Query 004334
Match_columns 760
No_of_seqs 528 out of 3808
Neff 6.2
Searched_HMMs 46136
Date Thu Mar 28 21:38:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004334.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004334hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0661 AarF Predicted unusual 100.0 3.4E-82 7.4E-87 718.0 50.7 381 221-632 53-440 (517)
2 PRK04750 ubiB putative ubiquin 100.0 2E-81 4.4E-86 716.1 54.8 410 224-671 50-471 (537)
3 TIGR01982 UbiB 2-polyprenylphe 100.0 2.7E-74 5.9E-79 648.5 41.4 377 224-631 48-431 (437)
4 KOG1235 Predicted unusual prot 100.0 7.3E-64 1.6E-68 566.3 38.2 376 224-624 92-485 (538)
5 KOG1236 Predicted unusual prot 100.0 5.4E-54 1.2E-58 460.7 29.0 372 223-623 118-555 (565)
6 KOG1234 ABC (ATP binding casse 100.0 1.1E-33 2.4E-38 291.1 16.1 342 247-617 2-352 (363)
7 PF03109 ABC1: ABC1 family; I 99.9 1.3E-23 2.9E-28 196.8 7.6 112 283-397 1-119 (119)
8 cd05145 RIO1_like RIO kinase f 99.8 7.9E-19 1.7E-23 176.6 14.7 180 299-507 3-187 (190)
9 KOG0595 Serine/threonine-prote 99.8 2.2E-18 4.7E-23 186.4 16.9 187 299-532 16-210 (429)
10 cd05147 RIO1_euk RIO kinase fa 99.8 7.4E-18 1.6E-22 170.2 16.0 164 299-483 3-170 (190)
11 smart00090 RIO RIO-like kinase 99.7 1.9E-16 4.2E-21 165.4 14.5 186 299-515 34-226 (237)
12 KOG0616 cAMP-dependent protein 99.7 1.1E-15 2.4E-20 159.8 17.9 189 294-533 44-238 (355)
13 cd05144 RIO2_C RIO kinase fami 99.7 9.4E-16 2E-20 154.8 16.9 170 298-497 20-196 (198)
14 PRK10359 lipopolysaccharide co 99.7 6.6E-16 1.4E-20 160.3 14.8 141 299-483 37-187 (232)
15 KOG0581 Mitogen-activated prot 99.7 6.6E-16 1.4E-20 165.9 14.3 177 299-528 85-269 (364)
16 KOG0192 Tyrosine kinase specif 99.7 1.5E-15 3.2E-20 167.8 16.2 185 300-530 48-240 (362)
17 KOG0592 3-phosphoinositide-dep 99.6 1E-15 2.3E-20 170.3 14.0 233 299-601 79-323 (604)
18 KOG0605 NDR and related serine 99.6 2.6E-15 5.6E-20 167.2 15.3 196 295-534 142-386 (550)
19 cd05119 RIO RIO kinase family, 99.6 5.3E-15 1.1E-19 146.9 15.1 164 299-489 3-173 (187)
20 KOG4250 TANK binding protein k 99.6 1.7E-15 3.6E-20 173.1 11.6 193 294-534 14-222 (732)
21 KOG0598 Ribosomal protein S6 k 99.6 3.6E-15 7.8E-20 160.2 13.5 191 294-532 25-221 (357)
22 cd05628 STKc_NDR1 Catalytic do 99.6 8.8E-15 1.9E-19 160.9 15.7 190 299-531 7-231 (363)
23 PRK14879 serine/threonine prot 99.6 2.1E-14 4.6E-19 145.3 15.9 144 299-482 2-146 (211)
24 KOG0615 Serine/threonine prote 99.6 1.3E-15 2.7E-20 165.1 7.1 194 298-533 177-378 (475)
25 KOG4236 Serine/threonine prote 99.6 2.2E-15 4.8E-20 166.3 9.1 196 288-530 559-760 (888)
26 PTZ00263 protein kinase A cata 99.6 1.4E-14 3.1E-19 157.1 15.2 183 299-531 24-210 (329)
27 KOG0694 Serine/threonine prote 99.6 1.7E-14 3.6E-19 164.7 15.9 230 299-603 374-606 (694)
28 KOG0661 MAPK related serine/th 99.6 2.9E-15 6.3E-20 164.7 8.9 184 299-529 16-203 (538)
29 cd05600 STKc_Sid2p_Dbf2p Catal 99.6 7.5E-15 1.6E-19 159.1 12.0 182 299-531 7-193 (333)
30 KOG0583 Serine/threonine prote 99.6 1.7E-14 3.8E-19 160.0 14.8 187 299-532 23-219 (370)
31 cd05593 STKc_PKB_gamma Catalyt 99.6 1.6E-14 3.5E-19 156.8 14.0 185 300-531 2-190 (328)
32 KOG0575 Polo-like serine/threo 99.6 3.5E-14 7.7E-19 160.3 17.0 184 299-530 24-212 (592)
33 cd05627 STKc_NDR2 Catalytic do 99.6 1E-14 2.2E-19 160.1 12.0 189 299-530 7-230 (360)
34 cd05590 STKc_nPKC_eta Catalyti 99.6 1.8E-14 3.8E-19 155.8 13.3 185 300-531 2-191 (320)
35 cd05571 STKc_PKB Catalytic dom 99.6 1.4E-14 3.1E-19 156.5 12.5 184 300-530 2-189 (323)
36 cd05626 STKc_LATS2 Catalytic d 99.6 1.7E-14 3.6E-19 159.9 13.0 190 299-531 7-243 (381)
37 cd05599 STKc_NDR_like Catalyti 99.6 2E-14 4.4E-19 157.5 13.4 190 299-531 7-234 (364)
38 cd05084 PTKc_Fes Catalytic dom 99.6 3.8E-14 8.3E-19 146.2 14.4 186 299-530 1-190 (252)
39 cd05612 STKc_PRKX_like Catalyt 99.6 3.3E-14 7.2E-19 151.1 14.3 181 299-531 7-193 (291)
40 cd05631 STKc_GRK4 Catalytic do 99.6 5.5E-14 1.2E-18 148.9 15.8 186 299-531 6-196 (285)
41 cd05608 STKc_GRK1 Catalytic do 99.6 6.2E-14 1.3E-18 148.1 16.0 185 301-531 1-192 (280)
42 cd05591 STKc_nPKC_epsilon Cata 99.6 2.9E-14 6.2E-19 153.9 13.7 184 300-531 2-191 (321)
43 cd05616 STKc_cPKC_beta Catalyt 99.5 5.3E-14 1.2E-18 152.0 15.3 187 299-531 6-196 (323)
44 cd05587 STKc_cPKC Catalytic do 99.5 4.3E-14 9.3E-19 152.8 14.4 185 299-531 6-196 (324)
45 cd05595 STKc_PKB_beta Catalyti 99.5 2.6E-14 5.7E-19 154.6 12.7 185 300-531 2-190 (323)
46 cd05598 STKc_LATS Catalytic do 99.5 2E-14 4.3E-19 158.5 11.9 192 299-531 7-239 (376)
47 TIGR03724 arch_bud32 Kae1-asso 99.5 7.6E-14 1.6E-18 140.2 15.0 141 301-483 2-142 (199)
48 cd05592 STKc_nPKC_theta_delta 99.5 4.8E-14 1E-18 152.2 14.5 184 300-531 2-191 (316)
49 cd05085 PTKc_Fer Catalytic dom 99.5 8.1E-14 1.7E-18 143.4 15.5 185 299-530 1-188 (250)
50 cd05096 PTKc_DDR1 Catalytic do 99.5 7.4E-14 1.6E-18 148.9 15.5 185 299-530 11-234 (304)
51 cd05624 STKc_MRCK_beta Catalyt 99.5 4.7E-14 1E-18 153.2 14.1 188 299-531 7-203 (331)
52 cd05604 STKc_SGK3 Catalytic do 99.5 4.1E-14 9E-19 152.9 13.5 185 300-530 2-190 (325)
53 KOG0593 Predicted protein kina 99.5 1.1E-13 2.4E-18 145.2 16.1 184 300-530 9-196 (396)
54 cd05585 STKc_YPK1_like Catalyt 99.5 5.4E-14 1.2E-18 151.2 14.2 184 301-531 1-188 (312)
55 cd05589 STKc_PKN Catalytic dom 99.5 4.2E-14 9.2E-19 152.8 13.2 187 299-530 5-195 (324)
56 cd05594 STKc_PKB_alpha Catalyt 99.5 2.9E-14 6.4E-19 154.1 11.8 184 300-530 2-190 (325)
57 cd05602 STKc_SGK1 Catalytic do 99.5 3.8E-14 8.3E-19 153.2 12.7 184 300-530 2-190 (325)
58 cd05615 STKc_cPKC_alpha Cataly 99.5 4.6E-14 1E-18 152.7 13.2 185 299-531 6-196 (323)
59 PF01163 RIO1: RIO1 family; I 99.5 1.5E-13 3.3E-18 138.8 15.9 176 309-513 2-182 (188)
60 cd05620 STKc_nPKC_delta Cataly 99.5 6.3E-14 1.4E-18 151.2 14.0 184 300-531 2-191 (316)
61 cd05597 STKc_DMPK_like Catalyt 99.5 8.4E-14 1.8E-18 151.2 15.0 186 299-531 7-203 (331)
62 PTZ00426 cAMP-dependent protei 99.5 8.9E-14 1.9E-18 152.2 15.1 181 299-531 36-223 (340)
63 cd05601 STKc_CRIK Catalytic do 99.5 2E-14 4.4E-19 155.4 9.8 185 299-530 7-203 (330)
64 cd05575 STKc_SGK Catalytic dom 99.5 6.4E-14 1.4E-18 151.3 13.6 186 300-531 2-191 (323)
65 cd05617 STKc_aPKC_zeta Catalyt 99.5 6.6E-14 1.4E-18 151.8 13.7 184 300-531 2-191 (327)
66 cd05102 PTKc_VEGFR3 Catalytic 99.5 1.2E-13 2.6E-18 149.7 15.7 187 299-530 13-270 (338)
67 KOG0032 Ca2+/calmodulin-depend 99.5 4.1E-14 8.8E-19 157.5 12.3 190 299-534 41-236 (382)
68 KOG0574 STE20-like serine/thre 99.5 3.1E-15 6.8E-20 156.1 3.2 197 276-528 18-221 (502)
69 cd05618 STKc_aPKC_iota Catalyt 99.5 7.9E-14 1.7E-18 151.4 14.2 185 300-531 2-191 (329)
70 cd05588 STKc_aPKC Catalytic do 99.5 9.6E-14 2.1E-18 150.6 14.8 183 300-531 2-191 (329)
71 cd05573 STKc_ROCK_NDR_like Cat 99.5 3.2E-14 7E-19 154.5 11.1 190 299-531 7-225 (350)
72 cd05629 STKc_NDR_like_fungal C 99.5 7.1E-14 1.5E-18 154.3 13.7 190 299-531 7-243 (377)
73 cd05622 STKc_ROCK1 Catalytic d 99.5 8.8E-14 1.9E-18 154.0 14.4 184 299-531 49-242 (371)
74 cd05621 STKc_ROCK2 Catalytic d 99.5 6.6E-14 1.4E-18 155.0 13.4 185 299-531 49-242 (370)
75 KOG0585 Ca2+/calmodulin-depend 99.5 2E-13 4.4E-18 150.2 16.8 203 299-530 103-313 (576)
76 cd05603 STKc_SGK2 Catalytic do 99.5 6.5E-14 1.4E-18 151.0 12.6 185 300-530 2-190 (321)
77 cd05625 STKc_LATS1 Catalytic d 99.5 5.5E-14 1.2E-18 155.5 12.3 190 299-531 7-243 (382)
78 KOG0597 Serine-threonine prote 99.5 5.5E-14 1.2E-18 156.8 12.0 182 299-529 8-193 (808)
79 cd05614 STKc_MSK2_N N-terminal 99.5 1.1E-13 2.3E-18 149.9 14.1 189 299-531 6-202 (332)
80 cd07878 STKc_p38beta_MAPK11 Ca 99.5 7.9E-14 1.7E-18 151.6 12.6 198 282-531 3-211 (343)
81 KOG0577 Serine/threonine prote 99.5 2.2E-14 4.8E-19 160.3 8.2 188 285-525 20-214 (948)
82 KOG0600 Cdc2-related protein k 99.5 5.8E-14 1.3E-18 155.5 11.4 193 290-530 116-314 (560)
83 PLN00034 mitogen-activated pro 99.5 8.4E-14 1.8E-18 152.4 12.5 181 299-530 80-267 (353)
84 cd06657 STKc_PAK4 Catalytic do 99.5 1.4E-13 3.1E-18 146.7 13.7 181 299-530 26-210 (292)
85 cd05623 STKc_MRCK_alpha Cataly 99.5 2.1E-13 4.5E-18 148.0 14.6 186 299-531 7-203 (332)
86 cd06649 PKc_MEK2 Catalytic dom 99.5 2.7E-13 5.8E-18 147.1 15.2 182 299-531 11-197 (331)
87 cd05596 STKc_ROCK Catalytic do 99.5 1.3E-13 2.7E-18 152.6 12.8 185 299-531 49-242 (370)
88 cd05584 STKc_p70S6K Catalytic 99.5 1.8E-13 3.9E-18 148.0 13.7 187 299-531 2-195 (323)
89 PRK09188 serine/threonine prot 99.5 2.7E-13 5.8E-18 150.0 15.2 139 298-483 23-165 (365)
90 cd05122 PKc_STE Catalytic doma 99.5 6.2E-13 1.3E-17 135.2 16.4 183 299-531 6-192 (253)
91 cd07862 STKc_CDK6 Catalytic do 99.5 3.9E-13 8.4E-18 141.8 15.2 187 299-530 7-203 (290)
92 KOG1187 Serine/threonine prote 99.5 1.4E-13 3.1E-18 152.3 12.3 200 269-531 62-273 (361)
93 cd06635 STKc_TAO1 Catalytic do 99.5 1.2E-12 2.6E-17 140.9 19.2 199 280-531 14-219 (317)
94 cd06642 STKc_STK25-YSK1 Cataly 99.5 3.1E-13 6.7E-18 141.8 14.1 187 290-530 3-195 (277)
95 cd07848 STKc_CDKL5 Catalytic d 99.5 2.1E-13 4.6E-18 143.6 12.8 186 299-531 7-196 (287)
96 cd05607 STKc_GRK7 Catalytic do 99.5 5.8E-13 1.3E-17 140.5 16.0 183 301-531 1-189 (277)
97 KOG0667 Dual-specificity tyros 99.5 1.8E-13 4E-18 155.8 12.7 185 299-531 192-383 (586)
98 cd05632 STKc_GRK5 Catalytic do 99.5 7E-13 1.5E-17 140.4 16.1 186 299-531 6-196 (285)
99 cd07874 STKc_JNK3 Catalytic do 99.5 2.1E-13 4.5E-18 149.1 12.3 194 286-531 9-213 (355)
100 cd05619 STKc_nPKC_theta Cataly 99.5 3.2E-13 6.9E-18 145.9 13.4 184 300-531 2-191 (316)
101 cd05605 STKc_GRK4_like Catalyt 99.5 7.2E-13 1.6E-17 140.3 15.8 186 299-531 6-196 (285)
102 KOG0578 p21-activated serine/t 99.5 2.5E-13 5.5E-18 152.4 12.7 191 288-531 270-464 (550)
103 KOG0612 Rho-associated, coiled 99.5 2E-13 4.4E-18 162.1 12.3 118 404-530 150-275 (1317)
104 cd05082 PTKc_Csk Catalytic dom 99.5 8.6E-13 1.9E-17 136.7 15.5 179 299-530 12-193 (256)
105 cd07871 STKc_PCTAIRE3 Catalyti 99.5 4.6E-13 1E-17 142.0 13.6 182 299-531 11-199 (288)
106 cd00192 PTKc Catalytic domain 99.5 8.4E-13 1.8E-17 135.5 15.1 187 299-531 1-202 (262)
107 cd05570 STKc_PKC Catalytic dom 99.5 3.9E-13 8.3E-18 145.1 13.2 184 300-531 2-191 (318)
108 PF00069 Pkinase: Protein kina 99.5 3.5E-13 7.6E-18 138.8 12.2 185 299-531 5-194 (260)
109 PTZ00267 NIMA-related protein 99.5 5.2E-13 1.1E-17 152.9 14.8 185 298-531 72-266 (478)
110 cd06629 STKc_MAPKKK_Bck1_like 99.5 1E-12 2.2E-17 137.2 15.7 200 293-531 1-207 (272)
111 cd05104 PTKc_Kit Catalytic dom 99.5 9.7E-13 2.1E-17 145.8 16.2 86 439-530 225-310 (375)
112 KOG0660 Mitogen-activated prot 99.5 1.4E-13 3E-18 147.7 9.0 193 298-532 27-224 (359)
113 cd05582 STKc_RSK_N N-terminal 99.5 3.3E-13 7.1E-18 145.4 11.8 182 299-530 2-192 (318)
114 PRK13184 pknD serine/threonine 99.5 5.9E-13 1.3E-17 160.7 15.2 193 299-531 8-226 (932)
115 cd05630 STKc_GRK6 Catalytic do 99.4 1.4E-12 3E-17 138.3 16.2 186 299-531 6-196 (285)
116 cd05115 PTKc_Zap-70 Catalytic 99.4 1.2E-12 2.5E-17 136.5 15.4 185 300-530 2-192 (257)
117 cd05586 STKc_Sck1_like Catalyt 99.4 3E-13 6.5E-18 146.4 11.3 184 301-530 1-191 (330)
118 cd08529 STKc_FA2-like Catalyti 99.4 2.2E-12 4.8E-17 132.8 17.1 186 299-531 6-196 (256)
119 cd06650 PKc_MEK1 Catalytic dom 99.4 1.1E-12 2.3E-17 142.8 15.5 182 299-531 11-197 (333)
120 cd07875 STKc_JNK1 Catalytic do 99.4 4E-13 8.7E-18 147.5 12.2 189 292-531 22-220 (364)
121 KOG0582 Ste20-like serine/thre 99.4 5.2E-13 1.1E-17 146.2 12.7 187 299-529 32-225 (516)
122 cd06640 STKc_MST4 Catalytic do 99.4 1.3E-12 2.8E-17 137.4 15.3 182 299-530 10-195 (277)
123 cd06627 STKc_Cdc7_like Catalyt 99.4 1.7E-12 3.7E-17 133.0 15.8 184 299-530 6-193 (254)
124 KOG0659 Cdk activating kinase 99.4 6.9E-13 1.5E-17 137.4 12.6 186 298-530 7-196 (318)
125 cd05580 STKc_PKA Catalytic dom 99.4 1.8E-12 4E-17 137.3 16.3 183 299-531 7-193 (290)
126 KOG0663 Protein kinase PITSLRE 99.4 1.7E-13 3.7E-18 145.4 8.3 186 299-531 82-273 (419)
127 cd07869 STKc_PFTAIRE1 Catalyti 99.4 5.4E-13 1.2E-17 142.4 12.2 184 299-531 11-199 (303)
128 PTZ00283 serine/threonine prot 99.4 5.7E-13 1.2E-17 153.5 13.3 189 299-531 38-240 (496)
129 cd06917 STKc_NAK1_like Catalyt 99.4 1.6E-12 3.4E-17 136.1 15.5 185 299-531 7-197 (277)
130 KOG0193 Serine/threonine prote 99.4 2.4E-13 5.2E-18 153.3 9.7 193 289-531 387-588 (678)
131 cd06605 PKc_MAPKK Catalytic do 99.4 1.3E-12 2.9E-17 135.3 14.6 183 299-531 7-194 (265)
132 cd05064 PTKc_EphR_A10 Catalyti 99.4 1.3E-12 2.9E-17 136.6 14.7 184 299-529 11-201 (266)
133 cd06628 STKc_MAPKKK_Byr2_like 99.4 1.6E-12 3.4E-17 135.2 14.9 197 299-531 6-207 (267)
134 KOG0594 Protein kinase PCTAIRE 99.4 1.1E-12 2.4E-17 140.7 13.9 184 300-530 18-215 (323)
135 cd05068 PTKc_Frk_like Catalyti 99.4 1.2E-12 2.6E-17 135.9 13.7 184 299-531 12-199 (261)
136 cd05041 PTKc_Fes_like Catalyti 99.4 1.7E-12 3.7E-17 133.6 14.7 187 299-531 1-190 (251)
137 cd07859 STKc_TDY_MAPK_plant Ca 99.4 8E-13 1.7E-17 142.5 12.6 188 299-531 6-203 (338)
138 cd05633 STKc_GRK3 Catalytic do 99.4 2.9E-12 6.2E-17 135.5 16.4 184 300-531 1-191 (279)
139 cd06631 STKc_YSK4 Catalytic do 99.4 1.7E-12 3.6E-17 135.0 14.4 194 299-531 6-203 (265)
140 cd05609 STKc_MAST Catalytic do 99.4 1.4E-12 3E-17 139.4 14.1 189 299-530 7-210 (305)
141 cd05040 PTKc_Ack_like Catalyti 99.4 1.8E-12 4E-17 133.9 14.6 185 300-530 2-194 (257)
142 cd06625 STKc_MEKK3_like Cataly 99.4 1.6E-12 3.5E-17 134.6 14.1 191 298-531 7-202 (263)
143 PHA02988 hypothetical protein; 99.4 3.6E-12 7.8E-17 135.4 16.9 186 297-531 24-217 (283)
144 cd05048 PTKc_Ror Catalytic Dom 99.4 2.2E-12 4.7E-17 135.5 15.1 184 299-530 11-220 (283)
145 cd05039 PTKc_Csk_like Catalyti 99.4 3.1E-12 6.7E-17 132.3 15.9 179 299-530 12-193 (256)
146 cd05072 PTKc_Lyn Catalytic dom 99.4 2.1E-12 4.6E-17 133.9 14.7 183 299-530 12-198 (261)
147 cd08224 STKc_Nek6_Nek7 Catalyt 99.4 3E-12 6.4E-17 132.7 15.8 187 299-531 8-201 (267)
148 cd05033 PTKc_EphR Catalytic do 99.4 2.9E-12 6.4E-17 133.4 15.7 187 298-530 9-202 (266)
149 cd07876 STKc_JNK2 Catalytic do 99.4 1.4E-12 3E-17 143.0 13.9 183 298-531 26-217 (359)
150 cd05070 PTKc_Fyn_Yrk Catalytic 99.4 4.6E-12 1E-16 131.5 17.0 183 299-531 12-198 (260)
151 cd06641 STKc_MST3 Catalytic do 99.4 2.9E-12 6.3E-17 134.6 15.7 190 289-530 2-195 (277)
152 cd06656 STKc_PAK3 Catalytic do 99.4 1.7E-12 3.7E-17 138.4 14.0 182 299-531 25-210 (297)
153 cd05112 PTKc_Itk Catalytic dom 99.4 3.6E-12 7.8E-17 131.6 15.8 181 299-530 10-195 (256)
154 cd05063 PTKc_EphR_A2 Catalytic 99.4 2.4E-12 5.2E-17 134.0 14.5 188 298-530 10-204 (268)
155 cd00180 PKc Catalytic domain o 99.4 5.8E-12 1.2E-16 123.0 16.3 180 301-529 1-187 (215)
156 cd05034 PTKc_Src_like Catalyti 99.4 5.5E-12 1.2E-16 130.6 17.0 181 299-530 12-198 (261)
157 cd07863 STKc_CDK4 Catalytic do 99.4 1.8E-12 3.9E-17 136.4 13.6 187 299-530 6-201 (288)
158 KOG1163 Casein kinase (serine/ 99.4 1.1E-12 2.4E-17 134.2 11.3 138 299-482 21-166 (341)
159 smart00219 TyrKc Tyrosine kina 99.4 3.6E-12 7.8E-17 130.9 15.3 183 299-530 5-198 (258)
160 cd05049 PTKc_Trk Catalytic dom 99.4 1.9E-12 4E-17 135.5 13.4 186 299-530 11-218 (280)
161 cd08223 STKc_Nek4 Catalytic do 99.4 3.8E-12 8.2E-17 131.3 15.4 186 299-530 6-196 (257)
162 cd05114 PTKc_Tec_Rlk Catalytic 99.4 3.5E-12 7.6E-17 132.1 15.2 182 299-530 10-195 (256)
163 cd05079 PTKc_Jak1_rpt2 Catalyt 99.4 2.4E-12 5.2E-17 135.8 14.2 189 299-531 10-207 (284)
164 cd06612 STKc_MST1_2 Catalytic 99.4 5.9E-12 1.3E-16 129.6 16.6 181 299-530 9-193 (256)
165 KOG0198 MEKK and related serin 99.4 1.1E-12 2.4E-17 141.9 11.5 181 299-526 23-212 (313)
166 cd06619 PKc_MKK5 Catalytic dom 99.4 2.8E-12 6E-17 135.1 14.1 180 299-531 7-188 (279)
167 KOG0588 Serine/threonine prote 99.4 1.8E-12 3.8E-17 147.5 13.3 185 299-531 18-207 (786)
168 cd05606 STKc_beta_ARK Catalyti 99.4 4.1E-12 8.9E-17 134.1 15.5 183 300-531 1-191 (278)
169 cd05581 STKc_PDK1 Catalytic do 99.4 1.7E-12 3.7E-17 135.2 12.4 190 299-530 7-216 (280)
170 cd07872 STKc_PCTAIRE2 Catalyti 99.4 1.9E-12 4.1E-17 138.6 12.6 185 298-531 11-200 (309)
171 cd05059 PTKc_Tec_like Catalyti 99.4 4.6E-12 1E-16 131.4 15.1 181 299-530 10-195 (256)
172 cd05037 PTK_Jak_rpt1 Pseudokin 99.4 3E-12 6.4E-17 132.1 13.6 117 402-530 73-200 (259)
173 PHA03212 serine/threonine kina 99.4 1.6E-12 3.4E-17 145.4 12.4 177 299-531 98-278 (391)
174 cd05109 PTKc_HER2 Catalytic do 99.4 5.1E-12 1.1E-16 132.8 15.5 184 299-530 13-205 (279)
175 cd06654 STKc_PAK1 Catalytic do 99.4 3.5E-12 7.6E-17 136.0 14.4 181 299-531 26-211 (296)
176 KOG0591 NIMA (never in mitosis 99.4 5E-13 1.1E-17 139.2 7.3 118 404-529 95-221 (375)
177 cd05103 PTKc_VEGFR2 Catalytic 99.4 4.5E-12 9.8E-17 138.4 15.2 85 440-530 191-275 (343)
178 cd08228 STKc_Nek6 Catalytic do 99.4 9.5E-12 2.1E-16 129.3 17.0 186 299-530 8-200 (267)
179 cd05069 PTKc_Yes Catalytic dom 99.4 4.5E-12 9.8E-17 131.8 14.6 181 299-530 12-197 (260)
180 cd06637 STKc_TNIK Catalytic do 99.4 3.7E-12 7.9E-17 132.8 13.9 194 288-531 3-211 (272)
181 cd05105 PTKc_PDGFR_alpha Catal 99.4 5.3E-12 1.1E-16 141.7 16.0 86 439-530 248-333 (400)
182 cd05083 PTKc_Chk Catalytic dom 99.4 4.1E-12 8.9E-17 131.4 14.0 176 299-530 12-191 (254)
183 cd05574 STKc_phototropin_like 99.4 3.8E-12 8.3E-17 136.3 14.2 190 299-530 7-226 (316)
184 cd06646 STKc_MAP4K5 Catalytic 99.4 7.3E-12 1.6E-16 130.3 15.8 182 299-531 15-204 (267)
185 cd05611 STKc_Rim15_like Cataly 99.4 9.7E-12 2.1E-16 128.9 16.7 182 299-530 2-187 (260)
186 cd05090 PTKc_Ror1 Catalytic do 99.4 5E-12 1.1E-16 133.1 14.6 183 299-530 11-220 (283)
187 cd05108 PTKc_EGFR Catalytic do 99.4 3.8E-12 8.3E-17 136.8 14.0 185 298-530 12-205 (316)
188 cd05578 STKc_Yank1 Catalytic d 99.4 4.6E-12 9.9E-17 131.2 14.0 183 299-531 6-194 (258)
189 cd06632 STKc_MEKK1_plant Catal 99.4 5.1E-12 1.1E-16 130.0 14.3 188 298-531 5-197 (258)
190 cd06645 STKc_MAP4K3 Catalytic 99.4 6.5E-12 1.4E-16 130.7 15.1 182 299-530 15-203 (267)
191 cd05572 STKc_cGK_PKG Catalytic 99.4 7.8E-12 1.7E-16 129.8 15.6 182 301-530 1-186 (262)
192 PHA03211 serine/threonine kina 99.4 2.2E-12 4.8E-17 147.3 12.5 178 299-530 175-356 (461)
193 cd05097 PTKc_DDR_like Catalyti 99.4 5.1E-12 1.1E-16 134.2 14.4 185 299-531 11-226 (295)
194 KOG4721 Serine/threonine prote 99.4 1.9E-12 4.2E-17 144.5 11.3 175 299-531 130-306 (904)
195 cd05088 PTKc_Tie2 Catalytic do 99.4 1.1E-11 2.3E-16 132.7 16.7 182 299-530 13-217 (303)
196 cd05054 PTKc_VEGFR Catalytic d 99.4 5.8E-12 1.3E-16 137.5 14.9 86 439-530 184-269 (337)
197 cd05113 PTKc_Btk_Bmx Catalytic 99.4 7.5E-12 1.6E-16 130.1 15.1 181 299-530 10-195 (256)
198 cd05071 PTKc_Src Catalytic dom 99.4 7.9E-12 1.7E-16 130.5 15.3 182 299-530 12-197 (262)
199 KOG0611 Predicted serine/threo 99.4 1.7E-12 3.6E-17 140.3 10.3 183 299-530 59-247 (668)
200 cd06658 STKc_PAK5 Catalytic do 99.4 3.1E-12 6.7E-17 136.3 12.4 182 299-531 28-213 (292)
201 cd08219 STKc_Nek3 Catalytic do 99.4 6.5E-12 1.4E-16 129.8 14.5 185 299-531 6-195 (255)
202 cd07880 STKc_p38gamma_MAPK12 C 99.4 3.3E-12 7.2E-17 139.4 12.9 197 282-530 3-210 (343)
203 PTZ00284 protein kinase; Provi 99.4 4.5E-12 9.7E-17 144.5 14.4 185 299-531 135-340 (467)
204 KOG0608 Warts/lats-like serine 99.4 2.4E-12 5.2E-17 145.2 11.8 134 393-530 691-865 (1034)
205 cd06659 STKc_PAK6 Catalytic do 99.4 7.3E-12 1.6E-16 133.7 15.1 190 288-531 18-212 (297)
206 cd06623 PKc_MAPKK_plant_like C 99.4 9.8E-12 2.1E-16 128.4 15.5 184 299-531 7-195 (264)
207 cd07847 STKc_CDKL1_4 Catalytic 99.4 6.8E-12 1.5E-16 131.5 14.4 185 299-531 7-196 (286)
208 cd06644 STKc_STK10_LOK Catalyt 99.4 6.4E-12 1.4E-16 133.0 14.3 183 299-530 18-209 (292)
209 cd06606 STKc_MAPKKK Catalytic 99.4 1.3E-11 2.8E-16 126.1 16.0 188 298-531 5-198 (260)
210 cd05151 ChoK Choline Kinase (C 99.4 6.8E-12 1.5E-16 122.2 13.4 131 298-481 3-138 (170)
211 cd08215 STKc_Nek Catalytic dom 99.4 1.2E-11 2.6E-16 126.6 15.7 185 299-530 6-197 (258)
212 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.4 7.9E-12 1.7E-16 131.6 14.8 187 299-531 10-205 (283)
213 cd06655 STKc_PAK2 Catalytic do 99.4 6.1E-12 1.3E-16 134.3 14.0 182 299-531 25-210 (296)
214 cd05062 PTKc_IGF-1R Catalytic 99.4 1.2E-11 2.6E-16 129.8 16.1 186 299-530 12-215 (277)
215 cd06613 STKc_MAP4K3_like Catal 99.4 8.9E-12 1.9E-16 128.7 14.9 184 299-531 9-199 (262)
216 cd06611 STKc_SLK_like Catalyti 99.4 1.4E-11 3.1E-16 129.3 16.6 183 299-530 11-202 (280)
217 PHA03209 serine/threonine kina 99.4 2.6E-12 5.6E-17 141.3 11.5 176 299-531 72-251 (357)
218 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.4 6.2E-12 1.3E-16 132.3 13.9 188 299-531 10-206 (284)
219 cd05106 PTKc_CSF-1R Catalytic 99.4 8.1E-12 1.7E-16 138.5 15.4 86 439-530 223-308 (374)
220 cd08229 STKc_Nek7 Catalytic do 99.4 7.8E-12 1.7E-16 129.9 14.4 186 299-531 8-201 (267)
221 cd06624 STKc_ASK Catalytic dom 99.4 1.1E-11 2.4E-16 129.2 15.7 183 299-531 14-206 (268)
222 cd06615 PKc_MEK Catalytic doma 99.4 1.2E-11 2.7E-16 132.5 16.3 182 299-531 7-193 (308)
223 KOG0658 Glycogen synthase kina 99.4 7.6E-13 1.6E-17 142.3 6.8 180 297-530 28-220 (364)
224 cd05067 PTKc_Lck_Blk Catalytic 99.4 1.1E-11 2.4E-16 128.7 15.4 182 299-530 12-197 (260)
225 KOG0197 Tyrosine kinases [Sign 99.4 3E-12 6.5E-17 143.2 11.7 183 300-531 213-399 (468)
226 cd06614 STKc_PAK Catalytic dom 99.4 1.3E-11 2.9E-16 130.0 16.2 183 299-531 25-211 (286)
227 cd05073 PTKc_Hck Catalytic dom 99.4 1.2E-11 2.6E-16 128.5 15.6 182 299-530 12-197 (260)
228 cd05057 PTKc_EGFR_like Catalyt 99.4 1.1E-11 2.5E-16 130.1 15.5 185 299-530 13-205 (279)
229 cd05577 STKc_GRK Catalytic dom 99.4 8.7E-12 1.9E-16 131.0 14.5 183 301-530 1-188 (277)
230 cd05065 PTKc_EphR_B Catalytic 99.4 7.3E-12 1.6E-16 130.7 13.8 188 299-530 10-205 (269)
231 cd05035 PTKc_Axl_like Catalyti 99.4 1.6E-11 3.4E-16 127.7 16.2 188 299-531 5-210 (273)
232 cd07850 STKc_JNK Catalytic dom 99.4 5.8E-12 1.3E-16 137.8 13.6 189 292-531 14-212 (353)
233 PRK09605 bifunctional UGMP fam 99.4 6.8E-12 1.5E-16 145.9 14.9 142 297-482 337-479 (535)
234 cd07853 STKc_NLK Catalytic dom 99.4 3.1E-12 6.8E-17 141.0 11.4 186 299-531 6-200 (372)
235 KOG0201 Serine/threonine prote 99.3 8.7E-13 1.9E-17 144.3 6.8 190 288-530 10-205 (467)
236 cd05052 PTKc_Abl Catalytic dom 99.3 1E-11 2.2E-16 129.3 14.7 182 299-530 12-199 (263)
237 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.3 1E-11 2.2E-16 131.0 14.6 119 401-529 88-214 (274)
238 cd08220 STKc_Nek8 Catalytic do 99.3 7.9E-12 1.7E-16 128.6 13.5 184 299-530 6-195 (256)
239 cd05146 RIO3_euk RIO kinase fa 99.3 1.5E-11 3.2E-16 125.2 15.1 164 299-485 3-179 (197)
240 cd05075 PTKc_Axl Catalytic dom 99.3 7.2E-12 1.6E-16 130.6 13.2 188 299-530 5-208 (272)
241 cd08221 STKc_Nek9 Catalytic do 99.3 1.7E-11 3.6E-16 126.7 15.8 185 299-530 6-195 (256)
242 cd06643 STKc_SLK Catalytic dom 99.3 1.9E-11 4.1E-16 128.6 16.4 183 299-530 11-202 (282)
243 cd05091 PTKc_Ror2 Catalytic do 99.3 1.3E-11 2.8E-16 129.8 15.1 186 299-530 11-220 (283)
244 cd05579 STKc_MAST_like Catalyt 99.3 1.1E-11 2.4E-16 127.6 14.2 186 301-530 1-195 (265)
245 cd05066 PTKc_EphR_A Catalytic 99.3 1E-11 2.2E-16 129.7 14.0 187 299-530 10-203 (267)
246 cd06620 PKc_MAPKK_Byr1_like Ca 99.3 1.1E-11 2.4E-16 130.8 14.4 182 299-531 11-197 (284)
247 PF07714 Pkinase_Tyr: Protein 99.3 3.5E-12 7.6E-17 133.3 10.5 187 299-531 5-200 (259)
248 cd06609 STKc_MST3_like Catalyt 99.3 1.1E-11 2.3E-16 129.8 14.1 183 299-531 7-193 (274)
249 cd07832 STKc_CCRK Catalytic do 99.3 7.3E-12 1.6E-16 131.3 12.9 186 299-531 6-196 (286)
250 cd06648 STKc_PAK_II Catalytic 99.3 1.4E-11 3.1E-16 130.4 15.2 183 298-531 24-210 (285)
251 cd06639 STKc_myosinIIIB Cataly 99.3 1.9E-11 4.1E-16 129.2 16.1 184 299-530 28-227 (291)
252 cd05583 STKc_MSK_N N-terminal 99.3 1.3E-11 2.8E-16 130.3 14.8 189 299-531 6-203 (288)
253 cd06630 STKc_MEKK1 Catalytic d 99.3 1.3E-11 2.8E-16 128.1 14.5 194 299-531 6-203 (268)
254 cd05101 PTKc_FGFR2 Catalytic d 99.3 1.4E-11 3.1E-16 131.3 15.1 187 298-530 20-233 (304)
255 cd05077 PTK_Jak1_rpt1 Pseudoki 99.3 1.8E-11 4E-16 128.0 15.5 177 300-530 2-203 (262)
256 PHA03207 serine/threonine kina 99.3 3.7E-12 8E-17 141.9 10.8 179 299-531 98-282 (392)
257 cd05116 PTKc_Syk Catalytic dom 99.3 1.2E-11 2.7E-16 128.3 14.0 185 300-530 2-192 (257)
258 cd06636 STKc_MAP4K4_6 Catalyti 99.3 8.9E-12 1.9E-16 130.9 12.9 182 299-531 22-221 (282)
259 cd07868 STKc_CDK8 Catalytic do 99.3 8.5E-12 1.9E-16 133.7 13.0 189 296-531 4-211 (317)
260 cd07861 STKc_CDK1_euk Catalyti 99.3 9.7E-12 2.1E-16 130.5 13.1 185 299-531 6-197 (285)
261 cd07873 STKc_PCTAIRE1 Catalyti 99.3 7.8E-12 1.7E-16 133.2 12.5 185 298-531 11-200 (301)
262 PF06176 WaaY: Lipopolysacchar 99.3 2.5E-11 5.4E-16 124.8 15.5 81 390-480 104-184 (229)
263 cd05038 PTKc_Jak_rpt2 Catalyti 99.3 9.8E-12 2.1E-16 130.0 12.9 186 299-531 10-207 (284)
264 cd06633 STKc_TAO3 Catalytic do 99.3 3.4E-11 7.4E-16 129.5 17.4 193 285-530 15-214 (313)
265 cd07833 STKc_CDKL Catalytic do 99.3 7.5E-12 1.6E-16 131.3 12.0 185 299-530 7-196 (288)
266 cd06610 STKc_OSR1_SPAK Catalyt 99.3 2.7E-11 5.9E-16 125.3 15.9 189 299-531 7-202 (267)
267 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.3 2E-11 4.4E-16 127.5 15.0 182 300-530 2-203 (269)
268 cd05095 PTKc_DDR2 Catalytic do 99.3 1.3E-11 2.8E-16 131.1 13.8 185 299-531 11-227 (296)
269 cd05060 PTKc_Syk_like Catalyti 99.3 2.8E-11 6.1E-16 125.4 15.9 182 300-530 2-192 (257)
270 cd05058 PTKc_Met_Ron Catalytic 99.3 1.9E-11 4.1E-16 126.7 14.5 188 300-530 2-196 (262)
271 cd05061 PTKc_InsR Catalytic do 99.3 2.2E-11 4.8E-16 128.8 15.3 185 299-530 12-215 (288)
272 PRK12274 serine/threonine prot 99.3 1.9E-11 4.2E-16 125.3 14.2 159 298-509 7-166 (218)
273 cd06621 PKc_MAPKK_Pek1_like Ca 99.3 3.4E-11 7.4E-16 127.4 16.7 184 299-531 7-198 (287)
274 cd06638 STKc_myosinIIIA Cataly 99.3 1.9E-11 4.2E-16 128.5 14.7 184 299-530 24-223 (286)
275 cd05042 PTKc_Aatyk Catalytic d 99.3 2.9E-11 6.3E-16 126.2 15.9 184 300-530 2-203 (269)
276 cd06634 STKc_TAO2 Catalytic do 99.3 4E-11 8.7E-16 128.6 17.4 193 285-530 9-208 (308)
277 cd05613 STKc_MSK1_N N-terminal 99.3 2E-11 4.3E-16 129.0 14.7 188 299-530 6-202 (290)
278 cd05111 PTK_HER3 Pseudokinase 99.3 2.3E-11 5.1E-16 128.2 15.2 123 402-530 81-205 (279)
279 PTZ00036 glycogen synthase kin 99.3 1.4E-11 3.1E-16 139.7 14.4 181 299-532 72-267 (440)
280 cd06607 STKc_TAO Catalytic dom 99.3 2.6E-11 5.5E-16 129.7 15.4 182 299-531 21-209 (307)
281 cd05107 PTKc_PDGFR_beta Cataly 99.3 2.9E-11 6.2E-16 135.8 16.4 85 440-530 251-335 (401)
282 cd07867 STKc_CDC2L6 Catalytic 99.3 1.2E-11 2.6E-16 132.1 12.8 190 296-531 4-211 (317)
283 cd05051 PTKc_DDR Catalytic dom 99.3 2.6E-11 5.6E-16 128.2 15.0 187 299-531 11-227 (296)
284 cd07841 STKc_CDK7 Catalytic do 99.3 1.3E-11 2.8E-16 130.8 12.7 188 299-531 6-198 (298)
285 cd07839 STKc_CDK5 Catalytic do 99.3 7.5E-12 1.6E-16 131.4 10.8 185 299-531 6-195 (284)
286 PHA03390 pk1 serine/threonine- 99.3 4E-11 8.6E-16 126.0 16.2 172 301-531 24-201 (267)
287 cd06626 STKc_MEKK4 Catalytic d 99.3 1.9E-11 4.1E-16 126.4 13.5 186 299-531 6-201 (264)
288 cd08217 STKc_Nek2 Catalytic do 99.3 2.7E-11 5.9E-16 124.7 14.5 187 299-531 6-205 (265)
289 cd05044 PTKc_c-ros Catalytic d 99.3 1.8E-11 3.8E-16 127.4 13.1 185 300-530 2-207 (269)
290 cd05098 PTKc_FGFR1 Catalytic d 99.3 2.2E-11 4.7E-16 130.3 14.1 188 298-530 23-236 (307)
291 cd06652 STKc_MEKK2 Catalytic d 99.3 3.1E-11 6.7E-16 125.7 14.9 190 299-530 8-203 (265)
292 cd05055 PTKc_PDGFR Catalytic d 99.3 2.7E-11 5.8E-16 129.7 14.7 188 298-530 40-237 (302)
293 cd06647 STKc_PAK_I Catalytic d 99.3 2.3E-11 5E-16 129.5 14.1 182 299-531 25-210 (293)
294 cd07844 STKc_PCTAIRE_like Cata 99.3 1.6E-11 3.4E-16 129.7 12.7 184 299-531 11-199 (291)
295 cd05047 PTKc_Tie Catalytic dom 99.3 5E-11 1.1E-15 124.8 16.2 182 300-530 2-205 (270)
296 cd05148 PTKc_Srm_Brk Catalytic 99.3 2.6E-11 5.5E-16 125.6 13.7 183 299-530 12-198 (261)
297 cd07836 STKc_Pho85 Catalytic d 99.3 2.7E-11 5.8E-16 127.1 14.0 182 299-531 6-196 (284)
298 KOG0610 Putative serine/threon 99.3 1.9E-11 4.2E-16 133.1 13.0 190 299-530 83-329 (459)
299 PLN03225 Serine/threonine-prot 99.3 1.3E-11 2.9E-16 144.3 12.8 123 401-530 207-373 (566)
300 COG3642 Mn2+-dependent serine/ 99.3 1E-10 2.2E-15 116.7 17.0 139 299-479 2-140 (204)
301 cd06622 PKc_MAPKK_PBS2_like Ca 99.3 2E-11 4.3E-16 128.6 12.8 182 299-530 7-201 (286)
302 cd05123 STKc_AGC Catalytic dom 99.3 3.7E-11 8E-16 123.2 14.4 182 301-531 1-188 (250)
303 cd08227 PK_STRAD_alpha Pseudok 99.3 3.9E-11 8.5E-16 129.8 15.1 191 300-531 5-205 (327)
304 cd08218 STKc_Nek1 Catalytic do 99.3 9.1E-11 2E-15 121.2 17.2 182 299-530 6-195 (256)
305 cd05099 PTKc_FGFR4 Catalytic d 99.3 6.3E-11 1.4E-15 127.3 16.4 187 298-530 17-230 (314)
306 cd05036 PTKc_ALK_LTK Catalytic 99.3 5.2E-11 1.1E-15 125.1 15.4 186 299-530 12-215 (277)
307 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.3 1.9E-11 4.1E-16 127.2 11.8 119 402-530 72-199 (258)
308 cd07879 STKc_p38delta_MAPK13 C 99.3 2.2E-11 4.7E-16 132.8 12.9 195 284-531 5-210 (342)
309 PHA02882 putative serine/threo 99.3 1.7E-11 3.7E-16 130.7 11.7 137 389-530 81-227 (294)
310 cd06608 STKc_myosinIII_like Ca 99.3 4.3E-11 9.2E-16 124.1 14.3 185 299-531 12-213 (275)
311 cd07877 STKc_p38alpha_MAPK14 C 99.3 2.6E-11 5.6E-16 132.5 13.3 184 294-530 17-212 (345)
312 cd06653 STKc_MEKK3_like_1 Cata 99.3 5.8E-11 1.3E-15 123.7 15.3 190 299-530 8-203 (264)
313 cd05050 PTKc_Musk Catalytic do 99.3 4.3E-11 9.2E-16 126.4 14.5 184 299-530 11-226 (288)
314 cd05120 APH_ChoK_like Aminogly 99.3 4.9E-11 1.1E-15 111.5 13.3 134 299-483 4-142 (155)
315 cd07843 STKc_CDC2L1 Catalytic 99.3 3.8E-11 8.2E-16 127.1 14.0 186 299-531 11-202 (293)
316 cd05032 PTKc_InsR_like Catalyt 99.3 7.3E-11 1.6E-15 123.3 15.8 186 299-530 12-215 (277)
317 cd06651 STKc_MEKK3 Catalytic d 99.3 6.2E-11 1.3E-15 123.7 15.1 193 298-531 7-204 (266)
318 cd07837 STKc_CdkB_plant Cataly 99.3 3.7E-11 8E-16 126.9 13.6 187 299-531 7-207 (295)
319 cd05094 PTKc_TrkC Catalytic do 99.3 3E-11 6.5E-16 128.1 12.9 185 299-530 11-219 (291)
320 cd05610 STKc_MASTL Catalytic d 99.3 2.8E-11 6E-16 144.4 14.0 142 299-482 10-156 (669)
321 cd07840 STKc_CDK9_like Catalyt 99.3 2.7E-11 5.8E-16 126.7 12.1 187 299-531 5-197 (287)
322 cd05089 PTKc_Tie1 Catalytic do 99.3 5.7E-11 1.2E-15 126.4 14.7 183 299-530 8-212 (297)
323 cd07846 STKc_CDKL2_3 Catalytic 99.3 2.9E-11 6.2E-16 127.0 12.0 185 299-531 7-196 (286)
324 cd07870 STKc_PFTAIRE2 Catalyti 99.3 3.3E-11 7.1E-16 127.4 12.5 185 298-531 10-199 (291)
325 cd05045 PTKc_RET Catalytic dom 99.3 6.4E-11 1.4E-15 125.3 14.6 186 299-530 6-223 (290)
326 cd05056 PTKc_FAK Catalytic dom 99.3 8.6E-11 1.9E-15 122.7 15.3 184 299-530 12-202 (270)
327 cd05093 PTKc_TrkB Catalytic do 99.3 4.2E-11 9.1E-16 126.8 13.1 186 298-530 10-216 (288)
328 cd06617 PKc_MKK3_6 Catalytic d 99.3 8.6E-11 1.9E-15 123.2 15.1 184 299-531 7-202 (283)
329 cd07845 STKc_CDK10 Catalytic d 99.3 4E-11 8.6E-16 128.2 12.7 186 299-531 13-204 (309)
330 cd05118 STKc_CMGC Catalytic do 99.2 7.3E-11 1.6E-15 123.3 14.2 184 299-531 5-194 (283)
331 cd08530 STKc_CNK2-like Catalyt 99.2 6E-11 1.3E-15 121.9 13.3 183 299-530 6-195 (256)
332 cd07865 STKc_CDK9 Catalytic do 99.2 3.9E-11 8.5E-16 127.2 12.3 191 298-531 17-219 (310)
333 PLN00009 cyclin-dependent kina 99.2 8.8E-11 1.9E-15 124.3 14.8 185 299-531 8-199 (294)
334 cd05110 PTKc_HER4 Catalytic do 99.2 6.8E-11 1.5E-15 126.4 14.0 185 299-530 13-205 (303)
335 cd08528 STKc_Nek10 Catalytic d 99.2 7.7E-11 1.7E-15 122.8 14.0 194 299-531 6-208 (269)
336 cd07851 STKc_p38 Catalytic dom 99.2 4.1E-11 8.8E-16 130.7 12.1 195 285-531 6-211 (343)
337 KOG0580 Serine/threonine prote 99.2 1.3E-11 2.9E-16 126.4 7.6 191 294-532 22-218 (281)
338 PTZ00266 NIMA-related protein 99.2 7.3E-11 1.6E-15 143.5 15.3 189 299-532 19-239 (1021)
339 cd05053 PTKc_FGFR Catalytic do 99.2 9.4E-11 2E-15 123.9 14.3 187 299-530 18-228 (293)
340 cd07860 STKc_CDK2_3 Catalytic 99.2 2.3E-11 5E-16 127.8 9.4 185 299-531 6-196 (284)
341 smart00221 STYKc Protein kinas 99.2 1.7E-10 3.6E-15 115.7 14.9 185 299-530 5-194 (225)
342 smart00220 S_TKc Serine/Threon 99.2 9.4E-11 2E-15 118.0 13.1 174 305-530 1-180 (244)
343 cd07864 STKc_CDK12 Catalytic d 99.2 7.3E-11 1.6E-15 125.1 12.9 187 299-531 13-213 (302)
344 cd08225 STKc_Nek5 Catalytic do 99.2 1.1E-10 2.4E-15 120.2 13.8 186 299-530 6-196 (257)
345 cd05100 PTKc_FGFR3 Catalytic d 99.2 1.5E-10 3.4E-15 125.5 15.5 185 299-530 18-230 (334)
346 KOG1989 ARK protein kinase fam 99.2 1.5E-10 3.2E-15 136.0 16.1 186 299-529 43-251 (738)
347 cd05092 PTKc_TrkA Catalytic do 99.2 1.1E-10 2.3E-15 123.1 13.7 185 299-530 11-218 (280)
348 KOG0589 Serine/threonine prote 99.2 2.2E-11 4.8E-16 135.6 8.8 186 299-530 10-200 (426)
349 cd07829 STKc_CDK_like Catalyti 99.2 9E-11 2E-15 122.6 12.9 185 299-531 5-194 (282)
350 PRK10345 hypothetical protein; 99.2 1.1E-10 2.3E-15 120.2 13.1 142 298-480 7-159 (210)
351 COG1718 RIO1 Serine/threonine 99.2 5.3E-10 1.2E-14 116.4 18.1 184 300-513 55-242 (268)
352 PHA03210 serine/threonine kina 99.2 5.8E-11 1.3E-15 137.0 12.1 200 299-531 154-363 (501)
353 KOG0194 Protein tyrosine kinas 99.2 7.5E-11 1.6E-15 133.5 12.1 184 299-529 163-355 (474)
354 cd07866 STKc_BUR1 Catalytic do 99.2 5.6E-11 1.2E-15 126.1 10.4 192 299-531 14-222 (311)
355 cd05046 PTK_CCK4 Pseudokinase 99.2 1.3E-10 2.8E-15 121.5 12.9 183 299-530 11-212 (275)
356 cd07838 STKc_CDK4_6_like Catal 99.2 3.1E-10 6.7E-15 118.9 15.6 188 299-531 5-201 (287)
357 cd07835 STKc_CDK1_like Catalyt 99.2 7.8E-11 1.7E-15 123.7 10.8 185 299-531 5-195 (283)
358 cd07831 STKc_MOK Catalytic dom 99.2 3E-10 6.6E-15 118.8 15.0 183 299-530 5-193 (282)
359 cd05043 PTK_Ryk Pseudokinase d 99.2 2.8E-10 6E-15 119.5 14.7 187 299-530 12-213 (280)
360 cd07856 STKc_Sty1_Hog1 Catalyt 99.2 1.4E-10 3E-15 126.1 12.3 181 298-531 15-201 (328)
361 cd06616 PKc_MKK4 Catalytic dom 99.2 3.5E-10 7.6E-15 119.2 14.8 183 299-530 10-204 (288)
362 cd05074 PTKc_Tyro3 Catalytic d 99.2 3.4E-10 7.3E-15 118.1 14.5 185 299-530 5-209 (273)
363 cd08226 PK_STRAD_beta Pseudoki 99.2 2.6E-10 5.7E-15 123.4 14.1 188 303-531 10-205 (328)
364 cd07849 STKc_ERK1_2_like Catal 99.2 8.4E-11 1.8E-15 127.6 10.2 186 299-531 11-205 (336)
365 cd06618 PKc_MKK7 Catalytic dom 99.2 2.4E-10 5.2E-15 121.4 13.4 183 299-531 21-213 (296)
366 cd07834 STKc_MAPK Catalytic do 99.2 7.7E-11 1.7E-15 127.0 9.7 184 299-530 6-201 (330)
367 cd07857 STKc_MPK1 Catalytic do 99.2 1.4E-10 3.1E-15 125.7 11.5 186 299-530 6-204 (332)
368 cd05576 STKc_RPK118_like Catal 99.2 2.2E-10 4.8E-15 118.0 12.3 118 402-531 58-177 (237)
369 PRK01723 3-deoxy-D-manno-octul 99.2 6.7E-10 1.5E-14 116.4 16.0 149 299-482 37-194 (239)
370 KOG1095 Protein tyrosine kinas 99.2 1.6E-10 3.5E-15 139.6 12.6 187 299-531 698-899 (1025)
371 cd05086 PTKc_Aatyk2 Catalytic 99.2 5.2E-10 1.1E-14 117.2 14.9 122 402-530 68-202 (268)
372 cd07830 STKc_MAK_like Catalyti 99.1 2.2E-10 4.7E-15 120.1 11.9 183 299-531 5-194 (283)
373 cd08216 PK_STRAD Pseudokinase 99.1 4.1E-10 9E-15 120.3 14.2 190 301-531 10-205 (314)
374 cd07855 STKc_ERK5 Catalytic do 99.1 1.4E-10 3.1E-15 125.8 10.7 188 299-530 11-206 (334)
375 COG0478 RIO-like serine/threon 99.1 7.8E-10 1.7E-14 116.2 15.4 180 299-512 97-277 (304)
376 KOG0696 Serine/threonine prote 99.1 7.9E-11 1.7E-15 127.8 7.8 185 299-530 355-544 (683)
377 KOG1094 Discoidin domain recep 99.1 1.6E-10 3.5E-15 129.9 10.4 189 299-533 544-736 (807)
378 PLN03224 probable serine/threo 99.1 3.9E-10 8.5E-15 130.0 13.5 78 402-481 258-360 (507)
379 cd07852 STKc_MAPK15 Catalytic 99.1 3.6E-10 7.9E-15 122.6 12.4 189 299-531 13-208 (337)
380 cd07842 STKc_CDK8_like Catalyt 99.1 3.6E-10 7.8E-15 120.4 11.9 192 299-531 6-211 (316)
381 KOG0196 Tyrosine kinase, EPH ( 99.1 1E-10 2.3E-15 135.1 8.1 214 265-525 603-823 (996)
382 KOG4645 MAPKKK (MAP kinase kin 99.1 2.1E-11 4.6E-16 146.9 2.4 180 299-525 1241-1430(1509)
383 cd07858 STKc_TEY_MAPK_plant Ca 99.1 4.6E-10 1E-14 122.1 12.7 185 298-530 10-203 (337)
384 KOG3653 Transforming growth fa 99.1 2.1E-10 4.6E-15 126.8 9.9 177 299-524 216-404 (534)
385 cd07854 STKc_MAPK4_6 Catalytic 99.1 4.6E-10 1E-14 122.4 11.9 122 403-531 90-214 (342)
386 cd08222 STKc_Nek11 Catalytic d 99.1 4.5E-10 9.8E-15 116.4 11.3 120 402-530 75-199 (260)
387 KOG1164 Casein kinase (serine/ 99.1 1.2E-09 2.5E-14 119.1 14.0 186 298-523 23-224 (322)
388 KOG0587 Traf2- and Nck-interac 99.1 8.7E-10 1.9E-14 129.1 13.6 162 299-509 25-196 (953)
389 KOG0586 Serine/threonine prote 99.1 4E-10 8.8E-15 128.0 10.2 182 299-531 62-250 (596)
390 KOG4717 Serine/threonine prote 99.1 9.9E-10 2.1E-14 122.0 12.6 184 298-530 23-213 (864)
391 KOG0199 ACK and related non-re 99.0 2.8E-10 6.2E-15 130.0 7.5 187 299-531 116-310 (1039)
392 PTZ00024 cyclin-dependent prot 99.0 1.3E-09 2.8E-14 118.1 12.4 150 299-481 15-170 (335)
393 KOG1165 Casein kinase (serine/ 99.0 8.7E-10 1.9E-14 117.6 10.6 142 299-485 34-185 (449)
394 KOG0668 Casein kinase II, alph 99.0 3.5E-10 7.7E-15 115.3 7.1 227 299-596 44-274 (338)
395 KOG0603 Ribosomal protein S6 k 99.0 6E-10 1.3E-14 127.2 9.8 178 300-533 329-510 (612)
396 KOG0690 Serine/threonine prote 99.0 5.2E-10 1.1E-14 118.7 8.6 191 294-531 168-363 (516)
397 KOG3087 Serine/threonine prote 99.0 4.7E-09 1E-13 104.7 14.2 147 297-478 11-164 (229)
398 KOG0596 Dual specificity; seri 99.0 1.7E-09 3.7E-14 121.5 12.3 183 299-530 367-566 (677)
399 KOG0664 Nemo-like MAPK-related 99.0 2E-10 4.3E-15 119.3 4.4 87 440-532 168-254 (449)
400 KOG0599 Phosphorylase kinase g 99.0 1.4E-09 3.1E-14 113.2 10.3 199 290-532 13-224 (411)
401 PLN00113 leucine-rich repeat r 99.0 2.5E-09 5.4E-14 132.5 14.3 174 298-532 695-874 (968)
402 KOG1035 eIF-2alpha kinase GCN2 99.0 2.9E-10 6.4E-15 136.7 5.7 129 404-535 671-817 (1351)
403 KOG0695 Serine/threonine prote 99.0 2.2E-09 4.7E-14 114.2 10.6 243 293-608 249-496 (593)
404 KOG0986 G protein-coupled rece 99.0 4.2E-09 9.1E-14 116.1 12.8 186 299-532 191-382 (591)
405 KOG0033 Ca2+/calmodulin-depend 99.0 9.9E-10 2.1E-14 113.0 7.4 188 299-533 17-209 (355)
406 KOG1166 Mitotic checkpoint ser 99.0 1.6E-09 3.6E-14 130.9 10.5 140 299-480 704-851 (974)
407 KOG0983 Mitogen-activated prot 99.0 1.4E-09 3.1E-14 113.4 8.2 171 300-526 99-284 (391)
408 KOG0984 Mitogen-activated prot 98.9 8.6E-09 1.9E-13 104.1 12.5 176 300-526 53-242 (282)
409 KOG0607 MAP kinase-interacting 98.9 1.4E-09 3.1E-14 115.3 7.0 190 298-536 83-291 (463)
410 KOG1167 Serine/threonine prote 98.9 2.5E-09 5.4E-14 117.1 8.9 137 297-481 40-184 (418)
411 KOG2052 Activin A type IB rece 98.9 4.1E-09 8.9E-14 116.0 9.1 169 299-512 217-396 (513)
412 KOG0604 MAP kinase-activated p 98.9 1.7E-09 3.7E-14 114.0 4.9 188 297-535 66-262 (400)
413 cd05154 ACAD10_11_like Acyl-Co 98.9 1.3E-08 2.7E-13 103.0 11.0 146 298-483 3-210 (223)
414 PRK15123 lipopolysaccharide co 98.9 6.8E-08 1.5E-12 103.1 16.8 141 308-479 37-194 (268)
415 KOG0614 cGMP-dependent protein 98.8 1.7E-09 3.7E-14 120.3 4.4 117 405-531 496-614 (732)
416 KOG1152 Signal transduction se 98.8 6.7E-09 1.5E-13 117.2 8.1 185 299-526 567-759 (772)
417 KOG1027 Serine/threonine prote 98.8 1.1E-08 2.5E-13 119.5 10.2 181 297-530 513-708 (903)
418 KOG0579 Ste20-like serine/thre 98.8 1.4E-08 3.1E-13 115.0 10.1 101 400-508 100-202 (1187)
419 KOG0670 U4/U6-associated splic 98.8 2.2E-08 4.7E-13 111.9 11.2 143 300-487 439-594 (752)
420 KOG1151 Tousled-like protein k 98.7 5.6E-08 1.2E-12 106.7 11.9 190 300-527 470-675 (775)
421 KOG1025 Epidermal growth facto 98.7 2.3E-08 4.9E-13 116.5 8.5 186 298-530 701-894 (1177)
422 KOG0662 Cyclin-dependent kinas 98.7 2.9E-08 6.2E-13 98.2 8.0 143 299-484 8-155 (292)
423 KOG4279 Serine/threonine prote 98.7 3.9E-08 8.4E-13 112.7 9.9 177 299-523 581-765 (1226)
424 KOG1026 Nerve growth factor re 98.7 2.2E-08 4.8E-13 117.7 7.4 185 299-530 492-699 (774)
425 KOG4257 Focal adhesion tyrosin 98.7 1E-07 2.2E-12 108.4 11.0 184 299-530 395-586 (974)
426 KOG0584 Serine/threonine prote 98.7 4.9E-08 1.1E-12 111.5 8.5 192 286-530 34-237 (632)
427 KOG1006 Mitogen-activated prot 98.7 1.3E-08 2.8E-13 106.1 3.4 142 299-483 70-221 (361)
428 KOG0576 Mitogen-activated prot 98.6 1.1E-08 2.4E-13 117.0 3.0 175 299-525 21-204 (829)
429 PF01636 APH: Phosphotransfera 98.6 7.4E-07 1.6E-11 90.2 16.1 140 299-482 3-200 (239)
430 PF06293 Kdo: Lipopolysacchari 98.6 2.6E-07 5.7E-12 94.6 11.6 106 371-482 58-173 (206)
431 KOG0666 Cyclin C-dependent kin 98.6 6.5E-08 1.4E-12 102.7 5.9 135 387-530 86-234 (438)
432 KOG0671 LAMMER dual specificit 98.6 1.6E-07 3.5E-12 102.1 8.6 180 299-526 95-299 (415)
433 COG0515 SPS1 Serine/threonine 98.5 8.6E-07 1.9E-11 90.7 13.3 184 299-524 6-199 (384)
434 KOG0669 Cyclin T-dependent kin 98.5 3.8E-08 8.2E-13 101.8 2.4 183 299-526 23-219 (376)
435 KOG2345 Serine/threonine prote 98.5 4.8E-07 1E-11 93.8 10.4 188 299-530 27-235 (302)
436 cd05150 APH Aminoglycoside 3'- 98.5 6.4E-06 1.4E-10 85.8 18.2 164 300-512 5-226 (244)
437 KOG1345 Serine/threonine kinas 98.5 2.7E-07 5.8E-12 96.6 7.7 122 401-528 94-217 (378)
438 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 8E-07 1.7E-11 92.5 10.8 137 298-482 6-185 (226)
439 PRK10593 hypothetical protein; 98.5 6.6E-06 1.4E-10 89.1 18.3 93 276-416 3-100 (297)
440 KOG0665 Jun-N-terminal kinase 98.5 5.3E-08 1.1E-12 103.8 1.5 127 392-531 84-212 (369)
441 KOG0200 Fibroblast/platelet-de 98.4 1.9E-06 4E-11 102.2 12.9 181 300-529 303-514 (609)
442 PRK05231 homoserine kinase; Pr 98.4 4.7E-06 1E-10 90.4 14.8 49 270-325 5-54 (319)
443 KOG2270 Serine/threonine prote 98.3 6E-06 1.3E-10 90.4 13.5 186 300-514 151-341 (520)
444 KOG4278 Protein tyrosine kinas 98.3 1.4E-06 3.1E-11 99.1 7.2 179 299-526 273-456 (1157)
445 PRK09550 mtnK methylthioribose 98.2 2.1E-05 4.5E-10 88.6 15.2 87 297-416 30-118 (401)
446 cd05155 APH_ChoK_like_1 Unchar 98.2 1.3E-05 2.9E-10 83.3 12.4 34 447-482 164-197 (235)
447 COG2112 Predicted Ser/Thr prot 98.2 1.3E-05 2.7E-10 80.2 11.4 125 299-478 28-154 (201)
448 PLN00181 protein SPA1-RELATED; 98.2 1.1E-06 2.4E-11 107.2 4.8 128 403-531 54-210 (793)
449 KOG2268 Serine/threonine prote 98.2 5.5E-06 1.2E-10 89.4 8.7 162 299-488 98-260 (465)
450 PLN02756 S-methyl-5-thioribose 98.1 4.6E-05 9.9E-10 85.8 15.8 109 268-413 5-119 (418)
451 PRK12396 5-methylribose kinase 98.1 4.6E-05 9.9E-10 85.4 13.6 113 268-416 6-120 (409)
452 cd05153 HomoserineK_II Homoser 98.0 2.8E-05 6.1E-10 83.3 11.5 32 447-480 175-206 (296)
453 TIGR02721 ycfN_thiK thiamine k 98.0 0.00023 4.9E-09 75.0 17.2 138 299-483 2-179 (256)
454 PF03881 Fructosamin_kin: Fruc 97.9 4.8E-05 1E-09 82.2 10.6 94 274-414 2-97 (288)
455 PRK06148 hypothetical protein; 97.9 0.0003 6.4E-09 88.2 18.8 55 265-327 4-59 (1013)
456 PF14531 Kinase-like: Kinase-l 97.9 0.00012 2.5E-09 79.0 12.0 164 298-485 17-200 (288)
457 TIGR00938 thrB_alt homoserine 97.8 0.00017 3.7E-09 78.1 13.0 34 446-481 186-219 (307)
458 PRK09902 hypothetical protein; 97.8 0.00043 9.3E-09 71.5 14.8 148 295-479 20-179 (216)
459 KOG1290 Serine/threonine prote 97.8 0.00016 3.5E-09 81.3 12.1 136 289-463 71-223 (590)
460 PRK06149 hypothetical protein; 97.7 0.00041 8.9E-09 86.7 14.8 58 262-327 7-64 (972)
461 cd05157 ETNK_euk Ethanolamine 97.7 0.00047 1E-08 71.2 12.8 35 447-482 170-204 (235)
462 PLN02876 acyl-CoA dehydrogenas 97.7 0.00045 9.8E-09 85.0 14.6 107 271-417 17-132 (822)
463 cd05152 MPH2' Macrolide 2'-Pho 97.6 0.0031 6.7E-08 67.8 17.6 34 448-483 186-220 (276)
464 TIGR01767 MTRK 5-methylthiorib 97.5 0.0011 2.4E-08 73.7 13.2 83 301-416 3-87 (370)
465 COG2334 Putative homoserine ki 97.3 0.0009 1.9E-08 73.8 10.0 45 299-344 32-77 (331)
466 PF10707 YrbL-PhoP_reg: PhoP r 97.2 0.0055 1.2E-07 62.9 13.9 150 298-473 6-165 (199)
467 cd05156 ChoK_euk Choline Kinas 97.2 0.0015 3.3E-08 70.2 9.9 36 447-483 179-217 (302)
468 PRK11768 serine/threonine prot 97.1 0.0039 8.4E-08 68.5 11.4 31 446-480 195-225 (325)
469 smart00750 KIND kinase non-cat 97.0 0.0021 4.6E-08 62.7 7.6 96 415-531 2-99 (176)
470 COG3173 Predicted aminoglycosi 97.0 0.003 6.5E-08 69.3 9.2 35 447-483 198-232 (321)
471 KOG0603 Ribosomal protein S6 k 96.9 0.00096 2.1E-08 77.3 5.5 127 388-529 56-184 (612)
472 COG3001 Uncharacterized protei 96.9 0.015 3.3E-07 60.9 13.1 96 274-417 2-99 (286)
473 PLN02236 choline kinase 96.9 0.013 2.9E-07 64.9 13.4 34 448-482 201-234 (344)
474 KOG0590 Checkpoint kinase and 96.7 0.001 2.3E-08 78.8 3.7 110 408-523 400-512 (601)
475 PLN02421 phosphotransferase, a 96.6 0.017 3.6E-07 63.7 11.9 34 449-483 184-217 (330)
476 KOG1033 eIF-2alpha kinase PEK/ 96.5 0.00088 1.9E-08 76.3 0.7 124 404-534 331-460 (516)
477 KOG1240 Protein kinase contain 96.5 0.002 4.2E-08 78.8 3.6 47 429-478 122-168 (1431)
478 KOG4158 BRPK/PTEN-induced prot 96.1 0.0091 2E-07 66.2 6.0 124 404-530 318-451 (598)
479 KOG0606 Microtubule-associated 96.0 0.0054 1.2E-07 74.9 4.1 93 439-533 154-255 (1205)
480 PF04655 APH_6_hur: Aminoglyco 95.8 0.016 3.5E-07 61.7 6.4 29 299-327 8-37 (253)
481 KOG2269 Serine/threonine prote 95.3 0.17 3.6E-06 55.6 11.5 193 292-513 252-459 (531)
482 PRK10271 thiK thiamine kinase; 95.1 0.016 3.6E-07 58.9 3.2 33 448-483 78-110 (188)
483 PF13095 FTA2: Kinetochore Sim 94.8 0.36 7.7E-06 49.9 12.1 25 299-323 43-68 (207)
484 PTZ00384 choline kinase; Provi 94.7 0.33 7.1E-06 54.9 12.4 32 447-481 227-258 (383)
485 KOG1024 Receptor-like protein 94.1 0.074 1.6E-06 59.2 5.5 132 392-529 351-491 (563)
486 PTZ00296 choline kinase; Provi 93.3 1.3 2.9E-05 50.9 14.2 32 448-482 285-316 (442)
487 COG4857 Predicted kinase [Gene 93.0 0.37 8.1E-06 51.9 8.4 49 446-497 227-277 (408)
488 PF12260 PIP49_C: Protein-kina 92.3 0.34 7.5E-06 49.2 6.8 86 392-482 21-114 (188)
489 TIGR02906 spore_CotS spore coa 92.1 0.1 2.2E-06 56.2 2.9 31 446-479 186-216 (313)
490 COG5072 ALK1 Serine/threonine 91.8 0.56 1.2E-05 52.4 8.1 29 447-478 341-369 (488)
491 smart00587 CHK ZnF_C4 abd HLH 91.4 0.15 3.2E-06 51.9 3.0 38 446-483 119-159 (196)
492 PF07914 DUF1679: Protein of u 91.2 4.6 0.0001 46.2 15.0 34 449-482 270-306 (414)
493 PF02958 EcKinase: Ecdysteroid 90.3 0.45 9.8E-06 50.9 5.7 36 448-483 216-254 (294)
494 PF01633 Choline_kinase: Choli 89.7 0.16 3.5E-06 51.8 1.6 35 447-482 143-177 (211)
495 COG0510 ycfN Thiamine kinase a 88.5 0.3 6.5E-06 52.5 2.7 33 448-482 154-186 (269)
496 KOG0601 Cyclin-dependent kinas 85.0 0.88 1.9E-05 53.1 4.1 121 397-524 186-315 (524)
497 TIGR02904 spore_ysxE spore coa 84.3 0.54 1.2E-05 51.1 1.9 33 446-480 195-227 (309)
498 KOG1023 Natriuretic peptide re 78.1 5.5 0.00012 46.4 7.2 120 402-532 20-154 (484)
499 KOG0601 Cyclin-dependent kinas 76.8 1.4 3.1E-05 51.4 2.1 82 398-480 335-417 (524)
500 KOG0590 Checkpoint kinase and 76.8 0.89 1.9E-05 54.4 0.4 121 399-524 91-218 (601)
No 1
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=3.4e-82 Score=717.96 Aligned_cols=381 Identities=43% Similarity=0.766 Sum_probs=359.1
Q ss_pred HHHHHHHHHHHHHHHhCCeeeehhhHhhcCcccCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhcccCccc
Q 004334 221 RRKALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDELSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEP 300 (760)
Q Consensus 221 ~~~~~a~~lr~~l~~LGptfIKlGQ~lStR~DllP~e~~~eL~~Lqd~vpp~p~~~v~~iie~elG~~~~~iF~~fd~~P 300 (760)
+++..+++|+++|++|||+|||+||+||||+|++|++|+++|++|||+|||+|+++++++|++++|.+++++|++|+++|
T Consensus 53 ~~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~Dl~p~e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~~P 132 (517)
T COG0661 53 LREKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEPEP 132 (517)
T ss_pred HhHhHHHHHHHHHHHhCCchhhhhhHHhcCccccCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCCCc
Confidence 34456899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHH------H
Q 004334 301 IAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY------Q 373 (760)
Q Consensus 301 IasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~------~ 373 (760)
+|||||||||+|++ +|++|||||||||+++.+..|+.+|+.++.+++++.|. +...++..+++||.+.+. +
T Consensus 133 iAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~--~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 133 IASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPG--GRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred hhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCc--cccCChHHHHHHHHHHHHHHhCHHH
Confidence 99999999999999 69999999999999999999999999999999998764 345789999999998875 5
Q ss_pred HHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccC
Q 004334 374 EAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHAD 453 (760)
Q Consensus 374 EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaD 453 (760)
||+|+++|++||++++.++||+|||+||+++||||||++|++++|+..++..|.|++.++..++++|++|++.+||||||
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~dgffHaD 290 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRDGFFHAD 290 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSF 533 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~~~ 533 (760)
||||||+|+. +|+++++||||++++++++|..++++++++.++|++.+++.+.++|.+++..|...+..++..+.+.+
T Consensus 291 pHpGNi~v~~--~g~i~~lDfGi~g~l~~~~r~~l~~~~~a~~~rD~~~v~~~~~~~G~~~~~~~~~~~~~~i~~~~~~~ 368 (517)
T COG0661 291 PHPGNILVRS--DGRIVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELHVELGYVPPDTDRDPLAAAIRAVLEPI 368 (517)
T ss_pred CCccceEEec--CCcEEEEcCcceecCCHHHHHHHHHHHHHHHhhCHHHHHHHHHHhCCCCCccchHHHHHHHHHHHHhh
Confidence 9999999996 89999999999999999999999999999999999999999999999999999999998888877665
Q ss_pred HHHHHHHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCchhhhhhhhhhhHHhhhcccCCCC
Q 004334 534 EERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRF 613 (760)
Q Consensus 534 ~~~l~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~~l~Ral~~lEGi~~~LdP~~ 613 (760)
. +.++. +.++++++.+++++++++++++|++++++.|++.++||++++|||++
T Consensus 369 ~-------------------~~~~~--------~~~~~~~~~~~~~~~~~~~~r~p~~l~ll~r~~~~vEg~~~~ldp~~ 421 (517)
T COG0661 369 Y-------------------GKPLE--------EISFGEILDKLFEVARRFPMRLPPELVLLQRTLLLVEGVGRQLDPRF 421 (517)
T ss_pred h-------------------CCChh--------hccHHHHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHHHHHhhCccc
Confidence 2 23432 45788999999999999999999999999999999999999999999
Q ss_pred CHHHhHHHHHHHHHHhhhh
Q 004334 614 DITEIAKPYAMELLKFREA 632 (760)
Q Consensus 614 d~~~~a~P~~~~~l~~~~~ 632 (760)
|+++.+.||+.+++..+..
T Consensus 422 ~~~~~a~p~~~~~~~~~~~ 440 (517)
T COG0661 422 NLWAVAQPLLAKWLKKQLS 440 (517)
T ss_pred cHHHHhhHHHHHHHHHhhh
Confidence 9999999999999876654
No 2
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=100.00 E-value=2e-81 Score=716.06 Aligned_cols=410 Identities=31% Similarity=0.551 Sum_probs=369.6
Q ss_pred HHHHHHHHHHHHhCCeeeehhhHhhcCcccCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhcccCcccccc
Q 004334 224 ALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDELSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAA 303 (760)
Q Consensus 224 ~~a~~lr~~l~~LGptfIKlGQ~lStR~DllP~e~~~eL~~Lqd~vpp~p~~~v~~iie~elG~~~~~iF~~fd~~PIas 303 (760)
..|+++|.+|++|||+|||+||+||||+|++|++|+++|++|||+|||+|+++++++++++||.+++++|.+||++|+|+
T Consensus 50 ~~~~rlr~aLe~LGp~fIKlGQ~LStR~DllP~~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~~Plas 129 (537)
T PRK04750 50 PRGERLRLALEELGPIFVKFGQMLSTRRDLFPPDIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLAS 129 (537)
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHcCcccCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcC
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEEEE-C-CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHH------HH
Q 004334 304 ASLGQVHRARL-K-GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ------EA 375 (760)
Q Consensus 304 aSiGQVhrA~l-~-G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~------EA 375 (760)
||+||||+|++ + |++|||||+||++.+.|..|+.+|+.++++++++.|. ....++.++++|+.+.+.+ |+
T Consensus 130 aSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~--~~~l~~~~~v~e~~~~l~~ElD~~~Ea 207 (537)
T PRK04750 130 ASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPD--GRRLKPREVVAEFEKTLHDELDLMREA 207 (537)
T ss_pred CCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcc--cccCCHHHHHHHHHHHHHHhhCHHHHH
Confidence 99999999999 5 9999999999999999999999999999999998764 3446788889998877654 59
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCC
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPH 455 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDpH 455 (760)
+|+.+|+++|.+.+.++||+|||+||+++|||||||+|++++++..+...+.+++.+++.+++.|+.|+|.+||||+|||
T Consensus 208 ~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~GffHaDpH 287 (537)
T PRK04750 208 ANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMH 287 (537)
T ss_pred HHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence 99999999999999999999999999999999999999999998777788899999999999999999999999999999
Q ss_pred CCcEEEeccCCC----cEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 456 PGNIAVDDVNGG----RLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 456 PGNILV~~~~~g----~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
||||+|++ +| +++++|||+++.++++.|+.+.+++.|+.++|++.+++.+.++|.+.+..|...++.++..+++
T Consensus 288 PGNIlv~~--~g~~~~~i~llDFGivg~l~~~~r~~l~~~~~a~~~~D~~~v~~~~~~~g~~~~~~~~~~l~~~i~~~~~ 365 (537)
T PRK04750 288 PGNIFVSY--DPPENPRYIALDFGIVGSLNKEDKRYLAENFLAFFNRDYRRVAELHVESGWVPPDTRVEELEFAIRAVCE 365 (537)
T ss_pred hHHeEEec--CCCCCCeEEEEecceEEECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 99999985 55 9999999999999999999999999999999999999999999999999999999999988887
Q ss_pred HHHHHHHHHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCchhhhhhhhhhhHHhhhcccCC
Q 004334 532 SFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDP 611 (760)
Q Consensus 532 ~~~~~l~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~~l~Ral~~lEGi~~~LdP 611 (760)
.|. ..|+. +++++.++.++++++++|++++|++++++.|+++++||++++|||
T Consensus 366 ~~~-------------------~~~l~--------~i~~~~~l~~l~~~~r~~~~~ip~~l~ll~ktl~~lEG~~r~LdP 418 (537)
T PRK04750 366 PIF-------------------DKPLA--------EISFGHVLLRLFNTARRFNVEIQPQLVLLQKTLLNVEGLGRQLDP 418 (537)
T ss_pred HHh-------------------CCCcc--------cccHHHHHHHHHHHHHHCCCcccHHHHHHHHHHHHHHHHHHHhCC
Confidence 763 34554 357889999999999999999999999999999999999999999
Q ss_pred CCCHHHhHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 004334 612 RFDITEIAKPYAMELLKFREAGVEVILKDFRNRWDRQTRAFYNLFRQADRVEKLAETIQR 671 (760)
Q Consensus 612 ~~d~~~~a~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~~l~~ 671 (760)
++|+++.++||+.+++.++. ++....+.+.+.+..+.. .+.++| +.+.+++++
T Consensus 419 ~~d~~~~a~p~l~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~lP---~~l~~~l~~ 471 (537)
T PRK04750 419 QLDLWKTAKPFLERWMKEQV-GPRALVRALKEEAPFWAE---KLPELP---RLVHDSLRQ 471 (537)
T ss_pred CCCHHHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHH---HHHHhH---HHHHHHHHh
Confidence 99999999999999998766 444444454444433322 223344 456666664
No 3
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=100.00 E-value=2.7e-74 Score=648.48 Aligned_cols=377 Identities=36% Similarity=0.627 Sum_probs=350.0
Q ss_pred HHHHHHHHHHHHhCCeeeehhhHhhcCcccCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhcccCcccccc
Q 004334 224 ALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDELSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAA 303 (760)
Q Consensus 224 ~~a~~lr~~l~~LGptfIKlGQ~lStR~DllP~e~~~eL~~Lqd~vpp~p~~~v~~iie~elG~~~~~iF~~fd~~PIas 303 (760)
..|++++++|++|||+|||+||++|||+|++|++||++|++|||++||+|+++++++++++||.+++++|.+||++|+|+
T Consensus 48 ~~~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp~~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd~~plas 127 (437)
T TIGR01982 48 SRGERLRLALEELGPTFIKFGQTLSTRADLLPADIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLAA 127 (437)
T ss_pred cHHHHHHHHHHHcCchhHHHhHHHHhCcccCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCCCcceee
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHH------HHHH
Q 004334 304 ASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY------QEAA 376 (760)
Q Consensus 304 aSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~------~EA~ 376 (760)
||+||||+|++ +|++||||||||++.+.+..|+.+|+.++.++++..+.. ...++..+++|+...+. +||+
T Consensus 128 aSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~--~~~~~~~~~~e~~~~l~~Eldf~~Ea~ 205 (437)
T TIGR01982 128 ASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDS--RRLRPTEVVKEFEKTLRRELDLRREAA 205 (437)
T ss_pred eehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccc--cccCHHHHHHHHHHHHHHHHCHHHHHH
Confidence 99999999999 799999999999999999999999999999999887653 34678888999888765 4699
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHP 456 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDpHP 456 (760)
|+++|++++++.+.+++|++|+++|++++|||||++|.++.++......+.++..++..+++.++.|+|.+|+||+||||
T Consensus 206 n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~H~D~hP 285 (437)
T TIGR01982 206 NASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFFHADLHP 285 (437)
T ss_pred HHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCceeCCCCc
Confidence 99999999999999999999999999999999999999999987666666788899999999999999999999999999
Q ss_pred CcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHHHHH
Q 004334 457 GNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEER 536 (760)
Q Consensus 457 GNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~~~~~~ 536 (760)
|||++++ +|+++++|||+++.++++.+..+.+++.++..+|++.+++.+.++|...+..|...+..++..+++.|.
