M+ Y + E + +F M + + V
Sbjct: 279 CKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDV 338
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
Y +I LCK + + +L +E + M P +Y +L + G + F E
Sbjct: 339 HCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDE 398
Query: 463 CLEKCRPNRTI-YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
L++ +P I Y +++L G++++A +FN M DQ I N + I+L G
Sbjct: 399 MLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKM-KDQAIRPNVYTFTILLDGLCKVG 457
Query: 522 DFVKAEKIYDLMCLKKY 538
A + + + K Y
Sbjct: 458 RLKNALEFFQDLLTKGY 474
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 100/533 (18%), Positives = 204/533 (38%), Gaps = 78/533 (14%)
Query: 2 LTISTQTLPSITLSLQRHVSFFPHVTTVR-TPRSYHFLSAPLSSATSQSTFVEQLAGEKD 60
L + +LP +T + VS F H+ V TP ++HF + + ++
Sbjct: 25 LCFHSHSLPPLTHNADDAVSQFNHMFHVHPTPHTFHF----------NKILISLVNVKRY 74
Query: 61 SSQEEKWDMFKNSDAESGSVDFDVGTAGSEMRHLGEPVVE---VIELEELPEQWRRAKLA 117
+ + + S+ E F + + H G+ V+ V ++ +L Q L
Sbjct: 75 PTAISLYKQMELSEVEPDY--FTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLN 132
Query: 118 WLCKELPSHKGGTLVRILNAQKKWLRQ-------EDGTYLAVHCMRIRENETGFRVYEWM 170
L K L G + L K L Q G + C +I E R+ +
Sbjct: 133 TLMKGLCLE--GKVKEALRFHDKVLAQGFRLSGISYGILINGVC-KIGETRAAIRLLRRI 189
Query: 171 MQQHW-YRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
+ W R + + + + D + K+ + D++ +++ +G P +T+ IL+ +
Sbjct: 190 --ERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFC--- 244
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
+ G L+ A + N M+ L P + L AL K G +++AE + ++ +
Sbjct: 245 IVGQLNRAIDLLNEMV-LENINPDIYTYTILVDAL-CKEGK-----VKEAENVLAVMVKA 297
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
+ + +YS L+ +G ++ +V
Sbjct: 298 CVNLDVVVYSTLM---------------------------DGYCLV----------NEVN 320
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
+A++ + + + + + KI ++L +F E+ ++ Y +I
Sbjct: 321 NAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLI 380
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-R 468
+ LCK+ L E ++ G P + +Y NL + G DR F++ ++ R
Sbjct: 381 DCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIR 440
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
PN + I L+ L G ++ A E F + + + +N R+ ++++ G
Sbjct: 441 PNVYTFTILLDGLCKVGRLKNALEFFQDLLT-KGYCLNVRTYTVMINGLCKEG 492
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 139/350 (39%), Gaps = 18/350 (5%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L +++ K KFA+ ++FDD++ +G P T+ +I G A + +
Sbjct: 172 TTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKI---GETAAAAGLLKK 228
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M + G QP ++++ + + +A IF + G I DI++
Sbjct: 229 M-EEAGCQPNVVTYSTIIDS------HRKDRRVNEALDIFSYMKVKG--ISPDIFTYNSL 279
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ + + S L EM+ ++ KEG V +A+ + E
Sbjct: 280 IQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEM-- 337
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
G+ Y M Y+ E +++ ++F M + V +Y+ +I CK + +
Sbjct: 338 GVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEA 397
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLES 480
+ L E + G+ P SY L + LG + + +L + PN Y I L+
Sbjct: 398 KQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDG 457
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
G KA +F M S + N NI++ A SG+ A K++
Sbjct: 458 FCKQGYFGKAFRLFRAMQSTYS-KPNLVMYNILIDAMCKSGNLRDARKLF 506
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 119/289 (41%), Gaps = 17/289 (5%)
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL 271
+P +TF++L+ +G + EA + M ++G +P ++SL G
Sbjct: 305 MPDIVTFNVLVDTICK---EGKVSEAQGVLKTMTEMG-VEPDVVTYSSLMY------GYS 354
Query: 272 SKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEG 331
+ + +A +F ++T G + D++S I ++ Y + L EM G
Sbjct: 355 LRSEVVEARKLFDAMITKG--CKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPN 412
Query: 332 KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEI 389
+++ + G + +A + + + ++ +P F Y ++ + K G F K+ +
Sbjct: 413 NVSYNTLIHGLCQLGSLREA-RNLFKNMHTNGNLPN-LFTYSILLDGFCKQGYFGKAFRL 470
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
FR MQ ++ Y+ +I+ +CK+ L E G++P Y + N
Sbjct: 471 FRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCK 530
Query: 450 LGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
G+ D AF E C P+ Y + + + + +A ++ M
Sbjct: 531 EGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEM 579
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 8/264 (3%)
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
+ S ++ + Y D + ISL K+M+ AG L ++ + V+ A
Sbjct: 103 LLSAIVKMGQYYDTV----ISL-TKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLA 157
Query: 357 RLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
++++ F + K+G+F +++E+F +M R V Y II LCK
Sbjct: 158 KIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIG 217
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYL-NLGMHDRLHLAFSECLEKCRPNRTIYG 475
ET L+K+ E G +P + +Y + + + + +++ L + ++ P+ Y
Sbjct: 218 ETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYN 277
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCL 535
++ L N ++A + N M S I + + N+++ G +A+ + M
Sbjct: 278 SLIQGLCNFSQWKEASALLNEMRS-LNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTE 336
Query: 536 KKYEIESAWMEKLDYVLSLNRKEV 559
E + L Y SL R EV
Sbjct: 337 MGVEPDVVTYSSLMYGYSL-RSEV 359
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 20/281 (7%)
Query: 134 ILNAQKKW-LRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
+ +A KW LR +Y L +R+ + + GFR+ M+ + D + L + +
Sbjct: 164 VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG-VQPDVYTYSVLINGL 222
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
KE K ++FD+++ +G VP+ +TF LI + G +D A IY +M+
Sbjct: 223 CKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK---NGRVDLAMEIYKQMLS-QSL 278
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
P +N+L L K L+QA + + GL+ K Y+ LI + +
Sbjct: 279 SPDLITYNTLIYGLCKKGD------LKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGD 332
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
+D +K M Q + +++ +EG DAEK +L G+ A
Sbjct: 333 LDSAFEH--RKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSV--GLKPDAR 388
Query: 371 VYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
Y M + K G+ K ++ +EMQ SV Y+ ++
Sbjct: 389 TYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLM 429
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 18/220 (8%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD---NGIPTPAFVYKME 375
LK M +G + ++ KE ++DA + + +L NG+ F ++
Sbjct: 199 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV---TFTTLID 255
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ K G ++EI+++M + S + Y+ +I LCK + + L+ E G+KP
Sbjct: 256 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKP 315
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSE----CLEKCRPNRTIYGIYLESLKNAGNIEKAE 491
+Y L + G D AF E R + Y + L G AE
Sbjct: 316 DKITYTTLIDGCCKEGDLDS---AFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAE 372
Query: 492 EIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKI 529
++ M S +G+ + R+ +I++ + GD K K+
Sbjct: 373 KMLREMLS---VGLKPDARTYTMIINEFCKKGDVWKGXKL 409
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 66/155 (42%), Gaps = 1/155 (0%)
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP 403
+ G + DA + + E +P +E K+ F + E+ E AS+
Sbjct: 84 ESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLY 143
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSE 462
++ ++ CK + J +S+ + G++P + SY L N Y+ LG + + L +
Sbjct: 144 FFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 203
Query: 463 CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+P+ Y + + L ++ A E+F+ M
Sbjct: 204 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEM 238
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 155/402 (38%), Gaps = 40/402 (9%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
RV++ M+ D T L + + R A R +FD++ G S ++ ++
Sbjct: 133 ALRVFD-QMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAVSTHVYNAML 191
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG------------- 269
L A G A ++ RM G R S +N++ AL K G
Sbjct: 192 HVCLKA---GDAARAEALVTRMDAAGVPLDRFS-YNTVI-ALYCKKGMRYEAMCVRDRMD 246
Query: 270 ----------------GLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
GL KY +++A +F + + Y+ LI + NI
Sbjct: 247 KEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNI- 305
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
E L+ EM+ G G ++LR ++G +++ + + E
Sbjct: 306 -EEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNT 364
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
+ AY K G + ++ ++M E + Y +I CKA+E + + + V+ G
Sbjct: 365 LINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAG 424
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAE 491
P + L + + D + L E +++ P++ +Y + L G +++A+
Sbjct: 425 FSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQ 484
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++F+ M S +G + + + YL+ G V A D M
Sbjct: 485 KVFDQMQSKGLVGDSLVYATLAYT-YLTEGKPVAASNTLDGM 525
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 110/259 (42%), Gaps = 4/259 (1%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+++A+ +F + G+E +Y+ +I + N+ +R +L EM G
Sbjct: 315 IEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNV--KRALVLFDEMTDKGLIPSAHTY 372
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
+++ K G +E A+ + + F ++ Y + G ++L + M++
Sbjct: 373 GALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEK 432
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
+ + V AY+ I LCK + + L+ VE G+ P S+ L ++Y G
Sbjct: 433 KGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVE 492
Query: 456 LHLAFSECLEKCR-PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
F E EK PN Y + ++ GN+++A ++ + + + I + +C ++
Sbjct: 493 AKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIP-DVYTCTSLI 551
Query: 515 SAYLSSGDFVKAEKIYDLM 533
G A K++D M
Sbjct: 552 HGECIDGKVDMALKLFDEM 570
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 106/246 (43%), Gaps = 9/246 (3%)
Query: 254 PSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
PS H + AL+ G ++ A+ + + + G+++ I++ LI + +D+
Sbjct: 367 PSAHT--YGALIH--GVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDE 422
Query: 314 E-RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
R+ ++ M++ G E S+ K ++A+ ++E T +F
Sbjct: 423 ALRLQVV---MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT 479
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++ Y K G F+++ +FREM+E+ ++ Y+ +I+ K + L E G
Sbjct: 480 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 539
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAE 491
+ P + + +L + G D F E ++ PN Y + L G E+A
Sbjct: 540 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 599
Query: 492 EIFNHM 497
++++ M
Sbjct: 600 KLYDEM 605
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 115/287 (40%), Gaps = 19/287 (6%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+FD++ ++G +PS T+ LI A G ++ A + N M Q G P + N+L
Sbjct: 356 LFDEMTDKGLIPSAHTYGALIHGVCKA---GQMEAAQMLVNEM-QGKGIDLNPVIFNTLI 411
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
G+ L+ + L S + I SGL L+ K+ L
Sbjct: 412 DGYCES--GMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNR------KDEAKGLLF 463
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
M + G +++ + KEG+ +A++ + + E N + ++ Y+K G
Sbjct: 464 SMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRG 523
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
++ ++ E++ R V +I C + ++ L E + G L+P+ +
Sbjct: 524 NMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRG---LVPNVV 580
Query: 442 NLTNMYLNLGMHDRLHLAF---SECLEK-CRPNRTIYGIYLESLKNA 484
T M L R AF E E P+ T+Y + SL +A
Sbjct: 581 TYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 627
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 136/324 (41%), Gaps = 14/324 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + + + + + D++ + P +T++ILI A +G + EA + M+
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK---EGRILEALGVLVMMM 432
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ G +P +N++ G + + A+ IF+ ++ SGLE DI + + ++
Sbjct: 433 K-KGVKPNIVTYNAMMD------GYCLRNNVNVAKDIFNRMVKSGLE--PDILNYNVLIN 483
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
Y + +L KEM+ S++ G + ++ + +S
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSP 543
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
+ ++A+ K F K++ +FR++ E + H I++ LCK E+ ++ E +
Sbjct: 544 DVITYNILLDAFCKTQPFDKAISLFRQIVEGIW-PDFYTNHAIVDNLCKGEKLKMAEDAL 602
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI-YGIYLESLKNA 484
K + G P + +Y L N G L S+ + RP I + I + L
Sbjct: 603 KHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQR 662
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTR 508
+KAE++ M + + + R
Sbjct: 663 NETDKAEKLREEMIARGLVNIEKR 686
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 68/370 (18%), Positives = 147/370 (39%), Gaps = 39/370 (10%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
MM + + D L + + R++F+ ++ +G P + +++LI Y
Sbjct: 290 MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK 349
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY---------YLQQAE 280
+ +DEA ++ + P + +NSL L + G +S Q +
Sbjct: 350 M---VDEAMVLFKELCN-KNLVPTIASYNSLIDGLCNS-GRISHVKKLLDEMHGSAQPPD 404
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ +N+L L + I L L + ++KK G + +++
Sbjct: 405 VVTYNILIDALCKEGRILEALGVL-----------VMMMKK-----GVKPNIVTYNAMMD 448
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLG 398
+V A+ + R+++S G+ Y + Y K +++ +F+EM+ +
Sbjct: 449 GYCLRNNVNVAKDIFNRMVKS--GLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
+ +Y+ +I+ LC + L+ E ++G P + +Y L + + D+
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566
Query: 459 AFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNH--MHSDQTIGVNTRSCNIILSA 516
F + +E P+ +++L ++ AE+ H MH N ++ I+++A
Sbjct: 567 LFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHG---CSPNVQTYTILINA 623
Query: 517 YLSSGDFVKA 526
G F +A
Sbjct: 624 LCKDGSFGEA 633
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 76/192 (39%), Gaps = 2/192 (1%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
KEG + +A+ + + + ME Y ++ E+F M +R V
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
Y+ +I+ CK + + L KE + P + SY +L + N G + E
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395
Query: 463 CLEKCRPNRTI-YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
+P + Y I +++L G I +A + M + + N + N ++ Y
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK-KGVKPNIVTYNAMMDGYCLRN 454
Query: 522 DFVKAEKIYDLM 533
+ A+ I++ M
Sbjct: 455 NVNVAKDIFNRM 466
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 122/304 (40%), Gaps = 18/304 (5%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
+ R + D++ +G P E++ H I++ L + LDEA I M +G
Sbjct: 177 RVGAARRMLDEMARKGCRPDEVS-HTTIISALCKLDR--LDEARGILAEMTPVGAS---- 229
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
+N++ AL + + +++ + ++ GL Y+ ++ ++ +
Sbjct: 230 --YNAVVHALCGQ------FRMREVFLVVDEMVHRGLRPDTVAYTSIVG--AFCKARELR 279
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM 374
+ M G + +++ +G V DA W ++ T ++ +
Sbjct: 280 MACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLI 339
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
IG+ ++L +F M + V Y +I+ KA + ++ S+ + G K
Sbjct: 340 RGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCK 399
Query: 435 PLMPSYINLTNMYLNLGMHDRL-HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEI 493
P + Y N+ ++ M D+ +L LE C PN + + SL + G +A +
Sbjct: 400 PNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNV 459
Query: 494 FNHM 497
F+ M
Sbjct: 460 FHGM 463
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 145/381 (38%), Gaps = 22/381 (5%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
C + R E V E M R D T + K R+ I ++ +G VP
Sbjct: 238 CGQFRMREVFLVVDE--MVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVP 295
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK 273
+ TF +L+ + G + +A ++N M+ G+ P +N L R L
Sbjct: 296 NVQTFTVLVKGFFD---DGKVHDALGMWNWMVA-EGWAPSTISYNVLIRGLCHIGD---- 347
Query: 274 YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKE 333
L++A F+F + S YS LI S ++D + +M AG +
Sbjct: 348 --LKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMS--IWNDMTNAGCKPNVV 403
Query: 334 VLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREM 393
V +++ V K+ + AE ++ + T F + + +G ++L +F M
Sbjct: 404 VYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGM 463
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM- 452
+ + Y++++ L + E ++ E + G + + SY + + M
Sbjct: 464 RRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMI 523
Query: 453 HDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI 512
+ + L ++ +P+ + + + GN+ A + M + VN NI
Sbjct: 524 KEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDA-----VNCPR-NI 577
Query: 513 ILSAYLSSGDFVKAEKIYDLM 533
+ L SG K+ D M
Sbjct: 578 VAYTSLMSG-LCSQHKLDDAM 597
>gi|326435879|gb|EGD81449.1| hypothetical protein PTSG_11845 [Salpingoeca sp. ATCC 50818]
Length = 695
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/376 (17%), Positives = 140/376 (37%), Gaps = 52/376 (13%)
Query: 119 LCKELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRF 178
LCKEL + + L++ + + ++ + R E + +++ + +QH R
Sbjct: 336 LCKELSAARA--LLQTMRQAGVEPTMDTHAFVMMAHGRAYEADMALAMFDSLQRQH-TRL 392
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
++ + D + + + + R +FD ++ G P+
Sbjct: 393 SLSVYLCIMDALAQTAQPQEARAVFDTMVRSGIAPTT----------------------- 429
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
+ YN++++ + P L A + + GL + Y
Sbjct: 430 TAYNKLVKAYAHSRSPEL----------------------AARVVDTMRGDGLLPNETTY 467
Query: 299 SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRL 358
W++ Y D L EMQ G + + ++ A G+V A R+
Sbjct: 468 R--CWMYGYARTRDPAGAEALLHEMQLHGMQPCAQTFNILVYCYAMAGEVGTARAVIDRM 525
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
+E T +F AY + + +M E + ++ Y+ +I+ C +
Sbjct: 526 IECGERPLTVSFNVLANAYGRQHNLDALRALVTDMAEANVAPNLVTYNTLIKSFCMNHQV 585
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIY 477
+ E+ + +E+G+ + ++ L Y G D L L F C+ C PN+ ++ +
Sbjct: 586 DKAEATVGRMIESGLAGDLSTWGALAGAYARKGHIDSLLLTFRRCIAGGCLPNKQMFDMV 645
Query: 478 LESLKNAGNIEKAEEI 493
+ L A ++ +AE +
Sbjct: 646 VFLLSRA-SVPEAERL 660
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 127/293 (43%), Gaps = 22/293 (7%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+++E +T V++ MM+Q + +F L D ++ K + IF+ + G P
Sbjct: 310 KMKEGKT---VFDMMMKQ-GIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
++ I+I + DEA +++ M P ++SL L SK G +S Y
Sbjct: 366 QSYSIMINGFCKIKK---FDEAMNLFKEM-HRKNIIPDVVTYSSLIDGL-SKSGRIS-YA 419
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
LQ + + + + I L H +DK I+LL K + GF+
Sbjct: 420 LQLVDQMHDRGVPPNICTYNSILDALCKTHQ----VDKA-IALLTK-FKDKGFQPDISTY 473
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
+++ + G +EDA K + LL + A+ ++ + G F ++L + +M++
Sbjct: 474 SILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMED 533
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
Y II L K +E ++ E L++E + G+ PL N ++YL
Sbjct: 534 NGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL-PL-----NFYDLYL 580
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 127/303 (41%), Gaps = 15/303 (4%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF--IFHNLLTSGL 291
+D+A S++NR+++ P + L + SK Y Q+ EF I NL+ +
Sbjct: 66 VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125
Query: 292 EIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
I GLI S+ K ++ G+ ++ + +G ++ A
Sbjct: 126 LINCFCQLGLIPF----------AFSVFAKILKM-GYVPDTITFTTLSKGLCLKGQIQQA 174
Query: 352 EKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
+++ ++ + K+GE +L++ + + L +V Y+ II+
Sbjct: 175 FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS 234
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPN 470
+CK + L E V G+ P + +Y L + + LG + D + L LE +P+
Sbjct: 235 MCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPD 294
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+ I + + G +++ + +F+ M Q I N + N ++ Y + KA+ I+
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMK-QGIKPNFVTYNSLMDGYCLVKEVNKAKSIF 353
Query: 531 DLM 533
+ M
Sbjct: 354 NTM 356
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 132/305 (43%), Gaps = 27/305 (8%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
D+F+ +I + P TF+IL+ A+ G + E ++++ M++ G +P +NSL
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCK---DGKMKEGKTVFDMMMK-QGIKPNFVTYNSL 336
Query: 261 FRA--LVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL 318
LV + + +A+ IF+ + G + DI S I ++ + +
Sbjct: 337 MDGYCLVKE--------VNKAKSIFNTMAQGG--VNPDIQSYSIMINGFCKIKKFDEAMN 386
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES--DNGIPTPAFVYK--M 374
L KEM + S++ +K G + A L+L++ D G+P Y +
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA----LQLVDQMHDRGVPPNICTYNSIL 442
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMK 434
+A K + K++ + + +++ + Y +I+ LC++ + E + ++ + G
Sbjct: 443 DALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYN 502
Query: 435 PLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEE 492
+ +Y + + G+ + LA +E C P+ Y I + SL + AE+
Sbjct: 503 LDVYAYTIMIQGFCVEGLFNE-ALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEK 561
Query: 493 IFNHM 497
+ M
Sbjct: 562 LLREM 566
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 134/309 (43%), Gaps = 17/309 (5%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
LD+A S +NR++ + P PS+ + F L++ + Y + + + +
Sbjct: 37 LDDALSSFNRLLHM---HPPPSIVD--FAKLLTSIAKMKHY----STVLSLSTQMDSFGV 87
Query: 294 QKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
++Y+ I ++S+ N S+L K + + G + +++R EG + +A
Sbjct: 88 PPNVYTLNILINSFCHLNRVGFAFSVLAK-ILKLGHQPDPTTFTTLIRGLCVEGKIGEAL 146
Query: 353 KTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
+ +++ D G Y + K+G ++ + R M++ V Y II+
Sbjct: 147 HLFDKMI--DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 204
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRP 469
LCK + +L + V G+ P + +Y +L + NL + ++ + K P
Sbjct: 205 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 264
Query: 470 NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
+ I+ +++L G + +A EI + M + + + + ++ + + +A K+
Sbjct: 265 DVVIFSTVVDALCKEGKVTEAHEIVD-MMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV 323
Query: 530 YDLMCLKKY 538
+D+M K +
Sbjct: 324 FDMMVRKGF 332
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/383 (19%), Positives = 153/383 (39%), Gaps = 49/383 (12%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L + E K + +FD +I++G P+ +T+ LI G A +
Sbjct: 130 TTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKV---GNTSAAIRLLRS 186
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M Q G QP ++ S+ +L + +A +F ++ G I DI++
Sbjct: 187 MEQ-GNCQPDVVIYTSIIDSLCKD------RQVTEAFNLFSQMVGQG--ISPDIFTYTSL 237
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK---------- 353
+H+ + + + ++ L +M + + +V+ KEG V +A +
Sbjct: 238 VHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGV 297
Query: 354 -----TWLRLL-------ESDNGIPT-------------PAFVYKMEAYAKIGEFMKSLE 388
T+ L+ E D + ++ + Y KI + K++
Sbjct: 298 EPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMY 357
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY-INLTNMY 447
+F EM + Y+ ++ LC + +L E V G P + +Y I L ++
Sbjct: 358 LFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLC 417
Query: 448 LNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNT 507
N + + + L + P+ +Y I ++ + AG +E A ++F+++ S + + +
Sbjct: 418 KNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNL-SSKGLHPSV 476
Query: 508 RSCNIILSAYLSSGDFVKAEKIY 530
+ NI++ G +A K++
Sbjct: 477 WTYNIMIHGLCKRGLLNEANKLF 499
>gi|226496595|ref|NP_001146253.1| uncharacterized protein LOC100279827 [Zea mays]
gi|219886401|gb|ACL53575.1| unknown [Zea mays]
Length = 666
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 143/345 (41%), Gaps = 15/345 (4%)
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL 271
VP T + ++V L A G L +A + + M+ G P P +++ L V G
Sbjct: 171 VPPSPTAYRVVVECLVAD-HGRLADAVKLKDEMLTSGFVGPDPKVYSLLMAGFVGAGDGA 229
Query: 272 SKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEM--QQAGFE 329
L Q G I I G + + +Y E++ KE+ ++
Sbjct: 230 KALELYQE----LKDKVGGEPILDGIVYGTL-MKAYFLMGTGEKVMECYKEVLCVESAVR 284
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN-----GIPTPAFVYKMEAYAKIGEFM 384
G E V+ + G +EDA K + R+LE + + +F ++ Y G F
Sbjct: 285 FGAESYNEVVDALGQNGRLEDALKLFDRMLEEHDTPLRIAVDLRSFRVMVDTYCAAGRFE 344
Query: 385 KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT 444
++ +FR M E V +Y+ +I L + + E L E E+G+ +Y+ LT
Sbjct: 345 DAVAVFRRMGEWKLVPDVASYNNLIRHLQINQLIDKAEVLYNEMCESGVGADKETYLLLT 404
Query: 445 NMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
++ D F + E + +P+ T Y ++ L ++KA+E FN M ++ +
Sbjct: 405 EACFSVDRIDDGISYFDKMDELELKPDATAYHKLIDGLVGFSMVDKAQEYFNQM-KEKGV 463
Query: 504 GVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL 548
+ S +L AY+++ A + + L + + S M +L
Sbjct: 464 NPSISSYETLLKAYIAADRLDDAVNVAKGILLNEKVLFSYGMREL 508
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 150/355 (42%), Gaps = 24/355 (6%)
Query: 172 QQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQ 231
++ +R D + + +E + K ++I +++ ++G +P +T+ +I +
Sbjct: 337 EERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQ---E 393
Query: 232 GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK---YYLQQAEFIFHNLLT 288
+D+A + +M + G +P + +L L L + + ++ N +T
Sbjct: 394 RKVDQAKKMLRQMYK-HGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAIT 452
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG-FEEGKEVLLSVLRVCAKEGD 347
YS + +H ++ L +EM + G F E+ L + +C +E
Sbjct: 453 ---------YS--VLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEE-K 500
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
V++A++ + L + + F + + + + +L + +M V Y
Sbjct: 501 VDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTT 560
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC 467
II+ L K E L + + G+ P +Y + + Y +G + L + L +
Sbjct: 561 IIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR- 619
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNH-MHSDQTIGVNTRSCNIILSAYLSSG 521
+ RT Y +E L + GN+E+A ++ + + I NT C++++ +YLS G
Sbjct: 620 QECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANT--CHMLIESYLSKG 672
>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
Length = 792
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 156/378 (41%), Gaps = 25/378 (6%)
Query: 155 MRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
+++ + R+ + M+ + D LAT L + K D+FD++++ G P+
Sbjct: 266 VKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPT 325
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY 274
+T+ +LI +G DE + +MI+ G L S + + G L
Sbjct: 326 NVTYGVLIKG---CDAEGMSDETYKLCRQMIEQG-------LLLSTYEFNLVIKGLLRDK 375
Query: 275 YLQQAEFIFHNLLTSGLEIQKDI--YSGLI-WLHSYQDNIDKERISLLKKEMQQAGFEEG 331
+ A + ++ +G+ D+ Y LI WL +Q E ++L K M++AG +
Sbjct: 376 RWKDAIGLLELVVDTGVP---DVFTYGCLIHWLCKHQKL--HEAVNLWDK-MKEAGVKPS 429
Query: 332 KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEI 389
S+L ++G +++A K + + D G P Y M+ Y K F + +
Sbjct: 430 IVTYHSLLLGYCEKGRMDEALKLYSEM--PDKGFPPNEVTYTTLMKGYIKKKAFDNAYAL 487
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
EM++ S Y+ +I L + ++K F+ G P +Y ++ N ++
Sbjct: 488 LNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVK 547
Query: 450 LGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTR 508
GM + + +K PN Y +++ + A ++ ++ D I +
Sbjct: 548 AGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDG-IQPDIA 606
Query: 509 SCNIILSAYLSSGDFVKA 526
+ N + + G+ +A
Sbjct: 607 AYNAFIDTFCKQGNMSRA 624
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 145/351 (41%), Gaps = 18/351 (5%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L ++ K +K + +++D + G PS +T+H L++ Y +G +DEA +Y+ M
Sbjct: 401 LIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCE---KGRMDEALKLYSEMP 457
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
G+ P + +L + G + K A + + + +G+ Y+ LI
Sbjct: 458 D-KGFPPNEVTYTTLMK------GYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILIN-G 509
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
Y N E +LK+ + + GF S++ K G + A + ++ + GI
Sbjct: 510 LYMVNRVCEVDEMLKRFLSE-GFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRK--KGI 566
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
Y ++ Y + ++++ ++ + AY+ I+ CK
Sbjct: 567 TPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALH 626
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLK 482
+ ++ G+ P + Y + Y NL M + +S ++ + IY ++
Sbjct: 627 FLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFS 686
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
GN+ A E+++ M ++ I + ++ + SGD A+++ D M
Sbjct: 687 KVGNVAFALELYSEMMANHVIP-DDKTFTALTHGLCRSGDIDGAKRLLDDM 736
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 110/259 (42%), Gaps = 4/259 (1%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+++A+ +F + G+E +Y+ +I + N+ +R +L EM G
Sbjct: 311 IEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNV--KRALVLFDEMTDKGLIPSAHTY 368
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
+++ K G +E A+ + + F ++ Y + G ++L + M++
Sbjct: 369 GALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEK 428
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
+ + V AY+ I LCK + + L+ VE G+ P S+ L ++Y G
Sbjct: 429 KGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVE 488
Query: 456 LHLAFSECLEKCR-PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
F E EK PN Y + ++ GN+++A ++ + + + I + +C ++
Sbjct: 489 AKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIP-DVYTCTSLI 547
Query: 515 SAYLSSGDFVKAEKIYDLM 533
G A K++D M
Sbjct: 548 HGECIDGKVDMALKLFDEM 566
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 106/246 (43%), Gaps = 9/246 (3%)
Query: 254 PSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
PS H + AL+ G ++ A+ + + + G+++ I++ LI + +D+
Sbjct: 363 PSAHT--YGALIH--GVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDE 418
Query: 314 E-RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
R+ ++ M++ G E S+ K ++A+ ++E T +F
Sbjct: 419 ALRLQVV---MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT 475
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++ Y K G F+++ +FREM+E+ ++ Y+ +I+ K + L E G
Sbjct: 476 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 535
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAE 491
+ P + + +L + G D F E ++ PN Y + L G E+A
Sbjct: 536 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 595
Query: 492 EIFNHM 497
++++ M
Sbjct: 596 KLYDEM 601
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 115/287 (40%), Gaps = 19/287 (6%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+FD++ ++G +PS T+ LI A G ++ A + N M Q G P + N+L
Sbjct: 352 LFDEMTDKGLIPSAHTYGALIHGVCKA---GQMEAAQMLVNEM-QGKGIDLNPVIFNTLI 407
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
G+ L+ + L S + I SGL L+ K+ L
Sbjct: 408 DGYCES--GMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNR------KDEAKGLLF 459
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
M + G +++ + KEG+ +A++ + + E N + ++ Y+K G
Sbjct: 460 SMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRG 519
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
++ ++ E++ R V +I C + ++ L E + G L+P+ +
Sbjct: 520 NMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRG---LVPNVV 576
Query: 442 NLTNMYLNLGMHDRLHLAF---SECLEK-CRPNRTIYGIYLESLKNA 484
T M L R AF E E P+ T+Y + SL +A
Sbjct: 577 TYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 623
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 175/411 (42%), Gaps = 27/411 (6%)
Query: 134 ILNAQKKWLRQEDGTYLAV---HCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
+LN K R + Y +V +C + + +TGF++ E M+ D A L D +
Sbjct: 112 LLNQALKRFRPDVFLYTSVIHGYC-KAGDLDTGFKILEEMLAAGCIP-DAAAYFVLIDPL 169
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
K + + ++F+ + G + +TF LI A + G LDEAC +Y MI+ G Y
Sbjct: 170 CKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSN---HGKLDEACELYREMIERG-Y 225
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
+P + +SL AL K G + +A I+ ++ + + Y+ L+ +
Sbjct: 226 EPYLEVQDSLIFAL-CKAGKV-----DEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGR 279
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
+D + + LL + ++ F + + + V ++ ++DA + + +LL S P A
Sbjct: 280 VD-DGLKLLLQMVECDNFPDIQTYNILVAGF-SRANRLDDALELF-KLLSSYGCKPNAA- 335
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSA-SVPAYHKIIELLCKAEETELTESLMKEFV 429
Y I + + + E + A V +Y +I+ L ++ + L ++
Sbjct: 336 -----TYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLK 390
Query: 430 ETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIE 488
G P + +Y + + L G + D L C P RT Y + ++ L A +
Sbjct: 391 TAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLP 450
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
A ++F M + +T + ++ + + +A K+ D+M K E
Sbjct: 451 DACKVFEQMVQKGCVP-DTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE 500
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 130/312 (41%), Gaps = 20/312 (6%)
Query: 192 KERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K RK K ++F ++ + G P+ ++++ +I S +DEA +N MI G +
Sbjct: 32 KARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDK---MDEAYKFFNSMID-NGCE 87
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLE-IQKDIYSGLIWLHSYQDN 310
P +L G K Q + H LL L+ + D++ +H Y
Sbjct: 88 PDVIAFTTLIH-------GFCKAGQPQ---VGHMLLNQALKRFRPDVFLYTSVIHGYCKA 137
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
D + + +EM AG ++ K G V++A + + R+ +S F
Sbjct: 138 GDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTF 197
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
+ +EA + G+ ++ E++REM ER + +I LCKA + + + + V
Sbjct: 198 MTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVA 257
Query: 431 TGMKPLMPSYINLTNMYLNLGMHD---RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNI 487
+ +Y +L + Y LG D +L L EC P+ Y I + A +
Sbjct: 258 KKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDN--FPDIQTYNILVAGFSRANRL 315
Query: 488 EKAEEIFNHMHS 499
+ A E+F + S
Sbjct: 316 DDALELFKLLSS 327
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 130/335 (38%), Gaps = 55/335 (16%)
Query: 203 FDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFR 262
F+D+ VP+ T+ ++I A + L +AC ++ +M+Q G P + +L
Sbjct: 421 FEDMSGSSCVPTRTTYTVVIDGLCKAQM---LPDACKVFEQMVQ-KGCVPDTITYTTLID 476
Query: 263 ALVSKPGGLSKYY-LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID--KERISLL 319
G SK + +A + +LT G E Y ++ D I+ KE I+
Sbjct: 477 -------GFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIA-- 527
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK------------------TWLRLLES 361
+M++ G E G + S+L +G E+A + + + LL S
Sbjct: 528 --QMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFS 585
Query: 362 DNGIPTPAFVYK-----------------MEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
+P V+ ++ ++KIG + EI M + A
Sbjct: 586 TGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFA 645
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
Y+ +++ K E + + V +G+KP ++ L + G DR F E L
Sbjct: 646 YNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEML 705
Query: 465 EK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
EK P Y I ++ L AG + +A F M
Sbjct: 706 EKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEM 740
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/119 (18%), Positives = 54/119 (45%)
Query: 385 KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT 444
K++E+F EM ++ +Y+ +I L ++ + ++ G +P + ++ L
Sbjct: 38 KAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLI 97
Query: 445 NMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
+ + G H+ ++ L++ RP+ +Y + AG+++ +I M + I
Sbjct: 98 HGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCI 156
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 154/397 (38%), Gaps = 52/397 (13%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
T LA++ ++ + E R+ E M + F T+L +GK + +F +++
Sbjct: 270 TILAMY-FKLNKVEAALRLVEEMKGKGCAPTVFTY-TELIKGLGKVGRVDDAYSLFFNML 327
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
G P + + LI A G L++A ++ +M L P +N++ +A+
Sbjct: 328 KDGCKPDVVLINNLINILGRA---GRLEDALKLFGKMDSLQ-CAPNVVTYNTVIKAIFE- 382
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
SK +A F + +G+ Y+ LI + + E+ LL +EM + G
Sbjct: 383 ----SKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRV--EKALLLLEEMDEKG 436
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKS 386
F P P A+ +++ + + +
Sbjct: 437 FP------------------------------------PCPAAYCSLIDSLGRAKRYEAA 460
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNM 446
E+F+E++E G +S Y +I+ L E + G P + +Y L +
Sbjct: 461 NELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSG 520
Query: 447 YLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV 505
+ GM D H E C P+ + I L L G ++A E+F M + I
Sbjct: 521 MIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESE-IMP 579
Query: 506 NTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIES 542
+ S N ILS +G F A K+ M LK +E +S
Sbjct: 580 DAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDS 616
>gi|225446845|ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Vitis vinifera]
Length = 844
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 26/282 (9%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
+ F++++ M +++ R F + L D MGK + ++ ++ G PS +
Sbjct: 336 DAAFKLFQEMKEKN-LRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVS 394
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
LI +++ A G L+ A I++ M + G++P L+ + + +K G L + A
Sbjct: 395 LIESFVKA---GKLETALRIWDEM-KKAGFRPNYGLYTMVVESH-AKSGKL-----ETAM 444
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+F ++ +G YS L+ +HS +D L M AG G ++L
Sbjct: 445 SVFSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAM--KLYNSMTNAGLRPGLSTYTALLT 502
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
+ A + V+ A K L + + A M Y K G +L R M GS+
Sbjct: 503 LLANKKLVDVAAKVLLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFM----GSS 557
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
+ + II +L ES MK + KPL+ +Y+N
Sbjct: 558 GIRTNNFIIR--------QLFESCMKNGLYESAKPLLETYVN 591
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
E+ R+ + G +SV A ++++ L KAE+ E+ K+ ++G K +Y +L ++
Sbjct: 235 EMIRDSGDNNGVSSVIACNQVVRDLAKAEKLEVAFCCFKKVQDSGCKIDTATYNSLITLF 294
Query: 448 LNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
LN G+ + + E +E C + + Y + + SL +G ++ A ++F M
Sbjct: 295 LNKGLPYKAFEVY-ESMEAAGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEM 345
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 91/224 (40%), Gaps = 5/224 (2%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
L+ A F + SG +I Y+ LI L + + + + + M+ AG
Sbjct: 265 LEVAFCCFKKVQDSGCKIDTATYNSLITL--FLNKGLPYKAFEVYESMEAAGCLLDGSTY 322
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
++ AK G ++ A K + + E + F +++ K G S++++ EMQ
Sbjct: 323 ELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQG 382
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
S Y +IE KA + E + E + G +P Y + + G +
Sbjct: 383 FGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLET 442
Query: 456 LHLAFSECLEKCR--PNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
FS+ +EK P + Y LE +G ++ A +++N M
Sbjct: 443 AMSVFSD-MEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSM 485
>gi|224121664|ref|XP_002330622.1| predicted protein [Populus trichocarpa]
gi|222872226|gb|EEF09357.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 107/278 (38%), Gaps = 39/278 (14%)
Query: 269 GGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
G + + +Q+AE + + G+ Y+ LI L+S + DK I L KEM++ G
Sbjct: 53 GCVREKSVQKAEAVMQEMREGGMTTSSFPYNILIILYSQTGDFDK--IPPLMKEMERNGI 110
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN--GIPTPAFVYKMEAYAKIGEFMKS 386
E K L +++ D+ E+ L+L+E + G+ + +AY KIG +
Sbjct: 111 AEDKYTLRNLIAASVAASDISGVERI-LKLMEENPELGLDWKLYAMAADAYLKIGSIETA 169
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNM 446
L + ++++ + A L ++
Sbjct: 170 LTMLEKLEKWMAFRKKKAVFNF----------------------------------LLSL 195
Query: 447 YLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN 506
Y G D L+ ++ T Y ++SL +IE AE+IF S T +
Sbjct: 196 YAKTGNKDELYRIWNLYKPSSESMDTSYCCMIDSLTKLDDIEGAEKIFEEWESQCTTTYD 255
Query: 507 TRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAW 544
R N +L AY + G F KAE + + S W
Sbjct: 256 FRVLNGLLVAYCNRGLFEKAEAAIEKAVQGRTPYASTW 293
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 135/317 (42%), Gaps = 31/317 (9%)
Query: 193 ERKFAKCRDIFDDIINQGRV-PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
E ++ K ++++++ +G P MT+ LI A+ G D A + N M + G Q
Sbjct: 207 EGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKL---GRRDSAIQLLNEM-KDNGMQ 262
Query: 252 PRPSLHN---SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
P ++ +LF L G LS + + ++ ++ T Y+ LI
Sbjct: 263 PTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFT---------YTELIRGLGKA 313
Query: 309 DNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP 368
ID+ EMQ+ G V+ +++ K G ++DA K + + + + IP+
Sbjct: 314 GRIDEAYHFFY--EMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLF-QEMGTLRCIPS- 369
Query: 369 AFVYKMEAYAKIGEFMKSLEI---FREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
Y A ++ E+ F M+E S S Y +I+ CK E L+
Sbjct: 370 VVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLL 429
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA---FSECLEKCRPNRT-IYGIYLESL 481
+E E G P +Y +L + LG R LA F E E C + + +Y + ++ L
Sbjct: 430 EEMDEKGFPPCPAAYCSLID---ALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHL 486
Query: 482 KNAGNIEKAEEIFNHMH 498
AG ++ A +F+ M+
Sbjct: 487 GKAGRLDDAINMFDEMN 503
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 114/281 (40%), Gaps = 19/281 (6%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ + R D T+L +GK + + F ++ +G P + + +I A
Sbjct: 291 MRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKA-- 348
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSL--HNSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
G LD+A ++ M G + PS+ +N++ +AL SK + F +
Sbjct: 349 -GRLDDAMKLFQEM---GTLRCIPSVVTYNTIIKALFE-----SKSRASEVPSWFERMKE 399
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
SG+ YS I + + E+ +L +EM + GF S++ K
Sbjct: 400 SGISPSSFTYS--ILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRY 457
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
+ A + + L E+ + + ++ K G ++ +F EM + + V AY+ +
Sbjct: 458 DLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNAL 517
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
+ L + + S M+ E G P + SY N+ LN
Sbjct: 518 MSGLARTGMLDEALSTMRRMQEHGCIPDINSY----NIILN 554
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 140/344 (40%), Gaps = 59/344 (17%)
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLH--NSLFRALVSKPGGLSKYYLQQAEFIFHNLLT 288
+G + A +++ M G Y +PSL NSL LV + S A ++ +
Sbjct: 9 KGMVKNALHVFDNM---GKYGRKPSLRSCNSLLSNLVKRGESYS------AVLVYDQMRR 59
Query: 289 SGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE------------------- 329
L+I D+++ I +++Y ER +EM++ GFE
Sbjct: 60 --LDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDI 117
Query: 330 EG----------------KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
EG K L +++ K+ VE+AEK LR +E ++G+ + Y
Sbjct: 118 EGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKV-LREMEKEDGVVVDEYAYG 176
Query: 374 --MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET 431
++ Y K+G+ ++ + EM + ++ + +I CK + E L+ +
Sbjct: 177 ALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKL 236
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR----PNRTIYGIYLESLKNAGNI 487
+KP SY L + Y G+ + AF+ C + R P Y L+ L G+
Sbjct: 237 DLKPDSYSYCTLVDGYCRDGLSSK---AFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDY 293
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
+ A ++ H+ + + N +L GDF +A ++D
Sbjct: 294 KDALRLW-HLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWD 336
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 78/162 (48%), Gaps = 2/162 (1%)
Query: 291 LEIQKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
L+++ D YS + Y +D + + ++ +M + G E ++L+ + GD +
Sbjct: 236 LDLKPDSYSYCTLVDGYCRDGLSSKAFNVCD-QMLRKGIEPTVVTYNTLLKGLCRFGDYK 294
Query: 350 DAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
DA + W +L+ + ++ K+G+F ++L ++ ++ R + S+ A++ +I
Sbjct: 295 DALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMI 354
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
LCK E + + K E G KP +Y L++ Y +G
Sbjct: 355 NGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVG 396
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 137/324 (42%), Gaps = 23/324 (7%)
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
F+ LI +Y A G E+ ++N M +G P NSL L L +
Sbjct: 159 FNSLIRSYGKA---GLFQESVQVFNSMKSVG-VSPSVVTFNSLLLIL------LKRGRTN 208
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
A+ +F +L++ + D Y+ I + + N + KEM + + +
Sbjct: 209 MAQSVFDEMLST-YGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNT 267
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQE 395
++ + G V A +++ + Y + Y E ++L +F EM
Sbjct: 268 LVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVS 327
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG-MKPLMPSYINLTNMYLNLG-MH 453
+ + Y+ +I+ LC+ ++ + + + + + G P + L N + N G ++
Sbjct: 328 KGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLN 387
Query: 454 DRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
D L + + RP+ Y + + +L GN E+AE++F+ + S++ I + C +
Sbjct: 388 DALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDEL-SEKEILLRDDGCTPL 446
Query: 514 LSAYLS-------SGDFVKAEKIY 530
++AY S +G KAE+++
Sbjct: 447 VAAYKSMFEFLCRNGKTAKAERVF 470
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 130/340 (38%), Gaps = 48/340 (14%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
M + K A R++FD+++ +G P+ +TF+ L+ A L+ A ++ M + G
Sbjct: 252 MIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKA---SDLNNANALRGLMAK-AG 307
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
P + + + L K G +Q A +F + GL + + LI H +
Sbjct: 308 IAPDVYTYGAFIQGLC-KTG-----RIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEG 361
Query: 310 NI---------------------------------DKERISLLKKEMQQAGFEEGKEVLL 336
++ D + + + +EM++ G + K
Sbjct: 362 DVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYT 421
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQ 394
+++ C KEG+++ A + + SD G+ Y + +K G + + I EM
Sbjct: 422 TLIDGCCKEGELDTAMEMKQEM--SDEGVALDDVTYTALISGLSKAGRSVDAERILCEMM 479
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
E Y +I+ CK + + +KE G P + +Y + N + +LG
Sbjct: 480 EAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMK 539
Query: 455 RLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEI 493
+ + L PN Y I L+ G + EE+
Sbjct: 540 NADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEEL 579
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 113/288 (39%), Gaps = 11/288 (3%)
Query: 236 EACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQK 295
EA + Y ++ G P N L R ++ + G L+ A +F +L G +Q
Sbjct: 225 EAYAFYLHLLD-AGVPPEARQFNMLMRDMI-RSGKLA-----SARNVFDEMLRRG--VQP 275
Query: 296 DIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
+ + + D + L+ M +AG + ++ K G ++DA + +
Sbjct: 276 TVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMF 335
Query: 356 LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
+ E T ++A+ K G+ LE+ EM R A + AY+ ++ C+
Sbjct: 336 EEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRV 395
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTIY 474
+ + +++E + G+KP +Y L + G D + + E + Y
Sbjct: 396 RDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTY 455
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGD 522
+ L AG AE I M NT + +++ A+ +GD
Sbjct: 456 TALISGLSKAGRSVDAERILCEMMEAGLQPDNT-TYTMVIDAFCKNGD 502
>gi|413946102|gb|AFW78751.1| hypothetical protein ZEAMMB73_641405 [Zea mays]
Length = 666
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 143/345 (41%), Gaps = 15/345 (4%)
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL 271
VP T + ++V L A G L +A + + M+ G P P +++ L V G
Sbjct: 171 VPPSPTAYRVVVECLVAD-HGRLADAVKLKDEMLTSGFVGPDPKVYSLLMAGFVGAGDGA 229
Query: 272 SKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEM--QQAGFE 329
L Q G I I G + + +Y E++ KE+ ++
Sbjct: 230 KALELYQE----LKDKVGGEPILDGIVYGTL-MKAYFLMGTGEKVMECYKEVLCVESAVR 284
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN-----GIPTPAFVYKMEAYAKIGEFM 384
G E V+ + G +EDA K + R+LE + + +F ++ Y G F
Sbjct: 285 FGAESYNEVVDALGQNGRLEDALKLFDRMLEEHDPPLRIAVDLRSFRVMVDTYCAAGRFE 344
Query: 385 KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT 444
++ +FR M E V +Y+ +I L + + E L E E+G+ +Y+ LT
Sbjct: 345 DAVAVFRRMGEWKLVPDVASYNNLIRHLQINQLIDKAEVLYNEMCESGVGADKETYLLLT 404
Query: 445 NMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
++ D F + E + +P+ T Y ++ L ++KA+E FN M ++ +
Sbjct: 405 EACFSVDRIDDGISYFDKMDELELKPDATAYHKLIDGLVGFSMVDKAQEYFNQM-KEKGV 463
Query: 504 GVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL 548
+ S +L AY+++ A + + L + + S M +L
Sbjct: 464 NPSISSYETLLKAYIAADRLDDAVNVAKGILLNEKVLFSYGMREL 508
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 125/300 (41%), Gaps = 18/300 (6%)
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
A ++ M + P +N++ R+L + L +A ++ SG
Sbjct: 136 ALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRAD------LARALRYLSLMVRSGWRPDAY 189
Query: 297 IYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL 356
++ LI + + +D R L +M GF + +++ + G +++A + +
Sbjct: 190 TFNSLIVGYCRTNQVDVARD--LFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFG 247
Query: 357 RLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAE 416
+ + D + A + K A+ GE + L + R M+E S AY +++ C+
Sbjct: 248 EMDQPD--MHMYAALVKGLCNAERGE--EGLLMLRRMKELGWRPSTRAYAAVVDFRCRER 303
Query: 417 ETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYG 475
+ + E +++E E G+ P + + + N Y G M D L + L C+PN Y
Sbjct: 304 KAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYN 363
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC--NIILSAYLSSGDFVKAEKIYDLM 533
++ N G + KA + N M + GVN + N+++ G A ++ LM
Sbjct: 364 ALVQGFCNEGKVHKAMTLLNKMRA---CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 420
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 176/447 (39%), Gaps = 62/447 (13%)
Query: 98 VVEVIELEEL----PEQWR-RAKLAWLCKELPSHKGGTLVRILNAQKKWLRQEDGTY-LA 151
+ V+EL +L P W A + C E HK TL+ + A + + TY L
Sbjct: 343 ALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACG--VNPDAVTYNLL 400
Query: 152 VHCMRIREN-ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQG 210
+ I + E+ FR+ +M+ D L + + K+ + + +FD + +G
Sbjct: 401 IRGQCIDGHIESAFRLLR-LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 459
Query: 211 RVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPG- 269
P+ +TF+ LI + G D A +M+ G P ++S L G
Sbjct: 460 IKPNAVTFNSLINGLCKS---GKADIAWKFLEKMVS-AGCTPDTYTYSSFIEHLCKMKGS 515
Query: 270 --GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER----ISLLKKEM 323
GLS FI G +QKD+ + + KER ++ EM
Sbjct: 516 QEGLS--------FI-------GEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 560
Query: 324 QQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEF 383
+G + +R EG + +AE + + ++ + T A+ M+ +A IG+
Sbjct: 561 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 620
Query: 384 MKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS---- 439
++ I ++M ASVP LL L E ++ PL P+
Sbjct: 621 DHAVSILKQMTS---VASVPNQFTYFILLRHLVRMRLVEDVL---------PLTPAGVWK 668
Query: 440 YINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
I LT+++ G+ D + +E L PN Y LE G E+A + + M
Sbjct: 669 AIELTDVF---GLFDVMKK--NEFL----PNSGTYSSILEGFSEDGRTEEATSLVSLMKE 719
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKA 526
D +I +N +++ + S ++ A
Sbjct: 720 D-SISLNEDIYTALVTCFCKSKRYLDA 745
>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 14/266 (5%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D+ +G +P+ T++IL Y + G LD A ++N M + G +++L
Sbjct: 391 VLKDMEIKGCLPNVDTYNILASGYCDS---GMLDSAIDLFNDM-KTDGINWNFMTYDTLI 446
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
R L S GG + + E + + +G I Y+ +I+ Y+ N +E + L K
Sbjct: 447 RGLCS--GGRMEDGFKILELMEESRGGAGGRISP--YNSIIY-GLYKKNQFEEALEFLTK 501
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYKMEAYAKI 380
+ F + L +L C EG + DA++ + ++++ + G+P+ +V + + +
Sbjct: 502 --MEKLFPRAVDRSLRILGFC-NEGSIGDAKRVYDQMIK-EGGVPSVLVYVCLIHGFCQD 557
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G ++ E+ EM + + P ++ +I C + LM++ V G P M SY
Sbjct: 558 GNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSY 617
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEK 466
+ + N G + F + +EK
Sbjct: 618 SPMVDALCNKGDFQKAVRLFLQMVEK 643
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 143/368 (38%), Gaps = 28/368 (7%)
Query: 169 WMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQ-GRVPSEMTFHILIVAYLS 227
++ Q YR AL KL + R+F +++ D++ + G P E F ++
Sbjct: 123 FIHNQSTYR---ALIHKLCSF----RRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGR 175
Query: 228 APVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLL 287
A + + + + + G P + NS+ LV + L++ EF ++
Sbjct: 176 ARMVRQMIKVLDLITKF----GENPSLKIFNSILDVLVKEDIDLAR------EFYRKKMM 225
Query: 288 TSGLEIQKDIYS-GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEG 346
+G + D Y+ G++ N + LL+ M+ G + +++ K G
Sbjct: 226 MNG--VSGDDYTFGILMKGLCLTNRIGDAFKLLQV-MKSRGKTPNTVIYNTMIHALCKNG 282
Query: 347 DVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
V A ++E + F + AY + +++L + + V
Sbjct: 283 KVGRARSLMNEMVEPSD----VTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTAT 338
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LE 465
K++ +LCKA +++ G + +Y L + LG H + ++
Sbjct: 339 KVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIK 398
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
C PN Y I ++G ++ A ++FN M +D I N + + ++ S G
Sbjct: 399 GCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTD-GINWNFMTYDTLIRGLCSGGRMED 457
Query: 526 AEKIYDLM 533
KI +LM
Sbjct: 458 GFKILELM 465
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 146/353 (41%), Gaps = 21/353 (5%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + K + + D + G P+ +T +I+I A LDEACSI+
Sbjct: 417 LIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQR---LDEACSIF---- 469
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
LG + + F +L+ G K + A ++ +L SG +Y+ LI
Sbjct: 470 -LGLDHKVCTPDSVTFCSLIDGLGRHGK--VNDAYMLYEKMLDSGQTPNAVVYTSLI--R 524
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
++ KE + KEM G +L + + K G++E + +
Sbjct: 525 NFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTP 584
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
++ + K G + ++F EM+E+ AY+ +I+ CK+ + L+
Sbjct: 585 DVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLL 644
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRP-NRTIYGIYLESLKNA 484
+E G++P + +Y ++ + + D ++ F E K N +Y ++
Sbjct: 645 EEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKV 704
Query: 485 GNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD-LMCLK 536
G I++A I + + + NT + N +L A VKAE+I + L+C +
Sbjct: 705 GRIDEAYLILEELMQ-KGLTPNTYTWNCLLDA------LVKAEEIDEALVCFQ 750
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 15/222 (6%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEA 376
L ++MQ+ G+E + +++ V A+EG V DA + L ++S N +Y ++
Sbjct: 224 LLRQMQEIGYEVTVHLFTTLICVFAREGRV-DAALSLLDEMKS-NSFNADLVLYNVCIDC 281
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
+ K+G+ + + F E++ + + +I +LCKAE + L +E P
Sbjct: 282 FGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPC 341
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLEK-----CRPNRTIYGIYLESLKNAGNIEKAE 491
+ +Y M + G + + A+S LE+ C P+ Y L L G +E+A
Sbjct: 342 VYAY---NTMIMGYGSVGKFNEAYS-LLERQKRKGCIPSVIAYNCILTCLGRKGKVEEAL 397
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
I M D N S NI++ +G+ A K+ D M
Sbjct: 398 RILEAMKMDA--APNLTSYNILIDMLCKAGELEAALKVQDSM 437
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 66/355 (18%), Positives = 144/355 (40%), Gaps = 21/355 (5%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M+ + + D L D GK K F ++ +QG VP ++TF +I A
Sbjct: 263 MKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAER 322
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+DEA ++ +L + P ++ + ++ G + K+ +A + G
Sbjct: 323 ---VDEAVELFE---ELDSNKSVPCVYA--YNTMIMGYGSVGKF--NEAYSLLERQKRKG 372
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
Y+ ++ + +++ L +M A +L+ +L K G++E
Sbjct: 373 CIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDML---CKAGELEA 429
Query: 351 AEKTWLRLLESD---NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
A K + E+ N I + ++ ++ E + IF + ++ + +
Sbjct: 430 ALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDE---ACSIFLGLDHKVCTPDSVTFCS 486
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK- 466
+I+ L + + L ++ +++G P Y +L + G + H + E + +
Sbjct: 487 LIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRG 546
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
C P+ + Y++ + AG IEK +F + + Q + + RS +I++ + G
Sbjct: 547 CSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKA-QGLTPDVRSYSILIHGLVKGG 600
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 72/361 (19%), Positives = 143/361 (39%), Gaps = 23/361 (6%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E G ++Y+ MM + D L D + K + K R +F++I QG P ++ I
Sbjct: 533 EDGHKIYKEMMHRGCSP-DLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSI 591
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
LI + G + ++ M + G + + +N + K G ++K Y
Sbjct: 592 LIHGLVKG---GFSKDTYKLFYEMKEQGLHLDTRA-YNIVIDGF-CKSGKVNKAYQ---- 642
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ + T GL+ Y +I + D +D+ +L +E + + V S++
Sbjct: 643 -LLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAY--MLFEEAKSKAVDLNVVVYSSLID 699
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
K G +++A L++ T + ++A K E ++L F+ M+
Sbjct: 700 GFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPP 759
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
+ Y ++ LCK + +E + G+KP +Y + + +G L
Sbjct: 760 NEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGN----VLEA 815
Query: 461 SECLEKCR-----PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILS 515
+ E+ + P+ Y +E L NA A +F + + +++C ++L
Sbjct: 816 KDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRL-KGCRIYSKTCVVLLD 874
Query: 516 A 516
A
Sbjct: 875 A 875
>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 104/234 (44%), Gaps = 6/234 (2%)
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM 374
R ++ KEM G+ E V+ K+ +++A + R+L+S F +
Sbjct: 221 RFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMV 280
Query: 375 EAYAKIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTESLMKEFVET 431
+ K+G+ +L++ R+M+ + P Y+ +I+ CK + E L E ++
Sbjct: 281 DGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKI 340
Query: 432 GMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKA 490
++P + +Y + Y G + E +E+ PN +Y + L G+++ A
Sbjct: 341 DIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGA 400
Query: 491 EEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAW 544
+F M SD+ I ++ +C+I+ +G A K + + L+ IE A+
Sbjct: 401 SLVFTDM-SDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQV-LENNLIEDAF 452
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 152/356 (42%), Gaps = 18/356 (5%)
Query: 181 ALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSI 240
A+ L D K R+ A+ +++++ G P +TF+IL+ + G ++++ +
Sbjct: 353 AIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYK---YGRIEDSDRL 409
Query: 241 YNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSG 300
+I G + L +SL+ +VS + L +A + LL GL + ++
Sbjct: 410 LKDLIVSGLF-----LDSSLYDVMVSSLCWAGR--LDEAMKLLQELLEKGLTLSVVAFNS 462
Query: 301 LIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
LI +S DK + + M + GF S+L ++G +++A R+LE
Sbjct: 463 LIGAYSRAGLEDKAFEAY--RIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLE 520
Query: 361 SDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
I A+ ++ Y K+ + +++EM+ER A+ +I+ L KA E
Sbjct: 521 KGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEE 580
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLE 479
+ E G P +Y +L + G + + L L + + + I ++
Sbjct: 581 AYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIID 640
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G ++ A E F M Q IG+ + + NI++ Y + D V A +I + M
Sbjct: 641 GFCRRGQMKFAIETFLDM---QRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKM 693
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 113/274 (41%), Gaps = 47/274 (17%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ +++ +G S + F+ LI AY A ++ D+A Y M++ G + P S NSL
Sbjct: 444 LLQELLEKGLTLSVVAFNSLIGAYSRAGLE---DKAFEAYRIMVRCG-FTPSSSTCNSLL 499
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
L K +LQ+A + + +L G I K Y+ + L Y + E L K
Sbjct: 500 MGLCRKG------WLQEARILLYRMLEKGFPINKVAYT--VLLDGYFKMNNLEGAQFLWK 551
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL------------------------- 356
EM++ G +++ +K G+VE+A + +L
Sbjct: 552 EMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCG 611
Query: 357 RLLES--------DNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
R+ E+ G+ + F + + + + + G+ ++E F +MQ + ++
Sbjct: 612 RVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFN 671
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
+I CKA + ++ + G+ P + +Y
Sbjct: 672 ILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTY 705
>gi|297839237|ref|XP_002887500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333341|gb|EFH63759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 989
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 2/161 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
++AY K K+L IF+ M+ + Y+ +I++L + + + ++ E +++G
Sbjct: 519 IKAYGKAKLHEKALSIFKGMKNQGTWPDECTYNSLIQMLAGVDLVDDAQRILAEMLDSGC 578
Query: 434 KPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
KP +Y L Y+ LG + D + L + +PN +YG + +G +E+A +
Sbjct: 579 KPGCKTYAALIASYVRLGLLSDAVDLYEAMKKTGVKPNEVVYGSLINGFAESGMVEEAIQ 638
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
F M + + N ++ AY G +A ++YD M
Sbjct: 639 YFKLME-EHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM 678
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 116/245 (47%), Gaps = 25/245 (10%)
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
+ ++++I AY A + ++A SI+ M G + P +NSL + L G+
Sbjct: 513 LEYNVMIKAYGKAKLH---EKALSIFKGMKNQGTW-PDECTYNSLIQML----AGVD--L 562
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIW----LHSYQDNIDKERISLLKKEMQQAGFEEG 331
+ A+ I +L SG + Y+ LI L D +D L + M++ G +
Sbjct: 563 VDDAQRILAEMLDSGCKPGCKTYAALIASYVRLGLLSDAVD------LYEAMKKTGVKPN 616
Query: 332 KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEI 389
+ V S++ A+ G VE+A + + +L+E ++G+ + V ++AY+K+G ++ +
Sbjct: 617 EVVYGSLINGFAESGMVEEAIQ-YFKLME-EHGVQSNHIVLTSLIKAYSKVGCLEEARRV 674
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
+ +M++ G V A + ++ L ES+ + E G ++ S+ + +Y
Sbjct: 675 YDKMKDSGGGPDVAASNSMLSLCADLGIVSEAESIFNDLREKGTCDVI-SFATMMYLYKG 733
Query: 450 LGMHD 454
+GM D
Sbjct: 734 MGMLD 738
>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
Length = 648
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
E A + RLL + G ++ ++ ++K GE K+ E+F +M E+ S V Y+ +
Sbjct: 46 ELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSL 105
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE------ 462
I+ LCK +E +E ++++ V+ G++P +Y +L Y GM F E
Sbjct: 106 IDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGL 165
Query: 463 --CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSS 520
C+ C ++ +L I++A++IF+ M + N S + +L Y +
Sbjct: 166 IPCVVNCNS-------FIHALCRHNRIKEAKDIFDSM-VLKGPKPNIISYSTLLHGYAAE 217
Query: 521 GDFVKAEKIYDLMCLK 536
G F + +LM K
Sbjct: 218 GCFANMNSLVNLMVSK 233
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 8/195 (4%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
+KEG+V+ A + + +++E + ++ K E +KS + +M + +
Sbjct: 75 SKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNN 134
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF-- 460
Y+ +I A + + + KE +G L+P +N + L H+R+ A
Sbjct: 135 KTYNSLIYGYSTAGMWKESVRVFKEMSSSG---LIPCVVNCNSFIHALCRHNRIKEAKDI 191
Query: 461 --SECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
S L+ +PN Y L G + N M S + I N R NI+++AY
Sbjct: 192 FDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVS-KGIVPNHRFFNILINAYA 250
Query: 519 SSGDFVKAEKIYDLM 533
G KA I++ M
Sbjct: 251 RCGMMDKAMLIFEDM 265
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 106/270 (39%), Gaps = 37/270 (13%)
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
E FA + + ++++G VP+ F+ILI AY G +D+A I+ M Q G