T Consensus 286 gNilv~~--~g~i~liDfG~~~~l~~~~r~~l~~l~~a~~~~D~~~l~~~l~~~g~~~~~~d~~~~~~~~~~~~~~~~-- 361 (437)
T TIGR01982 286 GNIFVLK--DGKIIALDFGIVGRLSEEDRRYLAEILYGFLNRDYRRVAEVHFDAGYVPSDTDMAEFEQAIRAIGEPIF-- 361 (437)
T ss_pred ccEEECC--CCcEEEEeCCCeeECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHh--
Confidence 9999975 889999999999999999999999999999999999999999999999999999999999988877663
Q ss_pred HHHHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCchhhhhhhhhhhHHhhhcccCCCCCHH
Q 004334 537 LAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDIT 616 (760)
Q Consensus 537 l~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~~l~Ral~~lEGi~~~LdP~~d~~ 616 (760)
+.++. +.++++++.++++++++|++++|++|+++.|+++++||+++.|||+||++
T Consensus 362 -----------------~~~~~--------~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~L~p~~~~~ 416 (437)
T TIGR01982 362 -----------------GQPLK--------EISVGRLLAGLFKITRDFNMELQPQLLLLQKTLLTVEGVGRQLDPDLNMW 416 (437)
T ss_pred -----------------CCChh--------hCCHHHHHHHHHHHHHHCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence 12332 34677889999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHhhh
Q 004334 617 EIAKPYAMELLKFRE 631 (760)
Q Consensus 617 ~~a~P~~~~~l~~~~ 631 (760)
++++||+.+++.++.
T Consensus 417 ~~~~p~~~~~~~~~~ 431 (437)
T TIGR01982 417 KVAEPFVKRWIRKRL 431 (437)
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999887654
No 4
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=7.3e-64 Score=566.28 Aligned_cols=376 Identities=42% Similarity=0.639 Sum_probs=307.9
Q ss_pred HHHHHHHHHHHHhCCeeeehhhHhhcCcccCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhcccCcccccc
Q 004334 224 ALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDELSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAA 303 (760)
Q Consensus 224 ~~a~~lr~~l~~LGptfIKlGQ~lStR~DllP~e~~~eL~~Lqd~vpp~p~~~v~~iie~elG~~~~~iF~~fd~~PIas 303 (760)
..|++|+++++.|||+|||+||.+|||+|++|+||.++|+.|||++||+|++++.+++++|+|.+++++|.+||++|||+
T Consensus 92 ~~a~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~piaa 171 (538)
T KOG1235|consen 92 SAAERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPIAA 171 (538)
T ss_pred HHHHHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchhhh
Confidence 34699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHH------HHH
Q 004334 304 ASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ------EAA 376 (760)
Q Consensus 304 aSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~------EA~ 376 (760)
||+||||+|++ +|+.|||||||||+++.+..|+.+++.++.+++++.|. ++|..++||+.+.+.+ ||+
T Consensus 172 ASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~-----~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 172 ASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPD-----FDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred cchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcC-----CchhhHHHHHHhhhHhhcchHHHHH
Confidence 99999999999 79999999999999999999999999999999999886 4588999999998775 599
Q ss_pred HHHHHHHhcCCCC---ceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMD---YVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~---~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaD 453 (760)
|+++|+++|++.+ .|+||+|||++|+++|||||||+|++++|+..++..|+++..++..+.++|++|||.+||||||
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf~~GffHaD 326 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIFKTGFFHAD 326 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHHhcCCccCC
Confidence 9999999999998 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEecc--CCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDV--NGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~--~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
||||||+|++. ++++++++|||+++.++++.|..|+++|+++...|...|.+...++|... +.+...+.-++.. ..
T Consensus 327 PHPGNilv~~~~~~~~~ivllDhGl~~~is~~~r~~~~~~~~a~~~~d~~~~~~~~~~~g~~~-d~~~~~fa~~l~~-~~ 404 (538)
T KOG1235|consen 327 PHPGNILVRPNPEGDEEIVLLDHGLYAVISHKTRKDYAELWLALVFEDEKAMQALAEQLGLGL-DDLYPLFATALTG-RP 404 (538)
T ss_pred CCCCcEEEecCCCCCccEEEEcccccccccHHHHHHHHHHHHHHhcccHHHHHHHHHHhcccc-chhhhhhHHHHhC-Cc
Confidence 99999999953 36789999999999999999999999999999977777777777777654 3333222222111 00
Q ss_pred HHHHHHHHHhhhhhhhhhccCCCC--CCchHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCchhhhhhhhhhhHHhhhccc
Q 004334 532 SFEERLAAQRKEREITTQELGFKK--PLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGL 609 (760)
Q Consensus 532 ~~~~~l~~~~~~~~~~~~~~~f~~--~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~~l~Ral~~lEGi~~~L 609 (760)
+.... ..+... ....++... ........+..+.+.+. ++|..+.++.|+...+.|+-..+
T Consensus 405 -~~s~~------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~----~~p~~i~li~k~~~l~r~~~~~l 466 (538)
T KOG1235|consen 405 -WDSVI------------GAGITKYLKGLEEDADE-NQKIASAKFPGISQLLR----RMPREILLILKTNDLLRGLSSNL 466 (538)
T ss_pred -hhhcc------------ccchhhhhhhhhhhhhh-HHHHHHHHhhHHHHHHH----hchHhhhhhcccHHHHHhHHHHh
Confidence 00000 000000 000011111 11222333333443333 35999999999998888887777
Q ss_pred CCCC----CHHHhHHHHHH
Q 004334 610 DPRF----DITEIAKPYAM 624 (760)
Q Consensus 610 dP~~----d~~~~a~P~~~ 624 (760)
.-.. ++.+.++..+.
T Consensus 467 ~~~~~~~~~f~~~~~~~~~ 485 (538)
T KOG1235|consen 467 GIPSSLERSFLEMARLCLR 485 (538)
T ss_pred ccccccchHHHHHHHHHHH
Confidence 5444 45555555554
No 5
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=5.4e-54 Score=460.72 Aligned_cols=372 Identities=24% Similarity=0.367 Sum_probs=322.5
Q ss_pred HHHHHHHHHHHHHhCCeeeehhhHhhcCcccCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCC-ChhhhhcccCcccc
Q 004334 223 KALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDELSELQDQVPPFPSETAVSIVEEELGA-PLDDVFERFDVEPI 301 (760)
Q Consensus 223 ~~~a~~lr~~l~~LGptfIKlGQ~lStR~DllP~e~~~eL~~Lqd~vpp~p~~~v~~iie~elG~-~~~~iF~~fd~~PI 301 (760)
.-|.+.|..++|..||||||+|||+|||+|+||+++|.+|++|+.+|+|++|...++.++.++|. .++++|.+|++.||
T Consensus 118 ~lW~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~~~~~~eiF~efn~~PI 197 (565)
T KOG1236|consen 118 TLWLRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFGVKKIEEIFSEFNREPI 197 (565)
T ss_pred HHHHHHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCCCCchHHHHHHHHHHHCcCcHHHHHHhcCCccc
Confidence 34678899999999999999999999999999999999999999999999999999999999998 99999999999999
Q ss_pred ccccccEEEEEEEC-----------------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHH
Q 004334 302 AAASLGQVHRARLK-----------------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIY 364 (760)
Q Consensus 302 asaSiGQVhrA~l~-----------------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~ 364 (760)
|+|||||||+|+++ .+.|||||.||+++++|+.|+.||++.|+..+.++...+. ++...+
T Consensus 198 GsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~vP~l~wL---~l~~~v 274 (565)
T KOG1236|consen 198 GSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINNVPDLSWL---SLPLEV 274 (565)
T ss_pred ccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhhcCccccc---cCcchH
Confidence 99999999999761 1479999999999999999999999999998855332221 222233
Q ss_pred HHHHH------HHHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCC-CHHHHHHHHH
Q 004334 365 DECAS------VLYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGV-DRKRLGRYAV 437 (760)
Q Consensus 365 ~E~~~------~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~-d~~~la~~lv 437 (760)
+.|.- .+++||.++.+|..||++...|.+|+++..+.++.||+-+|.+|.++..+........ -.+.++..++
T Consensus 275 kqF~v~ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~v~~~v~~~~~pe~l~kkva~lg~ 354 (565)
T KOG1236|consen 275 KQFSVGLNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAPLHTDLVLVETYERGLSVLRFVKWKSQPEALVKKVAKLGV 354 (565)
T ss_pred HHHHHHHHhhcchhhhhhhhHHHHHhcccceeecCCcccccccccceeeeeccccccHHhhhhcccChHHHHHHHHHHHH
Confidence 33322 3578999999999999999999999999999999999999999999998765433221 3577888999
Q ss_pred HHHHHHHHhCCccccCCCCCcEEEeccCC-----------------------------------------CcEEEEeecc
Q 004334 438 ESYLEQILSHGFFHADPHPGNIAVDDVNG-----------------------------------------GRLIFYDFGM 476 (760)
Q Consensus 438 ~~~L~qI~~~GffHaDpHPGNILV~~~~~-----------------------------------------g~l~LiDFG~ 476 (760)
+++++|++.++|+|+|+|||||++...++ .+++++|-|+
T Consensus 355 ~AllkMl~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~~~i~~~L~~~~~e~~d~~~~~~~~~~~~P~lvflDtGi 434 (565)
T KOG1236|consen 355 NALLKMLIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKAEKASAIKRGLEWFRSEVRDARFTDSPDLEYEPTLVFLDTGI 434 (565)
T ss_pred HHHHHHHHhhcceecccCCCcEEEEecCCCccccccccchhhhHHhhhhhhhhhhhhhhhhhccccccCCCeEEEecchh
Confidence 99999999999999999999999975334 5799999999
Q ss_pred eeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCCCC
Q 004334 477 MGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEERLAAQRKEREITTQELGFKKP 556 (760)
Q Consensus 477 v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~f~~~ 556 (760)
+..+++..+.++..+|.|+++.|...+.+.+++........|.+.+.+.++.++..... + ..
T Consensus 435 v~kLs~qn~~N~l~lF~av~~~~Gy~ag~lml~~Sr~q~~~d~e~F~~kvEklv~~~~s------------t------~s 496 (565)
T KOG1236|consen 435 VTKLSHQNQMNLLSLFRAVARFDGYDAGELMLERSRQQQCIDPERFARKVEKLVLKARS------------T------KS 496 (565)
T ss_pred hhccChhhHHHHHHHHHHHHHhcchhHHHHHHhhcccccCCCHHHHHHHHHHHHHHhhh------------h------cc
Confidence 99999999999999999999999999999999988877778999888888777665321 0 01
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCchhhhhhhhhhhHHhhhcccCCCCCHHHhHHHHH
Q 004334 557 LSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYA 623 (760)
Q Consensus 557 l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~~l~Ral~~lEGi~~~LdP~~d~~~~a~P~~ 623 (760)
.+..++++++.+++.++++|++++.++|+.++-+++++||.+|+|||++|++....+|+
T Consensus 497 --------l~tl~i~~ll~em~tmvreH~V~ids~f~tvvlsilvlEG~gRqLdP~lDl~~~~~~~l 555 (565)
T KOG1236|consen 497 --------LRTLNIGDLLSEMFTMVREHHVRIDSNFTTVVLSILVLEGFGRQLDPDLDLFQLRTFLL 555 (565)
T ss_pred --------cCcCcHHHHHHHHHHHHHHhheeeccchHHHHHHHHHHhhhccccCCCcchhhhHHHHH
Confidence 12357899999999999999999999999999999999999999999999999444443
No 6
>KOG1234 consensus ABC (ATP binding cassette) 1 protein [General function prediction only]
Probab=100.00 E-value=1.1e-33 Score=291.05 Aligned_cols=342 Identities=23% Similarity=0.310 Sum_probs=273.4
Q ss_pred hhcC-cccCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhcccCccccccccccEEEEEEE-CCeeEEEEEe
Q 004334 247 FSTR-VDILAQEYVDELSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL-KGEEVVVKVQ 324 (760)
Q Consensus 247 lStR-~DllP~e~~~eL~~Lqd~vpp~p~~~v~~iie~elG~~~~~iF~~fd~~PIasaSiGQVhrA~l-~G~~VAVKVq 324 (760)
||-+ ..++|+...+.|++.++.+..||..++.+++..++|.+|.+-|++||+.|.+++||||||+|++ +|.+||||+|
T Consensus 2 LSiQD~~ll~p~l~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~~g~eVavKiQ 81 (363)
T KOG1234|consen 2 LSIQDGSLLPPTLGQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLADGPEVAVKIQ 81 (363)
T ss_pred cccccCCccCHHHHHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHhcCCCeeeeecC
Confidence 4444 3589999999999999999999999999999999999999999999999999999999999999 7999999999
Q ss_pred cCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHH------HHHHHHHHHHHHHHhcCCCCceeeceeee
Q 004334 325 RPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECAS------VLYQEAANAELFASNFKDMDYVKVPTIFW 398 (760)
Q Consensus 325 rPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~------~l~~EA~nl~~f~~~~~~~~~V~VP~vy~ 398 (760)
+||+.+.|+.|+..+..++++-.-+ |+..+ +...++-..+ .+.+||..+.+|+..+++++.+++|.|+.
T Consensus 82 YPGva~sI~SD~~nl~~lLn~s~ll-PkGLF----Ld~~i~~ArkEL~~ECDYqrEA~~~~kFr~LLs~~p~f~VP~Vv~ 156 (363)
T KOG1234|consen 82 YPGVARSIDSDANNLSRLLNFSGLL-PKGLF----LDVLIEVARKELKWECDYQREAASALKFRPLLSDDPNFYVPRVVD 156 (363)
T ss_pred CCchhhhccCcHHHHHHHHhhcccc-ccccc----HHHHHHHHHHhcccccchHHHHHHHhhhHHHhcCCCCcchhHHHH
Confidence 9999999999999999998865433 33211 1111111111 25678999999999999999999999999
Q ss_pred ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeeccee
Q 004334 399 EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMG 478 (760)
Q Consensus 399 e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~ 478 (760)
++||.++++||++.|.+|.....+.+ ..+..++..+++.+|+.||...|++.||+.+|++++. ...+|.|+|||.++
T Consensus 157 Elct~rvlt~el~~G~pid~~~~~sQ--~~rn~i~~~~l~lcLrEif~f~fMQTDPNWsNFly~~-~tk~i~LlDFGAsr 233 (363)
T KOG1234|consen 157 ELCTVRVLTLELGQGLPIDKTAKLSQ--ETRNYIGYKLLELCLREIFEFRFMQTDPNWSNFLYNG-RTKKIELLDFGASR 233 (363)
T ss_pred hhccchhhhhhhhcCccchhhhcccH--HHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHhccCC-CcceEEEEeccccc
Confidence 99999999999999999987654332 4578899999999999999999999999999999986 46789999999999
Q ss_pred ccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCCCCCc
Q 004334 479 SISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEERLAAQRKEREITTQELGFKKPLS 558 (760)
Q Consensus 479 ~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~f~~~l~ 558 (760)
.++.++-..|++++.+...+|.+.+.+.-.++|+++... ... |.+...+.... ..+.-...+.+.|++
T Consensus 234 ~y~~~F~d~Y~~~~~aaa~~dr~~v~e~S~~lgfLtg~E--s~~------m~DAHv~sv~i-lgepfa~~~pydF~~--- 301 (363)
T KOG1234|consen 234 EYGEKFIDKYIRLLKAAADRDREGVIEMSRELGFLTGYE--SKV------MEDAHVESVMI-LGEPFASDGPYDFGD--- 301 (363)
T ss_pred cccHHHHHHHHHHHHHHHhcchHHHHHHHHHhcccccch--HHH------HHHHhhhHhhh-ccccccCCCCcCcCc---
Confidence 999999999999999999999999999999999987532 111 11111110000 000000112233332
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCc-hhhhhhhhhhhHHhhhcccCCCCCHHH
Q 004334 559 KEEKIEKKKQRLAAIGEDLLAIAADQPFRFPA-TFTFVVRAFSVLDGIGKGLDPRFDITE 617 (760)
Q Consensus 559 ~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~-~~~~l~Ral~~lEGi~~~LdP~~d~~~ 617 (760)
..+..-++++..++.+|++..|| +-..+.|.+...-=+|..|...+.-.+
T Consensus 302 ---------q~~t~ri~~lipvmL~hRL~pPPeEtYsLHRklsG~fL~cakl~A~v~C~~ 352 (363)
T KOG1234|consen 302 ---------QTVTDRIQNLIPVMLRHRLCPPPEETYSLHRKLSGAFLLCAKLGATVPCRD 352 (363)
T ss_pred ---------cHHHHHHHhhhHHHHhccCCCCcHHHHHHHHHhhhHHHHHHHhcCCCcHHH
Confidence 34555567778888899998776 677799999888888888887776543
No 7
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=99.89 E-value=1.3e-23 Score=196.84 Aligned_cols=112 Identities=50% Similarity=0.811 Sum_probs=104.3
Q ss_pred HHhCCChhhhhcccCccccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchH
Q 004334 283 EELGAPLDDVFERFDVEPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWV 361 (760)
Q Consensus 283 ~elG~~~~~iF~~fd~~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~ 361 (760)
++||.+++++|++||++|+||||+||||+|++ +|++||||||||++.+.+..|+.+|+.++++++++.+.. ..++.
T Consensus 1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~---~~~~~ 77 (119)
T PF03109_consen 1 EELGKPIDEIFDEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFR---RLDLE 77 (119)
T ss_pred CCcCCCHHHHHHHCCcchhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHccccc---ccCHH
Confidence 47999999999999999999999999999999 799999999999999999999999999999999887653 57899
Q ss_pred HHHHHHHHHHH------HHHHHHHHHHHhcCCCCceeeceee
Q 004334 362 AIYDECASVLY------QEAANAELFASNFKDMDYVKVPTIF 397 (760)
Q Consensus 362 ~i~~E~~~~l~------~EA~nl~~f~~~~~~~~~V~VP~vy 397 (760)
.+++|+...+. +||+|+++|++++++.+.++||+||
T Consensus 78 ~~~~e~~~~l~~ElDf~~Ea~n~~~~~~~~~~~~~v~vP~vy 119 (119)
T PF03109_consen 78 EIVDEFRDSLLEELDFRREAANLERFRKNFADSPRVYVPKVY 119 (119)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCEecCCCC
Confidence 99999988876 4699999999999999999999987
No 8
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.79 E-value=7.9e-19 Score=176.64 Aligned_cols=180 Identities=17% Similarity=0.173 Sum_probs=118.4
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.+||+|++||||+|++ +|+.||||+.+|+.... ..+...+.....+... ....++..+..+ .+..|.++
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~---~~~~E~~~ 72 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSF-KDRDKYIEGDPRFRSR------YSKSNPRKLVFA---WAEKEFRN 72 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceE-eeHHHHhcCCcccccc------cccCCHHHHHHH---HHHHHHHH
Confidence 5899999999999999 69999999999985321 1111111110000000 001233333333 34579999
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCC---HHHHHHHHHHHHHHHHHh-CCccccC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVD---RKRLGRYAVESYLEQILS-HGFFHAD 453 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d---~~~la~~lv~~~L~qI~~-~GffHaD 453 (760)
+.++.. +++.+|.++.. ...+|||||++|..+.... +.....+ ...++..++. .+.++|. .|++|+|
T Consensus 73 l~~l~~-----~~i~~p~~~~~--~~~~lVmE~~~g~~~~~~~-l~~~~~~~~~~~~i~~~l~~-~l~~lH~~~givHrD 143 (190)
T cd05145 73 LKRLYE-----AGVPVPEPILL--KKNVLVMEFIGDDGSPAPR-LKDVPLEEEEAEELYEQVVE-QMRRLYQEAGLVHGD 143 (190)
T ss_pred HHHHHh-----CCCCCceEEEe--cCCEEEEEEecCCCchhhh-hhhccCCHHHHHHHHHHHHH-HHHHHHHhCCEecCC
Confidence 999854 45778888753 3569999999998543321 1222333 2344444443 3677888 9999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAM 507 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l 507 (760)
|||+||+++ +++++|+|||++..++... ..+++.+|++.+...+
T Consensus 144 lkP~NIll~---~~~~~liDFG~a~~~~~~~-------~~~~~~~~~~~~~~~~ 187 (190)
T cd05145 144 LSEYNILYH---DGKPYIIDVSQAVELDHPN-------ALEFLRRDIRNINRFF 187 (190)
T ss_pred CChhhEEEE---CCCEEEEEcccceecCCCC-------HHHHHHHHHHHHHHHh
Confidence 999999997 5889999999999998752 2345677877776654
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.78 E-value=2.2e-18 Score=186.43 Aligned_cols=187 Identities=17% Similarity=0.160 Sum_probs=134.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
.-||+||||.||+|++ +|..||||...-. .+-.+..+.+..|.+
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~----------------------------------~l~~k~~e~L~~Ei~ 61 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKK----------------------------------KLNKKLVELLLSEIK 61 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhh----------------------------------ccCHHHHHHHHHHHH
Confidence 4499999999999999 6999999964331 001122334556766
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHH--HHHHHHHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKR--LGRYAVESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~--la~~lv~~~L~qI~~~GffHaDp 454 (760)
.++.+. |..-|.+-.+. +..+..+||||||+|++|+++..... .+++.. .--..+...++.+|+.+++|+|+
T Consensus 62 iLkel~----H~nIV~l~d~~-~~~~~i~lVMEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDL 135 (429)
T KOG0595|consen 62 ILKELK----HPNIVRLLDCI-EDDDFIYLVMEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHENNIIHRDL 135 (429)
T ss_pred HHHhcC----CcceeeEEEEE-ecCCeEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence 676663 32334444444 45567899999999999999865332 233221 11122334577789999999999
Q ss_pred CCCcEEEecc-CC---CcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDV-NG---GRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~-~~---g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
||.|||+... .+ -.+++.|||+++.+.+.. +...+.|.+-+|++++...+-.+.+.|+++++.+++.++
T Consensus 136 KPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~-------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l 208 (429)
T KOG0595|consen 136 KPQNILLSTTARNDTSPVLKIADFGFARFLQPGS-------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCL 208 (429)
T ss_pred CcceEEeccCCCCCCCceEEecccchhhhCCchh-------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHH
Confidence 9999999852 11 369999999999998643 234456899999999999888899999999999887776
Q ss_pred HH
Q 004334 531 NS 532 (760)
Q Consensus 531 ~~ 532 (760)
..
T Consensus 209 ~g 210 (429)
T KOG0595|consen 209 TG 210 (429)
T ss_pred hC
Confidence 54
No 10
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.77 E-value=7.4e-18 Score=170.24 Aligned_cols=164 Identities=15% Similarity=0.151 Sum_probs=108.1
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
..||+|++|+||+|.+ +|++||||+.+++.......| ..+....++.. .....++..+..++ ...|+++
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~~---~~~E~~~ 72 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRD-RYVSGEFRFRH------GYCKSNPRKMVRTW---AEKEMRN 72 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHH-HhhcCCchhhc------cccCCCHHHHHHHH---HHHHHHH
Confidence 4799999999999998 799999999999754332222 11100011000 00123444444333 3579999
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHH-HhCCccccCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQI-LSHGFFHADP 454 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI-~~~GffHaDp 454 (760)
+.++.. +++..|.++. +...+|||||++|..+.... +....++...+..... ...+.++ |..|++|+||
T Consensus 73 l~~l~~-----~~v~~p~~~~--~~~~~iVmE~i~g~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDl 144 (190)
T cd05147 73 LKRLVT-----AGIPCPEPIL--LKSHVLVMEFIGDDGWAAPR-LKDAPLSESKARELYLQVIQIMRILYQDCRLVHADL 144 (190)
T ss_pred HHHHHH-----CCCCCCcEEE--ecCCEEEEEEeCCCCCcchh-hhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 999864 2345566653 34569999999997665432 2233455555554443 3557788 6899999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChh
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPN 483 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~ 483 (760)
||+||+++ +++++|+|||++...+..
T Consensus 145 kP~NIli~---~~~v~LiDFG~a~~~~~~ 170 (190)
T cd05147 145 SEYNLLYH---DGKLYIIDVSQSVEHDHP 170 (190)
T ss_pred CHHHEEEE---CCcEEEEEccccccCCCc
Confidence 99999997 478999999999866543
No 11
>smart00090 RIO RIO-like kinase.
Probab=99.69 E-value=1.9e-16 Score=165.42 Aligned_cols=186 Identities=18% Similarity=0.186 Sum_probs=127.3
Q ss_pred cccccccccEEEEEE-E--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRAR-L--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 299 ~PIasaSiGQVhrA~-l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
++||.|++|+||+|+ . +|++||||+.+++..+.-..+. +.... +.......++.. +....+..|+
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~---~~~~~~~~E~ 101 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDR--------YVDGD-FRFKYRKINPRK---LVRLWAEKEF 101 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhh--------hcccc-hhhccCCCCHHH---HHHHHHHHHH
Confidence 589999999999999 3 6999999999886533211100 00000 000000112222 2233467899
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCH---HHHHHHHHHHHHHHHHhCC-ccc
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDR---KRLGRYAVESYLEQILSHG-FFH 451 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~---~~la~~lv~~~L~qI~~~G-ffH 451 (760)
+++.++... .+.+|+++.. +..+|||||++|.++..... .....+. ..++..++ .++.++|.+| ++|
T Consensus 102 ~~L~~L~~~-----~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~-~~~~~~~~~~~~i~~qi~-~~l~~LH~~g~iiH 172 (237)
T smart00090 102 RNLQRLYEA-----GVPVPKPIAW--RRNVLVMEFIGGDGLPAPRL-KDVEPEEEEEFELYDDIL-EEMRKLYKEGELVH 172 (237)
T ss_pred HHHHHHHhc-----CCCCCeeeEe--cCceEEEEEecCCccccccc-ccCCcchHHHHHHHHHHH-HHHHHHHhcCCEEe
Confidence 999999642 4678888853 45699999999988765431 1112222 23444333 5588899999 999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCC
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVP 515 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~ 515 (760)
+|+||+||+++ +++++|+|||++...++... .++..+|.+.+...+.+.|..+.
T Consensus 173 ~Dikp~NIli~---~~~i~LiDFg~a~~~~~~~~-------~~~~~~d~~~~~~~~~~~~~~~~ 226 (237)
T smart00090 173 GDLSEYNILVH---DGKVVIIDVSQSVELDHPMA-------LEFLERDIRNIIRFFRRKGVDEL 226 (237)
T ss_pred CCCChhhEEEE---CCCEEEEEChhhhccCCcch-------HHHHHHHHHHHHHHHHHcCCCcC
Confidence 99999999997 57899999999998887654 35578999999999999998543
No 12
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.68 E-value=1.1e-15 Score=159.76 Aligned_cols=189 Identities=18% Similarity=0.234 Sum_probs=135.0
Q ss_pred cccCc-cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHH
Q 004334 294 ERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 370 (760)
Q Consensus 294 ~~fd~-~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~ 370 (760)
+.|+. ..+|.||||.||..+. +|.-+|+|+..-+ ++--|+.+ +.
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~-------~vVklKQv--------------------------eH 90 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQ-------KVVKLKQV--------------------------EH 90 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHH-------HHHHHHHH--------------------------HH
Confidence 45553 6899999999999999 5999999986431 11111111 12
Q ss_pred HHHHHHHHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhh-hhcCCCHHHHHHHHHHHHHHHHHhC
Q 004334 371 LYQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVESYLEQILSH 447 (760)
Q Consensus 371 l~~EA~nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l-~~~g~d~~~la~~lv~~~L~qI~~~ 447 (760)
..+|-+.+.... +|. +-+.++ ...+..+|||||++|+.|..+..- ........+.-..-+-..++.||..
T Consensus 91 ~~nEk~vL~~v~-----~PF--lv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~ 163 (355)
T KOG0616|consen 91 THNEKRVLKAVS-----HPF--LVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSL 163 (355)
T ss_pred HhhHHHHHhhcc-----Cce--eEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhc
Confidence 334444444331 121 222222 234567999999999999987542 2222233344444455678999999
Q ss_pred CccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004334 448 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 527 (760)
Q Consensus 448 GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~ 527 (760)
++++||+||+|||++. +|.|++.|||.+++++..+- .+.+++++++++.+...-....+|-++++..++
T Consensus 164 ~iiYRDLKPENiLlD~--~G~iKitDFGFAK~v~~rT~---------TlCGTPeYLAPEii~sk~ynkavDWWalGVLIY 232 (355)
T KOG0616|consen 164 DIIYRDLKPENLLLDQ--NGHIKITDFGFAKRVSGRTW---------TLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIY 232 (355)
T ss_pred CeeeccCChHHeeecc--CCcEEEEeccceEEecCcEE---------EecCCccccChHHhhcCCCCcchhHHHHHHHHH
Confidence 9999999999999986 89999999999999987632 246899999999999877788899999999998
Q ss_pred HHHHHH
Q 004334 528 FFLNSF 533 (760)
Q Consensus 528 ~~l~~~ 533 (760)
+|+..|
T Consensus 233 EMlaG~ 238 (355)
T KOG0616|consen 233 EMLAGY 238 (355)
T ss_pred HHHcCC
Confidence 887664
No 13
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.68 E-value=9.4e-16 Score=154.84 Aligned_cols=170 Identities=22% Similarity=0.263 Sum_probs=115.7
Q ss_pred ccccccccccEEEEEEE-CCeeEEEEEecCCchhh--HHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDL--FDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~--i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E 374 (760)
.++|+.|++|+||+|.. +|+.||||+.+++.... +..+.+ .... . ...............|
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~-------~~~~------~---~~~~~~~~~~~~~~~E 83 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRD-------YLGD------R---KHASWLYLSRLAAQKE 83 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHH-------HHhc------c---ccchhHHHhHHHHHHH
Confidence 36899999999999999 79999999987754111 110000 0000 0 0011112222334567
Q ss_pred HHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCC
Q 004334 375 AANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADP 454 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDp 454 (760)
...+..+.. ..+.+|.++. ....++||||++|.++.++... .....++..++.. +.++|..|++|+|+
T Consensus 84 ~~~l~~l~~-----~~i~v~~~~~--~~~~~lv~e~~~g~~L~~~~~~----~~~~~~~~~i~~~-l~~lh~~gi~H~Dl 151 (198)
T cd05144 84 FAALKALYE-----EGFPVPKPID--WNRHAVVMEYIDGVELYRVRVL----EDPEEVLDEILEE-IVKAYKHGIIHGDL 151 (198)
T ss_pred HHHHHHHHH-----cCCCCCceee--cCCceEEEEEeCCcchhhcccc----ccHHHHHHHHHHH-HHHHHHCCCCcCCC
Confidence 777777743 2256777775 3566999999999998875321 2334555555443 57789999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHH----HHHHHHHhh
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL----LEAFYGIYE 497 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l----~~l~~al~~ 497 (760)
||+||++++ +++++|+|||++..++.+.++.+ ...++++++
T Consensus 152 ~p~Nill~~--~~~~~liDfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (198)
T cd05144 152 SEFNILVDD--DEKIYIIDWPQMVSTDHPNAEELLDRDVENILRFFR 196 (198)
T ss_pred CcccEEEcC--CCcEEEEECCccccCCCccHHHHHHHHHHHHHHHHh
Confidence 999999985 78999999999999999888876 555555543
No 14
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.67 E-value=6.6e-16 Score=160.31 Aligned_cols=141 Identities=18% Similarity=0.316 Sum_probs=102.1
Q ss_pred cccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHH--HHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDEC--ASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~--~~~l~~EA~ 376 (760)
++++.|.+|.||.+..++..+|||+.+|..... + .....+ ...+.+||+
T Consensus 37 ~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~---~--------------------------~~~~~f~~g~~~e~Ea~ 87 (232)
T PRK10359 37 KVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRT---E--------------------------RFLKSFVKGDYYENLIV 87 (232)
T ss_pred EEecCCCceEEEEEecCCCcEEEEEechhcCch---H--------------------------HHHHhhhhhHHHHHHHH
Confidence 689999999999977778899999999864322 0 000000 122467888
Q ss_pred HHHHHHHhcCCCCceeeceeee--------ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--------EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHG 448 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--------e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~G 448 (760)
++.++.+ +++..|..+. .+++..+|||||++|.+|.++... +. ... ..+..++.++|.+|
T Consensus 88 ~l~rL~~-----~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~-----~~-~~~-~~i~~~l~~lH~~g 155 (232)
T PRK10359 88 QTDRVRS-----EGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPEI-----SE-DVK-AKIKASIESLHQHG 155 (232)
T ss_pred HHHHHHH-----CCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhhc-----cH-HHH-HHHHHHHHHHHHcC
Confidence 9998843 3445555441 235678999999999999886432 12 222 24455689999999
Q ss_pred ccccCCCCCcEEEeccCCCcEEEEeecceeccChh
Q 004334 449 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 483 (760)
Q Consensus 449 ffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~ 483 (760)
++|+||||+||++++ +| ++|+|||.+.....+
T Consensus 156 i~H~Dikp~Nili~~--~g-i~liDfg~~~~~~e~ 187 (232)
T PRK10359 156 MVSGDPHKGNFIVSK--NG-LRIIDLSGKRCTAQR 187 (232)
T ss_pred CccCCCChHHEEEeC--CC-EEEEECCCcccccch
Confidence 999999999999985 67 999999999887543
No 15
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.66 E-value=6.6e-16 Score=165.88 Aligned_cols=177 Identities=16% Similarity=0.213 Sum_probs=124.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
.-||+|+-|.||++++ +|+.+|+|+.+-++... +.+++.+|.+
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~-----------------------------------~~~Qi~rEl~ 129 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPA-----------------------------------LQKQILRELE 129 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHH-----------------------------------HHHHHHHHHH
Confidence 5799999999999999 59999999985543322 2334445544
Q ss_pred HHHHHHHhcCCCCc-eeeceeeeccCC-CeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHH---HHHHHHh-CCcc
Q 004334 377 NAELFASNFKDMDY-VKVPTIFWEYTT-PQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES---YLEQILS-HGFF 450 (760)
Q Consensus 377 nl~~f~~~~~~~~~-V~VP~vy~e~st-~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~---~L~qI~~-~Gff 450 (760)
.+.++ +.++ |.+-..+.. .. ...++||||+|++|+++.... ..+....++. ++.. -|.++|. ++++
T Consensus 130 il~~~-----~spyIV~~ygaF~~-~~~~isI~mEYMDgGSLd~~~k~~-g~i~E~~L~~-ia~~VL~GL~YLh~~~~II 201 (364)
T KOG0581|consen 130 ILRSC-----QSPYIVGFYGAFYS-NGEEISICMEYMDGGSLDDILKRV-GRIPEPVLGK-IARAVLRGLSYLHEERKII 201 (364)
T ss_pred HHhhC-----CCCCeeeEeEEEEe-CCceEEeehhhcCCCCHHHHHhhc-CCCCHHHHHH-HHHHHHHHHHHHhhccCee
Confidence 44443 2222 233333321 23 478999999999999975421 2233333333 2222 3677884 9999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 528 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~ 528 (760)
|||+||.||||+. .|.++|+|||..+.+... ++.. ..++..+|+++-++.+..+-..|+|+|+-.+-+
T Consensus 202 HRDIKPsNlLvNs--kGeVKicDFGVS~~lvnS----~a~t----fvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE 269 (364)
T KOG0581|consen 202 HRDIKPSNLLVNS--KGEVKICDFGVSGILVNS----IANT----FVGTSAYMSPERISGESYSVKSDIWSLGLSLLE 269 (364)
T ss_pred eccCCHHHeeecc--CCCEEeccccccHHhhhh----hccc----ccccccccChhhhcCCcCCcccceecccHHHHH
Confidence 9999999999986 899999999999998765 3333 357889999999988888888999999865433
No 16
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.65 E-value=1.5e-15 Score=167.83 Aligned_cols=185 Identities=19% Similarity=0.178 Sum_probs=137.2
Q ss_pred ccccccccEEEEEEECCee-EEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARLKGEE-VVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 300 PIasaSiGQVhrA~l~G~~-VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
-+|+|++|+||+|.++|+. ||||+..+.-... +....+.+|+..+
T Consensus 48 ~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~----------------------------------~~~~~f~~E~~il 93 (362)
T KOG0192|consen 48 VLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDD----------------------------------ESRKAFRREASLL 93 (362)
T ss_pred hcccCCceeEEEEEeCCceeEEEEEecchhcCh----------------------------------HHHHHHHHHHHHH
Confidence 3999999999999999998 9999877632111 0144567888888
Q ss_pred HHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhh-hhcCCCHHHHHHHHHHH--HHHHHHhCC-ccccCC
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVES--YLEQILSHG-FFHADP 454 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l-~~~g~d~~~la~~lv~~--~L~qI~~~G-ffHaDp 454 (760)
.++ +|.+-|.+..++.+-.....|||||++|++|.++... ....++.........+. .+..+|..+ ++|+|+
T Consensus 94 ~~l----~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDL 169 (362)
T KOG0192|consen 94 SRL----RHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDL 169 (362)
T ss_pred HhC----CCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeeccc
Confidence 875 3444455555553333347999999999999998765 34556666655555443 478899999 999999
Q ss_pred CCCcEEEeccCCC-cEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH--cCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGG-RLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ--MGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g-~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~--lG~~~~~~D~~al~~~~~~~l 530 (760)
||.|||++. ++ .++++|||+++...... ....-..+++..|++++++ -...+...|++++.-.+-+++
T Consensus 170 K~~NiLv~~--~~~~~KI~DFGlsr~~~~~~------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~ 240 (362)
T KOG0192|consen 170 KSDNILVDL--KGKTLKIADFGLSREKVISK------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELL 240 (362)
T ss_pred ChhhEEEcC--CCCEEEECCCccceeecccc------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHH
Confidence 999999986 65 89999999998776532 0111156889999999999 557788899999987665554
No 17
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.65 E-value=1e-15 Score=170.33 Aligned_cols=233 Identities=19% Similarity=0.258 Sum_probs=150.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+-+|.||+.+|++|+. +++.+||||.... ++-+ ..+... +..|-.
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~-----------------~Iik------e~KvkY----------V~~Ek~ 125 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVLDKR-----------------YIIK------EKKVKY----------VTREKE 125 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhhhHH-----------------HHHh------hcccch----------hhHHHH
Confidence 4699999999999999 5999999985331 0000 001111 123434
Q ss_pred HHHHHHHhcCCCCceeeceeeec--cCCCeEEEEeecCCCchhhhhh-hhhcCCCHHHHHHHHHHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIKINRIQS-LDELGVDRKRLGRYAVESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e--~st~~vLVME~ieG~~L~d~~~-l~~~g~d~~~la~~lv~~~L~qI~~~GffHaD 453 (760)
.|.++. ++|.| -+.|.. .....|.|+||++++.|-+++. .........+.-...+-..++.||.+|++|||
T Consensus 126 ~l~~L~----~hPgi--vkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRD 199 (604)
T KOG0592|consen 126 ALTQLS----GHPGI--VKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRD 199 (604)
T ss_pred HHHHhh----CCCCe--EEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceecc
Confidence 444443 44443 344433 3456799999999999988653 22211222222222333458999999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHH-------HHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREG-------LLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 526 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~-------l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~ 526 (760)
+||+|||++. |++++|.|||.++.+++..... ...-=.+-+.|+.++|.++++.-+..++..|+|+|.=++
T Consensus 200 lKPENILLd~--dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCil 277 (604)
T KOG0592|consen 200 LKPENILLDK--DGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCIL 277 (604)
T ss_pred CChhheeEcC--CCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHH
Confidence 9999999986 9999999999999998875541 011101234578899999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCchhhhhhhhhhh
Q 004334 527 QFFLNSFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSV 601 (760)
Q Consensus 527 ~~~l~~~~~~l~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~~l~Ral~~ 601 (760)
+.|+.. ...|... + =--+++.++.+.++.+--+|+...-|++-+++
T Consensus 278 yQmlaG-----------------~PPFra~-N-----------eyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv 323 (604)
T KOG0592|consen 278 YQMLAG-----------------QPPFRAA-N-----------EYLIFQKIQALDYEFPEGFPEDARDLIKKLLV 323 (604)
T ss_pred HHHhcC-----------------CCCCccc-c-----------HHHHHHHHHHhcccCCCCCCHHHHHHHHHHHc
Confidence 776643 1112211 0 01245666666666555566665556555543
No 18
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.63 E-value=2.6e-15 Score=167.22 Aligned_cols=196 Identities=19% Similarity=0.274 Sum_probs=127.0
Q ss_pred ccCc-cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 295 RFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 295 ~fd~-~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
+|+. ++||-|.||+||.|+- +|..+|+|+.+. +++--+..+. .+
T Consensus 142 DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkK-------S~M~~~~Qv~--------------------------hV 188 (550)
T KOG0605|consen 142 DFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKK-------SEMLKKNQVE--------------------------HV 188 (550)
T ss_pred cchhheeeccccceeEEEEEEccCCcEEeeecccH-------HHHHhhhhHH--------------------------HH
Confidence 4553 8999999999999998 699999998765 1221111111 11
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeeeccC--CCeEEEEeecCCCchhhhhhhhhcCCCHHHHHH-HHHH--HHHHHHHh
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFWEYT--TPQILTMEYVPGIKINRIQSLDELGVDRKRLGR-YAVE--SYLEQILS 446 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~e~s--t~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~-~lv~--~~L~qI~~ 446 (760)
+.|-..+. ....-.|-+.|..+. ...||+|||++|+.+..++.. .+.-+...++ .+++ .++.-||.
T Consensus 189 ~aERdiL~-------~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~--~~~L~e~~arfYiaE~vlAI~~iH~ 259 (550)
T KOG0605|consen 189 RAERDILA-------EVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMR--KDTLTEDWARFYIAETVLAIESIHQ 259 (550)
T ss_pred HHHHHHhh-------hcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHh--cCcCchHHHHHHHHHHHHHHHHHHH
Confidence 22222222 122234455665443 456999999999998876431 2222222221 2222 23677999
Q ss_pred CCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHH----------------------------------HHHH
Q 004334 447 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL----------------------------------LEAF 492 (760)
Q Consensus 447 ~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l----------------------------------~~l~ 492 (760)
+|++|+|+||.|+||+. .|.|+|.|||++.-+....+..+ ...+
T Consensus 260 ~gyIHRDIKPdNlLiD~--~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 337 (550)
T KOG0605|consen 260 LGYIHRDIKPDNLLIDA--KGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTW 337 (550)
T ss_pred cCcccccCChhheeecC--CCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHH
Confidence 99999999999999986 89999999999865433222111 1111
Q ss_pred -------HHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHHH
Q 004334 493 -------YGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFE 534 (760)
Q Consensus 493 -------~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~~~~ 534 (760)
..-..|++++|+++++.---.....|-++++-+++++|-.|.
T Consensus 338 ~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyP 386 (550)
T KOG0605|consen 338 KRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYP 386 (550)
T ss_pred HhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCC
Confidence 111358899999998765445778899999999988887663
No 19
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.62 E-value=5.3e-15 Score=146.92 Aligned_cols=164 Identities=23% Similarity=0.277 Sum_probs=106.7
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
++||+|++|+||+|++ +|++||||+.+|+.......+..++ ....... ...++..+... ....|..+
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~---~~~~~~~------~~~~~~~~~~~---~~~~e~~~ 70 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRT---GDYRFGR------KKSNWRYLSRL---WAEKEFRN 70 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhH---HHHHhcc------CCcchhhhhhH---HHHHHHHH
Confidence 4799999999999999 5999999999987544322222111 0111110 11222222221 22356667
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCC-----chhhhhhhhhcCCCHHHHHHHHHHHHHHHHHh-CCccc
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGI-----KINRIQSLDELGVDRKRLGRYAVESYLEQILS-HGFFH 451 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~-----~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~-~GffH 451 (760)
+.++... .+.+|+++. +...+|+|||++|. .+.+.... .....++..++ ..+..+|. .|++|
T Consensus 71 l~~l~~~-----~~~~~~~~~--~~~~~lv~e~~~g~~~~~~~l~~~~~~----~~~~~~~~~~~-~~l~~lh~~~~ivH 138 (187)
T cd05119 71 LKRLYEA-----GVPVPKPID--LNRHVLVMEFIGGDGIPAPRLKDVRLL----EDPEELYDQIL-ELMRKLYREAGLVH 138 (187)
T ss_pred HHHHHHc-----CCCCCceEe--cCCCEEEEEEeCCCCccChhhhhhhhc----ccHHHHHHHHH-HHHHHHhhccCcCc
Confidence 7776542 356787774 35679999999994 33332110 22333444433 44677888 99999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLL 489 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~ 489 (760)
+|+||+||+++ ++.++++|||++...+.+....+.
T Consensus 139 ~Dl~p~Nili~---~~~~~liDfg~a~~~~~~~~~~~~ 173 (187)
T cd05119 139 GDLSEYNILVD---DGKVYIIDVPQAVEIDHPNAEEFL 173 (187)
T ss_pred CCCChhhEEEE---CCcEEEEECcccccccCcchHHHH
Confidence 99999999997 688999999999999887766554
No 20
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.61 E-value=1.7e-15 Score=173.15 Aligned_cols=193 Identities=18% Similarity=0.199 Sum_probs=136.9
Q ss_pred cccCccccccccccEEEEEEE--CCeeEEEEEecCCc----hhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHH
Q 004334 294 ERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGL----KDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDEC 367 (760)
Q Consensus 294 ~~fd~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi----~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~ 367 (760)
.++..+-+|.|.+|+||+++. +|+.||||+.++.. .+..-
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~---------------------------------- 59 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWC---------------------------------- 59 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHH----------------------------------
Confidence 344556899999999999997 69999999876621 12222
Q ss_pred HHHHHHHHHHHHHHHHhcCCC-Cceeeceeee--ccCCCeEEEEeecCCCchhhhhhh--hhcCCCHHHHHHHHH--HHH
Q 004334 368 ASVLYQEAANAELFASNFKDM-DYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSL--DELGVDRKRLGRYAV--ESY 440 (760)
Q Consensus 368 ~~~l~~EA~nl~~f~~~~~~~-~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l--~~~g~d~~~la~~lv--~~~ 440 (760)
.|...++++. +++. ..+.||..-. --+...||+||||.|++|...... ...|+...++...+. ...
T Consensus 60 -----~EieilkKLn--h~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~a 132 (732)
T KOG4250|consen 60 -----REIEILKKLN--HPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSA 132 (732)
T ss_pred -----HHHHHHHHcC--chhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHH
Confidence 2333333331 1110 1112222111 124567999999999999987643 345666666666553 455
Q ss_pred HHHHHhCCccccCCCCCcEEEeccCCCc--EEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCC
Q 004334 441 LEQILSHGFFHADPHPGNIAVDDVNGGR--LIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTG 517 (760)
Q Consensus 441 L~qI~~~GffHaDpHPGNILV~~~~~g~--l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~-lG~~~~~~ 517 (760)
++.++++|++|||+|||||++-...+|+ -+|+|||.++.+++... ..-+.|+.+++.+.+.+ -+..+..+
T Consensus 133 l~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~-------~~S~vGT~~YLhPel~E~q~~y~~tV 205 (732)
T KOG4250|consen 133 LRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSL-------FTSLVGTEEYLHPELYERQKKYTATV 205 (732)
T ss_pred HHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCe-------eeeecCchhhcChHHHhhccCcCcee
Confidence 8889999999999999999987644565 58999999999998761 22345899999999999 48888899
Q ss_pred ChHHHHHHHHHHHHHHH
Q 004334 518 DTTAVRRTAQFFLNSFE 534 (760)
Q Consensus 518 D~~al~~~~~~~l~~~~ 534 (760)
|.++++-.+++....+.
T Consensus 206 DLWS~GvtlY~caTG~l 222 (732)
T KOG4250|consen 206 DLWSFGVTLYECATGEL 222 (732)
T ss_pred ehhhhhhHHHHHhccCC
Confidence 99999999888766543
No 21
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.61 E-value=3.6e-15 Score=160.17 Aligned_cols=191 Identities=18% Similarity=0.230 Sum_probs=132.0
Q ss_pred cccCc-cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHH
Q 004334 294 ERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 370 (760)
Q Consensus 294 ~~fd~-~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~ 370 (760)
+.|+. +.||.||||+|+..+. +|+-+|+||.+.. .++++ .| .+.
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~----------------~iv~~----------------~e-~~~ 71 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKK----------------KIVEK----------------KE-VRH 71 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhh----------------Hhhhh----------------hh-HHH
Confidence 45654 7899999999999998 5999999986541 11100 11 123
Q ss_pred HHHHHHHHHHHHHhcCCCCceeeceee-eccCCCeEEEEeecCCCchhhhhh-hhhcCCCHHHHHHHHHHHHHHHHHhCC
Q 004334 371 LYQEAANAELFASNFKDMDYVKVPTIF-WEYTTPQILTMEYVPGIKINRIQS-LDELGVDRKRLGRYAVESYLEQILSHG 448 (760)
Q Consensus 371 l~~EA~nl~~f~~~~~~~~~V~VP~vy-~e~st~~vLVME~ieG~~L~d~~~-l~~~g~d~~~la~~lv~~~L~qI~~~G 448 (760)
+..|...++++ ++|. .|.-.| ++-..+.+||+||+.|+.|.-.+. ......++.++--.-+...+..+|+.|
T Consensus 72 ~~~Er~IL~~v-----~hPF-iv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~g 145 (357)
T KOG0598|consen 72 TKAERNILSKI-----KHPF-IVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKG 145 (357)
T ss_pred HHHHHHHHHhC-----CCCc-EeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCC
Confidence 34455555543 2332 233333 233456799999999999875332 222333444443334456689999999
Q ss_pred ccccCCCCCcEEEeccCCCcEEEEeecceec-cChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004334 449 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGS-ISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 527 (760)
Q Consensus 449 ffHaDpHPGNILV~~~~~g~l~LiDFG~v~~-l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~ 527 (760)
++|||+||+|||++. +|.++|.|||+++. +....... -+.+++++|+++++.-.-....+|-++++..++
T Consensus 146 IiyRDlKPENILLd~--~GHi~LtDFgL~k~~~~~~~~t~-------tfcGT~eYmAPEil~~~gy~~~vDWWsLGillY 216 (357)
T KOG0598|consen 146 IIYRDLKPENILLDE--QGHIKLTDFGLCKEDLKDGDATR-------TFCGTPEYMAPEILLGKGYDKAVDWWSLGILLY 216 (357)
T ss_pred eeeccCCHHHeeecC--CCcEEEeccccchhcccCCCccc-------cccCCccccChHHHhcCCCCcccchHhHHHHHH
Confidence 999999999999986 89999999999984 33322211 145899999999988777788999999999888
Q ss_pred HHHHH
Q 004334 528 FFLNS 532 (760)
Q Consensus 528 ~~l~~ 532 (760)
+|+..
T Consensus 217 eML~G 221 (357)
T KOG0598|consen 217 EMLTG 221 (357)
T ss_pred HHhhC
Confidence 87643
No 22
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.60 E-value=8.8e-15 Score=160.87 Aligned_cols=190 Identities=17% Similarity=0.164 Sum_probs=124.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||+.+..-.. -.+....+..|..
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---------------------------------~~~~~~~~~~E~~ 53 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADML---------------------------------EKEQVGHIRAERD 53 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHH---------------------------------HhhHHHHHHHHHH
Confidence 6799999999999998 5899999987541000 0011123344544
Q ss_pred HHHHHHHhcCCCCceeeceeeec--cCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e--~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
.+.++ +++ .+++.+.. .....+|||||++|++|.++.... ..++...+...+ +-..+..+|..|++|+
T Consensus 54 il~~~-----~~~--~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~givHr 125 (363)
T cd05628 54 ILVEA-----DSL--WVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIHQLGFIHR 125 (363)
T ss_pred HHHhC-----CCC--CcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEec
Confidence 44443 222 23444432 234579999999999998865322 223333332222 2234788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHH-----------------------------HHHHhhcCHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEA-----------------------------FYGIYEKDADKV 503 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l-----------------------------~~al~~~D~~~v 503 (760)
|+||.|||++. ++.++|+|||++..+....+..+... ...-..++..++
T Consensus 126 DlKp~NILi~~--~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~ 203 (363)
T cd05628 126 DIKPDNLLLDS--KGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYI 203 (363)
T ss_pred CCCHHHeEECC--CCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCcccc
Confidence 99999999985 78999999999987654322111000 001124677888
Q ss_pred HHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 504 LQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 504 ~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+++++..+..+...|+++++-.+.+++.
T Consensus 204 aPE~~~~~~~~~~~DvwSlGvil~ell~ 231 (363)
T cd05628 204 APEVFMQTGYNKLCDWWSLGVIMYEMLI 231 (363)
T ss_pred CHHHHcCCCCCCchhhhhhHHHHHHHHh
Confidence 9998877667788999999988776654
No 23
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.59 E-value=2.1e-14 Score=145.31 Aligned_cols=144 Identities=19% Similarity=0.309 Sum_probs=106.2
Q ss_pred cccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHH-HHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDEC-ASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~-~~~l~~EA~n 377 (760)
++||.|++|.||+|+..|..|+||+..|.....-..| ... ...+.+|+++
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~-----------------------------~~~~~~~~~~E~~~ 52 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELD-----------------------------ERIRRERTRREARI 52 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHH-----------------------------HHHHHHHHHHHHHH
Confidence 4789999999999999999999999877432211111 111 1234567777
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPG 457 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDpHPG 457 (760)
+..+.. +++.+|.++....+..+++|||++|.+|.++...... ....++..+. ..+.++|..|++|+|+||+
T Consensus 53 l~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~~--~~~~i~~~i~-~~l~~lH~~~i~H~Dl~p~ 124 (211)
T PRK14879 53 MSRARK-----AGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNGM--EELELSREIG-RLVGKLHSAGIIHGDLTTS 124 (211)
T ss_pred HHHHHH-----CCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhccH--HHHHHHHHHH-HHHHHHHhCCcccCCCCcc
Confidence 777643 4578888887677788999999999999987542211 3334444443 4588999999999999999
Q ss_pred cEEEeccCCCcEEEEeecceeccCh
Q 004334 458 NIAVDDVNGGRLIFYDFGMMGSISP 482 (760)
Q Consensus 458 NILV~~~~~g~l~LiDFG~v~~l~~ 482 (760)
||+++ ++.++++|||.++..++
T Consensus 125 Nil~~---~~~~~liDf~~a~~~~~ 146 (211)
T PRK14879 125 NMILS---GGKIYLIDFGLAEFSKD 146 (211)
T ss_pred cEEEE---CCCEEEEECCcccCCCc
Confidence 99997 57899999999887543
No 24
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.59 E-value=1.3e-15 Score=165.10 Aligned_cols=194 Identities=18% Similarity=0.204 Sum_probs=127.8
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.+.+|+|.||.|-.|.. +|+.||||+.+..--. +... ..-.. ....+|+
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~------------------------~~s~---~~~~~--~~v~~Ei 227 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKST------------------------GCSR---AIAKT--RDVQNEI 227 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcc------------------------cccc---cccch--hhhHHHH
Confidence 46899999999999998 6999999997652100 0000 00000 1145677
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhh-hhhcCCCH-HHHHHHHHHHHHHHHHhCCccccC
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQS-LDELGVDR-KRLGRYAVESYLEQILSHGFFHAD 453 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~-l~~~g~d~-~~la~~lv~~~L~qI~~~GffHaD 453 (760)
..|+++ ++|.|.--+-+.+-....||||||++|+.|.|... ....+.+. +.+...++ ..++++|+.|+.|||
T Consensus 228 eILkkL-----~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll-~avkYLH~~GI~HRD 301 (475)
T KOG0615|consen 228 EILKKL-----SHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLL-TAVKYLHSQGIIHRD 301 (475)
T ss_pred HHHHhc-----CCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHH-HHHHHHHHcCccccc
Confidence 777766 34443333333344455699999999999998542 22222222 33333333 347889999999999
Q ss_pred CCCCcEEEecc-CCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCC---CCChHHHHHHHHHH
Q 004334 454 PHPGNIAVDDV-NGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVP---TGDTTAVRRTAQFF 529 (760)
Q Consensus 454 pHPGNILV~~~-~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~---~~D~~al~~~~~~~ 529 (760)
+||+|||+... .+-.+++.|||+++..... .+++. ..+++.+++++.+.-+-..- .+|+|+++-.++-.
T Consensus 302 iKPeNILl~~~~e~~llKItDFGlAK~~g~~---sfm~T----lCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvc 374 (475)
T KOG0615|consen 302 IKPENILLSNDAEDCLLKITDFGLAKVSGEG---SFMKT----LCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVC 374 (475)
T ss_pred CCcceEEeccCCcceEEEecccchhhccccc---eehhh----hcCCccccChhheecCCeecccchheeeeccceEEEE
Confidence 99999999852 2357999999999988643 23333 35799999999887654332 45999988777666
Q ss_pred HHHH
Q 004334 530 LNSF 533 (760)
Q Consensus 530 l~~~ 533 (760)
+..|
T Consensus 375 LsG~ 378 (475)
T KOG0615|consen 375 LSGY 378 (475)
T ss_pred eccC
Confidence 6654
No 25
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.59 E-value=2.2e-15 Score=166.26 Aligned_cols=196 Identities=17% Similarity=0.166 Sum_probs=143.1
Q ss_pred ChhhhhcccCccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHH
Q 004334 288 PLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYD 365 (760)
Q Consensus 288 ~~~~iF~~fd~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~ 365 (760)
++..+|.-|.++.+|||-||.||-|.+ +|++|||||...- ++.++ .
T Consensus 559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKl--------------------rFp~k------------q 606 (888)
T KOG4236|consen 559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKL--------------------RFPTK------------Q 606 (888)
T ss_pred hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecc--------------------cCCCc------------h
Confidence 466788888888999999999999999 6999999986431 12111 1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH---HHHHHH
Q 004334 366 ECASVLYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA---VESYLE 442 (760)
Q Consensus 366 E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l---v~~~L~ 442 (760)
+..+++|.+.++.+ ++|.|.--....+-..+.+.|||-+.|.-|.-+...+.. --+.++...+ +-..|+
T Consensus 607 --esqlR~EVaILq~l-----~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkg-RL~er~TkFlvtQIL~ALr 678 (888)
T KOG4236|consen 607 --ESQLRNEVAILQNL-----HHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKG-RLPERITKFLVTQILVALR 678 (888)
T ss_pred --HHHHHHHHHHHHhc-----CCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcc-cchHHHHHHHHHHHHHHHH
Confidence 24577787777765 567777777777777788999999999777655543332 2233333332 234478
Q ss_pred HHHhCCccccCCCCCcEEEeccC-CCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHH
Q 004334 443 QILSHGFFHADPHPGNIAVDDVN-GGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTA 521 (760)
Q Consensus 443 qI~~~GffHaDpHPGNILV~~~~-~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~a 521 (760)
.+|..|++|||+||.|||+.... -.+++|+|||.++.+.++.- ..-+.+++.+++++.+...-.....|+++
T Consensus 679 ~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF-------RrsVVGTPAYLaPEVLrnkGyNrSLDMWS 751 (888)
T KOG4236|consen 679 YLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF-------RRSVVGTPAYLAPEVLRNKGYNRSLDMWS 751 (888)
T ss_pred HhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhh-------hhhhcCCccccCHHHHhhcccccccccee
Confidence 89999999999999999997522 25899999999999987632 22346899999999887755677889998
Q ss_pred HHHHHHHHH
Q 004334 522 VRRTAQFFL 530 (760)
Q Consensus 522 l~~~~~~~l 530 (760)
+..+++.-+
T Consensus 752 VGVIiYVsL 760 (888)
T KOG4236|consen 752 VGVIIYVSL 760 (888)
T ss_pred eeEEEEEEe
Confidence 886655433
No 26
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.59 E-value=1.4e-14 Score=157.11 Aligned_cols=183 Identities=16% Similarity=0.128 Sum_probs=124.9
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||+|++|.||+|+. +|+.||||+.+..- +. . .+....+.+|+.
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~------~--------------------~~~~~~~~~E~~ 70 (329)
T PTZ00263 24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKRE-------IL------K--------------------MKQVQHVAQEKS 70 (329)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-------Hh------h--------------------hhhHHHHHHHHH
Confidence 6899999999999999 58999999876410 00 0 001122345655
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHaDp 454 (760)
.+.++ .+..-+.+...+ ......+++|||++|++|.+..... ..+....+... .+-..+..+|..|++|+|+
T Consensus 71 ~l~~l----~hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dl 144 (329)
T PTZ00263 71 ILMEL----SHPFIVNMMCSF-QDENRVYFLLEFVVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDL 144 (329)
T ss_pred HHHhC----CCCCCCcEEEEE-EcCCEEEEEEcCCCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence 55554 222222222222 3446679999999999998765321 12222222211 1223478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
||.||+++. ++.++|+|||++..+++... ...+.+.++++++......+...|++++...+.+++.
T Consensus 145 kp~NIll~~--~~~~kl~Dfg~~~~~~~~~~---------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt 210 (329)
T PTZ00263 145 KPENLLLDN--KGHVKVTDFGFAKKVPDRTF---------TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIA 210 (329)
T ss_pred CHHHEEECC--CCCEEEeeccCceEcCCCcc---------eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHc
Confidence 999999985 88999999999988765432 1246788899998887777788999999988776653
No 27
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.58 E-value=1.7e-14 Score=164.65 Aligned_cols=230 Identities=18% Similarity=0.154 Sum_probs=160.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..+|-||||.|+.|.+ +++.+|||+++.+.- +.. |+. +.+..|.+
T Consensus 374 ~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~I--l~~------------------------------d~V-e~~~~Ekr 420 (694)
T KOG0694|consen 374 AVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDI--LQR------------------------------DEV-ESLMCEKR 420 (694)
T ss_pred EEeccCcCceEEEEEEcCCCcEEEEEEeeccce--ecc------------------------------ccH-HHHHHHHH
Confidence 5799999999999999 588999999987521 111 111 12344444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHP 456 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDpHP 456 (760)
.++... .+|.+.--..-+.-.+..+.||||+.|+.+..+...+.....+.++-..-+-..|+.+|++|+++||+|-
T Consensus 421 I~~la~----~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKL 496 (694)
T KOG0694|consen 421 IFELAN----RHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKL 496 (694)
T ss_pred HHHHhc----cCCeEeecccccccCCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecch
Confidence 444332 3343332222334445679999999999977665545555556666666667779999999999999999
Q ss_pred CcEEEeccCCCcEEEEeecceeccC-hhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHHHH
Q 004334 457 GNIAVDDVNGGRLIFYDFGMMGSIS-PNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEE 535 (760)
Q Consensus 457 GNILV~~~~~g~l~LiDFG~v~~l~-~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~~~~~ 535 (760)
.|||++. +|.++|+||||++.-- ...+ .+-+-+++++|+++++.-+..+..+|-++++..+++|+-.
T Consensus 497 dNiLLD~--eGh~kiADFGlcKe~m~~g~~-------TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~G--- 564 (694)
T KOG0694|consen 497 DNLLLDT--EGHVKIADFGLCKEGMGQGDR-------TSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVG--- 564 (694)
T ss_pred hheEEcc--cCcEEecccccccccCCCCCc-------cccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcC---
Confidence 9999986 9999999999998753 2222 2335689999999999988889999999999888776532
Q ss_pred HHHHHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCchhhhhhhhhhhHH
Q 004334 536 RLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLD 603 (760)
Q Consensus 536 ~l~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~~l~Ral~~lE 603 (760)
+..|.. ++| .+++..|+.-=..|++.++.+.+.++|.+++-.
T Consensus 565 --------------q~PF~g--ddE----------ee~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~ 606 (694)
T KOG0694|consen 565 --------------ESPFPG--DDE----------EEVFDSIVNDEVRYPRFLSKEAIAIMRRLLRKN 606 (694)
T ss_pred --------------CCCCCC--CCH----------HHHHHHHhcCCCCCCCcccHHHHHHHHHHhccC
Confidence 222211 111 134444444445688899999999999887654
No 28
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.58 E-value=2.9e-15 Score=164.67 Aligned_cols=184 Identities=17% Similarity=0.285 Sum_probs=128.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|.|+||.||+|+- +|+.||||-.+.. + +.| +|+.. .+|.+
T Consensus 16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~K---------------------f--------~s~----ee~~n--LREvk 60 (538)
T KOG0661|consen 16 RKLGDGTFGSVYLAKSKETGELVAIKKMKKK---------------------F--------YSW----EECMN--LREVK 60 (538)
T ss_pred HHhcCCcceeEEEeeecCCCceeeHHHHHhh---------------------h--------ccH----HHHHH--HHHHH
Confidence 4699999999999998 6999999943221 1 112 22221 34555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHH--HHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESY--LEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~--L~qI~~~GffHaDp 454 (760)
.+.++ -.|..-|.+-+|+.+-....++|||||+- .|.++...+..-+....+...+.+.+ |..||.+||||||+
T Consensus 61 sL~kl---n~hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDl 136 (538)
T KOG0661|consen 61 SLRKL---NPHPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDL 136 (538)
T ss_pred HHHhc---CCCCcchhhHHHhhccCceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccC
Confidence 55554 23445577777887776688999999973 56666655544445455444443333 77899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~ 529 (760)
||+||||.. ..-|+|.|||+++.+.... -|.+.+ .--+..+-+.|++-|..+...|+++++-++.++
T Consensus 137 KPENiLi~~--~~~iKiaDFGLARev~Skp--PYTeYV----STRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl 203 (538)
T KOG0661|consen 137 KPENILISG--NDVIKIADFGLAREVRSKP--PYTEYV----STRWYRAPEVLLRSGYYSSPVDMWAVGCIMAEL 203 (538)
T ss_pred ChhheEecc--cceeEecccccccccccCC--Ccchhh----hcccccchHHhhhccccCCchHHHHHHHHHHHH
Confidence 999999985 5689999999999986542 222222 123455677889999999999999999776654
No 29
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.58 E-value=7.5e-15 Score=159.06 Aligned_cols=182 Identities=20% Similarity=0.202 Sum_probs=121.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|+. +|+.||||+.+...... ......+.+|..
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---------------------------------~~~~~~~~~e~~ 53 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFK---------------------------------LNEVRHVLTERD 53 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhh---------------------------------hhHHHHHHHHHH
Confidence 5799999999999999 58999999876421000 000112334544
Q ss_pred HHHHHHHhcCCCCc-eeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~-V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHaD 453 (760)
.+..+ . +++ +.+... .......+|||||++|++|.++.... ..+....+... .+-..+..+|..|++|+|
T Consensus 54 ~l~~~----~-h~~iv~~~~~-~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~d 126 (333)
T cd05600 54 ILTTT----K-SEWLVKLLYA-FQDDEYLYLAMEYVPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHELGYIHRD 126 (333)
T ss_pred HHHhC----C-CCCCccEEEE-EEcCCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 44443 1 222 222222 23345679999999999999876322 12233222221 222347889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+||.||+++. ++.++|+|||++....... .-..+++.++++++......+...|+++++-.+.+++.
T Consensus 127 lkp~Nil~~~--~~~~kL~Dfg~a~~~~~~~---------~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~ 193 (333)
T cd05600 127 LKPENFLIDA--SGHIKLTDFGLSKGIVTYA---------NSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLC 193 (333)
T ss_pred CCHHHEEECC--CCCEEEEeCcCCccccccc---------CCcccCccccChhHhcCCCCCCccceecchHHHhhhhh
Confidence 9999999985 8899999999998765411 11235677888888877767788999999988777653
No 30
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.58 E-value=1.7e-14 Score=160.03 Aligned_cols=187 Identities=19% Similarity=0.239 Sum_probs=129.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..||+|+||.|+.|+. +|+.||||+....... ... ......+.+|..
T Consensus 23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~--------------------~~~-----------~~~~~~i~rEi~ 71 (370)
T KOG0583|consen 23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVS--------------------SKS-----------QKLDELIKREIS 71 (370)
T ss_pred eeecCCCCeeEEEeeeccCCCeEEEEEechhccc--------------------ccc-----------cccchhhHHHHH
Confidence 6899999999999988 6999999986552000 000 001122335666
Q ss_pred HHHHHHHhcCCCCc-eeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH---HHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE---SYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~-V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~---~~L~qI~~~GffHa 452 (760)
++++++ ++++ +.+-.++ +..+..++||||+.|+.|.+.... ...+.. ..++.... ..+.++|..|++||
T Consensus 72 ~~~~~~----~HpnI~~l~ev~-~t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E-~~ar~~F~Qlisav~y~H~~gi~HR 144 (370)
T KOG0583|consen 72 ILRRLR----SHPNIIRLLEVF-ATPTKIYIVMEYCSGGDLFDYIVN-KGRLKE-DEARKYFRQLISAVAYCHSRGIVHR 144 (370)
T ss_pred HHHHhc----cCCCEeEEEEEE-ecCCeEEEEEEecCCccHHHHHHH-cCCCCh-HHHHHHHHHHHHHHHHHHhCCEeeC
Confidence 666663 2333 3444444 455668999999999999886643 222222 33333322 33677899999999
Q ss_pred CCCCCcEEEeccCC-CcEEEEeecceeccC-hhhHHHHHHHHHHHhhcCHHHHHHHHHHc-C-CCCCCCChHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNG-GRLIFYDFGMMGSIS-PNIREGLLEAFYGIYEKDADKVLQAMVQM-G-VLVPTGDTTAVRRTAQF 528 (760)
Q Consensus 453 DpHPGNILV~~~~~-g~l~LiDFG~v~~l~-~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G-~~~~~~D~~al~~~~~~ 528 (760)
|+||+||+++. + +.++|+|||++...+ +.. + ..-..+.+.+++++++.. + +.....|+|+++..++.
T Consensus 145 DLK~ENilld~--~~~~~Kl~DFG~s~~~~~~~~---~----l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ 215 (370)
T KOG0583|consen 145 DLKPENILLDG--NEGNLKLSDFGLSAISPGEDG---L----LKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYV 215 (370)
T ss_pred CCCHHHEEecC--CCCCEEEeccccccccCCCCC---c----ccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHH
Confidence 99999999986 4 899999999999884 221 1 233467899999999886 5 56678899999988877
Q ss_pred HHHH
Q 004334 529 FLNS 532 (760)
Q Consensus 529 ~l~~ 532 (760)
++..
T Consensus 216 ml~G 219 (370)
T KOG0583|consen 216 LLCG 219 (370)
T ss_pred HHhC
Confidence 6643
No 31
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.57 E-value=1.6e-14 Score=156.77 Aligned_cols=185 Identities=14% Similarity=0.111 Sum_probs=121.1
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.||.|++|+||+|+. +|+.||||+.++..... .+....+.+|.+.
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~~~~~~~E~~~ 48 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIA---------------------------------KDEVAHTLTESRV 48 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhHHHHHHHHHHH
Confidence 589999999999998 58999999976521100 0001123345544
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPH 455 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDpH 455 (760)
+..+ +++++.-...+.......+|||||++|++|.+..... ..++...+.... +-..+..+|..|++|+|+|
T Consensus 49 l~~l-----~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDik 122 (328)
T cd05593 49 LKNT-----RHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLK 122 (328)
T ss_pred HHhC-----CCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccC
Confidence 4443 2233222222223445679999999999997754322 123333322222 2234788999999999999
Q ss_pred CCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 456 PGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 456 PGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
|.||+++. ++.++|+|||++......... .....+...++++++...+..++..|++++...+.+++.
T Consensus 123 p~NIll~~--~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt 190 (328)
T cd05593 123 LENLMLDK--DGHIKITDFGLCKEGITDAAT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 190 (328)
T ss_pred HHHeEECC--CCcEEEecCcCCccCCCcccc------cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhh
Confidence 99999985 889999999998764322110 011246777888988877777788999999987776653
No 32
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.57 E-value=3.5e-14 Score=160.32 Aligned_cols=184 Identities=16% Similarity=0.181 Sum_probs=128.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
.-||.|+||+||+++. +|+.||+||..... +.+ ......+.+|.+
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~-----------------l~k----------------~~~reKv~~EIe 70 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKL-----------------LKK----------------PKQREKVLNEIE 70 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehHH-----------------hcC----------------cchHHHHHHHHH
Confidence 5799999999999998 69999999864310 000 001112333432
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
+.+.++|.+-|.+-. +.|.++.-|||.|.|+-.+|..+.. ....++..+....+ +-..++++|.+|++|||+
T Consensus 71 ----IHr~L~HpnIV~f~~-~FEDs~nVYivLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDL 144 (592)
T KOG0575|consen 71 ----IHRSLKHPNIVQFYH-FFEDSNNVYIVLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDL 144 (592)
T ss_pred ----HHHhcCCCcEEeeee-EeecCCceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCceeccc
Confidence 223333433333333 3356777899999999999999875 22333333332222 233477899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChh-hHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPN-IREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~-~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|-||||+++ +-.+++.|||++..+..+ +|.. -+.+++.+++++++.-.-.+..+|+|+++-.++-+|
T Consensus 145 KLGNlfL~~--~~~VKIgDFGLAt~le~~~Erk~-------TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL 212 (592)
T KOG0575|consen 145 KLGNLFLNE--NMNVKIGDFGLATQLEYDGERKK-------TLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLL 212 (592)
T ss_pred chhheeecC--cCcEEecccceeeeecCcccccc-------eecCCCcccChhHhccCCCCCchhhhhhhhHHHhhh
Confidence 999999986 779999999999999854 4421 245899999999998766778899999998776655
No 33
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.57 E-value=1e-14 Score=160.13 Aligned_cols=189 Identities=17% Similarity=0.207 Sum_probs=122.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|+. +|+.||||+.+..- .. -.+....+..|..
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~-------------------------------~~~~~~~~~~e~~ 53 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKAD--ML-------------------------------EKEQVAHIRAERD 53 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH--Hh-------------------------------hhhhHHHHHHHHH
Confidence 6899999999999998 58999999876410 00 0011123344544
Q ss_pred HHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
.+..+ ++++ +++.+. ......+|||||++|++|.++.... ..++...+...+ +-..+..+|..|++|+
T Consensus 54 ~l~~l-----~~~~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~~givHr 125 (360)
T cd05627 54 ILVEA-----DGAW--VVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQLGFIHR 125 (360)
T ss_pred HHHhC-----CCCC--EeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcc
Confidence 44433 2222 333333 2334579999999999998865322 223333222222 2234788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHH-----------------------------HHHHhhcCHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEA-----------------------------FYGIYEKDADKV 503 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l-----------------------------~~al~~~D~~~v 503 (760)
|+||+||+++. +|.++|+|||++..+.......+..- ......++..++
T Consensus 126 DLkp~NIli~~--~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 203 (360)
T cd05627 126 DIKPDNLLLDA--KGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYI 203 (360)
T ss_pred CCCHHHEEECC--CCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCcccc
Confidence 99999999985 89999999999886643321111000 000123667888
Q ss_pred HHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 504 LQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 504 ~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+++++.-...+...|+++++-.+.+++
T Consensus 204 APE~~~~~~~~~~~DiwSlGvilyel~ 230 (360)
T cd05627 204 APEVFMQTGYNKLCDWWSLGVIMYEML 230 (360)
T ss_pred CHHHHcCCCCCCcceeccccceeeecc
Confidence 999887666677889999987766654
No 34
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.57 E-value=1.8e-14 Score=155.80 Aligned_cols=185 Identities=22% Similarity=0.210 Sum_probs=119.1
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.||.|++|+||+|+. +|+.||||+.++..... ++.......|...
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~~~~~e~~~ 48 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQ---------------------------------DDDVECTMTEKRI 48 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh---------------------------------ccHHHHHHHHHHH
Confidence 589999999999998 58999999876521000 0000111223333
Q ss_pred HHHHHHhcCCCCce-eeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 378 AELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 378 l~~f~~~~~~~~~V-~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
+... .+++++ .+...+ ......++||||++|++|.+..... ..++...+.... +-..+..+|..|++|+|+
T Consensus 49 l~~~----~~h~~iv~~~~~~-~~~~~~~iv~Ey~~~g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dl 122 (320)
T cd05590 49 LSLA----RNHPFLTQLYCCF-QTPDRLFFVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEITSALMFLHDKGIIYRDL 122 (320)
T ss_pred HHhc----cCCCchhceeeEE-EcCCEEEEEEcCCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence 3222 123322 222222 3345679999999999998754322 223333332222 234478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
||.||+++. ++.++|+|||++......... .....+++.++++++......++..|++++...+.+++.
T Consensus 123 kp~NIli~~--~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 191 (320)
T cd05590 123 KLDNVLLDH--EGHCKLADFGMCKEGIFNGKT------TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLC 191 (320)
T ss_pred CHHHeEECC--CCcEEEeeCCCCeecCcCCCc------ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhh
Confidence 999999985 889999999998764322111 111246778889998877667778899999987776653
No 35
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.56 E-value=1.4e-14 Score=156.54 Aligned_cols=184 Identities=13% Similarity=0.099 Sum_probs=119.7
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.||.|++|.||+|+. +|+.||||+.++..... .+....+.+|...
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~~~~~e~~~ 48 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIA---------------------------------KDEVAHTLTESRV 48 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hHHHHHHHHHHHH
Confidence 589999999999998 58999999876521000 0001122345554
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCccccCCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHADPH 455 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHaDpH 455 (760)
+.++ +++++.-..-+.......+|||||++|++|.+..... ..+....+... .+-..++.+|..|++|+|+|
T Consensus 49 l~~l-----~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlk 122 (323)
T cd05571 49 LQNT-----RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLK 122 (323)
T ss_pred HHhC-----CCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCC
Confidence 5443 2233222222223445679999999999998765322 22333332222 22234788999999999999
Q ss_pred CCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 456 PGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 456 PGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|.||+++. ++.++|+|||++......... .....++..++++++......+...|+++++-.+.+++
T Consensus 123 p~NIll~~--~~~~kl~DfG~a~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell 189 (323)
T cd05571 123 LENLMLDK--DGHIKITDFGLCKEGISDGAT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 189 (323)
T ss_pred HHHEEECC--CCCEEEeeCCCCcccccCCCc------ccceecCccccChhhhcCCCCCccccCcccchhhhhhh
Confidence 99999985 789999999998754222111 01124677888888887666677899999988776654
No 36
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.56 E-value=1.7e-14 Score=159.86 Aligned_cols=190 Identities=15% Similarity=0.153 Sum_probs=120.9
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|+. +|+.||||+.+..-. . -.+....+.+|..
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~--~-------------------------------~~~~~~~~~~E~~ 53 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV--L-------------------------------NRNQVAHVKAERD 53 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh--h-------------------------------hhHHHHHHHHHHH
Confidence 5799999999999998 589999998754100 0 0011123445555
Q ss_pred HHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHa 452 (760)
.+.++ ++++ +++.+. ......++||||++|++|.++.... ...+...+... .+-..+..+|..|++|+
T Consensus 54 il~~l-----~h~~--iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHr 125 (381)
T cd05626 54 ILAEA-----DNEW--VVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM-EVFPEVLARFYIAELTLAIESVHKMGFIHR 125 (381)
T ss_pred HHHhc-----CCCC--eeeeEEEEecCCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 55443 2232 233332 3345679999999999998865321 12232222111 23345788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHH---------------------------------H--------H
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLL---------------------------------E--------A 491 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~---------------------------------~--------l 491 (760)
|+||.||+++. +++++|+|||++..+.......+. . .
T Consensus 126 DlKp~Nili~~--~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (381)
T cd05626 126 DIKPDNILIDL--DGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRC 203 (381)
T ss_pred CCcHHHEEECC--CCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccccccc
Confidence 99999999985 789999999997644211100000 0 0
Q ss_pred HHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 492 FYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 492 ~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
...-..+...+++++++.-...+...|+++++-.+.+++.
T Consensus 204 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~ellt 243 (381)
T cd05626 204 LAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLV 243 (381)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHh
Confidence 0011236778889998876666778999999988777654
No 37
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.56 E-value=2e-14 Score=157.49 Aligned_cols=190 Identities=17% Similarity=0.200 Sum_probs=123.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||+.+.. ++ . -.+....+.+|..
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~---------~-----------------~~~~~~~~~~E~~ 53 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKS-------EM---------L-----------------EKEQVAHVRAERD 53 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHH-------Hh---------h-----------------hhhHHHHHHHHHH
Confidence 6799999999999999 5899999987541 00 0 0011122344555
Q ss_pred HHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
.+..+. +++ +++.+. ......+|||||++|++|.++.... ..+....+...+ +-..+..+|..|++|+
T Consensus 54 il~~l~-----h~~--iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~ 125 (364)
T cd05599 54 ILAEAD-----NPW--VVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIHKLGYIHR 125 (364)
T ss_pred HHHhCC-----CCC--CcceEEEEEcCCeEEEEECCCCCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 555442 232 233332 3345679999999999998865322 223333332222 2234788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHH--------------------------------HHHHhhcCH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEA--------------------------------FYGIYEKDA 500 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l--------------------------------~~al~~~D~ 500 (760)
|+||+||+++. +|.++|+|||++..+........... ......+++
T Consensus 126 Dlkp~NIl~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 203 (364)
T cd05599 126 DIKPDNLLLDA--KGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTP 203 (364)
T ss_pred cCCHHHeEECC--CCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCc
Confidence 99999999985 88999999999876643221110000 000123667
Q ss_pred HHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 501 DKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 501 ~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
.++++++..-+..+...|+++++-.+.+++.
T Consensus 204 ~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 204 DYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred cccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 8888988876667788999999987776654
No 38
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.56 E-value=3.8e-14 Score=146.19 Aligned_cols=186 Identities=19% Similarity=0.159 Sum_probs=120.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|++ +|+.||+|+.+..... +....+.+|.+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~-----------------------------------~~~~~~~~e~~ 45 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPP-----------------------------------DLKAKFLQEAR 45 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCH-----------------------------------HHHHHHHHHHH
Confidence 3689999999999998 6999999986543211 11222344555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+.++ +++++.-+.-+.......++||||++|++|.++........+...+.... +-..+..+|..|++|+|+
T Consensus 46 ~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl 120 (252)
T cd05084 46 ILKQY-----SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDL 120 (252)
T ss_pred HHHhC-----CCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence 44443 22332211112233456799999999999998764333234443333322 223367889999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|+||++++ ++.++|+|||++..+.+..... ..+.......+++++....+..+...|++++.-.+.+++
T Consensus 121 ~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~ 190 (252)
T cd05084 121 AARNCLVTE--KNVLKISDFGMSREEEDGVYAS----TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAF 190 (252)
T ss_pred chheEEEcC--CCcEEECccccCcccccccccc----cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHH
Confidence 999999985 7899999999988765321100 001111234567788777777777889999987776655
No 39
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.56 E-value=3.3e-14 Score=151.14 Aligned_cols=181 Identities=18% Similarity=0.164 Sum_probs=120.7
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||+....-... ......+.+|..
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~~~~~E~~ 53 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIR---------------------------------LKQEQHVHNEKR 53 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh---------------------------------hHHHHHHHHHHH
Confidence 6799999999999998 59999999875410000 000112334544
Q ss_pred HHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
.+.++. +++ |.+++. ......+++|||++|++|.++..... .+......... +-..+..+|..|++|+
T Consensus 54 ~l~~l~-----hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~ 125 (291)
T cd05612 54 VLKEVS-----HPF--IIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLHSKEIVYR 125 (291)
T ss_pred HHHhCC-----CCc--HhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 444431 222 222332 22345689999999999988654221 23333222221 2234788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
|++|.||+++. +|.++|+|||++..+..... ...++..++++++......+...|+++++-.+.+++.
T Consensus 126 dlkp~NIli~~--~~~~kl~Dfg~~~~~~~~~~---------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~ 193 (291)
T cd05612 126 DLKPENILLDK--EGHIKLTDFGFAKKLRDRTW---------TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLV 193 (291)
T ss_pred CCCHHHeEECC--CCCEEEEecCcchhccCCcc---------cccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHh
Confidence 99999999985 88999999999887754321 1235777888888776666778899999988776653
No 40
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.56 E-value=5.5e-14 Score=148.86 Aligned_cols=186 Identities=15% Similarity=0.108 Sum_probs=124.0
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|.. +|+.||||+........ ......+.+|..
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~~~~~~~E~~ 52 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK---------------------------------RKGEAMALNEKR 52 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhh---------------------------------hhhHHHHHHHHH
Confidence 5799999999999998 69999999865521110 001112345555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~-~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
.+.++. +..-+.+...+ ......+++|||++|++|.+..... ..+.+...+.... +-..+..+|..|++|+|
T Consensus 53 il~~l~----~~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~d 127 (285)
T cd05631 53 ILEKVN----SRFVVSLAYAY-ETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRD 127 (285)
T ss_pred HHHhcC----CCcEEEEEEEE-ccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCC
Confidence 555542 22223333333 3345679999999999998754321 1233433333222 23347889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
++|.||+++. ++.++|+|||++..++..... .-..+...++++++...+..+...|+++++-.+.+++.
T Consensus 128 ikp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~-------~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~ 196 (285)
T cd05631 128 LKPENILLDD--RGHIRISDLGLAVQIPEGETV-------RGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQ 196 (285)
T ss_pred CCHHHEEECC--CCCEEEeeCCCcEEcCCCCee-------cCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHh
Confidence 9999999985 789999999999876543211 01235667888888877777788999999987766653
No 41
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.55 E-value=6.2e-14 Score=148.10 Aligned_cols=185 Identities=15% Similarity=0.123 Sum_probs=120.9
Q ss_pred cccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 301 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 301 IasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
||.|++|.||++.. +|+.||||+........ ......+..|.+.+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~~~~~~~E~~il 47 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKK---------------------------------RKGYEGAMVEKRIL 47 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhh---------------------------------hHHHHHHHHHHHHH
Confidence 68999999999998 68999999865421000 00011234455555
Q ss_pred HHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhh---hhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL---DELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l---~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
..+ +++++....-+.......++||||++|++|.+.... ....++...+.... +-..+..+|..|++|+|
T Consensus 48 ~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d 122 (280)
T cd05608 48 AKV-----HSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRD 122 (280)
T ss_pred HhC-----CCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 544 223322222122334567999999999999875421 11223333332222 23347889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
++|.||++++ ++.++|+|||++..+....... ....++..+++++....+..+...|++++.-.+.+++.