Sbjct: 215 AAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARC---GMMDKAMLIFEDM-QNKGM 270
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
P F ++S + + L A F++++ G+ + +Y LI
Sbjct: 271 IP----DTVTFATVISSLCRIGR--LDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGE 324
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
+ K + L+ + M + G + S++ KEG V + + ++++ F
Sbjct: 325 LVKAK-ELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTF 383
Query: 371 VYKMEAYAKIGEFMKSL--------------------------EIFREMQERLGSASVPA 404
ME Y +G ++L ++F EM E + S+
Sbjct: 384 NSLMEGYCLVGNMEEALHYLMLWHQLALNRIVTYMARRTTAAKKMFHEMIESGTTVSIQT 443
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMK 434
Y ++ LC+ T+ L+++ +K
Sbjct: 444 YGVVLGGLCRNNCTDEANMLLEKLFAMNVK 473
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 149/359 (41%), Gaps = 19/359 (5%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M + Y D L TKL R K + + I+ + P ++ LI +
Sbjct: 111 MVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVME-ILEKFGQPDVFAYNALINGFCK--- 166
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+D+A + +RM + + P +N + +L S+ L A + LL+
Sbjct: 167 MNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGK------LDLALKVLDQLLSDN 219
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ Y+ LI + +D E + LL EM G + +++R KEG V+
Sbjct: 220 CQPTVITYTILIEATMLEGGVD-EALKLLD-EMLSRGLKPDMFTYNTIIRGMCKEGMVDR 277
Query: 351 AEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
A + +R LE P ++ + A G++ + ++ +M +V Y +I
Sbjct: 278 AFE-MIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 336
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL--EKC 467
LC+ + E +L+K E G+ P SY L + G D + + F E + + C
Sbjct: 337 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD-VAIEFLETMISDGC 395
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
P+ Y L +L G ++A EIF + + N+ S N + SA SSGD ++A
Sbjct: 396 LPDIVNYNTVLATLCKNGKADQALEIFGKL-GEVGCSPNSSSYNTMFSALWSSGDKIRA 453
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 139/333 (41%), Gaps = 24/333 (7%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D +++ P+ +T+ ILI A + ++G +DEA + + M+ G +P +N++
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATM---LEGGVDEALKLLDEMLS-RGLKPDMFTYNTII 266
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
R + K G + + + E I NL G E D+ S I L + + E L
Sbjct: 267 RGMC-KEGMVDRAF----EMI-RNLELKGCE--PDVISYNILLRALLNQGKWEEGEKLMT 318
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAK 379
+M + ++ ++G +E+A L+L++ + G+ A+ Y + A+ +
Sbjct: 319 KMFSEKCDPNVVTYSILITTLCRDGKIEEA-MNLLKLMK-EKGLTPDAYSYDPLIAAFCR 376
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
G ++E M + Y+ ++ LCK + + + + E G P S
Sbjct: 377 EGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 436
Query: 440 YINLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
Y + + + G R LH+ P+ Y + L G ++KA E+ M
Sbjct: 437 YNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMR 496
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
S + + + NI+L F KA +I D
Sbjct: 497 SCE-FHPSVVTYNIVLLG------FCKAHRIED 522
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 2/192 (1%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
K ++DA + R+ D T + + + G+ +L++ ++ +V
Sbjct: 165 CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTV 224
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR-LHLAFS 461
Y +IE + L+ E + G+KP M +Y + GM DR + +
Sbjct: 225 ITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRN 284
Query: 462 ECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
L+ C P+ Y I L +L N G E+ E++ M S++ N + +I+++ G
Sbjct: 285 LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC-DPNVVTYSILITTLCRDG 343
Query: 522 DFVKAEKIYDLM 533
+A + LM
Sbjct: 344 KIEEAMNLLKLM 355
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 20/281 (7%)
Query: 134 ILNAQKKW-LRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
+ +A KW LR +Y L +R+ + + GFR+ M+ + D + L + +
Sbjct: 164 VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG-VQPDVYTYSVLINGL 222
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
KE K ++FD+++ +G VP+ +TF LI + G +D A IY +M+
Sbjct: 223 CKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK---NGRVDLAMEIYKQMLS-QSL 278
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
P +N+L L K L+QA + + GL+ K Y+ LI + +
Sbjct: 279 SPDLITYNTLIYGLCKKGD------LKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGD 332
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
+D +K M Q + +++ +EG DAEK +L G+ A
Sbjct: 333 LDSAFEH--RKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSV--GLKPDAR 388
Query: 371 VYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
Y M + K G+ K ++ +EMQ SV Y+ ++
Sbjct: 389 TYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 18/220 (8%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD---NGIPTPAFVYKME 375
LK M +G + ++ KE ++DA + + +L NG+ F ++
Sbjct: 199 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV---TFTTLID 255
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ K G ++EI+++M + S + Y+ +I LCK + + L+ E G+KP
Sbjct: 256 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKP 315
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSE----CLEKCRPNRTIYGIYLESLKNAGNIEKAE 491
+Y L + G D AF E R + Y + L G AE
Sbjct: 316 DKITYTTLIDGCCKEGDLDS---AFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAE 372
Query: 492 EIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKI 529
++ M S +G+ + R+ +I++ + GD K K+
Sbjct: 373 KMLREMLS---VGLKPDARTYTMIINEFCKKGDVWKGSKL 409
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 66/155 (42%), Gaps = 1/155 (0%)
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP 403
+ G + DA + + E +P +E K+ F + E+ E AS+
Sbjct: 84 ESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLY 143
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSE 462
++ ++ CK + L +S+ + G++P + SY L N Y+ LG + + L +
Sbjct: 144 FFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 203
Query: 463 CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+P+ Y + + L ++ A E+F+ M
Sbjct: 204 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEM 238
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 140/340 (41%), Gaps = 18/340 (5%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
V + +Q+ Y D T L + KE + + D++ N+G P +T+++LI
Sbjct: 235 AMEVLDRQLQKECYP-DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLI 293
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
+G LDEA N M G QP HN + R++ S + AE +
Sbjct: 294 NGICK---EGRLDEAIKFLNNMPSYG-CQPNVITHNIILRSMCSTGRWM------DAEKL 343
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
++L G ++ LI Q + + I +L+K M G +L
Sbjct: 344 LSDMLRKGCSPSVVTFNILINFLCRQGLLGRA-IDILEK-MPMHGCTPNSLSYNPLLHGF 401
Query: 343 AKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSAS 401
KE ++ A + +L ++ S P + + A K G+ ++EI ++ + S
Sbjct: 402 CKEKKMDRAIE-YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV 460
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
+ Y+ +I+ L K +TE L+ E G+KP + +Y +L + G D + F
Sbjct: 461 LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE-AIKFF 519
Query: 462 ECLE--KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
LE RPN Y + L + ++A + +M S
Sbjct: 520 HDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMIS 559
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 146/381 (38%), Gaps = 59/381 (15%)
Query: 155 MRIRENETGFRVYEWMMQQHWYRFDFA---LATKLADYMGKERKFAKCRDIFDDIINQGR 211
+R E E GF+ E M+ YR D T L + K K + + + G
Sbjct: 125 VRNGELEDGFKFLESMV----YRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL 271
VP +T+++LI Y + G +D A + +RM P +N++ R L
Sbjct: 181 VPDVITYNVLISGYCKS---GEIDNALQVLDRM----NVAPDVVTYNTILRTLCDSG--- 230
Query: 272 SKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE----RISLLKKEMQQAG 327
L+QA + ++QK+ Y +I + KE + L EM+ G
Sbjct: 231 ---KLKQAMEVLDR------QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKG 281
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT----PAFVYK---MEAYAKI 380
+ ++ KEG +++A K N +P+ P + + +
Sbjct: 282 SKPDVVTYNVLINGICKEGRLDEAIKFL-------NNMPSYGCQPNVITHNIILRSMCST 334
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G +M + ++ +M + S SV ++ +I LC+ ++++ G P SY
Sbjct: 335 GRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSY 394
Query: 441 INLTNMYLNLGMHDR----LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
L + + DR L + S C P+ Y L +L G ++ A EI N
Sbjct: 395 NPLLHGFCKEKKMDRAIEYLDIMVS---RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 451
Query: 497 MHSDQTIGVNTRSCNIILSAY 517
+ S + C+ +L Y
Sbjct: 452 LSS--------KGCSPVLITY 464
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 86/200 (43%), Gaps = 9/200 (4%)
Query: 337 SVLRVCAKEGDVEDAEKTW-LRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
S++R + G + A TW + +LE +P + + Y K GE +L++ M
Sbjct: 154 SLIRGFCRIGKTKKA--TWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN 211
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN-LGMH 453
+ V Y+ I+ LC + + + ++ ++ P + +Y L G+
Sbjct: 212 V---APDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVG 268
Query: 454 DRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
+ L + +P+ Y + + + G +++A + N+M S N + NII
Sbjct: 269 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS-YGCQPNVITHNII 327
Query: 514 LSAYLSSGDFVKAEKIYDLM 533
L + S+G ++ AEK+ M
Sbjct: 328 LRSMCSTGRWMDAEKLLSDM 347
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 140/345 (40%), Gaps = 19/345 (5%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
+ ER+ + + + +G SE F +I +Y A G ++A + RM Q
Sbjct: 86 LASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRA---GSSEQALKTFYRM-QDFR 141
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
+P ++N + AL L + Q I+ N+ G+E Y+ L+ +
Sbjct: 142 VKPTVKIYNHILDAL------LDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNN 195
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
+D L+ EM G + + +++ K G V++A + + S P
Sbjct: 196 RVDGAHKLLV--EMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPS-----VPV 248
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
+ + K F ++ ++ EM + +V +Y II L A EL+ +++ +
Sbjct: 249 YNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMF 308
Query: 430 ETGMKPLMPSYINLT-NMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIE 488
G P + ++ +L +L G H+ L E PN Y + L + ++
Sbjct: 309 ARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLG 368
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A +FN M + N R+ + ++ Y +GD A ++++ M
Sbjct: 369 DAVSVFNQMEINGCCP-NVRTYSALIDGYAKAGDLDGASEVWNWM 412
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 69/401 (17%), Positives = 158/401 (39%), Gaps = 43/401 (10%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
R +E + + + MQ + + + D + E +F I+ ++ G P+
Sbjct: 123 RAGSSEQALKTF-YRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNV 181
Query: 216 MTFHILIVAY-------------LSAPVQGCLDEACS---IYNRMIQLG----------G 249
T++IL+ A + +GC + S + + + +LG
Sbjct: 182 FTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMS 241
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
+ P ++N+L G +Y ++A + ++ G++ Y+ +I S
Sbjct: 242 FTPSVPVYNALIN------GVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAG 295
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD---NGIP 366
N++ L K M G S+++ +G +A W R++ N +
Sbjct: 296 NVELSLAVLAK--MFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVA 353
Query: 367 TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMK 426
A ++ + + +G+ ++ +F +M+ +V Y +I+ KA + + +
Sbjct: 354 YNALMHGLCSKRSLGD---AVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWN 410
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAG 485
+ G P + +Y + ++ M ++ + +E C PN + +++ L +G
Sbjct: 411 WMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSG 470
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
++ A ++F+ M + NT + N +L + L F +A
Sbjct: 471 RVDWAIKVFDQMGNSGCFP-NTTTYNELLDSLLKDRRFGEA 510
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 157/352 (44%), Gaps = 32/352 (9%)
Query: 219 HILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH--NSLFRALVSKPGGLSKYYL 276
+ LI AY + G + A ++++ MI+ G P P++ N + RAL+ G L + Y+
Sbjct: 628 NALIHAYAES---GLYEHARAVFDIMIEKG---PLPTIDSVNGMMRALIID-GRLDELYV 680
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
I L G +I K + ++ L ++ D + + M++AG+ +
Sbjct: 681 -----IVQELQDMGFKISKS--TVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYR 733
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK---MEAYAKIGEFMKSLEIFREM 393
S++ + + D E L ++E + P + Y G F K++E++ +
Sbjct: 734 SMISLLCRNKRYRDVE---LMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSI 790
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
E + Y+ +I + + E +L+ E + G+ P + SY +L +
Sbjct: 791 LEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLW 850
Query: 454 DRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNI 512
++ F E K R NR++Y + ++ ++A N KAE++ M D I + +I
Sbjct: 851 EQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLASMKED-GIEPTIATMHI 909
Query: 513 ILSAYLSSGDFVKAEKIYDLMCLKKYEIES--------AWMEKLDYVLSLNR 556
++++Y ++G +AEK+ + + E+ + A+++ DY L + +
Sbjct: 910 LMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTVFNAYLKNGDYNLGITK 961
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 91/216 (42%), Gaps = 8/216 (3%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
E++Q G +++ C++ +++DA + ++ S+ + + + + G
Sbjct: 125 EVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCG 184
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ + +FRE+ E+ Y+ ++ K + + E + +E V G K +Y
Sbjct: 185 KAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYN 244
Query: 442 NLTNMYLNLGMHDRLHLAFSECLE----KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ +MY +G RL LA E C P+ Y + ++SL I A ++ M
Sbjct: 245 TMIHMYGKMG---RLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEM 301
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+D + + + ++ AY G +A + + M
Sbjct: 302 -ADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHM 336
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 106/247 (42%), Gaps = 14/247 (5%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
+ +++ C R + V E M++ + D + L F K +++ I+
Sbjct: 734 SMISLLCRNKRYRDVELMVVE--MERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSIL 791
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
G P+E T++ LIV Y S ++ +E ++ N M + G P+ + SL A
Sbjct: 792 EAGLEPNEDTYNTLIVMY-SRNLRP--EEGFTLLNEMGK-KGLTPKLESYKSLLAA---- 843
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
G +K + +QAE +F + + G + + +Y L+ + Y+D + + L M++ G
Sbjct: 844 -SGKAKLW-EQAEQLFEEIRSKGYRLNRSLYHMLMKI--YRDACNHSKAEQLLASMKEDG 899
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSL 387
E + ++ G ++AEK L S + T + AY K G++ +
Sbjct: 900 IEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTVFNAYLKNGDYNLGI 959
Query: 388 EIFREMQ 394
EM+
Sbjct: 960 TKLLEMK 966
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 83/410 (20%), Positives = 153/410 (37%), Gaps = 59/410 (14%)
Query: 128 GGTLVRILNAQKKWLRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATK 185
G +L ++ LR + TY L C + + V+E MM R D
Sbjct: 117 GSAFDLLLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASEC-RPDLWTYNA 175
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACS------ 239
+ G+ K +F +++ +G P +T++ L+ A+ ++ C
Sbjct: 176 MVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAG 235
Query: 240 ------IYNRMIQLGGYQPRPSLHNSLF---RALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
YN MI + G R L L+ RAL P ++
Sbjct: 236 FKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVT------------------ 277
Query: 291 LEIQKDIYSGLIWLHSYQDNIDK-ERISLLKK---EMQQAGFEEGKEVLLSVLRVCAKEG 346
Y+ LI D++ K +RIS K EM AG + +++ AK G
Sbjct: 278 -------YTVLI------DSLGKMDRISDAGKVLEEMADAGLKPTLVTFSALICAYAKGG 324
Query: 347 DVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
E+A +T+ ++ S A++ ++ A+ G+ K + +++ M Y
Sbjct: 325 RREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALYQTMMNDGYRPDNALYQ 384
Query: 407 KIIELLCKAEETELTESLMKEF-VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE 465
++ L K E + E+++++ V M P + S I + ++ G L CL+
Sbjct: 385 VMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVSSILIKAECISQGA----KLLKKACLQ 440
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS-CNIIL 514
P+ L++ + G E+ + + N S C+I+L
Sbjct: 441 GHEPDSKSLLSILDAYETTGKHEEGLSLLQFIREHVPSSCNLISECSIML 490
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 109/280 (38%), Gaps = 13/280 (4%)
Query: 196 FAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPS 255
F + +F D+ G PS + +I AY G + A + + +Q G
Sbjct: 535 FPEASQVFSDMQFIGIEPSRKIYESMISAYCKL---GFPETAHQLMDEAVQSG------- 584
Query: 256 LHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKER 315
+ ++ + V+ K L Q F L I + I++ LI H+Y ++ E
Sbjct: 585 ISLNILSSRVTMIEAYGKIKLWQHAENFVKGLKQEPSIDRRIWNALI--HAYAESGLYEH 642
Query: 316 ISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKME 375
+ M + G + + ++R +G +++ L + I + ++
Sbjct: 643 ARAVFDIMIEKGPLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLD 702
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
A+ K G+ + ++I+ M+E ++ Y +I LLC+ + E ++ E G +P
Sbjct: 703 AFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEP 762
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIY 474
+ L MY G D+ + LE PN Y
Sbjct: 763 DLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTY 802
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 150/356 (42%), Gaps = 23/356 (6%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRV-PSEMTFHILIVAYLSAPVQGCLDEACSIYN 242
T L +G + A+ +F + G + P ++ L+ Y+ G L A + +
Sbjct: 267 TALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRI---GSLKNAEQVLD 323
Query: 243 RMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLI 302
M Q G P + ++ L A ++ G + A + + G++ ++S +
Sbjct: 324 EMSQCG-VAPDEATYSLLVDA-YTRAG-----RWESARILLKEMEADGVKPSSYVFSRI- 375
Query: 303 WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD 362
L ++D D ++ + +EMQ +G + ++ K + A + R+ E +
Sbjct: 376 -LAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEE 434
Query: 363 NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+ ++A+ K G +++E+F EM+E Y+ +I LL + E E E
Sbjct: 435 IEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVE 494
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-----CRPNRTIYGIY 477
+++ E E G+ P + +Y L ++Y G R A +C+E +P+ T+Y
Sbjct: 495 AMLSEMKEQGLVPNIITYTTLVDVY---GRSGRYKEAI-DCIEAMKADGLKPSPTMYHAL 550
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ + G + A + M +D + V+ N +++A+ V+A + M
Sbjct: 551 VNAYAQRGLADHALNVVKAMKAD-GLEVSILVLNSLINAFGEDRRVVEAFSVLQFM 605
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/371 (19%), Positives = 148/371 (39%), Gaps = 26/371 (7%)
Query: 157 IRENETG--FRVYEWMMQQ--HWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRV 212
+REN G VY+ M + H F + L L + + + R + D++ +G
Sbjct: 139 LRENMVGAVVLVYDNMRKDGVHPNVFTYNL---LVRALCQNNRVGAARKMLDEMARKGCP 195
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P ++T+ IV+ L + LDEA + L P + +N++ AL +
Sbjct: 196 PDDVTYAT-IVSVLCKLDR--LDEATEV------LAAMPPVAASYNAIVLALCRE----- 241
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
+ +Q+ + +++ GL+ Y+ ++ ++ + + M G
Sbjct: 242 -FRMQEVFSVVSDMVGRGLQPNVITYTTIV--DAFCKAGELRMACAILARMVITGCTPNV 298
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
+++R +G V DA W ++ T ++ + +G+ + I
Sbjct: 299 VTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNS 358
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
M++ +V Y +I+ KA + S+ + +G KP + Y N+ +++ M
Sbjct: 359 MEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLM 418
Query: 453 HDRL-HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
++ L LE C PN + + SL + + +A +F+ M + N R+ N
Sbjct: 419 FNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVP-NGRTYN 477
Query: 512 IILSAYLSSGD 522
++ G+
Sbjct: 478 ELIHGLFREGN 488
>gi|449451631|ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Cucumis sativus]
Length = 528
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 9/231 (3%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
V+ WM +Q WY D + +KL MGK+ + +F ++ N G P ++ LI A+
Sbjct: 113 VFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAH 172
Query: 226 LSAPVQG-CLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
L + + L + S + +M + +P +N L RA + Q +F
Sbjct: 173 LHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAK------VDQVNTLFK 226
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
+L S + DIY+ + +Y N + + + L+ M+ + ++ K
Sbjct: 227 DLDES--VVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGK 284
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
+ + E+ + LL S P F + Y K K+ E+FR+M++
Sbjct: 285 KQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKD 335
>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Glycine max]
Length = 819
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 37/304 (12%)
Query: 269 GGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
G ++ L +A+ +F ++ G+ +YS LI H Y + + R L EM G
Sbjct: 309 GFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLI--HGYCKSHNLLRALALHDEMISRGV 366
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
+ V+ +L + G + + L ES + A+ +A +G+ ++E
Sbjct: 367 KTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVE 426
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+ EM+ + V Y +I C + ++ KE E G+KP + +Y N+ L
Sbjct: 427 MVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTY-NVLAAGL 485
Query: 449 NLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN 506
+ H R + + +E +PN T + + +E L + G + +AE FN + D+ I +
Sbjct: 486 SRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSL-EDKNIEIY 544
Query: 507 T-------------------------------RSCNIILSAYLSSGDFVKAEKIYDLMCL 535
+ SC +LS +GD KA K+ D M L
Sbjct: 545 SAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLL 604
Query: 536 KKYE 539
E
Sbjct: 605 SNVE 608
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 97/209 (46%), Gaps = 12/209 (5%)
Query: 294 QKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
+KD+ S + Y Q+++ E ++L + EMQ +GF+ + L+SV+ CA+ +E +
Sbjct: 470 EKDVVSWSSMISGYAQNDLFDETLALFQ-EMQMSGFKPDETTLVSVISACARLAALEQGK 528
Query: 353 KTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
W+ NG+ + ++ Y K G +LE+F M E+ + ++ +I
Sbjct: 529 --WVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEK----GISTWNALIL 582
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL--EKCR 468
L E + + + + P +++ + ++G+ D F + K +
Sbjct: 583 GLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQ 642
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
PN YG ++ L AG +++AEE+ N M
Sbjct: 643 PNVKHYGCMVDLLGRAGKLQEAEELLNRM 671
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 138/364 (37%), Gaps = 62/364 (17%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P +T++ +I + +G + +AC++Y+ M+Q G + P HNS+ AL
Sbjct: 114 PDVVTYNTVIHGFFK---EGKIGKACNLYHEMMQQG-FVPDVVTHNSIINALCKARA--- 166
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF---- 328
+ AE + ++ +G+ K Y+ +I H Y E + + +EM G
Sbjct: 167 ---VDNAELLLRQMVDNGVPPNKVTYTSMI--HGYSTLGRWEEATKMFREMTGRGLIPDI 221
Query: 329 ----------------EEGKEVLLS---------------VLRVCAKEGDVEDAEKTWLR 357
+E E+ S +L A EG D ++
Sbjct: 222 VSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADM-MSFFN 280
Query: 358 LLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
++ D GI V+ + +AYAK G +++ I EMQ + S V Y +I LC+
Sbjct: 281 TMKGD-GIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRM 339
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTI 473
+ + TG++P Y +L + G + E + RPN
Sbjct: 340 GRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAF 399
Query: 474 YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS----CNIILSAYLSSGDFVKAEKI 529
+ + S+ G + A IF D + RS N ++ Y G+ KA +
Sbjct: 400 FNSIVHSICKEGRVMDAHHIF-----DLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSV 454
Query: 530 YDLM 533
D M
Sbjct: 455 LDAM 458
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 145/406 (35%), Gaps = 85/406 (20%)
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
E FA F+ + G V + + F ILI AY +G +DEA I + M Q G P
Sbjct: 269 EGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAK---RGMMDEAMLILSEM-QGQGLSP 324
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
+++L AL L A F+ ++ +G++ +Y LI + + D
Sbjct: 325 DVFTYSTLISALCRMG------RLADAVDKFNQMIGTGVQPNTVVYHSLI--QGFCTHGD 376
Query: 313 KERISLLKKEMQQAGFEEGKEVLL-SVLRVCAKEGDVEDAEKTW---------------- 355
+ L EM G S++ KEG V DA +
Sbjct: 377 LVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFN 436
Query: 356 ---------------LRLLES--DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQER 396
+L++ GI F Y + Y K G L +FREM ++
Sbjct: 437 TLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDK 496
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY-INLTNMYLNLGMHDR 455
+ Y+ I++ L +A T + ++ E + G +P+Y I L + N +
Sbjct: 497 KIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEA 556
Query: 456 LHLAFSECLEKCR-----------------------------------PNRTIYGIYLES 480
+ + C + PN + YGI + +
Sbjct: 557 IVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRN 616
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
L G++E+A+ +F+ M +R N + L G+ VKA
Sbjct: 617 LLKEGSVEEADNMFSSMEKSGCAPC-SRLLNDTIRTLLEKGEIVKA 661
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 146/354 (41%), Gaps = 25/354 (7%)
Query: 195 KFAKCRDI---FDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQ 251
K K D+ F D+I G P+ T++I+I +G ++ A ++ M + G
Sbjct: 107 KLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK---EGDVEAARGLFEEM-KFRGLV 162
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P +NS+ G + + L F + E Y+ LI
Sbjct: 163 PDTVTYNSMIDGF----GKVGR--LDDTVCFFEEMKDMCCEPDVITYNALINCFC---KF 213
Query: 312 DKERISL-LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
K I L +EM+ G + +++ KEG ++ A K ++ + G+ +
Sbjct: 214 GKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV--GLVPNEY 271
Query: 371 VYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEF 428
Y ++A KIG + + EM + +V Y +I+ LC AE + E L +
Sbjct: 272 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 331
Query: 429 VETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNI 487
G+ P + SY L + ++ DR +E + +P+ +YG ++ L + I
Sbjct: 332 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 391
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIE 541
E A+ + N M + I N+ ++ AY SG+ + + D M K+ +IE
Sbjct: 392 EAAKVVMNEM-KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM--KELDIE 442
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 56/297 (18%), Positives = 111/297 (37%), Gaps = 46/297 (15%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
+ L D KE + + D+ G VP+E T+ LI A G L +A + N
Sbjct: 239 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKI---GNLSDAFRLGNE 295
Query: 244 MIQLG----------------------------------GYQPRPSLHNSLFRALVSKPG 269
M+Q+G G P + +N+L V
Sbjct: 296 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 355
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
+ +A + + L G++ +Y IW + I+ ++ + EM++ G +
Sbjct: 356 ------MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM--NEMKECGIK 407
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEI 389
+ +++ K G+ + + E D + F ++ K K+++
Sbjct: 408 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDY 467
Query: 390 FREMQERLG-SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
F + G A+ + +I+ LCK + E +L ++ V+ G+ P +Y +L +
Sbjct: 468 FNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 524
>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
Length = 806
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 111/263 (42%), Gaps = 25/263 (9%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+FD +I +G P+E T+ ++ A LD I+++ I G P + NSL
Sbjct: 337 LFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQ-ITASGIDADPIVQNSLI 395
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
+ ++ G L +A +F ++ LE K + S + +Y N + + +
Sbjct: 396 N-MYARSG-----LLAEAREVFDSI----LENSKTVVSFTTMISAYAHNGHPRQALEIFR 445
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL--RLLESDNGIPTPAFVYK--MEAY 377
EM G + +VL C GD+ A W+ R++ES P F Y ++ Y
Sbjct: 446 EMTARGVAPNEITFATVLAACVAIGDL--ASGAWIHERMIESGLDSSDP-FAYNSLVDMY 502
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
AK G+ + +F M+ + + A+ II ++ L +++G+ P +
Sbjct: 503 AKCGDLGFAARVFETMKTK----DLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDI 558
Query: 438 PSYINLTNMYLNLG---MHDRLH 457
+ L NLG M +++H
Sbjct: 559 ATLSTLLVACANLGDLAMGEKIH 581
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 137/354 (38%), Gaps = 48/354 (13%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
+IF ++ +G P+E+TF ++ A ++ G L I+ RMI+ G P +NSL
Sbjct: 442 EIFREMTARGVAPNEITFATVLAACVAI---GDLASGAWIHERMIESGLDSSDPFAYNSL 498
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
+ +K G L A +F + T L I + + + + +D L
Sbjct: 499 VD-MYAKCGDLGF-----AARVFETMKTKDLVAWTTIIAANVQSGNNRAALD------LY 546
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEA--YA 378
M Q+G L ++L CA GD+ EK + L S + A A YA
Sbjct: 547 DRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSK--LEQDAHFQNALAAMYA 604
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP--- 435
K G K+ ++R R + V + ++ + + L E G++P
Sbjct: 605 KCGSLEKATRLYR----RCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEV 660
Query: 436 -LMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+P I+ + L + H S+ +P+ +G ++ L AG + AEE+
Sbjct: 661 TFIPVLISCSQAGLVAEGREFFHSITSD--YGSQPSAEHFGCMVDVLGRAGKLRDAEELL 718
Query: 495 NHM------------------HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+ M H+D IG C + L S+ FV +IY
Sbjct: 719 DSMPFYPDEIAWQSLLSSCKLHTDAEIGTRAAECLLELDPE-STSQFVALSQIY 771
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 118/272 (43%), Gaps = 14/272 (5%)
Query: 282 IFHNLLTSGLEIQKDIYSGLI--WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVL 339
+F ++ G+ + Y+ ++ H +D I +R + ++ +G + V S++
Sbjct: 337 LFDGMIAEGINPNEKTYASVVSAIAHLGRDAI-LDRGRKIHSQITASGIDADPIVQNSLI 395
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
+ A+ G + +A + + +LE N +F + AYA G ++LEIFREM R +
Sbjct: 396 NMYARSGLLAEAREVFDSILE--NSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVA 453
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP-SYINLTNMYLNLGMHDRLHL 458
+ + ++ + + + +E+G+ P +Y +L +MY G L
Sbjct: 454 PNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCG-----DL 508
Query: 459 AFSECLEKCRPNRTI--YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F+ + + + + + + + +GN A ++++ M I + + + +L A
Sbjct: 509 GFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRM-LQSGIHPDIATLSTLLVA 567
Query: 517 YLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL 548
+ GD EKI+ K E ++ + L
Sbjct: 568 CANLGDLAMGEKIHRQALRSKLEQDAHFQNAL 599
>gi|297733647|emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 136/301 (45%), Gaps = 13/301 (4%)
Query: 232 GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGL 291
G D+A +Y+ M + +P + S+ ++ K G +K A F + G+
Sbjct: 256 GRYDDAWKVYDEM-ETNNIRP-DHVTCSIMITVMRKDGHSAK----DAWEFFQRMNRKGV 309
Query: 292 EIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
+ ++ LI S+ D K +++ EM++ G V +++ +K VE+A
Sbjct: 310 KWSLEVLGALI--KSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEA 367
Query: 352 EKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
E + + ++ +PT A + M+AY++ + + EMQ+ +V +Y +I
Sbjct: 368 EGLFGEM-KAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLIS 426
Query: 411 LLCKAEE-TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCR 468
+ ++ +++ + G+KP SY L + Y G H++ + AF E +
Sbjct: 427 AYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIK 486
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEK 528
P+ Y L++ + AG+ + +I+ M SD+ G + NI+L + G +++A
Sbjct: 487 PSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRV-TFNILLDGFAKQGHYMEARD 545
Query: 529 I 529
+
Sbjct: 546 V 546
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 112/265 (42%), Gaps = 11/265 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D K + + +F ++ +G +P+ T++IL+ AY S +Q + I N ++
Sbjct: 354 LMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAY-SRRMQPEI-----IENLLL 407
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
++ P++ + + L+S G K A+ F + G++ Y+ LI H
Sbjct: 408 EMQDMGLEPNVKS--YTCLISAYGRQKKMSDMAAD-AFLRMKKVGIKPTSHSYTALI--H 462
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+Y E+ + M++ G + E ++L + GD + K W +L
Sbjct: 463 AYSVGGWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEG 522
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
F ++ +AK G +M++ ++ E + +V Y+ ++ + + L+
Sbjct: 523 TRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLL 582
Query: 426 KEFVETGMKPLMPSYINLTNMYLNL 450
KE +KP +Y + Y+ +
Sbjct: 583 KEMTSLNLKPDSITYSTMIYAYVRV 607
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 149/343 (43%), Gaps = 19/343 (5%)
Query: 194 RKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPR 253
R+ R + + ++ G P ++++ LI A QG + EA ++ +++ GY+P
Sbjct: 237 RRLESARQLLEKMVLNGCKPDIVSYNALIHGL--AREQG-VSEALKLFGSVLR-QGYEPE 292
Query: 254 PSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK 313
+N L L L + + +A +F L+ GLE Y+ +++
Sbjct: 293 VPTYNILIDGL------LKEDRVNEAFELFSGLVKHGLEPDAITYT--VFIDGLCKAGRV 344
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVY 372
E L+ K+M + G +V+ KE V++AE L +E+ P +F
Sbjct: 345 EDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAE-VLLSGMEAKGCSPNAISFNT 403
Query: 373 KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA-EETELTE--SLMKEFV 429
+ + G++ K++ F+EM +R +V Y+ +++ LCKA +E + E +L +
Sbjct: 404 LICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI 463
Query: 430 ETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIE 488
E G P + +Y L + G + D L + + C PN Y + L ++
Sbjct: 464 EKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVD 523
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
+A E+F M + +T + I+SA KA ++D
Sbjct: 524 EALELFVAMVEKGCV-PDTITYGTIISALCKQEMVDKALALFD 565
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 110/263 (41%), Gaps = 20/263 (7%)
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGL-EIQK-D 296
++Y++++++ Y P L R+L L +++A LL GL +I +
Sbjct: 3 TVYDKLVRI--YSPDAYTVGILLRSL------LKSGKIEKAHRFVEQLLVKGLCDISTFN 54
Query: 297 IY-SGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTW 355
IY SGL D + M++ GF + ++L G + DA+ +
Sbjct: 55 IYISGLCRASRIGDA------QTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALY 108
Query: 356 LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
R++++ + + + K+G+ ++L+IF +R V Y+ +I CKA
Sbjct: 109 ERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKA 168
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYG 475
++ + + +++ V + P + +Y +L N G D + + + PN Y
Sbjct: 169 DKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD--KGFSPNVITYS 226
Query: 476 IYLESL-KNAGNIEKAEEIFNHM 497
+ L + +E A ++ M
Sbjct: 227 TLISGLCRELRRLESARQLLEKM 249
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 128/308 (41%), Gaps = 16/308 (5%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRP 254
K + +FD +I +G P +T+ LI G A + M+Q QP
Sbjct: 113 KIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKV---GNTSAAIRLLGSMVQ-KNCQPNV 168
Query: 255 SLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE 314
+N++ +L + +A +F ++T G I DI++ +H+ + + +
Sbjct: 169 FAYNTIIDSLCKD------RQVTEAFNLFSEMVTKG--ISPDIFTYNSLIHALCNLCEWK 220
Query: 315 RISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-AFVYK 373
++ L EM + +V+ KEG V +A ++++ +P ++
Sbjct: 221 HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTL 280
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ Y KI K++ +F EM + Y +I LC E + +L E V
Sbjct: 281 INGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 340
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGIYLESLKNAGNIEKAE 491
P + +Y L + YL + +A + +E P+ + I ++ + AG +E A
Sbjct: 341 IPNLVTYRILLD-YLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAAR 399
Query: 492 EIFNHMHS 499
++F+++ S
Sbjct: 400 DLFSNLSS 407
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ K+G ++ + M ++ +V AY+ II+ LCK + +L E V G+
Sbjct: 140 INGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGI 199
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEE 492
P + +Y +L + NL + +E ++ K P+ + +++L G + +A +
Sbjct: 200 SPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHD 259
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
+ + M N S N +++ Y KA ++ MC
Sbjct: 260 VVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMC 301
>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
Length = 554
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 11/217 (5%)
Query: 323 MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK----TWLRLLESDNGIPTPAFVYKMEAYA 378
M +AG + +++ VC +EG VE+ + W DN T + +
Sbjct: 164 MTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVV----VRSLC 219
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
+ G F E FR M E +V Y I+ LCK + +++E V G+KP +
Sbjct: 220 EKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVY 279
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
++ L + +G +R F + ++ +PN Y + + G + +AE +
Sbjct: 280 THTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVR 339
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
M +Q + NT + ++ + G F +A ++ + M
Sbjct: 340 M-VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKM 375
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 105/264 (39%), Gaps = 9/264 (3%)
Query: 270 GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFE 329
GL A +F + +G+ + + L+ + + + E + L M + GF
Sbjct: 148 GLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKV--EEVDALLAAMWRYGFS 205
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSL 387
V+R ++G +D + + R+LE G P Y ++ K ++
Sbjct: 206 LDNATCTVVVRSLCEKGRFKDVSEFFRRMLEM--GTPPNVVNYTAWIDGLCKRRYVKQAF 263
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE-TGMKPLMPSYINLTNM 446
+ EM R +V + +I+ LCK TE L + ++ + KP + +Y +
Sbjct: 264 HVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGG 323
Query: 447 YLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV 505
Y G R + +E+ +PN Y + G+ ++A E+ N M + +
Sbjct: 324 YCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLP- 382
Query: 506 NTRSCNIILSAYLSSGDFVKAEKI 529
N + N ++ + G +A K+
Sbjct: 383 NIYTYNAVIDGFCKKGKIQEAYKV 406
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 100/240 (41%), Gaps = 12/240 (5%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSE 215
+I E FR++ +++ Y+ + T + +E K A+ + ++ QG P+
Sbjct: 290 KIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNT 349
Query: 216 MTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYY 275
T+ LI + G D A + N+M Q G+ P +N++ G K
Sbjct: 350 NTYTTLIGGHCKG---GSFDRAFELMNKMKQ-EGFLPNIYTYNAVI------DGFCKKGK 399
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
+Q+A + + GL+ K Y+ LI H Q +I + L + M + G E
Sbjct: 400 IQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYA-LDLFDR-MVENGCCPDIEAY 457
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
S++ ++ +E+++K + + L + + Y K+G +L +F M +
Sbjct: 458 TSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQ 517
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 150/359 (41%), Gaps = 19/359 (5%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M + Y D L TKL R K + + I+ + P ++ LI +
Sbjct: 115 MVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPDVFAYNALINGFCK--- 170
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
+D+A + +RM + + P +N + +L S+ L A + + LL+
Sbjct: 171 MNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGK------LDLALKVLNQLLSDN 223
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
+ Y+ LI + +D E + L+ EM G + +++R KEG V+
Sbjct: 224 CQPTVITYTILIEATMLEGGVD-EALKLMD-EMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 351 AEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
A + +R LE P ++ + A G++ + ++ +M +V Y +I
Sbjct: 282 AFE-MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL--EKC 467
LC+ + E +L+K E G+ P SY L + G D + + F E + + C
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD-VAIEFLETMISDGC 399
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
P+ Y L +L G ++A EIF + + N+ S N + SA SSGD ++A
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKL-GEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 2/192 (1%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
K ++DA + R+ D T + + + G+ +L++ ++ +V
Sbjct: 169 CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTV 228
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR-LHLAFS 461
Y +IE + LM E + G+KP M +Y + GM DR + +
Sbjct: 229 ITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRN 288
Query: 462 ECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
L+ C P+ Y I L +L N G E+ E++ M S++ N + +I+++ G
Sbjct: 289 LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC-DPNVVTYSILITTLCRDG 347
Query: 522 DFVKAEKIYDLM 533
+A + LM
Sbjct: 348 KIEEAMNLLKLM 359
>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
Length = 806
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 137/354 (38%), Gaps = 48/354 (13%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
+IF ++ +G P+E+TF ++ A ++ G L I+ RMI+ G P +NSL
Sbjct: 442 EIFREMTARGVAPNEITFATVLAACVAI---GDLASGAWIHERMIESGLDSSDPFAYNSL 498
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
+ +K G L A +F + T L I + + + + +D L
Sbjct: 499 VD-MYAKCGDLGF-----AARVFETMKTKDLVAWTTIIAANVQSGNNRAALD------LY 546
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEA--YA 378
M Q+G L ++L CA GD+ EK + L S + A A YA
Sbjct: 547 DRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSK--LEQDAHFQNALAAMYA 604
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP--- 435
K G K+ ++R R + V + ++ + + L E G++P
Sbjct: 605 KCGSLEKATRLYR----RCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEV 660
Query: 436 -LMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+P I+ + L + H S+ +P+ +G ++ L AG + AEE+
Sbjct: 661 TFIPVLISCSQAGLVAEGREFFHSITSD--YGSQPSAEHFGCMVDVLGRAGKLRDAEELL 718
Query: 495 NHM------------------HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+ M H+D IG C + L S+ FV +IY
Sbjct: 719 DSMPFYPDEIAWQSLLSSCKLHTDAEIGTRAAECLLELDPE-STSQFVALSQIY 771
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 111/263 (42%), Gaps = 25/263 (9%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+FD +I +G P+E T+ ++ A LD I+++ I G P + NSL
Sbjct: 337 LFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQ-ITASGIDADPIVQNSLI 395
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
+ ++ G L +A +F ++ LE K + S + +Y N + + +
Sbjct: 396 N-MYARSG-----LLAEAREVFDSI----LENSKTVVSFTTMIAAYAHNGHPRQALEIFR 445
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWL--RLLESDNGIPTPAFVYK--MEAY 377
EM G + +VL C GD+ A W+ R++ES P F Y ++ Y
Sbjct: 446 EMTARGVAPNEITFATVLAACVAIGDL--ASGAWIHERMIESGLDSSDP-FAYNSLVDMY 502
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
AK G+ + +F M+ + + A+ II ++ L +++G+ P +
Sbjct: 503 AKCGDLGFAARVFETMKTK----DLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDI 558
Query: 438 PSYINLTNMYLNLG---MHDRLH 457
+ L NLG M +++H
Sbjct: 559 ATLSTLLVACANLGDLAMGEKIH 581
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 118/272 (43%), Gaps = 14/272 (5%)
Query: 282 IFHNLLTSGLEIQKDIYSGLI--WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVL 339
+F ++ G+ + Y+ ++ H +D I +R + ++ +G + V S++
Sbjct: 337 LFDGMIAEGINPNEKTYASVVSAIAHLGRDAI-LDRGRKIHSQITASGIDADPIVQNSLI 395
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
+ A+ G + +A + + +LE N +F + AYA G ++LEIFREM R +
Sbjct: 396 NMYARSGLLAEAREVFDSILE--NSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVA 453
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP-SYINLTNMYLNLGMHDRLHL 458
+ + ++ + + + +E+G+ P +Y +L +MY G L
Sbjct: 454 PNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCG-----DL 508
Query: 459 AFSECLEKCRPNRTI--YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F+ + + + + + + + +GN A ++++ M I + + + +L A
Sbjct: 509 GFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRM-LQSGIHPDIATLSTLLVA 567
Query: 517 YLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL 548
+ GD EKI+ K E ++ + L
Sbjct: 568 CANLGDLAMGEKIHRQALRSKLEQDAHFQNAL 599
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 125/315 (39%), Gaps = 51/315 (16%)
Query: 134 ILNAQKKW-LRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
+ +A KW LR +Y L +R+ + + GFR+ M+ + D + L + +
Sbjct: 164 VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG-VQPDVYTYSVLINGL 222
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
KE K ++FD+++ +G VP+ +TF LI + G +D A IY +M
Sbjct: 223 CKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCK---NGRVDLAMEIYKQM------ 273
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
L SL L++ +N L GL + D L D
Sbjct: 274 -----LSQSLLPDLIT-----------------YNTLIYGLCKKGD-------LKQAHDL 304
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
ID EM G + K +++ C KEGD++ A + R+++ + + A+
Sbjct: 305 ID---------EMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 355
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
+ + G + + ++ REM Y II CK + L+KE
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHR 415
Query: 431 TGMKPLMPSYINLTN 445
G P + +Y L N
Sbjct: 416 DGHAPSVVTYNVLMN 430
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+E K+ F + E+ E AS+ ++ ++ CK + + +S+ + G+
Sbjct: 114 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 173
Query: 434 KPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEE 492
+P + SY L N Y+ LG + + L + +P+ Y + + L ++ A E
Sbjct: 174 RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANE 233
Query: 493 IFNHM 497
+F+ M
Sbjct: 234 LFDEM 238
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 126/295 (42%), Gaps = 37/295 (12%)
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
KEM Q G E ++L+ + +++A + +L + + I ++ + + +
Sbjct: 229 KEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEA 288
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM-KPLMPS 439
GE K+ +F EM + + +V Y+ +I++ CK + + ++ +E V G+ P + +
Sbjct: 289 GEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVT 348
Query: 440 YINLTNMYLNLGMHDRLHLAFSECL--EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ + ++G +R L F E + R + Y + + +AG IEK E+F M
Sbjct: 349 FNVVIRGLCHVGDMERA-LGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKM 407
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRK 557
D N + N+++SA FV+ +K DL+ K +E L + NR
Sbjct: 408 -GDGLCLPNLDTYNVLISAM-----FVR-KKSEDLVVAGKLLMEMVERGFLPRKFTFNR- 459
Query: 558 EVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRR 612
+L GL I ++ + ++R Q SR V+RR
Sbjct: 460 ---------------------VLNGLVITGNQDFAKDILRMQ----SRCGRVVRR 489
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 77/173 (44%), Gaps = 10/173 (5%)
Query: 366 PTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
P+P E YA IG+ +++ F M E + +++ ++++LCK+ E L
Sbjct: 134 PSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDL 193
Query: 425 MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR----PNRTIYGIYLES 480
++ +++ +P SY L N Y + R +A E + P Y L+
Sbjct: 194 LRT-LKSRFRPDTVSYNILANGYC---LKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKG 249
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ I++A E + M + ++ S ++ + +G+ KA++++D M
Sbjct: 250 YFRSNQIKEAWEFYLEM-KKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEM 301
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 156/372 (41%), Gaps = 29/372 (7%)
Query: 177 RFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY----LSAP-VQ 231
R D T + + + ++ + ++F ++ QG P+ +T+++++ Y S P +
Sbjct: 170 RLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIV 229
Query: 232 GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGL 291
LDE ++ G +P +++ A GL + +A F +L G
Sbjct: 230 ALLDE--------MRAAGVEPDDFTASTVIAACCRD--GL----VDEAVAFFEDLKARGH 275
Query: 292 EIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
Y+ L+ + N E + +LK EM+Q G + + A+ G E+A
Sbjct: 276 TPCVVTYNALLQVFGKAGNY-TEALRVLK-EMEQDGCQPDAVTYNELAGTYARAGFYEEA 333
Query: 352 EKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
K L + S +P AF Y M AY IG+ ++L +F +M++ +V Y+ I+
Sbjct: 334 AKC-LDTMTSKGLLPN-AFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFIL 391
Query: 410 ELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-- 467
+L K + ++ E +G P ++ + + GM D + E ++ C
Sbjct: 392 GMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVL-EGMKSCGV 450
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
+R Y + + G+ A +++N M S T + N +L+ GD+ A+
Sbjct: 451 ELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLT-TYNALLNVLSRQGDWSTAQ 509
Query: 528 KIYDLMCLKKYE 539
I M K ++
Sbjct: 510 SIVSKMRTKGFK 521
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 108/274 (39%), Gaps = 47/274 (17%)
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK 273
S T++ LI AY G A +YN M G+ P + +N+L L S+ G S
Sbjct: 453 SRDTYNTLIAAYGRC---GSRTNAFKMYNEMTS-AGFAPCLTTYNALLNVL-SRQGDWS- 506
Query: 274 YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI------DKE------------- 314
A+ I + T G + YS L+ ++ NI +KE
Sbjct: 507 ----TAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVIL 562
Query: 315 -----------RISLLKKEMQQA---GFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
R+ ++K Q+ G+ + S+L + AK G + + + +
Sbjct: 563 RTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQ 622
Query: 361 SDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
S G+ Y M+ YAK E ++ +I +++ V +Y+ +I CK
Sbjct: 623 S--GLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLI 680
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
+ + ++ E + GM P + +Y L Y +L M
Sbjct: 681 KEAQRILSEMIADGMAPCVVTYHTLVGGYASLEM 714
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 24/254 (9%)
Query: 155 MRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
+R+ + + GFR+ + M + D + L + + KE K + ++ +++++ G VP+
Sbjct: 182 IRLGDLDEGFRL-KSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPN 240
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY 274
+TF LI + G +D A IY +M+ G+ P +N+L L +
Sbjct: 241 GVTFTTLIDGHCK---NGKVDLAMEIYKQMLS-QGFLPDLITYNTLIYGLCRRGD----- 291
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
L QA + ++ GL+ K Y+ LI + D E L+K M + +
Sbjct: 292 -LGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEG--DLEITFELRKRMIRENIRLDEVT 348
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRL----LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIF 390
+++ +EG DAEK + L+ DNG + M + K G+ + ++
Sbjct: 349 YTALISGLCREGRAGDAEKMLREMLTVGLKPDNG----TYTMIMNEFCKTGDVKTASKLL 404
Query: 391 REMQERLGSASVPA 404
REMQ + VP
Sbjct: 405 REMQR---NGPVPG 415
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 91/216 (42%), Gaps = 10/216 (4%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG-IPTPA-FVYKMEA 376
LK M G + ++ KE +++A + +L DNG +P F ++
Sbjct: 193 LKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEML--DNGLVPNGVTFTTLIDG 250
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
+ K G+ ++EI+++M + + Y+ +I LC+ + L++E + G+KP
Sbjct: 251 HCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPD 310
Query: 437 MPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
+Y L + G + L E R + Y + L G AE++
Sbjct: 311 KITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLR 370
Query: 496 HMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKI 529
M T+G+ + + +I++ + +GD A K+
Sbjct: 371 EM---LTVGLKPDNGTYTMIMNEFCKTGDVKTASKL 403
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/313 (16%), Positives = 125/313 (39%), Gaps = 18/313 (5%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + + + R + D++ +G P ++T+ ++ A + G +DEA +
Sbjct: 175 LVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCT---LGRVDEATEV----- 226
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
L P + +N++ AL + + +Q+ + +++ GL+ Y+ ++ +
Sbjct: 227 -LSAAPPVAASYNAVILALCRE------FRMQEVFAVVGDMVGRGLQPNVITYTTIV--N 277
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
++ + + M G +++ +G V DA W ++
Sbjct: 278 AFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAP 337
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
T ++ + +G+ + + +M++ + Y +I+ KA + + S+
Sbjct: 338 STVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIW 397
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNA 484
+ +G KP + Y N+ ++ M ++ + L E C PN + + SL N
Sbjct: 398 NDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNC 457
Query: 485 GNIEKAEEIFNHM 497
+ +A +F+ M
Sbjct: 458 RRVGRALGVFHEM 470
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 140/347 (40%), Gaps = 60/347 (17%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ + G P TF+ LI AY G +A +Y M + G+ + +N+L
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRC---GSEVDASKMYGEMTR-AGFNACVTTYNALL 533
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN-IDKERISLLK 320
AL K + E + ++ + G + + YS ++ ++ N + ERI
Sbjct: 534 NALARKGD------WRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRI 587
Query: 321 KEMQ--------------------------------QAGFEEGKEVLLSVLRVCAKEGDV 348
KE Q + G++ + S+L + +
Sbjct: 588 KEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMY 647
Query: 349 EDAEKTWLRLLES--DNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPA 404
+ AE +LES ++G+ Y M+ Y + GE K+ EI + +++ + +
Sbjct: 648 DQAEG----ILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVS 703
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
Y+ +I+ C+ + ++ E E G++P + +Y + Y +GM + EC+
Sbjct: 704 YNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVI-ECM 762
Query: 465 EK--CRPNRTIYGIYLESLKNAGNIEKAEEI------FNHMHSDQTI 503
K CRPN + + ++ AG +A + F+ DQ+I
Sbjct: 763 AKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQSI 809
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
EM+ G + + +VL CA+EG + +A++ + L T + ++ + K G
Sbjct: 271 EMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAG 330
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ ++L + +EM+E A Y++++ +A ++ +++ + G+ P +Y
Sbjct: 331 VYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYT 390
Query: 442 NLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTIYGIYLESL 481
+ + Y G D L L +S C PN Y L L
Sbjct: 391 TVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLL 431
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 72/397 (18%), Positives = 160/397 (40%), Gaps = 32/397 (8%)
Query: 155 MRIRENETGFRVYEWMMQQ---HWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGR 211
+RI E+ + V ++ + Y D T + + K+ K D+F+ + G
Sbjct: 182 VRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGP 241
Query: 212 VPSEMTFHILIVAYLSA-----PVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVS 266
P+ +T+++++ + + G LDE + ++ ++ + L L
Sbjct: 242 SPTLVTYNVILDVFGKMGRSWRKILGVLDE---MRSKGLKFDEFTCSTVLSACAREGL-- 296
Query: 267 KPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQA 326
L++A+ F L + G E Y+ L+ + + + E +S+LK EM++
Sbjct: 297 ---------LREAKEFFAELKSCGYEPGTVTYNALLQVFG-KAGVYTEALSVLK-EMEEN 345
Query: 327 GFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFM 384
++ + G ++A + + G+ A Y ++AY K G+
Sbjct: 346 SCPADSVTYNELVAAYVRAGFSKEAAGVIEMM--TKKGVMPNAITYTTVIDAYGKAGKED 403
Query: 385 KSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLT 444
++L++F M+E + Y+ ++ LL K + ++ + G P ++ +
Sbjct: 404 EALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Query: 445 NMYLNLGMHDRLHLAFSECLEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQT 502
+ N GM ++ F E ++ C P+R + + + G+ A +++ M +
Sbjct: 464 ALCGNKGMDKFVNRVFRE-MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM-TRAG 521
Query: 503 IGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
+ N +L+A GD+ E + M K ++
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFK 558
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 132/316 (41%), Gaps = 27/316 (8%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDE----ACSIYNRMI 245
MG+ K K I +++ P+ +TF++LI + C DE A ++ M
Sbjct: 278 MGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGF-------CKDENLSAALKVFEEM- 329
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
Q G +P +NSL L ++ L +A+ + +L+S L+ Y+ LI +
Sbjct: 330 QSQGLKPTVVTYNSLVNGLCNEGK------LNEAKVLLDEMLSSNLKPNVITYNALINGY 383
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+ +++ R L + + G ++L K G +E+A +LE G
Sbjct: 384 CKKKLLEEAR--ELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEK--GF 439
Query: 366 PTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
A Y + + + G+ + + EMQ R A Y+ +I C+ +E +
Sbjct: 440 LPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAAR 499
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGIYLESL 481
L+ E ++ G+KP +Y L N Y G + R L + +EK N Y + ++
Sbjct: 500 LIDEMLDKGLKPSHLTYNILLNGYCMEG-NLRAALNLRKQMEKEGRWANVVTYNVLIQGY 558
Query: 482 KNAGNIEKAEEIFNHM 497
G +E A + N M
Sbjct: 559 CRKGKLEDANGLLNEM 574
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 15/189 (7%)
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAK---IGEFMKSLEIFREMQERLG 398
K GDV D K W G Y ++ Y K +G+ K+ I +EM E
Sbjct: 248 KAGDVVDDMKVW--------GFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKV 299
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
S + ++ +I+ CK E + +E G+KP + +Y +L N N G + +
Sbjct: 300 SPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKV 359
Query: 459 AFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
E L +PN Y + +E+A E+F+++ Q + N + N +L Y
Sbjct: 360 LLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNI-GKQGLTPNVITFNTLLHGY 418
Query: 518 LSSGDFVKA 526
G +A
Sbjct: 419 CKFGKMEEA 427
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 74/380 (19%), Positives = 154/380 (40%), Gaps = 14/380 (3%)
Query: 157 IRENETGFR--VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
++ENE G VY+ M+++ T + + + K K K D+ DD+ G P+
Sbjct: 206 VKENEFGGVEFVYKEMIRRKISPNLITFNT-VINGLCKVGKLNKAGDVVDDMKVWGFWPN 264
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY 274
+T++ LI Y G + +A +I M++ + S ++ F L+ G
Sbjct: 265 VVTYNTLIDGYCKMGRVGKMYKADAILKEMVE-----NKVSPNSVTFNVLID--GFCKDE 317
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
L A +F + + GL+ Y+ L+ + +++ ++ L EM + +
Sbjct: 318 NLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLL--DEMLSSNLKPNVIT 375
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
+++ K+ +E+A + + + + F + Y K G+ ++ + + M
Sbjct: 376 YNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVML 435
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHD 454
E+ + Y+ +I C+ + E ++L+ E G+K +Y L + +
Sbjct: 436 EKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPK 495
Query: 455 RLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNII 513
+ E L+K +P+ Y I L GN+ A + M + N + N++
Sbjct: 496 KAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWA-NVVTYNVL 554
Query: 514 LSAYLSSGDFVKAEKIYDLM 533
+ Y G A + + M
Sbjct: 555 IQGYCRKGKLEDANGLLNEM 574
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 72/164 (43%), Gaps = 5/164 (3%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ A K EF +++EM R S ++ ++ +I LCK + ++ + G
Sbjct: 202 LSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGF 261
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLA---FSECLE-KCRPNRTIYGIYLESLKNAGNIEK 489
P + +Y L + Y +G +++ A E +E K PN + + ++ N+
Sbjct: 262 WPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSA 321
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A ++F M S Q + + N +++ + G +A+ + D M
Sbjct: 322 ALKVFEEMQS-QGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEM 364
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Query: 323 MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKI 380
M++ G L +++ K DA R + + G P ++ Y + ++
Sbjct: 146 MREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREM-PNRGCPPDSYTYGTLINGLCRL 204
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G+ ++ E+F+EM+ + S +V Y +I LC++++ + L++E G+KP + +Y
Sbjct: 205 GKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTY 264
Query: 441 INLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+L + + G R L L + PN Y + L G +++A EI + M
Sbjct: 265 SSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRM 322
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 10/171 (5%)
Query: 351 AEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
AE+ R+ E I F+ AY ++ + + ++ +FR+M+E S +Y +
Sbjct: 69 AEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFA 128
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSY-INLTNMYLNLGMHDRLHLAFSECLEK-CR 468
+L + +L + E G+ P + S + + + N G D F E + C
Sbjct: 129 ILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCP 188
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLS 519
P+ YG + L G I +A+E+F M T++C+ + Y S
Sbjct: 189 PDSYTYGTLINGLCRLGKIGEAKELFKEME--------TKACSPTVVTYTS 231
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 161/367 (43%), Gaps = 38/367 (10%)
Query: 199 CRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN 258
CR +F ++ +G P+ ++++ L+ AY S G EA S++N I+ G +P +
Sbjct: 331 CRAVFSTMVAEGLKPNIVSYNTLMGAYAS---HGMNKEALSVFN-AIKNSGLRPDVVSYT 386
Query: 259 SLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN-IDKERIS 317
SL + G S+ ++A +F + L+ Y+ +I +Y N + E +
Sbjct: 387 SLLNSY-----GRSQQ-PKKAREVFEMMKRDKLKPNIVSYNAMI--DAYGSNGLLAEAVE 438
Query: 318 LLKKEMQQAGFEEGKEVLLSVLRVCAK-------EGDVEDAEKTWLRLLESDNGIPTPAF 370
+L+ EM+Q G + ++L C + + ++ AE+ ++L T A+
Sbjct: 439 VLR-EMEQDGIYPNAVSICTLLAACGRCSRKVNIDVVLQAAERRHIKL-------NTIAY 490
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
+ +Y +GEF K+ ++R M++ + +I CK T+ E+L EF+
Sbjct: 491 NSAIGSYMNVGEFEKATSMYRSMRKSKVIPDAVTFTVLISGCCKM--TKYCEAL--EFLS 546
Query: 431 TGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEK 489
M +P +T + G F++ + C P+ Y + L + A + +K
Sbjct: 547 EMMDLKIP----MTKEAYSSGKITEAESMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWKK 602
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLD 549
A + M + I +T +C+ ++ A+ GD K + + M K+ + A ++
Sbjct: 603 ACALLQEME-EYNIQPDTIACSALMRAFNKGGDPSKVLILAEFMREKEIPLSDAIFFEMV 661
Query: 550 YVLSLNR 556
SL R
Sbjct: 662 SACSLLR 668
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 111/253 (43%), Gaps = 10/253 (3%)
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
I ++L + + Y+ LI N +E + L KK M + G G +++ + +
Sbjct: 192 IMEDMLQKAIPPSRSTYNNLINACGSSGNW-REALKLCKK-MTENGV--GPDLVTHNIIL 247
Query: 342 CAKEGDVEDAEK-TWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
A + + A+ ++ L++ N P T + K+G++ K++ IF+ M+E+
Sbjct: 248 SAYKTGAQYAKALSYFELMKGTNIRPDTTTLNIIIYCLTKLGQYEKAIGIFKSMREKRAE 307
Query: 400 A--SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
V + II L + E ++ V G+KP + SY L Y + GM+
Sbjct: 308 CHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEAL 367
Query: 458 LAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
F+ RP+ Y L S + +KA E+F M D+ + N S N ++ A
Sbjct: 368 SVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDK-LKPNIVSYNAMIDA 426
Query: 517 YLSSGDFVKAEKI 529
Y S+G +A ++
Sbjct: 427 YGSNGLLAEAVEV 439
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 151/376 (40%), Gaps = 36/376 (9%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
MQ+ + D L + G+ ++ +I +D++ + PS T++ LI A S+
Sbjct: 161 MQKWRCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSS-- 218
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G EA + +M + G P HN + A K G Q A+ + + L G
Sbjct: 219 -GNWREALKLCKKMTE-NGVGPDLVTHNIILSAY--KTGA------QYAKALSYFELMKG 268
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL--SVLRVCAKEGDV 348
I+ D + I ++ E+ + K M++ E +V+ S++ + + G +
Sbjct: 269 TNIRPDTTTLNIIIYCLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQI 328
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
E+ + ++ ++ M AYA G ++L +F ++ V +Y +
Sbjct: 329 ENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSL 388
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR 468
+ ++++ + + + +KP + SY + + Y + G+ +E +E R
Sbjct: 389 LNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGL-------LAEAVEVLR 441
Query: 469 --------PNRTIYGIYLESLKNAG---NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
PN L + NI+ + H I +NT + N + +Y
Sbjct: 442 EMEQDGIYPNAVSICTLLAACGRCSRKVNIDVVLQAAERRH----IKLNTIAYNSAIGSY 497
Query: 518 LSSGDFVKAEKIYDLM 533
++ G+F KA +Y M
Sbjct: 498 MNVGEFEKATSMYRSM 513
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 87/210 (41%), Gaps = 23/210 (10%)
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
+V+ VL + K DVE W+ N F ++ + G S+ +FR
Sbjct: 71 QVVQKVLELDHKSDDVEGLLNRWVGRFARKN------FPLLIKEITQKGSIEHSILVFRW 124
Query: 393 MQ-ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
M+ +R A Y+ +I L + T+ L E + KP + L N + G
Sbjct: 125 MKNQRNYCARTDIYNMMIRLHARHNWTDQARGLFFEMQKWRCKPDAETCNALINAHGRSG 184
Query: 452 --------MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTI 503
M D L A P+R+ Y + + ++GN +A ++ M ++ +
Sbjct: 185 QWRWAMNIMEDMLQKAIP-------PSRSTYNNLINACGSSGNWREALKLCKKM-TENGV 236
Query: 504 GVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G + + NIILSAY + + KA ++LM
Sbjct: 237 GPDLVTHNIILSAYKTGAQYAKALSYFELM 266
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 82/197 (41%), Gaps = 14/197 (7%)