T Consensus 123 lkp~Nili~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~ 192 (280)
T cd05608 123 LKPENVLLDN--DGNVRISDLGLAVELKDGQSKT------KGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIA 192 (280)
T ss_pred CCHHHEEECC--CCCEEEeeCccceecCCCCccc------cccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHh
Confidence 9999999985 7899999999998765432210 01235667888888877777778999999987776654
No 42
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.55 E-value=2.9e-14 Score=153.90 Aligned_cols=184 Identities=21% Similarity=0.173 Sum_probs=118.8
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.||.|++|+||+|+. +|+.||||+.+...... ++.......|.+.
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~~~~~e~~i 48 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ---------------------------------DDDVDCTMTEKRI 48 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh---------------------------------hhHHHHHHHHHHH
Confidence 589999999999998 48899999876521100 0000112233333
Q ss_pred HHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 378 AELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
+... .++++| ++++. ......+|||||++|++|.+..... ...+........ +-..+..+|..|++|+|
T Consensus 49 l~~~----~~hp~i--~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD 121 (321)
T cd05591 49 LALA----AKHPFL--TALHCCFQTKDRLFFVMEYVNGGDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRHGVIYRD 121 (321)
T ss_pred HHhc----cCCCCc--cceeeEEEcCCeEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 3222 233333 33332 3345679999999999997754322 223333322222 23347889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
++|.||+++. ++.++|+|||++......... .....+...++++++......++..|++++...+.+++.
T Consensus 122 ikp~Nill~~--~~~~kL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t 191 (321)
T cd05591 122 LKLDNILLDA--EGHCKLADFGMCKEGILNGVT------TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMA 191 (321)
T ss_pred CCHHHeEECC--CCCEEEeecccceecccCCcc------ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhc
Confidence 9999999985 889999999998764322111 011235677888888876667788999999987776653
No 43
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.55 E-value=5.3e-14 Score=151.97 Aligned_cols=187 Identities=17% Similarity=0.094 Sum_probs=121.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||+.+...... +.-......|..
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~~~~~e~~ 52 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ---------------------------------DDDVECTMVEKR 52 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhHHHHHHHHHH
Confidence 5799999999999998 57899999876531100 000011122333
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+... .+++.+....-+.......++||||++|++|.+..... ..++...+...+ +-..+..+|..|++|+|+
T Consensus 53 ~l~~~----~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDl 127 (323)
T cd05616 53 VLALS----GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDL 127 (323)
T ss_pred HHHhc----cCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCC
Confidence 33222 23333322222223345679999999999998764321 223333332222 223477899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
||+||+++. ++.++|+|||++......... .....+++.++++++...+..+...|+++++-.+.+++.
T Consensus 128 kp~Nill~~--~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt 196 (323)
T cd05616 128 KLDNVMLDS--EGHIKIADFGMCKENMWDGVT------TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 196 (323)
T ss_pred CHHHeEECC--CCcEEEccCCCceecCCCCCc------cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHh
Confidence 999999986 889999999998754322111 111246788899999888877888999999988776654
No 44
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.55 E-value=4.3e-14 Score=152.76 Aligned_cols=185 Identities=17% Similarity=0.101 Sum_probs=119.7
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||+.++..... ++-...+..|.+
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~~~~~~~e~~ 52 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ---------------------------------DDDVECTMVEKR 52 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhHHHHHHHHHH
Confidence 5799999999999998 47899999976521100 000112233444
Q ss_pred HHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
.+..+ .+.+. ++..+. ......++||||++|++|.+..... ..+......... +-..+..+|..|++|+
T Consensus 53 ~l~~~----~~~~~--i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~ 125 (324)
T cd05587 53 VLALP----GKPPF--LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV-GKFKEPHAVFYAAEIAIGLFFLHSKGIIYR 125 (324)
T ss_pred HHHhc----CCCCc--eeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 44433 22222 233322 3345679999999999998765321 122333222222 2234788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
|+||.|||++. ++.++|+|||++......... .....++..++++++...+..+...|+++++-.+.+++.
T Consensus 126 dlkp~Nill~~--~~~~kL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt 196 (324)
T cd05587 126 DLKLDNVMLDA--EGHIKIADFGMCKENIFGGKT------TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 196 (324)
T ss_pred CCCHHHeEEcC--CCCEEEeecCcceecCCCCCc------eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHh
Confidence 99999999985 789999999998653211110 011235677888888877767778899999988776653
No 45
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.55 E-value=2.6e-14 Score=154.61 Aligned_cols=185 Identities=15% Similarity=0.105 Sum_probs=119.6
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.||.|++|.||+|+. +|+.||+|+.+...... .+....+.+|.+.
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---------------------------------~~~~~~~~~E~~~ 48 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIA---------------------------------KDEVAHTVTESRV 48 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hHHHHHHHHHHHH
Confidence 589999999999998 58999999976521100 0001122345544
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPH 455 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDpH 455 (760)
+..+ .+..-+.+...+ ......+|||||++|++|.+..... ..++...+.... +-..+..+|..|++|+|+|
T Consensus 49 l~~l----~hp~i~~~~~~~-~~~~~~~lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlk 122 (323)
T cd05595 49 LQNT----RHPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRDVVYRDIK 122 (323)
T ss_pred HHhC----CCCCCcceeeEE-ecCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCC
Confidence 4444 222112222222 3345679999999999997754322 123333332222 2334788999999999999
Q ss_pred CCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 456 PGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 456 PGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
|.||+++. ++.++|+|||++......... .....+++.+++++...-+......|+++++-.+.+++.
T Consensus 123 p~NIll~~--~~~~kL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~ 190 (323)
T cd05595 123 LENLMLDK--DGHIKITDFGLCKEGISDGAT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 190 (323)
T ss_pred HHHEEEcC--CCCEEecccHHhccccCCCCc------cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHh
Confidence 99999985 889999999988753221110 011235677888888776667788899999987776653
No 46
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.55 E-value=2e-14 Score=158.51 Aligned_cols=192 Identities=18% Similarity=0.182 Sum_probs=120.1
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
++||.|++|.||+|+. +|+.||||+.+.. +. . ..+....+.+|..
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~-------~~---------~-----------------~~~~~~~~~~E~~ 53 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKA-------DV---------L-----------------MRNQAAHVKAERD 53 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHH-------HH---------H-----------------hhhhHHHHHHHHH
Confidence 6899999999999998 5899999986541 00 0 0011122345555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHaDp 454 (760)
.+.++ +++++.-...........++||||++|++|.++.... ..+....+... .+-..+..+|..|++|+|+
T Consensus 54 il~~l-----~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDl 127 (376)
T cd05598 54 ILAEA-----DNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKMGFIHRDI 127 (376)
T ss_pred HHHhC-----CCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence 55544 2232221112223345679999999999999875322 12222222111 1224478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhh----------------------------------HHHHHH---HHHHHhh
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNI----------------------------------REGLLE---AFYGIYE 497 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~----------------------------------r~~l~~---l~~al~~ 497 (760)
||+||+++. ++.++|+|||++..+.... +..... .......
T Consensus 128 kp~Nill~~--~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (376)
T cd05598 128 KPDNILIDR--DGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLV 205 (376)
T ss_pred CHHHEEECC--CCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccC
Confidence 999999985 8899999999975332000 000000 0001124
Q ss_pred cCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 498 KDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 498 ~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+.+.++++++..-...+...|+++++-.+.+++.
T Consensus 206 gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~ 239 (376)
T cd05598 206 GTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV 239 (376)
T ss_pred CCccccCHHHHcCCCCCcceeeeeccceeeehhh
Confidence 6677888888876666778899999877766543
No 47
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.55 E-value=7.6e-14 Score=140.16 Aligned_cols=141 Identities=19% Similarity=0.207 Sum_probs=102.9
Q ss_pred cccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHHHH
Q 004334 301 IAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANAEL 380 (760)
Q Consensus 301 IasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl~~ 380 (760)
||.|++|.||+|.++|.+|+||+..+.....-..| . ..-...+.+|.+++..
T Consensus 2 ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~--------------------------~--~~~~~~~~~E~~~l~~ 53 (199)
T TIGR03724 2 IAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELD--------------------------E--RIRRERTRNEARLLSR 53 (199)
T ss_pred CCCCceEEEEEeecCCccEEEEEecCCcCcCchHH--------------------------H--HHHHHHHHHHHHHHHH
Confidence 78999999999999999999998665321110000 0 0011235678888887
Q ss_pred HHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 004334 381 FASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIA 460 (760)
Q Consensus 381 f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDpHPGNIL 460 (760)
+.. +++.+|.++.......+++|||++|.++.++..... ..++..++ ..+..+|..|++|+|+||+||+
T Consensus 54 l~~-----~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~-----~~~~~~i~-~~l~~lH~~gi~H~Dl~~~Nil 122 (199)
T TIGR03724 54 ARK-----AGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGN-----DELLREIG-RLVGKLHKAGIVHGDLTTSNII 122 (199)
T ss_pred HHH-----CCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcH-----HHHHHHHH-HHHHHHHHCCeecCCCCcceEE
Confidence 754 347788888777777899999999999988643211 13444433 4578899999999999999999
Q ss_pred EeccCCCcEEEEeecceeccChh
Q 004334 461 VDDVNGGRLIFYDFGMMGSISPN 483 (760)
Q Consensus 461 V~~~~~g~l~LiDFG~v~~l~~~ 483 (760)
++ +++++++|||+++...+.
T Consensus 123 ~~---~~~~~liDfg~a~~~~~~ 142 (199)
T TIGR03724 123 VR---DDKLYLIDFGLGKYSDEI 142 (199)
T ss_pred EE---CCcEEEEECCCCcCCCcH
Confidence 97 688999999998876543
No 48
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.54 E-value=4.8e-14 Score=152.15 Aligned_cols=184 Identities=18% Similarity=0.172 Sum_probs=118.1
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.||.|++|.||+|+. +|+.||||+.+...... . ++. .....|...
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~-------------------------------~~~-~~~~~e~~~ 48 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE-D-------------------------------DDV-ECTMVERRV 48 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-h-------------------------------hhH-HHHHHHHHH
Confidence 589999999999998 58899999977532100 0 000 011122221
Q ss_pred HHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 378 AELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
+.. ..++++ +++.+. ......++||||++|++|.+..... ..++...+.... +-..+..+|..|++|+|
T Consensus 49 l~~----~~~hp~--i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivH~d 121 (316)
T cd05592 49 LAL----AWEHPF--LTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSS-GRFDEARARFYAAEIICGLQFLHKKGIIYRD 121 (316)
T ss_pred HHh----ccCCCC--ccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCC
Confidence 111 112333 233332 2345679999999999998765322 223333333222 22347889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+||.||+++. ++.++|+|||++......... .....++..++++++......+...|++++.-.+.+++.
T Consensus 122 lkp~Nill~~--~~~~kL~Dfg~a~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~ 191 (316)
T cd05592 122 LKLDNVLLDK--DGHIKIADFGMCKENMNGEGK------ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLI 191 (316)
T ss_pred CCHHHeEECC--CCCEEEccCcCCeECCCCCCc------cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHh
Confidence 9999999985 789999999998765332211 011235777888888876666778999999987776653
No 49
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.54 E-value=8.1e-14 Score=143.41 Aligned_cols=185 Identities=18% Similarity=0.187 Sum_probs=121.7
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
++||.|++|.||+|.+ +++.||+|+.++..... ....+.+|+..
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~-----------------------------------~~~~~~~e~~~ 45 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQE-----------------------------------LKIKFLSEARI 45 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHH-----------------------------------HHHHHHHHHHH
Confidence 3689999999999998 68899999876643211 11123455555
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPH 455 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI~~~GffHaDpH 455 (760)
+.++ +++++.-+.-+.......+++|||++|++|.++........+...+.....+ ..+..+|..|++|+|++
T Consensus 46 l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~ 120 (250)
T cd05085 46 LKQY-----DHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLA 120 (250)
T ss_pred HHhC-----CCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccC
Confidence 5544 2333222222223345679999999999998876433333444444433322 34678899999999999
Q ss_pred CCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 456 PGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 456 PGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|+||++++ ++.++|+|||++.......... .........++++++...+..+...|++++...+.+++
T Consensus 121 p~nili~~--~~~~~l~d~g~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~ 188 (250)
T cd05085 121 ARNCLVGE--NNVLKISDFGMSRQEDDGIYSS-----SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETF 188 (250)
T ss_pred hheEEEcC--CCeEEECCCccceecccccccc-----CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHh
Confidence 99999985 7899999999987654321100 00011123467777777777777889999987766554
No 50
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.54 E-value=7.4e-14 Score=148.90 Aligned_cols=185 Identities=19% Similarity=0.214 Sum_probs=120.1
Q ss_pred cccccccccEEEEEEE------------------CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccch
Q 004334 299 EPIAAASLGQVHRARL------------------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDW 360 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l------------------~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l 360 (760)
+.||+|++|.||+|++ ++..||||+.++.....
T Consensus 11 ~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~----------------------------- 61 (304)
T cd05096 11 EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKN----------------------------- 61 (304)
T ss_pred eEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHH-----------------------------
Confidence 5799999999999975 23479999988753221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhc---------------
Q 004334 361 VAIYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL--------------- 425 (760)
Q Consensus 361 ~~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~--------------- 425 (760)
....+.+|.+.+.++ .+..-+.+...+ ......+|+|||++|++|.++......
T Consensus 62 ------~~~~~~~E~~~l~~l----~h~niv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 130 (304)
T cd05096 62 ------ARNDFLKEVKILSRL----KDPNIIRLLGVC-VDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAH 130 (304)
T ss_pred ------HHHHHHHHHHHHhhc----CCCCeeEEEEEE-ecCCceEEEEecCCCCcHHHHHHhcccccccccccccccccc
Confidence 111234555555554 222222222222 334567999999999999886532210
Q ss_pred ---CCCHH---HHHHHHHHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcC
Q 004334 426 ---GVDRK---RLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKD 499 (760)
Q Consensus 426 ---g~d~~---~la~~lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D 499 (760)
.+... .++..+ ...+..+|..|++|+|+||.||+++. ++.++|+|||++..+........ .+-....
T Consensus 131 ~~~~~~~~~~~~i~~~i-~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kl~DfG~~~~~~~~~~~~~----~~~~~~~ 203 (304)
T cd05096 131 CLPAISYSSLLHVALQI-ASGMKYLSSLNFVHRDLATRNCLVGE--NLTIKIADFGMSRNLYAGDYYRI----QGRAVLP 203 (304)
T ss_pred ccccccHHHHHHHHHHH-HHHHHHHHHCCccccCcchhheEEcC--CccEEECCCccceecccCceeEe----cCcCCCC
Confidence 01111 222222 23478899999999999999999986 78999999999987644321100 0111123
Q ss_pred HHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 500 ADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 500 ~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
..++++++...+..++..|++++.-.+.+++
T Consensus 204 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 234 (304)
T cd05096 204 IRWMAWECILMGKFTTASDVWAFGVTLWEIL 234 (304)
T ss_pred ccccCHHHHhcCCCCchhhhHHHHHHHHHHH
Confidence 4577888877777788899999998777665
No 51
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.54 E-value=4.7e-14 Score=153.22 Aligned_cols=188 Identities=15% Similarity=0.138 Sum_probs=120.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||+....- . . .......+.+|..
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~-~------------------------------~~~~~~~~~~e~~ 53 (331)
T cd05624 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWE--M-L------------------------------KRAETACFREERN 53 (331)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH--H-H------------------------------hhHHHHHHHHHHH
Confidence 5799999999999998 58899999864310 0 0 0000111233333
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHaDp 454 (760)
.+..+ +++.+....-+.+.....+|||||++|++|.++.......+........ .+-..++.+|..|++|+|+
T Consensus 54 ~l~~~-----~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDl 128 (331)
T cd05624 54 VLVNG-----DCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDI 128 (331)
T ss_pred HHHhC-----CCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence 33222 2233322222223445679999999999999876432223333322221 1234478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCCCCCChHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-----G~~~~~~D~~al~~~~~~~ 529 (760)
||.||+++. ++.++|+|||++..+....... .....+...++++++... +......|++++...+.++
T Consensus 129 kp~Nill~~--~~~~kl~DfG~a~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~el 201 (331)
T cd05624 129 KPDNVLLDM--NGHIRLADFGSCLKMNQDGTVQ-----SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM 201 (331)
T ss_pred chHHEEEcC--CCCEEEEeccceeeccCCCcee-----eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhh
Confidence 999999985 7899999999998775432210 012236677888887754 4456778999998877766
Q ss_pred HH
Q 004334 530 LN 531 (760)
Q Consensus 530 l~ 531 (760)
+.
T Consensus 202 l~ 203 (331)
T cd05624 202 LY 203 (331)
T ss_pred hh
Confidence 53
No 52
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.54 E-value=4.1e-14 Score=152.94 Aligned_cols=185 Identities=19% Similarity=0.166 Sum_probs=117.5
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.||.|++|+||+|+. +|+.||||+.+...... .+....+..|...
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~~~~~e~~~ 48 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLN---------------------------------RKEQKHIMAERNV 48 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhHHHHHHHHHHH
Confidence 589999999999998 69999999876521100 0000111122111
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCccccCCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHADPH 455 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHaDpH 455 (760)
+.+.+.+..-+.+...+ +.....+++|||++|+.|.+.... ...+....+... .+-..+..+|..|++|+|+|
T Consensus 49 ---~l~~~~hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlk 123 (325)
T cd05604 49 ---LLKNVKHPFLVGLHYSF-QTTEKLYFVLDFVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSINIVYRDLK 123 (325)
T ss_pred ---HHHhCCCCCCccEEEEE-ecCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence 11222222222222222 334567999999999999765432 122333332222 12334788999999999999
Q ss_pred CCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 456 PGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 456 PGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|+||+++. ++.++|+|||++......... .....++..++++++...+..+...|++++.-.+.+++
T Consensus 124 p~NIll~~--~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~ 190 (325)
T cd05604 124 PENILLDS--QGHVVLTDFGLCKEGIAQSDT------TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEML 190 (325)
T ss_pred HHHeEECC--CCCEEEeecCCcccCCCCCCC------cccccCChhhCCHHHHcCCCCCCcCccccccceehhhh
Confidence 99999986 889999999998753221111 01124677888999887777778899999988776665
No 53
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.54 E-value=1.1e-13 Score=145.22 Aligned_cols=184 Identities=17% Similarity=0.214 Sum_probs=111.7
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.+|.||+|.||+++. +|+-||||.-.-.-.+. .+.+...+|.+.
T Consensus 9 kvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~----------------------------------~VkKIAlREIrm 54 (396)
T KOG0593|consen 9 KVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDP----------------------------------VVKKIALREIRM 54 (396)
T ss_pred ccccCcceEEEEeccCCcccEEEEEeeccCCccH----------------------------------HHHHHHHHHHHH
Confidence 589999999999999 59999999643211100 011111223333
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHH--HHHHHHhCCccccCCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQILSHGFFHADPH 455 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~--~L~qI~~~GffHaDpH 455 (760)
++++ ++.+.|..-+|+. -..+..||.|||+-.-|.++.. ...|.+...+-..+.+. .++..|.++++|||+|
T Consensus 55 LKqL----kH~NLVnLiEVFr-rkrklhLVFE~~dhTvL~eLe~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIK 128 (396)
T KOG0593|consen 55 LKQL----KHENLVNLIEVFR-RKRKLHLVFEYCDHTVLHELER-YPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIK 128 (396)
T ss_pred HHhc----ccchHHHHHHHHH-hcceeEEEeeecchHHHHHHHh-ccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCC
Confidence 3222 1112222222221 1245689999999888877654 34566665554443332 2556789999999999
Q ss_pred CCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 456 PGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 456 PGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|.||||+. .|.++|+|||.++.++. --+.|.+.+..=..+.++ .+..-.-..+.+|+|+++=.+.+++
T Consensus 129 PENILit~--~gvvKLCDFGFAR~L~~-pgd~YTDYVATRWYRaPE----LLvGDtqYG~pVDiWAiGCv~aEl~ 196 (396)
T KOG0593|consen 129 PENILITQ--NGVVKLCDFGFARTLSA-PGDNYTDYVATRWYRAPE----LLVGDTQYGKPVDIWAIGCVFAELL 196 (396)
T ss_pred hhheEEec--CCcEEeccchhhHhhcC-CcchhhhhhhhhhccChh----hhcccCcCCCcccchhhhHHHHHHh
Confidence 99999996 89999999999999983 223455443322222232 2222123456789999886554443
No 54
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.54 E-value=5.4e-14 Score=151.17 Aligned_cols=184 Identities=14% Similarity=0.121 Sum_probs=119.3
Q ss_pred cccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 301 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 301 IasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
||.|++|.||+|+. +|+.||||+.+...... ......+..|...+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~---------------------------------~~~~~~~~~E~~~l 47 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVS---------------------------------RSEVTHTLAERTVL 47 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhHHHHHHHHHHHH
Confidence 68999999999998 58999999875410000 00011233455555
Q ss_pred HHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCCCC
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHP 456 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDpHP 456 (760)
.++ +++++.-...+.......++||||++|++|.+..... ..++.......+ +-..+..+|..|++|+|+||
T Consensus 48 ~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp 121 (312)
T cd05585 48 AQV-----NCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQRE-GRFDLSRARFYTAELLCALENLHKFNVIYRDLKP 121 (312)
T ss_pred HhC-----CCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCH
Confidence 544 2333221111223345679999999999998765322 223333322222 22347889999999999999
Q ss_pred CcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 457 GNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 457 GNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
.||+++. ++.++|+|||++......... .....+...++++++......+...|++++...+.+++.
T Consensus 122 ~Nili~~--~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~t 188 (312)
T cd05585 122 ENILLDY--QGHIALCDFGLCKLNMKDDDK------TNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLT 188 (312)
T ss_pred HHeEECC--CCcEEEEECcccccCccCCCc------cccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHh
Confidence 9999985 789999999998754332211 011235677888888776666778899999987776654
No 55
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.54 E-value=4.2e-14 Score=152.80 Aligned_cols=187 Identities=16% Similarity=0.071 Sum_probs=120.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|.. +|+.||||+.++..... ......+..|.+
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~~l~~e~~ 51 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA---------------------------------RDEVESLMCEKR 51 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhHHHHHHHHHH
Confidence 4799999999999998 58999999976521000 001112333433
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.++.+. .+.+..-+.+...+ ......++||||++|++|...... ..++.......+ +-..+..+|..|++|+|+
T Consensus 52 ~~~~~~-~l~hp~i~~~~~~~-~~~~~~~lv~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdl 127 (324)
T cd05589 52 IFETAN-SERHPFLVNLFACF-QTEDHVCFVMEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHENKIVYRDL 127 (324)
T ss_pred HHHhcc-ccCCCChhceeeEE-EcCCEEEEEEcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCC
Confidence 333322 12222222222222 345667999999999998775432 233433333222 223478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|.||+++. ++.++|+|||++......... .....+...++++++...+..+...|+++++-.+.+++
T Consensus 128 kp~Nill~~--~~~~kL~Dfg~~~~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 195 (324)
T cd05589 128 KLDNLLLDT--EGFVKIADFGLCKEGMGFGDR------TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEML 195 (324)
T ss_pred CHHHeEECC--CCcEEeCcccCCccCCCCCCc------ccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHH
Confidence 999999986 889999999988754322111 01123567788888887666677889999998776665
No 56
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.54 E-value=2.9e-14 Score=154.09 Aligned_cols=184 Identities=13% Similarity=0.101 Sum_probs=118.7
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.||.|++|+||+|+. +|+.||||+.++..... ......+..|.+.
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~---------------------------------~~~~~~~~~e~~~ 48 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA---------------------------------KDEVAHTLTENRV 48 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhHHHHHHHHHHH
Confidence 589999999999998 68999999976521100 0000112334444
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh-CCccccCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS-HGFFHADP 454 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~-~GffHaDp 454 (760)
+..+ +++++.-...+.......+|||||++|++|.+..... ..++...+.... +-..+..+|. .|++|+|+
T Consensus 49 l~~~-----~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDi 122 (325)
T cd05594 49 LQNS-----RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDL 122 (325)
T ss_pred HHhC-----CCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCC
Confidence 4433 2333322222223445679999999999998754322 223333332222 2334788996 79999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
||.||+++. ++.++|+|||++......... .....++..++++++...+......|+++++..+.+++
T Consensus 123 kp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 190 (325)
T cd05594 123 KLENLMLDK--DGHIKITDFGLCKEGIKDGAT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 190 (325)
T ss_pred CCCeEEECC--CCCEEEecCCCCeecCCCCcc------cccccCCcccCCHHHHccCCCCCccccccccceeeeec
Confidence 999999985 889999999998754322111 01123677888899887777778899999987665554
No 57
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.53 E-value=3.8e-14 Score=153.18 Aligned_cols=184 Identities=16% Similarity=0.130 Sum_probs=116.4
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.||.|++|.||+|+. +|+.||+|+........ ......+..|...
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~~~~~e~~~ 48 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILK---------------------------------KKEEKHIMSERNV 48 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHh---------------------------------hhHHHHHHHHHHH
Confidence 589999999999998 57899999875410000 0000011112111
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHH---HHHHHHHHHHHHHhCCccccCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRL---GRYAVESYLEQILSHGFFHADP 454 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~l---a~~lv~~~L~qI~~~GffHaDp 454 (760)
+.+.+.+ +++.-...+.......+++|||++|++|.++.... .......+ +..++ ..+..+|..|++|+|+
T Consensus 49 ---~l~~~~h-~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~-~~L~~lH~~giiHrDl 122 (325)
T cd05602 49 ---LLKNVKH-PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE-RCFLEPRARFYAAEIA-SALGYLHSLNIVYRDL 122 (325)
T ss_pred ---HHHhCCC-CCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHH-HHHHHHHHCCeEecCC
Confidence 1122222 32221112223345679999999999998765322 12222222 22222 3478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
||+||+++. ++.++|+|||++......... .....+++.++++++..........|++++.-.+.+++
T Consensus 123 kp~Nili~~--~~~~kl~DfG~a~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 190 (325)
T cd05602 123 KPENILLDS--QGHIVLTDFGLCKENIEHNGT------TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 190 (325)
T ss_pred CHHHeEECC--CCCEEEccCCCCcccccCCCC------cccccCCccccCHHHHcCCCCCCccccccccHHHHHHh
Confidence 999999985 889999999998764322110 11123677888999887777777899999988776665
No 58
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.53 E-value=4.6e-14 Score=152.74 Aligned_cols=185 Identities=16% Similarity=0.119 Sum_probs=119.9
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..||.|++|+||+|.. +|+.||||+.+...... ++-...+..|..
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---------------------------------~~~~~~~~~e~~ 52 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ---------------------------------DDDVECTMVEKR 52 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhHHHHHHHHHH
Confidence 5799999999999998 58999999876421000 000111233433
Q ss_pred HHHHHHHhcCCCCceeeceee--eccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIF--WEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy--~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
.+..+ .+++.+ +..+ .......+|||||++|++|.+..... ..++...+.... +-..+..+|..|++|+
T Consensus 53 ~l~~~----~~~~~i--~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~ivHr 125 (323)
T cd05615 53 VLALQ----DKPPFL--TQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLHRRGIIYR 125 (323)
T ss_pred HHHhc----cCCCch--hheeeEEecCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 33322 223322 2222 23345679999999999998765321 123333332222 2234788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
|+||+||+++. ++.++|+|||++......... .....++..++++++...+..+...|++++.-.+.+++.
T Consensus 126 Dikp~Nill~~--~~~ikL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt 196 (323)
T cd05615 126 DLKLDNVMLDS--EGHIKIADFGMCKEHMVDGVT------TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA 196 (323)
T ss_pred CCCHHHeEECC--CCCEEEeccccccccCCCCcc------ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHh
Confidence 99999999985 789999999998764322110 011235677888988877777788999999987776653
No 59
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.53 E-value=1.5e-13 Score=138.78 Aligned_cols=176 Identities=25% Similarity=0.344 Sum_probs=113.5
Q ss_pred EEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCC--ccccchHHHHHHHHHHHHHHHHHHHHHHHhc
Q 004334 309 VHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSD--GAKRDWVAIYDECASVLYQEAANAELFASNF 385 (760)
Q Consensus 309 VhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~--~~~~~l~~i~~E~~~~l~~EA~nl~~f~~~~ 385 (760)
||.|.. +|++||||+-+.+...- .. ........ +... .....|..+. .....+|+++|.++.+
T Consensus 2 Vy~~~~~~~~~~a~K~~r~~~~~F-k~-------~~~y~~~~-~r~~~~~~~~~~~~~~---~~~~~~E~~~L~~l~~-- 67 (188)
T PF01163_consen 2 VYHAIDPDGEEVAVKIYRTGRTSF-KR-------RKKYRDYD-YRFKKYRHKSSWRYLI---REWAKKEFRNLKRLYE-- 67 (188)
T ss_dssp EEEEEECTTEEEEEEEE-S---SS--H-------HHHHTTTS-TTSTTC--G--CHHHH---HHHHHHHHHHHHHCCC--
T ss_pred EEEEECCCCCEEEEEEeccCceEE-EE-------eeeeeccc-chhcccccccCHHHHH---HHHHHHHHHHHHHHHH--
Confidence 899998 79999999998874322 21 12222211 1100 0122333333 3345789999998843
Q ss_pred CCCCceeeceeeeccCCCeEEEEeecC--CCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEEec
Q 004334 386 KDMDYVKVPTIFWEYTTPQILTMEYVP--GIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDD 463 (760)
Q Consensus 386 ~~~~~V~VP~vy~e~st~~vLVME~ie--G~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDpHPGNILV~~ 463 (760)
.++.+|++| ..++.+||||||+ |.++..+........+...+...+++....++|..|++||||++.||++.+
T Consensus 68 ---~Gv~vP~p~--~~~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~ 142 (188)
T PF01163_consen 68 ---AGVPVPKPY--DYNRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDD 142 (188)
T ss_dssp ---TT-SS--EE--EEETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEET
T ss_pred ---CCccCCcEE--EEeCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeec
Confidence 458899998 3468899999999 998887765443345677888888888888889999999999999999984
Q ss_pred cCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC
Q 004334 464 VNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL 513 (760)
Q Consensus 464 ~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~ 513 (760)
+++.+||||.+...+...-.. ++.+|.+.+...+...|..
T Consensus 143 ---~~~~iIDf~qav~~~~p~a~~-------~l~RDi~ni~~fF~~~~~~ 182 (188)
T PF01163_consen 143 ---GKVYIIDFGQAVDSSHPNAEE-------LLRRDIENIIRFFKKKGVQ 182 (188)
T ss_dssp ---TCEEE--GTTEEETTSTTHHH-------HHHHHHHHHHHHHHCCC--
T ss_pred ---ceEEEEecCcceecCCccHHH-------HHHHHHHHHHHHHHHhCCC
Confidence 599999999998887543322 3457888888888877753
No 60
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.53 E-value=6.3e-14 Score=151.22 Aligned_cols=184 Identities=19% Similarity=0.172 Sum_probs=119.0
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.||.|++|.||+|+. +|+.||||+.++..... ++.......|.+.
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~~~~~~~e~~~ 48 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI---------------------------------DDDVECTMVEKRV 48 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------cchHHHHHHHHHH
Confidence 589999999999999 58999999877631100 0000112233333
Q ss_pred HHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 378 AELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
+... . +++. +++.+. ......++||||++|++|.+..... ...+........ +-..+..+|..|++|+|
T Consensus 49 l~~~---~-~~~~--i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrD 121 (316)
T cd05620 49 LALA---W-ENPF--LTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKGIIYRD 121 (316)
T ss_pred HHhc---c-CCCC--ccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 3221 1 2222 333332 3345679999999999998764322 223333332222 22347889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+||+||+++. ++.++|+|||++......... .....++..++++++...+..++..|++++...+.+++.
T Consensus 122 lkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~ 191 (316)
T cd05620 122 LKLDNVMLDR--DGHIKIADFGMCKENVFGDNR------ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLI 191 (316)
T ss_pred CCHHHeEECC--CCCEEeCccCCCeecccCCCc------eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHh
Confidence 9999999985 789999999988653211110 011235777888998877777788999999988777653
No 61
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.53 E-value=8.4e-14 Score=151.22 Aligned_cols=186 Identities=17% Similarity=0.213 Sum_probs=119.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||+|++|+||+|+. +|+.||||+.+.. +. . .......+.+|..
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~-------~~---------~-----------------~~~~~~~~~~e~~ 53 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKW-------EM---------L-----------------KRAETACFREERD 53 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHH-------HH---------h-----------------hhhhHHHHHHHHH
Confidence 5799999999999998 5899999987531 00 0 0001112334444
Q ss_pred HHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
.+..+ ++++ ++..+. +.....++||||++|++|.++.......+....+...+ +-..+..+|..|++|+
T Consensus 54 ~l~~~-----~~~~--i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~ 126 (331)
T cd05597 54 VLVNG-----DRRW--ITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHR 126 (331)
T ss_pred HHHhC-----CCCC--CCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEC
Confidence 44332 2222 233332 23345799999999999998764322223333222222 2344788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCCCCCChHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVLVPTGDTTAVRRTAQ 527 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-----G~~~~~~D~~al~~~~~ 527 (760)
|+||.||+++. ++.++|+|||++..+....... .....+...++++++... +..+...|++++.-.+.
T Consensus 127 dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~ 199 (331)
T cd05597 127 DIKPDNVLLDK--NGHIRLADFGSCLRLLADGTVQ-----SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMY 199 (331)
T ss_pred CCCHHHEEECC--CCCEEEEECCceeecCCCCCcc-----ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHH
Confidence 99999999975 7899999999987765432210 011235667788887752 34556789999988776
Q ss_pred HHHH
Q 004334 528 FFLN 531 (760)
Q Consensus 528 ~~l~ 531 (760)
+++.
T Consensus 200 el~~ 203 (331)
T cd05597 200 EMLY 203 (331)
T ss_pred HHhh
Confidence 6653
No 62
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.53 E-value=8.9e-14 Score=152.16 Aligned_cols=181 Identities=14% Similarity=0.086 Sum_probs=121.9
Q ss_pred cccccccccEEEEEEE--C-CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--K-GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~-G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
+.||.|++|.||+|++ + +..||||+....... ..+....+.+|.
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~---------------------------------~~~~~~~~~~E~ 82 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII---------------------------------KQKQVDHVFSER 82 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh---------------------------------hhhhHHHHHHHH
Confidence 6899999999999987 2 368999976431000 001112234565
Q ss_pred HHHHHHHHhcCCCCc-eeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHH---HHHHHHHHHHHHHhCCccc
Q 004334 376 ANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRL---GRYAVESYLEQILSHGFFH 451 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~-V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~l---a~~lv~~~L~qI~~~GffH 451 (760)
..+..+. +++ +.+...+ ......++||||++|++|.++.... ..++.... +..+ -..+..+|..|++|
T Consensus 83 ~~l~~l~-----hp~Iv~~~~~~-~~~~~~~lv~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi-~~aL~~LH~~~ivH 154 (340)
T PTZ00426 83 KILNYIN-----HPFCVNLYGSF-KDESYLYLVLEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQI-VLIFEYLQSLNIVY 154 (340)
T ss_pred HHHHhCC-----CCCCcceEEEE-EeCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHH-HHHHHHHHHCCeEc
Confidence 5555542 232 2222222 3345579999999999998865422 22333222 2222 23478899999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+|+||+|||++. +|.++|+|||++..++.... ...+++.++++++......+...|+++++-.+.+++.
T Consensus 155 rDLkp~NILl~~--~~~ikL~DFG~a~~~~~~~~---------~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~ 223 (340)
T PTZ00426 155 RDLKPENLLLDK--DGFIKMTDFGFAKVVDTRTY---------TLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILV 223 (340)
T ss_pred cCCCHHHEEECC--CCCEEEecCCCCeecCCCcc---------eecCChhhcCHHHHhCCCCCccccccchhhHHHHHhc
Confidence 999999999985 88999999999987764321 1246778899998876666778899999987776653
No 63
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.53 E-value=2e-14 Score=155.36 Aligned_cols=185 Identities=18% Similarity=0.246 Sum_probs=120.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||+.+...... .+....+.+|..
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~~~~~e~~ 53 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA---------------------------------QETVSFFEEERD 53 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhHHHHHHHHHH
Confidence 5799999999999998 58999999876421000 011122334444
Q ss_pred HHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
.+..+ +++. ++.++. ......+|||||++|++|.++.......++...+...+ +-..++.+|..|++|+
T Consensus 54 i~~~~-----~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~ 126 (330)
T cd05601 54 ILSIS-----NSPW--IPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHR 126 (330)
T ss_pred HHHhC-----CCCC--CcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcc
Confidence 43332 2222 233322 33456799999999999998764332334433332222 3345788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH------cCCCCCCCChHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ------MGVLVPTGDTTAVRRTA 526 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~------lG~~~~~~D~~al~~~~ 526 (760)
|+||.||+++. +|.++|+|||++..+...... ......++..++++++.. .+..+...|+++++-.+
T Consensus 127 Dlkp~NIll~~--~~~~kL~Dfg~a~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il 199 (330)
T cd05601 127 DIKPENVLIDR--TGHIKLADFGSAARLTANKMV-----NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIA 199 (330)
T ss_pred cCchHheEECC--CCCEEeccCCCCeECCCCCce-----eeecccCCccccCHHHhccccccccCCCCCcceeeccccee
Confidence 99999999985 889999999999887643221 011123566788888775 34445678999988766
Q ss_pred HHHH
Q 004334 527 QFFL 530 (760)
Q Consensus 527 ~~~l 530 (760)
.+++
T Consensus 200 ~el~ 203 (330)
T cd05601 200 YEMI 203 (330)
T ss_pred eeec
Confidence 5543
No 64
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.53 E-value=6.4e-14 Score=151.31 Aligned_cols=186 Identities=18% Similarity=0.164 Sum_probs=117.2
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.||.|++|+||+|+. +|+.||||+..+..... ......+..|...
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---------------------------------~~~~~~~~~e~~~ 48 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILK---------------------------------KKEQKHIMAERNV 48 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh---------------------------------hhHHHHHHHHHHH
Confidence 589999999999999 69999999875521000 0000111122111
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCccccCCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHADPH 455 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHaDpH 455 (760)
+.+.+.+..-+.+...+ ......++||||++|++|.+..... ..+....+... .+-..+..+|..|++|+|+|
T Consensus 49 ---~~~~l~hp~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~givH~dik 123 (323)
T cd05575 49 ---LLKNVKHPFLVGLHYSF-QTADKLYFVLDYVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLNIIYRDLK 123 (323)
T ss_pred ---HHhhCCCCCCCCeeEEE-EeCCEEEEEEcCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCC
Confidence 11222222222222222 3345679999999999998765322 12333322221 12334788999999999999
Q ss_pred CCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 456 PGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 456 PGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
|.||+++. ++.++|+|||++......... .....+.+.+++++...-+..+...|+++++..+.+++.
T Consensus 124 p~NIll~~--~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~ 191 (323)
T cd05575 124 PENILLDS--QGHVVLTDFGLCKEGIEHSKT------TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLY 191 (323)
T ss_pred HHHeEECC--CCcEEEeccCCCcccccCCCc------cccccCChhhcChhhhcCCCCCccccccccchhhhhhhc
Confidence 99999985 889999999998754222110 011235677888888776667778999999987776653
No 65
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.53 E-value=6.6e-14 Score=151.80 Aligned_cols=184 Identities=17% Similarity=0.117 Sum_probs=120.2
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.||.|++|+||+|+. +|+.||||+.+...... .+....+.+|...
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~~~~~e~~~ 48 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD---------------------------------DEDIDWVQTEKHV 48 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhHHHHHHHHHHH
Confidence 589999999999998 58999999976531100 0111123344444
Q ss_pred HHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 378 AELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
+.++ .+++. ++.++. +.....++||||++|++|.+..... ..++...+.... +-..+..+|..|++|+|
T Consensus 49 ~~~~----~~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrD 121 (327)
T cd05617 49 FEQA----SSNPF--LVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHERGIIYRD 121 (327)
T ss_pred HHhh----cCCCC--EeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 4433 22333 233332 3345679999999999998754321 123333222221 22347889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+||.||+++. ++.++|+|||++.......... ....+...++++++...+..+...|+++++..+.+++.
T Consensus 122 lkp~Nili~~--~~~~kl~Dfg~~~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~ 191 (327)
T cd05617 122 LKLDNVLLDA--DGHIKLTDYGMCKEGLGPGDTT------STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMA 191 (327)
T ss_pred CCHHHEEEeC--CCCEEEeccccceeccCCCCce------ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHh
Confidence 9999999986 7899999999987532211100 11235677888888877667778999999988777654
No 66
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.53 E-value=1.2e-13 Score=149.71 Aligned_cols=187 Identities=15% Similarity=0.098 Sum_probs=118.5
Q ss_pred cccccccccEEEEEEE-------CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-------~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
+.||.|++|.||+|++ +++.||||+.+++.... ....+
T Consensus 13 ~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-----------------------------------~~~~~ 57 (338)
T cd05102 13 KVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATAS-----------------------------------EHKAL 57 (338)
T ss_pred eEeccCCcceEEEEEEeccCCcccchhhheeccccccchH-----------------------------------HHHHH
Confidence 6799999999999975 25789999876532110 01123
Q ss_pred HHHHHHHHHHHHhcCCCCc-eeeceeeeccCCCeEEEEeecCCCchhhhhhhhhc-------------------------
Q 004334 372 YQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL------------------------- 425 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~-V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~------------------------- 425 (760)
.+|...+.++. ++++ +.+...+.......+++|||++|++|.++......
T Consensus 58 ~~E~~~l~~l~----~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (338)
T cd05102 58 MSELKILIHIG----NHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRV 133 (338)
T ss_pred HHHHHHHHHhc----cCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhcc
Confidence 44555555442 2222 22222222223456899999999999886542110
Q ss_pred ------------------------------------CCCHHHHHHH--HHHHHHHHHHhCCccccCCCCCcEEEeccCCC
Q 004334 426 ------------------------------------GVDRKRLGRY--AVESYLEQILSHGFFHADPHPGNIAVDDVNGG 467 (760)
Q Consensus 426 ------------------------------------g~d~~~la~~--lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g 467 (760)
.+....+... .+...+..+|..|++|+|+||.||+++. ++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~--~~ 211 (338)
T cd05102 134 DRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSE--NN 211 (338)
T ss_pred ccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcC--CC
Confidence 0111222221 2233478899999999999999999985 78
Q ss_pred cEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 468 RLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 468 ~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
.++|+|||++..+....... ..+.......+++++....+..+...|++++.-.+.+++
T Consensus 212 ~~kl~DfG~a~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~ 270 (338)
T cd05102 212 VVKICDFGLARDIYKDPDYV----RKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIF 270 (338)
T ss_pred cEEEeecccccccccCcchh----cccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHH
Confidence 99999999998764332110 001112234577888777777788899999998776654
No 67
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.53 E-value=4.1e-14 Score=157.53 Aligned_cols=190 Identities=18% Similarity=0.189 Sum_probs=139.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|.|.||+||+|+. +|+.+|+|+........ .+....+.+|.+
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~---------------------------------~~~~~~v~~Ev~ 87 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRG---------------------------------KEDREDVRREVA 87 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccc---------------------------------cccHHHHHHHHH
Confidence 5799999999999999 59999999875421100 001234567777
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHH--HHHHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGR--YAVESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~--~lv~~~L~qI~~~GffHaDp 454 (760)
.++++.. +...|.++.+| +..+..+||||+++|+.|.|..... .+.....+. ..+-..++++|..|++|+|+
T Consensus 88 il~~l~~---hpniv~l~~~~-e~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gvvHrDl 161 (382)
T KOG0032|consen 88 ILQQLSG---HPNIVQLKDAF-EDPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGVVHRDL 161 (382)
T ss_pred HHHhccC---CCCEEEEEEEE-EcCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCceeccC
Confidence 7777643 44557777777 4556789999999999999854322 233332222 22334578899999999999
Q ss_pred CCCcEEEeccCC--CcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNG--GRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNS 532 (760)
Q Consensus 455 HPGNILV~~~~~--g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~~ 532 (760)
||+|+|+....+ ++++++|||++..+.+..+ ..-..+.+.+++++.+......+..|+++++...+.++..
T Consensus 162 KpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~-------~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G 234 (382)
T KOG0032|consen 162 KPENLLLASKDEGSGRIKLIDFGLAKFIKPGER-------LHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSG 234 (382)
T ss_pred CHHHeeeccccCCCCcEEEeeCCCceEccCCce-------EeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhC
Confidence 999999975333 5899999999999987322 2234689999999999877778899999999998888766
Q ss_pred HH
Q 004334 533 FE 534 (760)
Q Consensus 533 ~~ 534 (760)
+.
T Consensus 235 ~~ 236 (382)
T KOG0032|consen 235 VP 236 (382)
T ss_pred CC
Confidence 43
No 68
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.53 E-value=3.1e-15 Score=156.10 Aligned_cols=197 Identities=19% Similarity=0.252 Sum_probs=142.6
Q ss_pred HHHHHHHHHhCCChhhhhcccCccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCC
Q 004334 276 TAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKS 353 (760)
Q Consensus 276 ~v~~iie~elG~~~~~iF~~fd~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~ 353 (760)
+..+.=+..|.++++++|+-.. .+|.||+|.||+|.+ .|+.||||-..- +.
T Consensus 18 ~~~KLd~~sL~K~PEEVFDi~~--KLGEGSYGSV~KAIH~EsG~v~AIK~VPV------~s------------------- 70 (502)
T KOG0574|consen 18 DGFKLDSSALNKPPEEVFDIVG--KLGEGSYGSVHKAIHRESGHVLAIKKVPV------DT------------------- 70 (502)
T ss_pred cccccChhhhcCChHHHHHHHH--HhcCCcchHHHHHHHhccCcEEEEEecCc------cc-------------------
Confidence 3444556778899999987654 699999999999999 699999994321 22
Q ss_pred CccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeecc--CCCeEEEEeecCCCchhhhhhhhhcCCCHHH
Q 004334 354 DGAKRDWVAIYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWEY--TTPQILTMEYVPGIKINRIQSLDELGVDRKR 431 (760)
Q Consensus 354 ~~~~~~l~~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~--st~~vLVME~ieG~~L~d~~~l~~~g~d~~~ 431 (760)
|+.+|+.|+ ..|+++. . -+|-+.|..| .+..++|||||..++++|+..++...+...+
T Consensus 71 -----DLQEIIKEI--------SIMQQC~-----S--~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~E 130 (502)
T KOG0574|consen 71 -----DLQEIIKEI--------SIMQQCK-----S--KYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQE 130 (502)
T ss_pred -----hHHHHHHHH--------HHHHHcC-----C--chhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHH
Confidence 333444333 3444441 1 2344445444 3678999999999999999988887777777
Q ss_pred HHHHHHHHH--HHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH
Q 004334 432 LGRYAVESY--LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ 509 (760)
Q Consensus 432 la~~lv~~~--L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~ 509 (760)
++..+-... |+++|...-+|+|+|.||||++. +|..+|.|||.++++++.+... ..+-+++-.|++++++
T Consensus 131 Is~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT--~G~AKLADFGVAGQLTDTMAKR------NTVIGTPFWMAPEVI~ 202 (502)
T KOG0574|consen 131 ISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNT--DGIAKLADFGVAGQLTDTMAKR------NTVIGTPFWMAPEVIE 202 (502)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcc--cchhhhhhccccchhhhhHHhh------CccccCcccccHHHHH
Confidence 776654443 77889888999999999999985 8999999999999998864321 2234677777777654
Q ss_pred -cCCCCCCCChHHHHHHHHH
Q 004334 510 -MGVLVPTGDTTAVRRTAQF 528 (760)
Q Consensus 510 -lG~~~~~~D~~al~~~~~~ 528 (760)
.|+ ....|.+++.-.+-+
T Consensus 203 EIGY-~~~ADIWSLGITaIE 221 (502)
T KOG0574|consen 203 EIGY-DTKADIWSLGITAIE 221 (502)
T ss_pred Hhcc-chhhhHhhhcchhhh
Confidence 565 445788887755433
No 69
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.53 E-value=7.9e-14 Score=151.42 Aligned_cols=185 Identities=15% Similarity=0.126 Sum_probs=119.7
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.||.|++|+||+|+. +|+.||+|+.+...... .+....+..|...
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~~~~~E~~~ 48 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVND---------------------------------DEDIDWVQTEKHV 48 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcc---------------------------------hhHHHHHHHHHHH
Confidence 689999999999998 58999999976532110 0001112333333
Q ss_pred HHHHHHhcCCCCce-eeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 378 AELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 378 l~~f~~~~~~~~~V-~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
+.+. .+++++ .+-.. ....+..++||||++|++|.+..... ..++........ +...+..+|..|++|+|+
T Consensus 49 l~~~----~~hp~iv~~~~~-~~~~~~~~lv~E~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Di 122 (329)
T cd05618 49 FEQA----SNHPFLVGLHSC-FQTESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDL 122 (329)
T ss_pred HHhc----CCCCcCCceeeE-EEeCCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence 3222 123332 22222 23446679999999999997754321 223333322222 223478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
||.||+++. ++.++|+|||++......... .....++..++++++...+..+...|++++...+.+++.
T Consensus 123 kp~Nili~~--~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 191 (329)
T cd05618 123 KLDNVLLDS--EGHIKLTDYGMCKEGLRPGDT------TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 191 (329)
T ss_pred CHHHEEECC--CCCEEEeeCCccccccCCCCc------cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhh
Confidence 999999986 889999999998754221110 011245777888888877777778999999988777654
No 70
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.52 E-value=9.6e-14 Score=150.65 Aligned_cols=183 Identities=15% Similarity=0.125 Sum_probs=119.6
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.||.|++|.||+|+. +|+.||||+.+...... .+....+..|...
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~---------------------------------~~~~~~~~~e~~i 48 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVND---------------------------------DEDIDWVQTEKHV 48 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhHHHHHHHHHHH
Confidence 589999999999998 58999999976531100 0001122334333
Q ss_pred HHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 378 AELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
+..+ .+++++ +.++. ......+|+|||++|++|.+.... ...+....+.... +-..+..+|..|++|+|
T Consensus 49 l~~~----~~hp~I--v~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~d 121 (329)
T cd05588 49 FETA----SNHPFL--VGLHSCFQTESRLFFVIEFVSGGDLMFHMQR-QRKLPEEHARFYSAEISLALNFLHERGIIYRD 121 (329)
T ss_pred HHhc----cCCCCC--CceEEEEEcCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 3332 223332 23332 234567999999999999775432 1223333332222 22347889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccC-hhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSIS-PNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~-~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+||.||+++. ++.++|+|||++.... ..... ....++..++++++...+..+...|++++...+.+++.
T Consensus 122 lkp~Nili~~--~~~~kL~Dfg~~~~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~ 191 (329)
T cd05588 122 LKLDNVLLDA--EGHIKLTDYGMCKEGIRPGDTT-------STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 191 (329)
T ss_pred CCHHHeEECC--CCCEEECcCccccccccCCCcc-------ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHH
Confidence 9999999985 7899999999987532 11110 11245777888888877777778999999988777654
No 71
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.52 E-value=3.2e-14 Score=154.49 Aligned_cols=190 Identities=17% Similarity=0.169 Sum_probs=123.9
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|+. +|+.||||+.+...... .+....+..|..
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~~~~~e~~ 53 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK---------------------------------RNQIAHVRAERD 53 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh---------------------------------ccHHHHHHHHHH
Confidence 5799999999999999 59999999876421000 001112334444
Q ss_pred HHHHHHHhcCCCCceeeceee--eccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIF--WEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy--~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
.+..+. +++ +++++ .......++||||++|++|.++.... ..++...+...+ +-..+..+|..|++|+
T Consensus 54 ~l~~~~-----~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~giiH~ 125 (350)
T cd05573 54 ILADAD-----SPW--IVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFIHR 125 (350)
T ss_pred HHHhcC-----CCC--ccchhhheecCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 444432 222 22222 22345679999999999998875432 223333322222 2334788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHH-----------------------HHHHHHHhhcCHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL-----------------------LEAFYGIYEKDADKVLQAMVQ 509 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l-----------------------~~l~~al~~~D~~~v~~~l~~ 509 (760)
|+||.||+++. ++.++|+|||++..+........ .........++..++++++..
T Consensus 126 Dlkp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 203 (350)
T cd05573 126 DIKPDNILIDA--DGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLR 203 (350)
T ss_pred CCCHHHeEECC--CCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHc
Confidence 99999999986 88999999999987765430000 000011234677888999887
Q ss_pred cCCCCCCCChHHHHHHHHHHHH
Q 004334 510 MGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 510 lG~~~~~~D~~al~~~~~~~l~ 531 (760)
....++..|+++++-.+.+++.
T Consensus 204 ~~~~~~~~DiwSlG~il~ell~ 225 (350)
T cd05573 204 GTPYGLECDWWSLGVILYEMLY 225 (350)
T ss_pred CCCCCCceeeEecchhhhhhcc
Confidence 7777888999999987766653
No 72
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.52 E-value=7.1e-14 Score=154.34 Aligned_cols=190 Identities=17% Similarity=0.199 Sum_probs=120.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||+.... +... .+....+.+|..
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~--~~~~-------------------------------~~~~~~~~~E~~ 53 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKS--EMFK-------------------------------KDQLAHVKAERD 53 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHH--HHHH-------------------------------hHHHHHHHHHHH
Confidence 6799999999999998 6999999986431 0000 011122345555
Q ss_pred HHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHa 452 (760)
.+.++ ++++ |++++. ......+|||||++|++|.++.... ..+....+... .+-..+..+|..|++|+
T Consensus 54 il~~l-----~hp~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHr 125 (377)
T cd05629 54 VLAES-----DSPW--VVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLGFIHR 125 (377)
T ss_pred HHHhC-----CCCC--cceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 55443 2232 333333 3345679999999999998865321 22332222211 12234788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHH-HHHH---------------------------------------
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL-LEAF--------------------------------------- 492 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l-~~l~--------------------------------------- 492 (760)
|+||.||+++. ++.++|+|||++..+.......+ ..+.
T Consensus 126 Dlkp~NIll~~--~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (377)
T cd05629 126 DIKPDNILIDR--GGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRL 203 (377)
T ss_pred CCCHHHEEECC--CCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccc
Confidence 99999999985 88999999999864432111000 0000
Q ss_pred -HHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 493 -YGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 493 -~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
..-..++..+++++++.....+...|+++++-.+.+++.
T Consensus 204 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt 243 (377)
T cd05629 204 MAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLI 243 (377)
T ss_pred cccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhc
Confidence 000236677888988876666778899999887766653
No 73
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.52 E-value=8.8e-14 Score=153.98 Aligned_cols=184 Identities=21% Similarity=0.257 Sum_probs=120.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||+|+.... +... ......+.+|..
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~--~~~~-------------------------------~~~~~~~~~e~~ 95 (371)
T cd05622 49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF--EMIK-------------------------------RSDSAFFWEERD 95 (371)
T ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEEEHH--Hhhh-------------------------------hHHHHHHHHHHH
Confidence 6799999999999999 5899999986431 0000 000111233444
Q ss_pred HHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
.+..+ ++++ +++++. ......++||||++|++|.++.... ..+...+.... +-..+..+|..|++|+
T Consensus 96 i~~~~-----~hp~--iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 166 (371)
T cd05622 96 IMAFA-----NSPW--VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIHR 166 (371)
T ss_pred HHHhC-----CCCC--CCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence 34332 2232 223332 2334579999999999998875432 23333322221 2234788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc----CCCCCCCChHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM----GVLVPTGDTTAVRRTAQF 528 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l----G~~~~~~D~~al~~~~~~ 528 (760)
|+||.||+++. ++.++|+|||++..+....... .....+++.+++++++.. +..+...|+++++-.+++
T Consensus 167 DLkp~NIll~~--~~~ikL~DfG~a~~~~~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilye 239 (371)
T cd05622 167 DVKPDNMLLDK--SGHLKLADFGTCMKMNKEGMVR-----CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE 239 (371)
T ss_pred CCCHHHEEECC--CCCEEEEeCCceeEcCcCCccc-----ccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHH
Confidence 99999999985 8899999999998875432110 011246778889988764 235677899999988777
Q ss_pred HHH
Q 004334 529 FLN 531 (760)
Q Consensus 529 ~l~ 531 (760)
++.
T Consensus 240 ll~ 242 (371)
T cd05622 240 MLV 242 (371)
T ss_pred HHh
Confidence 654
No 74
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.52 E-value=6.6e-14 Score=155.02 Aligned_cols=185 Identities=19% Similarity=0.211 Sum_probs=120.1
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||+|+....- ... ..-...+.+|..
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~--~~~-------------------------------~~~~~~~~~e~~ 95 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFE--MIK-------------------------------RSDSAFFWEERD 95 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHH--hhh-------------------------------hhhHHHHHHHHH
Confidence 5799999999999999 58999999864310 000 000112233444
Q ss_pred HHHHHHHhcCCCCce-eeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V-~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHaD 453 (760)
.+..+ +++++ .+... .......++||||++|++|.++.... ..+...+... .+-..+..+|..|++|+|
T Consensus 96 i~~~~-----~hp~iv~~~~~-~~~~~~~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~IvHrD 167 (370)
T cd05621 96 IMAFA-----NSPWVVQLFCA-FQDDKYLYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMGLIHRD 167 (370)
T ss_pred HHHhC-----CCCCEeeEEEE-EEcCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 44333 23332 22222 23345679999999999999876432 2333322221 223447889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc----CCCCCCCChHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM----GVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l----G~~~~~~D~~al~~~~~~~ 529 (760)
+||.|||++. ++.++|+|||++..+....... .....+++.+++++++.- +..+...|+++++..+.++
T Consensus 168 LKp~NILl~~--~~~~kL~DFG~a~~~~~~~~~~-----~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyel 240 (370)
T cd05621 168 VKPDNMLLDK--HGHLKLADFGTCMKMDETGMVR-----CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEM 240 (370)
T ss_pred CCHHHEEECC--CCCEEEEecccceecccCCcee-----cccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHH
Confidence 9999999985 8899999999998875432110 012346778888888753 2356678999999877766
Q ss_pred HH
Q 004334 530 LN 531 (760)
Q Consensus 530 l~ 531 (760)
+.
T Consensus 241 l~ 242 (370)
T cd05621 241 LV 242 (370)
T ss_pred Hh
Confidence 53
No 75
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.52 E-value=2e-13 Score=150.18 Aligned_cols=203 Identities=19% Similarity=0.165 Sum_probs=130.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
.-||+|++|.|-.|+. +|+.|||||....- ....+ ..+....... ... +..++|..
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~------------~~~~~---~~~~~~a~~~------~~~-ekv~~EIa 160 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKE------------LRRQY---GFPRQPAMKL------MPI-EKVRREIA 160 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEEEEEeechhh------------hhhhc---cccccccccc------CcH-HHHHHHHH
Confidence 4699999999999998 69999999975410 00000 0010000000 011 23467778
Q ss_pred HHHHHHHhcCCCCceeeceeeecc-CCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHHHHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~-st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~lv~~~L~qI~~~GffHaDp 454 (760)
.|+++. |.+-|..-+|+.+- ++..|||.|||..+++...-.... ...+..+..-+-+-.-|+++|.+|++|||+
T Consensus 161 ilKkl~----H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDI 236 (576)
T KOG0585|consen 161 ILKKLH----HPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDI 236 (576)
T ss_pred HHHhcC----CcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeecccc
Confidence 888773 33346666666543 567899999999998876432221 222222212222334488999999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC----CCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV----LVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~----~~~~~D~~al~~~~~~~l 530 (760)
||.|+|++. +|++++.|||.+-..+...-+..-+.+.. ..+++..+++++...|- .....|+|+++..++-|+
T Consensus 237 KPsNLLl~~--~g~VKIsDFGVs~~~~~~~~~~~d~~L~~-tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCll 313 (576)
T KOG0585|consen 237 KPSNLLLSS--DGTVKISDFGVSNEFPQGSDEGSDDQLSR-TVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLL 313 (576)
T ss_pred chhheEEcC--CCcEEeeccceeeecccCCccccHHHHhh-cCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhh
Confidence 999999986 89999999999886633221111112222 56899999999887643 234569999998887665
No 76
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.52 E-value=6.5e-14 Score=151.02 Aligned_cols=185 Identities=18% Similarity=0.150 Sum_probs=115.2
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.||.|++|+||+|+. +|+.||||+........ ......+..|...
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~~~~~e~~~ 48 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILK---------------------------------KKEQNHIMAERNV 48 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH---------------------------------hhHHHHHHHHHHH
Confidence 589999999999999 58999999875421000 0000111122111
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCccccCCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHADPH 455 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHaDpH 455 (760)
+.+.+.+..-+.+-..+ ......++||||++|++|.+..... ..+....+... .+-..+..+|..|++|+|+|
T Consensus 49 ---~l~~~~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlk 123 (321)
T cd05603 49 ---LLKNLKHPFLVGLHYSF-QTAEKLYFVLDYVNGGELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLK 123 (321)
T ss_pred ---HHHhCCCCCccceeeEE-EcCCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCC
Confidence 11122222222222222 3345679999999999997654321 22333222221 22344788999999999999
Q ss_pred CCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 456 PGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 456 PGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|.||+++. +|.++|+|||++......... .....+...+++++.......+...|++++...+.+++
T Consensus 124 p~NIll~~--~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 190 (321)
T cd05603 124 PENILLDS--QGHVVLTDFGLCKEGVEPEET------TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEML 190 (321)
T ss_pred HHHeEECC--CCCEEEccCCCCccCCCCCCc------cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhh
Confidence 99999985 889999999998753221110 01123567788888877666777899999988776665
No 77
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.52 E-value=5.5e-14 Score=155.50 Aligned_cols=190 Identities=16% Similarity=0.180 Sum_probs=119.4
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|+. +|+.||||+.+.. +.. ..+....+.+|..
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~-------~~~--------------------------~~~~~~~~~~E~~ 53 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKK-------DVL--------------------------LRNQVAHVKAERD 53 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeHH-------Hhh--------------------------hHHHHHHHHHHHH
Confidence 5799999999999998 5899999986541 000 0011123345555
Q ss_pred HHHHHHHhcCCCCceeeceeeec--cCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e--~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
.+.++ ++++ |++.+.. .....+|||||++|++|.++.... ..+....+...+ +-..+..+|..|++|+
T Consensus 54 il~~~-----~h~~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~~ivHr 125 (382)
T cd05625 54 ILAEA-----DNEW--VVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKMGFIHR 125 (382)
T ss_pred HHHhC-----CCCc--CCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 55544 2222 3333322 234579999999999998865321 122322222111 2345788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhH--------------------------------------HHHH---HH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIR--------------------------------------EGLL---EA 491 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r--------------------------------------~~l~---~l 491 (760)
|+||.|||++. +|.++|+|||++..+..... .... ..
T Consensus 126 DlKp~NILl~~--~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (382)
T cd05625 126 DIKPDNILIDR--DGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRC 203 (382)
T ss_pred CCCHHHEEECC--CCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccc
Confidence 99999999985 88999999999754321000 0000 00
Q ss_pred HHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 492 FYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 492 ~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
...-..+.+.+++++++.-.......|+++++-.+.+++.
T Consensus 204 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ellt 243 (382)
T cd05625 204 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV 243 (382)
T ss_pred cccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHh
Confidence 0001235677888888766666778899999988776654
No 78
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.52 E-value=5.5e-14 Score=156.83 Aligned_cols=182 Identities=24% Similarity=0.274 Sum_probs=125.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+-||.||+|.||+|+. +++.||+|+...--+ -+.|+.. +++|.+
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr--~~k~l~~--------------------------------l~~ev~ 53 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR--NEKELKN--------------------------------LRQEVR 53 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCC--chHHHHH--------------------------------HHHHHH
Confidence 4699999999999998 589999998533111 1122222 233333
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCH-HHHHHHHHHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDR-KRLGRYAVESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~-~~la~~lv~~~L~qI~~~GffHaDp 454 (760)
.+..+ +|.+-|..-.-| |-++..++|.||+.| .|..+...+. .+.+. ..++..++ ..+..+|.+++.|+|+
T Consensus 54 i~r~l----kHpniv~m~esf-Et~~~~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LV-saL~yLhs~rilhrd~ 126 (808)
T KOG0597|consen 54 ILRSL----KHPNIVEMLESF-ETSAHLWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLV-SALYYLHSNRILHRDM 126 (808)
T ss_pred HHHhc----CCcchhhHHHhh-cccceEEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHH-HHHHHHHhcCcccccC
Confidence 33332 111112211111 445677999999999 8887654332 22222 22333333 4588999999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~ 529 (760)
||.||++.. +|.++|+|||+++-++... .+..-+.+++-+|++++.+-+...-..|+++++-.++++
T Consensus 127 kPqniLl~~--~~~~KlcdFg~Ar~m~~~t------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~ 193 (808)
T KOG0597|consen 127 KPQNILLEK--GGTLKLCDFGLARAMSTNT------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYEL 193 (808)
T ss_pred CcceeeecC--CCceeechhhhhhhcccCc------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHH
Confidence 999999985 8899999999999887743 234456899999999999988888889999999877654
No 79
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.51 E-value=1.1e-13 Score=149.90 Aligned_cols=189 Identities=14% Similarity=0.134 Sum_probs=120.6
Q ss_pred cccccccccEEEEEEE-----CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-----~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~ 373 (760)
+.||.|++|.||+|+. +|+.||+|+.+...... + ......+..
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~---~-----------------------------~~~~~~~~~ 53 (332)
T cd05614 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQ---K-----------------------------AKTVEHTRT 53 (332)
T ss_pred EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhh---h-----------------------------hhHHHHHHH
Confidence 5799999999999986 47899999875421000 0 001112334
Q ss_pred HHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccc
Q 004334 374 EAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFH 451 (760)
Q Consensus 374 EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffH 451 (760)
|...+.++ .+++.+....-+.+.....+++|||++|++|.+.... ...+....+...+ +-..+..+|..|++|
T Consensus 54 e~~~l~~l----~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 128 (332)
T cd05614 54 ERNVLEHV----RQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQ-RDNFSEDEVRFYSGEIILALEHLHKLGIVY 128 (332)
T ss_pred HHHHHHhc----cCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcEe
Confidence 44444443 2334333222222344567899999999999876532 2223433333222 233478899999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~~~~~~l 530 (760)
+|+||.|||++. ++.++|+|||++..+........ ....+...+++++++... ..+...|+++++-.+.+++
T Consensus 129 rDlkp~Nili~~--~~~~kl~DfG~~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 201 (332)
T cd05614 129 RDIKLENILLDS--EGHVVLTDFGLSKEFLSEEKERT-----YSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELL 201 (332)
T ss_pred cCCCHHHeEECC--CCCEEEeeCcCCccccccCCCcc-----ccccCCccccCHHHhcCCCCCCCccccccchhhhhhhh
Confidence 999999999985 78999999999876543321111 012367778888877532 2456789999998777665
Q ss_pred H
Q 004334 531 N 531 (760)
Q Consensus 531 ~ 531 (760)
.
T Consensus 202 t 202 (332)
T cd05614 202 T 202 (332)
T ss_pred c
Confidence 3
No 80
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.51 E-value=7.9e-14 Score=151.57 Aligned_cols=198 Identities=21% Similarity=0.239 Sum_probs=124.3
Q ss_pred HHHhCCChhhhhcccCc-cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCcccc
Q 004334 282 EEELGAPLDDVFERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKR 358 (760)
Q Consensus 282 e~elG~~~~~iF~~fd~-~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~ 358 (760)
++|++....++.+.|.. ++||.|++|+||+|.. +|+.||||+.........
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------------------------- 56 (343)
T cd07878 3 RQELNKTVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLI-------------------------- 56 (343)
T ss_pred HHHHhHHHhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhH--------------------------
Confidence 44555555555555543 7999999999999998 588999998765321110
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceee-----eccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHH
Q 004334 359 DWVAIYDECASVLYQEAANAELFASNFKDMDYVKVPTIF-----WEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLG 433 (760)
Q Consensus 359 ~l~~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy-----~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la 433 (760)
....+.+|.+.+.++. +...+.+..++ .......+++||++ |.++.++.... .++...+.
T Consensus 57 --------~~~~~~~E~~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~--~l~~~~~~ 121 (343)
T cd07878 57 --------HARRTYRELRLLKHMK----HENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKCQ--KLSDEHVQ 121 (343)
T ss_pred --------HHHHHHHHHHHHHhcC----CCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhcC--CCCHHHHH
Confidence 0011223444444432 11112222221 12234568999998 66777764322 23333332
Q ss_pred HHH--HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-
Q 004334 434 RYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM- 510 (760)
Q Consensus 434 ~~l--v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l- 510 (760)
..+ +-..+..+|..|++|+|+||+||+++. ++.++|+|||++..++..... ..++..++++++...
T Consensus 122 ~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~---------~~~t~~y~aPE~~~~~ 190 (343)
T cd07878 122 FLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE--DCELRILDFGLARQADDEMTG---------YVATRWYRAPEIMLNW 190 (343)
T ss_pred HHHHHHHHHHHHHHHCCeecccCChhhEEECC--CCCEEEcCCccceecCCCcCC---------ccccccccCchHhcCC
Confidence 222 223477899999999999999999985 889999999999887654221 124555677776644
Q ss_pred CCCCCCCChHHHHHHHHHHHH
Q 004334 511 GVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 511 G~~~~~~D~~al~~~~~~~l~ 531 (760)
...+...|+++++-.+.+++.
T Consensus 191 ~~~~~~~DiwslG~il~el~~ 211 (343)
T cd07878 191 MHYNQTVDIWSVGCIMAELLK 211 (343)
T ss_pred ccCCchhhhHhHHHHHHHHHH
Confidence 345667899999988777654
No 81
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.51 E-value=2.2e-14 Score=160.29 Aligned_cols=188 Identities=18% Similarity=0.241 Sum_probs=131.4
Q ss_pred hCCChhhhhcccCccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHH
Q 004334 285 LGAPLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVA 362 (760)
Q Consensus 285 lG~~~~~iF~~fd~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~ 362 (760)
+..+++.+|.... -||-||||-||.|+. +.+.||||-..-. .......|.+
T Consensus 20 ~k~DPEklf~dLr--EIGHGSFGAVYfArd~~n~evVAIKKMsyS-------------------------GKQs~EKWqD 72 (948)
T KOG0577|consen 20 FKDDPEKLFSDLR--EIGHGSFGAVYFARDVRNSEVVAIKKMSYS-------------------------GKQSNEKWQD 72 (948)
T ss_pred ccCCHHHHHHHHH--HhcCCccceeEEeeccCccceeeeeecccc-------------------------ccccHHHHHH
Confidence 3457788887654 599999999999999 5789999953211 1111224555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHH
Q 004334 363 IYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESY 440 (760)
Q Consensus 363 i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~ 440 (760)
|+.|+ +.+.++ .+.+.|..-..|-. .+..+||||||=|- -+|+......++...+||.... -..
T Consensus 73 IlKEV--------rFL~~l----~HPntieYkgCyLr-e~TaWLVMEYClGS-AsDlleVhkKplqEvEIAAi~~gaL~g 138 (948)
T KOG0577|consen 73 ILKEV--------RFLRQL----RHPNTIEYKGCYLR-EHTAWLVMEYCLGS-ASDLLEVHKKPLQEVEIAAITHGALQG 138 (948)
T ss_pred HHHHH--------HHHHhc----cCCCcccccceeec-cchHHHHHHHHhcc-HHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 55544 333333 34333433333322 23469999999874 5666665556666667766543 344
Q ss_pred HHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cCCCCCCC
Q 004334 441 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MGVLVPTG 517 (760)
Q Consensus 441 L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~---lG~~~~~~ 517 (760)
|.++|.++.+|+|+|.||||+++ .|.++|.|||.+...+|... +.+++..|+++++- -|-.+..+
T Consensus 139 LaYLHS~~~IHRDiKAGNILLse--~g~VKLaDFGSAsi~~PAns----------FvGTPywMAPEVILAMDEGqYdgkv 206 (948)
T KOG0577|consen 139 LAYLHSHNRIHRDIKAGNILLSE--PGLVKLADFGSASIMAPANS----------FVGTPYWMAPEVILAMDEGQYDGKV 206 (948)
T ss_pred HHHHHHhhHHhhhccccceEecC--CCeeeeccccchhhcCchhc----------ccCCccccchhHheeccccccCCcc
Confidence 88999999999999999999986 79999999999998888532 35788899888653 37778889
Q ss_pred ChHHHHHH
Q 004334 518 DTTAVRRT 525 (760)
Q Consensus 518 D~~al~~~ 525 (760)
|+|+++-.
T Consensus 207 DvWSLGIT 214 (948)
T KOG0577|consen 207 DVWSLGIT 214 (948)
T ss_pred ceeeccch
Confidence 99998754
No 82
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.51 E-value=5.8e-14 Score=155.50 Aligned_cols=193 Identities=19% Similarity=0.236 Sum_probs=125.9
Q ss_pred hhhhcccCccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHH
Q 004334 290 DDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDEC 367 (760)
Q Consensus 290 ~~iF~~fd~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~ 367 (760)
.+.|+.++ .||.|.|||||+|+. +|+.||+|-.+-+..+ .++
T Consensus 116 ~~~feki~--kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~----------------------------------~~~ 159 (560)
T KOG0600|consen 116 ADSFEKIE--KIGEGTYGQVYKARDLETGKIVALKKVRFDNEK----------------------------------EGF 159 (560)
T ss_pred hHHHHHHH--HhcCcchhheeEeeecccCcEEEEEEeecccCC----------------------------------Ccc
Confidence 34454443 699999999999998 6999999976543211 122
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCceeeceeee-ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHH---HHHHHHHHHHH
Q 004334 368 ASVLYQEAANAELFASNFKDMDYVKVPTIFW-EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRL---GRYAVESYLEQ 443 (760)
Q Consensus 368 ~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~-e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~l---a~~lv~~~L~q 443 (760)
-....+|...++++. |.+-+..-.++. ..++..|||.|||+- +|.-+.......+...++ +..++ .-+..
T Consensus 160 ~~t~~REI~ILr~l~----HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl-~Gl~~ 233 (560)
T KOG0600|consen 160 PITAIREIKILRRLD----HPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLL-EGLEY 233 (560)
T ss_pred hHHHHHHHHHHHhcC----CCcccceeeEEEecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHH-HHHHH
Confidence 233445666666651 222233333333 347788999999984 344333322223333332 22222 23667
Q ss_pred HHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHH
Q 004334 444 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 523 (760)
Q Consensus 444 I~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~ 523 (760)
+|..||+|||+|..||||+. +|.++|.|||++..++.+....|..-+..+..+-++.+ +...-.++.+|++++.
T Consensus 234 cH~~gvlHRDIK~SNiLidn--~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELL----LG~t~Yg~aVDlWS~G 307 (560)
T KOG0600|consen 234 CHSRGVLHRDIKGSNILIDN--NGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELL----LGATSYGTAVDLWSVG 307 (560)
T ss_pred HhhcCeeeccccccceEEcC--CCCEEeccccceeeccCCCCcccccceEEeeccChHHh----cCCcccccceeehhhh
Confidence 88999999999999999985 89999999999999998887777766666665555433 3333345678999887
Q ss_pred HHHHHHH
Q 004334 524 RTAQFFL 530 (760)
Q Consensus 524 ~~~~~~l 530 (760)
=++.+++
T Consensus 308 CIl~El~ 314 (560)
T KOG0600|consen 308 CILAELF 314 (560)
T ss_pred HHHHHHH
Confidence 6655443
No 83
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.51 E-value=8.4e-14 Score=152.41 Aligned_cols=181 Identities=14% Similarity=0.147 Sum_probs=116.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||+......+ .....+.+|++
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----------------------------------~~~~~~~~E~~ 124 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHED-----------------------------------TVRRQICREIE 124 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcH-----------------------------------HHHHHHHHHHH
Confidence 6799999999999998 5899999987553211 11223445656
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHP 456 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDpHP 456 (760)
.+..+. +..-+.+..+ .+.....+++|||++|++|.+...... .....++..++ ..+..+|..|++|+|+||
T Consensus 125 ~l~~l~----h~~iv~~~~~-~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~i~~qi~-~aL~~LH~~~ivHrDlkp 196 (353)
T PLN00034 125 ILRDVN----HPNVVKCHDM-FDHNGEIQVLLEFMDGGSLEGTHIADE--QFLADVARQIL-SGIAYLHRRHIVHRDIKP 196 (353)
T ss_pred HHHhCC----CCCcceeeeE-eccCCeEEEEEecCCCCcccccccCCH--HHHHHHHHHHH-HHHHHHHHCCEeecCCCH
Confidence 555542 2222222222 244566799999999998865321110 01122333333 347889999999999999
Q ss_pred CcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-----CCCCCCChHHHHHHHHHHH
Q 004334 457 GNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-----VLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 457 GNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-----~~~~~~D~~al~~~~~~~l 530 (760)
.||++++ ++.++|+|||++..+....... ....++..+++++.+... ......|++++...+.+++
T Consensus 197 ~NIll~~--~~~~kL~DfG~~~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~ 267 (353)
T PLN00034 197 SNLLINS--AKNVKIADFGVSRILAQTMDPC------NSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFY 267 (353)
T ss_pred HHEEEcC--CCCEEEcccccceecccccccc------cccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHH
Confidence 9999985 7899999999988765432110 012356667777765322 2234679999998776654
No 84
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.50 E-value=1.4e-13 Score=146.68 Aligned_cols=181 Identities=17% Similarity=0.205 Sum_probs=117.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..||.|++|+||+|.. +|+.||||..+-.... ....+.+|..
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~------------------------------------~~~~~~~e~~ 69 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQ------------------------------------RRELLFNEVV 69 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchh------------------------------------HHHHHHHHHH
Confidence 4699999999999998 6999999975321100 0112334444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+..+ .+..-+.+...+ ......+++|||++|.+|.++.... ..+...+...+ +-..+..+|..|++|+|+
T Consensus 70 ~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~givH~dl 142 (292)
T cd06657 70 IMRDY----QHENVVEMYNSY-LVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLKALSVLHAQGVIHRDI 142 (292)
T ss_pred HHHhc----CCcchhheeeEE-EeCCEEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 44433 222222233322 2345679999999999998865322 23333332222 223478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|.||+++. ++.++++|||++..+....... ....++..+++++...-+..++..|++++...+.+++
T Consensus 143 ~p~Nilv~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~ 210 (292)
T cd06657 143 KSDSILLTH--DGRVKLSDFGFCAQVSKEVPRR------KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 210 (292)
T ss_pred CHHHEEECC--CCCEEEcccccceecccccccc------cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHH
Confidence 999999985 7899999999988775543211 1122445567777766556677789999987776654
No 85
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.50 E-value=2.1e-13 Score=148.04 Aligned_cols=186 Identities=17% Similarity=0.195 Sum_probs=117.9
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+++. +++.||+|+.... +... ......+.+|..
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~--~~~~-------------------------------~~~~~~~~~e~~ 53 (332)
T cd05623 7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKW--EMLK-------------------------------RAETACFREERD 53 (332)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEeHH--HHHH-------------------------------hhHHHHHHHHHH
Confidence 5799999999999999 4789999986421 0000 000111233333
Q ss_pred HHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHa 452 (760)
.+..+ +++. ++.++. ......+|||||++|++|.++.......+....+... .+...+..+|..|++|+
T Consensus 54 ~l~~~-----~~~~--i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHr 126 (332)
T cd05623 54 VLVNG-----DNQW--ITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHR 126 (332)
T ss_pred HHhhC-----CCCC--EeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 33222 2232 233332 3345679999999999999876432222333222221 22334788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCCCCCChHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVLVPTGDTTAVRRTAQ 527 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-----G~~~~~~D~~al~~~~~ 527 (760)
|+||.||+++. ++.++|+|||++..+....... .....+...++++++... +......|++++...+.
T Consensus 127 Dlkp~Nili~~--~~~~kL~DfG~a~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ 199 (332)
T cd05623 127 DIKPDNILMDM--NGHIRLADFGSCLKLMEDGTVQ-----SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMY 199 (332)
T ss_pred CCCHHHEEECC--CCCEEEeecchheecccCCcce-----ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHH
Confidence 99999999985 7899999999987664332110 111235677888887752 34566789999998776
Q ss_pred HHHH
Q 004334 528 FFLN 531 (760)
Q Consensus 528 ~~l~ 531 (760)
+++.
T Consensus 200 ell~ 203 (332)
T cd05623 200 EMLY 203 (332)
T ss_pred HHhc
Confidence 6653
No 86
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.49 E-value=2.7e-13 Score=147.14 Aligned_cols=182 Identities=16% Similarity=0.170 Sum_probs=122.9
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|+. +|..||+|+.+..... +....+.+|.+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~-----------------------------------~~~~~~~~E~~ 55 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKP-----------------------------------AIRNQIIRELQ 55 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeecccCH-----------------------------------HHHHHHHHHHH
Confidence 5799999999999999 5899999987764221 11223445655
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh-CCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS-HGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~-~GffHaD 453 (760)
.+.++. +..-+.+..++ ......++||||++|++|.++.... ...+...+.... +...+..+|. ++++|+|
T Consensus 56 ~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~d 129 (331)
T cd06649 56 VLHECN----SPYIVGFYGAF-YSDGEISICMEHMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREKHQIMHRD 129 (331)
T ss_pred HHHHCC----CCCCCeEEEEE-EECCEEEEEeecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCC
Confidence 555542 22223333333 2345679999999999999875432 223333222222 2234677886 4799999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+||.||+++. ++.++|+|||++..+...... ...++..+++++....+..+...|+++++-.+.+++.
T Consensus 130 lkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~--------~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~t 197 (331)
T cd06649 130 VKPSNILVNS--RGEIKLCDFGVSGQLIDSMAN--------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAI 197 (331)
T ss_pred CChhhEEEcC--CCcEEEccCcccccccccccc--------cCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHh
Confidence 9999999986 789999999999877543221 1235667788888776667778899999987776653
No 87
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.49 E-value=1.3e-13 Score=152.62 Aligned_cols=185 Identities=20% Similarity=0.239 Sum_probs=119.7
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||+....- + .. ..-...+.+|..
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-------~---------~~-----------------~~~~~~~~~e~~ 95 (370)
T cd05596 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFE-------M---------IK-----------------RSDSAFFWEERD 95 (370)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH-------h---------hh-----------------hhhHHHHHHHHH
Confidence 6799999999999998 58999999875310 0 00 000111234444
Q ss_pred HHHHHHHhcCCCCc-eeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~-V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHaD 453 (760)
.+..+ ++++ +.+... .......++||||++|++|.++.... ......+... .+-..+..+|..|++|+|
T Consensus 96 il~~~-----~h~~iv~~~~~-~~~~~~~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD 167 (370)
T cd05596 96 IMAHA-----NSEWIVQLHYA-FQDDKYLYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSMGFIHRD 167 (370)
T ss_pred HHHhC-----CCCCcceEEEE-EecCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 44433 2232 222222 23345679999999999998875322 2333322221 223447889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc----CCCCCCCChHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM----GVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l----G~~~~~~D~~al~~~~~~~ 529 (760)
+||.|||++. ++.++|+|||++..+....... .....+.+.++++++..- +..+...|+++++-.+.++
T Consensus 168 Lkp~NILl~~--~~~~kL~DfG~~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyel 240 (370)
T cd05596 168 VKPDNMLLDK--SGHLKLADFGTCMKMDANGMVR-----CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 240 (370)
T ss_pred CCHHHEEEcC--CCCEEEEeccceeeccCCCccc-----CCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHH
Confidence 9999999985 8999999999998775432100 011246777888887653 2356678999999877766
Q ss_pred HH
Q 004334 530 LN 531 (760)
Q Consensus 530 l~ 531 (760)
+.
T Consensus 241 lt 242 (370)
T cd05596 241 LV 242 (370)
T ss_pred Hh
Confidence 53
No 88
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.49 E-value=1.8e-13 Score=147.99 Aligned_cols=187 Identities=16% Similarity=0.120 Sum_probs=119.2
Q ss_pred cccccccccEEEEEEE-----CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-----~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~ 373 (760)
+.||.|++|.||+|+. +|+.||||+.+..-. ..+ ......+..