Query: 362 DNGIP--TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
D G+ T F M+ K G+F ++ + M ER S Y+ +I LCK + +
Sbjct: 38 DRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVD 97
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE----KCRPNRTIYG 475
++L+ EFV +G P + +Y L + G R+ AF E C PN Y
Sbjct: 98 RAKTLVDEFVSSGFVPDVVTYSILADGLCKRG---RIDEAFELVKEMSGNGCTPNLVTYN 154
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM-- 533
++ L A EKA E+ + S + + + II+ G KA K+ + M
Sbjct: 155 TLIDGLCKASKTEKAYELLETLVSSGFVP-DVVTYTIIVDGLCKEGRLDKALKMVEGMLK 213
Query: 534 --CLKKYEIESAWMEKL 548
C +A ME L
Sbjct: 214 RGCTPSVITYTALMEGL 230
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 150/376 (39%), Gaps = 36/376 (9%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + K K K ++ +++++G P +TF+ ++ A G + A S+ M
Sbjct: 16 LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKA---GKFERAHSLLAVMA 72
Query: 246 QLGGYQPRPSLHNSLFRAL-----VSKPGGLSKYYLQQA---EFIFHNLLTSGL------ 291
+ +P +N+L L V + L ++ + + +++L GL
Sbjct: 73 ERN-CRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRI 131
Query: 292 ----EIQKDIYSG-----LIWLHSYQDNIDK----ERISLLKKEMQQAGFEEGKEVLLSV 338
E+ K++ L+ ++ D + K E+ L + + +GF +
Sbjct: 132 DEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTII 191
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
+ KEG ++ A K +L+ + ME + G ++ IF+EM +
Sbjct: 192 VDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 251
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
+A AY ++ CK+ T+ + ++ T P + Y L + Y G D +
Sbjct: 252 TADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPN 308
Query: 459 AFSE-CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
F + C PN Y I ++ L G +++A MHS + + S NII+
Sbjct: 309 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVP-DVVSYNIIIDGL 367
Query: 518 LSSGDFVKAEKIYDLM 533
+ +A ++ D M
Sbjct: 368 FKASKPKEARQVLDQM 383
>gi|255660928|gb|ACU25633.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 481
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/380 (19%), Positives = 161/380 (42%), Gaps = 25/380 (6%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E + + W+ + + + + K+ + +G+ K R I D+ +G E + +
Sbjct: 26 EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVL 85
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGG--LSKYYLQQ 278
+I +Y +G + E+ ++ +M +LG + S +++LF+ ++S+ G +SK Y
Sbjct: 86 MIDSYGK---EGIVQESVKLFQKMEELGVERTIKS-YDALFK-VISRRGRYMMSKRY--- 137
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSV 338
F+ ++ G+E + ++ LIW + E + ++++ ++
Sbjct: 138 ----FNKMVNEGIEPTRHTFNVLIWGFFLSGKV--ETANRFFEDLKSREITPDVVTYNTM 191
Query: 339 LRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
+ + +E+AEK +L + E + ++ YA I +L + EM+
Sbjct: 192 INGYTRVKKMEEAEKYFLEMKEKKIDPTVVTYTTLIKGYASIDRVDDALRLVEEMKGLGI 251
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS-YINLTNMYLNLGMHDRLH 457
+ Y ++ LC AE+ SL+KE V+ + P S +I L + G D
Sbjct: 252 KPNAITYSTLLPGLCDAEKMSEARSLLKEMVDKYIAPKDNSIFIRLISSQCKAGNLDAAA 311
Query: 458 LAFSECLEKCRPNRT-IYGIYLESLKNAGNIEKAEEIFNH-------MHSDQTIGVNTRS 509
+ P YG+ +E+ AG ++A ++F+ + T+ + +
Sbjct: 312 DVLKAMIRLSIPTEAGHYGVLIENYCKAGKYDQAVKLFDKLIEKDIILRPQSTLHMEPSA 371
Query: 510 CNIILSAYLSSGDFVKAEKI 529
N ++ ++G KAE +
Sbjct: 372 YNPLIEYLCNNGQTGKAETL 391
>gi|224089785|ref|XP_002308813.1| predicted protein [Populus trichocarpa]
gi|222854789|gb|EEE92336.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 12/175 (6%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D MG+ ++ + + + DII+ G PS +TF L+ AY A D+A IY M
Sbjct: 55 LLDAMGRAKRPWQVKKFYQDIIDNGLSPSFVTFAALLHAYGRARYG---DDAFKIYREMK 111
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ G L+NS+ A+ + G ++ +A IF ++ +SG++ +S +I +
Sbjct: 112 E-KGLGLNVVLYNSIL-AMCADLG-----HVDKAVEIFEDMKSSGIKPDSWTFSSMITIF 164
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
S + + +L EM +AGF+ +L S+++ K ++D KT+ R+ E
Sbjct: 165 SCCGKVSEVENTL--NEMFEAGFQPNIFILTSLIQCYGKAQRIDDVVKTFNRIFE 217
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 120/312 (38%), Gaps = 29/312 (9%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
PS TF I+ Y S+ G D+A ++ M + G +Q S N++ L
Sbjct: 122 PSPKTFAIVAERYASS---GKPDKAVKLFLNMHEHGCFQDLASF-NTILDVLCKSKRVEK 177
Query: 273 KYYLQQA-------EFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQ 325
Y L +A + + +N++ +G + K L L KEM
Sbjct: 178 AYELFRALRGRFSADTVTYNVIVNGWCLIKRTPKALEVL----------------KEMVD 221
Query: 326 AGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMK 385
G ++L+ + G + A + +L + + + I + + + GE +
Sbjct: 222 RGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKR 281
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+ +F EM SV Y+ I++LCK + E + +E V G +P + +Y L
Sbjct: 282 TRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIR 341
Query: 446 MYLNLGMHDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
+ G R E C PN Y + + +EKA +F M + +
Sbjct: 342 GLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGTGDCLP 401
Query: 505 VNTRSCNIILSA 516
N + NI++S
Sbjct: 402 -NLDTYNILISG 412
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 115/304 (37%), Gaps = 51/304 (16%)
Query: 179 DFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEAC 238
D A+ T L K + CR +F+ ++N+ + ++ +I G +EA
Sbjct: 261 DTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLI----AWNTMIGGLAEG---GYWEEAS 313
Query: 239 SIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIY 298
+YN+M Q G P + L A V+ L + I + +G +
Sbjct: 314 EVYNQM-QREGVMPNKITYVILLNACVNSAA------LHWGKEIHSRVAKAGFTSDIGVQ 366
Query: 299 SGLIWLHSYQDNIDKERISLLK-----------------------------KEMQQAGFE 329
+ LI ++S +I R+ K +EMQQAG E
Sbjct: 367 NALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVE 426
Query: 330 EGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSL 387
+ S+L C+ +E + +++E+ G+ T A V + Y+ G +
Sbjct: 427 PNRVTYTSILNACSSPAALEWGRRIHQQVVEA--GLATDAHVGNTLVNMYSMCGSVKDAR 484
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
++F M +R + AY+ +I + L E G+KP +YIN+ N
Sbjct: 485 QVFDRMIQR----DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNAC 540
Query: 448 LNLG 451
N G
Sbjct: 541 ANSG 544
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 18/242 (7%)
Query: 293 IQKDI--YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVED 350
IQ+DI Y+ +I ++ N+ KE + L + +Q+ G + K +++L CA G +E
Sbjct: 491 IQRDIVAYNAMIGGYAAH-NLGKEALKLFDR-LQEEGLKPDKVTYINMLNACANSGSLEW 548
Query: 351 AEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
A + + L G + V + YAK G F + +F +M +R +V +++ I
Sbjct: 549 ARE--IHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKR----NVISWNAI 602
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR 468
I + + L + G+KP + ++++L + + G+ + F +
Sbjct: 603 IGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFA 662
Query: 469 PNRTI--YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
TI YG ++ L AG +++AE + M NTR +L A G+ A
Sbjct: 663 IIPTIEHYGCMVDLLGRAGQLDEAEALIKTM----PFQANTRIWGALLGACRIHGNVPVA 718
Query: 527 EK 528
E+
Sbjct: 719 ER 720
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 101/510 (19%), Positives = 197/510 (38%), Gaps = 40/510 (7%)
Query: 158 RENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMT 217
R+ +T + +++ M+ Q D + + K R K + ++ G +P+ +T
Sbjct: 217 RQLDTAYHLFDQMLDQGLSP-DVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRIT 275
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQ 277
+ L+ Y S+ G ++A ++ RM + G +P +N+L L +
Sbjct: 276 HNSLLHGYCSS---GKPNDAIGVFKRMCR-DGVEPDVFTYNTLMGYLCKNGRSM------ 325
Query: 278 QAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLS 337
+A IF +++ G + Y L LH Y ++ L M + G + +
Sbjct: 326 EARKIFDSMVKRGHKPNSATYGTL--LHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNI 383
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIF-REMQER 396
++ K G V+DA + ++ T + M+A +G+ ++ F R + E
Sbjct: 384 LIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEG 443
Query: 397 LGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL 456
L +V + +I LC ++ + E L E + G+ P + L N GM R
Sbjct: 444 LTPDAV-VFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARA 502
Query: 457 HLAFSECLEKCRPNRTI--YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIIL 514
F + + + R + Y ++ G +++A ++ M D + N + N ++
Sbjct: 503 KNIF-DLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDG-VKPNEVTYNTMI 560
Query: 515 SAYLSSGDFVKAEKIYDLMCLKKYEIE-SAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRE 573
+ Y +G A ++ M K + L + R K + L + +
Sbjct: 561 NGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIK 620
Query: 574 NLIG---LLLGGLC---IESDEKR---KRHMIRFQFNENSRMHSVLRRYLYDQYHEWLHP 624
IG ++L GLC D R ++I F EN + ++ L H+
Sbjct: 621 FDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHL-ENRTFNIMIDALLKGGRHD---- 675
Query: 625 SFKFWPKGRLVIPKLIHRWLTPRALAYWFM 654
+ + + L+ R L P + YW M
Sbjct: 676 ------EAKDLFASLLARGLVPNVVTYWLM 699
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 164/411 (39%), Gaps = 29/411 (7%)
Query: 153 HCMRIRENETGFRVYEWMMQQHWYRF----DFALATKLADYMGKERKFAKCRDIFDDIIN 208
H + R + V+E M F D L D + K + + + + + +
Sbjct: 349 HLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRS 408
Query: 209 QGR-VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
Q R +P+ +T++ LI Y A + ++ A ++++M + G P N+L
Sbjct: 409 QPRCMPNTVTYNCLIDGYCKASM---IEAARELFDQMNK-DGVPPNVVTLNTLV------ 458
Query: 268 PGGLSKY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQA 326
G+ K+ + A F+ + GL+ Y+ LI +NI E+ L EM +A
Sbjct: 459 -DGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNI--EKAMELFDEMLEA 515
Query: 327 GFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKS 386
G V +++ ++ G ++ A ++ E+ +F + + + + ++
Sbjct: 516 GCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEA 575
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNM 446
E+ +EM+ Y+ +I K + LMK+ V+ G+ P + +Y L +
Sbjct: 576 YEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHA 635
Query: 447 YLNLGMHDRLHLAFSE--CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
Y G D F + K PN IY I + SL ++ A + + M + +
Sbjct: 636 YCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKV-KGVK 694
Query: 505 VNTRSCNIILSAYLSSGDFVKAEKIYDLM----CLKKY---EIESAWMEKL 548
NT + N + KA ++ D M C Y EI + W+ +
Sbjct: 695 PNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAV 745
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 164/392 (41%), Gaps = 42/392 (10%)
Query: 181 ALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSI 240
A L +G+ R+F + + ++ P+ +TF ILI +L + +DEA +
Sbjct: 306 ASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILI-NHLCKFRR--VDEALEV 362
Query: 241 YNRMI--QLGGYQPRPSL--HNSLFRALVSKPG------GLSKYYLQQA----EFIFHNL 286
+ +M + G+ P + +N+L L K G GL + Q + +N
Sbjct: 363 FEKMNGGESNGFLVEPDVITYNTLIDGLC-KVGRQEEGLGLVERMRSQPRCMPNTVTYNC 421
Query: 287 LTSG------LEIQKDIYS---------GLIWLHSYQDNIDKE-RIS---LLKKEMQQAG 327
L G +E ++++ ++ L++ D + K RI+ EMQ G
Sbjct: 422 LIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKG 481
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMK 385
+ +++R ++E A + + +LE+ G A VY + ++ G+ +
Sbjct: 482 LKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEA--GCSPDAIVYYTLISGLSQAGKLDR 539
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
+ + +M+E S + +++ +I C+ + + ++KE G+KP +Y L +
Sbjct: 540 ASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLIS 599
Query: 446 MYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
+ G H + + E P YG + + GN+++A +IF M S +
Sbjct: 600 HFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVP 659
Query: 505 VNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
NT NI++++ A + D M +K
Sbjct: 660 PNTVIYNILINSLCRKNQVDLALSLMDDMKVK 691
>gi|255660914|gb|ACU25626.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 481
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/392 (18%), Positives = 165/392 (42%), Gaps = 25/392 (6%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
Y +H + E+ F + W+ + + + D K+ + +G+ K R I D+
Sbjct: 15 VYNVLHAAKTSEHALQF--FRWVERSNLFEHDRETHLKIIEILGRASKLNHARCILLDMP 72
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
+G E + ++I +Y A G + E+ ++ +M +LG + S +++LF+ +
Sbjct: 73 KKGLEWDEDMWVLMIDSYGKA---GIVQESVKLFQKMEELGVERTIKS-YDALFKVI--- 125
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
+ + A+ F+ +L+ G+E + ++ +IW +D ++M+
Sbjct: 126 ---MRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKMDTAMRFF--EDMKSRE 180
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKS 386
+++ C + +++AEK ++ + + N PT + ++ Y + + +
Sbjct: 181 ISPDVVTYNTMINGCYRVKKMDEAEKYFVEM-KGKNIEPTVVTYTTLIKGYVSVDQVHDA 239
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS-YINLTN 445
L + EM+ + Y ++ LC A + +S++KE V+ + P S ++ L +
Sbjct: 240 LRLVEEMKGYGIKPNAITYSTLLPGLCNAGKMSEAQSILKEMVDKYIAPKDNSIFMRLIS 299
Query: 446 MYLNLGMHDRLHLAFSECLEKCRPNRT-IYGIYLESLKNAGNIEKAEEIFNH-------M 497
G D + P YG+ +E+ AG ++A ++ + +
Sbjct: 300 SQCEAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDRAVKLLDKLIEKDIIL 359
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
T+ + + N ++ S+G KAE +
Sbjct: 360 RPQSTLHMEPSAYNPMIEYLCSNGQTAKAEAL 391
>gi|255660906|gb|ACU25622.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 484
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/392 (18%), Positives = 169/392 (43%), Gaps = 25/392 (6%)
Query: 148 TYLAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDII 207
Y +H + E+ F + W+ + + + + K+ + +G+ K R I DI
Sbjct: 15 VYNVLHSAKTSEHALQF--FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDIP 72
Query: 208 NQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK 267
+G E + ++I +Y +G + E+ ++ +M +LG + S +N+LF+ ++ +
Sbjct: 73 KKGLEWDEDMWVMMIDSYGK---EGIVQESVKMFQKMEELGVERTIKS-YNALFKVILRR 128
Query: 268 PGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAG 327
+Y + A+ F+ +L+ G+E + ++ +IW + E + ++M+
Sbjct: 129 ----GRYMM--AKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV--ETANRFFEDMKSRE 180
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKS 386
+++ + +E+AEK ++ + + N PT + ++ Y + + +
Sbjct: 181 ISPDVVTYNTIINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVDQVDDA 239
Query: 387 LEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS-YINLTN 445
L + EM+ + Y ++ LC AE+ S++KE ++ + P S ++ L +
Sbjct: 240 LRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLIS 299
Query: 446 MYLNLGMHDRLHLAFSECLEKCRPNRT-IYGIYLESLKNAGNIEKAEEIFNH-------M 497
N G D + P YG+ +E+ AG ++A ++ + +
Sbjct: 300 SQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIIL 359
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
T+ + + N ++ ++G KAE +
Sbjct: 360 RPQSTLHLEPSAYNPMIEYLCNNGQAAKAEAL 391
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+E + K K+ EIFREM + Y ++++LCKA + ++ E T
Sbjct: 166 LEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVC 225
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK----CRPNRTIYGIYLESLKNAGNIEK 489
KP Y L + Y G+ +R+ A S LE P+ +Y + + A ++
Sbjct: 226 KPTPFIYSVLVHTY---GIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKN 282
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+ N M + + N+R+ NIILS+ + G+ +A +++
Sbjct: 283 VYRVLNEMDC-KGVTPNSRTFNIILSSLIGRGETDEAYRVF 322
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 149/369 (40%), Gaps = 23/369 (6%)
Query: 162 TGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHIL 221
+R +EW +Q Y + D + K R++ D+ ++ R+ + TF I+
Sbjct: 38 VAYRFFEWAEKQRHYNHSVKAFHTVIDSLAKIRQYQLMWDVVK-VMKSKRMVNVETFCII 96
Query: 222 IVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSL--HNSLFRALVSKPGGLSKYYLQQA 279
+ Y A ++EA +N M Y P+L N L AL +++A
Sbjct: 97 MRKYARAQK---VEEAVYTFNIM---DKYDVPPNLAAFNGLLSALCKSKN------VRKA 144
Query: 280 EFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVL 339
+ IF ++ + K YS L+ N+ K R + +EM G ++
Sbjct: 145 QEIFDSIKDRFVPDSK-TYSILLEGWGKDPNLPKAR--EIFREMVSNGCRPDIVTYGIMV 201
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERL 397
V K G V++A + ++S PTP F+Y + Y ++ F EM+
Sbjct: 202 DVLCKAGRVDEALGI-VNEMDSTVCKPTP-FIYSVLVHTYGIENRIEDAVSTFLEMENNG 259
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
V Y+ +I CKA + ++ E G+ P ++ + + + G D +
Sbjct: 260 IEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEAY 319
Query: 458 LAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
F ++ C P+ Y + ++ ++KA +++ +M + + + + ++++
Sbjct: 320 RVFLRMIKVCEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMP-SMHTFQVLINGL 378
Query: 518 LSSGDFVKA 526
GD +A
Sbjct: 379 CEKGDVTQA 387
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 129/336 (38%), Gaps = 55/336 (16%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+F ++ +G P +TF LI Y A G + +A ++N MIQ G
Sbjct: 851 LFHEMFCKGLEPDSVTFTELINGYCKA---GHMKDAFRVHNHMIQAGC------------ 895
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
+ + L GL + D+ S LH
Sbjct: 896 ----------------SPNVVTYTTLIDGLCKEGDLDSANELLH---------------- 923
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
EM + G + S++ K G++E+A K + T + M+AY K G
Sbjct: 924 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 983
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
E K+ EI +EM + ++ ++ ++ C E E L+ + G+ P ++
Sbjct: 984 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 1043
Query: 442 NLTNMYLNLGMHDRLHLAFS----ECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+L Y + + L A + C P+ Y ++ A N+++A +F M
Sbjct: 1044 SLVKQYC---IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 1100
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ V+ + ++++ +L F++A +++D M
Sbjct: 1101 KG-KGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 1135
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 85/214 (39%), Gaps = 2/214 (0%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
EM G E ++ K G ++DA + ++++ + ++ K G
Sbjct: 854 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 913
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ + E+ EM + ++ Y+ I+ LCK+ E L+ EF G+ +Y
Sbjct: 914 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 973
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
L + Y G D+ E L K +P + + + G +E E++ N M +
Sbjct: 974 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA- 1032
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
+ I N + N ++ Y + A IY MC
Sbjct: 1033 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 1066
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 88/209 (42%), Gaps = 2/209 (0%)
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
EM + G V +++ K GD+ A K + + D + + + +IG
Sbjct: 784 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 843
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ +++ ++F EM + + ++I CKA + + ++ G P + +Y
Sbjct: 844 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 903
Query: 442 NLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
L + G D + E + +PN Y + L +GNIE+A ++ +
Sbjct: 904 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA- 962
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKI 529
+ +T + ++ AY SG+ KA++I
Sbjct: 963 AGLNADTVTYTTLMDAYCKSGEMDKAQEI 991
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 94/216 (43%), Gaps = 6/216 (2%)
Query: 378 AKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLM 437
++G ++ + M+ + + V +Y ++ C+ E + L++ G+KP
Sbjct: 700 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 759
Query: 438 PSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
Y ++ + + AFSE + + P+ +Y ++ G+I A + F
Sbjct: 760 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 819
Query: 497 MHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKL--DYVLSL 554
MHS + I + + I+S + GD V+A K++ M K E +S +L Y +
Sbjct: 820 MHS-RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 878
Query: 555 NRKEVKKPVSLNLSSEQRENLI--GLLLGGLCIESD 588
+ K+ + + + + N++ L+ GLC E D
Sbjct: 879 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 914
>gi|302143554|emb|CBI22115.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 26/282 (9%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
+ F++++ M +++ R F + L D MGK + ++ ++ G PS +
Sbjct: 249 DAAFKLFQEMKEKNL-RPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVS 307
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
LI +++ A G L+ A I++ M + G++P L+ + + +K G L + A
Sbjct: 308 LIESFVKA---GKLETALRIWDEM-KKAGFRPNYGLYTMVVESH-AKSGKL-----ETAM 357
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+F ++ +G YS L+ +HS +D L M AG G ++L
Sbjct: 358 SVFSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAM--KLYNSMTNAGLRPGLSTYTALLT 415
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSA 400
+ A + V+ A K L + + A M Y K G +L R M GS+
Sbjct: 416 LLANKKLVDVAAKVLLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFM----GSS 470
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
+ + II +L ES MK + KPL+ +Y+N
Sbjct: 471 GIRTNNFIIR--------QLFESCMKNGLYESAKPLLETYVN 504
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 91/224 (40%), Gaps = 5/224 (2%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
L+ A F + SG +I Y+ LI L + + + + + M+ AG
Sbjct: 178 LEVAFCCFKKVQDSGCKIDTATYNSLITL--FLNKGLPYKAFEVYESMEAAGCLLDGSTY 235
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
++ AK G ++ A K + + E + F +++ K G S++++ EMQ
Sbjct: 236 ELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQG 295
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
S Y +IE KA + E + E + G +P Y + + G +
Sbjct: 296 FGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLET 355
Query: 456 LHLAFSECLEKCR--PNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
FS+ +EK P + Y LE +G ++ A +++N M
Sbjct: 356 AMSVFSD-MEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSM 398
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 373 KMEAYAKIGEFMKSLEIFREMQERL------GSASVPAYHKIIELLCKAEETELTESLMK 426
K+ + +++L+I + L G +SV A ++++ L KAE+ E+ K
Sbjct: 127 KLHFVPNMSHVIQALKIVTDTDASLNSGDNNGVSSVIACNQVVRDLAKAEKLEVAFCCFK 186
Query: 427 EFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNA 484
+ ++G K +Y +L ++LN G+ + + E +E C + + Y + + SL +
Sbjct: 187 KVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVY-ESMEAAGCLLDGSTYELMIPSLAKS 245
Query: 485 GNIEKAEEIFNHM 497
G ++ A ++F M
Sbjct: 246 GRLDAAFKLFQEM 258
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 97/209 (46%), Gaps = 12/209 (5%)
Query: 294 QKDIYSGLIWLHSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
+KD+ S + Y Q+++ E ++L + EMQ +GF+ + L+SV+ CA+ +E +
Sbjct: 335 EKDVVSWSSMISGYAQNDLFDETLALFQ-EMQMSGFKPDETTLVSVISACARLAALEQGK 393
Query: 353 KTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
W+ NG+ + ++ Y K G +LE+F M E+ + ++ +I
Sbjct: 394 --WVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEK----GISTWNALIL 447
Query: 411 LLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL--EKCR 468
L E + + + + P +++ + ++G+ D F + K +
Sbjct: 448 GLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQ 507
Query: 469 PNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
PN YG ++ L AG +++AEE+ N M
Sbjct: 508 PNVKHYGCMVDLLGRAGKLQEAEELLNRM 536
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 130/303 (42%), Gaps = 16/303 (5%)
Query: 248 GGYQPRPSLHNSLFRALVSKPG---GLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWL 304
GG P +N++ K G L+ + +A + + ++ +G+ Y+ + L
Sbjct: 195 GGSPPDVVSYNTVLNGFF-KEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSI--L 251
Query: 305 HSY-QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
H Y KE I LKK M+ G E S++ K G +A K + + +
Sbjct: 252 HGYCSSGQPKEAIGTLKK-MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM--TKR 308
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLG-SASVPAYHKIIELLCKAEETEL 420
G+ Y+ ++ + K G ++S ++F ++ R+G + Y+ +I+ C A + +
Sbjct: 309 GLEPDIATYRTLLQGHCKEGRVIESEKLF-DLMVRIGVKPDIITYNTLIDGCCLAGKMDE 367
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLE 479
L+ V G+KP + +Y L N Y + D F E + PN Y I L+
Sbjct: 368 ATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 427
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
L + A+E++ + T + + NIIL + +A +++ +CL +
Sbjct: 428 GLFHTRRTAAAKELYVSITKSGT-QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 486
Query: 540 IES 542
+E+
Sbjct: 487 LET 489
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 93/439 (21%), Positives = 174/439 (39%), Gaps = 75/439 (17%)
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRAL-----VSKPGGLSKYYLQ---QAEFIFHN 285
+ +A ++ ++M+++G Y+P +L L S+ L +Q Q + + +
Sbjct: 169 ISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 286 LLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKE 345
+ +GL + DI L SLLKK M++ E + +++ K
Sbjct: 228 TVVNGLCKRGDIDLAL---------------SLLKK-MEKGKIEADVVIYNTIIDGLCKY 271
Query: 346 GDVEDAEKTWLRLLESDN-GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASV 402
++DA + E DN GI F Y + G + + + +M ER + +V
Sbjct: 272 KHMDDALNLFT---EMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA--- 459
+ +I+ K + E L E ++ + P + +Y +L N + MHDRL A
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC---MHDRLDEAKHM 385
Query: 460 FSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
F + K C PN Y ++ A +E+ E+F M +G NT + ++ +
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYTTLIHGFF 444
Query: 519 SSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIGL 578
+ D A+ ++ ++ V V N+ + +
Sbjct: 445 QARDCDNAQMVF-------------------------KQMVSVGVHPNILTYN------I 473
Query: 579 LLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEWLHPSFKFWPKGRLVIPK 638
LL GLC + K + M+ F++ + S M + Y Y+ E + + K G +
Sbjct: 474 LLDGLC--KNGKLAKAMVVFEYLQRSTMEPDI--YTYNIMIEGMCKAGKV-EDGWELFCN 528
Query: 639 LIHRWLTPRALAYWFMYGG 657
L + ++P +AY M G
Sbjct: 529 LSLKGVSPNVIAYNTMISG 547
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 149/369 (40%), Gaps = 25/369 (6%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
M + Y+ D T L + K ++ + D ++ +G P +T+ ++
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK--- 235
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY-YLQQAEFIFHNLLTS 289
+G +D A S+ +M + G + ++N++ GL KY ++ A +F +
Sbjct: 236 RGDIDLALSLLKKM-EKGKIEADVVIYNTII-------DGLCKYKHMDDALNLFTEMDNK 287
Query: 290 GLEIQKDIYSGLI-WLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDV 348
G+ YS LI L +Y D R L +M + +++ KEG +
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASR---LLSDMIERKINPNVVTFSALIDAFVKEGKL 344
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYH 406
+AEK + +++ I F Y + + ++ +F M + +V Y
Sbjct: 345 VEAEKLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYS 402
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE- 465
+I+ CKA+ E L +E + G+ +Y L + + D + F + +
Sbjct: 403 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 462
Query: 466 KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVK 525
PN Y I L+ L G + KA +F ++ T+ + + NI++ +G K
Sbjct: 463 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR-STMEPDIYTYNIMIEGMCKAG---K 518
Query: 526 AEKIYDLMC 534
E ++L C
Sbjct: 519 VEDGWELFC 527
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 104/268 (38%), Gaps = 12/268 (4%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
+ L D KE K + ++D++I + P T+ LI + + LDEA ++
Sbjct: 332 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC---MHDRLDEAKHMFEL 388
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
MI + P +++L + G +++ +F + GL Y+ LI
Sbjct: 389 MISKDCF-PNVVTYSTLIK------GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI- 440
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
H + D + ++ K+M G +L K G + A + L S
Sbjct: 441 -HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
+ +E K G+ E+F + + S +V AY+ +I C+ E +S
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLG 451
L+K+ E G P +Y L L G
Sbjct: 560 LLKKMKEDGPLPNSGTYNTLIRARLRDG 587
>gi|414883803|tpg|DAA59817.1| TPA: hypothetical protein ZEAMMB73_625576 [Zea mays]
Length = 350
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 105/265 (39%), Gaps = 13/265 (4%)
Query: 240 IYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYS 299
++ RM +LG Y P +N+L + L ++ K + E + H G D+ S
Sbjct: 87 VFRRMPELG-YTPDVFSYNALIKGLCAE-----KKSQEALELLLHMTANGGYNCSPDVVS 140
Query: 300 GLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLL 359
I + + ++ L EM GF SV+ K ++ AE + ++L
Sbjct: 141 YNIVIDGLFKEGEVDKAYFLFHEMPGQGFPPDLVTYSSVIDGLCKAQAMDKAEASLQQML 200
Query: 360 ESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETE 419
T + + Y +G+ ++++ + ++M +V Y+ +I+ CK
Sbjct: 201 YKGVMPNTRPYNSLIHGYCSLGQLVEAVRLLKKMSGGGLQLNVVTYNMLIDYYCKIGRCA 260
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLG----MHDRLHLAFSECLEKCRPNRTIYG 475
S+ V G KP +Y +L + Y G MHD L L + + ++
Sbjct: 261 EARSIFDSMVRRGQKPNATTYCSLLHGYATKGALVDMHDLLDLMIRDGIPI---EHRVFN 317
Query: 476 IYLESLKNAGNIEKAEEIFNHMHSD 500
I + + ++KA +F M +
Sbjct: 318 ILIYAYAKHETVDKAMAVFAEMRQN 342
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 5/197 (2%)
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
K GE K+ +F EM + + Y +I+ LCKA+ + E+ +++ + G+ P
Sbjct: 150 KEGEVDKAYFLFHEMPGQGFPPDLVTYSSVIDGLCKAQAMDKAEASLQQMLYKGVMPNTR 209
Query: 439 SYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
Y +L + Y +LG + + + L + N Y + ++ G +A IF+ M
Sbjct: 210 PYNSLIHGYCSLGQLVEAVRLLKKMSGGGLQLNVVTYNMLIDYYCKIGRCAEARSIFDSM 269
Query: 498 HSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSLNRK 557
T C+ +L Y + G V + DLM IE L Y + +
Sbjct: 270 VRRGQKPNATTYCS-LLHGYATKGALVDMHDLLDLMIRDGIPIEHRVFNILIYAYA-KHE 327
Query: 558 EVKKPVSLNLSSEQREN 574
V K ++ + +E R+N
Sbjct: 328 TVDK--AMAVFAEMRQN 342
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 140/340 (41%), Gaps = 18/340 (5%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
V + +Q+ Y D T L + KE + + D++ N+G P +T+++LI
Sbjct: 178 AMEVLDRQLQKECYP-DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLI 236
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
+G LDEA N M G QP HN + R++ S + AE +
Sbjct: 237 NGICK---EGRLDEAIKFLNNMPSYG-CQPNVITHNIILRSMCSTGRWM------DAEKL 286
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
++L G ++ LI Q + + I +L+K M G +L
Sbjct: 287 LSDMLRKGCSPSVVTFNILINFLCRQGLLGRA-IDILEK-MPMHGCTPNSLSYNPLLHGF 344
Query: 343 AKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSAS 401
KE ++ A + +L ++ S P + + A K G+ ++EI ++ + S
Sbjct: 345 CKEKKMDRAIE-YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV 403
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
+ Y+ +I+ L K +TE L+ E G+KP + +Y +L + G D + F
Sbjct: 404 LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE-AIKFF 462
Query: 462 ECLE--KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
LE RPN Y + L + ++A + +M S
Sbjct: 463 HDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMIS 502
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 146/381 (38%), Gaps = 59/381 (15%)
Query: 155 MRIRENETGFRVYEWMMQQHWYRFDFA---LATKLADYMGKERKFAKCRDIFDDIINQGR 211
+R E E GF+ E M+ YR D T L + K K + + + G
Sbjct: 68 VRNGELEDGFKFLESMV----YRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 212 VPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL 271
VP +T+++LI Y + G +D A + +RM P +N++ R L
Sbjct: 124 VPDVITYNVLISGYCKS---GEIDNALQVLDRM----NVAPDVVTYNTILRTLCDSG--- 173
Query: 272 SKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKE----RISLLKKEMQQAG 327
L+QA + ++QK+ Y +I + KE + L EM+ G
Sbjct: 174 ---KLKQAMEVLDR------QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKG 224
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT----PAFVYK---MEAYAKI 380
+ ++ KEG +++A K N +P+ P + + +
Sbjct: 225 SKPDVVTYNVLINGICKEGRLDEAIKFL-------NNMPSYGCQPNVITHNIILRSMCST 277
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G +M + ++ +M + S SV ++ +I LC+ ++++ G P SY
Sbjct: 278 GRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSY 337
Query: 441 INLTNMYLNLGMHDR----LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNH 496
L + + DR L + S C P+ Y L +L G ++ A EI N
Sbjct: 338 NPLLHGFCKEKKMDRAIEYLDIMVS---RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 394
Query: 497 MHSDQTIGVNTRSCNIILSAY 517
+ S + C+ +L Y
Sbjct: 395 LSS--------KGCSPVLITY 407
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 148/376 (39%), Gaps = 32/376 (8%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D KE + K ++F+++ N G +P ++ ILI + +G +D A + M
Sbjct: 356 LIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCR---KGDMDSAIKFWEEMT 412
Query: 246 QLGGYQPRPSLHNSLFRALVSK---PGGLSKYYLQQ-----AEFIFHNLLTSGLEIQKDI 297
+ P + SL + L ++ + Q + I N + S + D
Sbjct: 413 S-NNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDF 471
Query: 298 YSGLIWLHSYQDN------------IDK-ERISLLKKEMQQAGFEEGKEVL-----LSVL 339
L +Q+N I + R S+ +K +Q + VL S L
Sbjct: 472 NKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTL 531
Query: 340 RVC-AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLG 398
C AK + E A ++++ + + + + + + +F+ M+E
Sbjct: 532 ISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRV 591
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
AY ++ C E +L E G P + +Y N YL L +++ H
Sbjct: 592 YPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHK 651
Query: 459 AFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
+ + E+ P++ +Y + + + N G + +AE +F+ M + N ++++Y
Sbjct: 652 LYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSY 711
Query: 518 LSSGDFVKAEKIYDLM 533
+ +AEK+Y+ M
Sbjct: 712 IKLNKRDQAEKLYEEM 727
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 81/204 (39%), Gaps = 4/204 (1%)
Query: 298 YSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLR 357
YS LI + ++ E+ +L +M + G + ++ + + ++ A + +
Sbjct: 528 YSTLI--SCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKG 585
Query: 358 LLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEE 417
+ ES A+ + + GE ++ +F EM S +V Y I K +
Sbjct: 586 MKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNK 645
Query: 418 TELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE--KCRPNRTIYG 475
L ++ E G+ P Y L + N G +R F E + +C PN +Y
Sbjct: 646 NNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYT 705
Query: 476 IYLESLKNAGNIEKAEEIFNHMHS 499
+ S ++AE+++ M +
Sbjct: 706 CLINSYIKLNKRDQAEKLYEEMRA 729
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 2/161 (1%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
++ K+G F + + + + + + ++ +I LC+ + + KE +G+
Sbjct: 252 IKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGI 311
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEE 492
P + SY L + + G D+ F E PN Y I ++ G ++KA E
Sbjct: 312 LPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALE 371
Query: 493 IFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+F M + I + S +I++ + GD A K ++ M
Sbjct: 372 VFEEM-KNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEM 411
Score = 39.3 bits (90), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 2/147 (1%)
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
E+F+EM+ V +Y +I+ C+ + + KE +G+ P + SY L + +
Sbjct: 301 EVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGF 360
Query: 448 LNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN 506
G D+ F E P+ Y I ++ G+++ A + + M S+
Sbjct: 361 CKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSA 420
Query: 507 TRSCNIILSAYLSSGDFVKAEKIYDLM 533
C++I Y S F A K + +M
Sbjct: 421 FNYCSLI-KGYYKSKQFANALKEFRIM 446
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 99/495 (20%), Positives = 194/495 (39%), Gaps = 48/495 (9%)
Query: 156 RIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGR--VP 213
R+R+ R+Y M R D L + + K + + D + Q P
Sbjct: 148 RVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRP 207
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACS-IYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
+T + ++ + G + EA + + RM + G P +N L A + G +S
Sbjct: 208 DVVTLNTVVDGLCKS---GRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFC-RVGNIS 263
Query: 273 KYY----LQQAEFIFHNLLT---------------SGLEIQKD-------------IYSG 300
Y + E + N++T + LE ++ YS
Sbjct: 264 MAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYST 323
Query: 301 LIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
L+ + +N+ + L ++M + G + +++ + G +EDA + E
Sbjct: 324 LVGALLHTNNVGMA-MELFHEKMSE-GHSPDAIMYFTMISGLTQAGRLEDACSMASSMKE 381
Query: 361 SDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
+ + T A+ + + + ++ E+ +EM+E V Y+ ++ CKA +
Sbjct: 382 AGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAA 441
Query: 421 TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTIYGIYLE 479
+ L+ + ++ G +P + ++ L + Y +G D L + S PN IY ++
Sbjct: 442 VDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLID 501
Query: 480 SLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM----CL 535
L G+++ A E+F+ M ++++ N + N +L KA ++ D M C
Sbjct: 502 FLCKRGDVDLAIELFDEMK-EKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCF 560
Query: 536 KKYEIESAWMEKLDYV-LSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRH 594
Y ME L + L N + K V+ + +S +R+ ++ G S+ R
Sbjct: 561 PDYVTVDVLMEWLPVIELQGNNCQGKLCVAEDGASGERKAVLNRQQAGSTEPSNGGRVLP 620
Query: 595 MIRFQFNENSRMHSV 609
ENS M +V
Sbjct: 621 RSCGLGGENSEMEAV 635
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 150/345 (43%), Gaps = 14/345 (4%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG 249
M K+++ +F ++ ++G P+ TF+ILI V+G L +A ++ +M + G
Sbjct: 959 MVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLC---VEGNLKKAGNLLKQM-EENG 1014
Query: 250 YQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQD 309
+ P +N+L K G K ++ ++ ++ G+E D+ + +++ +
Sbjct: 1015 FVPTIVTYNTLLNWYCKK--GRYKAAIELIDY----MICKGIE--ADVCTYNVFIDNLCT 1066
Query: 310 NIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPA 369
N + LL K+M++ + +++ KEG + A + + + + D
Sbjct: 1067 NHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVT 1126
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
+ + + +G+F ++L + M+ + Y ++ LCK E+ EL + L++
Sbjct: 1127 YNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 1186
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDR-LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIE 488
M +Y L + GM D + L + + P+ Y + GNI+
Sbjct: 1187 VNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIK 1246
Query: 489 KAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
A+EI M+ + +N + ++ + G+ +A K+Y +M
Sbjct: 1247 SAKEIICRMYRSGLV-LNKIIYSTLIYNFCQHGNVTEAMKVYAVM 1290
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 12/197 (6%)
Query: 343 AKEGDVEDAEKTWLRLLESD---NGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
+ G+++ A++ R+ S N I +Y + + E MK ++ M
Sbjct: 1240 CRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMK---VYAVMNCNGHG 1296
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH-L 458
A + ++ LC+ + E + G+ P +Y + N Y ++G D L+
Sbjct: 1297 ADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIG--DPLNAF 1354
Query: 459 AFSECLEKC--RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
+F + + KC P+ YG L+ L GN+ +A++ N +H V++ N +L+
Sbjct: 1355 SFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPG-AVDSVMYNTLLAE 1413
Query: 517 YLSSGDFVKAEKIYDLM 533
SG+ +A ++D M
Sbjct: 1414 TCKSGNLHEAVALFDKM 1430
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 92/235 (39%), Gaps = 43/235 (18%)
Query: 338 VLRVCAKEGDVEDAEKTW--LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
++RV KEG ++ A +T+ + L+ + T + K E + SL FREM +
Sbjct: 920 LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSL--FREMSD 977
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL------- 448
+ +V ++ +I LC + +L+K+ E G P + +Y L N Y
Sbjct: 978 KGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKA 1037
Query: 449 -------------------------NLGMHDRLHLAFSECLEKCR-----PNRTIYGIYL 478
NL + R A+ L+K R PN Y +
Sbjct: 1038 AIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAY-LLLKKMRKEMISPNEVTYNTLI 1096
Query: 479 ESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
G I A ++FN M S + N + N ++ + GDF +A ++ D M
Sbjct: 1097 NGFVKEGKIGVAAQVFNEM-SKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 1150
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 133/313 (42%), Gaps = 14/313 (4%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + + + + + D++ + P +T++ILI A +G + EA + M+
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK---EGRILEALGVLVMMM 432
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ G +P +N++ G + + A+ IF+ ++ SGLE Y+ LI +
Sbjct: 433 K-KGVKPNIVTYNAMMD------GYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGY 485
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
+ +D+ + L KEM+ S++ G + ++ + +S
Sbjct: 486 CKTEMVDEAIV--LFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSP 543
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
+ ++A+ K F K++ +FR++ E + H I++ LCK E+ ++ E +
Sbjct: 544 DVITYNILLDAFCKTQPFDKAISLFRQIVEGIW-PDFYTNHAIVDNLCKGEKLKMAEDAL 602
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI-YGIYLESLKNA 484
K + G P + +Y L N G L S+ + RP I + I + L
Sbjct: 603 KHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQR 662
Query: 485 GNIEKAEEIFNHM 497
+KAE++ M
Sbjct: 663 NETDKAEKLREEM 675
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 68/370 (18%), Positives = 147/370 (39%), Gaps = 39/370 (10%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
MM + + D L + + R++F+ ++ +G P + +++LI Y
Sbjct: 290 MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK 349
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY---------YLQQAE 280
+ +DEA ++ + P + +NSL L + G +S Q +
Sbjct: 350 M---VDEAMVLFKELCN-KNLVPTIASYNSLIDGLCNS-GRISHVKKLLDEMHGSAQPPD 404
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ +N+L L + I L L + ++KK G + +++
Sbjct: 405 VVTYNILIDALCKEGRILEALGVL-----------VMMMKK-----GVKPNIVTYNAMMD 448
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLG 398
+V A+ + R+++S G+ Y + Y K +++ +F+EM+ +
Sbjct: 449 GYCLRNNVNVAKDIFNRMVKS--GLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506
Query: 399 SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHL 458
+ +Y+ +I+ LC + L+ E ++G P + +Y L + + D+
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566
Query: 459 AFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNH--MHSDQTIGVNTRSCNIILSA 516
F + +E P+ +++L ++ AE+ H MH N ++ I+++A
Sbjct: 567 LFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHG---CSPNVQTYTILINA 623
Query: 517 YLSSGDFVKA 526
G F +A
Sbjct: 624 LCKDGSFGEA 633
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 76/192 (39%), Gaps = 2/192 (1%)
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASV 402
KEG + +A+ + + + ME Y ++ E+F M +R V
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335
Query: 403 PAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSE 462
Y+ +I+ CK + + L KE + P + SY +L + N G + E
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395
Query: 463 CLEKCRPNRTI-YGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
+P + Y I +++L G I +A + M + + N + N ++ Y
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK-KGVKPNIVTYNAMMDGYCLRN 454
Query: 522 DFVKAEKIYDLM 533
+ A+ I++ M
Sbjct: 455 NVNVAKDIFNRM 466
>gi|242074484|ref|XP_002447178.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
gi|241938361|gb|EES11506.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
Length = 643
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 151/363 (41%), Gaps = 38/363 (10%)
Query: 210 GRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSK-- 267
G PS +T++ L+ ++A G LD A ++++ M +P +N L +
Sbjct: 202 GVEPSRLTYNCLLDGLVNA---GLLDTAINVFDAMSTEDRVRPDVVSYNILIKGYCRAGR 258
Query: 268 -PGGLSKY--YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQ 324
G+S+ +QAE L K Y L+ H Y + + I+L + EM+
Sbjct: 259 TQDGMSRLADLREQAE----------LAPDKVTYLTLMQRH-YSEGTFPQCIALFQ-EME 306
Query: 325 QAGFEEGKEV----LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYA 378
+ G GKE+ + V+ +K+G +A + R+L+ G P A +Y +++
Sbjct: 307 ERGM--GKEIPQHAYVLVIGALSKDGKPFEALAVFERMLK--RGCPANAAMYTALIDSMG 362
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
K+G +++ +F M+ Y I+ LC+ E S + VE G+
Sbjct: 363 KLGREKEAMALFERMKASGIELDAVTYGVIVNCLCRFGNMEEALSCFRSCVEKGVAVNAI 422
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
Y +L + + GM D+ F E + K P+ Y + +++L AG + A + M
Sbjct: 423 FYTSLIDGFGKTGMVDQAKELFEEMIAKGFVPDSYCYNVLIDALVKAGRTDIACAFYERM 482
Query: 498 H---SDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYVLSL 554
DQT+ T I++ +A K +D M K +A L L L
Sbjct: 483 EDDGCDQTVYTYT----ILIDGLFKEHKNEEALKFWDSMIDKGITPTAAAFRVLANGLCL 538
Query: 555 NRK 557
+ K
Sbjct: 539 SGK 541
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L D GK + +++F+++I +G VP +++LI A + A G D AC+ Y R
Sbjct: 425 TSLIDGFGKTGMVDQAKELFEEMIAKGFVPDSYCYNVLIDALVKA---GRTDIACAFYER 481
Query: 244 M 244
M
Sbjct: 482 M 482
>gi|302782902|ref|XP_002973224.1| hypothetical protein SELMODRAFT_98955 [Selaginella moellendorffii]
gi|300158977|gb|EFJ25598.1| hypothetical protein SELMODRAFT_98955 [Selaginella moellendorffii]
Length = 546
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 121/304 (39%), Gaps = 25/304 (8%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
++ ++ G P T H+ ++ S+ G L+E I+ RM G +P L S
Sbjct: 199 LYKEMDVHGAEPDTFT-HVCLLGACSS--LGALEEGERIHARM----GDKP-DGLAGSAI 250
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
A+ +K GG+ + A F + +S + + + +G + +Q+ +D L
Sbjct: 251 VAMYAKCGGI-----EHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQEALD------LYH 299
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
M G E SVL C+ D+ + R++ + P + +AK G
Sbjct: 300 AMNLEGLEADIYTFSSVLGACSGAKDLSEGRAVHARIVSGGLEVVVPLQNGLVNMFAKCG 359
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+LE+FR M R + +++ ++ C+ E L KE + G +P ++
Sbjct: 360 SLTLALEMFRGMASR----NTVSWNSMVTAFCQHGEGGGAFELFKEMLLEGAEPHEQTFT 415
Query: 442 NLTNMYLNLG-MHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
++ N + G + D F E P Y ++ L G+I AE++ H
Sbjct: 416 SILNFCSHSGLLQDGFGYFFDMVDEFGIAPVDEHYRCVIDLLGRTGHIAAAEKMVEHAFP 475
Query: 500 DQTI 503
I
Sbjct: 476 GSVI 479
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 133/306 (43%), Gaps = 31/306 (10%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ D ++ +G P T++ ++ LS G LDEA I N+M+ G P + N+L
Sbjct: 324 VMDLMLQEGHDPDVFTYNT-VINCLSK--NGELDEAKGIVNQMVDRGCL-PDTTTFNTLI 379
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
AL S+ L++A + L GL D+Y+ I +++ D L +
Sbjct: 380 VALSSQ------NRLEEALDLARELTVKGL--SPDVYTFNILINALCKVGDPHLGIRLFE 431
Query: 322 EMQQAGF---EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEA 376
EM+ +G E +L+ L K G+ D L +ES NG P Y ++A
Sbjct: 432 EMKSSGCTPDEVTYNILIDHLCSMGKLGNALD----LLNEMES-NGCPRSTVTYNTIIDA 486
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
K ++ E+F +M + S S ++ +I+ LCKA+ + L+++ V+ G++P
Sbjct: 487 LCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPN 546
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNR-----TIYGIYLESLKNAGNIEKAE 491
+Y ++ Y G + ++ LE N YG + L AG + A
Sbjct: 547 NITYNSILTHYCKQGNIKKA----ADILETMTANGFEIDVVTYGTLINGLCKAGRTQVAL 602
Query: 492 EIFNHM 497
++ M
Sbjct: 603 KLLRGM 608
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 118/300 (39%), Gaps = 42/300 (14%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSL-HNSL 260
+F+++ + G P E+T++ILI S G L A + N M G PR ++ +N++
Sbjct: 429 LFEEMKSSGCTPDEVTYNILIDHLCS---MGKLGNALDLLNEMESNGC--PRSTVTYNTI 483
Query: 261 FRALVSK--------------PGGLSKYY---------------LQQAEFIFHNLLTSGL 291
AL K G+S+ + A + ++ GL
Sbjct: 484 IDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGL 543
Query: 292 EIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDA 351
+ Y+ ++ + Q NI K L + M GFE +++ K G + A
Sbjct: 544 QPNNITYNSILTHYCKQGNIKKAADIL--ETMTANGFEIDVVTYGTLINGLCKAGRTQVA 601
Query: 352 EKTWLRLLESDNGIPTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE 410
K LR + PTP A+ +++ + +L +FREM E Y +
Sbjct: 602 LK-LLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFR 660
Query: 411 LLCKAEETELTESL--MKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR 468
LC+ + E+ + E V G P S+ L LNLGM D L A +EK +
Sbjct: 661 SLCRGG-GPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKAK 719
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 64/334 (19%), Positives = 129/334 (38%), Gaps = 51/334 (15%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
+ +++ + G P E TF L+ ++ +G ++ A + +M++ G P N L
Sbjct: 219 MLEEMSSHGVAPDETTFTTLMQGFIE---EGSIEAALRVKAKMME-AGCSPTGVTVNVLI 274
Query: 262 RALVSKPGGLSKY--YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLL 319
K G + Y+QQ + G E + Y+ ++H N +
Sbjct: 275 NGYC-KMGRVEDALGYIQQE-------IADGFEPDQVTYN--TFVHGLCQNGHVSHALKV 324
Query: 320 KKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAK 379
M Q G + +V+ +K G++++A+ ++++ T F + A +
Sbjct: 325 MDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSS 384
Query: 380 IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPS 439
++L++ RE+ + S V ++ +I LCK + L L +E +G
Sbjct: 385 QNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG------- 437
Query: 440 YINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
C P+ Y I ++ L + G + A ++ N M S
Sbjct: 438 ---------------------------CTPDEVTYNILIDHLCSMGKLGNALDLLNEMES 470
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ +T + N I+ A +AE+++D M
Sbjct: 471 NGC-PRSTVTYNTIIDALCKKMRIEEAEEVFDQM 503
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 13/240 (5%)
Query: 155 MRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPS 214
+++ + + GFR+ + M + D + L + + KE K + +FD+++++G VP+
Sbjct: 182 IKLGDLDEGFRL-KSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPN 240
Query: 215 EMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKY 274
+TF LI + G LD A IY +M+ G+ P +N+L L K
Sbjct: 241 GVTFTTLIDGHCK---NGKLDLAMEIYKQMLS-QGFSPDXITYNTLIYGLCKKGD----- 291
Query: 275 YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEV 334
L QA+ + + GL+ K Y+ LI + ++ E +K M +
Sbjct: 292 -LXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDL--ETAFEYRKRMIKENIRLDDVS 348
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
+++ KEG DAEK +L T + M + K G+ ++ +EMQ
Sbjct: 349 YTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQ 408
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 128/315 (40%), Gaps = 40/315 (12%)
Query: 151 AVHCMRI-REN------ETGFRVYEWMMQQHWYRFDFALATK---------------LAD 188
A+ C R+ REN +T +V E +M+ +++ ++ + L D
Sbjct: 85 AIECFRLTRENKYWVPFDTCRKVLEHLMKLKYFKLVWSFYKEILECRYPASLYFFNILMD 144
Query: 189 YMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLG 248
KE + + +FD I G PS ++F+ L+ Y+ G LDE + + M
Sbjct: 145 RFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKL---GDLDEGFRLKSAM-HAS 200
Query: 249 GYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQ 308
G QP ++ L L + + +A +F +L GL ++ LI H
Sbjct: 201 GVQPDVYTYSVLINGLCKESK------MDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKN 254
Query: 309 DNIDKERISL-LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+D +++ + K+M GF +++ K+GD+ A+ + S G+
Sbjct: 255 GKLD---LAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEM--SMKGLKP 309
Query: 368 PAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
Y ++ K G+ + E + M + +Y +I LCK + E ++
Sbjct: 310 DKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKML 369
Query: 426 KEFVETGMKPLMPSY 440
+E + G+KP +Y
Sbjct: 370 REMLSVGLKPDTGTY 384
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 115/275 (41%), Gaps = 18/275 (6%)
Query: 346 GDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
G + DA + + E+ +P +E K+ F ++E+ E AS+ +
Sbjct: 80 GFLRDAIECFRLTRENKYWVPFDTCRKVLEHLMKLKYFKLVWSFYKEILECRYPASLYFF 139
Query: 406 HKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECL 464
+ +++ CK E L +S+ + G++P + S+ L N Y+ LG + + L +
Sbjct: 140 NILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHA 199
Query: 465 EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFV 524
+P+ Y + + L +++A ++F+ M D+ + N + ++ + +G
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDEAHKLFDEM-LDRGLVPNGVTFTTLIDGHCKNGKLD 258
Query: 525 KAEKIYDLMCLKKYEIESAWMEKLDYVLS-----LNRKEVKKPVSLNLSSEQRENLIGLL 579
A +IY M + + + L Y L K++ +S+ + L
Sbjct: 259 LAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYT-TL 317
Query: 580 LGGLCIESD-----EKRKRHMIRFQFNENSRMHSV 609
+ G C E D E RKR MI+ EN R+ V
Sbjct: 318 IDGSCKEGDLETAFEYRKR-MIK----ENIRLDDV 347
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 94/219 (42%), Gaps = 3/219 (1%)
Query: 282 IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRV 341
++ +L G Y+ LI ++ + +E I +L +++ G + +V+
Sbjct: 252 VYRQMLAEGCTPNLVTYNTLIDVYG-KTGAWEEAIRVLDA-LERQGIDPEIRTYNTVIIA 309
Query: 342 CAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSAS 401
C G ++A + + R+L + + + AY K G+ ++L+IF++M R +
Sbjct: 310 CNMSGQAQEALRIYERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERN 369
Query: 402 VPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
V Y +I KA EL L +E G +P + +Y +L ++ F
Sbjct: 370 VITYSSLISACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFE 429
Query: 462 ECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+ + C+P+ +G + + AG+ +A F M +
Sbjct: 430 QMQHRGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQMKA 468
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK---ME 375
L EM+ G + +++ VC K +++ A + ++L TP V ++
Sbjct: 217 LVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGC---TPNLVTYNTLID 273
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
Y K G + +++ + ++ + + Y+ +I + + + + + + G +P
Sbjct: 274 VYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQP 333
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+Y L + Y G DR F + + + C N Y + + + AG E A E+F
Sbjct: 334 TATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELF 393
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
MH++ N + N +++A + KA+++++ M
Sbjct: 394 REMHTE-GCRPNVVTYNSLIAACAQGAQWEKAQEMFEQM 431
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 107/262 (40%), Gaps = 15/262 (5%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
C++ E + VY M+ + + L D GK + + + D + QG P
Sbjct: 240 CIKGNELDLALDVYRQMLAEGCTP-NLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDP 298
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSK 273
T++ +I+A + G EA IY RM+ G QP + + +L A K G L +
Sbjct: 299 EIRTYNTVIIA---CNMSGQAQEALRIYERMLAAGA-QPTATTYTALISAY-GKNGQLDR 353
Query: 274 YYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL-LKKEMQQAGFEEGK 332
A IF +++ G E YS LI S + + ++L L +EM G
Sbjct: 354 -----ALQIFQDMVRRGCERNVITYSSLI---SACEKAGRWELALELFREMHTEGCRPNV 405
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
S++ CA+ E A++ + ++ F + AY + G + ++L F +
Sbjct: 406 VTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQ 465
Query: 393 MQERLGSASVPAYHKIIELLCK 414
M+ Y+ I+ L K
Sbjct: 466 MKAHNCRPDSVVYNTIVGALWK 487
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 94/220 (42%), Gaps = 12/220 (5%)
Query: 328 FEEGKEVLLSVLRVCAKEGDVEDAEK--TWLRLLESDNGI----PTPAFVYKMEAYAKIG 381
F+ G L ++L+ K G V A++ WLR L+ + + T + +
Sbjct: 152 FDSG--ALAALLKELNKSGHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQ 209
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ ++LE+ EM+ R +V Y ++ + K E +L + ++ + G P + +Y
Sbjct: 210 QLRRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYN 269
Query: 442 NLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
L ++Y G + + + LE+ P Y + + +G ++A I+ M +
Sbjct: 270 TLIDVYGKTGAWEEA-IRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLA 328
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYE 539
T + ++SAY +G +A +I+ M + E
Sbjct: 329 AGAQPTAT-TYTALISAYGKNGQLDRALQIFQDMVRRGCE 367
>gi|428186270|gb|EKX55120.1| hypothetical protein GUITHDRAFT_53115, partial [Guillardia theta
CCMP2712]
Length = 363
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 128/294 (43%), Gaps = 19/294 (6%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNS- 259
+++ ++ QG P+E TF LI A G + +A ++ RM Q R + N
Sbjct: 84 NMYHEMEAQGIEPNEFTFAALITACEKG---GQVSKAFEVFERM------QARGIVGNVY 134
Query: 260 LFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISL- 318
F A +S L + Q+A + ++ G++ YS I S + + R +L
Sbjct: 135 TFTAAISSCEKLGDW--QRALKLLEEMIAKGIQPNLQAYSAAI---SACEKAAEARPALG 189
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA 378
L + M + V +V+ C K G E A + + ++ A+ ++AY
Sbjct: 190 LLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTPDVVAYSTLIQAYQ 249
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
+ GE+ ++LE+F+ M++ +V AY + I KA E + L++ ++P
Sbjct: 250 RAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGEWRRSLGLLERMKADKLRPDAV 309
Query: 439 SYINLTNMYLNLGMHDRLHLAFSECLE--KCRPNRTIYGIYLESLKNAGNIEKA 490
+Y N L+ G L + LE + +PN + Y +++ + G EKA
Sbjct: 310 AY-NFVISALSRGGQWDAGLTLLQMLEEDEAQPNISTYCTVIKACGDNGQWEKA 362
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/387 (19%), Positives = 155/387 (40%), Gaps = 35/387 (9%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E F+++E M + T + + + K+ K + ++ D + G P+ +T+ +
Sbjct: 117 EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSV 176
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ A G D+ ++ M + G +QP ++N+L L L +A
Sbjct: 177 LVEGLCKA---GRTDKGFTLLQEMTRRG-FQPDVIMYNTLLNGLCKS------RRLDEAL 226
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ ++ SG Y+ L+ L +D R L + M + G +V+
Sbjct: 227 ELVQLMIRSGCYPTVVTYNSLMELFCRSKQVD--RAFRLIQVMSERGCPPDVINYNTVIA 284
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFM-------------KSL 387
++ ++DA+ L+ + + +P + Y+ I + + +
Sbjct: 285 GLCRDARLDDAQ-ALLKQMVAARCVP------DVITYSTIIDGLCKDWRVDADWKLEAAC 337
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
EI M++ + Y +IE LC+A +++ +L++ +++ + P + S+ +
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSL 397
Query: 448 LNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN 506
D + F E+ C+PN Y ++ L G ++KA +F M GV
Sbjct: 398 CKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVA 457
Query: 507 TRSCNIILSAYLSSGDFVKAEKIYDLM 533
T N +L G +A ++ + M
Sbjct: 458 TY--NSVLDGLCGVGRIEEAVRMVEGM 482
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 379 KIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ G+ +++++FRE ER VP Y +I LCKA + + L+ E + G+ P
Sbjct: 10 RAGQHGQAVQLFRE--ER----CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPP 63
Query: 436 LMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ + + G D L + KC P+ + I +++L +G +E+A +IF
Sbjct: 64 GVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIF 123
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
MH+ N + +++ G +A ++ DLM
Sbjct: 124 ESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLM 162
>gi|168016406|ref|XP_001760740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688100|gb|EDQ74479.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 466
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/346 (19%), Positives = 140/346 (40%), Gaps = 15/346 (4%)
Query: 155 MRIRENE--TGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRV 212
+RI++NE + RV+E + Q WY + + KL + + ++ ++FD ++
Sbjct: 93 VRIKQNEWESALRVFELVRIQEWYTAEVSTYVKLLTMLARVKQPQAASNLFDFLLQDKLR 152
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ F LI + + + L +A ++ +M G P + ++ + GL
Sbjct: 153 PTLEIFTALITVFTKSNL---LKKAFEVFEQMRLFDGCLPDKYAYTTMIKGCCD--AGL- 206
Query: 273 KYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGK 332
QA+ +F+ ++ G+E Y+ LI+ Y I L M+ G
Sbjct: 207 ---YDQAKKLFNEMMREGVEPTIVTYNTLIF--GYGKAGLFAEIEYLLSLMEANGITPDT 261
Query: 333 EVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
+++RV + + E+ + LL + Y + G + K +E +
Sbjct: 262 ITWNTLIRVFGLHNRIPEMEQAYEGLLAQGLMADEVTLNSLIGTYGRAGLYGK-MECVTD 320
Query: 393 MQERLG-SASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG 451
R + Y+ IIE+ KA + E ++ K G+KP ++ ++ + Y G
Sbjct: 321 FMRRYSYPMTTVTYNIIIEIYGKARKIEQMDTAFKRMKAQGLKPNCITFSSILSAYGKHG 380
Query: 452 MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
++ + + +Y +++ + A + E E++F M
Sbjct: 381 EWHKIEKIMRQVRHYNAADTAVYNAAIDAHRRALDFEAMEKLFEEM 426
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/387 (19%), Positives = 155/387 (40%), Gaps = 35/387 (9%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E F+++E M + T + + + K+ K + ++ D + G P+ +T+ +
Sbjct: 117 EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSV 176
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ A G D+ ++ M + G +QP ++N+L L L +A
Sbjct: 177 LVEGLCKA---GRTDKGFTLLQEMTRRG-FQPDVIMYNTLLNGLCKS------RRLDEAL 226
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ ++ SG Y+ L+ L +D R L + M + G +V+
Sbjct: 227 ELVQLMIRSGCYPTVVTYNSLMELFCRSKQVD--RAFRLIQVMSERGCPPDVINYNTVIA 284
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFM-------------KSL 387
++ ++DA+ L+ + + +P + Y+ I + + +
Sbjct: 285 GLCRDARLDDAQ-ALLKQMVAARCVP------DVITYSTIIDGLCKDWRVDADWKLEAAC 337
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
EI M++ + Y +IE LC+A +++ +L++ +++ + P + S+ +
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSL 397
Query: 448 LNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN 506
D + F E+ C+PN Y ++ L G ++KA +F M GV
Sbjct: 398 CKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVA 457
Query: 507 TRSCNIILSAYLSSGDFVKAEKIYDLM 533
T N +L G +A ++ + M
Sbjct: 458 TY--NSVLDGLCGVGRIEEAVRMVEGM 482
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 379 KIGEFMKSLEIFREMQERLGSASVP---AYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ G+ +++++FRE ER VP Y +I LCKA + + L+ E + G+ P
Sbjct: 10 RAGQHGQAVQLFRE--ER----CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPP 63
Query: 436 LMPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
+ + + G D L + KC P+ + I +++L +G +E+A +IF
Sbjct: 64 GVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIF 123
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
MH+ N + +++ G +A ++ DLM
Sbjct: 124 ESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLM 162
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 93/216 (43%), Gaps = 3/216 (1%)
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
K+M + GF S++ K G+V+DA K ++ + ++ K
Sbjct: 116 KKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKS 175
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
+F+++ E+ EM+ + Y +I LCKA++ E E +++ +G P + Y
Sbjct: 176 QKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 235
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEKCR--PNRTIYGIYLESLKNAGNIEKAEEIFNHMH 498
++ + + G E + K R P+ Y ++ L G I +A+ I + M
Sbjct: 236 SSIIHAFCKSGKLLEAQKTLQE-MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQ 294
Query: 499 SDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
+ + + + +++ S V+A+K+ D MC
Sbjct: 295 ESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMC 330
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYA 378
L +EM+ AGF ++ A GD+ D LR + D + T + + A+A
Sbjct: 12 LLEEMKSAGFAPDAFTHTPIITAMANAGDL-DGAMDHLRSMGCDPNVVT--YTALIAAFA 68
Query: 379 KIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMP 438
+ + +++++ EM+ER ++ Y+ +++ LCK + ++K+ +E G P +
Sbjct: 69 RAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVM 128
Query: 439 SYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
++ +L + + G + D L + RPN Y ++ L + +A+E+ M
Sbjct: 129 TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM 188
Query: 498 HS 499
+
Sbjct: 189 KA 190
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 142/355 (40%), Gaps = 38/355 (10%)
Query: 158 RENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMT 217
R N R +M R + + L D + K +KF + +++ +++ G P T
Sbjct: 140 RGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFT 199
Query: 218 FHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGL--SKYY 275
+ LI A ++EA + RM G P +++S+ A K G L ++
Sbjct: 200 YSALIHGLCKADK---IEEAEQMLRRMAG-SGCTPDVVVYSSIIHAF-CKSGKLLEAQKT 254
Query: 276 LQQ-------AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
LQ+ + + +N + GL I + L Q++ D +L + +
Sbjct: 255 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGD-----VLPDVVTYSTV 309
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
G +C + VE A+K R+ ++ + ++ K G ++
Sbjct: 310 ING---------LCKSDMLVE-AQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEY 359
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+ + M+ + +V Y +I LCKA + + E +M+E G P + +Y + N
Sbjct: 360 LLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVN--- 416
Query: 449 NLGMHDRLHLA------FSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
L + R+ A + +C P+ Y + +L ++ +++AE++ M
Sbjct: 417 GLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 127/313 (40%), Gaps = 32/313 (10%)
Query: 195 KFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY---Q 251
+ + + ++ +++ G S +T++IL+ + A + EA + N ++ GG
Sbjct: 151 RLGEAQQFYERLLSSGAGASFITYNILVDGFCKADR---VPEAVELLNELVARGGVVTSA 207
Query: 252 PRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNI 311
P + ++LF+ K + +AE F+ + G+ Q+ ++ LI D +
Sbjct: 208 PYNCIIDTLFK----------KGKIHEAELFFNRMEKDGVRPQEVTFTVLI------DGL 251
Query: 312 DKERISLLKKEMQQAGFEEGKE---VLLSVLR--VCAKEGDVEDAEKTWLRLLESDNGIP 366
K KE+ + E G V+ S L C K G V++A + + L+ + P
Sbjct: 252 CKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFC-KYGGVDEAWRIF-ELMTNRGCTP 309
Query: 367 TPAFV-YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
+ K ++ E+F E+ +R V Y ++ LC+A + ++
Sbjct: 310 NDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVL 369