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~---~~~-----------------------------~~~~~~~~~ 49 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATI---VRN-----------------------------QKDTAHTKA 49 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHH---Hhh-----------------------------hhhHHHHHH
Confidence 4699999999999986 378999998764200 000 000112345
Q ss_pred HHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccc
Q 004334 374 EAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFH 451 (760)
Q Consensus 374 EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffH 451 (760)
|...++.+. +..-+.+...+ ......+++|||++|++|.+...... .+....+...+ +-..+..+|..|++|
T Consensus 50 E~~il~~l~----hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH 123 (323)
T cd05584 50 ERNILEAVK----HPFIVDLIYAF-QTGGKLYLILEYLSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLHQQGIIY 123 (323)
T ss_pred HHHHHHhCC----CCchhceeeEE-ecCCeEEEEEeCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 555555542 22222222222 33456799999999999987653221 12222222211 223478899999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+|+||.||+++. ++.++|+|||++......... .....+...++++++..........|+++++..+.+++.
T Consensus 124 ~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~ 195 (323)
T cd05584 124 RDLKPENILLDA--QGHVKLTDFGLCKESIHEGTV------THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLT 195 (323)
T ss_pred CCCCHHHeEECC--CCCEEEeeCcCCeecccCCCc------ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhc
Confidence 999999999985 889999999998754322111 011235667888888766666778899999987766653
No 89
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.49 E-value=2.7e-13 Score=150.00 Aligned_cols=139 Identities=16% Similarity=0.145 Sum_probs=97.3
Q ss_pred ccccccccccEEEEEEE---CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL---KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l---~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E 374 (760)
...||.|+||+||+|++ +|+.||||+..+..... . .+.....+.+|
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~-----------------------------~--~~~~~~~~~~E 71 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWW-----------------------------S--KPLARHLAARE 71 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccc-----------------------------c--cHHHHHHHHHH
Confidence 36799999999999987 47888999865421100 0 01122346678
Q ss_pred HHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCC
Q 004334 375 AANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADP 454 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDp 454 (760)
++.+.++. ++++ +|.++. ....+|||||++|.+|.... .. ....+...++ ..+.++|..|++|+|+
T Consensus 72 ~~iL~~L~-----h~~i-v~~l~~--~~~~~LVmE~~~G~~L~~~~---~~--~~~~~~~~i~-~aL~~lH~~gIiHrDL 137 (365)
T PRK09188 72 IRALKTVR-----GIGV-VPQLLA--TGKDGLVRGWTEGVPLHLAR---PH--GDPAWFRSAH-RALRDLHRAGITHNDL 137 (365)
T ss_pred HHHHHhcc-----CCCC-CcEEEE--cCCcEEEEEccCCCCHHHhC---cc--chHHHHHHHH-HHHHHHHHCCCeeCCC
Confidence 88888773 2222 456664 25679999999999986321 11 1123333333 5578899999999999
Q ss_pred -CCCcEEEeccCCCcEEEEeecceeccChh
Q 004334 455 -HPGNIAVDDVNGGRLIFYDFGMMGSISPN 483 (760)
Q Consensus 455 -HPGNILV~~~~~g~l~LiDFG~v~~l~~~ 483 (760)
||+|||++. +++++|+|||++..+.+.
T Consensus 138 ~KP~NILv~~--~~~ikLiDFGlA~~~~~~ 165 (365)
T PRK09188 138 AKPQNWLMGP--DGEAAVIDFQLASVFRRR 165 (365)
T ss_pred CCcceEEEcC--CCCEEEEECccceecccC
Confidence 899999974 789999999999988654
No 90
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.49 E-value=6.2e-13 Score=135.21 Aligned_cols=183 Identities=18% Similarity=0.184 Sum_probs=125.5
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+++|+|++|+||++.. +|+.|++|+.++...+ ....+.+|..
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------------------------------------~~~~~~~e~~ 49 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKE------------------------------------KKEKIINEIQ 49 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccchh------------------------------------HHHHHHHHHH
Confidence 6899999999999999 4899999998764220 1112334444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI~~~GffHaDp 454 (760)
.+.++. ++++.-+.-........+++|||++|.+|.++.......++...+...+.. ..+..+|..|++|+|+
T Consensus 50 ~l~~l~-----~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl 124 (253)
T cd05122 50 ILKKCK-----HPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDI 124 (253)
T ss_pred HHHhCC-----CCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCC
Confidence 444432 222222221223346779999999999999876543234455554443322 3478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+|.||++++ ++.++|+|||.+..+.+... .....++..++.++....+..+...|++++...+.+++.
T Consensus 125 ~p~ni~i~~--~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~ 192 (253)
T cd05122 125 KAANILLTS--DGEVKLIDFGLSAQLSDTKA-------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAE 192 (253)
T ss_pred CHHHEEEcc--CCeEEEeecccccccccccc-------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHh
Confidence 999999986 78999999999988876542 011234556677777777767778999999877766553
No 91
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.49 E-value=3.9e-13 Score=141.82 Aligned_cols=187 Identities=19% Similarity=0.170 Sum_probs=117.8
Q ss_pred cccccccccEEEEEEE---CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL---KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l---~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
+.||.|++|.||+|+. .|+.||||+.+...... .......+|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~----------------------------------~~~~~~~~e~ 52 (290)
T cd07862 7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE----------------------------------GMPLSTIREV 52 (290)
T ss_pred eEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC----------------------------------CchHHHHHHH
Confidence 5799999999999987 37899999876532110 0000112233
Q ss_pred HHHHHHHHhcCCCCceeeceeee----ccCCCeEEEEeecCCCchhhhhhh-hhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004334 376 ANAELFASNFKDMDYVKVPTIFW----EYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYA--VESYLEQILSHG 448 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~----e~st~~vLVME~ieG~~L~d~~~l-~~~g~d~~~la~~l--v~~~L~qI~~~G 448 (760)
..+..+.. +.+..-+.+..++. +..+..+++|||++| .+.++... ...+.+...+...+ +-..+..+|..|
T Consensus 53 ~~l~~l~~-~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ 130 (290)
T cd07862 53 AVLRHLET-FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR 130 (290)
T ss_pred HHHHhhcc-cCCCCcceEEEEEecccCCCCCcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 33333321 22222233333321 123457999999986 66665432 22234433333222 223478899999
Q ss_pred ccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004334 449 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 528 (760)
Q Consensus 449 ffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~ 528 (760)
++|+|+||.||+++. ++.++|+|||++..++.... .....+...+++++....+......|++++...+.+
T Consensus 131 iiH~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~e 201 (290)
T cd07862 131 VVHRDLKPQNILVTS--SGQIKLADFGLARIYSFQMA-------LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE 201 (290)
T ss_pred eeeCCCCHHHEEEcC--CCCEEEccccceEeccCCcc-------cccccccccccChHHHhCCCCCCccchHHHHHHHHH
Confidence 999999999999985 78999999999987654311 111234566778888776667778899999987776
Q ss_pred HH
Q 004334 529 FL 530 (760)
Q Consensus 529 ~l 530 (760)
++
T Consensus 202 l~ 203 (290)
T cd07862 202 MF 203 (290)
T ss_pred HH
Confidence 65
No 92
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.48 E-value=1.4e-13 Score=152.34 Aligned_cols=200 Identities=16% Similarity=0.150 Sum_probs=135.9
Q ss_pred CCCCCHHHHHHHHHHHhCCChhhhhcccCc-cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHH
Q 004334 269 VPPFPSETAVSIVEEELGAPLDDVFERFDV-EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYL 346 (760)
Q Consensus 269 vpp~p~~~v~~iie~elG~~~~~iF~~fd~-~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l 346 (760)
..-++++++++.- ..|++ +-||.|+||.||+|.+ +|+.||||...++....
T Consensus 62 ~~~fs~~el~~AT------------~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~--------------- 114 (361)
T KOG1187|consen 62 LRSFSYDELRKAT------------NNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG--------------- 114 (361)
T ss_pred cceeeHHHHHHHH------------hCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc---------------
Confidence 3345666655543 35754 7899999999999999 67999999766542211
Q ss_pred hhhCCCCCccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeeccCC-CeEEEEeecCCCchhhhhhhhhc
Q 004334 347 QKIDPKSDGAKRDWVAIYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWEYTT-PQILTMEYVPGIKINRIQSLDEL 425 (760)
Q Consensus 347 ~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st-~~vLVME~ieG~~L~d~~~l~~~ 425 (760)
...+.+|...+.+++ |.+-|.+-... .... .++||.||++.++|.+.......
T Consensus 115 ---------------------~~eF~~Ei~~ls~l~----H~Nlv~LlGyC-~e~~~~~~LVYEym~nGsL~d~L~~~~~ 168 (361)
T KOG1187|consen 115 ---------------------EREFLNEVEILSRLR----HPNLVKLLGYC-LEGGEHRLLVYEYMPNGSLEDHLHGKKG 168 (361)
T ss_pred ---------------------hhHHHHHHHHHhcCC----CcCcccEEEEE-ecCCceEEEEEEccCCCCHHHHhCCCCC
Confidence 011344555555542 22223332211 1123 48999999999999987654332
Q ss_pred -CCC---HHHHHHHHHHHHHHHHHhCC---ccccCCCCCcEEEeccCCCcEEEEeecceeccCh-hhHHHHHHHHHHHh-
Q 004334 426 -GVD---RKRLGRYAVESYLEQILSHG---FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP-NIREGLLEAFYGIY- 496 (760)
Q Consensus 426 -g~d---~~~la~~lv~~~L~qI~~~G---ffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~-~~r~~l~~l~~al~- 496 (760)
.++ |-.||...++. +..+|... ++|+|+||.|||++. +...++.|||++...+. .... ...
T Consensus 169 ~~L~W~~R~kIa~g~A~g-L~yLH~~~~~~iiHrDiKssNILLD~--~~~aKlsDFGLa~~~~~~~~~~-------~~~~ 238 (361)
T KOG1187|consen 169 EPLDWETRLKIALGAARG-LAYLHEGCPPPIIHRDIKSSNILLDE--DFNAKLSDFGLAKLGPEGDTSV-------STTV 238 (361)
T ss_pred CCCCHHHHHHHHHHHHHH-HHHHccCCCCCEecCCCCHHHeeECC--CCCEEccCccCcccCCccccce-------eeec
Confidence 222 34454444444 88888754 999999999999985 88999999999966554 2211 011
Q ss_pred hcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 497 EKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 497 ~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
.++..++++++...|.++...|+++++..+.+++.
T Consensus 239 ~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElit 273 (361)
T KOG1187|consen 239 MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELIT 273 (361)
T ss_pred CCCCccCChhhhccCCcCcccccccchHHHHHHHh
Confidence 57888999999999999999999999987766543
No 93
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.48 E-value=1.2e-12 Score=140.87 Aligned_cols=199 Identities=19% Similarity=0.197 Sum_probs=129.1
Q ss_pred HHHHHhCCChhhhhcccCccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccc
Q 004334 280 IVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAK 357 (760)
Q Consensus 280 iie~elG~~~~~iF~~fd~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~ 357 (760)
+...-++.+++..|.. .+.+|.|++|+||+|+. +|+.||||+....-...
T Consensus 14 ~~~~~~~~~~~~~f~~--~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~-------------------------- 65 (317)
T cd06635 14 IAELFFKEDPEKLFTD--LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS-------------------------- 65 (317)
T ss_pred HHHHhcCCCchhhhhh--hheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCc--------------------------
Confidence 4555677788887764 35799999999999998 58999999865421100
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH-
Q 004334 358 RDWVAIYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA- 436 (760)
Q Consensus 358 ~~l~~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l- 436 (760)
.+....+.+|++.+.++ .+...+.+...+ ......++||||++| ++.+........++...+...+
T Consensus 66 -------~~~~~~~~~e~~~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~ 132 (317)
T cd06635 66 -------NEKWQDIIKEVKFLQRI----KHPNSIEYKGCY-LREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITH 132 (317)
T ss_pred -------hHHHHHHHHHHHHHHhC----CCCCEEEEEEEE-eeCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHH
Confidence 11112344555555544 222223333322 234567999999987 5666543333334444443332
Q ss_pred -HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cCC
Q 004334 437 -VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MGV 512 (760)
Q Consensus 437 -v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~---lG~ 512 (760)
+...+..+|..|++|+|++|+||+++. ++.++++|||++...+.... ..+...+++++... .+.
T Consensus 133 ~i~~~l~~lH~~~i~H~dL~p~Nil~~~--~~~~kl~dfg~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~ 200 (317)
T cd06635 133 GALQGLAYLHSHNMIHRDIKAGNILLTE--PGQVKLADFGSASIASPANS----------FVGTPYWMAPEVILAMDEGQ 200 (317)
T ss_pred HHHHHHHHHHHCCcccCCCCcccEEECC--CCCEEEecCCCccccCCccc----------ccCCccccChhhhhcCCCCC
Confidence 223468889999999999999999975 78999999999876654321 12344566666652 345
Q ss_pred CCCCCChHHHHHHHHHHHH
Q 004334 513 LVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 513 ~~~~~D~~al~~~~~~~l~ 531 (760)
.++..|++++...+.+++.
T Consensus 201 ~~~~~Dv~slGvil~el~~ 219 (317)
T cd06635 201 YDGKVDVWSLGITCIELAE 219 (317)
T ss_pred CCccccHHHHHHHHHHHHh
Confidence 6778899999887766653
No 94
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.48 E-value=3.1e-13 Score=141.82 Aligned_cols=187 Identities=17% Similarity=0.183 Sum_probs=121.1
Q ss_pred hhhhcccCccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHH
Q 004334 290 DDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDEC 367 (760)
Q Consensus 290 ~~iF~~fd~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~ 367 (760)
.+.|... +.||+|.+|.||+|.+ +|+.||||+......+. .
T Consensus 3 ~~~y~~~--~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~ 45 (277)
T cd06642 3 EELFTKL--ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAED-----------------------------------E 45 (277)
T ss_pred HHHHHHH--HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchH-----------------------------------H
Confidence 3444433 4699999999999998 58999999865421110 1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHH
Q 004334 368 ASVLYQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQ 443 (760)
Q Consensus 368 ~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~q 443 (760)
...+.+|+..+.++ ++++ +++.+. ......++||||++|+++.++... .......+...+ +-..+..
T Consensus 46 ~~~~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~ 116 (277)
T cd06642 46 IEDIQQEITVLSQC-----DSPY--ITRYYGSYLKGTKLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDY 116 (277)
T ss_pred HHHHHHHHHHHHcC-----CCCc--cHhhhcccccCCceEEEEEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHH
Confidence 12234455544443 1222 222222 234557999999999999886532 223333322222 2234677
Q ss_pred HHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHH
Q 004334 444 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 523 (760)
Q Consensus 444 I~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~ 523 (760)
+|..|++|+|+||+||++++ ++.+++.|||++..+....... ....++..+++++....+..+...|++++.
T Consensus 117 lH~~~ivH~dl~p~ni~i~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 188 (277)
T cd06642 117 LHSERKIHRDIKAANVLLSE--QGDVKLADFGVAGQLTDTQIKR------NTFVGTPFWMAPEVIKQSAYDFKADIWSLG 188 (277)
T ss_pred HhcCCeeccCCChheEEEeC--CCCEEEccccccccccCcchhh------hcccCcccccCHHHhCcCCCchhhhHHHHH
Confidence 89999999999999999985 7899999999998876543211 112345566777777666667778999998
Q ss_pred HHHHHHH
Q 004334 524 RTAQFFL 530 (760)
Q Consensus 524 ~~~~~~l 530 (760)
..+.+++
T Consensus 189 ~il~el~ 195 (277)
T cd06642 189 ITAIELA 195 (277)
T ss_pred HHHHHHH
Confidence 7766554
No 95
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.48 E-value=2.1e-13 Score=143.57 Aligned_cols=186 Identities=16% Similarity=0.172 Sum_probs=119.7
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||+.+...... +....+.+|..
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~----------------------------------~~~~~~~~E~~ 52 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENE----------------------------------EVKETTLRELK 52 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEecccccc----------------------------------cchhhHHHHHH
Confidence 5799999999999999 58999999876421100 01112234444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+.++. +..-+.+..++ +.....++||||++|..+..+... ..+.+...+...+ +-..+..+|..|++|+|+
T Consensus 53 ~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl 126 (287)
T cd07848 53 MLRTLK----QENIVELKEAF-RRRGKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDI 126 (287)
T ss_pred HHHhCC----CccccchhhhE-ecCCEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 444431 22222222222 234567999999999877655322 2234443333222 223477899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
||.||+++. ++.++|+|||++..+......... ...++..+++++....+..+...|+++++..+.+++.
T Consensus 127 kp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~ 196 (287)
T cd07848 127 KPENLLISH--NDVLKLCDFGFARNLSEGSNANYT-----EYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSD 196 (287)
T ss_pred CHHHEEEcC--CCcEEEeeccCccccccccccccc-----ccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHh
Confidence 999999985 789999999999887543221111 1124556777877766666778899999987766653
No 96
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.48 E-value=5.8e-13 Score=140.47 Aligned_cols=183 Identities=15% Similarity=0.144 Sum_probs=119.3
Q ss_pred cccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 301 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 301 IasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
||.|++|+||+++. +|+.||+|+........ ..-......|...+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~---------------------------------~~~~~~~~~E~~il 47 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK---------------------------------KSGEKMALLEKEIL 47 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc---------------------------------chhhHHHHHHHHHH
Confidence 68999999999998 59999999864310000 00001122344444
Q ss_pred HHHHHhcCCCCcee-eceeeeccCCCeEEEEeecCCCchhhhhhh-hhcCCCHHHHHHH--HHHHHHHHHHhCCccccCC
Q 004334 379 ELFASNFKDMDYVK-VPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRY--AVESYLEQILSHGFFHADP 454 (760)
Q Consensus 379 ~~f~~~~~~~~~V~-VP~vy~e~st~~vLVME~ieG~~L~d~~~l-~~~g~d~~~la~~--lv~~~L~qI~~~GffHaDp 454 (760)
.++ +++++. +...+ +.....+++|||++|++|.+.... ...+.+...+... .+-..+..+|..|++|+|+
T Consensus 48 ~~l-----~hp~i~~~~~~~-~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~di 121 (277)
T cd05607 48 EKV-----NSPFIVNLAYAF-ESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDM 121 (277)
T ss_pred Hhc-----CCCcEEEEEEEE-ecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccC
Confidence 443 233332 22222 334567999999999999875432 2223444433322 2334478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+|.||++++ ++.++|+|||++..+...... ....+...+++++....+..+...|++++.-.+.+++.
T Consensus 122 kp~Nili~~--~~~~~l~Dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~ 189 (277)
T cd05607 122 KPENVLLDD--QGNCRLSDLGLAVELKDGKTI-------TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVA 189 (277)
T ss_pred ChHhEEEcC--CCCEEEeeceeeeecCCCcee-------eccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHh
Confidence 999999986 789999999998877543211 01234566778888777777788999999887766653
No 97
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.48 E-value=1.8e-13 Score=155.83 Aligned_cols=185 Identities=16% Similarity=0.172 Sum_probs=119.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|+||||-+|.. +|+.|||||.+-.- .+.+.-..|.+
T Consensus 192 e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-------------------------------------~f~~Q~~~Ei~ 234 (586)
T KOG0667|consen 192 EVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-------------------------------------RFLRQAQIEIR 234 (586)
T ss_pred EEecccccceeEEEEecCCCcEEEEEeeccCh-------------------------------------HHHHHHHHHHH
Confidence 6899999999999999 59999999987631 11122234566
Q ss_pred HHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhh-hcCCCHHHHHHH--HHHHHHHHHHhCCccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRY--AVESYLEQILSHGFFH 451 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~-~~g~d~~~la~~--lv~~~L~qI~~~GffH 451 (760)
.++++.+.-. .....+-+.|. .+....+||.|.. +..|.+++... ..|+....+... -+-..|..+++.|++|
T Consensus 235 iL~~ln~~d~-~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIH 312 (586)
T KOG0667|consen 235 ILELLNKHDP-DDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIH 312 (586)
T ss_pred HHHHHhccCC-CCCeeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 6666654221 22233334433 4557789999988 46777766433 334444433222 2223467788999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
|||||+|||+.+.....|++||||.+...++..- .|+ .. -+...-+.++.+ -.....|+|+|+=++.++..
T Consensus 313 cDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy-tYi---QS----RfYRAPEVILGl-pY~~~IDmWSLGCIlAEL~t 383 (586)
T KOG0667|consen 313 CDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY-TYI---QS----RFYRAPEVILGL-PYDTAIDMWSLGCILAELFT 383 (586)
T ss_pred ccCChhheeeccCCcCceeEEecccccccCCcce-eee---ec----cccccchhhccC-CCCCccceeehhhhHHhHhc
Confidence 9999999999865556899999999998877543 111 11 122233334333 34667899999877666543
No 98
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.47 E-value=7e-13 Score=140.41 Aligned_cols=186 Identities=15% Similarity=0.098 Sum_probs=122.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||+..+..... ......+.+|..
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~~~~~E~~ 52 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKK---------------------------------RKGESMALNEKQ 52 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhh---------------------------------hhHHHHHHHHHH
Confidence 5799999999999999 58999999876531100 011122345666
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh-hcCCCHHHHHHHHH--HHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAV--ESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~-~~g~d~~~la~~lv--~~~L~qI~~~GffHaD 453 (760)
.+.++. +...+.+...+ ......+++|||++|+.+.+..... ..+++...+..... -..+..+|..|++|+|
T Consensus 53 il~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~d 127 (285)
T cd05632 53 ILEKVN----SQFVVNLAYAY-ETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRD 127 (285)
T ss_pred HHHHcC----CcCceeEEEEE-ecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence 666552 22223333333 2345679999999999998765322 22344444333322 2336889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+||+||++++ ++.++++|||++..++..... ....+...+++++...-+..+...|++++.-.+.+++.
T Consensus 128 ikp~Nili~~--~~~~kl~Dfg~~~~~~~~~~~-------~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~ 196 (285)
T cd05632 128 LKPENILLDD--YGHIRISDLGLAVKIPEGESI-------RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIE 196 (285)
T ss_pred CCHHHEEECC--CCCEEEecCCcceecCCCCcc-------cCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHh
Confidence 9999999985 789999999998776543211 01134566777887766666778899999877666543
No 99
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.47 E-value=2.1e-13 Score=149.12 Aligned_cols=194 Identities=18% Similarity=0.196 Sum_probs=120.8
Q ss_pred CCChhhhhcccC-ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHH
Q 004334 286 GAPLDDVFERFD-VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVA 362 (760)
Q Consensus 286 G~~~~~iF~~fd-~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~ 362 (760)
|...-.++..|. .+.||.|++|.||+|.. .|+.||||+........
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------------------------- 57 (355)
T cd07874 9 GDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ------------------------------- 57 (355)
T ss_pred CchhhhhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccCh-------------------------------
Confidence 333334555564 37899999999999998 58999999865422111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeec-----cCCCeEEEEeecCCCchhhhhhhhhcCCCHHHH---HH
Q 004334 363 IYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWE-----YTTPQILTMEYVPGIKINRIQSLDELGVDRKRL---GR 434 (760)
Q Consensus 363 i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e-----~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~l---a~ 434 (760)
.....+.+|...+..+ .+..-+.+..++.. .....+++|||++|.. .+... ...+...+ +.
T Consensus 58 ---~~~~~~~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l-~~~~~---~~l~~~~~~~~~~ 126 (355)
T cd07874 58 ---THAKRAYRELVLMKCV----NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANL-CQVIQ---MELDHERMSYLLY 126 (355)
T ss_pred ---HHHHHHHHHHHHHHHh----CCCchhceeeeeeccccccccceeEEEhhhhcccH-HHHHh---hcCCHHHHHHHHH
Confidence 0011123344444433 22222333333321 1134689999998853 33221 12333332 22
Q ss_pred HHHHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC
Q 004334 435 YAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV 514 (760)
Q Consensus 435 ~lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~ 514 (760)
.++ ..+..+|..|++|+|+||+||+++. ++.++|+|||++......... .-..++..++++++.......
T Consensus 127 qi~-~aL~~LH~~givHrDikp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~ 196 (355)
T cd07874 127 QML-CGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMM-------TPYVVTRYYRAPEVILGMGYK 196 (355)
T ss_pred HHH-HHHHHHHhCCcccCCCChHHEEECC--CCCEEEeeCcccccCCCcccc-------CCccccCCccCHHHHcCCCCC
Confidence 222 3478899999999999999999985 889999999999876543211 111345567778877655567
Q ss_pred CCCChHHHHHHHHHHHH
Q 004334 515 PTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 515 ~~~D~~al~~~~~~~l~ 531 (760)
+..|+++++-.+.+++.
T Consensus 197 ~~~DiwslG~il~el~~ 213 (355)
T cd07874 197 ENVDIWSVGCIMGEMVR 213 (355)
T ss_pred chhhHHHHHHHHHHHHh
Confidence 78899999987776653
No 100
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.47 E-value=3.2e-13 Score=145.88 Aligned_cols=184 Identities=17% Similarity=0.152 Sum_probs=117.2
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.||.|++|.||+|+. +|+.||||+.++..... +........|...
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---------------------------------~~~~~~~~~e~~~ 48 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM---------------------------------DDDVECTMVEKRV 48 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------cchHHHHHHHHHH
Confidence 589999999999998 48899999987632100 0000111223222
Q ss_pred HHHHHHhcCCCCce-eeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHH---HHHHHHHHHHHHHHhCCccccC
Q 004334 378 AELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLEQILSHGFFHAD 453 (760)
Q Consensus 378 l~~f~~~~~~~~~V-~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~---la~~lv~~~L~qI~~~GffHaD 453 (760)
+.. .+ +++++ .+...+ ......+++|||++|++|.+..... ...+... ++..++ ..+..+|..|++|+|
T Consensus 49 l~~---~~-~hp~iv~~~~~~-~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~-~al~~LH~~~ivHrd 121 (316)
T cd05619 49 LSL---AW-EHPFLTHLYCTF-QTKENLFFVMEYLNGGDLMFHIQSC-HKFDLPRATFYAAEII-CGLQFLHSKGIVYRD 121 (316)
T ss_pred HHh---cc-CCCcCcceEEEE-EeCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHH-HHHHHHHhCCeEeCC
Confidence 221 11 23332 222222 2345578999999999998765321 1233222 222223 347889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+||.||+++. ++.++|+|||++.......... .-..++..++++++......+...|+++++-.+.+++.
T Consensus 122 ikp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~ 191 (316)
T cd05619 122 LKLDNILLDT--DGHIKIADFGMCKENMLGDAKT------CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLI 191 (316)
T ss_pred CCHHHEEECC--CCCEEEccCCcceECCCCCCce------eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHh
Confidence 9999999985 7899999999987532211100 11235667888888876667788999999988776653
No 101
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.47 E-value=7.2e-13 Score=140.35 Aligned_cols=186 Identities=16% Similarity=0.108 Sum_probs=120.5
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|.. +|+.||||+........ .+....+.+|+.
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---------------------------------~~~~~~~~~E~~ 52 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK---------------------------------RKGEAMALNEKQ 52 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhh---------------------------------hhhHHHHHHHHH
Confidence 5699999999999998 58999999875521100 001112334555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh-hcCCCHHHHHHHHH--HHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAV--ESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~-~~g~d~~~la~~lv--~~~L~qI~~~GffHaD 453 (760)
.+.++. +..-+.+...+ ......+++|||++|++|.+..... ...++...+..... -..+..+|..|++|+|
T Consensus 53 ~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d 127 (285)
T cd05605 53 ILEKVN----SRFVVSLAYAY-ETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRD 127 (285)
T ss_pred HHHhcC----CCCEeeeeeee-cCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecC
Confidence 555542 22222232222 2334679999999999998765322 12344443333222 2336789999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
++|.||++++ ++.++++|||++..+....... ...+...++++++..-+..+...|++++.-.+.+++.
T Consensus 128 lkp~Nil~~~--~~~~~l~Dfg~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~ 196 (285)
T cd05605 128 LKPENILLDD--YGHIRISDLGLAVEIPEGETIR-------GRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIE 196 (285)
T ss_pred CCHHHEEECC--CCCEEEeeCCCceecCCCCccc-------cccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHH
Confidence 9999999985 7899999999988765432110 1124556677777766666777899999877766553
No 102
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.47 E-value=2.5e-13 Score=152.41 Aligned_cols=191 Identities=17% Similarity=0.184 Sum_probs=134.2
Q ss_pred ChhhhhcccCccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHH
Q 004334 288 PLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYD 365 (760)
Q Consensus 288 ~~~~iF~~fd~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~ 365 (760)
++...|..| +.||.|+-|-||.|+. +++.||||...- ..+-..+ -++.
T Consensus 270 dP~~~y~~~--~kigqgaSG~vy~A~~~~~~~~VaiK~m~l--~~Q~~ke--------------------------Liln 319 (550)
T KOG0578|consen 270 DPRSKYTDF--KKIGQGATGGVYVARKISTKQEVAIKRMDL--RKQPKKE--------------------------LLLN 319 (550)
T ss_pred Chhhhhcch--hhhccccccceeeeeeccCCceEEEEEEEe--ccCCchh--------------------------hhHH
Confidence 445555555 4699999999999998 688999996421 1111111 1223
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHH
Q 004334 366 ECASVLYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQ 443 (760)
Q Consensus 366 E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~q 443 (760)
|+.-....+..|+..|-+-+ + +.++.+.||||++|++|+|+..... .+..++|...- -..|+.
T Consensus 320 Ei~Vm~~~~H~NiVnfl~Sy------------l-v~deLWVVMEym~ggsLTDvVt~~~--~~E~qIA~Icre~l~aL~f 384 (550)
T KOG0578|consen 320 EILVMRDLHHPNIVNFLDSY------------L-VGDELWVVMEYMEGGSLTDVVTKTR--MTEGQIAAICREILQGLKF 384 (550)
T ss_pred HHHHHHhccchHHHHHHHHh------------c-ccceeEEEEeecCCCchhhhhhccc--ccHHHHHHHHHHHHHHHHH
Confidence 32211112234444443322 1 2367899999999999999865433 45556655433 334888
Q ss_pred HHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHH
Q 004334 444 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 523 (760)
Q Consensus 444 I~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~ 523 (760)
+|..|++|+|+|..|||+.. +|.++|.|||++.+++++... .+-+-++++.|+++........+.+|+|+|+
T Consensus 385 LH~~gIiHrDIKSDnILL~~--~g~vKltDFGFcaqi~~~~~K------R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLG 456 (550)
T KOG0578|consen 385 LHARGIIHRDIKSDNILLTM--DGSVKLTDFGFCAQISEEQSK------RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLG 456 (550)
T ss_pred HHhcceeeeccccceeEecc--CCcEEEeeeeeeeccccccCc------cccccCCCCccchhhhhhcccCccccchhhh
Confidence 99999999999999999986 899999999999999987631 2345689999999999987778899999999
Q ss_pred HHHHHHHH
Q 004334 524 RTAQFFLN 531 (760)
Q Consensus 524 ~~~~~~l~ 531 (760)
-.+-+|++
T Consensus 457 IMaIEMve 464 (550)
T KOG0578|consen 457 IMAIEMVE 464 (550)
T ss_pred hHHHHHhc
Confidence 87766654
No 103
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.46 E-value=2e-13 Score=162.13 Aligned_cols=118 Identities=20% Similarity=0.253 Sum_probs=88.9
Q ss_pred eEEEEeecCCCchhhhhhhhhcCCCHHHHHH---HHHHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceecc
Q 004334 404 QILTMEYVPGIKINRIQSLDELGVDRKRLGR---YAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 480 (760)
Q Consensus 404 ~vLVME~ieG~~L~d~~~l~~~g~d~~~la~---~lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l 480 (760)
.||||||++|+.|-.+..- .+.-+...|+ .-+-..+..||..|++|||+||.|||++. .|.|+|.|||.+-.+
T Consensus 150 LYlVMdY~pGGDlltLlSk--~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~--~GHikLADFGsClkm 225 (1317)
T KOG0612|consen 150 LYLVMDYMPGGDLLTLLSK--FDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDK--SGHIKLADFGSCLKM 225 (1317)
T ss_pred eEEEEecccCchHHHHHhh--cCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecc--cCcEeeccchhHHhc
Confidence 5899999999998876532 2211222222 22334578899999999999999999986 899999999999988
Q ss_pred ChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCCCCCChHHHHHHHHHHH
Q 004334 481 SPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 481 ~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-----G~~~~~~D~~al~~~~~~~l 530 (760)
+.+-. .-..+.-|+|+|+.+++++. |...+..|-|+++..+++|+
T Consensus 226 ~~dG~-----V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMl 275 (1317)
T KOG0612|consen 226 DADGT-----VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEML 275 (1317)
T ss_pred CCCCc-----EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHH
Confidence 75422 11234468999999988763 56778899999998888776
No 104
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.46 E-value=8.6e-13 Score=136.67 Aligned_cols=179 Identities=15% Similarity=0.155 Sum_probs=120.3
Q ss_pred cccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
+.+|.|++|.||+|..+|+.|++|..+.+.. ...+.+|+..+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~--------------------------------------~~~~~~e~~~l 53 (256)
T cd05082 12 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDAT--------------------------------------AQAFLAEASVM 53 (256)
T ss_pred eeecccCCCeEEEEEEcCCcEEEEEeCCCch--------------------------------------HHHHHHHHHHH
Confidence 5799999999999999999999998643210 11234455555
Q ss_pred HHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhc-CCCHHHHHHHH--HHHHHHHHHhCCccccCCC
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL-GVDRKRLGRYA--VESYLEQILSHGFFHADPH 455 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~-g~d~~~la~~l--v~~~L~qI~~~GffHaDpH 455 (760)
.++ .+...+.+...+.+.....+++|||++|++|.++...... ..+...+.... +-..+..+|..|++|+|++
T Consensus 54 ~~l----~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk 129 (256)
T cd05082 54 TQL----RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLA 129 (256)
T ss_pred HhC----CCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccc
Confidence 544 2222333333333344567999999999999987543222 13333333222 2244788999999999999
Q ss_pred CCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 456 PGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 456 PGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|+||++++ ++.++|+|||++......... ......+++++....+..+...|++++.-.+.+++
T Consensus 130 p~nil~~~--~~~~kl~dfg~~~~~~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~ 193 (256)
T cd05082 130 ARNVLVSE--DNVAKVSDFGLTKEASSTQDT---------GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 193 (256)
T ss_pred hheEEEcC--CCcEEecCCccceeccccCCC---------CccceeecCHHHHccCCCCchhhhHHHHHHHHHHH
Confidence 99999986 889999999998765432211 12234567777777777777889999987766554
No 105
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.46 E-value=4.6e-13 Score=142.03 Aligned_cols=182 Identities=13% Similarity=0.072 Sum_probs=113.5
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||+|+.+...... ....+.+|.+
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~E~~ 55 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG-----------------------------------APCTAIREVS 55 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccCC-----------------------------------cchhHHHHHH
Confidence 6799999999999998 58999999875421100 0011234555
Q ss_pred HHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHa 452 (760)
.+.++ . +++ |.+++. ......++||||++| ++.+.............+... .+-..+..+|..|++|+
T Consensus 56 ~l~~l----~-h~n--iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~ 127 (288)
T cd07871 56 LLKNL----K-HAN--IVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHR 127 (288)
T ss_pred HHHhC----C-CCC--EeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 55444 2 233 233332 233456899999998 676654322222233322222 22334788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~l~ 531 (760)
|+||.||+++. ++.++|+|||++.......... .-..+...++++++..- ...+...|+++++..+.+++.
T Consensus 128 dlkp~Nil~~~--~~~~kl~DfG~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~ 199 (288)
T cd07871 128 DLKPQNLLINE--KGELKLADFGLARAKSVPTKTY------SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMAT 199 (288)
T ss_pred CCCHHHEEECC--CCCEEECcCcceeeccCCCccc------cCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHh
Confidence 99999999985 7899999999987654322110 00123455667776543 234566899999887766543
No 106
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.46 E-value=8.4e-13 Score=135.46 Aligned_cols=187 Identities=17% Similarity=0.173 Sum_probs=124.8
Q ss_pred cccccccccEEEEEEEC-----CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK-----GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~-----G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~ 373 (760)
+.||.|++|+||+|... +..|+||+.++..... -...+.+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------~~~~~~~ 45 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-----------------------------------ERKDFLK 45 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-----------------------------------HHHHHHH
Confidence 36899999999999993 7899999987642211 0112344
Q ss_pred HHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh--------hcCCCHHHHHHHHHH--HHHHH
Q 004334 374 EAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD--------ELGVDRKRLGRYAVE--SYLEQ 443 (760)
Q Consensus 374 EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~--------~~g~d~~~la~~lv~--~~L~q 443 (760)
|.+.+..+. +..-+.+..++ ......+++|||++|.+|.++.... ....+...+...+.+ ..+..
T Consensus 46 e~~~l~~~~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~ 120 (262)
T cd00192 46 EARVMKKLG----HPNVVRLLGVC-TEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY 120 (262)
T ss_pred HHHHHhhcC----CCChheeeeee-cCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 555555442 21112222222 2355679999999999999876543 233444444433332 33788
Q ss_pred HHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHH
Q 004334 444 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 523 (760)
Q Consensus 444 I~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~ 523 (760)
+|..|++|+|++|.||+++. ++.++|+|||.+..+....... ...-...+..+++++....+..+...|++++.
T Consensus 121 lH~~~i~H~di~p~nili~~--~~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 194 (262)
T cd00192 121 LASKKFVHRDLAARNCLVGE--DLVVKISDFGLSRDVYDDDYYR----KKTGGKLPIRWMAPESLKDGIFTSKSDVWSFG 194 (262)
T ss_pred HHcCCcccCccCcceEEECC--CCcEEEcccccccccccccccc----cccCCCcCccccCHHHhccCCcchhhccHHHH
Confidence 99999999999999999986 7899999999998876543100 00112234567788877776677788999998
Q ss_pred HHHHHHHH
Q 004334 524 RTAQFFLN 531 (760)
Q Consensus 524 ~~~~~~l~ 531 (760)
..+.+++.
T Consensus 195 ~il~~l~~ 202 (262)
T cd00192 195 VLLWEIFT 202 (262)
T ss_pred HHHHHHHh
Confidence 87766653
No 107
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.46 E-value=3.9e-13 Score=145.10 Aligned_cols=184 Identities=20% Similarity=0.166 Sum_probs=118.2
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
-||.|++|.||+|+. +|+.||||+.+...... .+....+..|...
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~~~~~e~~i 48 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ---------------------------------DDDVECTMTEKRV 48 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh---------------------------------hhHHHHHHHHHHH
Confidence 489999999999999 58899999876421000 0000112234333
Q ss_pred HHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 378 AELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
+.... ++++ +++++. +.....++||||++|++|.+..... ..++...+...+ +-..+..+|..|++|+|
T Consensus 49 l~~~~----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~d 121 (318)
T cd05570 49 LALAG----KHPF--LTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHERGIIYRD 121 (318)
T ss_pred HHhcc----CCCC--ccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEccC
Confidence 33321 2332 333332 3345679999999999998754322 223433333222 22346789999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
++|.||+++. ++.++|+|||++.......... ....++..++++++...+..+...|+++++-.+.+++.
T Consensus 122 lkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~------~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~ 191 (318)
T cd05570 122 LKLDNVLLDS--EGHIKIADFGMCKEGILGGVTT------STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLA 191 (318)
T ss_pred CCHHHeEECC--CCcEEecccCCCeecCcCCCcc------cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhh
Confidence 9999999986 7899999999886532211100 11235677888888877677788899999987766653
No 108
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.46 E-value=3.5e-13 Score=138.80 Aligned_cols=185 Identities=19% Similarity=0.271 Sum_probs=122.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||+|++|.||+|+. +|+.||+|+....-... .......+|+.
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~----------------------------------~~~~~~~~e~~ 50 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE----------------------------------EEREENIREIK 50 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH----------------------------------HHHHHHHHHHH
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc----------------------------------cccchhhhhhh
Confidence 5799999999999999 58899999987632111 11111223666
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI~~~GffHaDp 454 (760)
.++++. +..-+.+..++ ......+++|||++|.+|.++.. ....++...+...+.+ ..+..+|..|++|+|+
T Consensus 51 ~~~~l~----~~~i~~~~~~~-~~~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~di 124 (260)
T PF00069_consen 51 ILRRLR----HPNIVQILDVF-QDDNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDI 124 (260)
T ss_dssp HHHHHT----BTTBCHEEEEE-EESSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSB
T ss_pred cccccc----ccccccccccc-ccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccc
Confidence 666662 22222233333 33667799999999999988765 2333444444333322 3478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~-lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+|.||+++. ++.++|+|||.+..++..... .....++..+.++++.. ........|++++...+.+++.
T Consensus 125 kp~NIl~~~--~~~~~l~Dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 194 (260)
T PF00069_consen 125 KPENILLDE--NGEVKLIDFGSSVKLSENNEN------FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLT 194 (260)
T ss_dssp SGGGEEEST--TSEEEESSGTTTEESTSTTSE------BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHH
T ss_pred ccccccccc--ccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccc
Confidence 999999985 889999999998754211110 01123455667777776 5666777899999887766554
No 109
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.46 E-value=5.2e-13 Score=152.91 Aligned_cols=185 Identities=16% Similarity=0.107 Sum_probs=123.4
Q ss_pred ccccccccccEEEEEEE--C-CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--K-GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~-G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E 374 (760)
.+.+|.|++|.||+|.. + ++.||+|.....-.. -...+..|
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~------------------------------------~~~~~~~E 115 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDER------------------------------------QAAYARSE 115 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHH------------------------------------HHHHHHHH
Confidence 35799999999999987 4 788999964321100 01123345
Q ss_pred HHHHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhh--h-hcCCCHHHHHHHH--HHHHHHHHHhC
Q 004334 375 AANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSL--D-ELGVDRKRLGRYA--VESYLEQILSH 447 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l--~-~~g~d~~~la~~l--v~~~L~qI~~~ 447 (760)
+..+..+ ++++ |++++. ......+|||||++|++|.+.... . ...++...+...+ +...+..+|..
T Consensus 116 ~~~l~~l-----~Hpn--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~ 188 (478)
T PTZ00267 116 LHCLAAC-----DHFG--IVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR 188 (478)
T ss_pred HHHHHhC-----CCCC--EeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 5555443 2333 333332 334668999999999999875431 1 1223333332222 33457889999
Q ss_pred CccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004334 448 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 527 (760)
Q Consensus 448 GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~ 527 (760)
|++|+|+||.|||++. ++.++|+|||++..+........ .....+++.+++++....+..+...|++++.-.+.
T Consensus 189 ~ivHrDlkp~NIll~~--~~~~kL~DFgla~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 262 (478)
T PTZ00267 189 KMMHRDLKSANIFLMP--TGIIKLGDFGFSKQYSDSVSLDV----ASSFCGTPYYLAPELWERKRYSKKADMWSLGVILY 262 (478)
T ss_pred CEEECCcCHHhEEECC--CCcEEEEeCcCceecCCcccccc----ccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHH
Confidence 9999999999999985 88999999999988765432111 11123677788998887777777889999998777
Q ss_pred HHHH
Q 004334 528 FFLN 531 (760)
Q Consensus 528 ~~l~ 531 (760)
+++.
T Consensus 263 el~t 266 (478)
T PTZ00267 263 ELLT 266 (478)
T ss_pred HHHh
Confidence 6653
No 110
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.46 E-value=1e-12 Score=137.15 Aligned_cols=200 Identities=17% Similarity=0.104 Sum_probs=122.8
Q ss_pred hcccCccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHH
Q 004334 293 FERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 370 (760)
Q Consensus 293 F~~fd~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~ 370 (760)
|.++..+++|.|++|+||+|.. +|+.||||..+........ ......+..+.
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~--------------------------~~~~~~~~~~~ 54 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGR--------------------------HDSRQKDMVKA 54 (272)
T ss_pred CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcc--------------------------cchHHHHHHHH
Confidence 4566678999999999999987 6899999976542111100 00001112234
Q ss_pred HHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHH---HHHHHHHHHHHHHhC
Q 004334 371 LYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRL---GRYAVESYLEQILSH 447 (760)
Q Consensus 371 l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~l---a~~lv~~~L~qI~~~ 447 (760)
+..|+..+..+. +..-+.+.. +.......++||||++|++|.+..... ..++...+ +..++ ..+..+|..
T Consensus 55 ~~~e~~~l~~l~----h~~i~~~~~-~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~-~~l~~lH~~ 127 (272)
T cd06629 55 LRSEIETLKDLD----HLNIVQYLG-FETTEEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVL-EGLAYLHSK 127 (272)
T ss_pred HHHHHHHHHhcC----CCCcceEEE-EeccCCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHH-HHHHHHhhC
Confidence 455665555542 222222222 223345679999999999998865322 22332222 22222 346789999
Q ss_pred CccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC--CCCCCChHHHHHH
Q 004334 448 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV--LVPTGDTTAVRRT 525 (760)
Q Consensus 448 GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~--~~~~~D~~al~~~ 525 (760)
|++|+|++|+||+++. ++.++++|||+........... ......+...+++++...... .+...|++++...
T Consensus 128 ~i~H~dl~~~nil~~~--~~~~~l~d~~~~~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~ 201 (272)
T cd06629 128 GILHRDLKADNLLVDA--DGICKISDFGISKKSDDIYDND----QNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCV 201 (272)
T ss_pred CeeecCCChhhEEEcC--CCeEEEeecccccccccccccc----ccccccCCccccCHHHhccccCCCCccchhHHHHHH
Confidence 9999999999999985 8899999999987654321110 001122344556666655433 4667899999877
Q ss_pred HHHHHH
Q 004334 526 AQFFLN 531 (760)
Q Consensus 526 ~~~~l~ 531 (760)
+.+++.
T Consensus 202 l~~l~~ 207 (272)
T cd06629 202 VLEMFA 207 (272)
T ss_pred HHHHHh
Confidence 766543
No 111
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.46 E-value=9.7e-13 Score=145.81 Aligned_cols=86 Identities=15% Similarity=0.062 Sum_probs=63.7
Q ss_pred HHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004334 439 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 518 (760)
Q Consensus 439 ~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D 518 (760)
..+..+|..|++|+|+||.||++++ ++.++|+|||++..+....... ..+.......+++++....+..+...|
T Consensus 225 ~~l~~lH~~~ivH~Dlkp~Nill~~--~~~~kl~DfG~a~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~sD 298 (375)
T cd05104 225 KGMSFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIRNDSNYV----VKGNARLPVKWMAPESIFNCVYTFESD 298 (375)
T ss_pred HHHHHHHHCCeeccCCchhhEEEEC--CCcEEEecCccceeccCccccc----ccCCCCCCcceeChhHhcCCCCCCCCC
Confidence 3477899999999999999999985 7889999999998775432211 011111234577788877777788899
Q ss_pred hHHHHHHHHHHH
Q 004334 519 TTAVRRTAQFFL 530 (760)
Q Consensus 519 ~~al~~~~~~~l 530 (760)
++++.-.+.+++
T Consensus 299 i~slG~~l~ell 310 (375)
T cd05104 299 VWSYGILLWEIF 310 (375)
T ss_pred HHHHHHHHHHHH
Confidence 999988776655
No 112
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.45 E-value=1.4e-13 Score=147.70 Aligned_cols=193 Identities=19% Similarity=0.192 Sum_probs=119.4
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.+|||.|++|.|+.|.. +|+.||||-... .++. .-..+...+|.
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~------------------~F~~----------------~~~akRtlREl 72 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILN------------------PFEN----------------QIDAKRTLREL 72 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhh------------------hhhc----------------hHHHHHHHHHH
Confidence 47999999999999999 699999994221 1100 01122345677
Q ss_pred HHHHHHHH-hcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHHHHHHHHHHHhCCccccC
Q 004334 376 ANAELFAS-NFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVESYLEQILSHGFFHAD 453 (760)
Q Consensus 376 ~nl~~f~~-~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~lv~~~L~qI~~~GffHaD 453 (760)
+-+++|++ |.-....|..|... +--...++|+|++ +..|.++....+ ...+..+..-..+-..++.+|..|++|+|
T Consensus 73 klLr~~~HeNIi~l~di~~p~~~-~~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRD 150 (359)
T KOG0660|consen 73 KLLRHLRHENIIGLLDIFRPPSR-DKFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRD 150 (359)
T ss_pred HHHHHhcCCCcceEEeecccccc-cccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccc
Confidence 77777742 22222233344222 1224579999999 456666554332 21122222222222336778999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHH-HHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL-LEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNS 532 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l-~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~~ 532 (760)
+||+|++++. +..++++|||+++.+++.....+ .+.+ .. -+....+.++.+.-.+...|+++++=++.+|+..
T Consensus 151 LKPsNll~n~--~c~lKI~DFGLAR~~~~~~~~~~mTeYV---aT-RWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~g 224 (359)
T KOG0660|consen 151 LKPSNLLLNA--DCDLKICDFGLARYLDKFFEDGFMTEYV---AT-RWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTG 224 (359)
T ss_pred cchhheeecc--CCCEEeccccceeeccccCcccchhcce---ee-eeecCHHHHhccccccchhhhhhhhHHHHHHHcC
Confidence 9999999986 78999999999999975322221 1111 11 2233344555666667889999999877777643
No 113
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.45 E-value=3.3e-13 Score=145.37 Aligned_cols=182 Identities=15% Similarity=0.179 Sum_probs=118.5
Q ss_pred cccccccccEEEEEEE-----CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-----~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~ 373 (760)
+.||.|++|.||+++. +|+.||||+.+..... ..-...+.+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~----------------------------------~~~~~~~~~ 47 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK----------------------------------VRDRVRTKM 47 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh----------------------------------hhhHHHHHH
Confidence 4689999999999875 4799999987541100 000012234
Q ss_pred HHHHHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCc
Q 004334 374 EAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 449 (760)
Q Consensus 374 EA~nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~Gf 449 (760)
|.+.+.++ ++++ |++++. ......++||||++|++|.+.... ...++...+...+ +-..+..+|..|+
T Consensus 48 E~~~l~~l-----~h~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i 119 (318)
T cd05582 48 ERDILAEV-----NHPF--IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLHSLGI 119 (318)
T ss_pred HHHHHHhC-----CCCC--cccEEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 55555544 2222 223322 334567999999999999876532 1223333332222 2234788999999
Q ss_pred cccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004334 450 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 450 fHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~ 529 (760)
+|+|++|.||+++. ++.++|+|||++........... ...+...+++++.......+...|++++...+.++
T Consensus 120 ~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~~~~~~~~~~------~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el 191 (318)
T cd05582 120 IYRDLKPENILLDE--EGHIKLTDFGLSKESIDHEKKAY------SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM 191 (318)
T ss_pred ecCCCCHHHeEECC--CCcEEEeeccCCcccCCCCCcee------cccCChhhcCHHHHcCCCCCCccceeccceEeeee
Confidence 99999999999985 78999999999876644321111 12356778888887765567788999988766555
Q ss_pred H
Q 004334 530 L 530 (760)
Q Consensus 530 l 530 (760)
+
T Consensus 192 ~ 192 (318)
T cd05582 192 L 192 (318)
T ss_pred c
Confidence 4
No 114
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.45 E-value=5.9e-13 Score=160.71 Aligned_cols=193 Identities=19% Similarity=0.134 Sum_probs=124.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||+.+...... ......+.+|++
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~---------------------------------e~~~~rflrEi~ 54 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSEN---------------------------------PLLKKRFLREAK 54 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccccC---------------------------------HHHHHHHHHHHH
Confidence 6799999999999998 58999999876532211 011223445665
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh--h--------cCCCHHHHHHH--HHHHHHHHH
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD--E--------LGVDRKRLGRY--AVESYLEQI 444 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~--~--------~g~d~~~la~~--lv~~~L~qI 444 (760)
.+.++ .+..-+.+..++ ......+++|||++|++|.++.... . ...+...+... .+...+..+
T Consensus 55 ILs~L----~HPNIVkl~~v~-~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yL 129 (932)
T PRK13184 55 IAADL----IHPGIVPVYSIC-SDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYV 129 (932)
T ss_pred HHHhC----CCcCcCeEEEEE-eeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHH
Confidence 55554 222223332222 2345679999999999998865321 0 01111122211 122347889
Q ss_pred HhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHH-----------HHH-HHHHhhcCHHHHHHHHHHcCC
Q 004334 445 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL-----------LEA-FYGIYEKDADKVLQAMVQMGV 512 (760)
Q Consensus 445 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l-----------~~l-~~al~~~D~~~v~~~l~~lG~ 512 (760)
|..|++|+|+||+||+++. +|.++++|||++..+........ ... ..+-..+++.+++++...-+.
T Consensus 130 Hs~GIIHRDLKPeNILLd~--dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~ 207 (932)
T PRK13184 130 HSKGVLHRDLKPDNILLGL--FGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVP 207 (932)
T ss_pred HHCCccccCCchheEEEcC--CCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCC
Confidence 9999999999999999985 78999999999987732111000 000 001123677888898887666
Q ss_pred CCCCCChHHHHHHHHHHHH
Q 004334 513 LVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 513 ~~~~~D~~al~~~~~~~l~ 531 (760)
.+...|+++++-.+.+++.
T Consensus 208 ~S~kSDIWSLGVILyELLT 226 (932)
T PRK13184 208 ASESTDIYALGVILYQMLT 226 (932)
T ss_pred CCcHhHHHHHHHHHHHHHH
Confidence 7778899999988877765
No 115
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.45 E-value=1.4e-12 Score=138.35 Aligned_cols=186 Identities=16% Similarity=0.124 Sum_probs=121.5
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|.. +|+.||||...+..... .+....+.+|..
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~~~~~~~E~~ 52 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK---------------------------------RKGESMALNEKQ 52 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccc---------------------------------hHHHHHHHHHHH
Confidence 5699999999999998 58999999866531110 011122334555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhh-hhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l-~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
.+.++ .+...+.+...+ ......+++|||++|++|.+.... ...+++...+...+ +-..+..+|..|++|+|
T Consensus 53 il~~l----~~~~i~~~~~~~-~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~d 127 (285)
T cd05630 53 ILEKV----NSRFVVSLAYAY-ETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRD 127 (285)
T ss_pred HHHhC----CCCCeeeeeEEE-ecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCC
Confidence 55544 222222222222 233567999999999999886532 22234433333322 22336789999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
++|.||+++. ++.++++|||++.......... -..+...++++++...+..+...|++++.-.+.+++.
T Consensus 128 ikp~Nil~~~--~~~~~l~Dfg~~~~~~~~~~~~-------~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~ 196 (285)
T cd05630 128 LKPENILLDD--HGHIRISDLGLAVHVPEGQTIK-------GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA 196 (285)
T ss_pred CCHHHEEECC--CCCEEEeeccceeecCCCcccc-------CCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHh
Confidence 9999999985 7899999999987665432110 0124566778888877777778899999877666543
No 116
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.45 E-value=1.2e-12 Score=136.46 Aligned_cols=185 Identities=13% Similarity=0.103 Sum_probs=120.6
Q ss_pred ccccccccEEEEEEE----CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 300 PIasaSiGQVhrA~l----~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.||.|++|.||+|++ ++..||||+..+.... .....+.+|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~-----------------------------------~~~~~~~~E~ 46 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEK-----------------------------------SVRDEMMREA 46 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccCh-----------------------------------HHHHHHHHHH
Confidence 389999999999987 2567999987663211 1112344565
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccC
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHAD 453 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI~~~GffHaD 453 (760)
..+.++ .+..-+.+..++ .....++||||++|++|.++.......++...+...+.+ ..+..+|..|++|+|
T Consensus 47 ~~l~~l----~h~~ii~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 120 (257)
T cd05115 47 EIMHQL----DNPYIVRMIGVC--EAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRD 120 (257)
T ss_pred HHHHhc----CCCCeEEEEEEE--cCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecc
Confidence 555554 233334444333 234579999999999999876433334454444433322 336778999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+||+||+++. ++.++|+|||++..+......... .........+++++....+..+...|++++.-.+.+++
T Consensus 121 lkp~nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 192 (257)
T cd05115 121 LAARNVLLVN--QHYAKISDFGLSKALGADDSYYKA---RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAF 192 (257)
T ss_pred cchheEEEcC--CCcEEeccCCccccccCCccceec---cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHh
Confidence 9999999985 789999999998866543221100 00011124566777777666777889999987766544
No 117
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.45 E-value=3e-13 Score=146.38 Aligned_cols=184 Identities=15% Similarity=0.128 Sum_probs=113.0
Q ss_pred cccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 301 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 301 IasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
||.|++|.||+|+. +|+.||||+.... .+... .+.. ....|...+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~---~~~~~-----------------------------~~~~-~~~~e~~~l 47 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKK---EIVAK-----------------------------KEVA-HTIGERNIL 47 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHH---HHhhh-----------------------------hHHH-HHHHHHHHH
Confidence 68999999999998 5899999986421 00000 0000 011122222
Q ss_pred HHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 379 ELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+. .+.+++. ++.++. +..+..++||||++|++|.+.... ...++...+...+ +-..+..+|..|++|+|+
T Consensus 48 ~~~--~~~~~p~--i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDl 122 (330)
T cd05586 48 VRT--LLDESPF--IVGLKFSFQTDSDLYLVTDYMSGGELFWHLQK-EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDL 122 (330)
T ss_pred HHh--ccCCCCc--CcceEEEEecCCeEEEEEcCCCCChHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence 211 1113333 333333 334567999999999999775432 2223433333222 223478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~~~~~~l 530 (760)
||.|||++. ++.++|+|||++......... .....++..+++++...-. ......|+++++-.+.+++
T Consensus 123 kp~Nili~~--~~~~kl~Dfg~a~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~ell 191 (330)
T cd05586 123 KPENILLDA--TGHIALCDFGLSKANLTDNKT------TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMC 191 (330)
T ss_pred CHHHeEECC--CCCEEEecCCcCcCCCCCCCC------ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEec
Confidence 999999985 789999999998764322111 0112356778888876432 2466789999887665554
No 118
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.45 E-value=2.2e-12 Score=132.75 Aligned_cols=186 Identities=12% Similarity=0.062 Sum_probs=122.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|.|++|+||+|+. +|+.|++|........ ..-...+.+|..
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----------------------------------~~~~~~~~~e~~ 51 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN----------------------------------RREREEAIDEAR 51 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC----------------------------------HHHHHHHHHHHH
Confidence 5799999999999998 6899999976431100 001112334444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~-~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
.+.++ .+..-+.+.. +.......+++|||++|.+|.++.... ....+...+...+ +...+..+|..|++|+|
T Consensus 52 ~l~~l----~h~~i~~~~~-~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~d 126 (256)
T cd08529 52 VLAKL----DSSYIIRYYE-SFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRD 126 (256)
T ss_pred HHHhc----CCCCeehhee-eeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 44444 2221122222 222234579999999999999876432 2234444433332 22346788999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
++|.||++++ ++.++|.|||++..+....... ....+...++++++...+..++..|++++...+.+++.
T Consensus 127 l~~~nili~~--~~~~~l~df~~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~ 196 (256)
T cd08529 127 IKSLNLFLDA--YDNVKIGDLGVAKLLSDNTNFA------NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCT 196 (256)
T ss_pred CCcceEEEeC--CCCEEEcccccceeccCccchh------hccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHh
Confidence 9999999986 7899999999998876542211 11234556778888877777888999999877766543
No 119
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.45 E-value=1.1e-12 Score=142.81 Aligned_cols=182 Identities=16% Similarity=0.181 Sum_probs=121.1
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|++ +|+.||+|+.+...... ....+.+|++
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~-----------------------------------~~~~~~~E~~ 55 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPA-----------------------------------IRNQIIRELQ 55 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHH-----------------------------------HHHHHHHHHH
Confidence 5799999999999999 58999999876642211 1122345666
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh-CCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS-HGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~-~GffHaD 453 (760)
.+..+. +..-+.+...+. .....+|||||++|++|.++..... ..+...+.... +-..+..+|. ++++|+|
T Consensus 56 ~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~d 129 (333)
T cd06650 56 VLHECN----SPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIMHRD 129 (333)
T ss_pred HHHHCC----CCcccceeEEEE-ECCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcCCEEecC
Confidence 665552 222233333332 3456899999999999998754221 22333222221 2233667786 5899999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+||+||+++. ++.++|+|||++..+...... ...+...++++++......+...|++++.-.+.+++.
T Consensus 130 lkp~Nili~~--~~~~kL~Dfg~~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~ 197 (333)
T cd06650 130 VKPSNILVNS--RGEIKLCDFGVSGQLIDSMAN--------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAI 197 (333)
T ss_pred CChhhEEEcC--CCCEEEeeCCcchhhhhhccc--------cCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHH
Confidence 9999999985 789999999998766432211 1235667788888776666777899999887766653
No 120
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.45 E-value=4e-13 Score=147.54 Aligned_cols=189 Identities=17% Similarity=0.210 Sum_probs=118.0
Q ss_pred hhcccC-ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHH
Q 004334 292 VFERFD-VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECA 368 (760)
Q Consensus 292 iF~~fd-~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~ 368 (760)
+...|. .+.||+|++|.||+|.. .++.||||+........ +..
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------~~~ 67 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ----------------------------------THA 67 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCc----------------------------------hhH
Confidence 334443 36899999999999998 58999999875422110 001
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceeeceeeec-----cCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHH
Q 004334 369 SVLYQEAANAELFASNFKDMDYVKVPTIFWE-----YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYL 441 (760)
Q Consensus 369 ~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e-----~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L 441 (760)
..+.+|...++.+ .+..-+.+..++.. .....++||||++|. +.+... ...+...+...+ +-..+
T Consensus 68 ~~~~~E~~~l~~l----~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~---~~~~~~~~~~~~~qi~~aL 139 (364)
T cd07875 68 KRAYRELVLMKCV----NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQ---MELDHERMSYLLYQMLCGI 139 (364)
T ss_pred HHHHHHHHHHHhc----CCCCccccceeecccccccccCeEEEEEeCCCCC-HHHHHH---hcCCHHHHHHHHHHHHHHH
Confidence 1223344444433 22222222222221 123469999999874 443322 123333322222 22347
Q ss_pred HHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHH
Q 004334 442 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTA 521 (760)
Q Consensus 442 ~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~a 521 (760)
..+|..|++|+|+||.||+++. ++.++|+|||++......... .-..+...++++++......++..|+++
T Consensus 140 ~~LH~~~ivH~Dlkp~NIll~~--~~~~kL~DfG~a~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~DiwS 210 (364)
T cd07875 140 KHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMM-------TPYVVTRYYRAPEVILGMGYKENVDIWS 210 (364)
T ss_pred HHHhhCCeecCCCCHHHEEECC--CCcEEEEeCCCccccCCCCcc-------cCCcccCCcCCHHHHhCCCCCchhhHHh
Confidence 8899999999999999999985 889999999999876543210 1113456677888777666777899999
Q ss_pred HHHHHHHHHH
Q 004334 522 VRRTAQFFLN 531 (760)
Q Consensus 522 l~~~~~~~l~ 531 (760)
++-.+.+++.
T Consensus 211 lG~il~ell~ 220 (364)
T cd07875 211 VGCIMGEMIK 220 (364)
T ss_pred HHHHHHHHHh
Confidence 9988777653
No 121
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.44 E-value=5.2e-13 Score=146.19 Aligned_cols=187 Identities=18% Similarity=0.190 Sum_probs=129.9
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+-||.|--|+||+|+. .++.||||+..- ...-++ -+.+++|..
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inL----------------------------------Ekc~~~-ld~l~kE~~ 76 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIINL----------------------------------EKCNND-LDALRKEVQ 76 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEeeh----------------------------------hhhhhh-HHHHHHHHH
Confidence 4689998899999998 699999997422 111122 234677888
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhh-hhhcCCCHHHHHHHHHH--HHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQS-LDELGVDRKRLGRYAVE--SYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~-l~~~g~d~~~la~~lv~--~~L~qI~~~GffHaD 453 (760)
+|..| ++|+|.--..-.-.....|+||-|+.|+++.++.. .-..|++...++..+-+ ..|.++|.+|.+|||
T Consensus 77 ~msl~-----~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRd 151 (516)
T KOG0582|consen 77 TMSLI-----DHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRD 151 (516)
T ss_pred Hhhhc-----CCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecc
Confidence 88877 44544322222233467799999999999999764 33456777766665433 337889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH-H-cCCCCCCCChHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV-Q-MGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~-~-lG~~~~~~D~~al~~~~~~~ 529 (760)
+|+|||||+. +|.++|.|||....+-+.-.+.-.++ ..+.+.+.+|+++++ + .--..-+.|+++|+-.+-++
T Consensus 152 vKAgnILi~~--dG~VkLadFgvsa~l~~~G~R~~~rf--~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~EL 225 (516)
T KOG0582|consen 152 VKAGNILIDS--DGTVKLADFGVSASLFDSGDRQVTRF--NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACEL 225 (516)
T ss_pred cccccEEEcC--CCcEEEcCceeeeeecccCceeeEee--ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHH
Confidence 9999999986 99999999999887755432222222 344578888888873 2 22224567888887655444
No 122
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.44 E-value=1.3e-12 Score=137.36 Aligned_cols=182 Identities=17% Similarity=0.149 Sum_probs=119.1
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
++||+|++|+||+|+. +|+.||||+....... .....+.+|..
T Consensus 10 ~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~-----------------------------------~~~~~~~~e~~ 54 (277)
T cd06640 10 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE-----------------------------------DEIEDIQQEIT 54 (277)
T ss_pred hhcccCCCeEEEEEEEccCCEEEEEEEEeccccH-----------------------------------HHHHHHHHHHH
Confidence 5799999999999998 5899999986431100 00112334444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI~~~GffHaDp 454 (760)
.+.++ .+...+.+...+ ......++||||++|++|.++... ...+...+.....+ ..+..+|..|++|+|+
T Consensus 55 ~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl 127 (277)
T cd06640 55 VLSQC----DSPYVTKYYGSY-LKGTKLWIIMEYLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSEKKIHRDI 127 (277)
T ss_pred HHHhC----CCCCEeeEEEEE-EECCEEEEEEecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCC
Confidence 44443 222222333333 234568999999999999886542 23343333333222 3367889999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|+||+++. ++.++++|||++..+....... ....++..+++++....+..+...|++++...+.+++
T Consensus 128 ~p~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~ 195 (277)
T cd06640 128 KAANVLLSE--QGDVKLADFGVAGQLTDTQIKR------NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELA 195 (277)
T ss_pred ChhhEEEcC--CCCEEEcccccceeccCCcccc------ccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHH
Confidence 999999985 7899999999998876543211 0112344566777766666677889999987776654
No 123
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.44 E-value=1.7e-12 Score=133.04 Aligned_cols=184 Identities=16% Similarity=0.129 Sum_probs=122.4
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
++||+|++|.||+|+. +|+.|+||.....-.. +.....+.+|++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------------------------~~~~~~~~~e~~ 51 (254)
T cd06627 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK----------------------------------EEALKSIMQEID 51 (254)
T ss_pred eEEcccCCeEEEEEEEcCCCcEEEEEEecccccC----------------------------------HHHHHHHHHHHH
Confidence 6899999999999998 5899999987653110 011123445555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+.++. ++++.-+.-+.......+++|||++|.+|.++.... ...+...+...+ +-..+..+|..|++|+|+
T Consensus 52 ~l~~l~-----~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 125 (254)
T cd06627 52 LLKNLK-----HPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDI 125 (254)
T ss_pred HHHhCC-----CCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCC
Confidence 555542 222221111223345679999999999998865422 223333333322 223367899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|+||+++. ++.++|+|||++..+...... .....++..+++++...........|++++...+.+++
T Consensus 126 ~p~ni~i~~--~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~ 193 (254)
T cd06627 126 KAANILTTK--DGVVKLADFGVATKLNDVSKD------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELL 193 (254)
T ss_pred CHHHEEECC--CCCEEEeccccceecCCCccc------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHH
Confidence 999999985 789999999999988765432 11223566677777776665667789999887766554
No 124
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.44 E-value=6.9e-13 Score=137.35 Aligned_cols=186 Identities=17% Similarity=0.209 Sum_probs=117.6
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.+-+|.|.+|.||+|+. +|+.||||-.+.+-.+ +.+..+..+|.
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k----------------------------------dGi~~talREI 52 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK----------------------------------DGINRTALREI 52 (318)
T ss_pred hhhhcCcceEEEEEEEecCCCcEEEEEEeeccccc----------------------------------cCccHHHHHHH
Confidence 35799999999999999 6999999987775211 11122334455
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHH--HHHHHHhCCccccC
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQILSHGFFHAD 453 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~--~L~qI~~~GffHaD 453 (760)
+.++.+. +..-+..-.+|+ +.+...||.||++- +|..+......-+.+..+-..+... -+..+|.+.++|||
T Consensus 53 K~Lqel~----h~nIi~LiD~F~-~~~~l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRD 126 (318)
T KOG0659|consen 53 KLLQELK----HPNIIELIDVFP-HKSNLSLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRD 126 (318)
T ss_pred HHHHHcc----Ccchhhhhhhcc-CCCceEEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence 5555442 222233344443 34567899999984 4444444333334455544333322 26678999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+||.|+|+++ +|.+++.|||+++.+.+..+..--+ ++.+ ....-+.+...-.....+|+++++=++.+++
T Consensus 127 lKPnNLLis~--~g~lKiADFGLAr~f~~p~~~~~~~----V~TR-WYRAPELLfGsr~Yg~~VDmWavGCI~AELl 196 (318)
T KOG0659|consen 127 LKPNNLLISS--DGQLKIADFGLARFFGSPNRIQTHQ----VVTR-WYRAPELLFGSRQYGTGVDMWAVGCIFAELL 196 (318)
T ss_pred CCccceEEcC--CCcEEeecccchhccCCCCcccccc----eeee-eccChHHhccchhcCCcchhhhHHHHHHHHH
Confidence 9999999986 9999999999999988766543322 1111 1222233333333456778998886665554
No 125
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.44 E-value=1.8e-12 Score=137.26 Aligned_cols=183 Identities=18% Similarity=0.129 Sum_probs=121.9
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|.. +|+.||||+.++.-.. ..+....+.+|++
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~---------------------------------~~~~~~~~~~e~~ 53 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIV---------------------------------KLKQVEHVLNEKR 53 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhh---------------------------------hhhHHHHHHHHHH
Confidence 5799999999999998 5899999987642000 0011123445666
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+.++. +..-+.+...+ ......+++|||++|++|.++.... ..++...+...+ +-..+..+|..|++|+|+
T Consensus 54 ~l~~l~----h~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl 127 (290)
T cd05580 54 ILQSIR----HPFLVNLYGSF-QDDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLDIVYRDL 127 (290)
T ss_pred HHHhCC----CCCccceeeEE-EcCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCC
Confidence 665552 22223333333 2345679999999999998865332 223433333222 223467899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
||.||+++. ++.++|+|||++..+..... ...+...+++++...-+......|++++...+.+++.
T Consensus 128 ~p~nili~~--~~~~kl~dfg~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~ 193 (290)
T cd05580 128 KPENLLLDS--DGYIKITDFGFAKRVKGRTY---------TLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLA 193 (290)
T ss_pred CHHHEEECC--CCCEEEeeCCCccccCCCCC---------CCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHh
Confidence 999999986 78999999999988765411 1234556777777665556677899999877766553
No 126
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.44 E-value=1.7e-13 Score=145.42 Aligned_cols=186 Identities=16% Similarity=0.129 Sum_probs=122.9
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+-|+.|+||.||||+. +++-||+|-.+++-++. + |.-.-.+|..
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~-----------------------G-----------FPItsLREIn 127 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE-----------------------G-----------FPITSLREIN 127 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeecccccccC-----------------------C-----------CcchhHHHHH
Confidence 5799999999999999 58999999887753211 1 1111234555
Q ss_pred HHHHHHHhcCCCCceeeceeeecc-CCCeEEEEeecCCCchhhhhhhhhcCCCHHH---HHHHHHHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~-st~~vLVME~ieG~~L~d~~~l~~~g~d~~~---la~~lv~~~L~qI~~~GffHa 452 (760)
.+.+++ |.+-|.+-+|+..- -+..+||||||+- +|..+.......+...+ +...++ ..++.+|.+.++||
T Consensus 128 iLl~~~----H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL-~glk~lH~~wilHR 201 (419)
T KOG0663|consen 128 ILLKAR----HPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLL-RGLKHLHDNWILHR 201 (419)
T ss_pred HHHhcC----CCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHH-HHHHHHhhceeEec
Confidence 555553 44556677766433 2567999999984 34443322222233332 222222 34788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
|+||.|+|+++ .|.++++|||+++.+... ...+..++..+..+-++ .++..-..+...|++++.=++.+++.
T Consensus 202 DLK~SNLLm~~--~G~lKiaDFGLAR~ygsp-~k~~T~lVVTLWYRaPE----LLLG~~tyst~iDMWSvGCI~aE~l~ 273 (419)
T KOG0663|consen 202 DLKTSNLLLSH--KGILKIADFGLAREYGSP-LKPYTPLVVTLWYRAPE----LLLGAKTYSTAVDMWSVGCIFAELLT 273 (419)
T ss_pred ccchhheeecc--CCcEEecccchhhhhcCC-cccCcceEEEeeecCHH----HhcCCcccCcchhhhhHHHHHHHHHh
Confidence 99999999986 899999999999999775 23344444444444443 44444455677899999877666653
No 127
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.44 E-value=5.4e-13 Score=142.38 Aligned_cols=184 Identities=18% Similarity=0.127 Sum_probs=114.5
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||+.+...... ......+|+.
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----------------------------------~~~~~~~E~~ 55 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG-----------------------------------TPFTAIREAS 55 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEEEEEEeccccccc-----------------------------------cchhHHHHHH
Confidence 6899999999999998 58999999875321100 0001234555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+..+ .+..-+.+..++ ......++||||++|. +.+.........+...+...+ +-..+..+|..|++|+|+
T Consensus 56 ~l~~l----~h~niv~~~~~~-~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dl 129 (303)
T cd07869 56 LLKGL----KHANIVLLHDII-HTKETLTLVFEYVHTD-LCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDL 129 (303)
T ss_pred HHhhC----CCCCcCeEEEEE-ecCCeEEEEEECCCcC-HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 44444 222223333333 3345679999999864 444332222334444443332 223478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~l~ 531 (760)
||+||++++ ++.++|+|||++...+...... .-..++..++++++..- .......|+++++-.+.+++.
T Consensus 130 kp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~ 199 (303)
T cd07869 130 KPQNLLISD--TGELKLADFGLARAKSVPSHTY------SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQ 199 (303)
T ss_pred CHHHEEECC--CCCEEECCCCcceeccCCCccC------CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHh
Confidence 999999985 7899999999987654321100 00123455677776542 334556799999887766653
No 128
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.44 E-value=5.7e-13 Score=153.49 Aligned_cols=189 Identities=15% Similarity=0.097 Sum_probs=119.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||+....-... .+ ...+.+|..
T Consensus 38 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~--~~--------------------------------~~~~~~Ei~ 83 (496)
T PTZ00283 38 RVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSE--AD--------------------------------KNRAQAEVC 83 (496)
T ss_pred EEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCH--HH--------------------------------HHHHHHHHH
Confidence 6799999999999998 69999999875531110 00 001122332
Q ss_pred HHHHHHHhcCCCCceeeceeeec-------cCCCeEEEEeecCCCchhhhhhhhh---cCCCHHHHHHHH--HHHHHHHH
Q 004334 377 NAELFASNFKDMDYVKVPTIFWE-------YTTPQILTMEYVPGIKINRIQSLDE---LGVDRKRLGRYA--VESYLEQI 444 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e-------~st~~vLVME~ieG~~L~d~~~l~~---~g~d~~~la~~l--v~~~L~qI 444 (760)
.+..+ .+...+..-..+.. .....++||||++|++|.+...... ..+....+...+ +-..++.+
T Consensus 84 ~l~~~----~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~l 159 (496)
T PTZ00283 84 CLLNC----DFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHV 159 (496)
T ss_pred HHhcC----CCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 22221 11111211111110 0112579999999999988653211 123333333222 22347889
Q ss_pred HhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004334 445 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 524 (760)
Q Consensus 445 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~ 524 (760)
|..|++|+|+||.||+++. ++.++|+|||++..+......... ....+++.++++++...+..+...|++++..
T Consensus 160 H~~~IiHrDLKP~NILl~~--~~~vkL~DFGls~~~~~~~~~~~~----~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGv 233 (496)
T PTZ00283 160 HSKHMIHRDIKSANILLCS--NGLVKLGDFGFSKMYAATVSDDVG----RTFCGTPYYVAPEIWRRKPYSKKADMFSLGV 233 (496)
T ss_pred HhCCEecCCCCHHHEEEeC--CCCEEEEecccCeecccccccccc----ccccCCcceeCHHHhCCCCCCcHHHHHHHHH
Confidence 9999999999999999986 789999999998876543221111 1123567788999888777778899999998
Q ss_pred HHHHHHH
Q 004334 525 TAQFFLN 531 (760)
Q Consensus 525 ~~~~~l~ 531 (760)
.+.+++.
T Consensus 234 ilyeLlt 240 (496)
T PTZ00283 234 LLYELLT 240 (496)
T ss_pred HHHHHHH
Confidence 8777654
No 129
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.44 E-value=1.6e-12 Score=136.11 Aligned_cols=185 Identities=19% Similarity=0.193 Sum_probs=121.0
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|.|++|+||+|+. +|+.|+||+.+...... ....+.+|..
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~-----------------------------------~~~~~~~e~~ 51 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDD-----------------------------------DVSDIQREVA 51 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCch-----------------------------------hHHHHHHHHH
Confidence 5799999999999998 68999999876532211 0012234555
Q ss_pred HHHHHHHhcCCCCce-eeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V-~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHaD 453 (760)
.+.++.. ..++++ .+... ....+..+++|||++|.+|.++.... .++...+... .+...+..+|..|++|+|
T Consensus 52 ~l~~l~~--~~~~~vi~~~~~-~~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~i~H~d 126 (277)
T cd06917 52 LLSQLRQ--SQPPNITKYYGS-YLKGPRLWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVGVIHRD 126 (277)
T ss_pred HHHHhcc--CCCCCeeeEeee-eeeCCEEEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 5555532 122332 22222 23345679999999999999875432 2333322222 233446789999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC-CCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV-LVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~-~~~~~D~~al~~~~~~~l~ 531 (760)
++|.||++++ ++.++++|||.+..+........ ...+...+++++....+. .+...|++++...+.+++.
T Consensus 127 l~p~ni~i~~--~~~~~l~dfg~~~~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~ 197 (277)
T cd06917 127 IKAANILVTN--TGNVKLCDFGVAALLNQNSSKRS------TFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMAT 197 (277)
T ss_pred cCHHHEEEcC--CCCEEEccCCceeecCCCccccc------cccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHh
Confidence 9999999986 78999999999988765432111 112444566677665443 3567899999887776654
No 130
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.44 E-value=2.4e-13 Score=153.32 Aligned_cols=193 Identities=17% Similarity=0.138 Sum_probs=128.7
Q ss_pred hhhhhcccC-ccccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHH
Q 004334 289 LDDVFERFD-VEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDEC 367 (760)
Q Consensus 289 ~~~iF~~fd-~~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~ 367 (760)
|+..++++. .++||+||||.||||++.|. ||||+..-.-- -++-
T Consensus 387 WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd-VAVK~Lnv~~p----------------------------------t~~q 431 (678)
T KOG0193|consen 387 WEIPPEEVLLGERIGSGSFGTVYRGRWHGD-VAVKLLNVDDP----------------------------------TPEQ 431 (678)
T ss_pred cccCHHHhhccceeccccccceeecccccc-eEEEEEecCCC----------------------------------CHHH
Confidence 444444443 36899999999999999885 99998643210 1222
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCceeeceeeeccCC--CeEEEEeecCCCchhhhhhhhhcCCCHHH---HHHHHHHHHHH
Q 004334 368 ASVLYQEAANAELFASNFKDMDYVKVPTIFWEYTT--PQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLE 442 (760)
Q Consensus 368 ~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st--~~vLVME~ieG~~L~d~~~l~~~g~d~~~---la~~lv~~~L~ 442 (760)
.+.+.+|..++++-|+ .+-+ .+..+++ ...+|+.||+|-+|..........++... ||+. +...+.
T Consensus 432 lqaFKnEVa~lkkTRH----~NIl----LFMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQ-iaqGM~ 502 (678)
T KOG0193|consen 432 LQAFKNEVAVLKKTRH----ENIL----LFMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQ-IAQGMD 502 (678)
T ss_pred HHHHHHHHHHHhhcch----hhhe----eeehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHHHHHHH-HHHhhh
Confidence 3345677666665543 1111 1233433 34899999999999987665554455433 3333 334478
Q ss_pred HHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC---CCCCCh
Q 004334 443 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL---VPTGDT 519 (760)
Q Consensus 443 qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~---~~~~D~ 519 (760)
++|..+|+|+|+|..|||+.+ ++++++.|||++..-+.-... .=+..-.+..-+|+++++.|+-. ++..|+
T Consensus 503 YLHAK~IIHrDLKSnNIFl~~--~~kVkIgDFGLatvk~~w~g~----~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDV 576 (678)
T KOG0193|consen 503 YLHAKNIIHRDLKSNNIFLHE--DLKVKIGDFGLATVKTRWSGE----QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDV 576 (678)
T ss_pred hhhhhhhhhhhccccceEEcc--CCcEEEecccceeeeeeeccc----cccCCCccchhhhcHHHHhhcccCCCCcccch
Confidence 899999999999999999985 799999999998654322111 11122345567889999988754 346799
Q ss_pred HHHHHHHHHHHH
Q 004334 520 TAVRRTAQFFLN 531 (760)
Q Consensus 520 ~al~~~~~~~l~ 531 (760)
++|+-..++++.
T Consensus 577 YaFGiV~YELlt 588 (678)
T KOG0193|consen 577 YAFGIVWYELLT 588 (678)
T ss_pred hhhhHHHHHHHh
Confidence 999988877764
No 131
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.44 E-value=1.3e-12 Score=135.34 Aligned_cols=183 Identities=19% Similarity=0.229 Sum_probs=121.5
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|.. +|+.|++|+...+.... ....+.+|..
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------~~~~~~~e~~ 51 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEA-----------------------------------IQKQILRELD 51 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChH-----------------------------------HHHHHHHHHH
Confidence 5799999999999999 48999999876643211 1112233444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHh-CCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILS-HGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~-~GffHaD 453 (760)
.+.++. +..-+.+...+ ......+++|||++|.+|.++........+...+...+. -..+..+|. .|++|+|
T Consensus 52 ~l~~~~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~d 126 (265)
T cd06605 52 ILHKCN----SPYIVGFYGAF-YNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRD 126 (265)
T ss_pred HHHHCC----CCchhhhheee-ecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCC
Confidence 444331 11112222222 223567999999999999987643323334333333222 223678899 9999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
++|+||++++ ++.++|+|||.+..+....... ..++..++.++...........|++++.-.+.+++.
T Consensus 127 l~~~ni~~~~--~~~~~l~d~g~~~~~~~~~~~~--------~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~ 194 (265)
T cd06605 127 VKPSNILVNS--RGQIKLCDFGVSGQLVNSLAKT--------FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELAT 194 (265)
T ss_pred CCHHHEEECC--CCCEEEeecccchhhHHHHhhc--------ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHh
Confidence 9999999986 7899999999987775443221 335566778888776666777899999877766553
No 132
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.43 E-value=1.3e-12 Score=136.57 Aligned_cols=184 Identities=12% Similarity=0.090 Sum_probs=116.6
Q ss_pred cccccccccEEEEEEE-----CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-----~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~ 373 (760)
+.||.|+||+||+|++ .+..||+|+.+.+.... ....+.+
T Consensus 11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~-----------------------------------~~~~~~~ 55 (266)
T cd05064 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDK-----------------------------------QRRGFLA 55 (266)
T ss_pred eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHH-----------------------------------HHHHHHH
Confidence 5799999999999986 25789999876542211 0112334
Q ss_pred HHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccc
Q 004334 374 EAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFH 451 (760)
Q Consensus 374 EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffH 451 (760)
|...+.++ .+..-+.+...+ ......++||||++|++|.++.......+....+.... +-..+..+|..|++|
T Consensus 56 e~~~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH 130 (266)
T cd05064 56 EALTLGQF----DHSNIVRLEGVI-TRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVH 130 (266)
T ss_pred HHHHHhcC----CCCCcCeEEEEE-ecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 44444433 222223333322 23456799999999999998764332233433332222 223468899999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~ 529 (760)
+|++|.||+++. ++.+++.|||........... . . ........+++++....+..+...|++++.-.+.++
T Consensus 131 ~dikp~nili~~--~~~~~l~dfg~~~~~~~~~~~--~-~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 201 (266)
T cd05064 131 KGLAAHKVLVNS--DLVCKISGFRRLQEDKSEAIY--T-T--MSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEV 201 (266)
T ss_pred ccccHhhEEEcC--CCcEEECCCcccccccccchh--c-c--cCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHH
Confidence 999999999985 789999999987654322110 0 0 001112345677777767777888999998776554
No 133
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.43 E-value=1.6e-12 Score=135.19 Aligned_cols=197 Identities=17% Similarity=0.107 Sum_probs=122.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..||.|++|+||+|.. +|+.||+|+....-...- ......+....+.+|+.