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIYLESLKN 483
V+ G P + Y L + +LG D F + C PN + +
Sbjct: 370 CMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGL 429
Query: 484 AGNIEKAEEIFNH 496
AG +++A E+F
Sbjct: 430 AGRLDEARELFQR 442
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/421 (19%), Positives = 162/421 (38%), Gaps = 84/421 (19%)
Query: 276 LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVL 335
L +A +FH+L++ G + D L+ + +E + ++K + + E V
Sbjct: 15 LDEALELFHSLVSDGCGLPAD----LLVRELSKAGRAEECLKVVKLMLDRQQLRERHLVN 70
Query: 336 LSVLRVCAKEGDVEDAEKTWLRLLESDNG-IPTPAFVYKMEAYAKIGEFMKSLEIFREMQ 394
+++ +C + D+ D ++W + L+ G + T ++ + A+ K +++++F EM+
Sbjct: 71 ITIDSLC--KSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMK 128
Query: 395 ---------------------ERLG--------------SASVPAYHKIIELLCKAEETE 419
ERLG AS Y+ +++ CKA+
Sbjct: 129 APGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVP 188
Query: 420 LTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK--CRPNRTIYGIY 477
L+ E V G Y + + G L F+ +EK RP + +
Sbjct: 189 EAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNR-MEKDGVRPQEVTFTVL 247
Query: 478 LESLKNAGNIEKAEEI-FNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLK 536
++ L A + +A+EI F+++ S + V SC ++ + G +A +I++LM
Sbjct: 248 IDGLCKANRVARAKEIFFSYLESGGSPSVVICSC--LMDGFCKYGGVDEAWRIFELM--- 302
Query: 537 KYEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMI 596
NR VS N +L+ GLC + ++
Sbjct: 303 -----------------TNRGCTPNDVSCN-----------ILINGLC----KAKRLSQA 330
Query: 597 RFQFNENSRMHSVLRRYLYDQYHEWLHPSFKFWPKGRLVIPKLIHRWLTPRALAYWFMYG 656
R F E + + Y + + L + + + R V+ L+ + TP + Y +
Sbjct: 331 REVFEEVVKRQAKPDVVTYSTFMDGLCRAHRV-DQARQVLCMLVDKGGTPDVVMYTALIS 389
Query: 657 G 657
G
Sbjct: 390 G 390
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 171/402 (42%), Gaps = 20/402 (4%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
+R +EW +Q Y + + + K R++ D+ + + N+ + E F I++
Sbjct: 39 AYRFFEWASKQRNYVHSVRAYHSMIESLAKIRQYQMVWDLVNAMRNKEILNVE-AFCIIM 97
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFI 282
Y A ++EA +N M + +P + N L AL +++A+ I
Sbjct: 98 RKYARAQK---VEEAVYTFNVM-EKYNMKPNVAAFNGLLSALCKSKN------VRKAQEI 147
Query: 283 FHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
F N+ + K YS LI N+ K R + +EM +G + ++ V
Sbjct: 148 FDNMKDQFVPDSKT-YSILIEGWGRAPNLPKAR--EIYREMIDSGCIPDEVTYSIMVDVL 204
Query: 343 AKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREMQERLGSA 400
K G V++A + ++ ++ +N P+ +F+Y + Y ++ F EM+ A
Sbjct: 205 CKAGRVDEAVEI-VKEMDYNNCKPS-SFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMA 262
Query: 401 SVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAF 460
V AY+ +I CKA + + ++K+ G+ P + + N + G D F
Sbjct: 263 DVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIF 322
Query: 461 SECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSS 520
++ C P+ Y + ++ ++ A +I+ +M Q + + + +++++
Sbjct: 323 RRMIKVCEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVP-SMHTFSVLINGLCQI 381
Query: 521 GDFVKAEKIYDLMCLKKYEIESAWMEKLDYVL-SLNRKEVKK 561
G+ +A + + M K A +L ++L RK+V K
Sbjct: 382 GNATQACVLLEEMIEKGIRPSGATFGRLRHLLIKEGRKDVLK 423
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 154/375 (41%), Gaps = 16/375 (4%)
Query: 171 MQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPV 230
MQ+ + D L + G+ ++ +I DD++ PS T++ LI A S+
Sbjct: 176 MQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSS-- 233
Query: 231 QGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSG 290
G EA ++ +M G P HN + A K G L E I +
Sbjct: 234 -GNWKEALNVCKKMTD-NGVGPDLVTHNIMLTAF--KSGTQYSKALSYFELIKGTHIRPD 289
Query: 291 LEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL--SVLRVCAKEGDV 348
I L+ L Y +D + M++ E +V+ S++ + + G +
Sbjct: 290 TTTHNIIIHCLVKLKQYDKAVD------IFNSMKEKKSECHPDVVTFTSMIHLYSVCGHI 343
Query: 349 EDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKI 408
E+ E + +L ++ + AYA G ++L++F E+++ V +Y +
Sbjct: 344 ENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSL 403
Query: 409 IELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEKC 467
+ ++ + + + K +KP + SY L + Y + G + D + + +K
Sbjct: 404 LNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKI 463
Query: 468 RPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAE 527
PN L + G K + + + + I +NT + N + +Y++ G++ KA
Sbjct: 464 HPNVVSICTLLAACGRCGQKVKIDTVLSAAEM-RGIKLNTVAYNSAIGSYINVGEYDKAI 522
Query: 528 KIYDLMCLKKYEIES 542
+Y+ M KK + +S
Sbjct: 523 DLYNSMRKKKIKSDS 537
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 137/336 (40%), Gaps = 34/336 (10%)
Query: 199 CRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHN 258
C F+ ++ +G P+ ++++ L+ AY + +G +EA ++N + Q G++P +
Sbjct: 346 CEAAFNMMLAEGLKPNIVSYNALLGAYAA---RGMENEALQVFNEIKQ-NGFRPDVVSYT 401
Query: 259 SLFRAL--VSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERI 316
SL A KP Q+A IF + + L+ Y+ LI +Y N E
Sbjct: 402 SLLNAYGRSRKP--------QKAREIFKMIKRNNLKPNIVSYNALI--DAYGSNGLLEDA 451
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEA 376
+ +EM+Q + ++L C + G + + T A+ + +
Sbjct: 452 IEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGS 511
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
Y +GE+ K+++++ M+++ + Y +I CK + S M+E + +
Sbjct: 512 YINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMS 571
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLEK-----------CRPNRTIYGIYLESLKNAG 485
Y ++ Y + A + +E C P+ Y L++ A
Sbjct: 572 KEVYSSIICAY------SKQASALGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAAE 625
Query: 486 NIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
EK +F M + + ++T +C ++ A+ G
Sbjct: 626 KWEKLYALFEEMEEND-VKLDTIACAALMRAFNKGG 660
>gi|296084064|emb|CBI24452.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 142/345 (41%), Gaps = 64/345 (18%)
Query: 154 CMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVP 213
C +++ + G ++ +++ H D + L + K + R +FD I + V
Sbjct: 117 CGAMKDGKKGQAIHGHVVK-HGLDLDLFVGNALVAFYAKCNEIGASRRVFDMISEKDIV- 174
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGG---YQPRPSLHNSLFRALVSKPGG 270
T++ +I Y + GC D+A +++ M+Q+ G Y P + ++ A
Sbjct: 175 ---TWNSMISGY---AINGCADDALVLFHNMLQVQGDTVYAPDSATLVAILPACAQAAA- 227
Query: 271 LSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEE 330
+Q+ +I ++ SG+E+ + SGLI +++ LL +
Sbjct: 228 -----IQEGLWIHSYVIKSGIELDAALGSGLIAMYA--------NCGLLNSARDVFDRID 274
Query: 331 GKEVLL--SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
K +++ +++R G ++A K + L++S F+ + A++ G + +E
Sbjct: 275 DKNIVVWNAIIRCYGMHGHADEALKMFSGLIDSGLHPDGVIFLCLLSAFSHAGMVAEGME 334
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+F +M + S Y ++++L +A L E++ EFV+ MP
Sbjct: 335 LFEKMGDYGVEKSSEHYASVVDILGRA--GFLHEAV--EFVKN-----MP---------- 375
Query: 449 NLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEI 493
+P + +YG L + + NIE AEEI
Sbjct: 376 ------------------VQPGKDVYGALLGACRIHNNIELAEEI 402
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 114/251 (45%), Gaps = 16/251 (6%)
Query: 193 ERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQP 252
E++ + D+ ++ +G P +T++I I Y G +A S+++ M++
Sbjct: 370 EKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRC---GNAKKALSLFDEMVE---KNI 423
Query: 253 RPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNID 312
RP++ + +L+ G ++ + +AE F + G+ +++ LI H NID
Sbjct: 424 RPTVET--YTSLIDVFGKRNR--MSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNID 479
Query: 313 KERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVY 372
R L KEM A + ++++ +E VE+A+K + E GI Y
Sbjct: 480 --RAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKE--RGIKPDHISY 535
Query: 373 K--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
+ Y+K G+ +LE+F EM ++ Y+ +I+ K E + E L++E
Sbjct: 536 NTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQS 595
Query: 431 TGMKPLMPSYI 441
G+ P +Y+
Sbjct: 596 KGITPDDSTYL 606
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/388 (20%), Positives = 159/388 (40%), Gaps = 34/388 (8%)
Query: 131 LVRILNAQKKWLRQED-----------------GTYLAVHCMRIRENETGFRVYEWMMQQ 173
++ IL + KW + +D T + +C+R + E ++++ M +
Sbjct: 223 MINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLR-GKFEAASKIFKTMKDK 281
Query: 174 HWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGC 233
+ + D + KER+ + + ++ G VP+ +T++ LI + +G
Sbjct: 282 NL-KPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCN---KGD 337
Query: 234 LDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEI 293
LD+A + + M+ G +N L AL L K +++AE + + G+E
Sbjct: 338 LDKAFAYRDEMMN-RGIVASVFTYNLLIHALF-----LEK-RIEEAEDMIKEMREKGVE- 389
Query: 294 QKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEK 353
D+ + I ++ Y + ++ L EM + E S++ V K + +AE+
Sbjct: 390 -PDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEE 448
Query: 354 TWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLC 413
+ + ++ F ++ + G ++ ++ +EM ++ +++ C
Sbjct: 449 KFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYC 508
Query: 414 KAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLE-KCRPNR 471
+ + E + L+ E E G+KP SY L + Y G M D L + F E L P
Sbjct: 509 RERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEV-FDEMLSLGFDPTL 567
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHS 499
Y ++ G + AEE+ M S
Sbjct: 568 LTYNALIQGYSKIGEADHAEELLREMQS 595
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ Y G+F + +IF+ M+++ Y+ I LCK E ++ + +E+G+
Sbjct: 259 INGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGL 318
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTI------YGIYLESLKNAGNI 487
P +Y L + N G D+ E + NR I Y + + +L I
Sbjct: 319 VPNAVTYNALIDGCCNKGDLDKAFAYRDEMM-----NRGIVASVFTYNLLIHALFLEKRI 373
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
E+AE++ M ++ + + + NI ++ Y G+ KA ++D M
Sbjct: 374 EEAEDMIKEMR-EKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEM 418
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 168/390 (43%), Gaps = 20/390 (5%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
T L DY+ KE + + + ++++ +G PS + F+ LI +Y +G +++A +
Sbjct: 329 TVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCK---RGMMEDAVGVLGL 385
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M + P +N L G + +A + + ++ S L Y+ LI
Sbjct: 386 M-ESKKVCPNVRTYNELI------CGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLI- 437
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
H + + S L + M + GF + + + + G V +A + L E
Sbjct: 438 -HGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHV 496
Query: 364 GIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTES 423
A+ ++ Y K G+ + +F+ M + ++ +I+ L K + +
Sbjct: 497 KANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAML 556
Query: 424 LMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLK 482
L+++ + +KP + +Y L L DR + + + +PN Y ++++
Sbjct: 557 LVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYC 616
Query: 483 NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG----DFVKAEKIYDLMCLKKY 538
+ G +E+AEE+ + ++ + +++ N++++AY G F +++ C Y
Sbjct: 617 SQGRLEEAEEMVIKIKNEGVL-LDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSY 675
Query: 539 EIESAWMEKLDYVLSLNRKEVKKPVSLNLS 568
S M+ L V+ ++KE PV L++S
Sbjct: 676 LTYSILMKHL--VIEKHKKEGSNPVGLDVS 703
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/406 (19%), Positives = 152/406 (37%), Gaps = 51/406 (12%)
Query: 162 TGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHIL 221
T + W+ + H + A L + + R ++ + +I P + TF +
Sbjct: 68 TALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATFLLN 127
Query: 222 IVAYLSAPVQG---------------------CL------DEACSIYNRMIQLGGYQPRP 254
++ ++ CL DE S+Y M+ G
Sbjct: 128 LLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNG----- 182
Query: 255 SLHNSLFRALVSKPGGLSKYY----LQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
NS+F L++ L+ Y + A F +L E D+++ + Y N
Sbjct: 183 ---NSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRC--EPGPDLFTYTSLVLGYCRN 237
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTP-A 369
D ER + M + ++ + + G + +A + W R+ E D PT
Sbjct: 238 DDVERACGVFCVMPRRNAVSYTNLIHGL----CEAGKLHEALEFWARMRE-DGCFPTVRT 292
Query: 370 FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFV 429
+ + A + G +++L +F EM+ER +V Y +I+ LCK + ++ E V
Sbjct: 293 YTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMV 352
Query: 430 ETGMKPLMPSYINLTNMYLNLGMHDRL--HLAFSECLEKCRPNRTIYGIYLESLKNAGNI 487
E G+ P + + L Y GM + L E + C PN Y + ++
Sbjct: 353 EKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVC-PNVRTYNELICGFCRGKSM 411
Query: 488 EKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
++A + N M + + + + N ++ G A +++ LM
Sbjct: 412 DRAMALLNKM-VESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLM 456
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 141/339 (41%), Gaps = 56/339 (16%)
Query: 214 SEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL-FRALVSKPGGLS 272
+E + LI Y A G ++ A S++ RM+ L NS+ F ++ GL
Sbjct: 499 NEHAYTALIDGYCKA---GKIEHAASLFKRMLA------EECLPNSITFNVMID---GLR 546
Query: 273 KY-YLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEG 331
K +Q A + ++ + +++ +++ I + D +R + + + +G++
Sbjct: 547 KEGKVQDAMLLVEDM--AKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPN 604
Query: 332 KEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEI 389
+ ++ +G +E+AE+ +++ + G+ +F+Y + AY +G + +
Sbjct: 605 VVTYTAFIKAYCSQGRLEEAEEMVIKI--KNEGVLLDSFIYNLLINAYGCMGLLDSAFGV 662
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTES-LMKEFV-----ETGMKPLMPSYINL 443
R M G+ P+Y LT S LMK V + G P+ ++L
Sbjct: 663 LRRM---FGTGCEPSY--------------LTYSILMKHLVIEKHKKEGSNPVGLD-VSL 704
Query: 444 TNMY---------LNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIF 494
TN+ ++ G+ L +EC C PN Y + L G + A ++
Sbjct: 705 TNISVDNTDIWSKIDFGITTVLFEKMAEC--GCVPNLNTYSKLINGLCKVGRLNVAFSLY 762
Query: 495 NHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+HM + I + N +LS+ G F +A + D M
Sbjct: 763 HHMR-EGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSM 800
>gi|449525698|ref|XP_004169853.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Cucumis sativus]
Length = 494
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 9/231 (3%)
Query: 166 VYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAY 225
V+ WM +Q WY D + +KL MGK+ + +F ++ N G P ++ LI A+
Sbjct: 113 VFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAH 172
Query: 226 LSAPVQG-CLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFH 284
L + + L + S + +M + +P +N L RA + Q +F
Sbjct: 173 LHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAK------VDQVNTLFK 226
Query: 285 NLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAK 344
+L S + DIY+ + +Y N + + + L+ M+ + ++ K
Sbjct: 227 DLDES--VVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGK 284
Query: 345 EGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
+ + E+ + LL S P F + Y K K+ E+FR+M++
Sbjct: 285 KQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKD 335
>gi|168049701|ref|XP_001777300.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671276|gb|EDQ57830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 291
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 9/201 (4%)
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAK--IGEFMKSLEIFREMQ 394
S+L K G VE A + + + + D + M Y K +G K L +F+EM
Sbjct: 50 SLLHAYCKSGQVETANELFNSMKQKDCRPDLSTYNTIMNMYVKTDVG-LTKVLSLFKEMC 108
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET-GMKPLMPSYINLTNMYLNLGMH 453
+ V +Y ++ + + + + + G+KP + +Y +L +Y N G++
Sbjct: 109 LQGIQPDVVSYDILLAACAPKQHVKEAQRIFDTMKKRRGIKPTVVTYTSLITVYANAGIY 168
Query: 454 ---DRLHLAFSECL-EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRS 509
++L F E + EKC+PN + + S + G++E+A+ IF M + + N +
Sbjct: 169 SSPNQLCPLFGEMVAEKCQPNVKTFTSLINSCRKGGHVEEAQTIFEAMK-EYGVKPNVVT 227
Query: 510 CNIILSAYLSSGDFVKAEKIY 530
N +++ Y G+ A++++
Sbjct: 228 YNALINVYTERGEQDGAQRVF 248
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Query: 388 EIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMY 447
+IF +M + + +V Y+ ++ CK+ + E L + +P + +Y + NMY
Sbjct: 32 KIFSDMDDSVKKDTV-LYNSLLHAYCKSGQVETANELFNSMKQKDCRPDLSTYNTIMNMY 90
Query: 448 L--NLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGV 505
+ ++G+ L L CL+ +P+ Y I L + ++++A+ IF+ M + I
Sbjct: 91 VKTDVGLTKVLSLFKEMCLQGIQPDVVSYDILLAACAPKQHVKEAQRIFDTMKKRRGIKP 150
Query: 506 NTRSCNIILSAYLSSGDFVKAEKIYDL 532
+ +++ Y ++G + ++ L
Sbjct: 151 TVVTYTSLITVYANAGIYSSPNQLCPL 177
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 124/327 (37%), Gaps = 54/327 (16%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
M Q W R D L T + D +G + IF D+ + + + + ++ L+ AY +
Sbjct: 1 MQLQGWCRLDPHLYTTIIDTLGSSGCLDLAKKIFSDMDDSVKKDTVL-YNSLLHAYCKS- 58
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
G ++ A ++N M Q +P S +N++ V GL+K +F +
Sbjct: 59 --GQVETANELFNSMKQ-KDCRPDLSTYNTIMNMYVKTDVGLTKVLS-----LFKEMCLQ 110
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
G IQ D+ S I L + CA + V+
Sbjct: 111 G--IQPDVVSYDILLAA-----------------------------------CAPKQHVK 133
Query: 350 DAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKS---LEIFREMQERLGSASVPA 404
+A++ + ++ GI Y + YA G + +F EM +V
Sbjct: 134 EAQRIF-DTMKKRRGIKPTVVTYTSLITVYANAGIYSSPNQLCPLFGEMVAEKCQPNVKT 192
Query: 405 YHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
+ +I K E +++ + E G+KP + +Y L N+Y G D F + +
Sbjct: 193 FTSLINSCRKGGHVEEAQTIFEAMKEYGVKPNVVTYNALINVYTERGEQDGAQRVFLQMV 252
Query: 465 EK-CRPNRTIYGIYLESLKNAGNIEKA 490
+ +P + + + S K G ++A
Sbjct: 253 QSGLQPTGVSFTVLMSSFKATGAFKEA 279
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 150/368 (40%), Gaps = 44/368 (11%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E +V+E + ++H +F L T L D K KF+ +F ++ +G P+ +TF++
Sbjct: 487 EQAHQVFESLKEKHAEANEF-LYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNV 545
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
L+ +G +++A S+ + M G + +P++H + L+ + L + +A
Sbjct: 546 LLDGLRK---EGKVEDAMSLVDVM---GKFDAKPTVHT--YTILIEEI--LRESDFDRAN 595
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+++SG + Y+ I + Q + + ++K +++ G + ++
Sbjct: 596 MFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVK--IKEEGILLDSFIYDVLVN 653
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKM-------EAYAK-------------- 379
G ++ A +R+ D G Y + E Y K
Sbjct: 654 AYGCIGQLDSAFGVLIRMF--DTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISV 711
Query: 380 -------IGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
I +F +F +M E+ +V Y K+I+ LCK E L L E+G
Sbjct: 712 DNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESG 771
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR-PNRTIYGIYLESLKNAGNIEKAE 491
+ P + +L + LGMH+ +E + Y + + L GN EKAE
Sbjct: 772 ISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAE 831
Query: 492 EIFNHMHS 499
EIF + S
Sbjct: 832 EIFRSLLS 839
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 141/354 (39%), Gaps = 33/354 (9%)
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
+++ G + ++ NS+ ++ VS +A F+ + L + Y+ L
Sbjct: 113 LVRNGFLRAAENVRNSMIKSCVSS---------HEARFVLNLLTHHEFSLSVTSYNRLFM 163
Query: 304 LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDN 363
+ S ID+ ++ L K+M G E +++ K G+V A+ + L++
Sbjct: 164 VLSRFGLIDE--LNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKF-- 219
Query: 364 GIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELT 421
G +F Y + Y KI E + ++F M + + +Y +I C+ + +
Sbjct: 220 GFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEA 279
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLES 480
L + E G P +P+Y L + +G F E +E PN Y + ++
Sbjct: 280 LELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDY 339
Query: 481 LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKY-- 538
G +++ E+ + M ++ + + N ++ Y G A + D M L K
Sbjct: 340 FCKVGKMDEGMEMLSTM-LEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCP 398
Query: 539 ------EIESAWMEK--LDYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLC 584
E+ + K +D ++L K + +S NL + L+ GLC
Sbjct: 399 NSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNT------LIHGLC 446
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 112/275 (40%), Gaps = 18/275 (6%)
Query: 232 GCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGL 291
G +DE ++ M+ G P+L + F +V+ + + +A F L+ G
Sbjct: 169 GLIDELNCLFKDMLNDG---VEPNLIS--FNTMVNAHCKIGNVVVAKAYFC--GLMKFGF 221
Query: 292 EIQKDIYSGLIW----LHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGD 347
Y+ LI +H D I M Q G + +++ + G
Sbjct: 222 CCDSFTYTSLILGYCKIHELGDAYKVFEI------MPQEGCLRNEVSYTNLIHGFCEVGK 275
Query: 348 VEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
+++A + + ++ E P + + A+ ++G+ ++L+ F EM E +V Y
Sbjct: 276 IDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTV 335
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSECLEK 466
+I+ CK + + ++ +E G+ + + L + Y G M D + + S L K
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395
Query: 467 CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQ 501
PN Y + ++++A + N M+ ++
Sbjct: 396 VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENK 430
>gi|356552149|ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Glycine max]
Length = 481
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 149/347 (42%), Gaps = 27/347 (7%)
Query: 160 NETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFH 219
+ + ++ + +Q+WY+ KL +GK R+ + +F+ ++++G P+ +
Sbjct: 104 SHSALEIFALLRKQYWYQPRCRTYAKLLMMLGKCRQPEEASLLFEIMLSEGLKPTVDVYT 163
Query: 220 ILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVS-KPGGLSKYYLQQ 278
L+ AY + G LD+A S M + +P ++ L R + L ++ L +
Sbjct: 164 ALVSAYGQS---GLLDQAFSTVEDMKSVVDCEPDVYTYSILIRCCAKFRRFDLIEHVLAE 220
Query: 279 AEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL-S 337
++ G++ Y+ +I Y E++ +M + G L S
Sbjct: 221 MSYL-------GIKCNCVTYNSII--DGYGKASMFEQMDDALNDMIENGNSHPDVFTLNS 271
Query: 338 VLRVCAKEGDVEDAEKTW--LRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQE 395
+ G ++ EK + +L+ I T F +++Y K G + K + M++
Sbjct: 272 FVGAYGNAGQIDKMEKWYDEFQLMGIKPDITT--FNTMIKSYGKAGMYEKMKTVMDFMEK 329
Query: 396 RLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR 455
R + ++ Y+ +IE+ KA E E + + G+KP +Y +L + Y +G D+
Sbjct: 330 RFFTPTIVTYNTVIEVFGKAGEIEKMDQHFLKMKHLGVKPNSITYCSLVSAYSKVGCIDK 389
Query: 456 L-----HLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ H+ S+ + + + + + AGN++K E+F M
Sbjct: 390 VDSIMRHVENSDVV----LDTPFFNCIISAYGQAGNLKKMGELFLAM 432
>gi|26452823|dbj|BAC43491.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 702
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 164 FRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIV 223
+YE M+ + + + +L D MG+ ++ + + I+ D+I G P+ T+ L+
Sbjct: 300 LNIYE-EMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVR 358
Query: 224 AYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIF 283
AY A D+A +IY M + G SL L+ L+S + Y+ +A IF
Sbjct: 359 AYGRARYG---DDALAIYREMKEKG-----LSLTVILYNTLLSMCADIG--YVDEAFEIF 408
Query: 284 HNLLTS-GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
++ + +S LI +++ + + +LL +M++AGFE VL SV++
Sbjct: 409 QDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALL--QMREAGFEPTLFVLTSVIQCY 466
Query: 343 AKEGDVEDAEKTWLRLLE 360
K V+D +T+ ++LE
Sbjct: 467 GKAKQVDDVVRTFDQVLE 484
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 335 LLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFRE 392
L++VL CA G + E W+ + +GI FV ++ Y+K G+ K+LE+FR+
Sbjct: 277 LVNVLSACASLGSLSQGE--WVHVYIDKHGIEIEGFVATALVDMYSKCGKIDKALEVFRD 334
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
+R V ++ II L + + E V G KP ++I + + ++G+
Sbjct: 335 TSKR----DVSTWNSIITGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGL 390
Query: 453 HDRLHLAFS--ECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSC 510
D+ F + P YG ++ L G E+AEE+ N + +D+
Sbjct: 391 LDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGRMGKFEEAEELVNEVPADEA-------- 442
Query: 511 NIILSAYLSS----GDFVKAEKIYD 531
+I+L + L + G +AE+I +
Sbjct: 443 SILLESLLGACKRFGKLEQAERIAN 467
>gi|125568888|gb|EAZ10403.1| hypothetical protein OsJ_00236 [Oryza sativa Japonica Group]
Length = 378
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 7/198 (3%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDN-----GIPTPAFVYKMEAYAKIGEFMKSLEIFRE 392
VL + G ++DA + + R+ E + + +F ++AY + F ++E+F +
Sbjct: 43 VLDALGRNGKLDDALQLFDRMCEEHDPPRRIAVNLGSFNVMVDAYCRAERFQDAIEVFGK 102
Query: 393 MQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGM 452
M E+ + +Y+ +I+ L K E E L KE E G+ P +Y+ L Y +
Sbjct: 103 MGEKRCAPDALSYNNLIDWLGKNELVGEAEQLYKEMGERGVNPDEYTYVLLIESYFKVDR 162
Query: 453 HDRLHLAFSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCN 511
D F++ + RPN + + L +++A+ F+ M ++ + N S
Sbjct: 163 VDDSVSYFNKMFVAGLRPNANAFNKVIGGLVKVDRLDEAQGFFDKM-PEKEVKPNIGSYE 221
Query: 512 IILSAYLSSGDFVKAEKI 529
++L AY+ + A K+
Sbjct: 222 LLLRAYIDAARLDDAIKM 239
>gi|9755842|emb|CAC01928.1| 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana]
Length = 702
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 164 FRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIV 223
+YE M+ + + + +L D MG+ ++ + + I+ D+I G P+ T+ L+
Sbjct: 300 LNIYE-EMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVR 358
Query: 224 AYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIF 283
AY A D+A +IY M + G SL L+ L+S + Y+ +A IF
Sbjct: 359 AYGRARYG---DDALAIYREMKEKG-----LSLTVILYNTLLSMCADIG--YVDEAFEIF 408
Query: 284 HNLLTS-GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVC 342
++ + +S LI +++ + + +LL +M++AGFE VL SV++
Sbjct: 409 QDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALL--QMREAGFEPTLFVLTSVIQCY 466
Query: 343 AKEGDVEDAEKTWLRLLE 360
K V+D +T+ ++LE
Sbjct: 467 GKAKQVDDVVRTFDQVLE 484
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 6/211 (2%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEA 376
L EMQ G E ++ KEG +E+A + S G+ A Y + A
Sbjct: 36 LMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM--SGKGLALNAVGYNCLISA 93
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
K + +L +F +M + + ++ +I LCK + E L ++ + G+
Sbjct: 94 LCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIAN 153
Query: 437 MPSYINLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFN 495
+Y L + +L G M + L L C + Y +++L AGNIEK +F
Sbjct: 154 TITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFE 213
Query: 496 HMHSDQTIGVNTRSCNIILSAYLSSGDFVKA 526
M S + + N SCNI+++ +G+ A
Sbjct: 214 DMMS-KGLNPNNISCNILINGLCRTGNIQHA 243
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 100/276 (36%), Gaps = 47/276 (17%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L + K+ K ++F D+ ++G P TF+ LI +EA +Y M+
Sbjct: 90 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK---FEEALGLYQDML 146
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
L G +N+L A L + +Q+A + +++L G + Y+GLI
Sbjct: 147 -LEGVIANTITYNTLIHAF------LRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 199
Query: 306 SYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGI 365
NI+K L ++M G + N I
Sbjct: 200 CRAGNIEKGLA--LFEDMMSKGL--------------------------------NPNNI 225
Query: 366 PTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLM 425
+ + G +LE R+M R + + Y+ +I LCK + +L
Sbjct: 226 SCNILI---NGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLF 282
Query: 426 KEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFS 461
+ G+ P +Y L + + GM D HL S
Sbjct: 283 DKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLS 318
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 3/215 (1%)
Query: 287 LTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEG 346
L S + DI + + + Y L KE+ +AG+E ++ K
Sbjct: 198 LFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLD 257
Query: 347 DVEDAEKTWLRLLESDNGIPTPA-FVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAY 405
VE+A + +++++ES N +P F + + K G ++++F EM++ A++ Y
Sbjct: 258 KVEEAWEVFMKMIES-NCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTY 316
Query: 406 HKIIELLCKAEETELTE-SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL 464
+ +I+ LCK T L + G+ P + +Y +L + + F E
Sbjct: 317 NTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEME 376
Query: 465 EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
KC PN Y I ++ L +++A + M +
Sbjct: 377 GKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKA 411
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 130/302 (43%), Gaps = 28/302 (9%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
++F +I VP+ +TF+ LI + A G L++A ++ M ++G + +N+L
Sbjct: 264 EVFMKMIESNCVPNAVTFNTLIAGFCKA---GMLEDAIKLFAEMEKIG-CKATIVTYNTL 319
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
+L K GG+ A +F+ L +GL Y+ LI Q D R+S
Sbjct: 320 IDSLCKKRGGV-----YTAVDLFNKLEGAGLTPTIVTYNSLI-----QGFCDARRLS--- 366
Query: 321 KEMQQAGFEEGK----EVLLSVL--RVCAKEGDVEDAEKTWLRLLESDNGIPTPA-FVYK 373
+ MQ EGK + S+L +C K +++A KT L +++ PT +
Sbjct: 367 EAMQYFDEMEGKCAPNVITYSILIDGLC-KVRRMKEAAKT-LEDMKAHGYTPTVVTYGGL 424
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGM 433
+ + K GE +L F +M+ + + ++ +I+ LCKAE L+ G
Sbjct: 425 INGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGC 484
Query: 434 KPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEI 493
KP + +Y L + + + F C PN T + + L +E+A I
Sbjct: 485 KPDVITYNCLISGLCSANRVEDAQRLFDG--MACAPNVTTFNFLIRGLCAQKKVEEARNI 542
Query: 494 FN 495
+
Sbjct: 543 LD 544
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 82/195 (42%), Gaps = 5/195 (2%)
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIPT-PAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
+C K G V A + +L E PT + ++ + ++++ F EM+ + +
Sbjct: 323 LCKKRGGVYTAVDLFNKL-EGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKC-A 380
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
+V Y +I+ LCK + +++ G P + +Y L N + G L
Sbjct: 381 PNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLF 440
Query: 460 FSEC-LEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
F + L C PN I+ ++ L A + HMH++ + + N ++S
Sbjct: 441 FEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGC-KPDVITYNCLISGLC 499
Query: 519 SSGDFVKAEKIYDLM 533
S+ A++++D M
Sbjct: 500 SANRVEDAQRLFDGM 514
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 357 RLLESDNGIPTPAFVYKM-EAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKA 415
RLL+ NG+ F Y + + K GE K+ +F EM E+ + + II+ LCK
Sbjct: 201 RLLK--NGLGPDDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKM 258
Query: 416 EETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIY 474
+E + ES++++ V++G+ P + +Y + + D+ + +E RPN Y
Sbjct: 259 KEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITY 318
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
+ +G ++ +F M S I +CN + A G +A+ I+D M
Sbjct: 319 NSLIHGYSISGMWNESVRVFKQMSSCGVIPT-VDNCNSFIHALFKHGRTNEAKCIFDSMV 377
Query: 535 LK-------KYEIESAWM 545
LK Y ++W+
Sbjct: 378 LKGPKPDIISYSTNASWV 395
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 161/370 (43%), Gaps = 32/370 (8%)
Query: 202 IFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLF 261
IF+D+ N+G +P +TF +I + G LD+A +N M+ +G P +++ L
Sbjct: 445 IFEDMQNKGMIPDTVTFATVISSLCRI---GRLDDALHKFNHMVDIG-VPPSEAVYGCLI 500
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYS-GLIWLHSYQDNIDKE-RISLL 319
+ + E + L S + + KDI G+ + S +N+ KE R++
Sbjct: 501 QGCCN-----------HGELVKAKELISEM-MNKDIPPPGVKYFSSIINNLCKEGRVAEG 548
Query: 320 KKEMQ---QAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES--DNGIPTPAFVYK- 373
K M Q G S++ G++E+A LL++ GI ++Y
Sbjct: 549 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA----FALLDAMASIGIEPNCYIYGT 604
Query: 374 -MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++ Y K G +L +FR+M + + Y I+ L +A T + + E +E+G
Sbjct: 605 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESG 664
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAE 491
+ +Y + D ++ + + + + I + ++ G ++A+
Sbjct: 665 TTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAK 724
Query: 492 EIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWMEKLDYV 551
E+F+ + S + N ++ +++++ + + +A+ ++ + + +S + + +
Sbjct: 725 ELFDAI-STYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRM 783
Query: 552 LSLNRKEVKK 561
L LN+ EV K
Sbjct: 784 L-LNKAEVAK 792
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 64/332 (19%), Positives = 135/332 (40%), Gaps = 13/332 (3%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
+IF+ ++ +G P++ F+ILI AY G +D+A I+ M Q G P
Sbjct: 409 NIFNLMLTKGIAPNKHVFNILINAYARC---GMMDKAMLIFEDM-QNKGMIP----DTVT 460
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
F ++S + + L A F++++ G+ + +Y LI + K + L+