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~---------------------------~~~~~~~~~~~~~~e~~ 58 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSAS---------------------------SKDRKRSMLDALAREIA 58 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccc---------------------------hhHHHHHHHHHHHHHHH
Confidence 5799999999999998 589999998755311100 00111223334556666
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHH---HHHHHHHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~---la~~lv~~~L~qI~~~GffHaD 453 (760)
.+.++. +..-+.+... .......+++|||++|.+|.++.... ...+... ++..++ ..+..+|..|++|+|
T Consensus 59 ~l~~l~----h~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~-~~l~~lH~~~ivH~d 131 (267)
T cd06628 59 LLKELQ----HENIVQYLGS-SLDADHLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQIL-KGLNYLHNRGIIHRD 131 (267)
T ss_pred HHHhcC----CCCeeeEEEE-EEeCCccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHH-HHHHHHHhcCccccc
Confidence 666552 2222222222 23345679999999999998875322 1223222 222222 346788999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
++|.||++++ ++.++|+|||++..+.......-.........+...+++++....+..++..|++++...+.+++.
T Consensus 132 i~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~ 207 (267)
T cd06628 132 IKGANILVDN--KGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLT 207 (267)
T ss_pred CCHHHEEEcC--CCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhh
Confidence 9999999985 889999999999877532110000000001123445667777666666777899999877766653
No 134
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.43 E-value=1.1e-12 Score=140.73 Aligned_cols=184 Identities=17% Similarity=0.257 Sum_probs=114.3
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.+|.|++|.||+|+. +|+.||+|.++-.-++. . .| ....+|..-
T Consensus 18 klGeGtyg~Vykar~~~~g~~VALKkirl~~~~E----------------G-~P-----------------~taiREisl 63 (323)
T KOG0594|consen 18 KLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEE----------------G-VP-----------------STAIREISL 63 (323)
T ss_pred HhCCCCceEEEEEEEecCCCEEEEEEEecccccc----------------C-CC-----------------chhhHHHHH
Confidence 499999999999998 69999999887642210 0 01 012234444
Q ss_pred HHHHHHhcCCCC-ceeeceeeeccCC-----CeEEEEeecCCCchhhhhhhhh---cCCCHHHHHHHHHH---HHHHHHH
Q 004334 378 AELFASNFKDMD-YVKVPTIFWEYTT-----PQILTMEYVPGIKINRIQSLDE---LGVDRKRLGRYAVE---SYLEQIL 445 (760)
Q Consensus 378 l~~f~~~~~~~~-~V~VP~vy~e~st-----~~vLVME~ieG~~L~d~~~l~~---~g~d~~~la~~lv~---~~L~qI~ 445 (760)
++++. +.+ -+.+-.++..... ..+||+||++- +|.++..... .|.+.. +....+. ..+..+|
T Consensus 64 lk~L~----~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~-~ik~~m~Qll~gl~~~H 137 (323)
T KOG0594|consen 64 LKRLS----HANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPR-LIKSFMRQLLRGLAFLH 137 (323)
T ss_pred HHHhC----CCcceEEEEeeeeecccccccceEEEEEEeecc-cHHHHHHhccccccCCCHH-HHHHHHHHHHHHHHHHH
Confidence 44442 222 4555555544442 66899999974 4555443222 355542 2222222 2256689
Q ss_pred hCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHH
Q 004334 446 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 525 (760)
Q Consensus 446 ~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~ 525 (760)
.+|++|||+||.||+|++ +|.++|+|||+++.++-..+. +..-+..+..+-++- ++.--..++..|++++.-+
T Consensus 138 ~~~IlHRDLKPQNlLi~~--~G~lKlaDFGlAra~~ip~~~-yt~evvTlWYRaPEv----LlGs~~Ys~~vDiWs~GcI 210 (323)
T KOG0594|consen 138 SHGILHRDLKPQNLLISS--SGVLKLADFGLARAFSIPMRT-YTPEVVTLWYRAPEV----LLGSTSYSTSVDIWSLGCI 210 (323)
T ss_pred hCCeecccCCcceEEECC--CCcEeeeccchHHHhcCCccc-ccccEEEeeccCHHH----hcCCCcCCCCcchHhHHHH
Confidence 999999999999999996 899999999999977644332 222222222233332 3333346778899999876
Q ss_pred HHHHH
Q 004334 526 AQFFL 530 (760)
Q Consensus 526 ~~~~l 530 (760)
+.+++
T Consensus 211 faEm~ 215 (323)
T KOG0594|consen 211 FAEMF 215 (323)
T ss_pred HHHHH
Confidence 65554
No 135
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.43 E-value=1.2e-12 Score=135.91 Aligned_cols=184 Identities=15% Similarity=0.144 Sum_probs=119.5
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
+.||.|++|.||+|.. +++.||||..+++-.. ...+.+|...
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~-------------------------------------~~~~~~e~~~ 54 (261)
T cd05068 12 RKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD-------------------------------------PKDFLAEAQI 54 (261)
T ss_pred EEecccCCccEEEEEecCCeEEEEEeeCCCccc-------------------------------------HHHHHHHHHH
Confidence 6899999999999998 5788999987763110 0112345555
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHHHH--HHHHHHHhCCccccCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVE--SYLEQILSHGFFHADP 454 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~lv~--~~L~qI~~~GffHaDp 454 (760)
+.++. +..-+.+.. +.......+++|||++|.+|.++..... ...+...+...+.+ ..+..+|..|++|+|+
T Consensus 55 l~~l~----h~~i~~~~~-~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 129 (261)
T cd05068 55 MKKLR----HPKLIQLYA-VCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDL 129 (261)
T ss_pred HHHCC----CCCccceeE-EEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence 55542 211122222 2234456799999999999998754322 22344444333322 3367889999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
||+||++++ ++.++|+|||++..+......... + ......+++++....+..+...|++++.-.+.+++.
T Consensus 130 ~p~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~----~-~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t 199 (261)
T cd05068 130 AARNVLVGE--NNICKVADFGLARVIKEDIYEARE----G-AKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVT 199 (261)
T ss_pred CcceEEEcC--CCCEEECCcceEEEccCCcccccC----C-CcCceeccCccccccCCCCchhhHHHHHHHHHHHHh
Confidence 999999986 789999999999887633211000 0 001124566766666666778899999877766543
No 136
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.43 E-value=1.7e-12 Score=133.61 Aligned_cols=187 Identities=20% Similarity=0.195 Sum_probs=120.3
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
+.||.|++|.||+|.+ +|+.|++|+.+..... +....+.+|...
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~-----------------------------------~~~~~~~~e~~~ 45 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP-----------------------------------DLKRKFLQEAEI 45 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH-----------------------------------HHHHHHHHHHHH
Confidence 3689999999999999 5899999976542111 011123445444
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPH 455 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI~~~GffHaDpH 455 (760)
+.++ +++++.-...+.......+++|||++|.+|.++........+...+...... ..+..+|..|++|+|++
T Consensus 46 l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~ 120 (251)
T cd05041 46 LKQY-----DHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLA 120 (251)
T ss_pred HHhC-----CCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcC
Confidence 4443 2333322222333446689999999999998876433333444443333222 34678999999999999
Q ss_pred CCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 456 PGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 456 PGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
|.||+++. ++.++|+|||++......... .. .........+++++....+..+...|++++...+.+++.
T Consensus 121 p~nili~~--~~~~~l~d~g~~~~~~~~~~~-~~---~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t 190 (251)
T cd05041 121 ARNCLVGE--NNVLKISDFGMSREEEGGIYT-VS---DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFS 190 (251)
T ss_pred cceEEEcC--CCcEEEeeccccccccCCcce-ec---cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHh
Confidence 99999985 789999999998866532110 00 000011234566777666777788899999887776653
No 137
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.43 E-value=8e-13 Score=142.54 Aligned_cols=188 Identities=18% Similarity=0.201 Sum_probs=117.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|+. +|+.||||+.+...... .-...+.+|++
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------~~~~~~~~E~~ 51 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV----------------------------------SDATRILREIK 51 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhccc----------------------------------hhHHHHHHHHH
Confidence 5799999999999998 58999999865421100 00112345666
Q ss_pred HHHHHHHhcCCCCceeeceeeeccC----CCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYT----TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFF 450 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~s----t~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~Gff 450 (760)
.+.++. +..-+.+..++.... ...++||||++| .|.++... ...+....+...+ +-..+..+|..|++
T Consensus 52 ~l~~l~----hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 125 (338)
T cd07859 52 LLRLLR----HPDIVEIKHIMLPPSRREFKDIYVVFELMES-DLHQVIKA-NDDLTPEHHQFFLYQLLRALKYIHTANVF 125 (338)
T ss_pred HHHhCC----CCCEeeecceEeccCCCCCceEEEEEecCCC-CHHHHHHh-cccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 665552 222233333332211 236999999975 66665421 1123333322222 22347889999999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc--CCCCCCCChHHHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM--GVLVPTGDTTAVRRTAQF 528 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l--G~~~~~~D~~al~~~~~~ 528 (760)
|+|++|.||+++. ++.++|+|||++.......... ....-..++..++++++... +..++..|+++++-.+.+
T Consensus 126 H~dlkp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~e 200 (338)
T cd07859 126 HRDLKPKNILANA--DCKLKICDFGLARVAFNDTPTA---IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAE 200 (338)
T ss_pred cCCCCHHHeEECC--CCcEEEccCccccccccccCcc---ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHH
Confidence 9999999999985 8899999999987653321111 00111234566777887653 455677899999988777
Q ss_pred HHH
Q 004334 529 FLN 531 (760)
Q Consensus 529 ~l~ 531 (760)
++.
T Consensus 201 l~t 203 (338)
T cd07859 201 VLT 203 (338)
T ss_pred HHc
Confidence 654
No 138
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.42 E-value=2.9e-12 Score=135.50 Aligned_cols=184 Identities=16% Similarity=0.163 Sum_probs=114.4
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.||+|++|.||+|.. +|+.||||+.++.....-.. .....+|...
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~---------------------------------~~~~~~~~~~ 47 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG---------------------------------ETLALNERIM 47 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchH---------------------------------HHHHHHHHHH
Confidence 379999999999998 58999999887632111000 0001111111
Q ss_pred HHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 378 AELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
+..+ .. .+++. ++..+. ......++||||++|++|.++.... ..+....+.... +-..+..+|..|++|+|
T Consensus 48 ~~~~-~~-~~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~ivH~d 122 (279)
T cd05633 48 LSLV-ST-GDCPF--IVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQH-GVFSEKEMRFYATEIILGLEHMHNRFVVYRD 122 (279)
T ss_pred HHHH-hh-CCCCc--EeEEEEEEecCCeEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCC
Confidence 1111 11 12233 333332 2335679999999999998765322 223333333222 22347889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~~~~~~l~ 531 (760)
++|+||+++. ++.++++|||++..++..... ...+...+++++...-+ ..+...|++++.-.+.+++.
T Consensus 123 ikp~Nil~~~--~~~~~l~dfg~~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~ 191 (279)
T cd05633 123 LKPANILLDE--HGHVRISDLGLACDFSKKKPH--------ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLR 191 (279)
T ss_pred CCHHHEEECC--CCCEEEccCCcceeccccCcc--------CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHh
Confidence 9999999985 789999999998766543211 12355667777766433 34567899999877666543
No 139
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.42 E-value=1.7e-12 Score=135.03 Aligned_cols=194 Identities=13% Similarity=0.096 Sum_probs=120.1
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
+.||.|++|+||+|.. +|+.||||..+....... ...+....+.+|+..
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~------------------------------~~~~~~~~~~~e~~~ 55 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVL------------------------------AAEKEYEKLQEEVDL 55 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchh------------------------------hHHHHHHHHHHHHHH
Confidence 5799999999999988 799999998665321110 001112235566666
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPH 455 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDpH 455 (760)
++++. +..-+.+...+ ......+++|||++|++|.++.... .......+...+ +-..+..+|..|++|+|++
T Consensus 56 l~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~ 129 (265)
T cd06631 56 LKSLK----HVNIVQYLGTC-LDDNTISIFMEFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIK 129 (265)
T ss_pred HHhcC----CCCEeeEeeEe-ecCCeEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcC
Confidence 66552 22222222222 2335679999999999999875322 122333322221 2234678899999999999
Q ss_pred CCcEEEeccCCCcEEEEeecceeccChhhHH-HHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 456 PGNIAVDDVNGGRLIFYDFGMMGSISPNIRE-GLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 456 PGNILV~~~~~g~l~LiDFG~v~~l~~~~r~-~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
|.||++++ ++.++|+|||++..+...... ...... ....+...+++++...-....+..|++++.-.+.+++.
T Consensus 130 p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~ 203 (265)
T cd06631 130 GNNVMLMP--NGIIKLIDFGCARRLAWVGLHGTHSNML-KSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMAT 203 (265)
T ss_pred HHhEEECC--CCeEEeccchhhHhhhhccccccccccc-cccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHh
Confidence 99999985 789999999988765321100 000000 11124455667777665556677899998877665543
No 140
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.42 E-value=1.4e-12 Score=139.38 Aligned_cols=189 Identities=17% Similarity=0.134 Sum_probs=115.5
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.++.|++|.||+|+. .++.|+||...++.... ......+.+|..
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~---------------------------------~~~~~~~~~e~~ 53 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL---------------------------------RNQIQQVFVERD 53 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh---------------------------------HHHHHHHHHHHH
Confidence 6799999999999998 58999999765421000 001112334544
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCC--CeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTT--PQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st--~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
.+..+ +++ .+++++..+++ ..++||||++|++|.++..... ......+...+ +-..+..+|..|++|+
T Consensus 54 ~l~~~-----~~~--~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 125 (305)
T cd05609 54 ILTFA-----ENP--FVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLHNYGIVHR 125 (305)
T ss_pred HHHhC-----CCC--CeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 44433 222 44566655444 3499999999999988763321 12222222211 2245788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHH---------HHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL---------LEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 523 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l---------~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~ 523 (760)
|+||+||+++. ++.++++|||++..........+ .........+...+++++...-+..++..|++++.
T Consensus 126 dl~p~NIll~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 203 (305)
T cd05609 126 DLKPDNLLITS--MGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMG 203 (305)
T ss_pred CCchHHEEECC--CCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHH
Confidence 99999999985 88999999998763111100000 00000001234445666665555567788999988
Q ss_pred HHHHHHH
Q 004334 524 RTAQFFL 530 (760)
Q Consensus 524 ~~~~~~l 530 (760)
-.+.+++
T Consensus 204 ~vl~el~ 210 (305)
T cd05609 204 IILYEFL 210 (305)
T ss_pred HHHHHHH
Confidence 7766554
No 141
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.42 E-value=1.8e-12 Score=133.85 Aligned_cols=185 Identities=17% Similarity=0.185 Sum_probs=120.4
Q ss_pred ccccccccEEEEEEE-C--C--eeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL-K--G--EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (760)
Q Consensus 300 PIasaSiGQVhrA~l-~--G--~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E 374 (760)
.||+|++|.||+|.+ + | ..||||+.+++... +....+.+|
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-----------------------------------~~~~~~~~e 46 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-----------------------------------DIMDDFLKE 46 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-----------------------------------HHHHHHHHH
Confidence 689999999999998 2 3 36999987764321 112223445
Q ss_pred HHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhCCccc
Q 004334 375 AANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSHGFFH 451 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~l--v~~~L~qI~~~GffH 451 (760)
.+.+.++. +...+.+...+.. ...+++|||++|++|.+...... ...+...+.... +-..+..+|..|++|
T Consensus 47 ~~~l~~l~----h~~iv~~~~~~~~--~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H 120 (257)
T cd05040 47 AAIMHSLD----HENLIRLYGVVLT--HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIH 120 (257)
T ss_pred HHHHhhcC----CCCccceeEEEcC--CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 55555442 2223334444433 67799999999999998654322 223333333222 223467889999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|+||.||+++. ++.++|+|||++..+.......... ....+...++.++.......+...|++++.-.+.+++
T Consensus 121 ~di~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~~---~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~ 194 (257)
T cd05040 121 RDLAARNILLAS--DDKVKIGDFGLMRALPQNEDHYVME---EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMF 194 (257)
T ss_pred cccCcccEEEec--CCEEEeccccccccccccccceecc---cCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHH
Confidence 999999999986 7899999999998875532210000 0112344567777776666677789999987766554
No 142
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.42 E-value=1.6e-12 Score=134.56 Aligned_cols=191 Identities=16% Similarity=0.081 Sum_probs=121.5
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.+.+|.|++|+||+|.. +|++|++|+.+......- . ......+.+|+
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~------------------------------~-~~~~~~~~~e~ 55 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPE------------------------------T-KKEVNALECEI 55 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchh------------------------------h-HHHHHHHHHHH
Confidence 36899999999999998 589999998765311100 0 00012244565
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHH---HHHHHHHHHHHHHHHhCCcccc
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRK---RLGRYAVESYLEQILSHGFFHA 452 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~---~la~~lv~~~L~qI~~~GffHa 452 (760)
..+.++ +++++.-+.-+.+.....+++|||++|.+|.+...... ..... .++..++ ..+..+|..|++|+
T Consensus 56 ~~l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~-~~l~~lH~~~i~H~ 128 (263)
T cd06625 56 QLLKNL-----QHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQIL-EGVEYLHSNMIVHR 128 (263)
T ss_pred HHHHhC-----CCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHH-HHHHHHHhCCeecC
Confidence 555554 23333322223344457899999999999988653221 12222 2233333 34678899999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
|+||+||+++. +++++|+|||++..+........ ......+...++++++..........|++++.-.+.+++.
T Consensus 129 dl~p~nilv~~--~~~~~l~dfg~~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 202 (263)
T cd06625 129 DIKGANILRDS--AGNVKLGDFGASKRLQTICSSGT---GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLT 202 (263)
T ss_pred CCCHHHEEEcC--CCCEEEeecccceeccccccccc---cccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHh
Confidence 99999999985 78999999999887654321110 0001123445666776665556677899999887766553
No 143
>PHA02988 hypothetical protein; Provisional
Probab=99.42 E-value=3.6e-12 Score=135.43 Aligned_cols=186 Identities=10% Similarity=0.007 Sum_probs=121.3
Q ss_pred CccccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 297 DVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 297 d~~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+...++.|+++.||+|.++|+.||||+.+..-... .+..+.+.+|+.
T Consensus 24 ~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~---------------------------------~~~~~~~~~E~~ 70 (283)
T PHA02988 24 TSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGH---------------------------------KVLIDITENEIK 70 (283)
T ss_pred CCeEEeeCCceEEEEEEECCEEEEEEecccccccc---------------------------------HHHHHHHHHHHH
Confidence 34679999999999999999999999876521100 111233456777
Q ss_pred HHHHHHHhcCCCCceeeceeeec---cCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh-CCcc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWE---YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS-HGFF 450 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e---~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~-~Gff 450 (760)
.+.++. +..-+.+-..+.+ .....+++|||++|++|.++..... ..+........ +...+..+|. .|++
T Consensus 71 ~l~~l~----h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~ 145 (283)
T PHA02988 71 NLRRID----SNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEK-DLSFKTKLDMAIDCCKGLYNLYKYTNKP 145 (283)
T ss_pred HHHhcC----CCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCC-CCChhHHHHHHHHHHHHHHHHHhcCCCC
Confidence 777663 2222333333322 1235689999999999998764322 23322222222 2233677887 5999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc--CCCCCCCChHHHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM--GVLVPTGDTTAVRRTAQF 528 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l--G~~~~~~D~~al~~~~~~ 528 (760)
|+|++|.||+++. ++.++++|||++..++..... ..+...++++++..- +..+...|+++++-.+.+
T Consensus 146 Hrdlkp~nill~~--~~~~kl~dfg~~~~~~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~e 214 (283)
T PHA02988 146 YKNLTSVSFLVTE--NYKLKIICHGLEKILSSPPFK---------NVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWE 214 (283)
T ss_pred CCcCChhhEEECC--CCcEEEcccchHhhhcccccc---------ccCcccccCHHHhhhccccccchhhhhHHHHHHHH
Confidence 9999999999986 789999999998766543211 123445566666543 455778899999987776
Q ss_pred HHH
Q 004334 529 FLN 531 (760)
Q Consensus 529 ~l~ 531 (760)
++.
T Consensus 215 l~~ 217 (283)
T PHA02988 215 IFT 217 (283)
T ss_pred HHH
Confidence 654
No 144
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.42 E-value=2.2e-12 Score=135.49 Aligned_cols=184 Identities=16% Similarity=0.166 Sum_probs=119.3
Q ss_pred cccccccccEEEEEEEC--C-----eeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK--G-----EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~--G-----~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
+.||.|++|.||+|... + ..|++|..+...... ....+
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~-----------------------------------~~~~~ 55 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPK-----------------------------------VQQEF 55 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHH-----------------------------------HHHHH
Confidence 57999999999999982 3 679999876532111 11223
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhh---------------cCCCHHHHHH
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRKRLGR 434 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~---------------~g~d~~~la~ 434 (760)
.+|...+.++. +++ +.+++. ......+++|||++|++|.++..... ..++...+..
T Consensus 56 ~~ei~~l~~l~-----h~~--i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 128 (283)
T cd05048 56 RQEAELMSDLQ-----HPN--IVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLH 128 (283)
T ss_pred HHHHHHHHhcC-----Ccc--cceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHH
Confidence 45555555442 222 222222 23456799999999999988654321 1123333322
Q ss_pred HH--HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC
Q 004334 435 YA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV 512 (760)
Q Consensus 435 ~l--v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~ 512 (760)
.+ +-..+..+|..|++|+|++|.||++++ ++.++|+|||++..+......... .-...+..+++++....+.
T Consensus 129 ~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~--~~~~~L~dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~ 202 (283)
T cd05048 129 IAIQIAAGMEYLSSHHFVHRDLAARNCLVGE--GLTVKISDFGLSRDIYSADYYRVQ----SKSLLPVRWMPPEAILYGK 202 (283)
T ss_pred HHHHHHHHHHHHHhCCeeccccccceEEEcC--CCcEEECCCcceeecccccccccc----CCCcccccccCHHHhccCc
Confidence 22 223468899999999999999999985 789999999998866433211100 0011245678888877777
Q ss_pred CCCCCChHHHHHHHHHHH
Q 004334 513 LVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 513 ~~~~~D~~al~~~~~~~l 530 (760)
.++..|++++.-.+.+++
T Consensus 203 ~~~~sDv~slG~il~el~ 220 (283)
T cd05048 203 FTTESDIWSFGVVLWEIF 220 (283)
T ss_pred CchhhhHHHHHHHHHHHH
Confidence 788899999988777665
No 145
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.42 E-value=3.1e-12 Score=132.32 Aligned_cols=179 Identities=15% Similarity=0.137 Sum_probs=118.6
Q ss_pred cccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
+.+|.|++|.||+|...|+.||||..+.... ....+.+|...+
T Consensus 12 ~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-------------------------------------~~~~~~~e~~~l 54 (256)
T cd05039 12 ATIGKGEFGDVMLGDYRGQKVAVKCLKDDST-------------------------------------AAQAFLAEASVM 54 (256)
T ss_pred eeeecCCCceEEEEEecCcEEEEEEeccchh-------------------------------------HHHHHHHHHHHH
Confidence 6799999999999999999999998654211 011233444444
Q ss_pred HHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhc-CCCHHHHHHHH--HHHHHHHHHhCCccccCCC
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL-GVDRKRLGRYA--VESYLEQILSHGFFHADPH 455 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~-g~d~~~la~~l--v~~~L~qI~~~GffHaDpH 455 (760)
.++ .+..-+.+...+ ...+..+++|||++|.+|.++...... ......+.... +-..+..+|..|++|+|++
T Consensus 55 ~~l----~~~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~ 129 (256)
T cd05039 55 TTL----RHPNLVQLLGVV-LQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLA 129 (256)
T ss_pred Hhc----CCcceeeeEEEE-cCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcc
Confidence 444 222222232322 236778999999999999987643221 23333332222 2233678999999999999
Q ss_pred CCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 456 PGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 456 PGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|+||+++. ++.++|+|||.+......... ......+++++....+...+..|++++...+.+++
T Consensus 130 p~Nili~~--~~~~~l~d~g~~~~~~~~~~~---------~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~ 193 (256)
T cd05039 130 ARNVLVSE--DLVAKVSDFGLAKEASQGQDS---------GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 193 (256)
T ss_pred cceEEEeC--CCCEEEccccccccccccccc---------CCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHH
Confidence 99999985 889999999999887543221 11233456666666666777789999887765554
No 146
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.42 E-value=2.1e-12 Score=133.91 Aligned_cols=183 Identities=16% Similarity=0.161 Sum_probs=120.5
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
+.||.|++|.||+|.. +++.||+|...+.-.. ...+.+|...
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~-------------------------------------~~~~~~e~~~ 54 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-------------------------------------VQAFLEEANL 54 (261)
T ss_pred eecCCcCCceEEEEEecCCceEEEEEccCCchh-------------------------------------HHHHHHHHHH
Confidence 5799999999999998 6788999986652110 0123445555
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
+.++ +++++.-...+.......+++|||++|++|.++..... .......+.... +...+..+|..|++|+|+
T Consensus 55 l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl 129 (261)
T cd05072 55 MKTL-----QHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDL 129 (261)
T ss_pred HHhC-----CCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence 5544 22333222222233456799999999999998754321 223333332222 233478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|.||++++ ++.+++.|||.+..+....... .........+++++....+..++..|++++.-.+.+++
T Consensus 130 ~p~nili~~--~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~ 198 (261)
T cd05072 130 RAANVLVSE--SLMCKIADFGLARVIEDNEYTA-----REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIV 198 (261)
T ss_pred chhhEEecC--CCcEEECCCccceecCCCceec-----cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHH
Confidence 999999986 7899999999998875432110 00111234567777777777777889999988776665
No 147
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.42 E-value=3e-12 Score=132.65 Aligned_cols=187 Identities=14% Similarity=0.070 Sum_probs=118.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|.. +|+.||+|..++.-... ......+.+|..
T Consensus 8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---------------------------------~~~~~~~~~ei~ 54 (267)
T cd08224 8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMD---------------------------------AKARQDCLKEID 54 (267)
T ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeecccccc---------------------------------hhhHHHHHHHHH
Confidence 6799999999999999 59999999876411000 001123445555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh---hcCCCHHHHHHHHH--HHHHHHHHhCCccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD---ELGVDRKRLGRYAV--ESYLEQILSHGFFH 451 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~---~~g~d~~~la~~lv--~~~L~qI~~~GffH 451 (760)
.+.++ .+...+.+...+ ......+++|||++|++|.++.... ...+....+...+. -..+..+|..|++|
T Consensus 55 ~l~~~----~~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h 129 (267)
T cd08224 55 LLKQL----DHPNVIKYLASF-IENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMH 129 (267)
T ss_pred HHHhC----CCCCeeeeeeee-ecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 44444 222222222222 2345679999999999998865321 11233333333222 22367789999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+|++|.||+++. ++.++++|||++..+........ ...+...+++++.......+...|++++...+.+++.
T Consensus 130 ~dl~p~nil~~~--~~~~~l~d~~~~~~~~~~~~~~~------~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~ 201 (267)
T cd08224 130 RDIKPANVFITA--TGVVKLGDLGLGRFFSSKTTAAH------SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA 201 (267)
T ss_pred CCcChhhEEECC--CCcEEEeccceeeeccCCCcccc------eecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHH
Confidence 999999999985 78999999999887654322110 0123444556666655555667899999887766654
No 148
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.42 E-value=2.9e-12 Score=133.42 Aligned_cols=187 Identities=15% Similarity=0.159 Sum_probs=119.8
Q ss_pred ccccccccccEEEEEEEC-----CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARLK-----GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l~-----G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~ 372 (760)
.+.||.|++|.||+|++. ...||||+.+++.... ....+.
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~-----------------------------------~~~~~~ 53 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDK-----------------------------------QRLDFL 53 (266)
T ss_pred eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChH-----------------------------------HHHHHH
Confidence 368999999999999982 3579999877643211 111223
Q ss_pred HHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCcc
Q 004334 373 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGFF 450 (760)
Q Consensus 373 ~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~~Gff 450 (760)
.|...+.++ .+..-+.+...+ ......+++|||++|.+|.++.......++...+..... -..+..+|..|++
T Consensus 54 ~e~~~l~~l----~h~~i~~~~~~~-~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~ 128 (266)
T cd05033 54 TEASIMGQF----DHPNIIRLEGVV-TKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYV 128 (266)
T ss_pred HHHHHHHhC----CCCCcceEeEEE-ecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 344444444 222222222222 233557999999999999987644333344444433322 2336789999999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|+|++|.||++++ ++.++++|||++..+...... +.. ........+++++....+..++..|++++.-.+.+++
T Consensus 129 H~di~p~nili~~--~~~~~l~dfg~~~~~~~~~~~-~~~---~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~ 202 (266)
T cd05033 129 HRDLAARNILVNS--NLVCKVSDFGLSRRLEDSEAT-YTT---KGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVM 202 (266)
T ss_pred cCCCCcceEEEcC--CCCEEECccchhhcccccccc-eec---cCCCCCccccChhhhccCCCccccchHHHHHHHHHHH
Confidence 9999999999986 789999999999887522111 000 0011234567777776666778889999987765543
No 149
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.42 E-value=1.4e-12 Score=142.99 Aligned_cols=183 Identities=19% Similarity=0.194 Sum_probs=115.5
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.+.||+|++|.||+|+. +|+.||||+........ +....+.+|.
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----------------------------------~~~~~~~~E~ 71 (359)
T cd07876 26 LKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQ----------------------------------THAKRAYREL 71 (359)
T ss_pred EEEeecCCCEEEEEEEEcCCCceeEEEEecccccch----------------------------------hHHHHHHHHH
Confidence 37899999999999998 58999999875422111 0011223444
Q ss_pred HHHHHHHHhcCCCCceeeceeeecc-----CCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEY-----TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 448 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~-----st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~G 448 (760)
..+..+ .+..-+.+..++... ....++||||++|.....+. ..++...+...+ +-..+..+|.+|
T Consensus 72 ~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~ 143 (359)
T cd07876 72 VLLKCV----NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAG 143 (359)
T ss_pred HHHHhC----CCCCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 444433 222233333333211 12469999999985433221 123333332222 234478899999
Q ss_pred ccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004334 449 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 528 (760)
Q Consensus 449 ffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~ 528 (760)
++|+|+||.||+++. ++.++|+|||++......... .-..++..++++++.......+..|+++++-.+.+
T Consensus 144 ivHrDlkp~NIl~~~--~~~~kl~Dfg~a~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~e 214 (359)
T cd07876 144 IIHRDLKPSNIVVKS--DCTLKILDFGLARTACTNFMM-------TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 214 (359)
T ss_pred cccCCCCHHHEEECC--CCCEEEecCCCccccccCccC-------CCCcccCCCCCchhccCCCCCcchhhHHHHHHHHH
Confidence 999999999999986 889999999998765432110 01123455677777766666778899999988777
Q ss_pred HHH
Q 004334 529 FLN 531 (760)
Q Consensus 529 ~l~ 531 (760)
++.
T Consensus 215 l~t 217 (359)
T cd07876 215 LVK 217 (359)
T ss_pred HHh
Confidence 654
No 150
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.42 E-value=4.6e-12 Score=131.52 Aligned_cols=183 Identities=17% Similarity=0.170 Sum_probs=121.0
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
+.||.|++|+||+|.. .+..||+|..+++.... ..+.+|+..
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~-------------------------------------~~~~~E~~~ 54 (260)
T cd05070 12 KKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSP-------------------------------------ESFLEEAQI 54 (260)
T ss_pred heeccccCceEEEEEecCCceeEEEEecCCCCCH-------------------------------------HHHHHHHHH
Confidence 4799999999999998 57889999987742110 113345444
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
+.++ .+...+.+...+ .....+++|||++|++|.++..... ...+...+.... +-..+..+|..|++|+|+
T Consensus 55 l~~l----~~~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di 128 (260)
T cd05070 55 MKKL----RHDKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDL 128 (260)
T ss_pred HHhc----CCCceEEEEeEE--CCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 4444 233333443333 2356799999999999988754221 123333332222 223467899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+|.||++++ ++.++|+|||.+..+........ .-..+...+++++....+..+...|++++...+.+++.
T Consensus 129 ~p~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~ 198 (260)
T cd05070 129 RSANILVGD--GLVCKIADFGLARLIEDNEYTAR-----QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVT 198 (260)
T ss_pred ccceEEEeC--CceEEeCCceeeeeccCcccccc-----cCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHh
Confidence 999999986 78999999999987754321110 00112345777887776777778999999887776653
No 151
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.41 E-value=2.9e-12 Score=134.63 Aligned_cols=190 Identities=16% Similarity=0.178 Sum_probs=121.1
Q ss_pred hhhhhcccCccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHH
Q 004334 289 LDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDE 366 (760)
Q Consensus 289 ~~~iF~~fd~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E 366 (760)
++++|... +.||+|++|.||+|.. +|+.||||+....... .
T Consensus 2 ~~~~~~~~--~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~-----------------------------------~ 44 (277)
T cd06641 2 PEELFTKL--EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-----------------------------------D 44 (277)
T ss_pred HHHhhhhh--eeEeecCCeEEEEEEECCCCcEEEEEEeccccch-----------------------------------H
Confidence 34555543 4699999999999987 5899999986431100 0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH--HHHHHH
Q 004334 367 CASVLYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQI 444 (760)
Q Consensus 367 ~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI 444 (760)
....+.+|...+.++ .+..-+.+...+ ......++||||++|+++.++... ...+...+.....+ ..+..+
T Consensus 45 ~~~~~~~e~~~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~l 117 (277)
T cd06641 45 EIEDIQQEITVLSQC----DSPYVTKYYGSY-LKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYL 117 (277)
T ss_pred HHHHHHHHHHHHHhc----CCCCEeEEEEEE-EeCCeEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHH
Confidence 112234455555444 222223333333 334568999999999999886532 23344444333222 236778
Q ss_pred HhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004334 445 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 524 (760)
Q Consensus 445 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~ 524 (760)
|..|++|+|++|+||+++. ++.++++|||++..+....... ....++..+++++....+...+..|++++..
T Consensus 118 h~~~i~h~dl~p~Ni~i~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ 189 (277)
T cd06641 118 HSEKKIHRDIKAANVLLSE--HGEVKLADFGVAGQLTDTQIKR------NTFVGTPFWMAPEVIKQSAYDSKADIWSLGI 189 (277)
T ss_pred ccCCeecCCCCHHhEEECC--CCCEEEeecccceecccchhhh------ccccCCccccChhhhccCCCCchhhHHHHHH
Confidence 9999999999999999985 7899999999988776532111 1112344456666665555666789999887
Q ss_pred HHHHHH
Q 004334 525 TAQFFL 530 (760)
Q Consensus 525 ~~~~~l 530 (760)
.+.+++
T Consensus 190 ~l~~l~ 195 (277)
T cd06641 190 TAIELA 195 (277)
T ss_pred HHHHHH
Confidence 665543
No 152
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.41 E-value=1.7e-12 Score=138.42 Aligned_cols=182 Identities=18% Similarity=0.161 Sum_probs=119.9
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|.. +|+.||||.....-... ...+.+|..
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~e~~ 68 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPK------------------------------------KELIINEIL 68 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecCccch------------------------------------HHHHHHHHH
Confidence 5799999999999997 69999999764321100 011234444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI~~~GffHaDp 454 (760)
.+..+ +++++.-+.-+.......++||||++|.++.++... ...+...+...+.+ ..+..+|..|++|+|+
T Consensus 69 ~l~~~-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL 141 (297)
T cd06656 69 VMREN-----KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHSNQVIHRDI 141 (297)
T ss_pred HHHhC-----CCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 33332 223322222222345567999999999999987532 22333333332222 3367899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+|.||+++. ++.++++|||.+..+.+..... ....+++.+++++....+..++..|++++.-.+.+++.
T Consensus 142 ~p~Nili~~--~~~~~l~Dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~t 210 (297)
T cd06656 142 KSDNILLGM--DGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVE 210 (297)
T ss_pred CHHHEEECC--CCCEEECcCccceEccCCccCc------CcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHh
Confidence 999999985 7899999999988776543211 11234556777777766666778899999877766553
No 153
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.41 E-value=3.6e-12 Score=131.61 Aligned_cols=181 Identities=13% Similarity=0.081 Sum_probs=117.4
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
+.||.|++|+||+|.. +++.+|||+.+.+.... ..+.+|.+.
T Consensus 10 ~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~-------------------------------------~~~~~e~~~ 52 (256)
T cd05112 10 QEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSE-------------------------------------EDFIEEAQV 52 (256)
T ss_pred eeecCcccceEEEEEEeCCCeEEEEECCCCCCCH-------------------------------------HHHHHHHHH
Confidence 5799999999999998 58899999876532110 112345555
Q ss_pred HHHHHHhcCCCCceeeceee--eccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCccccC
Q 004334 378 AELFASNFKDMDYVKVPTIF--WEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGFFHAD 453 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy--~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~~GffHaD 453 (760)
+.++ ++++ +++.+ .......+++|||++|++|.++............+..... -..+..+|..|++|+|
T Consensus 53 l~~l-----~~~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~d 125 (256)
T cd05112 53 MMKL-----SHPK--LVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRD 125 (256)
T ss_pred HHhC-----CCCC--eeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 5544 1222 22333 2334567999999999999887543322233333332222 2346778999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
++|.||+++. ++.++++|||++..+........ ........+++++...-+..+...|++++...+.+++
T Consensus 126 l~p~ni~i~~--~~~~~l~d~g~~~~~~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~ 195 (256)
T cd05112 126 LAARNCLVGE--NQVVKVSDFGMTRFVLDDQYTSS-----TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVF 195 (256)
T ss_pred cccceEEEcC--CCeEEECCCcceeecccCccccc-----CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHH
Confidence 9999999985 78999999999887644311000 0001123566777766666677789999887665544
No 154
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.41 E-value=2.4e-12 Score=134.04 Aligned_cols=188 Identities=14% Similarity=0.179 Sum_probs=118.7
Q ss_pred ccccccccccEEEEEEE--CC---eeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KG---EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G---~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~ 372 (760)
.+.||.|++|+||+|++ +| ..|+||..+++..... ...+.
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~-----------------------------------~~~~~ 54 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQ-----------------------------------RQDFL 54 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHH-----------------------------------HHHHH
Confidence 36899999999999998 34 3799998766422110 11233
Q ss_pred HHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcc
Q 004334 373 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFF 450 (760)
Q Consensus 373 ~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~Gff 450 (760)
+|++.+.++ .+..-+.+...+ ......+++|||++|.+|.++........+...+.... +...+..+|..|++
T Consensus 55 ~e~~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~ 129 (268)
T cd05063 55 SEASIMGQF----SHHNIIRLEGVV-TKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYV 129 (268)
T ss_pred HHHHHHhcC----CCCCeeEEEEEE-ccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 444444333 222223333333 23356799999999999988764332233433333322 22346889999999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|+|+||.||++++ ++.++++|||+...+........... .......+++++....+..+...|++++.-.+.+++
T Consensus 130 H~dlkp~Nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~~---~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell 204 (268)
T cd05063 130 HRDLAARNILVNS--NLECKVSDFGLSRVLEDDPEGTYTTS---GGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVM 204 (268)
T ss_pred ccccchhhEEEcC--CCcEEECCCccceecccccccceecc---CCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHH
Confidence 9999999999985 78999999999987754332211100 001123456677766666677889999887665543
No 155
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.41 E-value=5.8e-12 Score=123.00 Aligned_cols=180 Identities=18% Similarity=0.236 Sum_probs=118.9
Q ss_pred cccccccEEEEEEEC--CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 301 IAAASLGQVHRARLK--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 301 IasaSiGQVhrA~l~--G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
|++|++|+||+++.. |++++||+.+++.... ....+.+|.+.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-----------------------------------~~~~~~~e~~~~ 45 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-----------------------------------LLEELLREIEIL 45 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-----------------------------------HHHHHHHHHHHH
Confidence 689999999999994 9999999987743221 112344555555
Q ss_pred HHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 379 ELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
..+.. ..+|.++. ...+..+++|||++|.+|.++........+........ +...+..+|..|++|+|+
T Consensus 46 ~~l~~-------~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl 118 (215)
T cd00180 46 KKLNH-------PNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDL 118 (215)
T ss_pred HhcCC-------CCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence 55532 23444443 33357899999999999998764332234443333322 223468899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~~~~~~ 529 (760)
+|+||++++ .+++++|+|||.+........ ..........++.++....+ ......|.+++...+.++
T Consensus 119 ~~~ni~~~~-~~~~~~l~d~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 119 KPENILLDS-DNGKVKLADFGLSKLLTSDKS------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred CHhhEEEeC-CCCcEEEecCCceEEccCCcc------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence 999999984 257999999999998876542 01112234445555555554 555667888887655444
No 156
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.41 E-value=5.5e-12 Score=130.62 Aligned_cols=181 Identities=17% Similarity=0.165 Sum_probs=118.0
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
+.||.|++|.||+|.+ +++.||||+..++.... ..+.+|...
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~-------------------------------------~~~~~e~~~ 54 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSP-------------------------------------EAFLQEAQI 54 (261)
T ss_pred eeeccCcceEEEEEEEcCCceEEEEEecCCccCH-------------------------------------HHHHHHHHH
Confidence 6899999999999998 56889999877632110 112344444
Q ss_pred HHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 378 AELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
++++ . ++ .+++.+. ......+++|||++|.+|.++..... ...+...+...+ +-..+..+|..|++|+
T Consensus 55 l~~l----~-h~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~ 127 (261)
T cd05034 55 MKKL----R-HD--KLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHR 127 (261)
T ss_pred HhhC----C-CC--CEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 4443 2 22 2333332 23356799999999999988754322 123333332222 2233678899999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|++|.||++++ ++.++++|||.+..+......... -......+++++...-+..++..|++++...+.+++
T Consensus 128 di~p~nili~~--~~~~~l~d~g~~~~~~~~~~~~~~-----~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~ 198 (261)
T cd05034 128 DLAARNILVGE--NLVCKIADFGLARLIEDDEYTARE-----GAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIV 198 (261)
T ss_pred CcchheEEEcC--CCCEEECccccceeccchhhhhhh-----ccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHH
Confidence 99999999986 799999999999887642211100 011223466777766666677889999987766654
No 157
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.41 E-value=1.8e-12 Score=136.39 Aligned_cols=187 Identities=18% Similarity=0.160 Sum_probs=115.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|+. +|+.||+|+.+...... . . .....+|..
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~-----------------------~----~-------~~~~~~e~~ 51 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED-----------------------G----L-------PLSTVREVA 51 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC-----------------------C----C-------chHHHHHHH
Confidence 5699999999999998 58999999876532110 0 0 001122333
Q ss_pred HHHHHHHhcCCCCceeeceeeec----cCCCeEEEEeecCCCchhhhhhh-hhcCCCHHHHHHHH--HHHHHHHHHhCCc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWE----YTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYA--VESYLEQILSHGF 449 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e----~st~~vLVME~ieG~~L~d~~~l-~~~g~d~~~la~~l--v~~~L~qI~~~Gf 449 (760)
.++++.. +.+..-+.+..++.. .....+++|||++| .+.++... ...+++...+...+ +-..+..+|..|+
T Consensus 52 ~l~~l~~-~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 129 (288)
T cd07863 52 LLKRLEA-FDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCI 129 (288)
T ss_pred HHHHhhh-cCCCCeeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3333321 122222222222221 12346899999997 56554322 22234444433332 2234788999999
Q ss_pred cccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004334 450 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 450 fHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~ 529 (760)
+|+|++|+||+++. ++.++|+|||++..++..... ....++..+++++....+..+...|+++++-.+.++
T Consensus 130 vH~dikp~Nili~~--~~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l 200 (288)
T cd07863 130 VHRDLKPENILVTS--GGQVKLADFGLARIYSCQMAL-------TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 200 (288)
T ss_pred ecCCCCHHHEEECC--CCCEEECccCccccccCcccC-------CCccccccccCchHhhCCCCCCcchhhhHHHHHHHH
Confidence 99999999999985 789999999998876543210 011234556777777666677889999999877666
Q ss_pred H
Q 004334 530 L 530 (760)
Q Consensus 530 l 530 (760)
+
T Consensus 201 ~ 201 (288)
T cd07863 201 F 201 (288)
T ss_pred H
Confidence 4
No 158
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.41 E-value=1.1e-12 Score=134.18 Aligned_cols=138 Identities=21% Similarity=0.299 Sum_probs=96.9
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
.+||+||||.+|.|.. +|++||||+-...+... .|.-|++
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hp--------------------------------------qL~yEsk 62 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHP--------------------------------------QLLYESK 62 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCCCc--------------------------------------chhHHHH
Confidence 6899999999999998 79999999865543221 1223333
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCC--eEEEEeecCCCchhhhhhhhhcCCCHHHH---HHHHHHHHHHHHHhCCccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTP--QILTMEYVPGIKINRIQSLDELGVDRKRL---GRYAVESYLEQILSHGFFH 451 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~--~vLVME~ieG~~L~d~~~l~~~g~d~~~l---a~~lv~~~L~qI~~~GffH 451 (760)
--..++ ..+.+|.+.+-.+.+ .|||||.. |.+|.|+.......+..+.+ |..++. -++.+|.++|+|
T Consensus 63 vY~iL~------~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~-RiEyvH~r~fiH 134 (341)
T KOG1163|consen 63 VYRILQ------GGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLS-RIEYVHLRNFIH 134 (341)
T ss_pred HHHHhc------cCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHH-HHHHHHhhcccc
Confidence 333332 346788888755543 59999998 89999987665544444332 222222 267789999999
Q ss_pred cCCCCCcEEEec-cCCCcEEEEeecceeccCh
Q 004334 452 ADPHPGNIAVDD-VNGGRLIFYDFGMMGSISP 482 (760)
Q Consensus 452 aDpHPGNILV~~-~~~g~l~LiDFG~v~~l~~ 482 (760)
+|+||.|+|..- ..-.++.|||||+++.+-+
T Consensus 135 RDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 135 RDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred ccCCccceeeccccccceEEEEeccchhhhcc
Confidence 999999999852 1235899999999987643
No 159
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.41 E-value=3.6e-12 Score=130.92 Aligned_cols=183 Identities=16% Similarity=0.172 Sum_probs=119.7
Q ss_pred cccccccccEEEEEEEC--C----eeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK--G----EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~--G----~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~ 372 (760)
+.+|.|++|+||+|+.. + ..||+|+.++..... ....+.
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~ 49 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ-----------------------------------QIEEFL 49 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH-----------------------------------HHHHHH
Confidence 57999999999999993 3 889999987642211 112234
Q ss_pred HHHHHHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcC-CCHHHHHHHHH--HHHHHHHHhC
Q 004334 373 QEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELG-VDRKRLGRYAV--ESYLEQILSH 447 (760)
Q Consensus 373 ~EA~nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g-~d~~~la~~lv--~~~L~qI~~~ 447 (760)
+|...+..+ ++++ +++.+. ......+++|||++|.+|.++....... .+...+...+. -..+..+|..
T Consensus 50 ~e~~~l~~l-----~~~~--i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~ 122 (258)
T smart00219 50 REARIMRKL-----DHPN--IVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK 122 (258)
T ss_pred HHHHHHHhc-----CCCc--hheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC
Confidence 454444444 2222 233332 2235689999999999998876432221 44444333322 2246788999
Q ss_pred CccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004334 448 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 527 (760)
Q Consensus 448 GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~ 527 (760)
|++|+|++|+||++++ ++.++|+|||++........ +.. ........+++++....+..+...|++++.-.+.
T Consensus 123 ~~~h~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~--~~~---~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~ 195 (258)
T smart00219 123 NFIHRDLAARNCLVGE--NLVVKISDFGLSRDLYDDDY--YKK---KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLW 195 (258)
T ss_pred CeeecccccceEEEcc--CCeEEEcccCCceecccccc--ccc---ccCCCcccccChHHhccCCCCcchhHHHHHHHHH
Confidence 9999999999999986 78999999999987765411 000 0011234566677766677788899999987665
Q ss_pred HHH
Q 004334 528 FFL 530 (760)
Q Consensus 528 ~~l 530 (760)
+++
T Consensus 196 ~l~ 198 (258)
T smart00219 196 EIF 198 (258)
T ss_pred HHH
Confidence 554
No 160
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.41 E-value=1.9e-12 Score=135.54 Aligned_cols=186 Identities=17% Similarity=0.125 Sum_probs=119.9
Q ss_pred cccccccccEEEEEEE-C------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-K------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
+.+|.|++|.||+|+. + ++.||||+.+.... .+....+
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~-----------------------------------~~~~~~~ 55 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS-----------------------------------NDARKDF 55 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCC-----------------------------------HHHHHHH
Confidence 5799999999999987 2 47899998654211 1122334
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-------------cCCCHHHHHHHH--
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-------------LGVDRKRLGRYA-- 436 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-------------~g~d~~~la~~l-- 436 (760)
.+|++.++++. +..-+.+... .......+++|||++|++|.++..... ..+....+...+
T Consensus 56 ~~e~~~l~~l~----~~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 130 (280)
T cd05049 56 EREAELLTNFQ----HENIVKFYGV-CTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQ 130 (280)
T ss_pred HHHHHHHHhcC----CCCchheeeE-EecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHH
Confidence 56666666552 2222222222 233467899999999999998754221 111222222221
Q ss_pred HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCC
Q 004334 437 VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPT 516 (760)
Q Consensus 437 v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~ 516 (760)
+-..+..+|..|++|+|++|+||+++. ++.++|+|||++..+........ .........++++++...+..++.
T Consensus 131 i~~~l~~lH~~~i~h~dlkp~nili~~--~~~~kl~d~g~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~ 204 (280)
T cd05049 131 IASGMVYLASQHFVHRDLATRNCLVGY--DLVVKIGDFGMSRDVYTTDYYRV----GGHTMLPIRWMPPESIMYRKFTTE 204 (280)
T ss_pred HHHHHHHHhhCCeeccccccceEEEcC--CCeEEECCcccceecccCcceec----CCCCcccceecChhhhccCCcchh
Confidence 223367889999999999999999986 79999999999876533211000 000112356788888887878888
Q ss_pred CChHHHHHHHHHHH
Q 004334 517 GDTTAVRRTAQFFL 530 (760)
Q Consensus 517 ~D~~al~~~~~~~l 530 (760)
.|++++.-.+.+++
T Consensus 205 ~Di~slG~il~e~~ 218 (280)
T cd05049 205 SDVWSFGVVLWEIF 218 (280)
T ss_pred hhHHHHHHHHHHHH
Confidence 99999987776655
No 161
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.40 E-value=3.8e-12 Score=131.31 Aligned_cols=186 Identities=12% Similarity=0.056 Sum_probs=119.5
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+++|.|++|.||+|.. +|+.||||........ .+..+.+.+|..
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----------------------------------~~~~~~~~~e~~ 51 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS----------------------------------RRERKAAEQEAQ 51 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC----------------------------------HHHHHHHHHHHH
Confidence 5799999999999998 5889999975431100 001112334444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHHH--HHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAV--ESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~lv--~~~L~qI~~~GffHaD 453 (760)
.+.++ .+...+.+...+.......+++|||++|.++.+...... ...+...+...+. -..+..+|..|++|+|
T Consensus 52 ~l~~l----~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~d 127 (257)
T cd08223 52 LLSQL----KHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRD 127 (257)
T ss_pred HHHhC----CCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence 44444 222223333333223334689999999999988654321 2234333333222 2346889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
++|.||+++. ++.++|+|||++..+...... .....+.+.+++++....+..++..|++++...+.+++
T Consensus 128 i~p~nil~~~--~~~~~l~df~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~ 196 (257)
T cd08223 128 LKTQNVFLTR--TNIIKVGDLGIARVLENQCDM------ASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMA 196 (257)
T ss_pred CCchhEEEec--CCcEEEecccceEEecccCCc------cccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHH
Confidence 9999999985 789999999998876432210 01123455677888877777777889999987766554
No 162
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.40 E-value=3.5e-12 Score=132.08 Aligned_cols=182 Identities=13% Similarity=0.106 Sum_probs=117.3
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
+.||.|++|.||+|++ ++..||+|..+.+-.. ...+.+|+..
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~-------------------------------------~~~~~~e~~~ 52 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGAMS-------------------------------------EEDFIEEAKV 52 (256)
T ss_pred eEecCCcCceEEEEEeccCceEEEEecccCCcc-------------------------------------HHHHHHHHHH
Confidence 5699999999999999 5678999976542100 0123445555
Q ss_pred HHHHHHhcCCCCce-eeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 378 AELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 378 l~~f~~~~~~~~~V-~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
+.++. ++++ .+... .......+++|||++|++|.++........+...+.... +-..+..+|..|++|+|+
T Consensus 53 l~~l~-----h~~i~~~~~~-~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 126 (256)
T cd05114 53 MMKLS-----HPKLVQLYGV-CTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDL 126 (256)
T ss_pred HHHCC-----CCCceeEEEE-EccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence 55542 2332 22222 234456799999999999988654322223433333322 223467899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|+||++++ ++.++++|||.+..+.......- ........+++++.......+...|++++.-.+.+++
T Consensus 127 ~p~ni~i~~--~~~~kl~d~g~~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~ 195 (256)
T cd05114 127 AARNCLVSS--TGVVKVSDFGMTRYVLDDEYTSS-----SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVF 195 (256)
T ss_pred CcceEEEcC--CCeEEECCCCCccccCCCceecc-----CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHH
Confidence 999999985 78999999999887643221100 0011223566677766555667789999887766554
No 163
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.40 E-value=2.4e-12 Score=135.75 Aligned_cols=189 Identities=18% Similarity=0.169 Sum_probs=121.8
Q ss_pred cccccccccEEEEEEE------CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l------~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~ 372 (760)
..||.|++|.||.|+. +|..||+|..++..... ....+.
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~-----------------------------------~~~~~~ 54 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGN-----------------------------------HIADLK 54 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHH-----------------------------------HHHHHH
Confidence 4699999999999984 37899999877642111 111234
Q ss_pred HHHHHHHHHHHhcCCCCceeeceeeecc-CCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCc
Q 004334 373 QEAANAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 449 (760)
Q Consensus 373 ~EA~nl~~f~~~~~~~~~V~VP~vy~e~-st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~Gf 449 (760)
+|...++++ .+...+.+...+... ....++||||++|++|.++........+...+...+ +...+..+|..|+
T Consensus 55 ~e~~~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi 130 (284)
T cd05079 55 KEIEILRNL----YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQY 130 (284)
T ss_pred HHHHHHHhC----CCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 555555544 232233333333322 234689999999999998764322223433332222 2234788999999
Q ss_pred cccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004334 450 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 450 fHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~ 529 (760)
+|+|+||.||+++. ++.++|.|||++..+....... . ......+...+++++....+..++..|++++.-.+.++
T Consensus 131 ~H~dlkp~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~--~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el 205 (284)
T cd05079 131 VHRDLAARNVLVES--EHQVKIGDFGLTKAIETDKEYY--T-VKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYEL 205 (284)
T ss_pred eecccchheEEEcC--CCCEEECCCccccccccCccce--e-ecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhh
Confidence 99999999999985 7899999999998775432110 0 00112234446677766666667789999999877776
Q ss_pred HH
Q 004334 530 LN 531 (760)
Q Consensus 530 l~ 531 (760)
+.
T Consensus 206 lt 207 (284)
T cd05079 206 LT 207 (284)
T ss_pred hc
Confidence 53
No 164
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.40 E-value=5.9e-12 Score=129.59 Aligned_cols=181 Identities=19% Similarity=0.179 Sum_probs=121.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+++|++|.||+|+. +|+.|++|....... ...+.+|.+
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--------------------------------------~~~~~~e~~ 50 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--------------------------------------LQEIIKEIS 50 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--------------------------------------HHHHHHHHH
Confidence 5799999999999999 489999998654100 122344555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI~~~GffHaDp 454 (760)
.+.++ .+..-+.+...+ ......+++|||++|.+|.++.......++...+...+.+ ..+..+|..|++|+|+
T Consensus 51 ~~~~l----~~~~i~~~~~~~-~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl 125 (256)
T cd06612 51 ILKQC----DSPYIVKYYGSY-FKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDI 125 (256)
T ss_pred HHHhC----CCCcEeeeeeee-ecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 55544 222223333322 2235678999999999999976543334444443333222 3467889999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|+||+++. ++.++|.|||++..+....... ....+...++.++.......+...|+++++-.+.+++
T Consensus 126 ~~~ni~~~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~ 193 (256)
T cd06612 126 KAGNILLNE--EGQAKLADFGVSGQLTDTMAKR------NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMA 193 (256)
T ss_pred CcceEEECC--CCcEEEcccccchhcccCcccc------ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHH
Confidence 999999986 7899999999998876543211 1122445567777766666667789999987766654
No 165
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.40 E-value=1.1e-12 Score=141.92 Aligned_cols=181 Identities=18% Similarity=0.169 Sum_probs=117.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+-||.||+|.||.|.. +|+..|||...-.- .+ ..+.+.+|.+
T Consensus 23 ~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~------------------------------~~------~~~~l~~Ei~ 66 (313)
T KOG0198|consen 23 KLLGRGSFGSVYLATNKKTGELMAVKSVELED------------------------------SP------TSESLEREIR 66 (313)
T ss_pred ccccCccceEEEEEEecCCCcceeeeeeeccc------------------------------ch------hHHHHHHHHH
Confidence 5799999999999999 49999999642210 00 0234556666
Q ss_pred HHHHHHHhcCCCCceeeceeee---ccCC-CeEEEEeecCCCchhhhhhhhhcCCCHHHHHH--HHHHHHHHHHHhCCcc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW---EYTT-PQILTMEYVPGIKINRIQSLDELGVDRKRLGR--YAVESYLEQILSHGFF 450 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~---e~st-~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~--~lv~~~L~qI~~~Gff 450 (760)
.+.++. +++| -+.|. ...+ ...+.|||++|++|.++..-....+....+.. ..+-.-+.++|.+||+
T Consensus 67 iL~~l~-----~p~I--V~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~v 139 (313)
T KOG0198|consen 67 ILSRLN-----HPNI--VQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIV 139 (313)
T ss_pred HHHhCC-----CCCE--EeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 666553 2221 11121 1111 47899999999999997653332233222221 2233347889999999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC-CCCCCChHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV-LVPTGDTTAVRRTA 526 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~-~~~~~D~~al~~~~ 526 (760)
|||+||.|||++. .++.++|.|||+++........ .....-..+.+.+|+++.+.-|. ..+..|++++.-.+
T Consensus 140 H~DiK~~NiLl~~-~~~~~KlaDFG~a~~~~~~~~~---~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtV 212 (313)
T KOG0198|consen 140 HCDIKPANILLDP-SNGDVKLADFGLAKKLESKGTK---SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTV 212 (313)
T ss_pred ccCcccceEEEeC-CCCeEEeccCcccccccccccc---ccccccccCCccccCchhhcCCCcCCccchhhhcCCEE
Confidence 9999999999984 2589999999999988741000 00011245778899999888654 33578999887544
No 166
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.40 E-value=2.8e-12 Score=135.13 Aligned_cols=180 Identities=17% Similarity=0.129 Sum_probs=118.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
++||.|++|.||+|+. +|+.||||+...+... +....+.+|.+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-----------------------------------~~~~~~~~E~~ 51 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITV-----------------------------------ELQKQIMSELE 51 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCCh-----------------------------------HHHHHHHHHHH
Confidence 5799999999999998 6899999987543211 11112344555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHP 456 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDpHP 456 (760)
.+.++ +++++.-+.-+.......+++|||++|.++........ .....++..++ ..+..+|..|++|+|++|
T Consensus 52 ~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~qi~-~~l~~lH~~~i~H~dlkp 123 (279)
T cd06619 52 ILYKC-----DSPYIIGFYGAFFVENRISICTEFMDGGSLDVYRKIPE--HVLGRIAVAVV-KGLTYLWSLKILHRDVKP 123 (279)
T ss_pred HHHhC-----CCCCeeeEEEEEEECCEEEEEEecCCCCChHHhhcCCH--HHHHHHHHHHH-HHHHHHHHCCEeeCCCCH
Confidence 44444 22332222222233456789999999998865432111 01122333333 336789999999999999
Q ss_pred CcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 457 GNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 457 GNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
.||+++. ++.++|+|||++..+...... ...+...+++++....+..+...|++++.-.+.+++.
T Consensus 124 ~Nill~~--~~~~~l~dfg~~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~ 188 (279)
T cd06619 124 SNMLVNT--RGQVKLCDFGVSTQLVNSIAK--------TYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELAL 188 (279)
T ss_pred HHEEECC--CCCEEEeeCCcceeccccccc--------CCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHh
Confidence 9999986 889999999999876543221 1234566777777766666778899999887766653
No 167
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.40 E-value=1.8e-12 Score=147.52 Aligned_cols=185 Identities=17% Similarity=0.158 Sum_probs=121.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|.||-|-|-.|++ +|+.+|||+..-.... + +.....+.+|.-
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~--------------------s-------------~s~~~~IerEIv 64 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSEL--------------------S-------------SSQPAGIEREIV 64 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeecccccc--------------------c-------------cccccchhhhhH
Confidence 5799999999999999 7999999986442100 0 000111233444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI~~~GffHaDp 454 (760)
.|+.+ .| ++|.----.|+-.+..+||.||++|+.|.++.- ...++...+.+....+ ..+..+|..+|.|+|+
T Consensus 65 iMkLi----~H-pnVl~LydVwe~~~~lylvlEyv~gGELFdylv-~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDL 138 (786)
T KOG0588|consen 65 IMKLI----EH-PNVLRLYDVWENKQHLYLVLEYVPGGELFDYLV-RKGPLPEREAAHFFRQILDGVSYCHAFNICHRDL 138 (786)
T ss_pred HHHHh----cC-CCeeeeeeeeccCceEEEEEEecCCchhHHHHH-hhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccC
Confidence 44433 22 333333334466677899999999999999763 3333333333333222 2255678999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~~~~~~l~ 531 (760)
||.|+|++. .++|++.||||+.--.+.- + +--..|.+.|++++++.-- +-....|+|.-+.++..+|.
T Consensus 139 KpENlLLd~--~~nIKIADFGMAsLe~~gk---l----LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLt 207 (786)
T KOG0588|consen 139 KPENLLLDV--KNNIKIADFGMASLEVPGK---L----LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLT 207 (786)
T ss_pred Cchhhhhhc--ccCEeeeccceeecccCCc---c----ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHh
Confidence 999999986 5669999999997543321 1 2224578999999987432 33456799999887766553
No 168
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.40 E-value=4.1e-12 Score=134.07 Aligned_cols=183 Identities=14% Similarity=0.133 Sum_probs=114.3
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.||.|++|.||+|.. +|+.||||+..+.....-.. ......|...
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~---------------------------------~~~~~~~~~~ 47 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG---------------------------------ETLALNERIM 47 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchh---------------------------------HHHHHHHHHH
Confidence 379999999999998 58999999876531110000 0001122222
Q ss_pred HHHHHHhcCCCCceeeceeeec--cCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHH---HHHHHHHHHHHHhCCcccc
Q 004334 378 AELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLG---RYAVESYLEQILSHGFFHA 452 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e--~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la---~~lv~~~L~qI~~~GffHa 452 (760)
+..++. . +++.+ +..++. .....++||||++|+.|.+..... ..+....+. ..++ ..+..+|..|++|+
T Consensus 48 ~~~~~~-~-~~~~i--~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~-~~l~~~~~~~~~~ql~-~~l~~lH~~~i~H~ 121 (278)
T cd05606 48 LSLVST-G-DCPFI--VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-GVFSEAEMRFYAAEII-LGLEHMHNRFVVYR 121 (278)
T ss_pred HHHHHh-C-CCCcE--eeeeeeeecCCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHH-HHHHHHHHCCEEcC
Confidence 222221 1 22332 333322 234578999999999998765322 123333322 2222 23678899999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~~~~~~l~ 531 (760)
|++|.||+++. ++.++|+|||++..+....... ..+...+++++....+ ..+...|++++...+.+++.
T Consensus 122 di~p~nili~~--~~~~kl~dfg~~~~~~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~ 191 (278)
T cd05606 122 DLKPANILLDE--HGHVRISDLGLACDFSKKKPHA--------SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR 191 (278)
T ss_pred CCCHHHEEECC--CCCEEEccCcCccccCccCCcC--------cCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHh
Confidence 99999999985 7899999999987765432211 1345566777776544 35667899999877766553
No 169
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.40 E-value=1.7e-12 Score=135.19 Aligned_cols=190 Identities=18% Similarity=0.182 Sum_probs=116.5
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
++||+|++|+||+|+. +|+.|++|+..+..-.. .+....+.+|..
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~---------------------------------~~~~~~~~~e~~ 53 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIK---------------------------------EKKVKYVKIEKE 53 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEechHhccc---------------------------------hHHHHHHHHHHH
Confidence 5899999999999999 69999999875521000 000112233444
Q ss_pred HHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
.+.++. +++ .+++++. ...+..+++|||++|.+|.++.... ..+....+.... +-..+..+|..|++|+
T Consensus 54 ~~~~l~----~~~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~ 126 (280)
T cd05581 54 VLTRLN----GHP--GIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKY-GSLDEKCTRFYAAEILLALEYLHSKGIIHR 126 (280)
T ss_pred HHHhcc----cCC--CchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 444332 122 2223222 2235679999999999998865422 123433333322 2233678999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHH--------------HHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLE--------------AFYGIYEKDADKVLQAMVQMGVLVPTGD 518 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~--------------l~~al~~~D~~~v~~~l~~lG~~~~~~D 518 (760)
|++|.||+++. ++.++++|||++..+.......-.. .......+...++.++....+..+...|
T Consensus 127 dl~~~ni~i~~--~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D 204 (280)
T cd05581 127 DLKPENILLDK--DMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSD 204 (280)
T ss_pred CCCHHHeEECC--CCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhh
Confidence 99999999985 8899999999998776543210000 0001112344556666666566666788
Q ss_pred hHHHHHHHHHHH
Q 004334 519 TTAVRRTAQFFL 530 (760)
Q Consensus 519 ~~al~~~~~~~l 530 (760)
++++...+..++
T Consensus 205 i~slG~~l~~l~ 216 (280)
T cd05581 205 LWALGCIIYQML 216 (280)
T ss_pred HHHHHHHHHHHH
Confidence 888876655443
No 170
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.39 E-value=1.9e-12 Score=138.60 Aligned_cols=185 Identities=14% Similarity=0.093 Sum_probs=113.7
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.+.||.|++|.||+|+. +++.||||+.+...... ......+|.
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~E~ 55 (309)
T cd07872 11 LEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG-----------------------------------APCTAIREV 55 (309)
T ss_pred EEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC-----------------------------------cchhHHHHH
Confidence 36799999999999998 58899999876531111 000123455
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCccccC
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHAD 453 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHaD 453 (760)
..+.++ .+..-+.+...+ ......++||||+++ .+.+.........+...+... .+-..+..+|..|++|+|
T Consensus 56 ~~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~d 129 (309)
T cd07872 56 SLLKDL----KHANIVTLHDIV-HTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRD 129 (309)
T ss_pred HHHHhC----CCCCcceEEEEE-eeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 545444 222223333333 234567999999987 555543222222333332221 222347889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~l~ 531 (760)
+||+||+++. ++.++|+|||++........... ...+...+++++.... +..+...|++++...+.+++.
T Consensus 130 lkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~t 200 (309)
T cd07872 130 LKPQNLLINE--RGELKLADFGLARAKSVPTKTYS------NEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMAS 200 (309)
T ss_pred CCHHHEEECC--CCCEEECccccceecCCCccccc------cccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence 9999999985 78999999999876543221100 0112345566665543 334566799999877766653
No 171
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.39 E-value=4.6e-12 Score=131.40 Aligned_cols=181 Identities=14% Similarity=0.133 Sum_probs=116.4
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
+.+|.|++|.||+|.. .+..+|||+..++.... ..+.+|...
T Consensus 10 ~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~-------------------------------------~~~~~e~~~ 52 (256)
T cd05059 10 KELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSE-------------------------------------DDFIEEAKV 52 (256)
T ss_pred hhhccCCCceEEEeEecCCccEEEEEeccCCCCH-------------------------------------HHHHHHHHH
Confidence 5799999999999998 56789999875531110 012234343
Q ss_pred HHHHHHhcCCCCceeeceee--eccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 378 AELFASNFKDMDYVKVPTIF--WEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy--~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
+..+ . +++ +++.+ .......+++|||++|.+|.++........+...+.... +-..+..+|..|++|+|
T Consensus 53 l~~l----~-~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d 125 (256)
T cd05059 53 MMKL----S-HPN--LVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRD 125 (256)
T ss_pred HHhC----C-CCC--EEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 4333 2 233 23333 234456799999999999998764332233433332222 22336789999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
++|.||++++ ++.++++|||++....+..... .........++++++...+..+...|++++.-.+.+++
T Consensus 126 l~p~ni~i~~--~~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~ 195 (256)
T cd05059 126 LAARNCLVGE--DNVVKVSDFGLARYVLDDQYTS-----SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVF 195 (256)
T ss_pred ccHhhEEECC--CCcEEECCcccceecccccccc-----cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHh
Confidence 9999999985 7899999999987664321100 00001123467777777677777889999987766554
No 172
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.39 E-value=3e-12 Score=132.05 Aligned_cols=117 Identities=16% Similarity=0.084 Sum_probs=81.6
Q ss_pred CCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEeccCCC-------cEEEE
Q 004334 402 TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGG-------RLIFY 472 (760)
Q Consensus 402 t~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDpHPGNILV~~~~~g-------~l~Li 472 (760)
...+++|||++|++|.++........+...+...+ +-..+..+|..|++|+|++|.||+++. ++ .++++
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~--~~~~~~~~~~~kl~ 150 (259)
T cd05037 73 DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVAR--YGLNEGYVPFIKLS 150 (259)
T ss_pred CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEec--CccccCCceeEEeC
Confidence 56799999999999998765433234444333222 223468899999999999999999985 44 69999
Q ss_pred eecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC--CCCCCCChHHHHHHHHHHH
Q 004334 473 DFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG--VLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 473 DFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG--~~~~~~D~~al~~~~~~~l 530 (760)
|||++..+..... ......+++++....+ ..+...|++++.-.+.+++
T Consensus 151 Dfg~a~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~ 200 (259)
T cd05037 151 DPGIPITVLSREE----------RVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEIC 200 (259)
T ss_pred CCCcccccccccc----------cccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHH
Confidence 9999887654111 1233445677766554 5566789999887666554
No 173
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.39 E-value=1.6e-12 Score=145.35 Aligned_cols=177 Identities=12% Similarity=0.057 Sum_probs=114.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|.. +|+.||||+... ..+.+|++
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------------------------------------------~~~~~E~~ 135 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQR------------------------------------------GGTATEAH 135 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechhh------------------------------------------hhhHHHHH
Confidence 6799999999999998 589999995221 01234555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+.++ .+..-+.+-..+ ......+++||++.| .|.+.... ...+....+.... +-..+..+|..|++|+|+
T Consensus 136 il~~l----~HpnIv~~~~~~-~~~~~~~lv~e~~~~-~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDi 208 (391)
T PHA03212 136 ILRAI----NHPSIIQLKGTF-TYNKFTCLILPRYKT-DLYCYLAA-KRNIAICDILAIERSVLRAIQYLHENRIIHRDI 208 (391)
T ss_pred HHHhC----CCCCCCCEeEEE-EECCeeEEEEecCCC-CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 55544 222223332222 334567999999975 45544321 1223333332222 223478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
||+||+++. ++.++|+|||++........... .-..+...++++++...+..++..|++++.-.+.+++.
T Consensus 209 KP~NIll~~--~~~vkL~DFG~a~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt 278 (391)
T PHA03212 209 KAENIFINH--PGDVCLGDFGAACFPVDINANKY-----YGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMAT 278 (391)
T ss_pred ChHhEEEcC--CCCEEEEeCCccccccccccccc-----ccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHH
Confidence 999999985 78999999999865432211111 01235566677777766666778899999988877764
No 174
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.39 E-value=5.1e-12 Score=132.78 Aligned_cols=184 Identities=14% Similarity=0.102 Sum_probs=116.1
Q ss_pred cccccccccEEEEEEE--CCe----eEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGE----EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~----~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~ 372 (760)
+.||.|++|.||+|+. +|+ +||||+.+...... ....+.
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~-----------------------------------~~~~~~ 57 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK-----------------------------------ANKEIL 57 (279)
T ss_pred eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHH-----------------------------------HHHHHH
Confidence 6899999999999987 454 58999876432111 111233
Q ss_pred HHHHHHHHHHHhcCCCCceeeceeee-ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCc
Q 004334 373 QEAANAELFASNFKDMDYVKVPTIFW-EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 449 (760)
Q Consensus 373 ~EA~nl~~f~~~~~~~~~V~VP~vy~-e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~Gf 449 (760)
+|...+..+ +++++ ++++. ......+++|||++|+++.+........+....+...+ +-..+..+|..|+
T Consensus 58 ~e~~~l~~~-----~~~~i--~~~~~~~~~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 130 (279)
T cd05109 58 DEAYVMAGV-----GSPYV--CRLLGICLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRL 130 (279)
T ss_pred HHHHHHHhc-----CCCCC--ceEEEEEcCCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 444444433 22333 22221 12345689999999999988754322223433333332 2334788999999
Q ss_pred cccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004334 450 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 450 fHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~ 529 (760)
+|+|+||+||++.+ ++.++|+|||++..++........ .-......++.++....+..+...|++++.-.+.++
T Consensus 131 iH~dlkp~Nil~~~--~~~~kL~dfG~~~~~~~~~~~~~~----~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el 204 (279)
T cd05109 131 VHRDLAARNVLVKS--PNHVKITDFGLARLLDIDETEYHA----DGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWEL 204 (279)
T ss_pred eccccccceEEEcC--CCcEEECCCCceeecccccceeec----CCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHH
Confidence 99999999999975 788999999999877543221000 000123456667776666667778999998766655
Q ss_pred H
Q 004334 530 L 530 (760)
Q Consensus 530 l 530 (760)
+
T Consensus 205 ~ 205 (279)
T cd05109 205 M 205 (279)
T ss_pred H
Confidence 4
No 175
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.39 E-value=3.5e-12 Score=136.00 Aligned_cols=181 Identities=17% Similarity=0.181 Sum_probs=120.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|.|++|.||+|+. +|+.|++|......... ...+.+|+.
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~------------------------------------~~~~~~e~~ 69 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK------------------------------------KELIINEIL 69 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch------------------------------------HHHHHHHHH
Confidence 5699999999999997 58999999764321110 112334444
Q ss_pred HHHHHHHhcCCCCce-eeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V-~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
.+..+ +++++ .+...+ ......++||||++|.+|.++.... ..+...+...+ +-..+..+|..|++|+|
T Consensus 70 ~l~~~-----~h~~v~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~gi~H~d 141 (296)
T cd06654 70 VMREN-----KNPNIVNYLDSY-LVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRD 141 (296)
T ss_pred HHHhC-----CCCCEeeEEEEE-EeCCEEEEeecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 44433 22322 222222 2345679999999999999875322 23333333322 22346788999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
++|.||+++. ++.++++|||+...+.+..... ....+...++++++...+...+..|++++...+.+++.
T Consensus 142 Lkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~ 211 (296)
T cd06654 142 IKSDNILLGM--DGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 211 (296)
T ss_pred CCHHHEEEcC--CCCEEECccccchhcccccccc------CcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHh
Confidence 9999999985 7899999999988765443211 11234566777887776767788999999887776653
No 176
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.38 E-value=5e-13 Score=139.23 Aligned_cols=118 Identities=16% Similarity=0.106 Sum_probs=86.1
Q ss_pred eEEEEeecCCCchhhhhhhh-hc--CCCHHHHHHHHHHHH--HHHHHh--CC--ccccCCCCCcEEEeccCCCcEEEEee
Q 004334 404 QILTMEYVPGIKINRIQSLD-EL--GVDRKRLGRYAVESY--LEQILS--HG--FFHADPHPGNIAVDDVNGGRLIFYDF 474 (760)
Q Consensus 404 ~vLVME~ieG~~L~d~~~l~-~~--g~d~~~la~~lv~~~--L~qI~~--~G--ffHaDpHPGNILV~~~~~g~l~LiDF 474 (760)
..||||+|++++|+++...- .. -+..+.+-...++.+ +..+|. .. ++|+|+||+||+++. +|.++|.||
T Consensus 95 lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~--~gvvKLGDf 172 (375)
T KOG0591|consen 95 LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTA--NGVVKLGDF 172 (375)
T ss_pred hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcC--CCceeeccc
Confidence 47999999999999976422 11 122233322222222 344454 33 999999999999986 899999999
Q ss_pred cceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004334 475 GMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 475 G~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~ 529 (760)
|+.+.++.+.. +.+-..+++.+|.++.+.-.-..+..|+++++=.++++
T Consensus 173 GL~r~l~s~~t------fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEM 221 (375)
T KOG0591|consen 173 GLGRFLSSKTT------FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEM 221 (375)
T ss_pred hhHhHhcchhH------HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHH
Confidence 99999987643 33445689999999998877778899999998766654
No 177
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.38 E-value=4.5e-12 Score=138.36 Aligned_cols=85 Identities=15% Similarity=0.092 Sum_probs=60.2
Q ss_pred HHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCh
Q 004334 440 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDT 519 (760)
Q Consensus 440 ~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~ 519 (760)
.+..+|..|++|+|++|.||+++. ++.++++|||++..+...... .. .........+++++....+..+...|+
T Consensus 191 al~~lH~~~i~H~dikp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~--~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di 264 (343)
T cd05103 191 GMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDY--VR--KGDARLPLKWMAPETIFDRVYTIQSDV 264 (343)
T ss_pred HHHHHHhCCeecCCCccCeEEEcC--CCcEEEEecccccccccCcch--hh--cCCCCCCcceECcHHhcCCCCCchhhH
Confidence 367789999999999999999985 789999999998876432110 00 011122344667777666666778899
Q ss_pred HHHHHHHHHHH
Q 004334 520 TAVRRTAQFFL 530 (760)
Q Consensus 520 ~al~~~~~~~l 530 (760)
+++...+.+++
T Consensus 265 ~slG~~l~el~ 275 (343)
T cd05103 265 WSFGVLLWEIF 275 (343)
T ss_pred HHHHHHHHHHH
Confidence 99987766554
No 178
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.38 E-value=9.5e-12 Score=129.29 Aligned_cols=186 Identities=12% Similarity=0.055 Sum_probs=117.7
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||..++-.... .+....+.+|..
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~---------------------------------~~~~~~~~~e~~ 54 (267)
T cd08228 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMD---------------------------------AKARQDCVKEID 54 (267)
T ss_pred eeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCC---------------------------------HHHHHHHHHHHH
Confidence 5799999999999998 68999999765410000 011122344554
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh---hcCCCHHHHHHHH--HHHHHHHHHhCCccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD---ELGVDRKRLGRYA--VESYLEQILSHGFFH 451 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~---~~g~d~~~la~~l--v~~~L~qI~~~GffH 451 (760)
.+..+ .+..-+.+...+ ......+++|||++|++|.++.... ....+...+.... +-..+..+|..|++|
T Consensus 55 ~l~~l----~h~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H 129 (267)
T cd08228 55 LLKQL----NHPNVIKYLDSF-IEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMH 129 (267)
T ss_pred HHHhC----CCcceeeeeeeE-EECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeC
Confidence 44444 222222222222 2235679999999999998865321 1112333322222 223467789999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|++|.||+++. ++.++++|||++..+...... .....+...+++++.......+...|++++...+.+++
T Consensus 130 ~dl~~~nil~~~--~~~~~l~d~g~~~~~~~~~~~------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~ 200 (267)
T cd08228 130 RDIKPANVFITA--TGVVKLGDLGLGRFFSSKTTA------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA 200 (267)
T ss_pred CCCCHHHEEEcC--CCCEEECccccceeccchhHH------HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHh
Confidence 999999999985 789999999998887654321 11123555667777665555566789999887666554
No 179
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.38 E-value=4.5e-12 Score=131.75 Aligned_cols=181 Identities=14% Similarity=0.123 Sum_probs=117.5
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
..||.|++|+||+|.+ .+..||+|+.+++-.. ...+.+|.+.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~-------------------------------------~~~~~~E~~~ 54 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM-------------------------------------PEAFLQEAQI 54 (260)
T ss_pred eeecCcCCCeEEEEEEcCCceEEEEEcccCCcc-------------------------------------HHHHHHHHHH
Confidence 4799999999999998 4567999987663110 0123345444
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHH---HHHHHHHHHHHHHHhCCccccC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKR---LGRYAVESYLEQILSHGFFHAD 453 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~---la~~lv~~~L~qI~~~GffHaD 453 (760)
+.++ .+...+.+...+ .....+++|||++|++|.++..... ...+... ++..++ ..+..+|..|++|+|
T Consensus 55 l~~l----~h~~i~~~~~~~--~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~-~al~~lH~~~i~H~d 127 (260)
T cd05069 55 MKKL----RHDKLVPLYAVV--SEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIA-DGMAYIERMNYIHRD 127 (260)
T ss_pred HHhC----CCCCeeeEEEEE--cCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHH-HHHHHHHhCCEeecc
Confidence 4443 233333333333 2345799999999999988764321 1123322 223333 346788999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
++|+||++++ ++.++|+|||.+..+........ ........+++++....+..+...|++++.-.+.+++
T Consensus 128 l~~~Nill~~--~~~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~ 197 (260)
T cd05069 128 LRAANILVGD--NLVCKIADFGLARLIEDNEYTAR-----QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELV 197 (260)
T ss_pred cCcceEEEcC--CCeEEECCCccceEccCCccccc-----CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHH
Confidence 9999999986 78999999999987654321110 0011234466677766666777789999987776654
No 180
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.38 E-value=3.7e-12 Score=132.77 Aligned_cols=194 Identities=14% Similarity=0.173 Sum_probs=119.6
Q ss_pred ChhhhhcccCccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHH
Q 004334 288 PLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYD 365 (760)
Q Consensus 288 ~~~~iF~~fd~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~ 365 (760)
+++..|... +.+|.|++|+||+|.. +++.||||+....-..
T Consensus 3 ~~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~----------------------------------- 45 (272)
T cd06637 3 DPAGIFELV--ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE----------------------------------- 45 (272)
T ss_pred ChhhhhhHH--HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc-----------------------------------
Confidence 344555432 5799999999999998 5899999986432100
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCceeeceeeecc-----CCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHH--H
Q 004334 366 ECASVLYQEAANAELFASNFKDMDYVKVPTIFWEY-----TTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--V 437 (760)
Q Consensus 366 E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~-----st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~l--v 437 (760)
...+.+|...+.++. .+..-+.+...+... ....+++|||++|++|.++..... ..+....+.... +
T Consensus 46 --~~~~~~e~~~l~~~~---~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi 120 (272)
T cd06637 46 --EEEIKQEINMLKKYS---HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREI 120 (272)
T ss_pred --HHHHHHHHHHHHHhc---CCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 011223333333331 112223333333221 234689999999999998754322 223333322222 2
Q ss_pred HHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CC
Q 004334 438 ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GV 512 (760)
Q Consensus 438 ~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-----G~ 512 (760)
-..+..+|..|++|+|+||.||++++ ++.++|+|||++..+....... ....+...++++++... +.
T Consensus 121 ~~~l~~LH~~~ivh~dl~~~nili~~--~~~~~l~Dfg~~~~~~~~~~~~------~~~~g~~~y~aPE~~~~~~~~~~~ 192 (272)
T cd06637 121 LRGLSHLHQHKVIHRDIKGQNVLLTE--NAEVKLVDFGVSAQLDRTVGRR------NTFIGTPYWMAPEVIACDENPDAT 192 (272)
T ss_pred HHHHHHHHHCCCccCCCCHHHEEECC--CCCEEEccCCCceecccccccC------CcccccccccCHhHhccccCcCCC
Confidence 23468899999999999999999986 7899999999988765432211 11224455667776642 23
Q ss_pred CCCCCChHHHHHHHHHHHH
Q 004334 513 LVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 513 ~~~~~D~~al~~~~~~~l~ 531 (760)
.+...|++++...+.+++.
T Consensus 193 ~~~~~Dv~slGv~l~el~~ 211 (272)
T cd06637 193 YDFKSDLWSLGITAIEMAE 211 (272)
T ss_pred CCchhhHHHHHHHHHHHHh
Confidence 4556899999877766653
No 181
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.38 E-value=5.3e-12 Score=141.66 Aligned_cols=86 Identities=14% Similarity=0.064 Sum_probs=61.8
Q ss_pred HHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004334 439 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 518 (760)
Q Consensus 439 ~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D 518 (760)
..+..+|..|++|+|++|.||++++ ++.++|+|||++..+........ .....+...+++++....+..++..|
T Consensus 248 ~aL~~LH~~~ivH~dikp~Nill~~--~~~~kL~DfGla~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~D 321 (400)
T cd05105 248 RGMEFLASKNCVHRDLAARNVLLAQ--GKIVKICDFGLARDIMHDSNYVS----KGSTFLPVKWMAPESIFDNLYTTLSD 321 (400)
T ss_pred HHHHHHHhCCeeCCCCChHhEEEeC--CCEEEEEeCCcceeccccccccc----cCCcCCCcceEChhhhcCCCCCchhh
Confidence 3467899999999999999999986 78899999999887643321100 00011223467777776666778899
Q ss_pred hHHHHHHHHHHH
Q 004334 519 TTAVRRTAQFFL 530 (760)
Q Consensus 519 ~~al~~~~~~~l 530 (760)
++++...+.+++
T Consensus 322 iwSlGvil~ell 333 (400)
T cd05105 322 VWSYGILLWEIF 333 (400)
T ss_pred HHHHHHHHHHHH
Confidence 999987776654
No 182
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.38 E-value=4.1e-12 Score=131.44 Aligned_cols=176 Identities=16% Similarity=0.148 Sum_probs=116.7
Q ss_pred cccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
+.+|.|++|+||++..+|+.||+|+.+.... ...+.+|...+
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~--------------------------------------~~~~~~e~~~l 53 (254)
T cd05083 12 EIIGEGEFGAVLQGEYTGQKVAVKNIKCDVT--------------------------------------AQAFLEETAVM 53 (254)
T ss_pred eeeccCCCCceEecccCCCceEEEeecCcch--------------------------------------HHHHHHHHHHH
Confidence 6799999999999998999999998654210 01233444444
Q ss_pred HHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhc-CCCHHHH---HHHHHHHHHHHHHhCCccccCC
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL-GVDRKRL---GRYAVESYLEQILSHGFFHADP 454 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~-g~d~~~l---a~~lv~~~L~qI~~~GffHaDp 454 (760)
.++ .+...+.+...+. ....+++|||++|++|.++...... ..+...+ +..++ ..+..+|..|++|+|+
T Consensus 54 ~~~----~~~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~-~al~~lH~~~~~H~dl 126 (254)
T cd05083 54 TKL----HHKNLVRLLGVIL--HNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVA-EGMEYLESKKLVHRDL 126 (254)
T ss_pred HhC----CCCCcCeEEEEEc--CCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHH-HHHHHHHhCCeecccc
Confidence 433 2222333333332 3456999999999999987643321 2333333 22333 3367899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|+||+++. ++.++|+|||.+......... ......+++++....+..+...|++++.-.+.+++
T Consensus 127 ~p~nili~~--~~~~kl~Dfg~~~~~~~~~~~---------~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~ 191 (254)
T cd05083 127 AARNILVSE--DGVAKVSDFGLARVGSMGVDN---------SKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVF 191 (254)
T ss_pred CcceEEEcC--CCcEEECCCccceeccccCCC---------CCCCceecCHHHhccCCcCchhhHHHHHHHHHHHH
Confidence 999999985 789999999998765432110 11123456666666666777889999987776655
No 183
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.38 E-value=3.8e-12 Score=136.29 Aligned_cols=190 Identities=17% Similarity=0.167 Sum_probs=120.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||...+..... ......+..|..
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~~~~~e~~ 53 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIK---------------------------------RNKVKRVLTEQE 53 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccch---------------------------------HHHHHHHHHHHH
Confidence 5799999999999999 48999999876531110 011122345555
Q ss_pred HHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhCCccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSHGFFH 451 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~l--v~~~L~qI~~~GffH 451 (760)
.+.++. ++ .+++++. ......+++|||++|.+|.++..... ..++.......+ +-..+..+|..|++|
T Consensus 54 ~l~~l~-----~~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 126 (316)
T cd05574 54 ILATLD-----HP--FLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVY 126 (316)
T ss_pred HHHhCC-----CC--CchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 555442 22 2334333 33456799999999999998754221 223333332222 223467899999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHH----------------HHH-------HHhhcCHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLE----------------AFY-------GIYEKDADKVLQAMV 508 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~----------------l~~-------al~~~D~~~v~~~l~ 508 (760)
+|+||.||+++. ++.++|.|||++...+......... ... ....++..++++++.
T Consensus 127 ~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~ 204 (316)
T cd05574 127 RDLKPENILLHE--SGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVI 204 (316)
T ss_pred cCCChHHeEEcC--CCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHH
Confidence 999999999986 7899999999987765432111000 000 001234456777777
Q ss_pred HcCCCCCCCChHHHHHHHHHHH
Q 004334 509 QMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 509 ~lG~~~~~~D~~al~~~~~~~l 530 (760)
.-+..+...|++++...+.+++
T Consensus 205 ~~~~~~~~~Di~slG~ll~~l~ 226 (316)
T cd05574 205 SGDGHGSAVDWWTLGILLYEML 226 (316)
T ss_pred cCCCCCchHHHHHHHHHHHHHh
Confidence 6666677789999988776654
No 184
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.38 E-value=7.3e-12 Score=130.35 Aligned_cols=182 Identities=23% Similarity=0.235 Sum_probs=115.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||+|++|.||+|+. +|+.||+|+.+....... ..+.+|+.
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~------------------------------------~~~~~e~~ 58 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDF------------------------------------SLIQQEIF 58 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCccchH------------------------------------HHHHHHHH
Confidence 6799999999999998 689999999865321110 11234554
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHH---HHHHHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLG---RYAVESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la---~~lv~~~L~qI~~~GffHaD 453 (760)
.+.++ .+..-+.+...+ ......++||||++|++|.++.... ...+...+. ..++ ..+..+|..|++|+|
T Consensus 59 ~l~~~----~h~~ii~~~~~~-~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~-~~l~~lH~~~i~H~d 131 (267)
T cd06646 59 MVKEC----KHCNIVAYFGSY-LSREKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETL-QGLAYLHSKGKMHRD 131 (267)
T ss_pred HHHhc----CCCCeeeeeEEE-EeCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHH-HHHHHHHHCCccccC
Confidence 44443 222222222222 2235678999999999998865322 223333322 2223 346788999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cCCCCCCCChHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~---lG~~~~~~D~~al~~~~~~~l 530 (760)
++|+||+++. ++.++++|||++..+....... ....+...+++++... .+..+...|++++.-.+.+++
T Consensus 132 l~p~nill~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~ 203 (267)
T cd06646 132 IKGANILLTD--NGDVKLADFGVAAKITATIAKR------KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELA 203 (267)
T ss_pred CCHHHEEECC--CCCEEECcCccceeeccccccc------CccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHH
Confidence 9999999985 7889999999998775332110 0012344566666652 233455689999987766654
Q ss_pred H
Q 004334 531 N 531 (760)
Q Consensus 531 ~ 531 (760)
.
T Consensus 204 ~ 204 (267)
T cd06646 204 E 204 (267)
T ss_pred h
Confidence 3
No 185
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.38 E-value=9.7e-12 Score=128.91 Aligned_cols=182 Identities=20% Similarity=0.186 Sum_probs=113.1
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+++|.|++|+||+|+. +|+.||||+.+...... .... ..+..|..
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~--------------------------------~~~~-~~~~~e~~ 48 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIA--------------------------------KNQV-TNVKAERA 48 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhH--------------------------------HHHH-HHHHHHHH
Confidence 4799999999999998 58999999865320000 0000 01111211
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+. ....+...+.+...+ +.....+++|||++|++|.++.... ...+...+...+ +-..+..+|..|++|+|+
T Consensus 49 ~~~---~~~~~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl 123 (260)
T cd05611 49 IMM---IQGESPYVAKLYYSF-QSKDYLYLVMEYLNGGDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDI 123 (260)
T ss_pred HHh---hcCCCCCeeeeeeeE-EcCCeEEEEEeccCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 111 111222223333222 2235679999999999999875322 123333332222 223467899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|.||+++. ++.++|+|||+....... ....++..+++++....+......|++++...+.+++
T Consensus 124 ~p~nil~~~--~~~~~l~dfg~~~~~~~~----------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~ 187 (260)
T cd05611 124 KPENLLIDQ--TGHLKLTDFGLSRNGLEN----------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFL 187 (260)
T ss_pred CHHHeEECC--CCcEEEeecccceecccc----------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHH
Confidence 999999985 789999999988765431 1123455566777666555567789999987776654
No 186
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.38 E-value=5e-12 Score=133.10 Aligned_cols=183 Identities=14% Similarity=0.124 Sum_probs=117.6
Q ss_pred cccccccccEEEEEEE------CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l------~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~ 372 (760)
+.||.|++|+||+|+. .++.|++|..++.... +....+.
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~-----------------------------------~~~~~~~ 55 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNP-----------------------------------QQWGEFQ 55 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCH-----------------------------------HHHHHHH
Confidence 5799999999999985 3578999976542110 0111234
Q ss_pred HHHHHHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhc----------------CCCHHH---
Q 004334 373 QEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDEL----------------GVDRKR--- 431 (760)
Q Consensus 373 ~EA~nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~----------------g~d~~~--- 431 (760)
+|+..+.++. + ++ +++++. ......+++|||++|++|.++...... .++...
T Consensus 56 ~E~~~l~~l~----h-~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (283)
T cd05090 56 QEASLMAELH----H-PN--IVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLH 128 (283)
T ss_pred HHHHHHhhCC----C-CC--eeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHH
Confidence 4555555442 2 22 233332 234567999999999999887532211 122222
Q ss_pred HHHHHHHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC
Q 004334 432 LGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG 511 (760)
Q Consensus 432 la~~lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG 511 (760)
++..++ ..+..+|..|++|+|++|.||++++ ++.++|.|||++..+........ ......+..+++++....+
T Consensus 129 i~~~i~-~al~~lH~~~i~H~dlkp~nili~~--~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~ 201 (283)
T cd05090 129 IAIQIA-AGMEYLSSHFFVHKDLAARNILIGE--QLHVKISDLGLSREIYSADYYRV----QPKSLLPIRWMPPEAIMYG 201 (283)
T ss_pred HHHHHH-HHHHHHHhcCeehhccccceEEEcC--CCcEEeccccccccccCCcceec----ccCCCccceecChHHhccC
Confidence 222233 3478899999999999999999985 78899999999987644321110 0111123456777777666
Q ss_pred CCCCCCChHHHHHHHHHHH
Q 004334 512 VLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 512 ~~~~~~D~~al~~~~~~~l 530 (760)
..++..|++++.-.+.+++
T Consensus 202 ~~~~~~Dv~slG~il~el~ 220 (283)
T cd05090 202 KFSSDSDIWSFGVVLWEIF 220 (283)
T ss_pred CCCchhhhHHHHHHHHHHH
Confidence 6778899999987776655
No 187
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.38 E-value=3.8e-12 Score=136.79 Aligned_cols=185 Identities=13% Similarity=0.102 Sum_probs=117.9
Q ss_pred ccccccccccEEEEEEE--CCe----eEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGE----EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~----~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
.+.||+|++|+||+|++ +|+ .||||+.++..... ....+
T Consensus 12 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~ 56 (316)
T cd05108 12 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-----------------------------------ANKEI 56 (316)
T ss_pred eeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHH-----------------------------------HHHHH
Confidence 36899999999999987 444 48999876521111 11123
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeee-ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFW-EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 448 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~-e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~G 448 (760)
.+|+..+..+ .+ ++ +.+.+. ......+++|||++++++.+.........+...+.... +...+..+|..|
T Consensus 57 ~~e~~~l~~l----~h-~n--iv~~~g~~~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 129 (316)
T cd05108 57 LDEAYVMASV----DN-PH--VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR 129 (316)
T ss_pred HHHHHHHHhC----CC-CC--CCeEEEEEcCCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 3455444443 22 22 223332 12345689999999999988754333233443333322 223478899999
Q ss_pred ccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004334 449 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 528 (760)
Q Consensus 449 ffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~ 528 (760)
++|+|+||.||+++. ++.++|+|||++..+.......-. ........+++++....+..+...|++++.-.+.+
T Consensus 130 iiH~dlkp~Nill~~--~~~~kl~DfG~a~~~~~~~~~~~~----~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~e 203 (316)
T cd05108 130 LVHRDLAARNVLVKT--PQHVKITDFGLAKLLGADEKEYHA----EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWE 203 (316)
T ss_pred eeccccchhheEecC--CCcEEEccccccccccCCCcceec----cCCccceeecChHHhccCCCCchhhhHHHHHHHHH
Confidence 999999999999985 789999999999887643321100 00011234667777666667778899999877766
Q ss_pred HH
Q 004334 529 FL 530 (760)
Q Consensus 529 ~l 530 (760)
++
T Consensus 204 l~ 205 (316)
T cd05108 204 LM 205 (316)
T ss_pred HH
Confidence 54
No 188
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.38 E-value=4.6e-12 Score=131.21 Aligned_cols=183 Identities=14% Similarity=0.152 Sum_probs=121.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
++||.|++|.||+|+. +|+.|++|+........ ....+.+.+|.+
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---------------------------------~~~~~~~~~e~~ 52 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE---------------------------------KGSVRNVLNERR 52 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc---------------------------------hhHHHHHHHHHH
Confidence 6899999999999999 48999999875421000 000112334444
Q ss_pred HHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~~GffHa 452 (760)
.++++ ++++ +++++. ......+++|||++|.+|.+..... ...+...+...+. -..+..+|..|++|+
T Consensus 53 ~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~ 124 (258)
T cd05578 53 ILQEL-----NHPF--LVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIHR 124 (258)
T ss_pred HHHhC-----CCCC--hHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 44443 1222 222221 2234579999999999998865433 2344444333322 233778899999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
|++|.||+++. ++.++|+|||....+..... .....++..+++++.......+...|++++...+.+++.
T Consensus 125 dl~~~nil~~~--~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~ 194 (258)
T cd05578 125 DIKPDNILLDE--QGHVHITDFNIATKVTPDTL-------TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLR 194 (258)
T ss_pred CCCHHHeEEcC--CCCEEEeecccccccCCCcc-------ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHh
Confidence 99999999986 88999999999887765431 111235666777887766666778899999877766553
No 189
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.38 E-value=5.1e-12 Score=130.00 Aligned_cols=188 Identities=18% Similarity=0.113 Sum_probs=117.9
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.+.||.|++|+||+|+. +|+.|++|+....-.... ..+..+.+.+|.
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~-------------------------------~~~~~~~~~~e~ 53 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQT-------------------------------GQEAVKQLEQEI 53 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEcccccc-------------------------------chHHHHHHHHHH
Confidence 36799999999999998 589999998754211100 011112234454
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
.-+..+ .+..-+.+.... ......+++|||++|.+|.++..... ..+...+...+ +-..+..+|..|++|+|
T Consensus 54 ~~l~~~----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 127 (258)
T cd06632 54 ALLSKL----QHPNIVQYLGTE-REEDNLYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDRNTVHRD 127 (258)
T ss_pred HHHHhc----CCCCchheeeeE-ecCCeEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 444443 222222222222 23356799999999999988753221 13333322221 22346788999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC-CCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV-LVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~-~~~~~D~~al~~~~~~~l~ 531 (760)
++|+||+++. ++.++|+|||+...+..... .....++..++.++....+. .+...|++++...+.+++.
T Consensus 128 l~~~ni~~~~--~~~~kl~d~~~~~~~~~~~~-------~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~ 197 (258)
T cd06632 128 IKGANILVDT--NGVVKLADFGMAKQVVEFSF-------AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMAT 197 (258)
T ss_pred CCHHHEEECC--CCCEEEccCccceecccccc-------ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHh
Confidence 9999999985 78999999999887654431 01122445566666665444 5667899998877665543
No 190
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.38 E-value=6.5e-12 Score=130.75 Aligned_cols=182 Identities=21% Similarity=0.206 Sum_probs=116.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|+. +|+.||+|+.+....... ..+.+|..
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~------------------------------------~~~~~e~~ 58 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDF------------------------------------AVVQQEII 58 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHH------------------------------------HHHHHHHH
Confidence 5799999999999998 589999999765321110 01223333
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~~GffHaDp 454 (760)
.+..+ .+..-+.+...+ ......+++|||++|++|.++.... ...+...+..... -..+..+|..|++|+|+
T Consensus 59 ~~~~l----~h~~ii~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 132 (267)
T cd06645 59 MMKDC----KHSNIVAYFGSY-LRRDKLWICMEFCGGGSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLHSKGKMHRDI 132 (267)
T ss_pred HHHhC----CCCCeeeEEEEE-EeCCEEEEEEeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 33322 222223333322 2345679999999999999865322 1234333333222 23367889999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~---lG~~~~~~D~~al~~~~~~~l 530 (760)
+|.||+++. ++.++|+|||++..+....... ....++..+++++... .+......|++++.-.+.+++
T Consensus 133 kp~nili~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~ 203 (267)
T cd06645 133 KGANILLTD--NGHVKLADFGVSAQITATIAKR------KSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELA 203 (267)
T ss_pred CHHHEEECC--CCCEEECcceeeeEccCccccc------ccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHh
Confidence 999999985 7899999999988765332110 0112455667777653 344566789999987665543
No 191
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.38 E-value=7.8e-12 Score=129.75 Aligned_cols=182 Identities=16% Similarity=0.147 Sum_probs=119.3
Q ss_pred cccccccEEEEEEEC--CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 301 IAAASLGQVHRARLK--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 301 IasaSiGQVhrA~l~--G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
||.|++|.||+|+.. |+.|+||+..+..... .+....+.+|...+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~---------------------------------~~~~~~~~~e~~~l 47 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVE---------------------------------TGQQEHIFSEKEIL 47 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchh---------------------------------hhHHHHHHHHHHHH
Confidence 688999999999994 8999999876521000 01122345565555
Q ss_pred HHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCCCC
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHP 456 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDpHP 456 (760)
.++ .+..-+.+...+ ......+++|||++|++|.++..... ......+...+ +-..++.+|..|++|+|++|
T Consensus 48 ~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~ 121 (262)
T cd05572 48 EEC----NHPFIVKLYRTF-KDKKYIYMLMEYCLGGELWTILRDRG-LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKP 121 (262)
T ss_pred HhC----CCCCEeeeeeeE-EcCCccEEEEecCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCH
Confidence 444 222222222222 33456799999999999988653221 23333332222 23347889999999999999
Q ss_pred CcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 457 GNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 457 GNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
.||+++. ++.++|+|||.+..+...... ....++..++.++.......+...|++++.-.+.+++
T Consensus 122 ~nilv~~--~~~~~l~df~~~~~~~~~~~~-------~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~ 186 (262)
T cd05572 122 ENLLLDS--NGYVKLVDFGFAKKLKSGQKT-------WTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELL 186 (262)
T ss_pred HHEEEcC--CCCEEEeeCCcccccCccccc-------ccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHH
Confidence 9999985 889999999999888665311 0112455667777766555667789999987766654
No 192
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.37 E-value=2.2e-12 Score=147.35 Aligned_cols=178 Identities=13% Similarity=0.034 Sum_probs=116.9
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..||.|++|.||+|++ .++.||||..... ...+|++
T Consensus 175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~------------------------------------------~~~~E~~ 212 (461)
T PHA03211 175 RALTPGSEGCVFESSHPDYPQRVVVKAGWYA------------------------------------------SSVHEAR 212 (461)
T ss_pred EEEccCCCeEEEEEEECCCCCEEEEeccccc------------------------------------------CHHHHHH
Confidence 5799999999999999 4899999942110 0124555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~~GffHaDp 454 (760)
.+.++ .+..-|.+-.++ ......+|+||++.| .+.++.......++...+...+. -..+..+|..|++|+|+
T Consensus 213 iL~~L----~HpnIv~l~~~~-~~~~~~~lv~e~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDL 286 (461)
T PHA03211 213 LLRRL----SHPAVLALLDVR-VVGGLTCLVLPKYRS-DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDI 286 (461)
T ss_pred HHHHC----CCCCCCcEEEEE-EECCEEEEEEEccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcC
Confidence 55554 222222222222 334567999999976 55554322222344444333322 23478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
||.|||++. ++.++|+|||++..+........ .....+...++++++..-+..+...|++++...+.+++
T Consensus 287 KP~NILl~~--~~~vkL~DFGla~~~~~~~~~~~----~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~ 356 (461)
T PHA03211 287 KTENVLVNG--PEDICLGDFGAACFARGSWSTPF----HYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAA 356 (461)
T ss_pred CHHHEEECC--CCCEEEcccCCceeccccccccc----ccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHH
Confidence 999999985 78999999999887654321111 11124667788888887666777889999998877664
No 193
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.37 E-value=5.1e-12 Score=134.17 Aligned_cols=185 Identities=19% Similarity=0.193 Sum_probs=117.8
Q ss_pred cccccccccEEEEEEEC--------------C--eeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHH
Q 004334 299 EPIAAASLGQVHRARLK--------------G--EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVA 362 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~--------------G--~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~ 362 (760)
+.||.|++|.||+|+.. | ..||||+.+++....
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------- 59 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKT------------------------------- 59 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHH-------------------------------
Confidence 57999999999999862 1 258999988753221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhc-----------CCCH
Q 004334 363 IYDECASVLYQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDEL-----------GVDR 429 (760)
Q Consensus 363 i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~-----------g~d~ 429 (760)
....+.+|.+.+.++. + ++ +++++. ......+++|||++|.+|.++...... ..+.
T Consensus 60 ----~~~~~~~ei~~l~~l~----h-~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 128 (295)
T cd05097 60 ----ARNDFLKEIKIMSRLK----N-PN--IIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSI 128 (295)
T ss_pred ----HHHHHHHHHHHHHhCC----C-CC--cCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccH
Confidence 1112345555555542 2 22 333332 234567999999999999987532210 1222
Q ss_pred HHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHH
Q 004334 430 KRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAM 507 (760)
Q Consensus 430 ~~la~~l--v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l 507 (760)
..+...+ +...+..+|..|++|+|+||+||++++ ++.++|+|||++..+....... ..+.......+++++.
T Consensus 129 ~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~ 202 (295)
T cd05097 129 ANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGN--HYTIKIADFGMSRNLYSGDYYR----IQGRAVLPIRWMAWES 202 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcC--CCcEEecccccccccccCccee----ccCcCcCceeecChhh
Confidence 2222222 223367889999999999999999985 7899999999987664322100 0011112345667777
Q ss_pred HHcCCCCCCCChHHHHHHHHHHHH
Q 004334 508 VQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 508 ~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
...+..+...|++++.-.+.+++.
T Consensus 203 ~~~~~~~~~~DvwSlG~~l~el~~ 226 (295)
T cd05097 203 ILLGKFTTASDVWAFGVTLWEMFT 226 (295)
T ss_pred hccCCcCchhhHHHHHHHHHHHHH
Confidence 666777888999999887766653
No 194
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.37 E-value=1.9e-12 Score=144.51 Aligned_cols=175 Identities=15% Similarity=0.171 Sum_probs=126.3
Q ss_pred cccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
+=+|+|+-|.|++|++.++.||||-.+ +.-+.| .+++
T Consensus 130 eWlGSGaQGAVF~Grl~netVAVKKV~----elkETd---------------------------------------IKHL 166 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLHNETVAVKKVR----ELKETD---------------------------------------IKHL 166 (904)
T ss_pred hhhccCcccceeeeeccCceehhHHHh----hhhhhh---------------------------------------HHHH
Confidence 459999999999999999999999422 222223 2333
Q ss_pred HHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCccccCCCC
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHADPHP 456 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHaDpHP 456 (760)
+++ ++.+.|.+-.|.. -+--.+++||||.-+.|..++...+ .+.+..++.. .+..-++++|.|.++|+|+|.
T Consensus 167 RkL----kH~NII~FkGVCt-qsPcyCIiMEfCa~GqL~~VLka~~-~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKS 240 (904)
T KOG4721|consen 167 RKL----KHPNIITFKGVCT-QSPCYCIIMEFCAQGQLYEVLKAGR-PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKS 240 (904)
T ss_pred Hhc----cCcceeeEeeeec-CCceeEEeeeccccccHHHHHhccC-ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCC
Confidence 333 2222233322221 1122489999999999998765332 3566666654 344558889999999999999
Q ss_pred CcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 457 GNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 457 GNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
-||||.. +..+++.|||-...+++... .+ -+.++...|++++++..-..+.+|+++|...+-++|.
T Consensus 241 PNiLIs~--~d~VKIsDFGTS~e~~~~ST----kM---SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT 306 (904)
T KOG4721|consen 241 PNILISY--DDVVKISDFGTSKELSDKST----KM---SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLT 306 (904)
T ss_pred CceEeec--cceEEeccccchHhhhhhhh----hh---hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHh
Confidence 9999986 77899999999988876521 11 1357889999999999999999999999988766654
No 195
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.37 E-value=1.1e-11 Score=132.74 Aligned_cols=182 Identities=15% Similarity=0.156 Sum_probs=113.1
Q ss_pred cccccccccEEEEEEE--CCeeE--EEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEV--VVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~V--AVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E 374 (760)
+.||.|++|+||+|++ +|..+ ++|.......+ .....+.+|
T Consensus 13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~-----------------------------------~~~~~~~~E 57 (303)
T cd05088 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK-----------------------------------DDHRDFAGE 57 (303)
T ss_pred eeecCCCCceEEEEEEccCCceeeEEEEEecccCCH-----------------------------------HHHHHHHHH
Confidence 6799999999999998 46554 55543331111 111223445
Q ss_pred HHHHHHHHHhcCCCCceeeceee--eccCCCeEEEEeecCCCchhhhhhhhh---------------cCCCHHHHHHHH-
Q 004334 375 AANAELFASNFKDMDYVKVPTIF--WEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRKRLGRYA- 436 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~V~VP~vy--~e~st~~vLVME~ieG~~L~d~~~l~~---------------~g~d~~~la~~l- 436 (760)
...+.++. ++++ +++++ .......+++|||++|++|.++..... ..++...+...+
T Consensus 58 i~~l~~l~----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 131 (303)
T cd05088 58 LEVLCKLG----HHPN--IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 131 (303)
T ss_pred HHHHHHhc----CCCC--cceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHH
Confidence 55555442 2332 33333 234456799999999999988653221 112333332222
Q ss_pred -HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCC
Q 004334 437 -VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVP 515 (760)
Q Consensus 437 -v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~ 515 (760)
+-..+..+|..|++|+|++|.||+++. ++.++|+|||++.......... .......+++++.......++
T Consensus 132 qi~~al~~LH~~gi~H~dlkp~Nili~~--~~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~ 202 (303)
T cd05088 132 DVARGMDYLSQKQFIHRDLAARNILVGE--NYVAKIADFGLSRGQEVYVKKT-------MGRLPVRWMAIESLNYSVYTT 202 (303)
T ss_pred HHHHHHHHHHhCCccccccchheEEecC--CCcEEeCccccCcccchhhhcc-------cCCCcccccCHHHHhccCCcc
Confidence 223468899999999999999999985 7899999999886432111100 001123456677666666677
Q ss_pred CCChHHHHHHHHHHH
Q 004334 516 TGDTTAVRRTAQFFL 530 (760)
Q Consensus 516 ~~D~~al~~~~~~~l 530 (760)
..|+++++-.+.+++
T Consensus 203 ~~Di~slG~il~ell 217 (303)
T cd05088 203 NSDVWSYGVLLWEIV 217 (303)
T ss_pred cccchhhhhHHHHHH
Confidence 899999988777665
No 196
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.37 E-value=5.8e-12 Score=137.51 Aligned_cols=86 Identities=15% Similarity=0.064 Sum_probs=63.9
Q ss_pred HHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004334 439 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 518 (760)
Q Consensus 439 ~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D 518 (760)
..+..+|..|++|+|+||.||+++. ++.++|+|||++..+....... -.........+++++...-+..++..|
T Consensus 184 ~aL~~lH~~~ivHrDikp~Nill~~--~~~vkL~DfG~a~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~D 257 (337)
T cd05054 184 RGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYV----RKGDARLPLKWMAPESIFDKVYTTQSD 257 (337)
T ss_pred HHHHHHHhCCeecCCCCcceEEEeC--CCcEEEeccccchhcccCcchh----hccCCCCCccccCcHHhcCCCCCcccc
Confidence 3478899999999999999999986 7899999999998875432110 011122234577788777777788899
Q ss_pred hHHHHHHHHHHH
Q 004334 519 TTAVRRTAQFFL 530 (760)
Q Consensus 519 ~~al~~~~~~~l 530 (760)
++++.-.+.+++
T Consensus 258 i~SlGv~l~el~ 269 (337)
T cd05054 258 VWSFGVLLWEIF 269 (337)
T ss_pred HHHHHHHHHHHH
Confidence 999988776654
No 197
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.37 E-value=7.5e-12 Score=130.14 Aligned_cols=181 Identities=14% Similarity=0.112 Sum_probs=116.5
Q ss_pred cccccccccEEEEEEEC-CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK-GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~-G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
+.+|.|++|.||.|... +..||||..+++-.. ...+.+|...
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~-------------------------------------~~~~~~e~~~ 52 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-------------------------------------EDEFIEEAKV 52 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCCccc-------------------------------------HHHHHHHHHH
Confidence 46999999999999984 557999976542110 0112345444
Q ss_pred HHHHHHhcCCCCceeeceeeec--cCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCccccC
Q 004334 378 AELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGFFHAD 453 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e--~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~~GffHaD 453 (760)
+.++ . ++ .+++.+.. .....+++|||++|++|.++........+...+..... -..+..+|..|++|+|
T Consensus 53 l~~l----~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 125 (256)
T cd05113 53 MMKL----S-HE--KLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRD 125 (256)
T ss_pred HhcC----C-CC--CeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence 4443 2 22 23444432 23456999999999999887543222344444333322 2336789999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+||+||++++ ++.++++|||....+....-... ........+..++....+......|++++.-.+.+++
T Consensus 126 l~p~nili~~--~~~~kl~d~g~~~~~~~~~~~~~-----~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~ 195 (256)
T cd05113 126 LAARNCLVDD--QGCVKVSDFGLSRYVLDDEYTSS-----VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVY 195 (256)
T ss_pred cCcceEEEcC--CCCEEECCCccceecCCCceeec-----CCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHh
Confidence 9999999985 78999999999876643211000 0011234456677776666677889999987766554
No 198
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.37 E-value=7.9e-12 Score=130.45 Aligned_cols=182 Identities=15% Similarity=0.127 Sum_probs=117.6
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
+.+|.|++|.||+|++ ++..||||+.++.... ...+.+|...
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~-------------------------------------~~~~~~E~~~ 54 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-------------------------------------PEAFLQEAQV 54 (262)
T ss_pred eecCCCCCCcEEEEEecCCceEEEEecccCccC-------------------------------------HHHHHHHHHH
Confidence 4699999999999998 4567999987652110 0123345555
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
+.++. +..-+.+...+ .....+++|||++|++|.++..... ...+...+.... +-..+..+|..|++|+|+
T Consensus 55 l~~l~----~~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl 128 (262)
T cd05071 55 MKKLR----HEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 128 (262)
T ss_pred HHhCC----CCCcceEEEEE--CCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence 55542 22222222222 2345699999999999988764321 123333332222 223367899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|+||++++ ++.++|+|||.+..++....... ....++..++.++....+..+...|++++...+.+++
T Consensus 129 ~p~Nill~~--~~~~~L~dfg~~~~~~~~~~~~~-----~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ell 197 (262)
T cd05071 129 RAANILVGE--NLVCKVADFGLARLIEDNEYTAR-----QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 197 (262)
T ss_pred CcccEEEcC--CCcEEeccCCceeeccccccccc-----cCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHH
Confidence 999999986 78999999999987764432110 0112344567777776666777889999988776654
No 199
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.37 E-value=1.7e-12 Score=140.34 Aligned_cols=183 Identities=19% Similarity=0.225 Sum_probs=123.1
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|.|.+|.|-+|+. .|+.||||..+.+--+. ..|++. +++|.+
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkd-------------------------eqDlvh--------IRREIe 105 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKD-------------------------EQDLVH--------IRREIE 105 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhccc-------------------------HHHHHH--------HHHHHH
Confidence 4799999999999998 59999999766531111 123333 345555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH---HHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA---VESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l---v~~~L~qI~~~GffHaD 453 (760)
.|..+ .+...+.|..|+ +..++.||||||..|+.|.|+..-... +. .+-++.. +-..+++.|.++++|+|
T Consensus 106 IMSsL----NHPhII~IyEVF-ENkdKIvivMEYaS~GeLYDYiSer~~-Ls-ErEaRhfFRQIvSAVhYCHknrVvHRD 178 (668)
T KOG0611|consen 106 IMSSL----NHPHIIQIYEVF-ENKDKIVIVMEYASGGELYDYISERGS-LS-EREARHFFRQIVSAVHYCHKNRVVHRD 178 (668)
T ss_pred HHhhc----CCCceeehhhhh-cCCceEEEEEEecCCccHHHHHHHhcc-cc-HHHHHHHHHHHHHHHHHHhhccceecc
Confidence 55544 222334555555 567788999999999999998753321 11 1122222 22335667899999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~l 530 (760)
+|-.|||++. ++.+++.|||+.-.+.+. .|++.|. +.+-++.++++.- -+..|.+|-+++...++-++
T Consensus 179 LKLENILLD~--N~NiKIADFGLSNly~~~---kfLqTFC----GSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLV 247 (668)
T KOG0611|consen 179 LKLENILLDQ--NNNIKIADFGLSNLYADK---KFLQTFC----GSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLV 247 (668)
T ss_pred cchhheeecC--CCCeeeeccchhhhhccc---cHHHHhc----CCcccCCccccCCCCCCCCccchhhHHHHHHHHh
Confidence 9999999986 889999999998877543 3444444 4566666666543 24567889999987665544
No 200
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.37 E-value=3.1e-12 Score=136.27 Aligned_cols=182 Identities=16% Similarity=0.193 Sum_probs=115.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..||.|++|.||++.. +|+.||||...-.... ....+.+|..
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~------------------------------------~~~~~~~e~~ 71 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQ------------------------------------RRELLFNEVV 71 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchHH------------------------------------HHHHHHHHHH
Confidence 4699999999999998 5899999975321100 0111233433
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+..+ .+..-+.+...+ ......+++|||++|.++.++.... ..+...+.... +-..+..+|..|++|+|+
T Consensus 72 ~l~~l----~h~~ii~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dl 144 (292)
T cd06658 72 IMRDY----HHENVVDMYNSY-LVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQGVIHRDI 144 (292)
T ss_pred HHHhC----CCCcHHHHHHhe-ecCCeEEEEEeCCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecCC
Confidence 33332 111112222222 2235679999999999998865322 23333333322 223467899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+|.||++++ ++.++|+|||++..+....... ....+...++++++..-...+...|++++...+.+++.
T Consensus 145 kp~Nill~~--~~~~kL~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~ 213 (292)
T cd06658 145 KSDSILLTS--DGRIKLSDFGFCAQVSKEVPKR------KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID 213 (292)
T ss_pred CHHHEEEcC--CCCEEEccCcchhhcccccccC------ceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHh
Confidence 999999985 7899999999987654432211 01124556777777765566777899999877766543
No 201
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.37 E-value=6.5e-12 Score=129.82 Aligned_cols=185 Identities=15% Similarity=0.096 Sum_probs=119.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|.|++|+||++.. +|+.||+|..+-..... ....+.+|..
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~-----------------------------------~~~~~~~e~~ 50 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSS-----------------------------------AVEDSRKEAV 50 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchH-----------------------------------HHHHHHHHHH
Confidence 5799999999999998 58999999864311000 0012233444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
.+..+ .+..-+.+...+ +..+..+++|||++|+++.+...... ...+...+.... +...+..+|..|++|+|
T Consensus 51 ~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~d 125 (255)
T cd08219 51 LLAKM----KHPNIVAFKESF-EADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRD 125 (255)
T ss_pred HHHhC----CCCCcceEEEEE-EECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence 44433 222223333322 34566799999999999987653221 223333332222 22347889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
++|.||++++ ++.++++|||++..+....... ....++..++++++......++..|++++...+.+++.
T Consensus 126 l~p~nili~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~ 195 (255)
T cd08219 126 IKSKNIFLTQ--NGKVKLGDFGSARLLTSPGAYA------CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCT 195 (255)
T ss_pred CCcceEEECC--CCcEEEcccCcceeeccccccc------ccccCCccccCHHHHccCCcCchhhhhhhchhheehhh
Confidence 9999999985 7899999999998775432211 11234556777777766667778899999877666543
No 202
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.37 E-value=3.3e-12 Score=139.42 Aligned_cols=197 Identities=18% Similarity=0.255 Sum_probs=122.1
Q ss_pred HHHhCCChhhhhcccC-ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCcccc
Q 004334 282 EEELGAPLDDVFERFD-VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKR 358 (760)
Q Consensus 282 e~elG~~~~~iF~~fd-~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~ 358 (760)
++|++..+.++...|. .++||.|.+|.||+|.. +|+.||||+.......
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------------------------- 54 (343)
T cd07880 3 RQEVNKTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQS---------------------------- 54 (343)
T ss_pred hhhhhhhhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccc----------------------------
Confidence 4556656666655564 47899999999999998 6999999986542110
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeec-----cCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHH
Q 004334 359 DWVAIYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWE-----YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLG 433 (760)
Q Consensus 359 ~l~~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e-----~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la 433 (760)
+.....+.+|+..+.++. +..-+.+..++.. .....++||||+ |.++.++.... ..+...+.
T Consensus 55 ------~~~~~~~~~E~~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~ 121 (343)
T cd07880 55 ------ELFAKRAYRELRLLKHMK----HENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKHE--KLSEDRIQ 121 (343)
T ss_pred ------hHHHHHHHHHHHHHHhcC----CCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhcC--CCCHHHHH
Confidence 011122345555555552 2222333333321 123458999999 66887765322 23333222
Q ss_pred HHH--HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-
Q 004334 434 RYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM- 510 (760)
Q Consensus 434 ~~l--v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l- 510 (760)
..+ +...+..+|..|++|+|++|.||+++. ++.++++|||++..+...... ..+...+++++....
T Consensus 122 ~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~---------~~~~~~y~aPE~~~~~ 190 (343)
T cd07880 122 FLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNE--DCELKILDFGLARQTDSEMTG---------YVVTRWYRAPEVILNW 190 (343)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEeecccccccccCccc---------cccCCcccCHHHHhCC
Confidence 221 223468899999999999999999985 789999999999876543211 112334455555443
Q ss_pred CCCCCCCChHHHHHHHHHHH
Q 004334 511 GVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 511 G~~~~~~D~~al~~~~~~~l 530 (760)
...+...|++++...+.+++
T Consensus 191 ~~~~~~~Di~slG~ll~~l~ 210 (343)
T cd07880 191 MHYTQTVDIWSVGCIMAEML 210 (343)
T ss_pred CCCCcHHHHHHHHHHHHHHH
Confidence 23456679999887766554
No 203
>PTZ00284 protein kinase; Provisional
Probab=99.37 E-value=4.5e-12 Score=144.53 Aligned_cols=185 Identities=15% Similarity=0.061 Sum_probs=113.5
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|++ +|+.||||+.+... ... .....|..
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~--~~~-----------------------------------~~~~~e~~ 177 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP--KYT-----------------------------------RDAKIEIQ 177 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecch--hhH-----------------------------------HHHHHHHH
Confidence 5799999999999998 58999999875310 000 01122333
Q ss_pred HHHHHHHh-cCC-CCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh-CCccc
Q 004334 377 NAELFASN-FKD-MDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS-HGFFH 451 (760)
Q Consensus 377 nl~~f~~~-~~~-~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~-~GffH 451 (760)
.+++++.. ..+ ...+.+...+..-....++|||++ |..+.++... ...+....+...+ +-..+..+|. .|++|
T Consensus 178 ~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~-~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiH 255 (467)
T PTZ00284 178 FMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMK-HGPFSHRHLAQIIFQTGVALDYFHTELHLMH 255 (467)
T ss_pred HHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCCeec
Confidence 33333221 111 112333333433344578999988 5566654321 1223333333322 2234788997 59999
Q ss_pred cCCCCCcEEEeccC--------------CCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCC
Q 004334 452 ADPHPGNIAVDDVN--------------GGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTG 517 (760)
Q Consensus 452 aDpHPGNILV~~~~--------------~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~ 517 (760)
+|+||+|||++... .+.++|+|||.+....... ....+...+++++++..+......
T Consensus 256 rDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~---------~~~~gt~~Y~APE~~~~~~~~~~~ 326 (467)
T PTZ00284 256 TDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSR---------TAIVSTRHYRSPEVVLGLGWMYST 326 (467)
T ss_pred CCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcccc---------ccccCCccccCcHHhhcCCCCcHH
Confidence 99999999997511 1259999999875433221 112456778888888766667778
Q ss_pred ChHHHHHHHHHHHH
Q 004334 518 DTTAVRRTAQFFLN 531 (760)
Q Consensus 518 D~~al~~~~~~~l~ 531 (760)
|+++++-.+.+++.
T Consensus 327 DiwSlGvil~ellt 340 (467)
T PTZ00284 327 DMWSMGCIIYELYT 340 (467)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999988777654
No 204
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.37 E-value=2.4e-12 Score=145.15 Aligned_cols=134 Identities=19% Similarity=0.341 Sum_probs=95.6
Q ss_pred eceeeeccC--CCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH---HHHHHHHHHhCCccccCCCCCcEEEeccCCC
Q 004334 393 VPTIFWEYT--TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA---VESYLEQILSHGFFHADPHPGNIAVDDVNGG 467 (760)
Q Consensus 393 VP~vy~e~s--t~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l---v~~~L~qI~~~GffHaDpHPGNILV~~~~~g 467 (760)
|-+.|..+- ...|.|||||+|+.+..++ -+.|+=.+.+|+.- +.+.++.+|..||+|+|+||.||||+. +|
T Consensus 691 VVrLyySFQDkdnLYFVMdYIPGGDmMSLL--IrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDr--dG 766 (1034)
T KOG0608|consen 691 VVRLYYSFQDKDNLYFVMDYIPGGDMMSLL--IRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR--DG 766 (1034)
T ss_pred eEEEEEEeccCCceEEEEeccCCccHHHHH--HHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEcc--CC
Confidence 445565543 4579999999999988763 34555556666543 334578899999999999999999996 99
Q ss_pred cEEEEeecceeccC----------------------hh-----------hH---HHHHHHHHHHhhcCHHHHHHHHHHcC
Q 004334 468 RLIFYDFGMMGSIS----------------------PN-----------IR---EGLLEAFYGIYEKDADKVLQAMVQMG 511 (760)
Q Consensus 468 ~l~LiDFG~v~~l~----------------------~~-----------~r---~~l~~l~~al~~~D~~~v~~~l~~lG 511 (760)
.|+|.|||++.-+. ++ .+ +.-..++...+.+++.+++++++.-.
T Consensus 767 HIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~ 846 (1034)
T KOG0608|consen 767 HIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLART 846 (1034)
T ss_pred ceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhccc
Confidence 99999999985320 00 11 22233444555688889998877665
Q ss_pred CCCCCCChHHHHHHHHHHH
Q 004334 512 VLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 512 ~~~~~~D~~al~~~~~~~l 530 (760)
-.+...|-+.+..++.+++
T Consensus 847 g~~q~cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 847 GYTQLCDWWSVGVILYEML 865 (1034)
T ss_pred CccccchhhHhhHHHHHHh
Confidence 4567789999988877665
No 205
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.37 E-value=7.3e-12 Score=133.74 Aligned_cols=190 Identities=17% Similarity=0.214 Sum_probs=119.0
Q ss_pred ChhhhhcccCccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHH
Q 004334 288 PLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYD 365 (760)
Q Consensus 288 ~~~~iF~~fd~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~ 365 (760)
++...|..+ ..||.|++|+||+|+. +|+.||||+........
T Consensus 18 ~~~~~~~~~--~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~---------------------------------- 61 (297)
T cd06659 18 DPRSLLENY--IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQR---------------------------------- 61 (297)
T ss_pred cchhhHHhh--hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccch----------------------------------
Confidence 333444433 3699999999999998 58999999864421110
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHH---HHHHHHHHH
Q 004334 366 ECASVLYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLG---RYAVESYLE 442 (760)
Q Consensus 366 E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la---~~lv~~~L~ 442 (760)
...+.+|...+..+ .+...+.+...+ ......+++|||++|.+|.++... ...+...+. ..++ ..+.
T Consensus 62 --~~~~~~e~~~l~~l----~hp~i~~~~~~~-~~~~~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~-~~L~ 131 (297)
T cd06659 62 --RELLFNEVVIMRDY----QHQNVVEMYKSY-LVGEELWVLMEFLQGGALTDIVSQ--TRLNEEQIATVCESVL-QALC 131 (297)
T ss_pred --HHHHHHHHHHHHhC----CCCchhhhhhhe-eeCCeEEEEEecCCCCCHHHHHhh--cCCCHHHHHHHHHHHH-HHHH
Confidence 01122333333322 111111111111 223567999999999999886532 223333332 2233 3367
Q ss_pred HHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHH
Q 004334 443 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAV 522 (760)
Q Consensus 443 qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al 522 (760)
.+|..|++|+|++|+||+++. ++.++|+|||++..+....... ....+...+++++...-+..+...|++++
T Consensus 132 ~LH~~~ivH~dl~p~Nill~~--~~~~kL~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl 203 (297)
T cd06659 132 YLHSQGVIHRDIKSDSILLTL--DGRVKLSDFGFCAQISKDVPKR------KSLVGTPYWMAPEVISRTPYGTEVDIWSL 203 (297)
T ss_pred HHHhCCeecCCCCHHHeEEcc--CCcEEEeechhHhhcccccccc------cceecCccccCHHHHccCCCCchhhHHHH
Confidence 889999999999999999985 8899999999987665432211 01224456677777766666777899999
Q ss_pred HHHHHHHHH
Q 004334 523 RRTAQFFLN 531 (760)
Q Consensus 523 ~~~~~~~l~ 531 (760)
.-.+.+++.
T Consensus 204 G~il~el~~ 212 (297)
T cd06659 204 GIMVIEMVD 212 (297)
T ss_pred HHHHHHHHh
Confidence 877766543
No 206
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.37 E-value=9.8e-12 Score=128.36 Aligned_cols=184 Identities=16% Similarity=0.144 Sum_probs=123.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.|+||+.++.... .....+..|..
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-----------------------------------~~~~~~~~e~~ 51 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-----------------------------------EFRKQLLRELK 51 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-----------------------------------HHHHHHHHHHH
Confidence 6899999999999999 4999999987663221 01122344555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh-CCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS-HGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~-~GffHaD 453 (760)
.+.++. +..-+.+...+ ......+++|||++|.+|.++.... ..++.......+ +-..+..+|. .|++|+|
T Consensus 52 ~l~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~ 125 (264)
T cd06623 52 TLRSCE----SPYVVKCYGAF-YKEGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHIIHRD 125 (264)
T ss_pred HHHhcC----CCCeeeEEEEE-ccCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCCccCC
Confidence 555442 22222222222 3346679999999999999876432 223433333322 2233678999 9999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
++|+||++++ ++.++|+|||+...+....... ....+...+++++....+..+...|++++...+.+++.
T Consensus 126 l~~~ni~~~~--~~~~~l~df~~~~~~~~~~~~~------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~t 195 (264)
T cd06623 126 IKPSNLLINS--KGEVKIADFGISKVLENTLDQC------NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECAL 195 (264)
T ss_pred CCHHHEEECC--CCCEEEccCccceecccCCCcc------cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHh
Confidence 9999999986 8899999999998775543221 01123455667777777767778899999987776653
No 207
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.36 E-value=6.8e-12 Score=131.52 Aligned_cols=185 Identities=18% Similarity=0.199 Sum_probs=115.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..+|+|++|+||+|++ +|+.||+|+........ .....+.+|+.
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----------------------------------~~~~~~~~e~~ 52 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDP----------------------------------VIKKIALREIR 52 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCc----------------------------------cccHHHHHHHH
Confidence 5689999999999999 58999999865421000 00111234444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI~~~GffHaDp 454 (760)
.+.++ .+..-+.+...+ ......+++|||++|..+..+... ...++...+...+.+ ..+..+|..|++|+|+
T Consensus 53 ~l~~~----~h~~i~~~~~~~-~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl 126 (286)
T cd07847 53 MLKQL----KHPNLVNLIEVF-RRKRKLHLVFEYCDHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDV 126 (286)
T ss_pred HHHhC----CCCCEeeeeeEE-eeCCEEEEEEeccCccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceecCC
Confidence 44443 222223333333 334567999999999888776432 122344333333222 3477889999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~l~ 531 (760)
+|.||+++. ++.++|+|||++..++...... ....+...+++++.... ...+...|++++...+.+++.
T Consensus 127 ~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~ 196 (286)
T cd07847 127 KPENILITK--QGQIKLCDFGFARILTGPGDDY------TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLT 196 (286)
T ss_pred ChhhEEEcC--CCcEEECccccceecCCCcccc------cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHh
Confidence 999999985 7899999999998876543210 00112233445555433 234567899999877766543
No 208
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.36 E-value=6.4e-12 Score=133.05 Aligned_cols=183 Identities=15% Similarity=0.156 Sum_probs=114.0
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.|++|+......+ ....+.+|..
T Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~------------------------------------~~~~~~~e~~ 61 (292)
T cd06644 18 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEE------------------------------------ELEDYMVEIE 61 (292)
T ss_pred heecCCCCeEEEEEEECCCCceEEEEEeccCCHH------------------------------------HHHHHHHHHH
Confidence 4699999999999998 5899999987553111 0112234444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+..+ .+..-+.+...+ ......++||||++|..+..+.......++...+...+ +-..+..+|..|++|+|+
T Consensus 62 ~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dl 136 (292)
T cd06644 62 ILATC----NHPYIVKLLGAF-YWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDL 136 (292)
T ss_pred HHHhC----CCCcEeeeEEEE-EeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCC
Confidence 44443 222222222222 33567899999999999987643222334444333322 223467889999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCCCCCChHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-----G~~~~~~D~~al~~~~~~~ 529 (760)
||.||+++. ++.++|+|||++.......... ....++..+++++++.. ...+...|+++++..+.++
T Consensus 137 kp~Nili~~--~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el 208 (292)
T cd06644 137 KAGNVLLTL--DGDIKLADFGVSAKNVKTLQRR------DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 208 (292)
T ss_pred CcceEEEcC--CCCEEEccCccceecccccccc------ceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHH
Confidence 999999975 7899999999876543321110 01123445566665432 2234467999998777665
Q ss_pred H
Q 004334 530 L 530 (760)
Q Consensus 530 l 530 (760)
+
T Consensus 209 ~ 209 (292)
T cd06644 209 A 209 (292)
T ss_pred h
Confidence 4
No 209
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.36 E-value=1.3e-11 Score=126.07 Aligned_cols=188 Identities=18% Similarity=0.116 Sum_probs=124.3
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.++|+.|++|.||+|.. +|+.|++|+.+..... ......+.+|.
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------------------------~~~~~~~~~e~ 50 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS----------------------------------EEELEALEREI 50 (260)
T ss_pred eeEeeecCceEEEEEEECCCCcEEEEEEeeccccc----------------------------------hHHHHHHHHHH
Confidence 36899999999999999 4999999987653211 01112234455
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccC--CCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCccc
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYT--TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGFFH 451 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~s--t~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~~GffH 451 (760)
..+.++. +..-+.+.... ... ...+++|||++|.+|.++..... .++...+...+. -..+..+|..|++|
T Consensus 51 ~~l~~l~----~~~i~~~~~~~-~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~h 124 (260)
T cd06606 51 RILSSLQ----HPNIVRYYGSE-RDEEKNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGIVH 124 (260)
T ss_pred HHHHHcC----CCCEeeEEEEE-ecCCCCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5555542 22222222222 223 56799999999999998754322 334333333222 23367889999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+|++|.||++++ ++.++|+|||............ ......++..++.++....+......|++++...+.+++.
T Consensus 125 ~dl~p~ni~i~~--~~~~~l~d~~~~~~~~~~~~~~----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~ 198 (260)
T cd06606 125 RDIKGANILVDS--DGVVKLADFGCAKRLGDIETGE----GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMAT 198 (260)
T ss_pred cCCCHHHEEEcC--CCCEEEcccccEEecccccccc----cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHh
Confidence 999999999986 7899999999998887654210 0111235566777777766667778899999887766654
No 210
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.36 E-value=6.8e-12 Score=122.17 Aligned_cols=131 Identities=22% Similarity=0.300 Sum_probs=95.1
Q ss_pred ccccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.+|++.|..++||+++..|+.|++|+..++.... .....|+..
T Consensus 3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~~~-------------------------------------~~~~~E~~~ 45 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTELL-------------------------------------INRENEAEN 45 (170)
T ss_pred eeecCCcccCceEEEEECCeEEEEEeCCCCcccc-------------------------------------cCHHHHHHH
Confidence 3689999999999999999999999876642100 012456777
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCC-----cccc
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHG-----FFHA 452 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~G-----ffHa 452 (760)
++.+.+. ..+|+++....+..+++|||++|.++.+.. ..+ ...... +...+..+|..+ ++|+
T Consensus 46 l~~l~~~------~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~-----~~~-~~~~~~-l~~~l~~LH~~~~~~~~~~Hg 112 (170)
T cd05151 46 SKLAAEA------GIGPKLYYFDPETGVLITEFIEGSELLTED-----FSD-PENLEK-IAKLLKKLHSSPLPDLVPCHN 112 (170)
T ss_pred HHHHHHh------CCCCceEEEeCCCCeEEEEecCCCcccccc-----ccC-HHHHHH-HHHHHHHHhCCCCCCceeecC
Confidence 7776542 236888877776789999999999887531 011 222233 334567788877 5999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccC
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSIS 481 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~ 481 (760)
|+||+||+++ +++++++|||.++.-+
T Consensus 113 D~~~~Nil~~---~~~~~liDf~~a~~~~ 138 (170)
T cd05151 113 DLLPGNFLLD---DGRLWLIDWEYAGMND 138 (170)
T ss_pred CCCcCcEEEE---CCeEEEEecccccCCC
Confidence 9999999997 5689999999988654
No 211
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.36 E-value=1.2e-11 Score=126.62 Aligned_cols=185 Identities=17% Similarity=0.157 Sum_probs=120.0
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.++.|++|.||+|.. +|+.|++|+....... .+....+.+|.+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------------------------~~~~~~~~~e~~ 51 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS----------------------------------EKEREDALNEVK 51 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC----------------------------------hHHHHHHHHHHH
Confidence 5799999999999999 4899999986542111 011122334554
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh---cCCCHHHHHHHHHH--HHHHHHHhCCccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---LGVDRKRLGRYAVE--SYLEQILSHGFFH 451 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~---~g~d~~~la~~lv~--~~L~qI~~~GffH 451 (760)
.+..+. +..-+.+...+ ......+++|||++|.+|.+...... ..++...+...+.. ..+..+|..|++|
T Consensus 52 ~l~~l~----~~~~~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H 126 (258)
T cd08215 52 ILKKLN----HPNIIKYYESF-EEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILH 126 (258)
T ss_pred HHHhcC----CCChhheEEEE-ecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 444442 21112222222 23367799999999999988654321 33444444433322 3367899999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|++|.||++++ ++.++|+|||++........ .. ....++..+++++.......+...|++++...+.+++
T Consensus 127 ~dl~~~nil~~~--~~~~~l~d~~~~~~~~~~~~--~~----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~ 197 (258)
T cd08215 127 RDIKPQNIFLTS--NGLVKLGDFGISKVLSSTVD--LA----KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELC 197 (258)
T ss_pred ccCChHHeEEcC--CCcEEECCccceeecccCcc--ee----cceeeeecccChhHhccCCCCccccHHHHHHHHHHHH
Confidence 999999999985 78999999999987765431 11 1112444566666665555667789999887665544
No 212
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.36 E-value=7.9e-12 Score=131.57 Aligned_cols=187 Identities=17% Similarity=0.085 Sum_probs=118.6
Q ss_pred cccccccccEEEEEEE------CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l------~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~ 372 (760)
+.||.|++|+||.+.. +|+.||+|+.+...... ....+.
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~ 54 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQ-----------------------------------NTSGWK 54 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChH-----------------------------------HHHHHH
Confidence 5799999999988753 47899999876532111 111234
Q ss_pred HHHHHHHHHHHhcCCCCceeeceeeecc-CCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCc
Q 004334 373 QEAANAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGF 449 (760)
Q Consensus 373 ~EA~nl~~f~~~~~~~~~V~VP~vy~e~-st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~~Gf 449 (760)
+|+..+.++ .+..-+.+...+... ....+++|||++|++|.++... ..++...+...+. -..+..+|..|+
T Consensus 55 ~E~~~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~l~~~~~~~i~~~l~~~l~~lH~~~i 128 (283)
T cd05080 55 KEINILKTL----YHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK--HKLNLAQLLLFAQQICEGMAYLHSQHY 128 (283)
T ss_pred HHHHHHHhC----CCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 455555544 222222222222222 2246899999999999887543 2344444433332 234788999999
Q ss_pred cccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004334 450 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 450 fHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~ 529 (760)
+|+|++|.||++++ ++.++|.|||++..+.......- + .........+++++....+..++..|++++...+.++
T Consensus 129 ~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~--~-~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el 203 (283)
T cd05080 129 IHRDLAARNVLLDN--DRLVKIGDFGLAKAVPEGHEYYR--V-REDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYEL 203 (283)
T ss_pred eccccChheEEEcC--CCcEEEeecccccccCCcchhhc--c-CCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHH
Confidence 99999999999985 78999999999887754322100 0 0000122235566666666777889999999887776
Q ss_pred HH
Q 004334 530 LN 531 (760)
Q Consensus 530 l~ 531 (760)
+.
T Consensus 204 ~t 205 (283)
T cd05080 204 LT 205 (283)
T ss_pred Hh
Confidence 64
No 213
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.36 E-value=6.1e-12 Score=134.30 Aligned_cols=182 Identities=18% Similarity=0.219 Sum_probs=119.0
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|.|++|.||+|+. +|+.|+||...-.-.. . ...+.+|..
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~----------------------------~--------~~~~~~e~~ 68 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP----------------------------K--------KELIINEIL 68 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc----------------------------h--------HHHHHHHHH
Confidence 5799999999999997 6999999975321000 0 011234444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+..+ .+...+.+...+ ......+++|||++|.+|.++.... ..+...+.... +-..+..+|..|++|+|+
T Consensus 69 ~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL 141 (296)
T cd06655 69 VMKEL----KNPNIVNFLDSF-LVGDELFVVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQVIHRDI 141 (296)
T ss_pred HHHhc----CCCceeeeeeeE-ecCceEEEEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 44443 222222222222 2345679999999999998865422 23444433332 223467889999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+|.||+++. ++.++++|||++..+.+..... ....+...+++++...-+..+...|++++...+.+++.
T Consensus 142 ~p~Nili~~--~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~llt 210 (296)
T cd06655 142 KSDNVLLGM--DGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVE 210 (296)
T ss_pred CHHHEEECC--CCCEEEccCccchhcccccccC------CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHh
Confidence 999999985 8899999999988776543211 11124456677777666666778899999877766553
No 214
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.36 E-value=1.2e-11 Score=129.76 Aligned_cols=186 Identities=16% Similarity=0.084 Sum_probs=116.1
Q ss_pred cccccccccEEEEEEEC-------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~-------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
..||.|++|+||+|.+. ++.||||+.+...... ....+
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~-----------------------------------~~~~~ 56 (277)
T cd05062 12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMR-----------------------------------ERIEF 56 (277)
T ss_pred eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHH-----------------------------------HHHHH
Confidence 57999999999999863 4679999765421100 00112
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhc---------CCCHHHHHHHH--HHHH
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL---------GVDRKRLGRYA--VESY 440 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~---------g~d~~~la~~l--v~~~ 440 (760)
.+|+..+..+ .+..-+.+... ....+..++||||++|++|.++...... ..+...+...+ +...
T Consensus 57 ~~e~~~l~~l----~~~~iv~~~~~-~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 131 (277)
T cd05062 57 LNEASVMKEF----NCHHVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADG 131 (277)
T ss_pred HHHHHHHHhC----CCCCeeeEEEE-EcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHH
Confidence 3444444333 22222222222 2334568999999999999987532111 11223332222 2234
Q ss_pred HHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChH
Q 004334 441 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 520 (760)
Q Consensus 441 L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~ 520 (760)
+..+|..|++|+|+||.||++++ ++.++++|||++..+........ .........+++++...-+..++..|++
T Consensus 132 l~~lH~~~~vH~dlkp~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 205 (277)
T cd05062 132 MAYLNANKFVHRDLAARNCMVAE--DFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVW 205 (277)
T ss_pred HHHHHHCCcccCCcchheEEEcC--CCCEEECCCCCccccCCcceeec----CCCCccCHhhcChhHhhcCCcCchhHHH
Confidence 68899999999999999999986 88999999999876543211000 0001123567788877777778888999
Q ss_pred HHHHHHHHHH
Q 004334 521 AVRRTAQFFL 530 (760)
Q Consensus 521 al~~~~~~~l 530 (760)
++.-.+.+++
T Consensus 206 slG~~l~el~ 215 (277)
T cd05062 206 SFGVVLWEIA 215 (277)
T ss_pred HHHHHHHHHH
Confidence 9987766554
No 215
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.36 E-value=8.9e-12 Score=128.71 Aligned_cols=184 Identities=18% Similarity=0.178 Sum_probs=119.4
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+++|.|++|.||+|.. +++.+++|+......+. ...+.+|..
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~------------------------------------~~~~~~e~~ 52 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDD------------------------------------FEIIQQEIS 52 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhh------------------------------------HHHHHHHHH
Confidence 6899999999999998 58899999876421110 112334444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~~GffHaDp 454 (760)
.+.++ .+..-+.+...+ ......+++|||++|..|.++.......++...+...+. -..+..+|..|++|+|+
T Consensus 53 ~l~~~----~h~~i~~~~~~~-~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl 127 (262)
T cd06613 53 MLKEC----RHPNIVAYFGSY-LRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDI 127 (262)
T ss_pred HHHhC----CCCChhceEEEE-EeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Confidence 44444 222222222222 334567999999999999987654333445444333322 22367789999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC---CCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG---VLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG---~~~~~~D~~al~~~~~~~l~ 531 (760)
+|.||+++. ++.++|+|||++..+....... ....++..++++++.... ..+...|++++...+.+++.
T Consensus 128 ~p~ni~i~~--~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~t 199 (262)
T cd06613 128 KGANILLTE--DGDVKLADFGVSAQLTATIAKR------KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAE 199 (262)
T ss_pred ChhhEEECC--CCCEEECccccchhhhhhhhcc------ccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHh
Confidence 999999986 7899999999988765432110 011234456667766544 55667899998877666543
No 216
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.36 E-value=1.4e-11 Score=129.27 Aligned_cols=183 Identities=16% Similarity=0.154 Sum_probs=116.5
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..||.|++|+||+|.. +|+.||+|+.+...... ...+..|+.
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~------------------------------------~~~~~~e~~ 54 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEE------------------------------------LEDFMVEID 54 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHH------------------------------------HHHHHHHHH
Confidence 4699999999999998 58999999876531111 012234444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~~GffHaDp 454 (760)
.+.++ .+..-+.+...+ ......++||||++|+.|.++.......++...+...+. -..+..+|..|++|+|+
T Consensus 55 ~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl 129 (280)
T cd06611 55 ILSEC----KHPNIVGLYEAY-FYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDL 129 (280)
T ss_pred HHHhC----CCCceeEEEEEE-ecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 44444 222223333322 234567999999999999887543322344433333222 23367889999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-----CCCCCCChHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-----VLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-----~~~~~~D~~al~~~~~~~ 529 (760)
+|.||+++. ++.++++|||............ ....+...++.+++...+ ..+...|++++.-.+.++
T Consensus 130 ~p~nili~~--~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l 201 (280)
T cd06611 130 KAGNILLTL--DGDVKLADFGVSAKNKSTLQKR------DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIEL 201 (280)
T ss_pred ChhhEEECC--CCCEEEccCccchhhccccccc------ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHH
Confidence 999999985 8899999999887654332111 011245556677765422 234568999998766655
Q ss_pred H
Q 004334 530 L 530 (760)
Q Consensus 530 l 530 (760)
+
T Consensus 202 ~ 202 (280)
T cd06611 202 A 202 (280)
T ss_pred H
Confidence 4
No 217
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.36 E-value=2.6e-12 Score=141.25 Aligned_cols=176 Identities=11% Similarity=0.050 Sum_probs=113.1
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|+. +++.||+|+...+.. ..|+.
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~------------------------------------------~~E~~ 109 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTT------------------------------------------LIEAM 109 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCcccc------------------------------------------HHHHH
Confidence 6899999999999999 478999997543210 11333
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+.++ .+..-+.+...+ ......++||||+.| .+.++.......+....+...+ +-..+..+|..|++|+|+
T Consensus 110 ~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDl 183 (357)
T PHA03209 110 LLQNV----NHPSVIRMKDTL-VSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDV 183 (357)
T ss_pred HHHhC----CCCCCcChhheE-EeCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 33322 222222222222 223457899999976 4555433222233433333222 233478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
||.||+++. ++.++|+|||++......... .-..++..++++++..-+......|++++.-.+.+++.
T Consensus 184 kp~Nill~~--~~~~kl~DfG~a~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~ 251 (357)
T PHA03209 184 KTENIFIND--VDQVCIGDLGAAQFPVVAPAF-------LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLA 251 (357)
T ss_pred CHHHEEECC--CCCEEEecCccccccccCccc-------ccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHH
Confidence 999999985 789999999998753322110 01235666777877766666778899999988777653
No 218
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.36 E-value=6.2e-12 Score=132.28 Aligned_cols=188 Identities=18% Similarity=0.162 Sum_probs=117.2
Q ss_pred cccccccccEEEEEEE------CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l------~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~ 372 (760)
+.||+|++|.||+|.. +|+.||||..+...... ...+.
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~------------------------------------~~~~~ 53 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEH------------------------------------LRDFE 53 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHH------------------------------------HHHHH
Confidence 5799999999999984 37899999865532110 11233
Q ss_pred HHHHHHHHHHHhcCCCCceeeceeeeccC-CCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCc
Q 004334 373 QEAANAELFASNFKDMDYVKVPTIFWEYT-TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 449 (760)
Q Consensus 373 ~EA~nl~~f~~~~~~~~~V~VP~vy~e~s-t~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~Gf 449 (760)
+|.+.+.++ .+..-+.+..+..... ...+++|||++|++|.++........+........ +-..+..+|..|+
T Consensus 54 ~e~~~l~~l----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i 129 (284)
T cd05081 54 REIEILKSL----QHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRY 129 (284)
T ss_pred HHHHHHHhC----CCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 455544444 2222222222221122 34689999999999998764322223433332222 2234788999999
Q ss_pred cccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004334 450 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 450 fHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~ 529 (760)
+|+|++|.||++++ +++++|+|||++..+......... .........+++++....+..+...|++++...+.++
T Consensus 130 ~H~dlkp~nili~~--~~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 204 (284)
T cd05081 130 VHRDLATRNILVES--ENRVKIGDFGLTKVLPQDKEYYKV---REPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 204 (284)
T ss_pred eeccCCHhhEEECC--CCeEEECCCcccccccCCCcceee---cCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHH
Confidence 99999999999985 789999999999877543211000 0000111224566666556666778999998877766
Q ss_pred HH
Q 004334 530 LN 531 (760)
Q Consensus 530 l~ 531 (760)
+.
T Consensus 205 ~~ 206 (284)
T cd05081 205 FT 206 (284)
T ss_pred hh
Confidence 54
No 219
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.36 E-value=8.1e-12 Score=138.53 Aligned_cols=86 Identities=15% Similarity=0.096 Sum_probs=63.4
Q ss_pred HHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004334 439 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 518 (760)
Q Consensus 439 ~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D 518 (760)
..+..+|..|++|+|++|.||++++ ++.++|+|||++..+........ .+.......+++++....+..++..|
T Consensus 223 ~aL~yLH~~giiHrDLkp~Nil~~~--~~~~kL~DfGla~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~D 296 (374)
T cd05106 223 QGMDFLASKNCIHRDVAARNVLLTD--GRVAKICDFGLARDIMNDSNYVV----KGNARLPVKWMAPESIFDCVYTVQSD 296 (374)
T ss_pred HHHHHHHHCCEEeccCchheEEEeC--CCeEEEeeceeeeeccCCcceee----ccCCCCccceeCHHHhcCCCCCcccc
Confidence 3478899999999999999999985 78999999999987654321110 11111234577788777777788899
Q ss_pred hHHHHHHHHHHH
Q 004334 519 TTAVRRTAQFFL 530 (760)
Q Consensus 519 ~~al~~~~~~~l 530 (760)
++++.-.+.+++
T Consensus 297 vwSlGvil~ell 308 (374)
T cd05106 297 VWSYGILLWEIF 308 (374)
T ss_pred HHHHHHHHHHHH
Confidence 999988776654
No 220
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.36 E-value=7.8e-12 Score=129.93 Aligned_cols=186 Identities=16% Similarity=0.104 Sum_probs=116.7
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCC-chhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPG-LKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPg-i~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
+.||.|++|+||+|+. +|+.|+||..... ..+ ......+.+|.
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~----------------------------------~~~~~~~~~e~ 53 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMD----------------------------------AKARADCIKEI 53 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhhh----------------------------------HHHHHHHHHHH
Confidence 6799999999999997 6999999965431 000 00111233454
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh---hcCCCHHHHHHHH--HHHHHHHHHhCCcc
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD---ELGVDRKRLGRYA--VESYLEQILSHGFF 450 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~---~~g~d~~~la~~l--v~~~L~qI~~~Gff 450 (760)
+.+..+ .+..-+.+...+ ......+++|||++|.+|.++.... ....+...+...+ +-..+..+|..|++
T Consensus 54 ~~l~~~----~h~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~ 128 (267)
T cd08229 54 DLLKQL----NHPNVIKYYASF-IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVM 128 (267)
T ss_pred HHHHHc----cCCchhhhhhee-EeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 444443 121112222222 1234578999999999999865421 1123333332222 22336789999999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|+|++|.||+++. ++.++++|||++..+...... .....++..+++++.......+...|++++.-.+.+++
T Consensus 129 H~dl~p~nili~~--~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~ 200 (267)
T cd08229 129 HRDIKPANVFITA--TGVVKLGDLGLGRFFSSKTTA------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA 200 (267)
T ss_pred cCCCCHHHEEEcC--CCCEEECcchhhhccccCCcc------cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHH
Confidence 9999999999985 789999999998776543211 01122445566677665555667789999988776655
Q ss_pred H
Q 004334 531 N 531 (760)
Q Consensus 531 ~ 531 (760)
.
T Consensus 201 ~ 201 (267)
T cd08229 201 A 201 (267)
T ss_pred h
Confidence 3
No 221
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.36 E-value=1.1e-11 Score=129.19 Aligned_cols=183 Identities=14% Similarity=0.094 Sum_probs=117.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..||.|++|.||+|++ +++.|++|......... ...+.+|+.
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~------------------------------------~~~~~~e~~ 57 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRY------------------------------------VQPLHEEIA 57 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHH------------------------------------HHHHHHHHH
Confidence 5899999999999998 57899999765532111 112345555
Q ss_pred HHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCC--CHHHHHHH--HHHHHHHHHHhCCcc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGV--DRKRLGRY--AVESYLEQILSHGFF 450 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~--d~~~la~~--lv~~~L~qI~~~Gff 450 (760)
.+.+++ ++++ .+++. ......+++|||++|.+|.++........ +...+... .+...+..+|..|++
T Consensus 58 ~l~~l~-----h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~ 130 (268)
T cd06624 58 LHSYLK-----HRNI--VQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIV 130 (268)
T ss_pred HHHhcC-----CCCe--eeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 555542 2222 22222 23356799999999999998764322222 33333222 233447788999999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC--CCCCCChHHHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV--LVPTGDTTAVRRTAQF 528 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~--~~~~~D~~al~~~~~~ 528 (760)
|+|++|.||+++. .++.++|+|||++..+....... ....++..+++++....+. .....|++++...+.+
T Consensus 131 h~dl~p~nil~~~-~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~ 203 (268)
T cd06624 131 HRDIKGDNVLVNT-YSGVVKISDFGTSKRLAGINPCT------ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVE 203 (268)
T ss_pred ecCCCHHHEEEcC-CCCeEEEecchhheecccCCCcc------ccCCCCccccChhhhccccccCCchhhhHHHHHHHHH
Confidence 9999999999974 35789999999987764322100 0113455566777664433 4567899999877766
Q ss_pred HHH
Q 004334 529 FLN 531 (760)
Q Consensus 529 ~l~ 531 (760)
++.
T Consensus 204 l~~ 206 (268)
T cd06624 204 MAT 206 (268)
T ss_pred HHh
Confidence 543
No 222
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.36 E-value=1.2e-11 Score=132.52 Aligned_cols=182 Identities=16% Similarity=0.178 Sum_probs=119.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|.. +|..||+|..+..... +....+.+|++
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~-----------------------------------~~~~~~~~E~~ 51 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKP-----------------------------------AIRNQIIRELK 51 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCH-----------------------------------HHHHHHHHHHH
Confidence 5799999999999998 5899999986653221 11122345555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh-CCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS-HGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~-~GffHaD 453 (760)
.+.++ .+..-+.+...+. .....+++|||++|++|.++.... ..++...+.... +-..+..+|. +|++|+|
T Consensus 52 ~l~~l----~h~~iv~~~~~~~-~~~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~d 125 (308)
T cd06615 52 VLHEC----NSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHKIMHRD 125 (308)
T ss_pred HHHhC----CCCCCCeEEEEEe-eCCEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECC
Confidence 55554 2222233333332 345679999999999999876432 122322221211 2233677886 6999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
++|.||++++ ++.++++|||++..+....... ..+...+++++.......+...|++++...+.+++.
T Consensus 126 l~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~--------~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~ 193 (308)
T cd06615 126 VKPSNILVNS--RGEIKLCDFGVSGQLIDSMANS--------FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAI 193 (308)
T ss_pred CChHHEEEec--CCcEEEccCCCccccccccccc--------CCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHh
Confidence 9999999985 7899999999987764432111 123455667777665666778899999887766653
No 223
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.36 E-value=7.6e-13 Score=142.28 Aligned_cols=180 Identities=22% Similarity=0.211 Sum_probs=107.8
Q ss_pred CccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH
Q 004334 297 DVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (760)
Q Consensus 297 d~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E 374 (760)
+.+-+|+||||.||+|.+ ++++||||-..|+-+-. .. |
T Consensus 28 ~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-nr---------------------------------------E 67 (364)
T KOG0658|consen 28 AVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-NR---------------------------------------E 67 (364)
T ss_pred eeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-cH---------------------------------------H
Confidence 346899999999999999 58999999766642211 11 2
Q ss_pred HHHHHHHHHhcCCCCc-eeeceeeeccCCC----eEEEEeecCCCchhhhhhhh---hcC---CCHHHHHHHHHHHHHHH
Q 004334 375 AANAELFASNFKDMDY-VKVPTIFWEYTTP----QILTMEYVPGIKINRIQSLD---ELG---VDRKRLGRYAVESYLEQ 443 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~-V~VP~vy~e~st~----~vLVME~ieG~~L~d~~~l~---~~g---~d~~~la~~lv~~~L~q 443 (760)
...|.+ . ++++ |..-..|...++. .-|||||++- +|.+....- ... ++-+.....+.+ .+..
T Consensus 68 l~im~~----l-~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfr-gl~y 140 (364)
T KOG0658|consen 68 LQIMRK----L-DHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFR-GLAY 140 (364)
T ss_pred HHHHHh----c-CCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHH-HHHH
Confidence 222221 1 3333 3333333222222 2589999963 555543310 111 122333333333 3778
Q ss_pred HHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHH
Q 004334 444 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 523 (760)
Q Consensus 444 I~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~ 523 (760)
+|.+|+.|||+||.||||++ ..|.++|+|||.++.+.+..... ..+. .-+....+.+...--.+...|+|+.+
T Consensus 141 Lh~~~IcHRDIKPqNlLvD~-~tg~LKicDFGSAK~L~~~epni--SYic----SRyYRaPELifga~~Yt~~IDiWSaG 213 (364)
T KOG0658|consen 141 LHSHGICHRDIKPQNLLVDP-DTGVLKICDFGSAKVLVKGEPNI--SYIC----SRYYRAPELIFGATEYTTSIDIWSAG 213 (364)
T ss_pred HHhcCcccCCCChheEEEcC-CCCeEEeccCCcceeeccCCCce--eEEE----eccccCHHHHcCccccCceeEEhhhh
Confidence 89999999999999999996 57999999999999998765531 1111 11222233333333445667888777
Q ss_pred HHHHHHH
Q 004334 524 RTAQFFL 530 (760)
Q Consensus 524 ~~~~~~l 530 (760)
=.+.+++
T Consensus 214 CV~aELl 220 (364)
T KOG0658|consen 214 CVMAELL 220 (364)
T ss_pred HHHHHHh
Confidence 6655554
No 224
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.36 E-value=1.1e-11 Score=128.65 Aligned_cols=182 Identities=15% Similarity=0.151 Sum_probs=119.5
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
+.||+|++|.||+|.. +|+.||||..+.+.... ..+.+|...
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~-------------------------------------~~~~~E~~~ 54 (260)
T cd05067 12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSP-------------------------------------EAFLAEANL 54 (260)
T ss_pred eeeccCccceEEeeecCCCceEEEEEecCCCCcH-------------------------------------HHHHHHHHH
Confidence 5799999999999998 68999999876532110 112344444
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~-~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
+.++ .+..-+.+..++ .....+++|||++|++|.++.... ....+.......+ +-..++.+|..|++|+|+
T Consensus 55 l~~l----~h~~i~~~~~~~--~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl 128 (260)
T cd05067 55 MKQL----QHPRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDL 128 (260)
T ss_pred HHhc----CCcCeeeEEEEE--ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccc
Confidence 4444 222223333332 234579999999999998865322 1223433333322 223478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|.||++++ ++.+.++|||.+..+........ ........+++++....+..++..|++++...+.+++
T Consensus 129 ~p~ni~i~~--~~~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~ 197 (260)
T cd05067 129 RAANILVSE--TLCCKIADFGLARLIEDNEYTAR-----EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 197 (260)
T ss_pred cHHhEEEcC--CCCEEEccCcceeecCCCCcccc-----cCCcccccccCHHHhccCCcCcccchHHHHHHHHHHH
Confidence 999999986 78999999999988763221100 0112234566777777777778899999987776654
No 225
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.36 E-value=3e-12 Score=143.17 Aligned_cols=183 Identities=16% Similarity=0.181 Sum_probs=132.5
Q ss_pred ccccccccEEEEEEECCe-eEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARLKGE-EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 300 PIasaSiGQVhrA~l~G~-~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
-||+|-||.||.|.++|. +||||.++++--. .+.+.+||+.|
T Consensus 213 ~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~-------------------------------------~~~f~~Ea~iM 255 (468)
T KOG0197|consen 213 ELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS-------------------------------------PEAFLREAQIM 255 (468)
T ss_pred HhcCCccceEEEEEEcCCCcccceEEeccccC-------------------------------------hhHHHHHHHHH
Confidence 589999999999999876 9999999986110 11234788888
Q ss_pred HHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhh-hhcCCCHHHHHHHHHHHH--HHHHHhCCccccCCC
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVESY--LEQILSHGFFHADPH 455 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l-~~~g~d~~~la~~lv~~~--L~qI~~~GffHaDpH 455 (760)
.+++ |..-|..-.|... ..+.+|||||++-++|.++... ....++..++....++.+ +..|-+++++||||-
T Consensus 256 k~L~----H~~lV~l~gV~~~-~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLA 330 (468)
T KOG0197|consen 256 KKLR----HEKLVKLYGVCTK-QEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLA 330 (468)
T ss_pred HhCc----ccCeEEEEEEEec-CCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhh
Confidence 8774 3344544444422 1257999999999999998765 334455666665555444 777889999999999
Q ss_pred CCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 456 PGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 456 PGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
..||||++ ++.+++.||||++.+.++.-..- .-..--....+++.+..|..+-..|+++|+..+.+++.
T Consensus 331 ARNiLV~~--~~~vKIsDFGLAr~~~d~~Y~~~-----~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT 399 (468)
T KOG0197|consen 331 ARNILVDE--DLVVKISDFGLARLIGDDEYTAS-----EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFT 399 (468)
T ss_pred hhheeecc--CceEEEcccccccccCCCceeec-----CCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhc
Confidence 99999986 88999999999996655432100 00011234567888888888999999999988776654
No 226
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.36 E-value=1.3e-11 Score=130.04 Aligned_cols=183 Identities=17% Similarity=0.178 Sum_probs=121.0
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
++++.|++|+||+|.+ +++.|++|+...... ....+.+|..
T Consensus 25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-------------------------------------~~~~~~~e~~ 67 (286)
T cd06614 25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-------------------------------------NKELIINEIL 67 (286)
T ss_pred HhccCCCCeEEEEEEEccCCcEEEEEEEecCch-------------------------------------hHHHHHHHHH
Confidence 6899999999999999 489999999765321 0011233443
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~~GffHaDp 454 (760)
.+.++ .+...+.+...+ ......+++|||++|.+|.++.......++...+...+. -..+..+|..|++|+|+
T Consensus 68 ~l~~l----~~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl 142 (286)
T cd06614 68 IMKDC----KHPNIVDYYDSY-LVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDI 142 (286)
T ss_pred HHHHC----CCCCeeEEEEEE-EECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCC
Confidence 34333 222223333333 334678999999999999997654332344443333222 23367889999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+|.||+++. ++.++++|||....+....... ....++..++.++...-+..+...|++++...+.+++.
T Consensus 143 ~p~ni~i~~--~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~ 211 (286)
T cd06614 143 KSDNILLSK--DGSVKLADFGFAAQLTKEKSKR------NSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAE 211 (286)
T ss_pred ChhhEEEcC--CCCEEECccchhhhhccchhhh------ccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHh
Confidence 999999985 7899999999987765432211 11123445666666655556678899999988776654
No 227
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.36 E-value=1.2e-11 Score=128.52 Aligned_cols=182 Identities=17% Similarity=0.183 Sum_probs=120.1
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
+.+|.|++|.||+|.+ ++..|++|+.+++-.. ...+.+|+..
T Consensus 12 ~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~-------------------------------------~~~~~~e~~~ 54 (260)
T cd05073 12 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-------------------------------------VEAFLAEANV 54 (260)
T ss_pred eEecCccceEEEEEEecCCccEEEEecCCChhH-------------------------------------HHHHHHHHHH
Confidence 6899999999999998 5778999987663110 0123345554
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~-~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
+.++ .+...+.+...+.+ ...+++|||++|++|.++.... ....+...+...+ +-..+..+|..|++|+|+
T Consensus 55 l~~l----~~~~i~~~~~~~~~--~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl 128 (260)
T cd05073 55 MKTL----QHDKLVKLHAVVTK--EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 128 (260)
T ss_pred HHhc----CCCCcceEEEEEcC--CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence 4443 23333444444433 5679999999999998875432 1122333322222 223367899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|.||+++. ++.++|+|||.+..+.......- ........+++++....+..+...|++++.-.+.+++
T Consensus 129 ~p~ni~i~~--~~~~~l~d~~~~~~~~~~~~~~~-----~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~ 197 (260)
T cd05073 129 RAANILVSA--SLVCKIADFGLARVIEDNEYTAR-----EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 197 (260)
T ss_pred CcceEEEcC--CCcEEECCCcceeeccCCCcccc-----cCCcccccccCHhHhccCCcCccccchHHHHHHHHHH
Confidence 999999985 78999999999987654321100 0011234466777777777777889999987776655
No 228
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.35 E-value=1.1e-11 Score=130.08 Aligned_cols=185 Identities=14% Similarity=0.116 Sum_probs=121.3
Q ss_pred cccccccccEEEEEEE--CCe----eEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGE----EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~----~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~ 372 (760)
+.||.|++|+||+|+. +|+ .|++|+...... .+....+.