Sbjct: 461 FATVISSLCRIGR--LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK-ELIS 517
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
+ M + G + S++ KEG V + + ++++ F ME Y +
Sbjct: 518 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 577
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
G ++ + M + Y +++ CK + ++ ++ + G+KP Y
Sbjct: 578 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLY 637
Query: 441 INLTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
+ + F E +E + YG+ L L ++A + + +
Sbjct: 638 SIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFA 697
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYD 531
+ + + NI++SA G +A++++D
Sbjct: 698 -MNVKFDIITFNIVISAMFKVGRRQEAKELFD 728
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 106/252 (42%), Gaps = 18/252 (7%)
Query: 184 TKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNR 243
+ + + + KE + A+ +DI D ++ G+ P+ +TF+ L+ Y + G ++EA ++ +
Sbjct: 533 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC---LVGNMEEAFALLDA 589
Query: 244 MIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIW 303
M + G +P ++ +L G + A +F ++L G++ +YS I
Sbjct: 590 MASI-GIEPNCYIYGTLVD------GYCKNGRIDDALTVFRDMLHKGVKPTSVLYS--II 640
Query: 304 LHSYQDNIDKERISLLKK---EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE 360
LH R + KK EM ++G VL + ++A +L
Sbjct: 641 LHGL---FQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFA 697
Query: 361 SDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL 420
+ F + A K+G ++ E+F + ++ Y +I L K E E
Sbjct: 698 MNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 757
Query: 421 TESLMKEFVETG 432
++L ++G
Sbjct: 758 ADNLFISVEKSG 769
>gi|356564951|ref|XP_003550709.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Glycine max]
Length = 488
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 152/375 (40%), Gaps = 23/375 (6%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
+V++ + +Q +Y+ KL +GK + + +F +I +G P+ + L+
Sbjct: 109 ALQVFDMLREQTFYQPKEGTCMKLIVLLGKSGQPHRAHQLFTTMIEEGLEPTPELYTALL 168
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVS--KPGGLSKYYLQQAE 280
AY + +DEA S+ N M +L QP +++L + V K + Y + AE
Sbjct: 169 AAYCRS---NMIDEAFSVLNEMKKLPLCQPDVFTYSTLIKVCVDAFKFDLVQLLYEEMAE 225
Query: 281 -FIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVL 339
I N +T + + +G+ D ++K +L +Q + + +++
Sbjct: 226 RSITPNTVTQNIVLGGYGKAGMF------DQMEK----VLSSMLQSTTCKPDVWTMNTII 275
Query: 340 RVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
V G ++ EK + + T F + AY K + K + M++
Sbjct: 276 SVFGNMGQIDMTEKWYEKFRYFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 335
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRL--H 457
+ Y+ +IE A + + E + GMK + L N Y N G+ ++
Sbjct: 336 WTTSTYNNVIEAFADAGDAKHMECTFDQMRAEGMKADTKTLCCLINGYANAGLFHKVISS 395
Query: 458 LAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAY 517
+ + LE N T Y L + A ++ + E +F M Q +T + I++ AY
Sbjct: 396 VRLAGKLE-IPENITFYNAVLSACAKAEDLMEMERVFKRMKDSQCQPDDT-TYTIMIEAY 453
Query: 518 LSSGDFVKAEKIYDL 532
G +KIY L
Sbjct: 454 RKEG---MNDKIYYL 465
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 3/129 (2%)
Query: 407 KIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC--L 464
K+I LL K+ + L +E G++P Y L Y M D +E L
Sbjct: 131 KLIVLLGKSGQPHRAHQLFTTMIEEGLEPTPELYTALLAAYCRSNMIDEAFSVLNEMKKL 190
Query: 465 EKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFV 524
C+P+ Y ++ +A + + ++ M ++++I NT + NI+L Y +G F
Sbjct: 191 PLCQPDVFTYSTLIKVCVDAFKFDLVQLLYEEM-AERSITPNTVTQNIVLGGYGKAGMFD 249
Query: 525 KAEKIYDLM 533
+ EK+ M
Sbjct: 250 QMEKVLSSM 258
>gi|297726211|ref|NP_001175469.1| Os08g0248500 [Oryza sativa Japonica Group]
gi|255678284|dbj|BAH94197.1| Os08g0248500 [Oryza sativa Japonica Group]
Length = 1487
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 4/218 (1%)
Query: 327 GFEEGKEVLLSVLRVCAKEGDVEDAEKTWL-RLLESDNGIPTPAFVYKMEAYAKIGEFMK 385
F G V LS + WL RLL G T A ++++ + + K
Sbjct: 1132 AFSVGYVVALSSCEAEYMAASAASTQALWLARLLSDLLGRDTGAVELRVDSKSALA-LAK 1190
Query: 386 SLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTN 445
R Q V Y +I+ C A + + L+ + V G+KP +Y L N
Sbjct: 1191 KPRFSRTEQAHPSEVDVITYSTLIDGYCLAGKMDEAMKLLSDMVSVGLKPDTVTYSTLIN 1250
Query: 446 MYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
Y + M + L L PN Y I L+ L G A+EI+ + + I
Sbjct: 1251 GYCKISRMENALSLFRQMVCNGVSPNIITYNIVLQGLFQTGQTRAAKEIYVRI-IKRGIQ 1309
Query: 505 VNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIES 542
+ +CNI+L + +A +++ +CL ++E+
Sbjct: 1310 LEISTCNIVLQGLCKNNLTGEALQMFQNLCLMDVKLET 1347
>gi|297738294|emb|CBI27495.3| unnamed protein product [Vitis vinifera]
Length = 552
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/390 (19%), Positives = 158/390 (40%), Gaps = 29/390 (7%)
Query: 150 LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYMGKERK---FAKCRDIFDDI 206
L C+R R+ FR+ E +++ Y D AL MG K F+ ++D +
Sbjct: 96 LISSCIRARK----FRITESLLEVFSYNDDVALLV-FNSAMGGYNKLHMFSSTIAVYDRM 150
Query: 207 INQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL-GGYQPR----PSLHNSLF 261
+ G VP+ +++ ++ AY+ Y +++ L ++ R ++
Sbjct: 151 KSAGVVPNSESYYRIMEAYIK----------IRDYEKVVTLFQEFESRKIDSSPFSTQIY 200
Query: 262 RALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKK 321
R L G + + + + EF F ++ G+ +YS LI S+ + + L +
Sbjct: 201 RILCESLGKMGRAF-EALEF-FRDMTKKGILEDSAVYSSLIC--SFASIREVKVAEELFR 256
Query: 322 EMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIG 381
E ++ EV L ++ + +EG +E + + + + F + +AK
Sbjct: 257 EAEEKKILRDPEVFLKLVLMYVEEGLMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKKR 316
Query: 382 EFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYI 441
+ +++ E+ + Y II + C+ E E + E + G + +Y
Sbjct: 317 GLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVAYS 376
Query: 442 NLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
++ MY G + + + L C PN +Y ++ N+ + E+++ M
Sbjct: 377 SMVVMYGKTGRLREAMRLVAKMKERGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRK 436
Query: 501 QTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+ + + S ++SAY +GDF + Y
Sbjct: 437 KVVP-DRVSYTSVISAYSKAGDFETCMRFY 465
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 16/279 (5%)
Query: 134 ILNAQKKW-LRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
+ +A KW LR +Y L +R+ + + GFR+ M+ + D + L + +
Sbjct: 146 VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS-GVQPDVYTYSVLINGL 204
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
KE K ++FD+++ +G VP+ +TF LI + G +D A IY +M+
Sbjct: 205 CKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK---NGRVDLAMEIYKQMLS-QSL 260
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
P +N+L L K L QA + + GL+ K Y+ LI + +
Sbjct: 261 LPDLITYNTLIYGLCKKGD------LNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 314
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
+D +K M Q +++ +EG DAEK +L T +
Sbjct: 315 LDAAFEH--RKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTY 372
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKII 409
+ + K G+ K ++ +EMQ SV Y+ ++
Sbjct: 373 TMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLM 411
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 18/220 (8%)
Query: 319 LKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESD---NGIPTPAFVYKME 375
LK M +G + ++ KE ++DA + + +L NG+ F ++
Sbjct: 181 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV---TFTTLID 237
Query: 376 AYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKP 435
+ K G ++EI+++M + + Y+ +I LCK + L+ E G+KP
Sbjct: 238 GHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKP 297
Query: 436 LMPSYINLTNMYLNLGMHDRLHLAFSE----CLEKCRPNRTIYGIYLESLKNAGNIEKAE 491
+Y L + G L AF E R + Y + L G AE
Sbjct: 298 DKFTYTTLIDGCCKEG---DLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAE 354
Query: 492 EIFNHMHSDQTIGV--NTRSCNIILSAYLSSGDFVKAEKI 529
++ M S +G+ +T + +I++ + GD K K+
Sbjct: 355 KMLREMLS---VGLKPDTGTYTMIINEFCKKGDVWKGSKL 391
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 390 FREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLN 449
+ E+ E AS+ ++ ++ CK + + +S+ + G++P + SY L N Y+
Sbjct: 112 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 171
Query: 450 LG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
LG + + L + +P+ Y + + L ++ A E+F+ M
Sbjct: 172 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEM 220
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 110/252 (43%), Gaps = 16/252 (6%)
Query: 295 KDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKT 354
+D+ S + + Y +N + E L MQ+ G + + + ++ CA D+ A +
Sbjct: 327 RDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREI 386
Query: 355 WLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQER---LGSASVPAYHKIIEL 411
+++ + G + YAK G + ++F M R SA + AY +E
Sbjct: 387 HSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAY---VEN 443
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNR 471
C E E T LMK ++P + +YINL N +LG D +++ ++ +
Sbjct: 444 GCGEEAFE-TFHLMK---RNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSH 499
Query: 472 TIYGIYLESLK-NAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
G L ++ G+IE+A IF +M + + N+++ Y G+ +A ++
Sbjct: 500 IPVGNALINMNVKHGSIERARYIFENMVQRDVV-----TWNVMIGGYSLHGNAREALDLF 554
Query: 531 DLMCLKKYEIES 542
D M +++ S
Sbjct: 555 DRMLKERFRPNS 566
>gi|302769109|ref|XP_002967974.1| hypothetical protein SELMODRAFT_88078 [Selaginella moellendorffii]
gi|300164712|gb|EFJ31321.1| hypothetical protein SELMODRAFT_88078 [Selaginella moellendorffii]
Length = 376
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 11/184 (5%)
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEA 376
SLLKKE + +++ +C +EG +E A ++LE T + ++
Sbjct: 24 SLLKKE---------SDYNMTIDLLC-REGLLEQACNVLDKMLEGKYEATTFTYGRLVDG 73
Query: 377 YAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPL 436
+ ++ +F ++L + M ER Y+++I+ LCKA + E L V+ G P
Sbjct: 74 FLRLSKFSEALAVLDVMAERGCIPPAIVYNQLIDGLCKAGKVEEAFELSTTMVKNGCSPT 133
Query: 437 MPSYINLTNMYLNLGMHDRLHLAFSECLEKC-RPNRTIYGIYLESLKNAGNIEKAEEIFN 495
+ +Y +L N G D E + P+ Y + + SL+ GN + A ++F+
Sbjct: 134 LYTYNSLINGLCLQGKTDEARDFLQEMADSGYNPDVVTYTVLINSLRRDGNFKAAVDVFD 193
Query: 496 HMHS 499
M S
Sbjct: 194 EMVS 197
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 142/352 (40%), Gaps = 32/352 (9%)
Query: 161 ETGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHI 220
E V + M++ + F +L D + KF++ + D + +G +P + ++
Sbjct: 46 EQACNVLDKMLEGKYEATTFTYG-RLVDGFLRLSKFSEALAVLDVMAERGCIPPAIVYNQ 104
Query: 221 LIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAE 280
LI A G ++EA + M++ G P +NSL L + +A
Sbjct: 105 LIDGLCKA---GKVEEAFELSTTMVK-NGCSPTLYTYNSLINGLCLQG------KTDEAR 154
Query: 281 FIFHNLLTSGLEIQKDIYSGLIWLHSYQ-DNIDKERISLLKKEMQQAGFEEGKEVLLSVL 339
+ SG D+ + + ++S + D K + + + + + G + + +L
Sbjct: 155 DFLQEMADSG--YNPDVVTYTVLINSLRRDGNFKAAVDVFDEMVSKGGCVPDRASYMPLL 212
Query: 340 RVCAKEGDV----EDAEKTWLRLLESDNGIPTPAFVYKM--EAYAKIGEFMKSLEIFREM 393
KEG V E EK RL D G +F + + ++K G+ + ++FRE
Sbjct: 213 IGLCKEGCVQLVQEFLEKHRARL---DLG----SFFHNLLISTFSKHGKLDDARKVFRE- 264
Query: 394 QERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMH 453
L S + ++ + LC+ + + ++ + G+ P +Y L ++G
Sbjct: 265 ---LASPELVHFNSFMSALCQRKLISEAFQVYEQLQKKGLVPDTYTYTILIGGLCDVGRT 321
Query: 454 DR-LHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIG 504
D+ L L + C+P+ YGI L AG AE++ M + G
Sbjct: 322 DQALSLKDTMIQNNCKPDSVTYGILRAGLLKAGRRADAEQLKAQMPAAAGAG 373
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 79/185 (42%), Gaps = 2/185 (1%)
Query: 338 VLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERL 397
++R G V DA +L + + +EA K F +++++ EM+ +
Sbjct: 143 LIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKG 202
Query: 398 GSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLH 457
+ ++ Y+ II +C+ + + ++ G +P SY + + +
Sbjct: 203 CTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 262
Query: 458 LAFSECLE-KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
+ F E +E C PN + + + G +E+A E+ + M S+ NT CNI++++
Sbjct: 263 VLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRM-SEHGCTANTTLCNIVINS 321
Query: 517 YLSSG 521
G
Sbjct: 322 ICKQG 326
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 142/334 (42%), Gaps = 14/334 (4%)
Query: 201 DIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSL 260
++ ++ +QG VP TF IL Y S D A +Y + G + + L
Sbjct: 678 NVLTEMKDQGFVPDAFTFSILFDGYSSNDKA---DAALGVYETAVD-SGLKMNAYTCSIL 733
Query: 261 FRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLK 320
AL K G + K AE I + GL + +Y+ +I +S + ++ R+ +
Sbjct: 734 LNALC-KEGQIEK-----AEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKI-- 785
Query: 321 KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKI 380
M++ G + ++R + GD+E+AE+ ++ + + Y +
Sbjct: 786 DAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRK 845
Query: 381 GEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSY 440
EF K ++ +EM++ +V +Y +I LCK + + + ++ + G+ P + Y
Sbjct: 846 YEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIY 905
Query: 441 INLTNMYLNLG-MHDRLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHS 499
L + + G + D + + N Y ++ L G + +AE++ + S
Sbjct: 906 NMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEI-S 964
Query: 500 DQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
+ + + + N ++S Y +G+ + +Y+ M
Sbjct: 965 RKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEM 998
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 155/383 (40%), Gaps = 34/383 (8%)
Query: 186 LADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMI 245
L D + K R+ +FD+++ + +PS +T++ LI Y G +++ + RM
Sbjct: 593 LIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCK---DGNPEKSFKVRERM- 648
Query: 246 QLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLH 305
+ +P N+L + L K G ++ AE + + G D ++ I
Sbjct: 649 KADNIEPSLITFNTLLKGLF-KAG-----MVEDAENVLTEMKDQGF--VPDAFTFSILFD 700
Query: 306 SYQDNIDKERISLLKKEMQ-QAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNG 364
Y N DK +L E +G + +L KEG +E AE+ R E G
Sbjct: 701 GYSSN-DKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGR--EMAKG 757
Query: 365 IPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTE 422
+ +Y ++ Y++ G+ + + M+++ AY+ +I C+ + E E
Sbjct: 758 LVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAE 817
Query: 423 SLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCR--------PNRTIY 474
+ + G+ P + +Y L +G + R + F +C + + PN Y
Sbjct: 818 QEVNKMKLKGVSPSVETYNIL------IGGYGRKY-EFDKCFDLLKEMEDNGTMPNVVSY 870
Query: 475 GIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMC 534
G + L + +A+ + M D+ + N R N+++ S G A + + M
Sbjct: 871 GTLINCLCKGSKLLEAQIVKRDME-DRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMF 929
Query: 535 LKKYEIESAWMEKLDYVLSLNRK 557
K E+ L LS+N K
Sbjct: 930 KKGIELNLVTYNTLIDGLSMNGK 952
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 87/213 (40%), Gaps = 39/213 (18%)
Query: 354 TWLRLLESDNGIPTPAFVY--KMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
+L +LESD F+Y ++A K+ + K LE+F M+ S +V Y+ +I+
Sbjct: 539 VFLNILESD--FRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDG 596
Query: 412 LCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDR-LHLAFSECLEKCRPN 470
LCK + + E L E + + P + +Y L + Y G ++ + + P+
Sbjct: 597 LCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPS 656
Query: 471 RTIYGIYLESLKNAGNIEKAEEIFNHM-----------------------HSDQTIGV-- 505
+ L+ L AG +E AE + M +D +GV
Sbjct: 657 LITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYE 716
Query: 506 ---------NTRSCNIILSAYLSSGDFVKAEKI 529
N +C+I+L+A G KAE+I
Sbjct: 717 TAVDSGLKMNAYTCSILLNALCKEGQIEKAEEI 749
>gi|255556562|ref|XP_002519315.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541630|gb|EEF43179.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 149/363 (41%), Gaps = 18/363 (4%)
Query: 163 GFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILI 222
V+E + +Q +Y KL +G+ + + +FD+++ +G P+ + L+
Sbjct: 113 ALEVFEMLKEQPFYHPKEGTYMKLLVLLGRTGQPQRAHQLFDEMVEEGIEPTAELYTALL 172
Query: 223 VAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEF- 281
AY + DEA SI +M L P +++L +A V S++ L +A +
Sbjct: 173 AAYCRNHLT---DEAFSILQQMKTLPRCLPDVYTYSTLLKACVDA----SRFELVEALYQ 225
Query: 282 -IFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLR 340
+ L+T Q + SG Y D +++ +L ++ + + +L
Sbjct: 226 EMGERLITPNTVTQNIVLSGYGKAGMY-DQMER----VLSGMLESTECKPDVWTMNIILS 280
Query: 341 VCAKEGDVEDAEKTWLRLLESDNGIP-TPAFVYKMEAYAKIGEFMKSLEIFREMQERLGS 399
V +G ++ EK W S P T F + AY K + K + M++
Sbjct: 281 VFGNKGQIDLMEK-WYEKFRSFGIEPETRTFNILIGAYGKKRMYDKMSSVMEFMRKLQFP 339
Query: 400 ASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLA 459
+ Y+ +IE A + + E + GMK ++ L N Y N G+ ++ +
Sbjct: 340 WTTSTYNNVIEAFAVAGDVKHMEYTFDQMRAEGMKADTKTFCCLINGYANAGLFHKVISS 399
Query: 460 FSECLEKCRP-NRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYL 518
+ P N T Y + + A ++ + E +F M +Q ++ + +I++ AY
Sbjct: 400 VQLATKFEIPENTTFYNAIISACAKAEDLMEMERVFKRMKDNQ-CQPDSTTYSIMVEAYK 458
Query: 519 SSG 521
G
Sbjct: 459 REG 461
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 84/452 (18%), Positives = 185/452 (40%), Gaps = 72/452 (15%)
Query: 188 DYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQL 247
D + K R+ ++FD+++ +G VPS +T++ LI A QG + +A ++++M+
Sbjct: 159 DGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINA---CRFQGTVAKAQEVWDQMVA- 214
Query: 248 GGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSY 307
P + ++ AL + + AE +F + +G++ + Y+ L+ H
Sbjct: 215 QQIDPNVVTYTTMICALCEEG------CIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ 268
Query: 308 QDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPT 367
+D+++ + L +E+ ++G + +++ K +A+ +L +
Sbjct: 269 RDDVNSAVV--LYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTV 326
Query: 368 PAFVYKMEAYAKIGEFMKSLEIFREMQERLG------SASVPAYHKIIELLCKAEETELT 421
P + M+ + G ++L +++EM RLG + S+ ++ LC + +
Sbjct: 327 PVYNSLMDGAFRSGNAQEALALYQEMT-RLGLCPDEFTCSI-----VVRGLCDGGQMHVA 380
Query: 422 ESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE----KCRPNRTIYGIY 477
+ ++ E G+ +Y L + Y +G L A + C PN Y
Sbjct: 381 DRFLQGVQEDGVNLNAAAYNALIDEYCRIG---NLEEALATCTRMTEVGIEPNVVSYSSL 437
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKK 537
++ G ++ A I+ M + + I N + ++ + +G
Sbjct: 438 IDGHSKRGKMQIAMAIYTEMVA-KGIEPNVVTYTALIHGHAKNGG--------------- 481
Query: 538 YEIESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIR 597
+D L+++ ++ +S N + + +L+ GLC E R + +R
Sbjct: 482 ----------IDAAFRLHKEMIENGISPNAIT------VSVLVDGLC---RENRVQEAVR 522
Query: 598 FQFN----ENSRMHSVLRRYLYDQYHEWLHPS 625
F + S +HSV + ++ E L P+
Sbjct: 523 FVMEYSGLKCSDIHSVFSNFTIEE--ECLIPN 552
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 5/173 (2%)
Query: 359 LESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEET 418
L S + P PA + A +++G ++L +FR ++ ++PA + +++ L KA
Sbjct: 111 LSSTSTTPAPALGVLVIALSQMGLLDEALYVFRRLRTL---PALPACNAVLDGLVKARRP 167
Query: 419 ELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECL-EKCRPNRTIYGIY 477
L E + G+ P + +Y L N G + + + + ++ PN Y
Sbjct: 168 GCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTM 227
Query: 478 LESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIY 530
+ +L G I AE +F+ M + + N + N+++S + D A +Y
Sbjct: 228 ICALCEEGCIGDAERLFDAM-KEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLY 279
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 143/350 (40%), Gaps = 35/350 (10%)
Query: 190 MGKERKFAKCRDIFDDIINQGRVPSEMTFH-----------ILIVAYLSAPV--QGCLDE 236
MG E D+ + GR+ H LI YL + G +DE
Sbjct: 264 MGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDE 323
Query: 237 ACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKD 296
A ++ +++ P L+N+L V +S + + + ++ N++ +G E
Sbjct: 324 ARAMLSKI-----PNPNTVLYNTLINGYV-----VSGRFEEAKDLLYKNMVIAGFEPDAF 373
Query: 297 IYSGLIWLHSYQDNIDKER--ISLLK--KEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
++ +I D + K+ +S L+ EM + GFE ++ K+G E+A
Sbjct: 374 TFNIMI------DGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEAS 427
Query: 353 KTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELL 412
K + + T + + A K G+ +L+++ EM + + ++ +I L
Sbjct: 428 KVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGL 487
Query: 413 CKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSEC-LEKCRPNR 471
CK ++ E L ++ + G+ +Y L + +L L + + E C +
Sbjct: 488 CKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDN 547
Query: 472 TIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSG 521
Y +++L G EK + M ++ I + SCNI+++++ +G
Sbjct: 548 ITYNGLIKALCKTGATEKCLGLIEQMFGEE-IFPSINSCNILINSFCRTG 596
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 166/431 (38%), Gaps = 49/431 (11%)
Query: 162 TGFRVYEWMMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHIL 221
T ++E Q Y F + L D +G +F + + ++G V E F ++
Sbjct: 76 TSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILI 135
Query: 222 IVAYLSAPVQG-------------CLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKP 268
+ Y A + G C + YN ++++ P + ++F ++S+
Sbjct: 136 MRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSR- 194
Query: 269 GGLS----KYYLQQAEFIFHNLLTSGLEIQKD-----------IYSGLIWLHSYQDNIDK 313
G+S + + F N + S + +D IY LI H+ +N
Sbjct: 195 -GISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLI--HALSENNRV 251
Query: 314 ERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK 373
L +EM G E + V+ K G + +A K R+L D Y
Sbjct: 252 NEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYL 311
Query: 374 MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIE-LLCKAEETELTESLMKEFVETG 432
M ++G+ ++ R M ++ + + Y+ +I + E + L K V G
Sbjct: 312 MHGLCRMGKVDEA----RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAG 367
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLA-----FSECLEKC-RPNRTIYGIYLESLKNAGN 486
+P ++ N+ ++ G+ + +L E ++K PN Y I ++ G+
Sbjct: 368 FEPDAFTF----NIMID-GLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGH 422
Query: 487 IEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEIESAWME 546
E+A ++ N M S + + +NT N ++ A G A ++Y M K + +
Sbjct: 423 FEEASKVVNSM-SAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFN 481
Query: 547 KLDYVLSLNRK 557
L Y L N K
Sbjct: 482 SLIYGLCKNDK 492
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 124/290 (42%), Gaps = 21/290 (7%)
Query: 213 PSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLS 272
P+ TF I+I + G LD A ++ M ++G +P L+N+L L +
Sbjct: 322 PNSTTFSIVINGLIKT---GDLDLAVGLFRDMARIG-CKPDLLLYNNLIDGLCTS----- 372
Query: 273 KYYLQQAEFIFHNLLTSGLE----IQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGF 328
LQ++ + + SG+E I+ L H + LLKK M+ G
Sbjct: 373 -NRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISG-----ALHLLKK-MRIHGH 425
Query: 329 EEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLE 388
+ S+++ K G +A K + + E A+ ++ KI E ++L+
Sbjct: 426 VPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALK 485
Query: 389 IFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYL 448
+F+++ + V AY+ +I+ LCK + ++L+ E E G+ P +Y L +
Sbjct: 486 LFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLC 545
Query: 449 NLGMHDRLHLAFSECLEKCR-PNRTIYGIYLESLKNAGNIEKAEEIFNHM 497
+ L S +EK R PN Y + L NAG + A ++N M
Sbjct: 546 KTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEM 595
>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 24/267 (8%)
Query: 277 QQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLL 336
+A +F ++ +G + +++ + L+S + + + + K+M + G V
Sbjct: 153 HEAIQVFEHMRVNGF--RPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYN 210
Query: 337 SVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQ 394
+L C K GDVE AEK L +E P F Y + Y K G ++L + M+
Sbjct: 211 VLLHACCKSGDVEKAEKV-LSEMELKCVFP-DLFTYNTLISLYCKKGMHYEALSVQDRME 268
Query: 395 ERLGSASVPAYHKIIELLCKAEETELTESLMKEFVET--GMKPLMPSYINLTNM---YLN 449
S + Y+ +I C+ E M+E V+ +K + P+++ T++ Y
Sbjct: 269 MAGISPDIFTYNSLIYGFCR-------EGRMREAVQLFRDIKDVTPNHVTYTSLIDGYCR 321
Query: 450 LGMHD---RLHLAFSECLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVN 506
+ D RL SE + P Y L L G + A + N M S++ I +
Sbjct: 322 VNDLDEALRLKEVMSE--KGLYPTVITYNSILRKLCEGGRLRDANILLNEM-SERKIEPD 378
Query: 507 TRSCNIILSAYLSSGDFVKAEKIYDLM 533
+CN +++AY GD A K+ D M
Sbjct: 379 NVTCNTLINAYCKIGDMRSALKVKDKM 405
>gi|359491272|ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 2/174 (1%)
Query: 344 KEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVP 403
+ G +++A + +L++ + I + + + GE K+ +F EM SV
Sbjct: 211 RAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVA 270
Query: 404 AYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLG-MHDRLHLAFSE 462
Y+ I++LCK + E S+ +E + G P +Y + ++G M +
Sbjct: 271 TYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARM 330
Query: 463 CLEKCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSA 516
++C PN IY + + +A IEK +F M D N + NI++SA
Sbjct: 331 KDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKM-GDADCLPNLDTYNILISA 383
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 57/137 (41%), Gaps = 15/137 (10%)
Query: 366 PTP-AFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESL 424
P P F E Y G+ ++++IF M E + +++ I+++LCK++ E+ ++
Sbjct: 134 PNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNK 193
Query: 425 MKEFVETGMKPLMPSYINLTNMY----LNLGMHDRLHLAFSECLEKCRPNRTIYGIYLES 480
+ + + L+ + + L M R KC + Y +
Sbjct: 194 LFKVFRGRFRILLKGFFRAGQLKEAWEFFLQMKKR----------KCEIDVVTYTTVVHG 243
Query: 481 LKNAGNIEKAEEIFNHM 497
AG + KA+ +FN M
Sbjct: 244 FGVAGEVRKAQRVFNEM 260
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 124/315 (39%), Gaps = 51/315 (16%)
Query: 134 ILNAQKKW-LRQEDGTY--LAVHCMRIRENETGFRVYEWMMQQHWYRFDFALATKLADYM 190
+ +A KW LR +Y L +R+ + + GFR+ M+ + D + L + +
Sbjct: 164 VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG-VQPDVYTYSVLINGL 222
Query: 191 GKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGY 250
KE K +FD+++ +G VP+ +TF LI + G +D A IY +M
Sbjct: 223 CKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCK---NGRVDLAMEIYKQM------ 273
Query: 251 QPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDN 310
L SL L++ +N L GL + D L D
Sbjct: 274 -----LSQSLLPDLIT-----------------YNTLIYGLCKKGD-------LKQAHDL 304
Query: 311 IDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAF 370
ID EM G + K +++ C KEGD++ A + R+++ + + A+
Sbjct: 305 ID---------EMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 355
Query: 371 VYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVE 430
+ + G + + ++ REM Y I+ CK + L+KE
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQR 415
Query: 431 TGMKPLMPSYINLTN 445
G P + +Y L N
Sbjct: 416 DGHAPSVVTYNVLMN 430
>gi|255557939|ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540762|gb|EEF42322.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 145/344 (42%), Gaps = 28/344 (8%)
Query: 198 KCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRPSLH 257
K + D+ + G PS +++ LI LS G EA ++Y M+ G +PR L+
Sbjct: 39 KAMTLLADMQSLGFHPSSLSYTCLIETLLSV---GRTLEAEALYQEMMCFG-LKPRLKLY 94
Query: 258 NSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSGLIWLHSYQDNIDK-ERI 316
N + R G L K L+ AE + L GL ++ Y L+ Y N + E
Sbjct: 95 NIMLR------GFLKKGLLRVAERVLRILDDLGLHRNQETYEILL---DYNVNAGRLEDT 145
Query: 317 SLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLES--DNGIPTPAFVYK- 373
+ EM+Q GF+ V V+ + G + A + ++E + G+P +Y
Sbjct: 146 WSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKA----IGIIEEIREMGMPLDKHIYNS 201
Query: 374 -MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETG 432
++ + K GE ++LE+ MQ++ + + ++ +I CKA L + G
Sbjct: 202 IIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFSKMQAQG 261
Query: 433 MKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKC---RPNRTIYGIYLESLKNAGNIEK 489
+ P + + + G + + F + K + + IY I ++ G +
Sbjct: 262 LYPDPKILVTIISRLAEQGKWNIIRENFD--IMKSWGYKKSGAIYAILVDIYGQYGRFQD 319
Query: 490 AEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM 533
AEE + + S+ + + C ++ +AY G + K+ LM
Sbjct: 320 AEECISALKSEGILPSASMFC-VLANAYAQQGLCEQTVKVLQLM 362
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 114/264 (43%), Gaps = 24/264 (9%)
Query: 178 FDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEA 237
D + + D GK + + ++ ++ QG P +T++ LI + A G L +A
Sbjct: 194 LDKHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKA---GNLSKA 250
Query: 238 CSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS-GLEIQKD 296
++++M Q G P P + ++S+ K+ + + F +++ S G +
Sbjct: 251 LELFSKM-QAQGLYPDP----KILVTIISRLAEQGKWNIIRENF---DIMKSWGYKKSGA 302
Query: 297 IYSGLIWLHS----YQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAE 352
IY+ L+ ++ +QD +E IS LK E G + + A++G E
Sbjct: 303 IYAILVDIYGQYGRFQDA--EECISALKSE----GILPSASMFCVLANAYAQQGLCEQTV 356
Query: 353 KTWLRLLESDNGIPTPAFV-YKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIEL 411
K L+L+E++ P + + A+ G ++L I+ M+E S V Y +++
Sbjct: 357 KV-LQLMEAEGIEPNLIMLNVLINAFGIAGRHREALSIYHHMKESGISPDVVTYSTLMKA 415
Query: 412 LCKAEETELTESLMKEFVETGMKP 435
+A + + + E +G P
Sbjct: 416 YIRARKFDEVPEIYSEMESSGCTP 439
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 139/338 (41%), Gaps = 25/338 (7%)
Query: 170 MMQQHWYRFDFALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAP 229
M+Q + A + +G + + IF+++ G +P ++ L+ Y+
Sbjct: 281 MVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKT- 339
Query: 230 VQGCLDEACSIYNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTS 289
G L +A SI + M + G+ P ++ L A + + A + + S
Sbjct: 340 --GSLKDAESIVSEM-ERSGFSPDEHTYSLLIDAYANAG------RWESARIVLKEMEAS 390
Query: 290 GLEIQKDIYSGLIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVE 349
G+ ++S + L SY+D ++ + +EM+ +G + ++ K ++
Sbjct: 391 GVRPNSYVFSRI--LASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLD 448
Query: 350 DAEKTWLRLLESDNGIPTPAFVYK--MEAYAKIGEFMKSLEIFREMQERLGSASVPAYHK 407
A T+ R+ G+ A + ++ + K G K+ E+F MQE S Y+
Sbjct: 449 HALATFDRM--RMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNI 506
Query: 408 IIELLCKAEETELTESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLE-- 465
+I + E E ++L+ + G+ + +Y L ++Y G R A ECLE
Sbjct: 507 MINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIY---GQSGRFKDAI-ECLEVM 562
Query: 466 ---KCRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSD 500
+P+ T+Y + + G E+A F M +D
Sbjct: 563 KSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRAD 600
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 87/226 (38%), Gaps = 9/226 (3%)
Query: 323 MQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLESDNGIPTPAFVYKMEAYAKIGE 382
+Q G L++V+ G E+AE + L E T A+ ++ Y K G
Sbjct: 282 VQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGS 341
Query: 383 FMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETELTESLMKEFVETGMKPLMPSYIN 442
+ I EM+ S Y +I+ A E ++KE +G++P +
Sbjct: 342 LKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSR 401
Query: 443 LTNMYLNLGMHDRLHLAFSECLEK-CRPNRTIYGIYLESLKNAGNIEKAEEIFNHMHSDQ 501
+ Y + G + E P+R Y + +++ ++ A F+ M +
Sbjct: 402 ILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRM-E 460
Query: 502 TIGVNTRSCNIILSAYLSSGDFVKAEKIYDLM-------CLKKYEI 540
+ + + N ++ + SG KAE++++ M C Y I
Sbjct: 461 GVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNI 506
>gi|18654274|gb|AAL77574.1|L43542_1 unknown [Trebouxia aggregata]
gi|162134341|gb|ABX82628.1| putative site-specific DNA endonuclease [Trebouxia aggregata]
gi|255653895|gb|ACU25398.1| hypothetical protein [Trebouxia arboricola]
Length = 210
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 55/127 (43%), Gaps = 38/127 (29%)
Query: 571 QRENLIGLLLGGLCIESDEKRKRHMIRFQFNENSRMHSVLRRYLYDQYHEWLH--PSFK- 627
Q+E L G++LG +E+ R + ++F E S H +LY+ + ++ P K
Sbjct: 11 QKEVLFGVILGDAHLETQNNRITYRVKF---EQSIKHKPYIEHLYEIFKNYVKTPPQLKL 67
Query: 628 --------------------------------FWPKGRLVIPKLIHRWLTPRALAYWFMY 655
F+ + + VIPKLIHRWLTPRALAYW+M
Sbjct: 68 VKYKNNDTKDKKSTNIRFATISSSTFTFFGKQFYKEKKKVIPKLIHRWLTPRALAYWYMD 127
Query: 656 GGHRTSV 662
G S
Sbjct: 128 DGSTKST 134
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,076,921,140
Number of Sequences: 23463169
Number of extensions: 519544099
Number of successful extensions: 1325480
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 3929
Number of HSP's that attempted gapping in prelim test: 1297583
Number of HSP's gapped (non-prelim): 19264
length of query: 761
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 610
effective length of database: 8,816,256,848
effective search space: 5377916677280
effective search space used: 5377916677280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)