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-----------------------------------~~~~~~~~ 57 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-----------------------------------PKANKEIL 57 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-----------------------------------HHHHHHHH
Confidence 6899999999999997 343 689997655321 11112344
Q ss_pred HHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCcc
Q 004334 373 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGFF 450 (760)
Q Consensus 373 ~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~~Gff 450 (760)
+|+..+.++ .+..-+.+..... +...+++|||++|++|.+.........+...+...+. -..+..+|..|++
T Consensus 58 ~e~~~l~~l----~h~~i~~~~~~~~--~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~ 131 (279)
T cd05057 58 DEAYVMASV----DHPHVVRLLGICL--SSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLV 131 (279)
T ss_pred HHHHHHHhC----CCCCcceEEEEEe--cCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 566666655 2222233333332 3678999999999999987644333344444443332 2347889999999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|+|++|.||++++ ++.++|+|||++..+........ .........+++++....+..+...|.+++.-.+.+++
T Consensus 132 H~di~p~nil~~~--~~~~kL~dfg~~~~~~~~~~~~~----~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~ 205 (279)
T cd05057 132 HRDLAARNVLVKT--PQHVKITDFGLAKLLDVDEKEYH----AEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELM 205 (279)
T ss_pred ecccCcceEEEcC--CCeEEECCCcccccccCccccee----cCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHh
Confidence 9999999999985 78999999999987764322110 00011123566677666666777889999887666554
No 229
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.35 E-value=8.7e-12 Score=131.04 Aligned_cols=183 Identities=17% Similarity=0.119 Sum_probs=116.2
Q ss_pred cccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 301 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 301 IasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
||.|++|.||+|.. +|+.|++|+........ ......+..|...+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~---------------------------------~~~~~~~~~e~~~l 47 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKK---------------------------------RKGEQMALNEKKIL 47 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhh---------------------------------hhhhHHHHHHHHHH
Confidence 68899999999987 59999999865421000 00111223455555
Q ss_pred HHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhCCccccCCC
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSHGFFHADPH 455 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~l--v~~~L~qI~~~GffHaDpH 455 (760)
.++. +..-+.+...+ +.....+++|||++|++|.+...... ..+....+.... +-..+..+|..|++|+|++
T Consensus 48 ~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~ 122 (277)
T cd05577 48 EKVS----SRFIVSLAYAF-ETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLK 122 (277)
T ss_pred HhCC----CCCEeeeeeEE-ecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 5542 22222332333 33456799999999999988654322 123333332221 2234678999999999999
Q ss_pred CCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 456 PGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 456 PGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|.||++++ ++.++|+|||.+..+...... ....+...+++++...-+..+...|++++...+.+++
T Consensus 123 p~Nil~~~--~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~ 188 (277)
T cd05577 123 PENVLLDD--HGNVRISDLGLAVELKGGKKI-------KGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMI 188 (277)
T ss_pred HHHEEECC--CCCEEEccCcchhhhccCCcc-------ccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHh
Confidence 99999985 789999999988766432110 0112344556677666565667789999987766554
No 230
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.35 E-value=7.3e-12 Score=130.67 Aligned_cols=188 Identities=15% Similarity=0.186 Sum_probs=117.1
Q ss_pred cccccccccEEEEEEE--CC---eeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KG---EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G---~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~ 373 (760)
+-+|.|++|.||+|++ +| ..||||+......+. ....+..
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~ 54 (269)
T cd05065 10 EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEK-----------------------------------QRRDFLS 54 (269)
T ss_pred eEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHH-----------------------------------HHHHHHH
Confidence 5699999999999998 34 369999876532111 1112344
Q ss_pred HHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccc
Q 004334 374 EAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFH 451 (760)
Q Consensus 374 EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffH 451 (760)
|+..+..+ .+..-+.+... .......++||||++|++|.++........+...+.... +-..+..+|..|++|
T Consensus 55 e~~~l~~l----~h~ni~~~~~~-~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H 129 (269)
T cd05065 55 EASIMGQF----DHPNIIHLEGV-VTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVH 129 (269)
T ss_pred HHHHHHhC----CCcCcceEEEE-ECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 55544444 22222222222 233456799999999999988765433334444443332 223467889999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHH-HHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREG-LLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~-l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|+||.||++++ ++.++++|||....+....... +.... + ......+++++...-+..+...|++++.-.+.+++
T Consensus 130 ~dl~p~nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~-~-~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l 205 (269)
T cd05065 130 RDLAARNILVNS--NLVCKVSDFGLSRFLEDDTSDPTYTSSL-G-GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 205 (269)
T ss_pred cccChheEEEcC--CCcEEECCCccccccccCcccccccccc-C-CCcceeecCHhHhccCcccchhhhhhhHHHHHHHh
Confidence 999999999985 7899999999987664332110 00000 0 00122456677666666677889999887665543
No 231
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.35 E-value=1.6e-11 Score=127.70 Aligned_cols=188 Identities=15% Similarity=0.165 Sum_probs=114.8
Q ss_pred cccccccccEEEEEEE--C---CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--K---GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~---G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~ 373 (760)
+.+|.|++|.||+|++ + +..||||..+.+.... .+ ...+.+
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~--~~--------------------------------~~~~~~ 50 (273)
T cd05035 5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTY--SE--------------------------------IEEFLS 50 (273)
T ss_pred cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCH--HH--------------------------------HHHHHH
Confidence 5799999999999998 2 3789999876432111 00 011233
Q ss_pred HHHHHHHHHHhcCCCCc-eeeceeeeccC-----CCeEEEEeecCCCchhhhhhhhhc-----CCCHHHHHHHH--HHHH
Q 004334 374 EAANAELFASNFKDMDY-VKVPTIFWEYT-----TPQILTMEYVPGIKINRIQSLDEL-----GVDRKRLGRYA--VESY 440 (760)
Q Consensus 374 EA~nl~~f~~~~~~~~~-V~VP~vy~e~s-----t~~vLVME~ieG~~L~d~~~l~~~-----g~d~~~la~~l--v~~~ 440 (760)
|...+..+ ++++ +.+...+.+.. ...+++|||++|++|.++...... ..+...+...+ +-..
T Consensus 51 e~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~a 125 (273)
T cd05035 51 EAACMKDF-----DHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALG 125 (273)
T ss_pred HHHHHHhC-----CCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHH
Confidence 44433333 2222 22222221111 235899999999999876533211 22333332222 2234
Q ss_pred HHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChH
Q 004334 441 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 520 (760)
Q Consensus 441 L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~ 520 (760)
+..+|..|++|+|++|.||++++ ++.++|+|||++..+......... ........+++++....+..+...|++
T Consensus 126 L~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~Dv~ 199 (273)
T cd05035 126 MEYLSNRNFIHRDLAARNCMLRE--DMTVCVADFGLSKKIYSGDYYRQG----RIAKMPVKWIAIESLADRVYTSKSDVW 199 (273)
T ss_pred HHHHHhCCeeccccchheEEECC--CCeEEECCccceeecccccccccc----ccccCCccccCHhhcccCCCCcccchH
Confidence 78899999999999999999986 789999999998876543211000 011122345666666666677889999
Q ss_pred HHHHHHHHHHH
Q 004334 521 AVRRTAQFFLN 531 (760)
Q Consensus 521 al~~~~~~~l~ 531 (760)
++.-.+.+++.
T Consensus 200 SlG~il~el~~ 210 (273)
T cd05035 200 AFGVTMWEIAT 210 (273)
T ss_pred HHHHHHHHHHh
Confidence 99887766553
No 232
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.35 E-value=5.8e-12 Score=137.80 Aligned_cols=189 Identities=19% Similarity=0.260 Sum_probs=117.4
Q ss_pred hhcccC-ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHH
Q 004334 292 VFERFD-VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECA 368 (760)
Q Consensus 292 iF~~fd-~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~ 368 (760)
+...|. .+.||.|++|.||+|+. +|+.||||+........ +..
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------~~~ 59 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNV----------------------------------THA 59 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccCh----------------------------------hHH
Confidence 334453 37899999999999998 69999999753211000 001
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceeeceeeec-----cCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHH
Q 004334 369 SVLYQEAANAELFASNFKDMDYVKVPTIFWE-----YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYL 441 (760)
Q Consensus 369 ~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e-----~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L 441 (760)
..+.+|...+.++. +..-+.+...+.. .....++||||++| ++.+..... ++...+...+ +-..+
T Consensus 60 ~~~~~E~~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~---l~~~~~~~~~~ql~~aL 131 (353)
T cd07850 60 KRAYRELVLMKLVN----HKNIIGLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMD---LDHERMSYLLYQMLCGI 131 (353)
T ss_pred HHHHHHHHHHHhcC----CCCCcceeeeeccCCCccccCcEEEEEeccCC-CHHHHHhhc---CCHHHHHHHHHHHHHHH
Confidence 12234555555442 2222222222211 11246999999987 555543211 3333332222 22347
Q ss_pred HHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHH
Q 004334 442 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTA 521 (760)
Q Consensus 442 ~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~a 521 (760)
..+|..|++|+|++|+||+++. ++.++|+|||++..+...... ....+...+++++...........|+++
T Consensus 132 ~~LH~~gi~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~Dvws 202 (353)
T cd07850 132 KHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMM-------TPYVVTRYYRAPEVILGMGYKENVDIWS 202 (353)
T ss_pred HHHHhCCeeeCCCCHHHEEECC--CCCEEEccCccceeCCCCCCC-------CCCcccccccCHHHHhCCCCCCchhhHh
Confidence 8899999999999999999985 789999999999877653220 0012344566777776666778889999
Q ss_pred HHHHHHHHHH
Q 004334 522 VRRTAQFFLN 531 (760)
Q Consensus 522 l~~~~~~~l~ 531 (760)
++..+.+++.
T Consensus 203 lG~~l~~l~~ 212 (353)
T cd07850 203 VGCIMGEMIR 212 (353)
T ss_pred HHHHHHHHHH
Confidence 9987776653
No 233
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.35 E-value=6.8e-12 Score=145.87 Aligned_cols=142 Identities=18% Similarity=0.203 Sum_probs=103.6
Q ss_pred CccccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHH-HHHHHHHHHH
Q 004334 297 DVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYD-ECASVLYQEA 375 (760)
Q Consensus 297 d~~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~-E~~~~l~~EA 375 (760)
..+.||.|++|.||+|.+.++.+++|+..+.....- .+-+ .....+.+|+
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~-----------------------------~~~~~~~~~~~~~E~ 387 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHP-----------------------------ELDERLRTERTRAEA 387 (535)
T ss_pred ccceeccCCcEEEEEEeecCccceeEEEecccccch-----------------------------hHHHHHHHHHHHHHH
Confidence 357899999999999999888888887554221110 0000 0123456788
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCC
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPH 455 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDpH 455 (760)
+.+.+++ .+++.+|.++.......+|||||++|.+|.++.. ....++..++ ..+.++|..|++|+|+|
T Consensus 388 ~~l~~l~-----~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~------~~~~~~~~i~-~~L~~lH~~giiHrDlk 455 (535)
T PRK09605 388 RLLSEAR-----RAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE------GNPELVRKVG-EIVAKLHKAGIVHGDLT 455 (535)
T ss_pred HHHHhhc-----ccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH------HHHHHHHHHH-HHHHHHHhCCCccCCCC
Confidence 8888774 3456778877766677899999999999988653 1234444444 45788999999999999
Q ss_pred CCcEEEeccCCCcEEEEeecceeccCh
Q 004334 456 PGNIAVDDVNGGRLIFYDFGMMGSISP 482 (760)
Q Consensus 456 PGNILV~~~~~g~l~LiDFG~v~~l~~ 482 (760)
|+||++. +++++++|||+++..++
T Consensus 456 p~NILl~---~~~~~liDFGla~~~~~ 479 (535)
T PRK09605 456 TSNFIVR---DDRLYLIDFGLGKYSDL 479 (535)
T ss_pred hHHEEEE---CCcEEEEeCcccccCCc
Confidence 9999994 67899999999988654
No 234
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.35 E-value=3.1e-12 Score=141.04 Aligned_cols=186 Identities=17% Similarity=0.192 Sum_probs=111.7
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|+. +|+.||||+........ . ....+.+|..
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------~-----~~~~~~~E~~ 51 (372)
T cd07853 6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNL-----------------------------V-----SCKRVFRELK 51 (372)
T ss_pred ceeeeCCCEEEEEEEECCCCCEEEEEeccccccch-----------------------------H-----HHHHHHHHHH
Confidence 6799999999999998 69999999764311100 0 0012334555
Q ss_pred HHHHHHHhcCCCCceeeceeeecc----CCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEY----TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFF 450 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~----st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~Gff 450 (760)
.+..++ +..-+.+-.++..- ....+++|||+++ .+.+.... ...++...+...+ +-..+..+|..|++
T Consensus 52 ~l~~l~----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~iv 125 (372)
T cd07853 52 MLCFFK----HDNVLSALDILQPPHIDPFEEIYVVTELMQS-DLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHSAGIL 125 (372)
T ss_pred HHHhCC----CCCcCCHhheecCCCccccceEEEEeecccc-CHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 444442 22222222222111 1256999999986 45443321 1223333322221 22347889999999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~ 529 (760)
|+|+||.||+++. ++.++|+|||++........... .-..++..++++++... ...+...|+++++-.+.++
T Consensus 126 H~dlkp~Nili~~--~~~~kL~Dfg~a~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el 198 (372)
T cd07853 126 HRDIKPGNLLVNS--NCVLKICDFGLARVEEPDESKHM-----TQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAEL 198 (372)
T ss_pred CCCCChHHEEECC--CCCEEeccccceeecccCccccC-----CCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHH
Confidence 9999999999985 88999999999986644321110 00112445666766543 2345678999999877766
Q ss_pred HH
Q 004334 530 LN 531 (760)
Q Consensus 530 l~ 531 (760)
+.
T Consensus 199 ~~ 200 (372)
T cd07853 199 LG 200 (372)
T ss_pred Hc
Confidence 53
No 235
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.35 E-value=8.7e-13 Score=144.32 Aligned_cols=190 Identities=17% Similarity=0.179 Sum_probs=128.9
Q ss_pred ChhhhhcccCccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHH
Q 004334 288 PLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYD 365 (760)
Q Consensus 288 ~~~~iF~~fd~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~ 365 (760)
++...|..+ +-||.||||.||+|.. .++.||+|+..-+-.+....
T Consensus 10 ~~~~~~~~~--~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIe------------------------------- 56 (467)
T KOG0201|consen 10 DPELLYTKL--ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIE------------------------------- 56 (467)
T ss_pred Ccccccccc--hhccccccceeeeeeeccccceEEEEEechhhcchhhH-------------------------------
Confidence 455566655 4699999999999999 59999999975432221111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCceeeceeeec--cCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHH--HHHHHHHH
Q 004334 366 ECASVLYQEAANAELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLG--RYAVESYL 441 (760)
Q Consensus 366 E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e--~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la--~~lv~~~L 441 (760)
.+.+|..-+..+.. + +|-+.|.. ..+..+++||||.|+++.++...... .+...++ -..+...+
T Consensus 57 ----diqqei~~Ls~~~~-----~--~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~-~~E~~i~~ilre~l~~l 124 (467)
T KOG0201|consen 57 ----DIQQEISVLSQCDS-----P--NITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNI-LDEFEIAVILREVLKGL 124 (467)
T ss_pred ----HHHHHHHHHHhcCc-----c--hHHhhhhheeecccHHHHHHHhcCcchhhhhccCCC-CccceeeeehHHHHHHh
Confidence 11222222222211 1 11111111 24567999999999999987654332 1222222 23344557
Q ss_pred HHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHH
Q 004334 442 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTA 521 (760)
Q Consensus 442 ~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~a 521 (760)
..+|.++.+|+|+|+.||++.. +|.++|.|||.+++++...... .. +.+++-.|+++++...-....+|+++
T Consensus 125 ~ylH~~~kiHrDIKaanil~s~--~g~vkl~DfgVa~ql~~~~~rr--~t----fvGTPfwMAPEVI~~~~Y~~KADIWS 196 (467)
T KOG0201|consen 125 DYLHSEKKIHRDIKAANILLSE--SGDVKLADFGVAGQLTNTVKRR--KT----FVGTPFWMAPEVIKQSGYDTKADIWS 196 (467)
T ss_pred hhhhhcceecccccccceeEec--cCcEEEEecceeeeeechhhcc--cc----ccccccccchhhhccccccchhhhhh
Confidence 8899999999999999999996 6999999999999998776543 22 34789999999999645677899999
Q ss_pred HHHHHHHHH
Q 004334 522 VRRTAQFFL 530 (760)
Q Consensus 522 l~~~~~~~l 530 (760)
++-.+.++.
T Consensus 197 LGITaiEla 205 (467)
T KOG0201|consen 197 LGITAIELA 205 (467)
T ss_pred hhHHHHHHh
Confidence 987665543
No 236
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.35 E-value=1e-11 Score=129.29 Aligned_cols=182 Identities=14% Similarity=0.076 Sum_probs=118.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|.. +++.|++|+...+... ...+.+|.+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-------------------------------------~~~~~~e~~ 54 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-------------------------------------VEEFLKEAA 54 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCchH-------------------------------------HHHHHHHHH
Confidence 5799999999999998 4899999986542110 011233444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHH---HHHHHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLG---RYAVESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la---~~lv~~~L~qI~~~GffHa 452 (760)
.+.++ .+..-+.+...+ ......+++|||++|++|.++..... ...+...+. ..++ ..+..+|..|++|+
T Consensus 55 ~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~-~~l~~lH~~~i~H~ 128 (263)
T cd05052 55 VMKEI----KHPNLVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS-SAMEYLEKKNFIHR 128 (263)
T ss_pred HHHhC----CCCChhheEEEE-cCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHH-HHHHHHHhCCEeec
Confidence 44443 222223333332 23456789999999999998654321 223333332 2233 33678999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|++|.||++++ ++.++|+|||++..+......... .......+++++....+..++..|++++.-.+.+++
T Consensus 129 dlkp~nil~~~--~~~~kl~df~~~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 199 (263)
T cd05052 129 DLAARNCLVGE--NHLVKVADFGLSRLMTGDTYTAHA-----GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 199 (263)
T ss_pred ccCcceEEEcC--CCcEEeCCCccccccccceeeccC-----CCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHH
Confidence 99999999985 889999999999877543221100 011123567777777677777889999988776665
No 237
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.35 E-value=1e-11 Score=131.01 Aligned_cols=119 Identities=13% Similarity=0.039 Sum_probs=77.9
Q ss_pred CCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEeccC-----CCcEEEEe
Q 004334 401 TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVN-----GGRLIFYD 473 (760)
Q Consensus 401 st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDpHPGNILV~~~~-----~g~l~LiD 473 (760)
.+..+|||||++|++|.++.......++.......+ +...+..+|..|++|+|+||.||+++... .+.+++.|
T Consensus 88 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d 167 (274)
T cd05076 88 GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSD 167 (274)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecC
Confidence 356799999999999988764333333433333222 22347889999999999999999997411 22489999
Q ss_pred ecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHH
Q 004334 474 FGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 474 FG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~ 529 (760)
||.......... ..++..+++++.... ...++..|++++.-.+.++
T Consensus 168 ~g~~~~~~~~~~----------~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el 214 (274)
T cd05076 168 PGVSFTALSREE----------RVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI 214 (274)
T ss_pred Cccccccccccc----------cccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHH
Confidence 998755432211 123344566665543 3456778999998766554
No 238
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.35 E-value=7.9e-12 Score=128.65 Aligned_cols=184 Identities=14% Similarity=0.116 Sum_probs=120.0
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|.+|.||+|.. +++.||||+....-.. .+....+.+|+.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------------------------~~~~~~~~~e~~ 51 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT----------------------------------KDERLAAQNECQ 51 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccccc----------------------------------cHHHHHHHHHHH
Confidence 5799999999999998 5899999986542100 011123445666
Q ss_pred HHHHHHHhcCCCCce-eeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V-~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
.++++. ++++ .+... .......+++|||++|.+|.++..... ...+...+...+ +-..+..+|..|++|+
T Consensus 52 ~l~~~~-----~~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~ 125 (256)
T cd08220 52 VLKLLS-----HPNIIEYYEN-FLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHR 125 (256)
T ss_pred HHhhCC-----CCchhheeee-EecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 555552 2222 22222 223456799999999999998764322 223444433322 2233678899999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|++|+||++++ .++.+++.|||+...+....... ...+...+++++.......+...|++++...+.+++
T Consensus 126 dl~~~nil~~~-~~~~~~l~d~~~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~ 195 (256)
T cd08220 126 DLKTQNILLDK-HKMVVKIGDFGISKILSSKSKAY-------TVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELA 195 (256)
T ss_pred CCCHHHEEEcC-CCCEEEEccCCCceecCCCcccc-------ccccCCcccCchhccCCCCCcccchHHHHHHHHHHH
Confidence 99999999975 34568999999998876543211 012344566777766666677789999987766654
No 239
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.35 E-value=1.5e-11 Score=125.16 Aligned_cols=164 Identities=15% Similarity=0.135 Sum_probs=107.1
Q ss_pred cccccccccEEEEEEE-C-------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCC--ccccchHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-K-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSD--GAKRDWVAIYDECA 368 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~-------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~--~~~~~l~~i~~E~~ 368 (760)
-+|++|--+-||.|.. + +..|||||-+....+- +....++.. .+... ..+.+|..++...
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~F--------k~~~~y~~~-~~rf~~~~~k~~~~~~~~~w- 72 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEF--------KNRDKYIKD-DYRFKDRFSKLNPRKIIRMW- 72 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeE--------cChhhhccC-CcccccCcCCCCHHHHHHHH-
Confidence 3789999999999986 3 3799999998764322 111122211 01111 1123455544433
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCC---HHHHHHHHHHHHHHHHH
Q 004334 369 SVLYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVD---RKRLGRYAVESYLEQIL 445 (760)
Q Consensus 369 ~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d---~~~la~~lv~~~L~qI~ 445 (760)
-.+|++++.++++. ++.+|+++. ..+.+|||||++|..+..- .+.....+ ...+...++.....++|
T Consensus 73 --a~kE~r~L~rl~~~-----Gv~vP~pi~--~~~~~lvME~Ig~~~~~~~-~Lkd~~~~~~~~~~i~~~i~~~l~~l~H 142 (197)
T cd05146 73 --AEKEMHNLKRMQKA-----GIPCPEVVV--LKKHVLVMSFIGDDQVPAP-KLKDAKLNDEEMKNAYYQVLSMMKQLYK 142 (197)
T ss_pred --HHHHHHHHHHHHHc-----CCCCCeEEE--ecCCEEEEEEcCCCCccch-hhhccccCHHHHHHHHHHHHHHHHHHHH
Confidence 35799999999753 588999994 4889999999987533210 01111122 22334444555444558
Q ss_pred hCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhH
Q 004334 446 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIR 485 (760)
Q Consensus 446 ~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r 485 (760)
..|++|+||+|.||++. +++++|||||.+...+...-
T Consensus 143 ~~glVHGDLs~~NIL~~---~~~v~iIDF~qav~~~hp~a 179 (197)
T cd05146 143 ECNLVHADLSEYNMLWH---DGKVWFIDVSQSVEPTHPHG 179 (197)
T ss_pred hCCeecCCCCHHHEEEE---CCcEEEEECCCceeCCCCCH
Confidence 99999999999999997 57899999999998876543
No 240
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.35 E-value=7.2e-12 Score=130.56 Aligned_cols=188 Identities=14% Similarity=0.144 Sum_probs=117.3
Q ss_pred cccccccccEEEEEEE--CCe--eEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGE--EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~--~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E 374 (760)
+.||.|++|.||+|+. .++ .||||......... +-...+.+|
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~----------------------------------~~~~~~~~E 50 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTR----------------------------------SEMEDFLSE 50 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCH----------------------------------HHHHHHHHH
Confidence 4689999999999998 343 69999866532111 011233455
Q ss_pred HHHHHHHHHhcCCCCceeeceeeec-----cCCCeEEEEeecCCCchhhhhhhhhc-----CCCHHHHHHHH--HHHHHH
Q 004334 375 AANAELFASNFKDMDYVKVPTIFWE-----YTTPQILTMEYVPGIKINRIQSLDEL-----GVDRKRLGRYA--VESYLE 442 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~V~VP~vy~e-----~st~~vLVME~ieG~~L~d~~~l~~~-----g~d~~~la~~l--v~~~L~ 442 (760)
...+..+ .+..-+.+...... .....+++|||++|++|.++...... .++...+...+ +-..+.
T Consensus 51 ~~~l~~l----~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 126 (272)
T cd05075 51 AVCMKEF----DHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGME 126 (272)
T ss_pred HHHHHhC----CCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHH
Confidence 5555554 22222222222111 12346899999999999876532211 12333332222 223478
Q ss_pred HHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHH
Q 004334 443 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAV 522 (760)
Q Consensus 443 qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al 522 (760)
.+|.+|++|+|+||.||++++ ++.++++|||++..+........ -......+.+++++....+..++..|++++
T Consensus 127 ~lH~~~i~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~~~Di~sl 200 (272)
T cd05075 127 YLSSKSFIHRDLAARNCMLNE--NMNVCVADFGLSKKIYNGDYYRQ----GRIAKMPVKWIAIESLADRVYTTKSDVWSF 200 (272)
T ss_pred HHHHCCeeccccchhheEEcC--CCCEEECCCCcccccCcccceec----CCcccCCcccCCHHHccCCCcChHHHHHHH
Confidence 899999999999999999985 78999999999987754321000 011123455667777666667788899999
Q ss_pred HHHHHHHH
Q 004334 523 RRTAQFFL 530 (760)
Q Consensus 523 ~~~~~~~l 530 (760)
.-.+.+++
T Consensus 201 G~il~el~ 208 (272)
T cd05075 201 GVTMWEIA 208 (272)
T ss_pred HHHHHHHH
Confidence 87776554
No 241
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.35 E-value=1.7e-11 Score=126.66 Aligned_cols=185 Identities=15% Similarity=0.089 Sum_probs=119.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|.|++|+||.++. +|+.|++|.....-.. .+-...+.+|..
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~----------------------------------~~~~~~~~~e~~ 51 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS----------------------------------EKERRDALNEIV 51 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeecccc----------------------------------hhHHHHHHHHHH
Confidence 5799999999999988 6899999975321000 001112345655
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~-~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
.++++ .+..-+.+...+ ......+++|||++|++|.+..... ....+...+...+ +-..+..+|..|++|+|
T Consensus 52 ~l~~~----~h~~i~~~~~~~-~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d 126 (256)
T cd08221 52 ILSLL----QHPNIIAYYNHF-MDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRD 126 (256)
T ss_pred HHHhC----CCCCeeEEEeEE-ecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Confidence 55554 222233333333 3345679999999999999876433 1223434333332 22346788999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
++|.||++++ ++.++++|||.+..+...... .....+...++++++..-...+...|++++...+.+++
T Consensus 127 l~p~ni~~~~--~~~~kl~d~~~~~~~~~~~~~------~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~ 195 (256)
T cd08221 127 IKTLNIFLTK--AGLIKLGDFGISKILGSEYSM------AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELL 195 (256)
T ss_pred CChHhEEEeC--CCCEEECcCcceEEccccccc------ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHH
Confidence 9999999986 789999999999877554310 01122455666777665444556789999987776654
No 242
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.34 E-value=1.9e-11 Score=128.62 Aligned_cols=183 Identities=15% Similarity=0.134 Sum_probs=115.5
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..||.|++|.||+|.. +|..|++|.......+. ...+.+|+.
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------------------------------------~~~~~~e~~ 54 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEE------------------------------------LEDYMVEID 54 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHH------------------------------------HHHHHHHHH
Confidence 4699999999999999 48889999865421111 011233444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+..+ .+..-+.+...+ ......++||||++|..+.++.......++...+.... +-..+..+|..|++|+|+
T Consensus 55 ~l~~l----~h~~ii~~~~~~-~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dl 129 (282)
T cd06643 55 ILASC----DHPNIVKLLDAF-YYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDL 129 (282)
T ss_pred HHHHC----CCCCeeeEEEEE-eeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence 44433 222223333333 23456799999999999987643222234444333332 223478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-----cCCCCCCCChHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-----MGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~-----lG~~~~~~D~~al~~~~~~~ 529 (760)
+|.||+++. +++++++|||++......... .....++..++++++.. ....+...|++++.-.+.++
T Consensus 130 kp~nili~~--~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el 201 (282)
T cd06643 130 KAGNILFTL--DGDIKLADFGVSAKNTRTIQR------RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 201 (282)
T ss_pred CcccEEEcc--CCCEEEccccccccccccccc------cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHH
Confidence 999999985 789999999998766432211 00122455677777763 22334568999988766655
Q ss_pred H
Q 004334 530 L 530 (760)
Q Consensus 530 l 530 (760)
+
T Consensus 202 ~ 202 (282)
T cd06643 202 A 202 (282)
T ss_pred c
Confidence 3
No 243
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.34 E-value=1.3e-11 Score=129.79 Aligned_cols=186 Identities=13% Similarity=0.128 Sum_probs=117.6
Q ss_pred cccccccccEEEEEEEC-------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~-------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
+.||.|++|.||+|+.. ++.||||+.+..... .....+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~-----------------------------------~~~~~~ 55 (283)
T cd05091 11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEG-----------------------------------PLREEF 55 (283)
T ss_pred HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCH-----------------------------------HHHHHH
Confidence 46899999999999872 478999987642211 111223
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh---------------cCCCHHHHHHHH
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRKRLGRYA 436 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~---------------~g~d~~~la~~l 436 (760)
.+|...+..+ .+..-+.+...+ ......++++||+++..+.++..... ...+...+...+
T Consensus 56 ~~e~~~~~~l----~h~~iv~~~~~~-~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (283)
T cd05091 56 KHEAMMRSRL----QHPNIVCLLGVV-TKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIV 130 (283)
T ss_pred HHHHHHHhcC----CCCCcCeEEEEE-cCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHH
Confidence 3344333332 222223333322 22345789999999999988754221 012222222221
Q ss_pred --HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC
Q 004334 437 --VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV 514 (760)
Q Consensus 437 --v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~ 514 (760)
+-..+..+|..|++|+|+||.||++.+ ++.++|+|||++..+........ .+.....+.+++++....+..+
T Consensus 131 ~ql~~aL~~lH~~gi~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~ 204 (283)
T cd05091 131 TQIAAGMEFLSSHHVVHKDLATRNVLVFD--KLNVKISDLGLFREVYAADYYKL----MGNSLLPIRWMSPEAIMYGKFS 204 (283)
T ss_pred HHHHHHHHHHHHcCccccccchhheEecC--CCceEecccccccccccchheee----ccCccCCccccCHHHHhcCCCC
Confidence 223368899999999999999999985 78899999999887754322110 0111123467788877777778
Q ss_pred CCCChHHHHHHHHHHH
Q 004334 515 PTGDTTAVRRTAQFFL 530 (760)
Q Consensus 515 ~~~D~~al~~~~~~~l 530 (760)
+..|++++.-.+.+++
T Consensus 205 ~~~Dv~slG~~l~el~ 220 (283)
T cd05091 205 IDSDIWSYGVVLWEVF 220 (283)
T ss_pred cchhHHHHHHHHHHHH
Confidence 8899999988776654
No 244
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.34 E-value=1.1e-11 Score=127.62 Aligned_cols=186 Identities=20% Similarity=0.160 Sum_probs=114.5
Q ss_pred cccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 301 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 301 IasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
+|+|++|+||+|+. +|+.|++|+..+.-... .+....+.+|...+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~---------------------------------~~~~~~~~~e~~~l 47 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIR---------------------------------KNQVDQVLTERDIL 47 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhh---------------------------------hhHHHHHHHHHHHH
Confidence 58899999999999 49999999875521100 01112233444444
Q ss_pred HHHHHhcCCCCceeeceeeec--cCCCeEEEEeecCCCchhhhhhhhhcCCCHHHH---HHHHHHHHHHHHHhCCccccC
Q 004334 379 ELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIKINRIQSLDELGVDRKRL---GRYAVESYLEQILSHGFFHAD 453 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e--~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~l---a~~lv~~~L~qI~~~GffHaD 453 (760)
.++. +. .+++++.. .....+++|||++|++|.++..... ..+...+ +..++ ..+..+|..|++|+|
T Consensus 48 ~~~~----h~---~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~-~~L~~lH~~~i~H~d 118 (265)
T cd05579 48 SQAQ----SP---YVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIV-LALEYLHSNGIIHRD 118 (265)
T ss_pred HhCC----Cc---chhHHHHheecCcEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHH-HHHHHHHHcCeecCC
Confidence 4332 11 22233222 2345699999999999988654222 2333333 23333 336789999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHH--HHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREG--LLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~--l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
++|.||++++ ++.++|+|||++.......... ..........++..++.++....+..+...|++++...+.+++
T Consensus 119 i~~~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~ 195 (265)
T cd05579 119 LKPDNILIDS--NGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFL 195 (265)
T ss_pred CCHHHeEEcC--CCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHH
Confidence 9999999986 8899999999877543321100 0000011123455566777766665666789999987766654
No 245
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.34 E-value=1e-11 Score=129.70 Aligned_cols=187 Identities=15% Similarity=0.176 Sum_probs=118.7
Q ss_pred cccccccccEEEEEEE--CC---eeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KG---EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G---~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~ 373 (760)
+.||.|.+|.||+|++ +| ..||+|..++..... ....+.+
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------~~~~~~~ 54 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEK-----------------------------------QRRDFLS 54 (267)
T ss_pred eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHH-----------------------------------HHHHHHH
Confidence 6799999999999987 23 479999876532211 1112334
Q ss_pred HHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccc
Q 004334 374 EAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFH 451 (760)
Q Consensus 374 EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffH 451 (760)
|...+.++ .+..-+.+...+ ......+++|||++|++|.++........+...+...+ +-..+..+|..|++|
T Consensus 55 e~~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h 129 (267)
T cd05066 55 EASIMGQF----DHPNIIHLEGVV-TKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVH 129 (267)
T ss_pred HHHHHHhC----CCCCcceEEEEE-ecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 54444444 232333444433 23456799999999999998764333233444333322 223467889999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|+||.||+++. ++.++++|||++..+........ .. .-......+++++....+..++..|++++.-.+.+++
T Consensus 130 ~dlkp~nili~~--~~~~~l~dfg~~~~~~~~~~~~~-~~--~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell 203 (267)
T cd05066 130 RDLAARNILVNS--NLVCKVSDFGLSRVLEDDPEAAY-TT--RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 203 (267)
T ss_pred hhhchhcEEECC--CCeEEeCCCCcccccccccceee-ec--CCCccceeecCHhHhccCccCchhhhHHHHHHHHHHh
Confidence 999999999985 78999999999987754321110 00 0001123456677666666777889999987766544
No 246
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.34 E-value=1.1e-11 Score=130.77 Aligned_cols=182 Identities=19% Similarity=0.230 Sum_probs=117.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|.. +|+.||+|+...+.... ....+.+|..
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~-----------------------------------~~~~~~~E~~ 55 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSS-----------------------------------VRKQILRELQ 55 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcch-----------------------------------HHHHHHHHHH
Confidence 5799999999999998 49999999876532111 1122344544
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh-CCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS-HGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~-~GffHaD 453 (760)
.+..+ +++++.-+.-+.......+|||||++|++|.++.... ..+....+.... +...+..+|. +|++|+|
T Consensus 56 ~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~d 129 (284)
T cd06620 56 IMHEC-----RSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRD 129 (284)
T ss_pred HHHHc-----CCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccC
Confidence 44443 2233322222333446789999999999998865322 122322222221 2223566775 7999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
++|.||++++ +++++++|||++..+...... ...+...+++++....+..+...|++++.-.+.+++.
T Consensus 130 l~p~nil~~~--~~~~~l~d~gl~~~~~~~~~~--------~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~t 197 (284)
T cd06620 130 IKPSNILVNS--RGQIKLCDFGVSGELINSIAD--------TFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELAL 197 (284)
T ss_pred CCHHHEEECC--CCcEEEccCCcccchhhhccC--------ccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHh
Confidence 9999999985 789999999998765332211 1234556667777666666778899999877666553
No 247
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.34 E-value=3.5e-12 Score=133.34 Aligned_cols=187 Identities=20% Similarity=0.263 Sum_probs=121.5
Q ss_pred cccccccccEEEEEEEC------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~ 372 (760)
+-||.|+||.||+|++. +..|+||+..+..... ....+.
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~-----------------------------------~~~~~~ 49 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEE-----------------------------------EEEEFL 49 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHH-----------------------------------HHHHHH
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccc-----------------------------------cceeee
Confidence 46999999999999996 6899999986632211 112234
Q ss_pred HHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhCCc
Q 004334 373 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSHGF 449 (760)
Q Consensus 373 ~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~-~~g~d~~~la~~l--v~~~L~qI~~~Gf 449 (760)
+|++.+.++ .+..-+.+-.+.. ......+||||+++++|.++.... ....+...+...+ +...+..+|..++
T Consensus 50 ~e~~~l~~l----~h~ni~~~~g~~~-~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~i 124 (259)
T PF07714_consen 50 NEIQILRKL----RHPNIVKLYGFCI-ENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNI 124 (259)
T ss_dssp HHHHHHHTH----SBTTBE-EEEEEE-SSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ecccccccc----ccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 455555544 2222233333332 455689999999999999976544 3445555554443 3344788999999
Q ss_pred cccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004334 450 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 450 fHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~ 529 (760)
+|+|++|.||+++. ++.++|.|||+........... ..........+++++...-+..+...|+++|+-.+.++
T Consensus 125 iH~~l~~~nill~~--~~~~Kl~~f~~~~~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei 198 (259)
T PF07714_consen 125 IHGNLSPSNILLDS--NGQVKLSDFGLSRPISEKSKYK----NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEI 198 (259)
T ss_dssp EEST-SGGGEEEET--TTEEEEESTTTGEETTTSSSEE----ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHH
T ss_pred cccccccccccccc--cccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccc
Confidence 99999999999986 7899999999998873211100 00011233455677777777777788999998877665
Q ss_pred HH
Q 004334 530 LN 531 (760)
Q Consensus 530 l~ 531 (760)
+.
T Consensus 199 ~~ 200 (259)
T PF07714_consen 199 LT 200 (259)
T ss_dssp HT
T ss_pred cc
Confidence 43
No 248
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.34 E-value=1.1e-11 Score=129.79 Aligned_cols=183 Identities=18% Similarity=0.142 Sum_probs=120.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..+|+|++|.||+|+. +|+.|++|+........ + ...+.+|..
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~-~~~~~~e~~ 51 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAED----------------------------------E-IEDIQQEIQ 51 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccch----------------------------------H-HHHHHHHHH
Confidence 5799999999999998 58999999864321000 0 012334554
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~~GffHaDp 454 (760)
.+..+. ++++.-+..+.......++||||++|.+|.++.... ..+...+...+. -..+..+|..|++|+|+
T Consensus 52 ~l~~l~-----h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl 124 (274)
T cd06609 52 FLSQCR-----SPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKIHRDI 124 (274)
T ss_pred HHHHcC-----CCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 444442 233322222223346679999999999998875433 233333333222 23356789999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+|.||++++ ++.++++|||++..+........ ...+...++.++....+..++..|++++.-.+.+++.
T Consensus 125 ~p~ni~i~~--~~~~~l~d~g~~~~~~~~~~~~~------~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~t 193 (274)
T cd06609 125 KAANILLSE--EGDVKLADFGVSGQLTSTMSKRN------TFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAK 193 (274)
T ss_pred CHHHEEECC--CCCEEEcccccceeecccccccc------cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHh
Confidence 999999986 88999999999988865421110 0123445667777766667788999999887766653
No 249
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.34 E-value=7.3e-12 Score=131.27 Aligned_cols=186 Identities=19% Similarity=0.169 Sum_probs=118.1
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.|+||+........ .....+.+|..
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~----------------------------------~~~~~~~~e~~ 51 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG----------------------------------GIPNQALREIK 51 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccc----------------------------------hhhHHHHHHHH
Confidence 4699999999999998 58999999876521100 11112334544
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.++++. +..-+.+...+ ......++||||+ |.+|.++.......++...+...+ +-..+..+|..|++|+|+
T Consensus 52 ~l~~~~----~~~i~~~~~~~-~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 125 (286)
T cd07832 52 ALQACQ----HPYVVKLLDVF-PHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDL 125 (286)
T ss_pred HHHhCC----CCCCcceeeEE-ecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCc
Confidence 444442 22222333322 2355679999999 999988754333334444333322 223467899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~~~~~~l~ 531 (760)
||.||++++ ++.++++|||++..+.......+. ...++..+++++..... ...+..|++++...+.+++.
T Consensus 126 ~p~ni~~~~--~~~~~l~dfg~~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~t 196 (286)
T cd07832 126 KPANLLISA--DGVLKIADFGLARLFSEEEPRLYS-----HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLN 196 (286)
T ss_pred CHHHEEEcC--CCcEEEeeeeecccccCCCCCccc-----cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHc
Confidence 999999986 789999999999887654321111 11234455666654332 23567899998877766553
No 250
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.34 E-value=1.4e-11 Score=130.41 Aligned_cols=183 Identities=15% Similarity=0.158 Sum_probs=119.2
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.+.||.|++|.||+|.. +|+.|++|+.+-... .-...+.+|+
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~------------------------------------~~~~~~~~e~ 67 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ------------------------------------QRRELLFNEV 67 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccch------------------------------------hHHHHHHHHH
Confidence 36899999999999997 589999997531100 0011133444
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
..+..+ +++++.-+.-+.......+++|||++|.+|.++... ...+...+...+ +-..+..+|..|++|+|
T Consensus 68 ~~l~~~-----~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~d 140 (285)
T cd06648 68 VIMRDY-----QHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHRD 140 (285)
T ss_pred HHHHHc-----CCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 444433 223322222223345678999999999999987543 223433333322 22336889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
++|.||++++ ++.++|+|||+...+....... ....+...+++++....+..+...|++++...+.+++.
T Consensus 141 l~p~Nil~~~--~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~ 210 (285)
T cd06648 141 IKSDSILLTS--DGRVKLSDFGFCAQVSKEVPRR------KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVD 210 (285)
T ss_pred CChhhEEEcC--CCcEEEcccccchhhccCCccc------ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHh
Confidence 9999999985 8899999999887664432111 01124556677777665666677899999887776654
No 251
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.34 E-value=1.9e-11 Score=129.21 Aligned_cols=184 Identities=15% Similarity=0.135 Sum_probs=115.4
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..+++|++|.||+|+. +|+.||+|+..+.-. ....+.+|..
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-------------------------------------~~~~~~~e~~ 70 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-------------------------------------VDEEIEAEYN 70 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEeccccc-------------------------------------HHHHHHHHHH
Confidence 5799999999999998 589999998765210 0011233444
Q ss_pred HHHHHHHhcCCCCceeeceeeecc----CCCeEEEEeecCCCchhhhhhh---hhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEY----TTPQILTMEYVPGIKINRIQSL---DELGVDRKRLGRYA--VESYLEQILSH 447 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~----st~~vLVME~ieG~~L~d~~~l---~~~g~d~~~la~~l--v~~~L~qI~~~ 447 (760)
.+.++. .+..-+.+...+... ....++||||++|++|.++... .........+...+ +-..++.+|..
T Consensus 71 ~l~~l~---~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 147 (291)
T cd06639 71 ILQSLP---NHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN 147 (291)
T ss_pred HHHHhc---CCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 444432 122223333333211 2357999999999999886532 11122333322222 22347889999
Q ss_pred CccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC-----CCCCCChHHH
Q 004334 448 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV-----LVPTGDTTAV 522 (760)
Q Consensus 448 GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~-----~~~~~D~~al 522 (760)
|++|+|++|+||+++. ++.++++|||.+..+....... ....+...+++++....+. .+...|++++
T Consensus 148 ~ivH~dlkp~nili~~--~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~sl 219 (291)
T cd06639 148 RIIHRDVKGNNILLTT--EGGVKLVDFGVSAQLTSTRLRR------NTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSL 219 (291)
T ss_pred CeeccCCCHHHEEEcC--CCCEEEeecccchhcccccccc------cCccCCccccChhhhcCCCCcccccCCccchHHH
Confidence 9999999999999985 7899999999988765432111 0112445566676654432 3567899999
Q ss_pred HHHHHHHH
Q 004334 523 RRTAQFFL 530 (760)
Q Consensus 523 ~~~~~~~l 530 (760)
...+.+++
T Consensus 220 Gvi~~el~ 227 (291)
T cd06639 220 GITAIELG 227 (291)
T ss_pred HHHHHHHh
Confidence 87766654
No 252
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.34 E-value=1.3e-11 Score=130.26 Aligned_cols=189 Identities=15% Similarity=0.137 Sum_probs=116.4
Q ss_pred cccccccccEEEEEEE-----CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-----~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~ 373 (760)
+.||.|++|+||+|+. +|+.||||+.+...... . .+....+.+
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~----------------------------~----~~~~~~~~~ 53 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQ----------------------------K----AKTAEHTRT 53 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHh----------------------------h----hhHHHHHHH
Confidence 5799999999999986 36889999875410000 0 011122334
Q ss_pred HHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccc
Q 004334 374 EAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFH 451 (760)
Q Consensus 374 EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffH 451 (760)
|...+.++. +++.+.-...........++||||++|++|.+..... ..+....+...+ +...+..+|..|++|
T Consensus 54 E~~~l~~~~----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~~~H 128 (288)
T cd05583 54 ERQVLEAVR----RCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQLGIIY 128 (288)
T ss_pred HHHHHHhcc----CCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 555555442 2333222222223445678999999999998764321 223333333222 223467889999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC--CCCCCChHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV--LVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~--~~~~~D~~al~~~~~~~ 529 (760)
+|+||.||+++. ++.++++|||++..+....... .....++..+++++....+. .....|++++...+.++
T Consensus 129 ~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el 201 (288)
T cd05583 129 RDIKLENILLDS--EGHVVLTDFGLSKEFLAEEEER-----AYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFEL 201 (288)
T ss_pred cCCCHHHeEECC--CCCEEEEECccccccccccccc-----cccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHH
Confidence 999999999985 7899999999987765432110 01123455566676655443 45678999988776655
Q ss_pred HH
Q 004334 530 LN 531 (760)
Q Consensus 530 l~ 531 (760)
+.
T Consensus 202 ~t 203 (288)
T cd05583 202 LT 203 (288)
T ss_pred Hh
Confidence 43
No 253
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.34 E-value=1.3e-11 Score=128.11 Aligned_cols=194 Identities=14% Similarity=0.118 Sum_probs=121.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|.. +|+.||+|+.++....... -.+....+.+|++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~------------------------------~~~~~~~~~~e~~ 55 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSE------------------------------QEEVVEALRKEIR 55 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchh------------------------------HHHHHHHHHHHHH
Confidence 5799999999999998 6899999987652211100 0112234556666
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHaDp 454 (760)
.+.+++ +...+.+...+ ......+++|||++|.+|.++.... ...+...+... .+-..+..+|..|++|+|+
T Consensus 56 ~l~~l~----h~~iv~~~~~~-~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i 129 (268)
T cd06630 56 LMARLN----HPHIIRMLGAT-CEDSHFNLFVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHENQIIHRDV 129 (268)
T ss_pred HHHHcC----CCceehhhcee-ccCCeEEEEEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 666652 22222222222 2335679999999999999875422 22333333222 2223467899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+|.||+++. .+..++|+|||+...+....... ........+...+++++...-...+...|++++...+.+++.
T Consensus 130 ~~~nil~~~-~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~ 203 (268)
T cd06630 130 KGANLLIDS-TGQRLRIADFGAAARLAAKGTGA--GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMAT 203 (268)
T ss_pred CHHHEEEcC-CCCEEEEcccccccccccccccC--CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHh
Confidence 999999974 23469999999998876532110 000011123445666666654555677899999887776653
No 254
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.34 E-value=1.4e-11 Score=131.32 Aligned_cols=187 Identities=15% Similarity=0.102 Sum_probs=116.2
Q ss_pred ccccccccccEEEEEEE---------CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL---------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECA 368 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l---------~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~ 368 (760)
..+||.|++|.||+|+. ++..||+|+.+...... -.
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~-----------------------------------~~ 64 (304)
T cd05101 20 GKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEK-----------------------------------DL 64 (304)
T ss_pred cceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchH-----------------------------------HH
Confidence 37899999999999974 24579999876532111 01
Q ss_pred HHHHHHHHHHHHHHHhcCCCCc-eeeceeeeccCCCeEEEEeecCCCchhhhhhhhhc---------------CCCHHHH
Q 004334 369 SVLYQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL---------------GVDRKRL 432 (760)
Q Consensus 369 ~~l~~EA~nl~~f~~~~~~~~~-V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~---------------g~d~~~l 432 (760)
..+.+|...+..+. ++++ +.+...+ ......+++|||++|++|.++...... .++...+
T Consensus 65 ~~~~~E~~~l~~l~----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (304)
T cd05101 65 SDLVSEMEMMKMIG----KHKNIINLLGAC-TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDL 139 (304)
T ss_pred HHHHHHHHHHHhhc----cCCCchheeEEE-ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHH
Confidence 12334444444431 2222 2233322 234567899999999999987643211 1222222
Q ss_pred HHH--HHHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc
Q 004334 433 GRY--AVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM 510 (760)
Q Consensus 433 a~~--lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l 510 (760)
... .+-..+..+|.+|++|+|++|.||++++ ++.++|+|||.+..+......... ........+++++...-
T Consensus 140 ~~~~~qi~~al~~LH~~givH~dlkp~Nili~~--~~~~kl~D~g~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~ 213 (304)
T cd05101 140 VSCTYQVARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDVNNIDYYKKT----TNGRLPVKWMAPEALFD 213 (304)
T ss_pred HHHHHHHHHHHHHHHHCCeeecccccceEEEcC--CCcEEECCCccceecccccccccc----cCCCCCceeeCchhhcc
Confidence 222 1233468899999999999999999985 789999999999877543221100 00112234667776665
Q ss_pred CCCCCCCChHHHHHHHHHHH
Q 004334 511 GVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 511 G~~~~~~D~~al~~~~~~~l 530 (760)
+..+...|++++...+.+++
T Consensus 214 ~~~~~~~Di~slG~~l~el~ 233 (304)
T cd05101 214 RVYTHQSDVWSFGVLMWEIF 233 (304)
T ss_pred CCCCchhhHHHHHHHHHHHH
Confidence 65677789999987665543
No 255
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.33 E-value=1.8e-11 Score=128.03 Aligned_cols=177 Identities=14% Similarity=0.091 Sum_probs=109.8
Q ss_pred ccccccccEEEEEEEC--------------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHH
Q 004334 300 PIAAASLGQVHRARLK--------------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYD 365 (760)
Q Consensus 300 PIasaSiGQVhrA~l~--------------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~ 365 (760)
.||.|.+|+||+|++. +..|++|+..+...+
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~----------------------------------- 46 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRD----------------------------------- 46 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhh-----------------------------------
Confidence 5899999999999862 235899986652111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCce-eeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHH
Q 004334 366 ECASVLYQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLE 442 (760)
Q Consensus 366 E~~~~l~~EA~nl~~f~~~~~~~~~V-~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~ 442 (760)
....+.+|+..+..+ +++++ .+.... ......+++|||++|+++..+........+...+.... +...+.
T Consensus 47 -~~~~~~~~~~~l~~l-----~hp~iv~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 119 (262)
T cd05077 47 -ISLAFFETASMMRQV-----SHKHIVLLYGVC-VRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALS 119 (262)
T ss_pred -HHHHHHHHHHHHHhC-----CCCCEeeEEEEE-ecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 111233444444433 22332 222222 23346799999999999987654322233443332222 223478
Q ss_pred HHHhCCccccCCCCCcEEEeccCCC-------cEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCC
Q 004334 443 QILSHGFFHADPHPGNIAVDDVNGG-------RLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLV 514 (760)
Q Consensus 443 qI~~~GffHaDpHPGNILV~~~~~g-------~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~-lG~~~ 514 (760)
.+|..|++|+|++|.||++.. ++ .+++.|||.+..+..... ..++..+++++... .+..+
T Consensus 120 ~lH~~~ivH~dlkp~Nill~~--~~~~~~~~~~~~l~d~g~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~ 187 (262)
T cd05077 120 YLEDKDLVHGNVCTKNILLAR--EGIDGECGPFIKLSDPGIPITVLSRQE----------CVERIPWIAPECVEDSKNLS 187 (262)
T ss_pred HhhhCCeECCCCCcccEEEec--CCccCCCCceeEeCCCCCCccccCccc----------ccccccccChhhhcCCCCCC
Confidence 899999999999999999974 33 389999998866532210 12344566777654 34456
Q ss_pred CCCChHHHHHHHHHHH
Q 004334 515 PTGDTTAVRRTAQFFL 530 (760)
Q Consensus 515 ~~~D~~al~~~~~~~l 530 (760)
...|++++.-.+.+++
T Consensus 188 ~~~DiwslG~~l~el~ 203 (262)
T cd05077 188 IAADKWSFGTTLWEIC 203 (262)
T ss_pred chhHHHHHHHHHHHHH
Confidence 6789999987766554
No 256
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.33 E-value=3.7e-12 Score=141.93 Aligned_cols=179 Identities=11% Similarity=0.088 Sum_probs=115.2
Q ss_pred cccccccccEEEEEEE----CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l----~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E 374 (760)
..||.|++|.||+|.. .++.||||+...+. . ..+|
T Consensus 98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--~---------------------------------------~~~E 136 (392)
T PHA03207 98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--T---------------------------------------PGRE 136 (392)
T ss_pred EeecCCCCeEEEEEEEcCCccceeEEEEeccccc--c---------------------------------------HHHH
Confidence 5799999999999986 25789999765421 0 1234
Q ss_pred HHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 375 AANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
.+.+.++ .+..-+.+...+ ......+++||++.| .+.++.. ....+....+.... +-..+..+|..|++|+
T Consensus 137 ~~il~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH~~givHr 209 (392)
T PHA03207 137 IDILKTI----SHRAIINLIHAY-RWKSTVCMVMPKYKC-DLFTYVD-RSGPLPLEQAITIQRRLLEALAYLHGRGIIHR 209 (392)
T ss_pred HHHHHhc----CCCCccceeeeE-eeCCEEEEEehhcCC-CHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 4444443 122122222222 334567999999976 4444432 11223333332222 2234788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
|+||.|||++. ++.++|+|||++..+.......-. ....++..++++++...+......|++++.-.+.+++.
T Consensus 210 Dlkp~Nill~~--~~~~~l~DfG~a~~~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~ 282 (392)
T PHA03207 210 DVKTENIFLDE--PENAVLGDFGAACKLDAHPDTPQC----YGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSV 282 (392)
T ss_pred CCCHHHEEEcC--CCCEEEccCccccccCcccccccc----cccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHH
Confidence 99999999985 789999999999776543211100 11235677788888877777778999999988777653
No 257
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.33 E-value=1.2e-11 Score=128.28 Aligned_cols=185 Identities=14% Similarity=0.110 Sum_probs=115.5
Q ss_pred ccccccccEEEEEEE----CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 300 PIasaSiGQVhrA~l----~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.||.|++|.||+|.+ ++..||||+.+...... .....+.+|.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~----------------------------------~~~~~~~~e~ 47 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDP----------------------------------ALKDELLREA 47 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcH----------------------------------HHHHHHHHHH
Confidence 489999999999975 47899999875432110 0112233444
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
..+.++ .+..-+.+...+ .....+++|||++|++|.++..... ..+...+.... +-..+..+|..|++|+|
T Consensus 48 ~~l~~l----~h~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~i~H~d 120 (257)
T cd05116 48 NVMQQL----DNPYIVRMIGIC--EAESWMLVMELAELGPLNKFLQKNK-HVTEKNITELVHQVSMGMKYLEETNFVHRD 120 (257)
T ss_pred HHHHhC----CCCCcceEEEEE--cCCCcEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence 444433 222222222221 1345689999999999988764322 23333333222 22346889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+||.||++++ ++.++++|||++..+.......... ........+++++....+..+...|++++.-.+.+++
T Consensus 121 lkp~nill~~--~~~~kl~Dfg~~~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 192 (257)
T cd05116 121 LAARNVLLVT--QHYAKISDFGLSKALGADENYYKAK---THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAF 192 (257)
T ss_pred cchhhEEEcC--CCeEEECCCccccccCCCCCeeeec---CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHH
Confidence 9999999985 7899999999998765432210000 0001124566777776666777889999987776654
No 258
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.33 E-value=8.9e-12 Score=130.93 Aligned_cols=182 Identities=13% Similarity=0.171 Sum_probs=114.4
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|.|++|+||+|+. +|+.||+|+....-.. ...+..|..
T Consensus 22 ~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~-------------------------------------~~~~~~e~~ 64 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDE-------------------------------------EEEIKLEIN 64 (282)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecChHH-------------------------------------HHHHHHHHH
Confidence 5799999999999999 5899999986432100 011223333
Q ss_pred HHHHHHHhcCCCCceeeceeeec--------cCCCeEEEEeecCCCchhhhhhhhhc-CCCHHHHHHH--HHHHHHHHHH
Q 004334 377 NAELFASNFKDMDYVKVPTIFWE--------YTTPQILTMEYVPGIKINRIQSLDEL-GVDRKRLGRY--AVESYLEQIL 445 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e--------~st~~vLVME~ieG~~L~d~~~l~~~-g~d~~~la~~--lv~~~L~qI~ 445 (760)
.+.++. +++++ .+.+.. .....+++|||++|++|.++...... ..+...+... .+-..+..+|
T Consensus 65 ~l~~~~----~h~~i--~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH 138 (282)
T cd06636 65 MLKKYS----HHRNI--ATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH 138 (282)
T ss_pred HHHHhc----CCCcE--EEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 344332 22222 222221 12356899999999999887643222 2333322222 2334478899
Q ss_pred hCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCCCCCChH
Q 004334 446 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVLVPTGDTT 520 (760)
Q Consensus 446 ~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-----G~~~~~~D~~ 520 (760)
..|++|+|++|.||++++ ++.++|+|||++..+....... ....++..+++++.+.. ...+...|++
T Consensus 139 ~~~ivH~dl~~~nili~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~l~~~~~~~~~~~~~~Dvw 210 (282)
T cd06636 139 AHKVIHRDIKGQNVLLTE--NAEVKLVDFGVSAQLDRTVGRR------NTFIGTPYWMAPEVIACDENPDATYDYRSDIW 210 (282)
T ss_pred HCCcccCCCCHHHEEECC--CCCEEEeeCcchhhhhccccCC------CcccccccccCHhhcCcccCcCcCCCcccchh
Confidence 999999999999999986 7899999999987664322110 11224556677776542 2234567999
Q ss_pred HHHHHHHHHHH
Q 004334 521 AVRRTAQFFLN 531 (760)
Q Consensus 521 al~~~~~~~l~ 531 (760)
++...+.+++.
T Consensus 211 slG~~l~el~~ 221 (282)
T cd06636 211 SLGITAIEMAE 221 (282)
T ss_pred HHHHHHHHHHh
Confidence 99887766653
No 259
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.33 E-value=8.5e-12 Score=133.68 Aligned_cols=189 Identities=14% Similarity=0.131 Sum_probs=114.7
Q ss_pred cCccccccccccEEEEEEE----CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 296 FDVEPIAAASLGQVHRARL----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 296 fd~~PIasaSiGQVhrA~l----~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
++...||.|++|.||+|+. +++.||||+....-. ....
T Consensus 4 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--------------------------------------~~~~ 45 (317)
T cd07868 4 YEGCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--------------------------------------SMSA 45 (317)
T ss_pred ccccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--------------------------------------cHHH
Confidence 3456899999999999996 357899997654210 0012
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeeeccC-CCeEEEEeecCCCchhhhhhhhh--------cCCCHHH---HHHHHHHH
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFWEYT-TPQILTMEYVPGIKINRIQSLDE--------LGVDRKR---LGRYAVES 439 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~e~s-t~~vLVME~ieG~~L~d~~~l~~--------~g~d~~~---la~~lv~~ 439 (760)
.+|++.+.++ .+..-+.+..++.... ...+++|||+++ .+.++..... ..++... ++..++ .
T Consensus 46 ~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~-~ 119 (317)
T cd07868 46 CREIALLREL----KHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL-D 119 (317)
T ss_pred HHHHHHHHhc----CCCCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHH-H
Confidence 3455555544 2333344444443322 345899999976 5555432211 1122222 222222 3
Q ss_pred HHHHHHhCCccccCCCCCcEEEec--cCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCC
Q 004334 440 YLEQILSHGFFHADPHPGNIAVDD--VNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPT 516 (760)
Q Consensus 440 ~L~qI~~~GffHaDpHPGNILV~~--~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~ 516 (760)
.+..+|..|++|+|+||.|||+.. ..++.++|+|||++..++..... ... ..-..++..++++++... ...+..
T Consensus 120 al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~-~~~--~~~~~~t~~y~aPE~~~~~~~~~~~ 196 (317)
T cd07868 120 GIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP-LAD--LDPVVVTFWYRAPELLLGARHYTKA 196 (317)
T ss_pred HHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcc-ccc--cCCccccccccCCHHHcCCCCcCch
Confidence 477899999999999999999952 13578999999999876543211 000 001123455777776654 335667
Q ss_pred CChHHHHHHHHHHHH
Q 004334 517 GDTTAVRRTAQFFLN 531 (760)
Q Consensus 517 ~D~~al~~~~~~~l~ 531 (760)
.|++++.-.+.+++.
T Consensus 197 ~DiwslG~il~el~~ 211 (317)
T cd07868 197 IDIWAIGCIFAELLT 211 (317)
T ss_pred hhHHHHHHHHHHHHh
Confidence 899999987766654
No 260
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.33 E-value=9.7e-12 Score=130.48 Aligned_cols=185 Identities=15% Similarity=0.136 Sum_probs=113.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||+|++|+||+|+. +|+.||||+.+...... .....+.+|+.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~~~~~~~~e~~ 51 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEE----------------------------------GVPSTAIREIS 51 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccC----------------------------------CchHHHHHHHH
Confidence 5799999999999998 58999999875421100 00112334555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhh-hh-cCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DE-LGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l-~~-~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
.+.++. +..-+.+...+ ......++||||++| .+.++... .. ..++...+...+ +-..+..+|..|++|+
T Consensus 52 ~l~~l~----h~~i~~~~~~~-~~~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~ 125 (285)
T cd07861 52 LLKELQ----HPNIVCLQDVL-MQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHR 125 (285)
T ss_pred HHHhcC----CCCEeeeEEEE-eeCCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 555542 22222333322 234567999999986 56554322 11 223444433222 2234688999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~~~~~~l~ 531 (760)
|++|.||+++. ++.++|+|||++..+....+.. ....+...+++++..... ..+...|+++++-.+.+++.
T Consensus 126 dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~t 197 (285)
T cd07861 126 DLKPQNLLIDN--KGVIKLADFGLARAFGIPVRVY------THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMAT 197 (285)
T ss_pred CCCHHHEEEcC--CCcEEECcccceeecCCCcccc------cCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHH
Confidence 99999999985 8899999999988664432110 000123445666655332 23556799998877666553
No 261
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.33 E-value=7.8e-12 Score=133.18 Aligned_cols=185 Identities=14% Similarity=0.091 Sum_probs=112.4
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.+.||.|++|.||+|+. +|+.||+|..+....... ...+.+|.
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~E~ 55 (301)
T cd07873 11 LDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGA-----------------------------------PCTAIREV 55 (301)
T ss_pred eeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCc-----------------------------------hhHHHHHH
Confidence 36899999999999998 589999998764321110 00122344
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
..+.++ .+..-+.+...+ ......++||||++| ++.+.........+...+...+ +-..+..+|..|++|+|
T Consensus 56 ~~l~~l----~h~nI~~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~d 129 (301)
T cd07873 56 SLLKDL----KHANIVTLHDII-HTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRD 129 (301)
T ss_pred HHHHhc----CCCCcceEEEEE-ecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence 444444 222222333332 233557999999986 5655443222234443333322 22347889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~l~ 531 (760)
+||+||+++. ++.++++|||++..........- .......+++++.... ...+...|++++...+.+++.
T Consensus 130 lkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~------~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t 200 (301)
T cd07873 130 LKPQNLLINE--RGELKLADFGLARAKSIPTKTYS------NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMST 200 (301)
T ss_pred CCHHHEEECC--CCcEEECcCcchhccCCCCCccc------ccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHh
Confidence 9999999985 78999999999876543221100 0012344555655432 224456799998877766543
No 262
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=99.33 E-value=2.5e-11 Score=124.85 Aligned_cols=81 Identities=32% Similarity=0.632 Sum_probs=63.6
Q ss_pred ceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEEeccCCCcE
Q 004334 390 YVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRL 469 (760)
Q Consensus 390 ~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l 469 (760)
.+.+-+-.+.+++..+|+||||||.+++++..+. ..++..++ ..++++|.+|++|+||||||++++ ++.+
T Consensus 104 yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~i~------e~~~~ki~-~~ikqlH~~G~~HGD~hpgNFlv~---~~~i 173 (229)
T PF06176_consen 104 YLAAEKKIFRYTSSYVLLMEYIEGVELNDIEDID------EDLAEKIV-EAIKQLHKHGFYHGDPHPGNFLVS---NNGI 173 (229)
T ss_pred eeeeeeeeccceeEEEEEEEEecCeecccchhcC------HHHHHHHH-HHHHHHHHcCCccCCCCcCcEEEE---CCcE
Confidence 3444455567888899999999999999875432 23444444 468999999999999999999997 4669
Q ss_pred EEEeecceecc
Q 004334 470 IFYDFGMMGSI 480 (760)
Q Consensus 470 ~LiDFG~v~~l 480 (760)
+++||+..+..
T Consensus 174 ~iID~~~k~~~ 184 (229)
T PF06176_consen 174 RIIDTQGKRMS 184 (229)
T ss_pred EEEECcccccc
Confidence 99999988764
No 263
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.33 E-value=9.8e-12 Score=129.97 Aligned_cols=186 Identities=17% Similarity=0.161 Sum_probs=117.6
Q ss_pred cccccccccEEEEEEEC------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~ 372 (760)
+.||.|++|.||+|+++ |+.||||+.++.... +....+.
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-----------------------------------~~~~~~~ 54 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-----------------------------------QHRSDFE 54 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-----------------------------------HHHHHHH
Confidence 57999999999999972 689999998764221 0111233
Q ss_pred HHHHHHHHHHHhcCCCCceeeceeee--cc--CCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004334 373 QEAANAELFASNFKDMDYVKVPTIFW--EY--TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 446 (760)
Q Consensus 373 ~EA~nl~~f~~~~~~~~~V~VP~vy~--e~--st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~ 446 (760)
+|...+..+ .+ ++ +++.+. .. ....+++|||++|.+|.++........+...+.... +-..+..+|.
T Consensus 55 ~ei~~l~~l----~~-~~--i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~ 127 (284)
T cd05038 55 REIEILRTL----DH-EN--IVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGS 127 (284)
T ss_pred HHHHHHHhC----CC-CC--hheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHh
Confidence 444444433 12 22 223221 22 235799999999999998764333234444333322 2234678899
Q ss_pred CCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004334 447 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 526 (760)
Q Consensus 447 ~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~ 526 (760)
.|++|+|++|.||+++. ++.++|.|||++..+......... .........+++++....+......|++++.-.+
T Consensus 128 ~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l 202 (284)
T cd05038 128 QRYIHRDLAARNILVES--EDLVKISDFGLAKVLPEDKDYYYV---KEPGESPIFWYAPECLRTSKFSSASDVWSFGVTL 202 (284)
T ss_pred CCeecCCCCHHhEEEcC--CCCEEEcccccccccccCCcceec---cCCCCCcccccCcHHHccCCCCcccchHHHhhhh
Confidence 99999999999999985 789999999999988643211000 0001122234556666556667778999998777
Q ss_pred HHHHH
Q 004334 527 QFFLN 531 (760)
Q Consensus 527 ~~~l~ 531 (760)
.+++.
T Consensus 203 ~el~t 207 (284)
T cd05038 203 YELFT 207 (284)
T ss_pred heeec
Confidence 66654
No 264
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.33 E-value=3.4e-11 Score=129.54 Aligned_cols=193 Identities=18% Similarity=0.194 Sum_probs=120.6
Q ss_pred hCCChhhhhcccCccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHH
Q 004334 285 LGAPLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVA 362 (760)
Q Consensus 285 lG~~~~~iF~~fd~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~ 362 (760)
++..++++|..+. .+|.|++|.||+|+. +|+.|++|+........
T Consensus 15 ~~~~~~~~~~~~~--~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~------------------------------- 61 (313)
T cd06633 15 YKDDPEEIFVGLH--EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQT------------------------------- 61 (313)
T ss_pred ccCCHHHHhhcce--eeccCCCeEEEEEEECCCCcEEEEEEEeccccCc-------------------------------
Confidence 4466777766554 599999999999998 68999999865421100
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHH
Q 004334 363 IYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESY 440 (760)
Q Consensus 363 i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~ 440 (760)
......+.+|...+.++. +...+.+..++. .....+++|||+.| .+.+........++...+...+ +-..
T Consensus 62 --~~~~~~~~~E~~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~a 133 (313)
T cd06633 62 --NEKWQDIIKEVKFLQQLK----HPNTIEYKGCYL-KEHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQG 133 (313)
T ss_pred --hHHHHHHHHHHHHHHhCC----CCCCccEEEEEE-eCCEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 000112344555555442 222233333332 23557999999987 4555433222234443333322 2234
Q ss_pred HHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cCCCCCCC
Q 004334 441 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MGVLVPTG 517 (760)
Q Consensus 441 L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~---lG~~~~~~ 517 (760)
+..+|..|++|+|++|.||++++ ++.++|+|||++....+... ..++..++++++.. -+......
T Consensus 134 l~~LH~~gi~H~dl~p~nili~~--~~~~kL~dfg~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~~~s 201 (313)
T cd06633 134 LAYLHSHNMIHRDIKAGNILLTE--PGQVKLADFGSASKSSPANS----------FVGTPYWMAPEVILAMDEGQYDGKV 201 (313)
T ss_pred HHHHHHCCeecCCCChhhEEECC--CCCEEEeecCCCcccCCCCC----------ccccccccChhhccccCCCCCCchh
Confidence 78899999999999999999985 78999999998865433211 12344566777653 24456678
Q ss_pred ChHHHHHHHHHHH
Q 004334 518 DTTAVRRTAQFFL 530 (760)
Q Consensus 518 D~~al~~~~~~~l 530 (760)
|++++...+.+++
T Consensus 202 Dv~slGvil~el~ 214 (313)
T cd06633 202 DVWSLGITCIELA 214 (313)
T ss_pred hHHHHHHHHHHHH
Confidence 9999987766554
No 265
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.33 E-value=7.5e-12 Score=131.33 Aligned_cols=185 Identities=19% Similarity=0.218 Sum_probs=118.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|+. +|+.|+||+.+..... .+....+.+|.+
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~----------------------------------~~~~~~~~~e~~ 52 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD----------------------------------EDVKKTALREVK 52 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhccc----------------------------------ccchhHHHHHHH
Confidence 5799999999999998 5899999986542110 011223445555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+.++. +..-+.+..++. .....+++|||++|..+..+... ..+.+...+.... +-..+..+|..|++|+|+
T Consensus 53 ~l~~l~----~~~i~~~~~~~~-~~~~~~iv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl 126 (288)
T cd07833 53 VLRQLR----HENIVNLKEAFR-RKGRLYLVFEYVERTLLELLEAS-PGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDI 126 (288)
T ss_pred HHHhcC----CCCeeehhheEE-ECCEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 555552 222233333332 23557999999999777654322 2234444333322 223478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~~~~~~l 530 (760)
+|.||++++ ++.++|+|||.+..+......... ...+...++++++.... ..+...|++++...+.+++
T Consensus 127 ~~~ni~~~~--~~~~kl~d~g~~~~~~~~~~~~~~-----~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~ 196 (288)
T cd07833 127 KPENILVSE--SGVLKLCDFGFARALRARPASPLT-----DYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELL 196 (288)
T ss_pred CHHHeEECC--CCCEEEEeeecccccCCCcccccc-----CcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHH
Confidence 999999986 889999999999887655431111 01123345566665544 4566789999887666554
No 266
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.32 E-value=2.7e-11 Score=125.27 Aligned_cols=189 Identities=20% Similarity=0.138 Sum_probs=119.9
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+++|.|++|+||+|.. +|..|++|+........ ....+.+|+.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------~~~~~~~e~~ 51 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-----------------------------------SVDELRKEVQ 51 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-----------------------------------HHHHHHHHHH
Confidence 6799999999999998 68999999864321100 0112334444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh--cCCCHHHHHHHHH--HHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE--LGVDRKRLGRYAV--ESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~--~g~d~~~la~~lv--~~~L~qI~~~GffHa 452 (760)
.+..+ .+...+.+...+ ......+++|||++|.+|.++..... ..++...+...+. -..+..+|..|++|+
T Consensus 52 ~l~~l----~~~~i~~~~~~~-~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~ 126 (267)
T cd06610 52 AMSQC----NHPNVVKYYTSF-VVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHR 126 (267)
T ss_pred HHHhc----CCCCEEEEEEEE-eeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 44433 222222222222 33456799999999999998764321 2334433333222 233678899999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~~~~~~l~ 531 (760)
|++|.||++++ ++.++|+|||++..+........ . ......+...++.++....+ ..+...|++++...+.+++.
T Consensus 127 ~l~p~ni~~~~--~~~~~l~df~~~~~~~~~~~~~~-~-~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~ 202 (267)
T cd06610 127 DIKAGNILLGE--DGSVKIADFGVSASLADGGDRTR-K-VRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELAT 202 (267)
T ss_pred CCCHHhEEEcC--CCCEEEcccchHHHhccCccccc-c-ccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHh
Confidence 99999999986 78999999999887765432210 0 01111234556667666555 56677899999877766553
No 267
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.32 E-value=2e-11 Score=127.54 Aligned_cols=182 Identities=14% Similarity=0.050 Sum_probs=111.6
Q ss_pred ccccccccEEEEEEE-C---CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL-K---GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 300 PIasaSiGQVhrA~l-~---G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.||.|++|.||+|.. + +..+++|..+..... +....+.+|.
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~-----------------------------------~~~~~~~~E~ 46 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASV-----------------------------------QEQMKFLEEA 46 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCCh-----------------------------------HHHHHHHHHH
Confidence 589999999999987 2 467999976553110 0111234455
Q ss_pred HHHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhc----CCCHHH---HHHHHHHHHHHHHHh
Q 004334 376 ANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDEL----GVDRKR---LGRYAVESYLEQILS 446 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~----g~d~~~---la~~lv~~~L~qI~~ 446 (760)
..+.++ .+ ++ +++++. ...+..++||||++|++|.++...... ..+... ++..++ ..+..+|.
T Consensus 47 ~~l~~l----~h-~~--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~-~al~~lH~ 118 (269)
T cd05087 47 QPYRSL----QH-SN--LLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIA-LGLLHLHK 118 (269)
T ss_pred HHHHhC----CC-CC--EeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHH-HHHHHHHH
Confidence 555544 22 22 233332 234567999999999999887542211 112222 222223 34678899
Q ss_pred CCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-------CCCCCCCh
Q 004334 447 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-------VLVPTGDT 519 (760)
Q Consensus 447 ~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-------~~~~~~D~ 519 (760)
.|++|+|+||.||++++ ++.++|+|||++..........- .....+...++++++.... ..+...|+
T Consensus 119 ~~i~H~dlkp~nil~~~--~~~~kL~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Di 192 (269)
T cd05087 119 NNFIHSDLALRNCLLTA--DLTVKIGDYGLSHNKYKEDYYVT----PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNV 192 (269)
T ss_pred CCEeccccCcceEEEcC--CCcEEECCccccccccCcceeec----CCCcCCcccccCHhHhccccccccccCCCccchh
Confidence 99999999999999986 78999999998865433211000 0001123456677766421 13567899
Q ss_pred HHHHHHHHHHH
Q 004334 520 TAVRRTAQFFL 530 (760)
Q Consensus 520 ~al~~~~~~~l 530 (760)
+++...+.+++
T Consensus 193 wslG~~l~el~ 203 (269)
T cd05087 193 WSLGVTIWELF 203 (269)
T ss_pred HHHHHHHHHHH
Confidence 99987766654
No 268
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.32 E-value=1.3e-11 Score=131.12 Aligned_cols=185 Identities=19% Similarity=0.165 Sum_probs=116.4
Q ss_pred cccccccccEEEEEEEC------------------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccch
Q 004334 299 EPIAAASLGQVHRARLK------------------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDW 360 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~------------------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l 360 (760)
+.||.|++|.||+|... +..||||+.+......
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~----------------------------- 61 (296)
T cd05095 11 EKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKN----------------------------- 61 (296)
T ss_pred eeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHH-----------------------------
Confidence 57999999999998531 3468999876532111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcC----------CC
Q 004334 361 VAIYDECASVLYQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELG----------VD 428 (760)
Q Consensus 361 ~~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g----------~d 428 (760)
....+.+|+..+.++. + ++ +++++. ......+++|||++|++|.++....... .+
T Consensus 62 ------~~~~~~~E~~~l~~l~----~-~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 128 (296)
T cd05095 62 ------ARNDFLKEIKIMSRLK----D-PN--IIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTIS 128 (296)
T ss_pred ------HHHHHHHHHHHHHhCC----C-CC--cceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccC
Confidence 1122345555555442 2 22 223332 3345679999999999998875432111 11
Q ss_pred HHHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHH
Q 004334 429 RKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQA 506 (760)
Q Consensus 429 ~~~la~~l--v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~ 506 (760)
...+.... +...+..+|..|++|+|++|.||+++. ++.++|+|||++..+........ .+.......+++++
T Consensus 129 ~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~~~~pe 202 (296)
T cd05095 129 YSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGK--NYTIKIADFGMSRNLYSGDYYRI----QGRAVLPIRWMSWE 202 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcC--CCCEEeccCcccccccCCcceec----cCcCcCccccCCHH
Confidence 22222222 223478899999999999999999985 78999999999887643321100 00011123455666
Q ss_pred HHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 507 MVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 507 l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
....+..+...|++++.-.+.+++.
T Consensus 203 ~~~~~~~~~~~DiwSlG~~l~el~~ 227 (296)
T cd05095 203 SILLGKFTTASDVWAFGVTLWEILT 227 (296)
T ss_pred HHhcCCccchhhhhHHHHHHHHHHH
Confidence 6666777788999999988777664
No 269
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.32 E-value=2.8e-11 Score=125.39 Aligned_cols=182 Identities=16% Similarity=0.137 Sum_probs=117.8
Q ss_pred ccccccccEEEEEEE--C---CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--K---GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~---G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E 374 (760)
-||.|++|+||+|+. + +..||+|+.+..... .....+.+|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-----------------------------------~~~~~~~~e 46 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-----------------------------------AGKKEFLRE 46 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccch-----------------------------------HHHHHHHHH
Confidence 489999999999987 2 268999987653211 011123344
Q ss_pred HHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCcccc
Q 004334 375 AANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHA 452 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI~~~GffHa 452 (760)
...+..+ .+..-+.+...+ .....+++|||++|++|.++..... ..+...+...+.+ ..+..+|..|++|+
T Consensus 47 ~~~l~~l----~h~~iv~~~~~~--~~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i~H~ 119 (257)
T cd05060 47 ASVMAQL----DHPCIVRLIGVC--KGEPLMLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKHFVHR 119 (257)
T ss_pred HHHHHhc----CCCCeeeEEEEE--cCCceEEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCeecc
Confidence 4444443 222223333322 2456799999999999998764322 2343333333222 23677899999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHh--hcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIY--EKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~--~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|++|.||++++ ++.++|+|||++..+...... ..... .....+++++....+..+...|++++.-.+.+++
T Consensus 120 di~p~nili~~--~~~~kl~df~~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~ 192 (257)
T cd05060 120 DLAARNVLLVN--RHQAKISDFGMSRALGAGSDY-----YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAF 192 (257)
T ss_pred CcccceEEEcC--CCcEEeccccccceeecCCcc-----cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHH
Confidence 99999999986 789999999999877543321 01101 1123467778777777788899999987766554
No 270
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.32 E-value=1.9e-11 Score=126.71 Aligned_cols=188 Identities=14% Similarity=0.077 Sum_probs=113.8
Q ss_pred ccccccccEEEEEEE-C----CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL-K----GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (760)
Q Consensus 300 PIasaSiGQVhrA~l-~----G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E 374 (760)
.||.|++|+||+|.+ + +..||||......... ....+.+|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~-----------------------------------~~~~~~~e 46 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLE-----------------------------------EVEQFLKE 46 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHH-----------------------------------HHHHHHHH
Confidence 589999999999987 2 3579999753311000 00112334
Q ss_pred HHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCcccc
Q 004334 375 AANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHA 452 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHa 452 (760)
...+..+ .+..-+.+........+..+++|||+.|++|.++............+... .+-..+..+|..|++|+
T Consensus 47 ~~~l~~l----~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 122 (262)
T cd05058 47 GIIMKDF----SHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHR 122 (262)
T ss_pred HHHHccC----CCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 3333322 22222333333333345579999999999999876432222233333222 22334678899999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|++|.||++++ ++.++|+|||++..+.......... .........+++++....+..+...|++++...+.+++
T Consensus 123 dlk~~nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 196 (262)
T cd05058 123 DLAARNCMLDE--SFTVKVADFGLARDIYDKEYYSVHN--HTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 196 (262)
T ss_pred ccCcceEEEcC--CCcEEECCccccccccCCcceeecc--cccCcCCccccChhHhccCccchHHHHHHHHHHHHHHH
Confidence 99999999986 7899999999988664422110000 00111234566777766566667789999987766654
No 271
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.32 E-value=2.2e-11 Score=128.85 Aligned_cols=185 Identities=15% Similarity=0.091 Sum_probs=114.0
Q ss_pred cccccccccEEEEEEEC-------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~-------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
+.||.|++|.||+|..+ +..||||......... . ...+
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------~-----~~~~ 56 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR------------------------------E-----RIEF 56 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHH------------------------------H-----HHHH
Confidence 57999999999999752 4589999765321100 0 0012
Q ss_pred HHHHHHHHHHHHhcCCCCce-eeceeeeccCCCeEEEEeecCCCchhhhhhhhhc---------CCCHHHHHHHH--HHH
Q 004334 372 YQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL---------GVDRKRLGRYA--VES 439 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V-~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~---------g~d~~~la~~l--v~~ 439 (760)
.+|...+.++ +++++ .+...+ ......+++|||++|++|.++...... ......+...+ +..
T Consensus 57 ~~e~~~l~~l-----~~~~i~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 130 (288)
T cd05061 57 LNEASVMKGF-----TCHHVVRLLGVV-SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 130 (288)
T ss_pred HHHHHHHHhC-----CCCCeeeEEEEE-cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHH
Confidence 3344444443 12222 222222 334567999999999999987642111 11222222222 223
Q ss_pred HHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCh
Q 004334 440 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDT 519 (760)
Q Consensus 440 ~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~ 519 (760)
.+..+|..|++|+|+||.||++++ ++.++|+|||++..+.......- .........+++++...-+..++..|+
T Consensus 131 ~l~~lH~~~i~H~dikp~nili~~--~~~~~L~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv 204 (288)
T cd05061 131 GMAYLNAKKFVHRDLAARNCMVAH--DFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKDGVFTTSSDM 204 (288)
T ss_pred HHHHHHhCCCcCCCCChheEEEcC--CCcEEECcCCccccccccccccc----cCCCcccccccCHHHhccCCCChHhHH
Confidence 467899999999999999999985 78999999999876543221000 000011344667777766777778899
Q ss_pred HHHHHHHHHHH
Q 004334 520 TAVRRTAQFFL 530 (760)
Q Consensus 520 ~al~~~~~~~l 530 (760)
+++.-.+.+++
T Consensus 205 wslG~~l~el~ 215 (288)
T cd05061 205 WSFGVVLWEIT 215 (288)
T ss_pred HHHHHHHHHHH
Confidence 99987766554
No 272
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.32 E-value=1.9e-11 Score=125.30 Aligned_cols=159 Identities=17% Similarity=0.190 Sum_probs=106.2
Q ss_pred ccccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.+.+++++||+||.+...|++++.+...- +-+ |.... ....+.+|++.
T Consensus 7 ~~~l~~~~f~~v~~~~~~~~k~~~~~l~~--------~~~----------------------~~~~~--~~~l~~rE~~i 54 (218)
T PRK12274 7 NEPLKSDTFGRILLVRGGERKFVRRDLSA--------APW----------------------WLRGV--AWWLARREALA 54 (218)
T ss_pred ceeecCCCcceEEEeecCCceeeeccccc--------chh----------------------hhhhH--HHHHHHHHHHH
Confidence 35799999999998777788777663211 000 11100 11235678888
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCC-CC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADP-HP 456 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDp-HP 456 (760)
+.++.. ...+|+++.. ...+++|||++|.+|.+.... ....+... +...++++|..|++|+|+ ||
T Consensus 55 L~~L~~------~~~vP~ll~~--~~~~lvmeyI~G~~L~~~~~~-----~~~~~~~q-i~~~L~~lH~~GIvHrDL~kp 120 (218)
T PRK12274 55 LRQLDG------LPRTPRLLHW--DGRHLDRSYLAGAAMYQRPPR-----GDLAYFRA-ARRLLQQLHRCGVAHNDLAKE 120 (218)
T ss_pred HHhcCC------CCCCCEEEEE--cCEEEEEeeecCccHHhhhhh-----hhHHHHHH-HHHHHHHHHHCcCccCCCCCc
Confidence 887732 1457888742 567999999999998754211 11222222 334688899999999999 79
Q ss_pred CcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH
Q 004334 457 GNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ 509 (760)
Q Consensus 457 GNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~ 509 (760)
+||+++. +|.++|+|||++...++..+ .+.-+...|...+......
T Consensus 121 ~NILv~~--~g~i~LIDFG~A~~~~~~~~-----~~r~L~~rDl~~llk~~~~ 166 (218)
T PRK12274 121 ANWLVQE--DGSPAVIDFQLAVRGNPRAR-----WMRLLAREDLRHLLKHKRM 166 (218)
T ss_pred ceEEEcC--CCCEEEEECCCceecCCcch-----HHHHHHHHHHHHHHHHHHh
Confidence 9999985 78999999999997766443 1112234677778777655
No 273
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.32 E-value=3.4e-11 Score=127.37 Aligned_cols=184 Identities=20% Similarity=0.226 Sum_probs=119.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|.+ +++.||+|+..+.... +....+.+|.+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----------------------------------~~~~~~~~e~~ 51 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP-----------------------------------DLQKQILRELE 51 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCch-----------------------------------HHHHHHHHHHH
Confidence 6899999999999999 5899999987653111 11123445655
Q ss_pred HHHHHHHhcCCCCceeeceeeecc-CCCeEEEEeecCCCchhhhhhh-h--hcCCCHHHHHHHH--HHHHHHHHHhCCcc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSL-D--ELGVDRKRLGRYA--VESYLEQILSHGFF 450 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~-st~~vLVME~ieG~~L~d~~~l-~--~~g~d~~~la~~l--v~~~L~qI~~~Gff 450 (760)
.+.++ .+..-+.+...+... ....+|||||++|.+|.++... . ........+...+ +-..+..+|..|++
T Consensus 52 ~l~~l----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~ 127 (287)
T cd06621 52 INKSC----KSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKII 127 (287)
T ss_pred HHHhC----CCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 55544 222223333333222 2356999999999999886432 1 1112322222222 22336788999999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|+|++|.||+++. ++.++|+|||++..+...... ...++..+++++....+..+...|++++...+.+++
T Consensus 128 H~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~~--------~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~ 197 (287)
T cd06621 128 HRDIKPSNILLTR--KGQVKLCDFGVSGELVNSLAG--------TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVA 197 (287)
T ss_pred cCCCCHHHEEEec--CCeEEEeeccccccccccccc--------cccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHH
Confidence 9999999999986 788999999998766543221 112344556677666666677889999998777665
Q ss_pred H
Q 004334 531 N 531 (760)
Q Consensus 531 ~ 531 (760)
.
T Consensus 198 ~ 198 (287)
T cd06621 198 Q 198 (287)
T ss_pred h
Confidence 4
No 274
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.32 E-value=1.9e-11 Score=128.49 Aligned_cols=184 Identities=14% Similarity=0.133 Sum_probs=112.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|.. +|+.||+|+..+.... ...+..|..
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-------------------------------------~~~~~~e~~ 66 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI-------------------------------------DEEIEAEYN 66 (286)
T ss_pred eeeccCCCcEEEEEEECCCCceeEEEeeccccch-------------------------------------HHHHHHHHH
Confidence 6899999999999998 5899999986542100 011223444
Q ss_pred HHHHHHHhcCCCCceeeceeee----ccCCCeEEEEeecCCCchhhhhhh--h-hcCCCHHHHHHHH--HHHHHHHHHhC
Q 004334 377 NAELFASNFKDMDYVKVPTIFW----EYTTPQILTMEYVPGIKINRIQSL--D-ELGVDRKRLGRYA--VESYLEQILSH 447 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~----e~st~~vLVME~ieG~~L~d~~~l--~-~~g~d~~~la~~l--v~~~L~qI~~~ 447 (760)
.+.++. .+..-+.+...+. ......+++|||++|++|.++... . ....+...+...+ +-..+..+|..
T Consensus 67 ~l~~l~---~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 143 (286)
T cd06638 67 ILKALS---DHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN 143 (286)
T ss_pred HHHHHh---cCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC
Confidence 344332 1222222222222 122346999999999999886431 1 1122322222221 22346788999
Q ss_pred CccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCCCCCChHHH
Q 004334 448 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVLVPTGDTTAV 522 (760)
Q Consensus 448 GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-----G~~~~~~D~~al 522 (760)
|++|+|++|+||++++ ++.++|+|||++..+....... ....++..+++++.... +..+...|++++
T Consensus 144 ~i~H~dlkp~nili~~--~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl 215 (286)
T cd06638 144 KTIHRDVKGNNILLTT--EGGVKLVDFGVSAQLTSTRLRR------NTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSL 215 (286)
T ss_pred CccccCCCHHhEEECC--CCCEEEccCCceeecccCCCcc------ccccCCCcccChhhhchhhhccccccchhhhhhH
Confidence 9999999999999986 7889999999988775432110 11124455666665532 224567899998
Q ss_pred HHHHHHHH
Q 004334 523 RRTAQFFL 530 (760)
Q Consensus 523 ~~~~~~~l 530 (760)
.-.+.+++
T Consensus 216 Gvi~~el~ 223 (286)
T cd06638 216 GITAIELG 223 (286)
T ss_pred HHHHHHHh
Confidence 87665543
No 275
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.32 E-value=2.9e-11 Score=126.17 Aligned_cols=184 Identities=14% Similarity=0.077 Sum_probs=108.8
Q ss_pred ccccccccEEEEEEE-C---CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL-K---GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 300 PIasaSiGQVhrA~l-~---G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.||.|++|+||+|.. + ...|++|..+..... +....+.+|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~-----------------------------------~~~~~~~~e~ 46 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATP-----------------------------------DEQLLFLQEV 46 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCCh-----------------------------------HHHHHHHHHH
Confidence 489999999999986 3 457888865442111 1111233454
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcC----CCHHH---HHHHHHHHHHHHHHhCC
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELG----VDRKR---LGRYAVESYLEQILSHG 448 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g----~d~~~---la~~lv~~~L~qI~~~G 448 (760)
..+..+ .+..-+.+...+ ......+++|||++|++|.++....... .+... ++..+ -..+..+|..|
T Consensus 47 ~~~~~l----~h~nii~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi-~~~l~~lH~~~ 120 (269)
T cd05042 47 QPYREL----NHPNVLQCLGQC-IESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEV-ASGLLWLHQAD 120 (269)
T ss_pred HHHHhC----CCCCcceEEEEE-CCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHH-HHHHHHHHhcC
Confidence 444433 222222222222 2345679999999999999875432211 11222 22222 23467899999
Q ss_pred ccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-------CCCCCCCChHH
Q 004334 449 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-------GVLVPTGDTTA 521 (760)
Q Consensus 449 ffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-------G~~~~~~D~~a 521 (760)
++|+|+||.||+++. ++.++++|||++........... .........++++++... ...+...|+++
T Consensus 121 ivH~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diws 194 (269)
T cd05042 121 FIHSDLALRNCQLTA--DLSVKIGDYGLALEQYPEDYYIT----KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWS 194 (269)
T ss_pred EecccccHhheEecC--CCcEEEeccccccccccchheec----cCCCCCcccccCHHHHhhccccccccccchhhHHHH
Confidence 999999999999986 88999999998865433211000 000112234566666542 12355679999
Q ss_pred HHHHHHHHH
Q 004334 522 VRRTAQFFL 530 (760)
Q Consensus 522 l~~~~~~~l 530 (760)
+.-.+.+++
T Consensus 195 lG~~l~el~ 203 (269)
T cd05042 195 LGVTMWELF 203 (269)
T ss_pred HHHHHHHHH
Confidence 887766554
No 276
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.32 E-value=4e-11 Score=128.57 Aligned_cols=193 Identities=18% Similarity=0.193 Sum_probs=121.5
Q ss_pred hCCChhhhhcccCccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHH
Q 004334 285 LGAPLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVA 362 (760)
Q Consensus 285 lG~~~~~iF~~fd~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~ 362 (760)
+...++..|.. ...+|.|++|+||+|+. +|+.|+||.....-...
T Consensus 9 ~~~~~~~~~~~--~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~------------------------------- 55 (308)
T cd06634 9 FKDDPEKLFSD--LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS------------------------------- 55 (308)
T ss_pred hcCCcHHHHHH--HHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccC-------------------------------
Confidence 34445555553 35799999999999998 58999999765421000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHH
Q 004334 363 IYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESY 440 (760)
Q Consensus 363 i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~ 440 (760)
.+....+.+|...+..+ .+...+.+...+ ......++||||+.| ++.++.......++...+...+. -..
T Consensus 56 --~~~~~~~~~e~~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l~~~ 127 (308)
T cd06634 56 --NEKWQDIIKEVRFLQKL----RHPNTIQYRGCY-LREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQG 127 (308)
T ss_pred --hHHHHHHHHHHHHHHhC----CCCCcccEEEEE-EcCCeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 00111233455545444 222223333322 234567999999986 56655433333344444443322 234
Q ss_pred HHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cCCCCCCC
Q 004334 441 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MGVLVPTG 517 (760)
Q Consensus 441 L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~---lG~~~~~~ 517 (760)
+..+|..|++|+|++|.||+++. ++.+++.|||++..+.+... ..++..+++++... .+..+...
T Consensus 128 l~~LH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~~~~ 195 (308)
T cd06634 128 LAYLHSHNMIHRDVKAGNILLSE--PGLVKLGDFGSASIMAPANX----------FVGTPYWMAPEVILAMDEGQYDGKV 195 (308)
T ss_pred HHHHHhCCcccCCCCHHhEEECC--CCcEEECCcccceeecCccc----------ccCCccccCHHHHhhcccCCCCccc
Confidence 68889999999999999999985 78999999999887665321 12344566666653 24456678
Q ss_pred ChHHHHHHHHHHH
Q 004334 518 DTTAVRRTAQFFL 530 (760)
Q Consensus 518 D~~al~~~~~~~l 530 (760)
|+++++..+.+++
T Consensus 196 Di~slG~il~el~ 208 (308)
T cd06634 196 DVWSLGITCIELA 208 (308)
T ss_pred chHHHHHHHHHHH
Confidence 9999987766554
No 277
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.32 E-value=2e-11 Score=129.04 Aligned_cols=188 Identities=16% Similarity=0.162 Sum_probs=116.6
Q ss_pred cccccccccEEEEEEE-----CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-----~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~ 373 (760)
+.||.|++|.||.|+. +|+.||+|+.+...... .....+.+.+
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~--------------------------------~~~~~~~~~~ 53 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQ--------------------------------KAKTTEHTRT 53 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhh--------------------------------cchHHHHHHH
Confidence 4689999999999987 58999999865421100 0011122334
Q ss_pred HHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccc
Q 004334 374 EAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFH 451 (760)
Q Consensus 374 EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffH 451 (760)
|.+.+.++. +++.+.-.....+.....+++|||++|++|.+..... .......+...+ +...+..+|..|++|
T Consensus 54 e~~~l~~l~----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~i~H 128 (290)
T cd05613 54 ERQVLEHIR----QSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLGIIY 128 (290)
T ss_pred HHHHHHhcc----cCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 555555442 2232221111222334568999999999998865322 223444443332 334478899999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC--CCCCCCChHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG--VLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG--~~~~~~D~~al~~~~~~~ 529 (760)
+|++|.||+++. +++++|+|||++..+......... ...+...+++++...-+ ......|++++...+.++
T Consensus 129 ~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~l 201 (290)
T cd05613 129 RDIKLENILLDS--NGHVVLTDFGLSKEFHEDEVERAY-----SFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYEL 201 (290)
T ss_pred cCCCHHHeEECC--CCCEEEeeCccceecccccccccc-----cccCCcccCChhhccCCCCCCCccccHHHHHHHHHHH
Confidence 999999999985 789999999999877543211110 11234445666655432 245678999998776655
Q ss_pred H
Q 004334 530 L 530 (760)
Q Consensus 530 l 530 (760)
+
T Consensus 202 l 202 (290)
T cd05613 202 L 202 (290)
T ss_pred h
Confidence 4
No 278
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.32 E-value=2.3e-11 Score=128.23 Aligned_cols=123 Identities=14% Similarity=0.142 Sum_probs=86.3
Q ss_pred CCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceec
Q 004334 402 TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS 479 (760)
Q Consensus 402 t~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~ 479 (760)
...+++|||++|++|.++........+...+.... +-..+..+|..|++|+|++|.||++++ ++.++|+|||++..
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~--~~~~kl~Dfg~~~~ 158 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKS--DSIVQIADFGVADL 158 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC--CCcEEEcCCcccee
Confidence 45689999999999998765433334444333322 223477899999999999999999985 78999999999987
Q ss_pred cChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 480 ISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 480 l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+.+...... .....+...+++++....+..+...|++++.-.+.+++
T Consensus 159 ~~~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~ 205 (279)
T cd05111 159 LYPDDKKYF----YSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMM 205 (279)
T ss_pred ccCCCcccc----cCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHH
Confidence 754432211 11112334566777777777788899999987776654
No 279
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.32 E-value=1.4e-11 Score=139.72 Aligned_cols=181 Identities=16% Similarity=0.143 Sum_probs=110.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||....... . ..+|..
T Consensus 72 ~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~-~---------------------------------------~~~Ei~ 111 (440)
T PTZ00036 72 NIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ-Y---------------------------------------KNRELL 111 (440)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc-h---------------------------------------HHHHHH
Confidence 5799999999999998 589999997643210 0 012333
Q ss_pred HHHHHHHhcCCCCceeeceeeecc-----CC--CeEEEEeecCCCchhhhhh-h--hhcCCCHHHHHHH--HHHHHHHHH
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEY-----TT--PQILTMEYVPGIKINRIQS-L--DELGVDRKRLGRY--AVESYLEQI 444 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~-----st--~~vLVME~ieG~~L~d~~~-l--~~~g~d~~~la~~--lv~~~L~qI 444 (760)
.+..+ .+..-+.+...|... .. -.++||||++|. +.++.. . ....+....+... .+-..+..+
T Consensus 112 il~~l----~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yL 186 (440)
T PTZ00036 112 IMKNL----NHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQT-VHKYMKHYARNNHALPLFLVKLYSYQLCRALAYI 186 (440)
T ss_pred HHHhc----CCCCCcceeeeEeecccccCCCceEEEEEEecCCcc-HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 33333 222223333332211 11 246899999974 444322 1 1122332222221 223347889
Q ss_pred HhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHH
Q 004334 445 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVR 523 (760)
Q Consensus 445 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~ 523 (760)
|..|++|+|+||.||+++. .++.++|+|||++..+....... -..+++.++++++..- ...+...|+++++
T Consensus 187 H~~~IiHrDLKp~NILl~~-~~~~vkL~DFGla~~~~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG 258 (440)
T PTZ00036 187 HSKFICHRDLKPQNLLIDP-NTHTLKLCDFGSAKNLLAGQRSV-------SYICSRFYRAPELMLGATNYTTHIDLWSLG 258 (440)
T ss_pred HHCCEecCCcCHHHEEEcC-CCCceeeeccccchhccCCCCcc-------cCCCCcCccCHHHhcCCCCCCcHHHHHHHH
Confidence 9999999999999999985 34579999999998775432210 0123556778887643 2356678999999
Q ss_pred HHHHHHHHH
Q 004334 524 RTAQFFLNS 532 (760)
Q Consensus 524 ~~~~~~l~~ 532 (760)
-.+.+++..
T Consensus 259 vil~elltG 267 (440)
T PTZ00036 259 CIIAEMILG 267 (440)
T ss_pred HHHHHHHhC
Confidence 887776643
No 280
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.31 E-value=2.6e-11 Score=129.72 Aligned_cols=182 Identities=19% Similarity=0.189 Sum_probs=114.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|.|++|.||+|+. +|+.||+|+........ .+....+.+|..
T Consensus 21 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~---------------------------------~~~~~~~~~Ei~ 67 (307)
T cd06607 21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS---------------------------------NEKWQDIIKEVR 67 (307)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCc---------------------------------HHHHHHHHHHHH
Confidence 5699999999999998 58999999864321100 011122344544
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+..+ .+..-+.+..++. .....++||||++|. +.++........+...+...+ +-..+..+|..|++|+|+
T Consensus 68 ~l~~l----~h~niv~~~~~~~-~~~~~~lv~e~~~g~-l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl 141 (307)
T cd06607 68 FLQQL----RHPNTIEYKGCYL-REHTAWLVMEYCLGS-ASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDI 141 (307)
T ss_pred HHHhC----CCCCEEEEEEEEE-eCCeEEEEHHhhCCC-HHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCC
Confidence 44443 2333334443332 345679999999874 444332222233444333222 234478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~---lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+|+||++++ ++.++|.|||++...++... ..+.+.+++++... .+..++..|+++++..+.+++.
T Consensus 142 ~p~nIl~~~--~~~~kL~dfg~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~t 209 (307)
T cd06607 142 KAGNILLTE--PGTVKLADFGSASLVSPANS----------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 209 (307)
T ss_pred CcccEEECC--CCCEEEeecCcceecCCCCC----------ccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHc
Confidence 999999986 78999999999887654321 12344556666542 2445667899999877766543
No 281
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.31 E-value=2.9e-11 Score=135.85 Aligned_cols=85 Identities=14% Similarity=0.066 Sum_probs=60.2
Q ss_pred HHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCh
Q 004334 440 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDT 519 (760)
Q Consensus 440 ~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~ 519 (760)
.+..+|..|++|+|++|.||++++ ++.++|+|||++..+........ .........+++++....+...+..|+
T Consensus 251 aL~~LH~~~ivHrdlkp~NiLl~~--~~~~kL~DfGla~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Dv 324 (401)
T cd05107 251 GMEFLASKNCVHRDLAARNVLICE--GKLVKICDFGLARDIMRDSNYIS----KGSTFLPLKWMAPESIFNNLYTTLSDV 324 (401)
T ss_pred HHHHHhcCCcCcccCCcceEEEeC--CCEEEEEecCcceeccccccccc----CCCcCCCCceeChHHhcCCCCCcHhHH
Confidence 467899999999999999999985 78999999999986543211000 000112345667777776767778899
Q ss_pred HHHHHHHHHHH
Q 004334 520 TAVRRTAQFFL 530 (760)
Q Consensus 520 ~al~~~~~~~l 530 (760)
+++...+.+++
T Consensus 325 wslGvil~e~l 335 (401)
T cd05107 325 WSFGILLWEIF 335 (401)
T ss_pred HHHHHHHHHHH
Confidence 99987766554
No 282
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.31 E-value=1.2e-11 Score=132.13 Aligned_cols=190 Identities=14% Similarity=0.123 Sum_probs=114.0
Q ss_pred cCccccccccccEEEEEEE----CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 296 FDVEPIAAASLGQVHRARL----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 296 fd~~PIasaSiGQVhrA~l----~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
++...||.|++|.||+|+. ++..||+|..++.-. ...+
T Consensus 4 ~~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--------------------------------------~~~~ 45 (317)
T cd07867 4 YEGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--------------------------------------SMSA 45 (317)
T ss_pred eeceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--------------------------------------cHHH
Confidence 3446799999999999997 257899997654210 0012
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeeecc-CCCeEEEEeecCCCchhhhhhhhh--------cCCCHHHHHHHH--HHHH
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDE--------LGVDRKRLGRYA--VESY 440 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~e~-st~~vLVME~ieG~~L~d~~~l~~--------~g~d~~~la~~l--v~~~ 440 (760)
.+|+..+.++ .+..-+.+..++... ....+++|||++| .+.++..... ..+....+...+ +-..
T Consensus 46 ~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a 120 (317)
T cd07867 46 CREIALLREL----KHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDG 120 (317)
T ss_pred HHHHHHHHhC----CCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHH
Confidence 3454444444 233334444444322 3446899999987 4444332110 112222222221 2234
Q ss_pred HHHHHhCCccccCCCCCcEEEec--cCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCC
Q 004334 441 LEQILSHGFFHADPHPGNIAVDD--VNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTG 517 (760)
Q Consensus 441 L~qI~~~GffHaDpHPGNILV~~--~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~ 517 (760)
+..+|..|++|+|+||.||++.. ..++.++|+|||++..+....... .. ..-..++..+++++...- ...+...
T Consensus 121 L~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~-~~--~~~~~~t~~y~aPE~~~~~~~~~~~~ 197 (317)
T cd07867 121 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL-AD--LDPVVVTFWYRAPELLLGARHYTKAI 197 (317)
T ss_pred HHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccc-cc--cCcceecccccCcHHhcCCCccCcHH
Confidence 77899999999999999999942 135789999999998775432210 00 001123455677776643 3356678
Q ss_pred ChHHHHHHHHHHHH
Q 004334 518 DTTAVRRTAQFFLN 531 (760)
Q Consensus 518 D~~al~~~~~~~l~ 531 (760)
|++++...+.+++.
T Consensus 198 DiwSlG~il~el~t 211 (317)
T cd07867 198 DIWAIGCIFAELLT 211 (317)
T ss_pred HHHhHHHHHHHHHh
Confidence 99999988776654
No 283
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.31 E-value=2.6e-11 Score=128.18 Aligned_cols=187 Identities=20% Similarity=0.196 Sum_probs=119.5
Q ss_pred cccccccccEEEEEEEC--C----------------eeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccch
Q 004334 299 EPIAAASLGQVHRARLK--G----------------EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDW 360 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~--G----------------~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l 360 (760)
+.||.|++|.||+|+.. + ..||+|+.+.+...
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~------------------------------ 60 (296)
T cd05051 11 EKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD------------------------------ 60 (296)
T ss_pred ccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH------------------------------
Confidence 57999999999999872 1 45899987654221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh----------cCCCHH
Q 004334 361 VAIYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE----------LGVDRK 430 (760)
Q Consensus 361 ~~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~----------~g~d~~ 430 (760)
+....+.+|++.+.++. +..-+.+...+ ......+++|||++|.+|.++..... ...+..
T Consensus 61 -----~~~~~~~~e~~~l~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 130 (296)
T cd05051 61 -----NAREDFLKEVKILSRLS----DPNIARLLGVC-TVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFS 130 (296)
T ss_pred -----HHHHHHHHHHHHHHhcC----CCCEeEEEEEE-ecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHH
Confidence 11122344555555442 22223333222 23356799999999999988653221 023333
Q ss_pred HHHHHHH--HHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH
Q 004334 431 RLGRYAV--ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV 508 (760)
Q Consensus 431 ~la~~lv--~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~ 508 (760)
.+...+. -..+..+|..|++|+|++|.||+++. ++.++|+|||++..+........ .........+++++..
T Consensus 131 ~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~ 204 (296)
T cd05051 131 TLLYMATQIASGMRYLESLNFVHRDLATRNCLVGK--NYTIKIADFGMSRNLYSSDYYRV----QGRAPLPIRWMAWESV 204 (296)
T ss_pred HHHHHHHHHHHHHHHHHHcCccccccchhceeecC--CCceEEccccceeecccCcceee----cCcCCCCceecCHHHh
Confidence 3333322 23367889999999999999999986 78999999999876643321110 0111223457778877
Q ss_pred HcCCCCCCCChHHHHHHHHHHHH
Q 004334 509 QMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 509 ~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
..+..++..|++++.-.+.+++.
T Consensus 205 ~~~~~~~~~Dv~slG~~l~el~~ 227 (296)
T cd05051 205 LLGKFTTKSDVWAFGVTLWEILT 227 (296)
T ss_pred hcCCCCccchhhhhHHHHHHHHh
Confidence 77777888999999877766543
No 284
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.31 E-value=1.3e-11 Score=130.79 Aligned_cols=188 Identities=16% Similarity=0.133 Sum_probs=117.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|.. +|+.|+||..+...... ..++....+.+|..
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~-------------------------------~~~~~~~~~~~e~~ 54 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKE-------------------------------AKDGINFTALREIK 54 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEecccccc-------------------------------ccchhhHHHHHHHH
Confidence 4699999999999998 58999999876632110 00111223344555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+.++. +..-+.+...+.+ ....++||||+ +++|.++.......++...+...+ +-..+..+|.+|++|+|+
T Consensus 55 ~l~~~~----h~~i~~~~~~~~~-~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl 128 (298)
T cd07841 55 LLQELK----HPNIIGLLDVFGH-KSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDL 128 (298)
T ss_pred HHhhcC----CCCChhhhheeec-CCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCC
Confidence 555442 2222333333322 45679999999 888888754322124444333322 223477899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~l~ 531 (760)
+|.||+++. ++.++|+|||++..+.......- ....+..+++++.... ...+...|+++++-.+.+++.
T Consensus 129 ~p~nill~~--~~~~~l~dfg~~~~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~ 198 (298)
T cd07841 129 KPNNLLIAS--DGVLKLADFGLARSFGSPNRKMT------HQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLL 198 (298)
T ss_pred ChhhEEEcC--CCCEEEccceeeeeccCCCcccc------ccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHc
Confidence 999999986 88999999999987754321100 0012334555665532 334566899999877766654
No 285
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.31 E-value=7.5e-12 Score=131.43 Aligned_cols=185 Identities=17% Similarity=0.160 Sum_probs=112.0
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|.|++|.||+|+. +|+.||+|+.+...... +....+.+|..
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~----------------------------------~~~~~~~~ei~ 51 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE----------------------------------GVPSSALREIC 51 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccc----------------------------------cCccchhHHHH
Confidence 5699999999999999 69999999865421110 00011223444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+.++. +...+.+...+ ......+++|||++| ++.+.........+...+.... +-..+..+|..|++|+|+
T Consensus 52 ~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl 125 (284)
T cd07839 52 LLKELK----HKNIVRLYDVL-HSDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDL 125 (284)
T ss_pred HHHhcC----CCCeeeHHHHh-ccCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCC
Confidence 444331 11112211222 234567999999987 5555432222234444433332 223478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~~~~~~l~ 531 (760)
||+||+++. ++.++|+|||++..+....+.. ....++..++++++...+ ..++..|+++++-.+.+++.
T Consensus 126 ~~~nil~~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~t 195 (284)
T cd07839 126 KPQNLLINK--NGELKLADFGLARAFGIPVRCY------SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN 195 (284)
T ss_pred CHHHEEEcC--CCcEEECccchhhccCCCCCCc------CCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHh
Confidence 999999985 7899999999987664332110 001123445666665432 34667899999877776653
No 286
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.31 E-value=4e-11 Score=125.99 Aligned_cols=172 Identities=16% Similarity=0.159 Sum_probs=115.1
Q ss_pred cccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 301 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 301 IasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
+|.|++|+||+++. +|+.+|+|+..+..... .|. . .
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---------------------------------~e~--------~-~ 61 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---------------------------------IEP--------M-V 61 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---------------------------------hhH--------H-H
Confidence 69999999999998 58999999865521000 000 0 0
Q ss_pred HHHHHhcCCCCc-eeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCCC
Q 004334 379 ELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPH 455 (760)
Q Consensus 379 ~~f~~~~~~~~~-V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI~~~GffHaDpH 455 (760)
..+ ..++++ +.+...+. .....++||||++|++|.++..... .++...+...+.+ ..+..+|..|++|+|++
T Consensus 62 ~~~---~~~h~~iv~~~~~~~-~~~~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~ 136 (267)
T PHA03390 62 HQL---MKDNPNFIKLYYSVT-TLKGHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIK 136 (267)
T ss_pred HHH---hhcCCCEEEEEEEEe-cCCeeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence 000 112222 33333332 2346799999999999988764332 3444444333322 33688999999999999
Q ss_pred CCcEEEeccCCC-cEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 456 PGNIAVDDVNGG-RLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 456 PGNILV~~~~~g-~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
|.||+++. ++ +++++|||++..++.... ..+...+++++....+..++..|++++...+.+++.
T Consensus 137 p~nil~~~--~~~~~~l~dfg~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~ 201 (267)
T PHA03390 137 LENVLYDR--AKDRIYLCDYGLCKIIGTPSC----------YDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLT 201 (267)
T ss_pred HHHEEEeC--CCCeEEEecCccceecCCCcc----------CCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHH
Confidence 99999986 55 899999999987765421 234566777887776666778899999877766654
No 287
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.31 E-value=1.9e-11 Score=126.40 Aligned_cols=186 Identities=19% Similarity=0.185 Sum_probs=118.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
++||.|++|.||+|.. +|+.|+||+.+..... .+....+.+|..
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------------------------~~~~~~~~~e~~ 51 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND----------------------------------PKTIKEIADEMK 51 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccc----------------------------------hHHHHHHHHHHH
Confidence 6899999999999998 6899999997653211 011122344444
Q ss_pred HHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHH---HHHHHHHHHHHHHhCCccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRL---GRYAVESYLEQILSHGFFH 451 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~l---a~~lv~~~L~qI~~~GffH 451 (760)
.+.++. +++ +.+++. ......++||||++|.+|.++..... ..+...+ +..++ ..+..+|..|++|
T Consensus 52 ~~~~l~-----~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~-~~l~~lh~~~i~H 122 (264)
T cd06626 52 VLELLK-----HPN--LVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGR-ILDEHVIRVYTLQLL-EGLAYLHSHGIVH 122 (264)
T ss_pred HHHhCC-----CCC--hhheeeeEecCCEEEEEEecCCCCcHHHHHhhcC-CCChHHHHHHHHHHH-HHHHHHHHCCccc
Confidence 444442 222 222222 23456799999999999998764321 1222222 22223 3367889999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC---CCCCCChHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV---LVPTGDTTAVRRTAQF 528 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~---~~~~~D~~al~~~~~~ 528 (760)
+|++|+||++++ ++.++|+|||.+..+....... ...+. ...+...++.++....+. .....|++++...+.+
T Consensus 123 ~dl~~~nil~~~--~~~~kl~d~g~~~~~~~~~~~~-~~~~~-~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~ 198 (264)
T cd06626 123 RDIKPANIFLDH--NGVIKLGDFGCAVKLKNNTTTM-GEEVQ-SLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLE 198 (264)
T ss_pred CCCCHHHEEECC--CCCEEEcccccccccCCCCCcc-ccccc-CCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHH
Confidence 999999999986 7899999999998876543211 00000 122345566667665444 5667899999877766
Q ss_pred HHH
Q 004334 529 FLN 531 (760)
Q Consensus 529 ~l~ 531 (760)
++.
T Consensus 199 l~~ 201 (264)
T cd06626 199 MAT 201 (264)
T ss_pred HHh
Confidence 553
No 288
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.30 E-value=2.7e-11 Score=124.70 Aligned_cols=187 Identities=16% Similarity=0.123 Sum_probs=118.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|+|++|.||+|.. +|+.||+|+........ +-...+.+|..
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~----------------------------------~~~~~~~~e~~ 51 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTE----------------------------------KEKQQLVSEVN 51 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCH----------------------------------HHHHHHHHHHH
Confidence 5799999999999998 68999999865421110 00112334444
Q ss_pred HHHHHHHhcCCCCceeeceeee-ccCCCeEEEEeecCCCchhhhhhhh---hcCCCHHHHHHHH--HHHHHHHHH-----
Q 004334 377 NAELFASNFKDMDYVKVPTIFW-EYTTPQILTMEYVPGIKINRIQSLD---ELGVDRKRLGRYA--VESYLEQIL----- 445 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~-e~st~~vLVME~ieG~~L~d~~~l~---~~g~d~~~la~~l--v~~~L~qI~----- 445 (760)
.+.++. +..-+.+...+. ......+++|||++|.+|.++.... ...++...+.... +...+..+|
T Consensus 52 ~l~~l~----~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~ 127 (265)
T cd08217 52 ILRELK----HPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDP 127 (265)
T ss_pred HHHhcC----CCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccc
Confidence 444442 211122222221 1223458999999999998875422 1223333333322 223367788
Q ss_pred hCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHH
Q 004334 446 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 525 (760)
Q Consensus 446 ~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~ 525 (760)
..|++|+|+||+||+++. ++.++++|||++..+...... . .-..+...+++++....+..+...|++++...
T Consensus 128 ~~~i~h~dl~p~nili~~--~~~~kl~d~g~~~~~~~~~~~--~----~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~i 199 (265)
T cd08217 128 GNTVLHRDLKPANIFLDA--NNNVKLGDFGLAKILGHDSSF--A----KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCL 199 (265)
T ss_pred cCcceecCCCHHHEEEec--CCCEEEecccccccccCCccc--c----cccccCCCccChhhhcCCCCCchhHHHHHHHH
Confidence 889999999999999985 789999999999887654310 0 00124555677777766666777899999877
Q ss_pred HHHHHH
Q 004334 526 AQFFLN 531 (760)
Q Consensus 526 ~~~~l~ 531 (760)
+.+++.
T Consensus 200 l~~l~~ 205 (265)
T cd08217 200 IYELCA 205 (265)
T ss_pred HHHHHH
Confidence 766553
No 289
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.30 E-value=1.8e-11 Score=127.42 Aligned_cols=185 Identities=18% Similarity=0.092 Sum_probs=116.2
Q ss_pred ccccccccEEEEEEEC--------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARLK--------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 300 PIasaSiGQVhrA~l~--------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
.||.|++|.||+|+.. ++.|+||....+... +....+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~-----------------------------------~~~~~~ 46 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATD-----------------------------------QEKKEF 46 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccch-----------------------------------hhHHHH
Confidence 6899999999999872 267999975442110 001123
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh------cCCCHHHHHHHH--HHHHHHH
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE------LGVDRKRLGRYA--VESYLEQ 443 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~------~g~d~~~la~~l--v~~~L~q 443 (760)
.+|+..+..+ +++++.-..-+.......+++|||++|++|.++..... ...+...+.... +-..+..
T Consensus 47 ~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 121 (269)
T cd05044 47 LKEAHLMSNF-----NHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVY 121 (269)
T ss_pred HHHHHHHHhc-----CCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHH
Confidence 3455555444 22333222222233456799999999999988653211 112333333222 2233678
Q ss_pred HHhCCccccCCCCCcEEEeccCCC-----cEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004334 444 ILSHGFFHADPHPGNIAVDDVNGG-----RLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 518 (760)
Q Consensus 444 I~~~GffHaDpHPGNILV~~~~~g-----~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D 518 (760)
+|..|++|+|++|.||++++ ++ .++++|||++..+........ .+.......+++++...-+..++..|
T Consensus 122 lH~~~i~H~dl~p~nil~~~--~~~~~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~D 195 (269)
T cd05044 122 LEQMHFIHRDLAARNCLVSE--KGYDADRVVKIGDFGLARDIYKSDYYRK----EGEGLLPVRWMAPESLLDGKFTTQSD 195 (269)
T ss_pred HHhCCcccCCCChheEEEec--CCCCCCcceEECCccccccccccccccc----CcccCCCccccCHHHHccCCcccchh
Confidence 99999999999999999985 44 799999999987643321000 01111234567788777788888899
Q ss_pred hHHHHHHHHHHH
Q 004334 519 TTAVRRTAQFFL 530 (760)
Q Consensus 519 ~~al~~~~~~~l 530 (760)
++++.-.+.+++
T Consensus 196 v~slG~il~ell 207 (269)
T cd05044 196 VWSFGVLMWEIL 207 (269)
T ss_pred HHHHHHHHHHHH
Confidence 999988777665
No 290
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.30 E-value=2.2e-11 Score=130.27 Aligned_cols=188 Identities=15% Similarity=0.113 Sum_probs=116.7
Q ss_pred ccccccccccEEEEEEEC---------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARLK---------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECA 368 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l~---------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~ 368 (760)
.++||.|++|.||+|+.. +..||+|+.++..... + .
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~----------------------------------~-~ 67 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEK----------------------------------D-L 67 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChH----------------------------------H-H
Confidence 368999999999999862 2469999887642111 0 0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh---------------cCCCHHHHH
Q 004334 369 SVLYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRKRLG 433 (760)
Q Consensus 369 ~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~---------------~g~d~~~la 433 (760)
..+.+|...+.++. .+..-+.+...+ ......+++|||++|++|.++..... ...+...+.
T Consensus 68 ~~~~~e~~~l~~l~---~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 143 (307)
T cd05098 68 SDLISEMEMMKMIG---KHKNIINLLGAC-TQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLV 143 (307)
T ss_pred HHHHHHHHHHHHhc---CCCCEeeEEEEE-ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHH
Confidence 11233444444331 122223333333 33456799999999999998764321 112333333
Q ss_pred HHHH--HHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC
Q 004334 434 RYAV--ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG 511 (760)
Q Consensus 434 ~~lv--~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG 511 (760)
.... -..+..+|..|++|+|+||.||++++ ++.++|+|||.+..+........ . ........+++++....+
T Consensus 144 ~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~--~~~~kL~dfg~a~~~~~~~~~~~--~--~~~~~~~~y~aPE~~~~~ 217 (307)
T cd05098 144 SCAYQVARGMEYLASKKCIHRDLAARNVLVTE--DNVMKIADFGLARDIHHIDYYKK--T--TNGRLPVKWMAPEALFDR 217 (307)
T ss_pred HHHHHHHHHHHHHHHCCcccccccHHheEEcC--CCcEEECCCcccccccccchhhc--c--ccCCCccceeChHHhccC
Confidence 3222 23478899999999999999999985 78999999999876643211100 0 000112346677776666
Q ss_pred CCCCCCChHHHHHHHHHHH
Q 004334 512 VLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 512 ~~~~~~D~~al~~~~~~~l 530 (760)
..+...|++++.-.+.+++
T Consensus 218 ~~~~~~DvwslG~~l~el~ 236 (307)
T cd05098 218 IYTHQSDVWSFGVLLWEIF 236 (307)
T ss_pred CCCcHHHHHHHHHHHHHHH
Confidence 6677889999987766554
No 291
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.30 E-value=3.1e-11 Score=125.70 Aligned_cols=190 Identities=16% Similarity=0.063 Sum_probs=118.0
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|.. +|+.|+||+.+...... .. .+....+.+|+.
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~---------------------------~~----~~~~~~~~~E~~ 56 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESP---------------------------ET----SKEVNALECEIQ 56 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCc---------------------------cc----HHHHHHHHHHHH
Confidence 5799999999999998 58999999865421110 00 011123456666
Q ss_pred HHHHHHHhcCCCCceeeceeeecc-CCCeEEEEeecCCCchhhhhhhhhcCCCHHH---HHHHHHHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~-st~~vLVME~ieG~~L~d~~~l~~~g~d~~~---la~~lv~~~L~qI~~~GffHa 452 (760)
.+.++. +..-+.+...+.+. ....+++|||++|++|.++.... ...+... ++..+ ...+..+|..|++|+
T Consensus 57 ~l~~l~----h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l-~~~l~~lH~~~i~H~ 130 (265)
T cd06652 57 LLKNLL----HERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQI-LEGVSYLHSNMIVHR 130 (265)
T ss_pred HHHhcC----CCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHH-HHHHHHHHhCCEecC
Confidence 666652 22112222222111 23457999999999998865322 1123222 22222 234678899999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|++|.||++++ ++.++|+|||+...+....... .. .....+...+++++.......++..|++++...+.+++
T Consensus 131 dl~p~nil~~~--~~~~~l~Dfg~~~~~~~~~~~~-~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 203 (265)
T cd06652 131 DIKGANILRDS--VGNVKLGDFGASKRLQTICLSG-TG--MKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEML 203 (265)
T ss_pred CCCHHHEEecC--CCCEEECcCccccccccccccc-cc--cccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHh
Confidence 99999999985 8899999999987664321100 00 00012344566777766555677889999987776654
No 292
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.30 E-value=2.7e-11 Score=129.72 Aligned_cols=188 Identities=15% Similarity=0.102 Sum_probs=121.1
Q ss_pred ccccccccccEEEEEEE-------CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL-------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 370 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l-------~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~ 370 (760)
.+.||.|++|+||+|+. .+..||||+.+...... ....
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-----------------------------------~~~~ 84 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSS-----------------------------------EREA 84 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChH-----------------------------------HHHH
Confidence 36899999999999975 24689999876532111 1123
Q ss_pred HHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhc-CCCHHHHHHHH--HHHHHHHHHhC
Q 004334 371 LYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL-GVDRKRLGRYA--VESYLEQILSH 447 (760)
Q Consensus 371 l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~-g~d~~~la~~l--v~~~L~qI~~~ 447 (760)
+.+|...+.++. .+..-+.+...+ ......+++|||+.|++|.++...... ..+...+.... +...+..+|..
T Consensus 85 ~~~E~~~l~~l~---~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~ 160 (302)
T cd05055 85 LMSELKIMSHLG---NHENIVNLLGAC-TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK 160 (302)
T ss_pred HHHHHHHHHhcc---CCCCcceEEEEE-ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 445555555542 122222333322 334567999999999999887643221 13444333322 22346889999
Q ss_pred CccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004334 448 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 527 (760)
Q Consensus 448 GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~ 527 (760)
|++|+|++|.||++++ ++.++++|||++..+........ .+.......+++++....+..++..|++++.-.+.
T Consensus 161 ~ivH~dlkp~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~ 234 (302)
T cd05055 161 NCIHRDLAARNVLLTH--GKIVKICDFGLARDIMNDSNYVV----KGNARLPVKWMAPESIFNCVYTFESDVWSYGILLW 234 (302)
T ss_pred CeehhhhccceEEEcC--CCeEEECCCcccccccCCCceee----cCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHH
Confidence 9999999999999985 78899999999887654321100 01112234567788777777777889999987766
Q ss_pred HHH
Q 004334 528 FFL 530 (760)
Q Consensus 528 ~~l 530 (760)
+++
T Consensus 235 el~ 237 (302)
T cd05055 235 EIF 237 (302)
T ss_pred HHH
Confidence 554
No 293
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.30 E-value=2.3e-11 Score=129.53 Aligned_cols=182 Identities=18% Similarity=0.162 Sum_probs=117.0
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|+|++|.||++.. +|+.|++|+....-.. ....+.+|..
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~------------------------------------~~~~~~~e~~ 68 (293)
T cd06647 25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQP------------------------------------KKELIINEIL 68 (293)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeccccch------------------------------------HHHHHHHHHH
Confidence 6899999999999987 6889999975321000 0012233443
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+.++ . ++++.-..-+.......++||||++|++|.++.... ..+...+...+ +-..+..+|..|++|+|+
T Consensus 69 ~l~~l----~-hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL 141 (293)
T cd06647 69 VMREN----K-HPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDI 141 (293)
T ss_pred HHhhc----C-CCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCEeeccC
Confidence 33332 2 232221111222345689999999999998875322 23333322222 223467889999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+|.||+++. ++.++|+|||+...+.+..... ....+...++++++...+..++..|++++...+.+++.
T Consensus 142 ~p~Nili~~--~~~~kL~dfg~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~ 210 (293)
T cd06647 142 KSDNILLGM--DGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVE 210 (293)
T ss_pred CHHHEEEcC--CCCEEEccCcceeccccccccc------ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHh
Confidence 999999985 7899999999887776543211 11124445667777766666778899999877766553
No 294
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.30 E-value=1.6e-11 Score=129.68 Aligned_cols=184 Identities=15% Similarity=0.079 Sum_probs=113.0
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
++||.|++|.||+|+. +|+.||||..++...... .....+|..
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~-----------------------------------~~~~~~E~~ 55 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA-----------------------------------PFTAIREAS 55 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCC-----------------------------------chhHHHHHH
Confidence 6899999999999998 589999998765321100 001124555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+.++ . ++++.-..-+.......++||||++| +|.++.......++...+...+ +-..+..+|..|++|+|+
T Consensus 56 ~l~~l----~-h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl 129 (291)
T cd07844 56 LLKDL----K-HANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDL 129 (291)
T ss_pred HHhhC----C-CcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccC
Confidence 55544 2 23322222222334567999999997 7776543322234444333322 223478899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~l~ 531 (760)
+|.||++++ ++.++|+|||.+.......... .. ......++++++... ...+...|+++++..+.+++.
T Consensus 130 ~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~-~~-----~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~ 199 (291)
T cd07844 130 KPQNLLISE--RGELKLADFGLARAKSVPSKTY-SN-----EVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMAT 199 (291)
T ss_pred CHHHEEEcC--CCCEEECccccccccCCCCccc-cc-----cccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHh
Confidence 999999986 7899999999987653221110 00 011233445554432 334566799999877766653
No 295
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.30 E-value=5e-11 Score=124.79 Aligned_cols=182 Identities=15% Similarity=0.145 Sum_probs=112.5
Q ss_pred ccccccccEEEEEEE--CCe--eEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGE--EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~--~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.+|.|++|.||+|++ +|. .|++|..+..... +....+.+|.
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~-----------------------------------~~~~~~~~E~ 46 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK-----------------------------------DDHRDFAGEL 46 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCH-----------------------------------HHHHHHHHHH
Confidence 689999999999998 354 5678865532111 1111234455
Q ss_pred HHHHHHHHhcCCCCce-eeceeeeccCCCeEEEEeecCCCchhhhhhhhh---------------cCCCHHHHHHHH--H
Q 004334 376 ANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRKRLGRYA--V 437 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V-~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~---------------~g~d~~~la~~l--v 437 (760)
..+.++. +++++ .+...+ ......+++|||++|++|.++..... ..+....+...+ +
T Consensus 47 ~~l~~l~----~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i 121 (270)
T cd05047 47 EVLCKLG----HHPNIINLLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 121 (270)
T ss_pred HHHHhhc----cCCCeeeEEEEE-ecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHH
Confidence 5555542 23332 222222 23345799999999999988753211 012223322222 2
Q ss_pred HHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCC
Q 004334 438 ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTG 517 (760)
Q Consensus 438 ~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~ 517 (760)
-..+..+|..|++|+|++|.||+++. ++.++++|||++.......... .......+++++.......+...
T Consensus 122 ~~al~~lH~~~i~H~dikp~nili~~--~~~~kl~dfgl~~~~~~~~~~~-------~~~~~~~y~apE~~~~~~~~~~~ 192 (270)
T cd05047 122 ARGMDYLSQKQFIHRDLAARNILVGE--NYVAKIADFGLSRGQEVYVKKT-------MGRLPVRWMAIESLNYSVYTTNS 192 (270)
T ss_pred HHHHHHHHHCCEeecccccceEEEcC--CCeEEECCCCCccccchhhhcc-------CCCCccccCChHHHccCCCCchh
Confidence 23478899999999999999999985 7899999999875432211110 01112346677776666667788
Q ss_pred ChHHHHHHHHHHH
Q 004334 518 DTTAVRRTAQFFL 530 (760)
Q Consensus 518 D~~al~~~~~~~l 530 (760)
|++++.-.+.+++
T Consensus 193 Di~slG~il~el~ 205 (270)
T cd05047 193 DVWSYGVLLWEIV 205 (270)
T ss_pred hHHHHHHHHHHHH
Confidence 9999987766654
No 296
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.29 E-value=2.6e-11 Score=125.64 Aligned_cols=183 Identities=12% Similarity=0.071 Sum_probs=116.2
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
+.||.|++|.||+|.. +++.|++|+........ ...+..|...
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~------------------------------------~~~~~~e~~~ 55 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLK------------------------------------QQDFQKEVQA 55 (261)
T ss_pred hhhccCCCccEEEeEecCCCcEEEEeccccchhh------------------------------------HHHHHHHHHH
Confidence 5789999999999999 68999999865421100 0112234433
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
+..+ .+...+.+... .......+++|||++|++|.++..... ...+...+...+ +-..+..+|..|++|+|+
T Consensus 56 l~~l----~~~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl 130 (261)
T cd05148 56 LKRL----RHKHLISLFAV-CSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDL 130 (261)
T ss_pred HhcC----CCcchhheeee-EecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence 3333 12111222222 233456799999999999998764322 123333333222 223367889999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|.||++++ ++.++++|||.+..+....... .-......+++++....+......|++++...+.+++
T Consensus 131 ~~~nilv~~--~~~~kl~d~g~~~~~~~~~~~~------~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~ 198 (261)
T cd05148 131 AARNILVGE--DLVCKVADFGLARLIKEDVYLS------SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMF 198 (261)
T ss_pred CcceEEEcC--CceEEEccccchhhcCCccccc------cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 999999986 7899999999998775432110 0011223456677666666777889999987766654
No 297
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.29 E-value=2.7e-11 Score=127.05 Aligned_cols=182 Identities=13% Similarity=0.131 Sum_probs=112.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|+. +|+.||||+.+....+. ....+.+|+.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-----------------------------------~~~~~~~E~~ 50 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEG-----------------------------------TPSTAIREIS 50 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEeccccccc-----------------------------------chHHHHHHHH
Confidence 6799999999999999 59999999876532110 0011234555
Q ss_pred HHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhh--cCCCHHHHHHHH--HHHHHHHHHhCCcc
Q 004334 377 NAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDE--LGVDRKRLGRYA--VESYLEQILSHGFF 450 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~--~g~d~~~la~~l--v~~~L~qI~~~Gff 450 (760)
.+.++. +++ +++++. ......+|||||++| .+.++..... ..++...+...+ +-..+..+|..|++
T Consensus 51 ~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 122 (284)
T cd07836 51 LMKELK-----HEN--IVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVL 122 (284)
T ss_pred HHHhhc-----CCC--EeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 555552 232 233332 334567999999997 6666543211 223444333322 22346788999999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~~~~~~ 529 (760)
|+|++|.||++++ ++.++++|||++..+......... ...+..++.++....+ ......|++++...+.++
T Consensus 123 h~dl~p~ni~~~~--~~~~~l~d~g~~~~~~~~~~~~~~------~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l 194 (284)
T cd07836 123 HRDLKPQNLLINK--RGELKLADFGLARAFGIPVNTFSN------EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEM 194 (284)
T ss_pred eCCCCHHHEEECC--CCcEEEeecchhhhhcCCcccccc------ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHH
Confidence 9999999999985 789999999998766433211000 0123344555554332 235567888888766655
Q ss_pred HH
Q 004334 530 LN 531 (760)
Q Consensus 530 l~ 531 (760)
+.
T Consensus 195 ~~ 196 (284)
T cd07836 195 IT 196 (284)
T ss_pred Hh
Confidence 43
No 298
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.29 E-value=1.9e-11 Score=133.14 Aligned_cols=190 Identities=17% Similarity=0.176 Sum_probs=124.4
Q ss_pred cccccccccEEEEEEEC--CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~--G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+-+|.|.+|.||.|+++ +...|+||.....- ... +.+ ....-|..
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l---~~r-----------------------------kKl-~Ra~tE~e 129 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESL---ASR-----------------------------KKL-KRAQTERE 129 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHH---hhh-----------------------------hHH-HHHHHHHH
Confidence 57999999999999995 58999999654210 000 000 00112222
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCe--EEEEeecCCCchhhhhhhhhcC---CCHHHHHHHHHHHHHHHHHhCCccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQ--ILTMEYVPGIKINRIQSLDELG---VDRKRLGRYAVESYLEQILSHGFFH 451 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~--vLVME~ieG~~L~d~~~l~~~g---~d~~~la~~lv~~~L~qI~~~GffH 451 (760)
.+.. .++-.+|..|..+.+.. +|+||||+|+.|..+.+-.... .+..+.-..-+-..|+++|-.||+.
T Consensus 130 IL~~-------lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivY 202 (459)
T KOG0610|consen 130 ILSL-------LDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVY 202 (459)
T ss_pred HHHh-------cCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceee
Confidence 3332 23456888898887765 8999999999998865432221 1222222333445689999999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccCh--hhHH------------------------HH-H-H-------------
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISP--NIRE------------------------GL-L-E------------- 490 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~--~~r~------------------------~l-~-~------------- 490 (760)
||+||+||||.+ +|.|.|.||-+..+.+- .... .+ . .
T Consensus 203 RDLKPENILvre--dGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~ 280 (459)
T KOG0610|consen 203 RDLKPENILVRE--DGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSL 280 (459)
T ss_pred ccCCcceeEEec--CCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccc
Confidence 999999999996 99999999998755421 0000 00 0 0
Q ss_pred -HHHH--------HhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 491 -AFYG--------IYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 491 -l~~a--------l~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
.+.| -+-++-++++++++.-.-....+|-|+++..+++|+
T Consensus 281 p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmL 329 (459)
T KOG0610|consen 281 PELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEML 329 (459)
T ss_pred hhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHH
Confidence 0111 123567888888888777777889999998777765
No 299
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.29 E-value=1.3e-11 Score=144.30 Aligned_cols=123 Identities=16% Similarity=0.148 Sum_probs=78.7
Q ss_pred CCCeEEEEeecCCCchhhhhhhhhcCC-----------------CH-H----HHHHHHHHHHHHHHHhCCccccCCCCCc
Q 004334 401 TTPQILTMEYVPGIKINRIQSLDELGV-----------------DR-K----RLGRYAVESYLEQILSHGFFHADPHPGN 458 (760)
Q Consensus 401 st~~vLVME~ieG~~L~d~~~l~~~g~-----------------d~-~----~la~~lv~~~L~qI~~~GffHaDpHPGN 458 (760)
....+|||||+++.+|.++........ .+ . .++.. +-..+.++|..|++|+|+||.|
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~q-ll~aL~yLH~~gIiHRDLKP~N 285 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQ-ILFALDGLHSTGIVHRDVKPQN 285 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHH-HHHHHHHHHHCCEEeCcCCHHH
Confidence 346799999999999988654221110 00 1 11222 2234788999999999999999
Q ss_pred EEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC----------------------CC
Q 004334 459 IAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV----------------------PT 516 (760)
Q Consensus 459 ILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~----------------------~~ 516 (760)
||+++ .++.++|+|||++..+....... ..-..+++.+++++...++... ..
T Consensus 286 ILl~~-~~~~~KL~DFGlA~~l~~~~~~~-----~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 286 IIFSE-GSGSFKIIDLGAAADLRVGINYI-----PKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred EEEeC-CCCcEEEEeCCCccccccccccC-----CcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 99984 35789999999998664321100 0112345667777755433222 23
Q ss_pred CChHHHHHHHHHHH
Q 004334 517 GDTTAVRRTAQFFL 530 (760)
Q Consensus 517 ~D~~al~~~~~~~l 530 (760)
.|++++.-.+.+++
T Consensus 360 ~DVwSlGviL~el~ 373 (566)
T PLN03225 360 FDIYSAGLIFLQMA 373 (566)
T ss_pred cccHHHHHHHHHHH
Confidence 49999998877665
No 300
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.29 E-value=1e-10 Score=116.74 Aligned_cols=139 Identities=24% Similarity=0.268 Sum_probs=103.1
Q ss_pred cccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
.+++.|.-+.++.+.+.|.++++|..-|.-...-+.|.++ -.....+||+.+
T Consensus 2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~kl----------------------------rr~Rt~~Earil 53 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKL----------------------------RRERTRREARIL 53 (204)
T ss_pred chhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHH----------------------------HHHHHHHHHHHH
Confidence 3678888899999988888899998777543332222211 012346789999
Q ss_pred HHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGN 458 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDpHPGN 458 (760)
.+.+.. .|.+|.+|.-......|||||++|..|.|..... +..+... +...+.-+|..||+|+||.+.|
T Consensus 54 ~~a~~~-----GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~-----~~~~~r~-vG~~vg~lH~~givHGDLTtsN 122 (204)
T COG3642 54 AKAREA-----GVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA-----RPDLLRE-VGRLVGKLHKAGIVHGDLTTSN 122 (204)
T ss_pred HHHHHc-----CCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc-----chHHHHH-HHHHHHHHHhcCeecCCCccce
Confidence 988653 6899999988888889999999999998765322 1122222 2334667899999999999999
Q ss_pred EEEeccCCCcEEEEeecceec
Q 004334 459 IAVDDVNGGRLIFYDFGMMGS 479 (760)
Q Consensus 459 ILV~~~~~g~l~LiDFG~v~~ 479 (760)
|++. ++++++||||+...
T Consensus 123 iIl~---~~~i~~IDfGLg~~ 140 (204)
T COG3642 123 IILS---GGRIYFIDFGLGEF 140 (204)
T ss_pred EEEe---CCcEEEEECCcccc
Confidence 9997 56799999999873
No 301
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.29 E-value=2e-11 Score=128.60 Aligned_cols=182 Identities=16% Similarity=0.190 Sum_probs=110.9
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|.. +|+.||+|+.+....+.. ...+.+|+.
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~-----------------------------------~~~~~~e~~ 51 (286)
T cd06622 7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESK-----------------------------------FNQIIMELD 51 (286)
T ss_pred hhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHH-----------------------------------HHHHHHHHH
Confidence 4799999999999999 599999997654221110 011223333
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh--hcCCCHHHHHHHHH--HHHHHHHHh-CCccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD--ELGVDRKRLGRYAV--ESYLEQILS-HGFFH 451 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~--~~g~d~~~la~~lv--~~~L~qI~~-~GffH 451 (760)
.+.++. +..-+.+...+ ......++||||++|.+|.++.... ...++...+..... -..+..+|. .|++|
T Consensus 52 ~l~~~~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H 126 (286)
T cd06622 52 ILHKAV----SPYIVDFYGAF-FIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIH 126 (286)
T ss_pred HHHhcC----CCcHHhhhhhe-ecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEee
Confidence 333331 11111111111 1234568999999999998765432 11333333322222 223567785 69999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC------CCCCChHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL------VPTGDTTAVRRT 525 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~------~~~~D~~al~~~ 525 (760)
+|++|.||+++. ++.++++|||++..+....... ..+...+++++....+.. +...|++++...
T Consensus 127 ~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~i 196 (286)
T cd06622 127 RDVKPTNVLVNG--NGQVKLCDFGVSGNLVASLAKT--------NIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLS 196 (286)
T ss_pred CCCCHHHEEECC--CCCEEEeecCCcccccCCcccc--------CCCccCccCcchhcCCCCCccCCCCcccchHhHHHH
Confidence 999999999986 7899999999987764332211 113344566666544322 456799999877
Q ss_pred HHHHH
Q 004334 526 AQFFL 530 (760)
Q Consensus 526 ~~~~l 530 (760)
+.+++
T Consensus 197 l~~l~ 201 (286)
T cd06622 197 ILEMA 201 (286)
T ss_pred HHHHH
Confidence 76654
No 302
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.29 E-value=3.7e-11 Score=123.23 Aligned_cols=182 Identities=18% Similarity=0.169 Sum_probs=115.0
Q ss_pred cccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 301 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 301 IasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
||.|++|+||++.. +|+.|++|+.+.+....- .-...+..|...+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~---------------------------------~~~~~~~~e~~~l 47 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKR---------------------------------KEVEHTLTERNIL 47 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcch---------------------------------HHHHHHHHHHHHH
Confidence 68999999999999 489999998766321110 0001122333333
Q ss_pred HHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 379 ELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
+++. ++ .++.++. +.....+++|||++|.+|.+...... .++...+...+ +-..+..+|..|++|+|+
T Consensus 48 ~~l~-----h~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l 119 (250)
T cd05123 48 SRIN-----HP--FIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEG-RFSEERARFYAAEIVLALEYLHSLGIIYRDL 119 (250)
T ss_pred HHcC-----CC--cHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCC
Confidence 3332 11 2222222 23345699999999999988654321 23444333322 233467889999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+|.||+++. ++.++++|||++......... .....+...++.++...-...++..|.+++.-.+.+++.
T Consensus 120 ~p~ni~~~~--~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~ 188 (250)
T cd05123 120 KPENILLDA--DGHIKLTDFGLAKELSSEGSR------TNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLT 188 (250)
T ss_pred CcceEEEcC--CCcEEEeecCcceecccCCCc------ccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHH
Confidence 999999986 789999999999877553210 011224445566666655556677899998877666553
No 303
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.29 E-value=3.9e-11 Score=129.76 Aligned_cols=191 Identities=17% Similarity=0.113 Sum_probs=115.8
Q ss_pred ccccc--cccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 300 PIAAA--SLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 300 PIasa--SiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
-||.| +++.||+++. +|+.||||..+..... ++....+.+|.
T Consensus 5 ~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~----------------------------------~~~~~~~~~e~ 50 (327)
T cd08227 5 VIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT----------------------------------NEMVTFLQGEL 50 (327)
T ss_pred hccccccceEEEEEEeecccCcEEEEEEechhhcc----------------------------------HHHHHHHHHHH
Confidence 47777 8899999998 6999999986542110 11122234455
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~-~~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
..+..+ .+..-+.+.. +....+..++||||++|+++.++.... ..+++...+...+ +-..+..+|..|++|+
T Consensus 51 ~~l~~l----~hpniv~~~~-~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~ 125 (327)
T cd08227 51 HVSKLF----NHPNIVPYRA-TFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHR 125 (327)
T ss_pred HHHHhc----CCCCeeeEEE-EEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecC
Confidence 544443 2222222222 223446679999999999999876432 2234444443332 2234788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhH-HHHHHHHHHHhhcCHHHHHHHHHHcC--CCCCCCChHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIR-EGLLEAFYGIYEKDADKVLQAMVQMG--VLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r-~~l~~l~~al~~~D~~~v~~~l~~lG--~~~~~~D~~al~~~~~~~ 529 (760)
|+||.||+++. ++++++.|||....+..... .....-+.....+...+++++....+ ..+...|++++.-.+.++
T Consensus 126 dlkp~Nil~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el 203 (327)
T cd08227 126 SVKASHILISV--DGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACEL 203 (327)
T ss_pred CCChhhEEEec--CCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHH
Confidence 99999999986 78999999986654422111 00000000011123346677766542 345678999998877666
Q ss_pred HH
Q 004334 530 LN 531 (760)
Q Consensus 530 l~ 531 (760)
+.
T Consensus 204 ~~ 205 (327)
T cd08227 204 AN 205 (327)
T ss_pred HH
Confidence 54
No 304
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.29 E-value=9.1e-11 Score=121.16 Aligned_cols=182 Identities=13% Similarity=0.127 Sum_probs=118.5
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCC-chhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPG-LKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPg-i~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
+.+|.|++|.||.++. +|+.|+||..... ... .....+.+|.
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------~~~~~~~~e~ 50 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSP-----------------------------------KEREESRKEV 50 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCCh-----------------------------------HHHHHHHHHH
Confidence 5799999999999998 5899999975421 000 0011233444
Q ss_pred HHHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhCCcc
Q 004334 376 ANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSHGFF 450 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~l--v~~~L~qI~~~Gff 450 (760)
..++++ .+ ++ +++++. +.....++||||++|.+|.+...... ...+...+...+ +...+..+|..|++
T Consensus 51 ~~l~~l----~~-~~--i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 123 (256)
T cd08218 51 AVLSNM----KH-PN--IVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKIL 123 (256)
T ss_pred HHHHhC----CC-CC--eeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 444444 22 22 233332 33456799999999999988654322 223433333322 22336778999999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|+|++|.||+++. ++.++++|||++..+....... ....+...+++++...-+..+...|+++++..+.+++
T Consensus 124 h~~l~~~nil~~~--~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~ 195 (256)
T cd08218 124 HRDIKSQNIFLTK--DGTIKLGDFGIARVLNSTVELA------RTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMC 195 (256)
T ss_pred cCCCCHHHEEEcC--CCCEEEeeccceeecCcchhhh------hhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHH
Confidence 9999999999985 7899999999998775543211 1112445567777776666677789999987766554
No 305
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.28 E-value=6.3e-11 Score=127.29 Aligned_cols=187 Identities=17% Similarity=0.125 Sum_probs=117.2
Q ss_pred ccccccccccEEEEEEE---------CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL---------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECA 368 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l---------~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~ 368 (760)
.+.||.|++|.||+|+. .+..||+|+.+...... ..
T Consensus 17 ~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~-----------------------------------~~ 61 (314)
T cd05099 17 GKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDK-----------------------------------DL 61 (314)
T ss_pred eeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChH-----------------------------------HH
Confidence 36899999999999975 24579999876532211 00
Q ss_pred HHHHHHHHHHHHHHHhcCCCCc-eeeceeeeccCCCeEEEEeecCCCchhhhhhhhh---------------cCCCHHHH
Q 004334 369 SVLYQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRKRL 432 (760)
Q Consensus 369 ~~l~~EA~nl~~f~~~~~~~~~-V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~---------------~g~d~~~l 432 (760)
..+.+|...+.++ .++++ +.+..++ ......+++|||++|++|.++..... ..+....+
T Consensus 62 ~~~~~E~~~l~~l----~~h~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~ 136 (314)
T cd05099 62 ADLISEMELMKLI----GKHKNIINLLGVC-TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDL 136 (314)
T ss_pred HHHHHHHHHHHhc----cCCCCeeeEEEEE-ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHH
Confidence 1123343333332 12232 2222222 23355799999999999998764321 11222222
Q ss_pred HHHH--HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc
Q 004334 433 GRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM 510 (760)
Q Consensus 433 a~~l--v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l 510 (760)
.... +-..+..+|..|++|+|++|+||++++ ++.++|+|||.+..+........ . ........+++++....
T Consensus 137 ~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~--~~~~kL~Dfg~~~~~~~~~~~~~--~--~~~~~~~~y~aPE~~~~ 210 (314)
T cd05099 137 VSCAYQVARGMEYLESRRCIHRDLAARNVLVTE--DNVMKIADFGLARGVHDIDYYKK--T--SNGRLPVKWMAPEALFD 210 (314)
T ss_pred HHHHHHHHHHHHHHHHCCeeeccccceeEEEcC--CCcEEEccccccccccccccccc--c--ccCCCCccccCHHHHcc
Confidence 2221 233468899999999999999999985 78999999999987754321110 0 00112245777887777
Q ss_pred CCCCCCCChHHHHHHHHHHH
Q 004334 511 GVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 511 G~~~~~~D~~al~~~~~~~l 530 (760)
+..+...|++++.-.+.+++
T Consensus 211 ~~~~~~~DiwslG~~l~el~ 230 (314)
T cd05099 211 RVYTHQSDVWSFGILMWEIF 230 (314)
T ss_pred CCcCccchhhHHHHHHHHHH
Confidence 77777899999987766554
No 306
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.28 E-value=5.2e-11 Score=125.14 Aligned_cols=186 Identities=16% Similarity=0.096 Sum_probs=115.3
Q ss_pred cccccccccEEEEEEEC-------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~-------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
+.||.|++|.||+|.+. +..|++|......... ....+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~-----------------------------------~~~~~ 56 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQ-----------------------------------DESDF 56 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHH-----------------------------------HHHHH
Confidence 68999999999999983 3678888765422111 01123
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhc------CCCHHHHHHHH--HHHHH
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDEL------GVDRKRLGRYA--VESYL 441 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~------g~d~~~la~~l--v~~~L 441 (760)
.+|...+.++ . +++ +.+.+. ......+++|||++|++|.++...... .++...+...+ +-..+
T Consensus 57 ~~e~~~l~~l----~-~~~--i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l 129 (277)
T cd05036 57 LMEALIMSKF----N-HQN--IVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGC 129 (277)
T ss_pred HHHHHHHHhC----C-CCC--EeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 3444444443 2 222 223332 233457999999999999987543221 23333333322 22336
Q ss_pred HHHHhCCccccCCCCCcEEEeccC-CCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChH
Q 004334 442 EQILSHGFFHADPHPGNIAVDDVN-GGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 520 (760)
Q Consensus 442 ~qI~~~GffHaDpHPGNILV~~~~-~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~ 520 (760)
..+|..|++|+|++|.||++++.. +..++|+|||++..+....-... .+.......+++++....+..+...|++
T Consensus 130 ~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diw 205 (277)
T cd05036 130 KYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRK----GGRAMLPIKWMPPEAFLDGIFTSKTDVW 205 (277)
T ss_pred HHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceec----CCCCCccHhhCCHHHHhcCCcCchhHHH
Confidence 788999999999999999998522 23589999999987743211000 0000113456777777767778889999
Q ss_pred HHHHHHHHHH
Q 004334 521 AVRRTAQFFL 530 (760)
Q Consensus 521 al~~~~~~~l 530 (760)
++.-.+.+++
T Consensus 206 slG~il~el~ 215 (277)
T cd05036 206 SFGVLLWEIF 215 (277)
T ss_pred HHHHHHHHHH
Confidence 9987776654
No 307
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.28 E-value=1.9e-11 Score=127.15 Aligned_cols=119 Identities=13% Similarity=0.045 Sum_probs=80.5
Q ss_pred CCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEeccCC------CcEEEEe
Q 004334 402 TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNG------GRLIFYD 473 (760)
Q Consensus 402 t~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDpHPGNILV~~~~~------g~l~LiD 473 (760)
...+++|||++|++|.++........+.......+ +-..+..+|..|++|+|++|.||++++.++ +.++++|
T Consensus 72 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d 151 (258)
T cd05078 72 DESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSD 151 (258)
T ss_pred CCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecc
Confidence 56799999999999988764433334443332222 223468899999999999999999985211 1379999
Q ss_pred ecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHH
Q 004334 474 FGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 474 FG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~l 530 (760)
||....+.+... ..++..+++++...- ...+...|++++...+.+++
T Consensus 152 ~g~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~ 199 (258)
T cd05078 152 PGISITVLPKEI----------LLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIF 199 (258)
T ss_pred cccccccCCchh----------ccccCCccCchhccCCCCCCchhhHHHHHHHHHHHH
Confidence 998876544221 234455667776553 34566789999987776654
No 308
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.28 E-value=2.2e-11 Score=132.81 Aligned_cols=195 Identities=19% Similarity=0.237 Sum_probs=117.8
Q ss_pred HhCCChhhhhcccC-ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccch
Q 004334 284 ELGAPLDDVFERFD-VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDW 360 (760)
Q Consensus 284 elG~~~~~iF~~fd-~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l 360 (760)
+.+....++...|. .++||.|++|.||+|+. +|+.||||+.+......
T Consensus 5 ~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~----------------------------- 55 (342)
T cd07879 5 EVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSE----------------------------- 55 (342)
T ss_pred hhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccc-----------------------------
Confidence 44545555555564 48999999999999997 59999999865421110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeec-----cCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH
Q 004334 361 VAIYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWE-----YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY 435 (760)
Q Consensus 361 ~~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e-----~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~ 435 (760)
.+...+.+|...+.++. +..-+.+..++.. .....++||||+++ .+.++. ...+....+...
T Consensus 56 -----~~~~~~~~e~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~---~~~~~~~~~~~~ 122 (342)
T cd07879 56 -----IFAKRAYRELTLLKHMQ----HENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIM---GHPLSEDKVQYL 122 (342)
T ss_pred -----cchhHHHHHHHHHHhcC----CCCccchhheecccccCCCCceEEEEeccccc-CHHHHH---cCCCCHHHHHHH
Confidence 00111233433333331 2222223332221 12345899999975 444432 122333333332
Q ss_pred H--HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CC
Q 004334 436 A--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GV 512 (760)
Q Consensus 436 l--v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~ 512 (760)
+ +-..+..+|..|++|+|++|.||+++. ++.++|+|||++...+..... ..++..+++++.... ..
T Consensus 123 ~~qi~~aL~~LH~~~i~H~dlkp~NIll~~--~~~~kL~dfg~~~~~~~~~~~---------~~~~~~y~aPE~~~~~~~ 191 (342)
T cd07879 123 VYQMLCGLKYIHSAGIIHRDLKPGNLAVNE--DCELKILDFGLARHADAEMTG---------YVVTRWYRAPEVILNWMH 191 (342)
T ss_pred HHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEeeCCCCcCCCCCCCC---------ceeeecccChhhhcCccc
Confidence 2 223478899999999999999999986 889999999998876443211 122344566666543 23
Q ss_pred CCCCCChHHHHHHHHHHHH
Q 004334 513 LVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 513 ~~~~~D~~al~~~~~~~l~ 531 (760)
.+...|+++++-.+.+++.
T Consensus 192 ~~~~~Dv~slGvil~el~~ 210 (342)
T cd07879 192 YNQTVDIWSVGCIMAEMLT 210 (342)
T ss_pred cCchHHHHHHHHHHHHHHh
Confidence 4567899999877766553
No 309
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.28 E-value=1.7e-11 Score=130.75 Aligned_cols=137 Identities=16% Similarity=0.132 Sum_probs=83.8
Q ss_pred CceeeceeeeccCC------CeEEEEeecCCCchhhhhhhhhcCCCHHH---HHHHHHHHHHHHHHhCCccccCCCCCcE
Q 004334 389 DYVKVPTIFWEYTT------PQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLEQILSHGFFHADPHPGNI 459 (760)
Q Consensus 389 ~~V~VP~vy~e~st------~~vLVME~ieG~~L~d~~~l~~~g~d~~~---la~~lv~~~L~qI~~~GffHaDpHPGNI 459 (760)
.+..+|..+..... -.+++||++.+ .+.+..... ....... ++..++ ..+..+|..|++|+|+||.||
T Consensus 81 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~i~~qi~-~~l~~lH~~~iiHrDiKp~Ni 157 (294)
T PHA02882 81 DHLGIPKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRI-KCKNKKLIKNIMKDML-TTLEYIHEHGISHGDIKPENI 157 (294)
T ss_pred CCCCCCcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhh-ccCCHHHHHHHHHHHH-HHHHHHHhCCeecCCCCHHHE
Confidence 34456666642211 23678887654 333332211 1122222 222222 347789999999999999999
Q ss_pred EEeccCCCcEEEEeecceeccChhhHHH-HHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 460 AVDDVNGGRLIFYDFGMMGSISPNIREG-LLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 460 LV~~~~~g~l~LiDFG~v~~l~~~~r~~-l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|+++ ++.++|+|||++..+....... +..-......+.+.+++++.......+...|++++.-.+.+++
T Consensus 158 ll~~--~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~ 227 (294)
T PHA02882 158 MVDG--NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWA 227 (294)
T ss_pred EEcC--CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 9985 7899999999998764322110 0000111224667778888777666778889999987766654
No 310
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.28 E-value=4.3e-11 Score=124.14 Aligned_cols=185 Identities=14% Similarity=0.147 Sum_probs=116.1
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+++|.|++|.||+|.. +++.|++|+..+.... ...+.+|..
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-------------------------------------~~~~~~e~~ 54 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDE-------------------------------------EEEIKEEYN 54 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCchh-------------------------------------HHHHHHHHH
Confidence 6899999999999999 5889999987653210 012234444
Q ss_pred HHHHHHHhcCCCCceeeceeeec-----cCCCeEEEEeecCCCchhhhhhhhh---cCCCHHHHHHHH--HHHHHHHHHh
Q 004334 377 NAELFASNFKDMDYVKVPTIFWE-----YTTPQILTMEYVPGIKINRIQSLDE---LGVDRKRLGRYA--VESYLEQILS 446 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e-----~st~~vLVME~ieG~~L~d~~~l~~---~g~d~~~la~~l--v~~~L~qI~~ 446 (760)
.+.++.. +..-+.+...+.. .....+++|||++|.+|.++..... ..++...+.... +-..+..+|.
T Consensus 55 ~l~~~~~---h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~ 131 (275)
T cd06608 55 ILRKYSN---HPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE 131 (275)
T ss_pred HHHHhcC---CCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 4444321 1111222222211 1233689999999999988754321 223333332222 2234678899
Q ss_pred CCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-----CCCCCCChHH
Q 004334 447 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-----VLVPTGDTTA 521 (760)
Q Consensus 447 ~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-----~~~~~~D~~a 521 (760)
.|++|+|++|.||+++. ++.++|+|||++..+....... ....+...+++++..... ..+...|+++
T Consensus 132 ~~i~H~~l~p~ni~~~~--~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~s 203 (275)
T cd06608 132 NKVIHRDIKGQNILLTK--NAEVKLVDFGVSAQLDSTLGRR------NTFIGTPYWMAPEVIACDEQPDASYDARSDVWS 203 (275)
T ss_pred CCcccCCCCHHHEEEcc--CCeEEECCCccceecccchhhh------cCccccccccCHhHhcccccccCCccccccHHH
Confidence 99999999999999986 7899999999998765433211 111244556777765432 2345689999
Q ss_pred HHHHHHHHHH
Q 004334 522 VRRTAQFFLN 531 (760)
Q Consensus 522 l~~~~~~~l~ 531 (760)
++..+.+++.
T Consensus 204 lG~il~~l~~ 213 (275)
T cd06608 204 LGITAIELAD 213 (275)
T ss_pred hHHHHHHHHh
Confidence 9877766553
No 311
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.28 E-value=2.6e-11 Score=132.50 Aligned_cols=184 Identities=21% Similarity=0.226 Sum_probs=113.7
Q ss_pred cccC-ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHH
Q 004334 294 ERFD-VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 370 (760)
Q Consensus 294 ~~fd-~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~ 370 (760)
+.|+ .++||+|++|.||+|.. +|+.||||+........ .....
T Consensus 17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------~~~~~ 62 (345)
T cd07877 17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI----------------------------------IHAKR 62 (345)
T ss_pred CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhh----------------------------------HHHHH
Confidence 3443 36899999999999997 69999999876532111 00112
Q ss_pred HHHHHHHHHHHHHhcCCCCceeeceeee-----ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHH---HHHHHHHHHHH
Q 004334 371 LYQEAANAELFASNFKDMDYVKVPTIFW-----EYTTPQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLE 442 (760)
Q Consensus 371 l~~EA~nl~~f~~~~~~~~~V~VP~vy~-----e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~---la~~lv~~~L~ 442 (760)
+.+|...+.+++ +..-+.+..++. +.....+++|+++ |..|.++.... .+.... ++..++ ..+.
T Consensus 63 ~~~Ei~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~-~aL~ 134 (345)
T cd07877 63 TYRELRLLKHMK----HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQIL-RGLK 134 (345)
T ss_pred HHHHHHHHHHcC----CCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHH-HHHH
Confidence 344555555552 222233333332 1223467888887 66787764322 233332 222223 3468
Q ss_pred HHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHH
Q 004334 443 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTA 521 (760)
Q Consensus 443 qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~a 521 (760)
.+|..|++|+|++|.||+++. ++.++|+|||++......... ..+...+++++.... ...++..|+++
T Consensus 135 ~LH~~~ivH~dlkp~NIll~~--~~~~kl~dfg~~~~~~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~~Dvws 203 (345)
T cd07877 135 YIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEMTG---------YVATRWYRAPEIMLNWMHYNQTVDIWS 203 (345)
T ss_pred HHHHCCeeecCCChHHEEEcC--CCCEEEecccccccccccccc---------cccCCCccCHHHHhCccCCCchhhHHH
Confidence 899999999999999999986 789999999998776443211 112333455655433 33456789999
Q ss_pred HHHHHHHHH
Q 004334 522 VRRTAQFFL 530 (760)
Q Consensus 522 l~~~~~~~l 530 (760)
++-.+.+++
T Consensus 204 lG~il~el~ 212 (345)
T cd07877 204 VGCIMAELL 212 (345)
T ss_pred HHHHHHHHH
Confidence 987776654
No 312
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.28 E-value=5.8e-11 Score=123.74 Aligned_cols=190 Identities=16% Similarity=0.075 Sum_probs=118.7
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.|++|+......... ..+....+.+|+.
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~-------------------------------~~~~~~~~~~ei~ 56 (264)
T cd06653 8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQE-------------------------------TSKEVNALECEIQ 56 (264)
T ss_pred eeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccch-------------------------------hhHHHHHHHHHHH
Confidence 6799999999999998 589999997643211100 0011123455666
Q ss_pred HHHHHHHhcCCCCceeeceeeecc-CCCeEEEEeecCCCchhhhhhhhhcCCCHHH---HHHHHHHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~-st~~vLVME~ieG~~L~d~~~l~~~g~d~~~---la~~lv~~~L~qI~~~GffHa 452 (760)
.+.++. +..-+.+...+... ....+++|||++|.+|.+..... ...+... ++..++ ..+..+|..|++|+
T Consensus 57 ~l~~l~----h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~-~al~~LH~~~i~H~ 130 (264)
T cd06653 57 LLKNLR----HDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAY-GALTENVTRRYTRQIL-QGVSYLHSNMIVHR 130 (264)
T ss_pred HHHHcC----CCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHc-CCCCHHHHHHHHHHHH-HHHHHHHhCCEecC
Confidence 555552 22223333333222 23468999999999998865321 1223222 222233 34678899999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|++|+||++++ ++.+++.|||.+..+......... .....+...++++++......+...|++++...+.+++
T Consensus 131 dl~p~ni~i~~--~~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 203 (264)
T cd06653 131 DIKGANILRDS--AGNVKLGDFGASKRIQTICMSGTG---IKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEML 203 (264)
T ss_pred CCCHHHEEEcC--CCCEEECccccccccccccccCcc---ccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHH
Confidence 99999999985 789999999999876432110000 00112445566777766555667789999987776654
No 313
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.28 E-value=4.3e-11 Score=126.35 Aligned_cols=184 Identities=17% Similarity=0.114 Sum_probs=114.7
Q ss_pred cccccccccEEEEEEE-------CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-------~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
..||.|++|+||+|.. ++..||||+.+.+.... ....+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~-----------------------------------~~~~~ 55 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD-----------------------------------MQADF 55 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHH-----------------------------------HHHHH
Confidence 5799999999999986 35789999876532111 11123
Q ss_pred HHHHHHHHHHHHhcCCCCc-eeeceeeeccCCCeEEEEeecCCCchhhhhhhhhc---------------------CCCH
Q 004334 372 YQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL---------------------GVDR 429 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~-V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~---------------------g~d~ 429 (760)
.+|+..+.++ ++++ +.+...+ ......+++|||++|++|.++...... .++.
T Consensus 56 ~~ei~~l~~l-----~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (288)
T cd05050 56 QREAALMAEF-----DHPNIVKLLGVC-AVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSC 129 (288)
T ss_pred HHHHHHHHhc-----CCCchheEEEEE-cCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCH
Confidence 3454444444 2222 2222222 233467999999999999887642110 1122
Q ss_pred HH---HHHHHHHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHH
Q 004334 430 KR---LGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQA 506 (760)
Q Consensus 430 ~~---la~~lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~ 506 (760)
.. ++..++. .+..+|..|++|+|++|.||+++. ++.++++|||+...+....-.. . .........+++++
T Consensus 130 ~~~~~~~~~i~~-aL~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~---~-~~~~~~~~~y~aPE 202 (288)
T cd05050 130 TEQLCIAKQVAA-GMAYLSERKFVHRDLATRNCLVGE--NMVVKIADFGLSRNIYSADYYK---A-SENDAIPIRWMPPE 202 (288)
T ss_pred HHHHHHHHHHHH-HHHHHHhCCeecccccHhheEecC--CCceEECccccceecccCcccc---c-cCCCccChhhcCHH
Confidence 22 2222222 367899999999999999999985 8899999999987653321000 0 00001123466777
Q ss_pred HHHcCCCCCCCChHHHHHHHHHHH
Q 004334 507 MVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 507 l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
....+..+...|++++.-.+.+++
T Consensus 203 ~~~~~~~~~~~Dv~slG~il~el~ 226 (288)
T cd05050 203 SIFYNRYTTESDVWAYGVVLWEIF 226 (288)
T ss_pred HHhcCCCCchhHHHHHHHHHHHHH
Confidence 776666677889999987766654
No 314
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.28 E-value=4.9e-11 Score=111.49 Aligned_cols=134 Identities=24% Similarity=0.327 Sum_probs=95.4
Q ss_pred cccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
++++.|+++.||+++.++..++||+.++... ...+..|...+
T Consensus 4 ~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~--------------------------------------~~~~~~e~~~~ 45 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKDEDYVLKINPSREK--------------------------------------GADREREVAIL 45 (155)
T ss_pred eecccccccceEEEEecCCeEEEEecCCCCc--------------------------------------hhHHHHHHHHH
Confidence 5799999999999999888999998766321 11234566666
Q ss_pred HHHHHhcCCCCceeeceeeeccC--CCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHh---CCccccC
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYT--TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILS---HGFFHAD 453 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~s--t~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~---~GffHaD 453 (760)
+.+.+. ...+|+++.... +..+++|||++|.++..+. ......++. .+...+..+|. .|++|+|
T Consensus 46 ~~l~~~-----~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~~-----~~~~~~~~~-~~~~~l~~lh~~~~~~i~H~D 114 (155)
T cd05120 46 QLLARK-----GLPVPKVLASGESDGWSYLLMEWIEGETLDEVS-----EEEKEDIAE-QLAELLAKLHQLPLLVLCHGD 114 (155)
T ss_pred HHHHHc-----CCCCCeEEEEcCCCCccEEEEEecCCeecccCC-----HHHHHHHHH-HHHHHHHHHhCCCceEEEecC
Confidence 666553 356777765443 3689999999998886540 011122222 23344667776 4799999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChh
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPN 483 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~ 483 (760)
+||+||++++ ++.++++|||.+...++.
T Consensus 115 l~~~Nil~~~--~~~~~l~Df~~~~~~~~~ 142 (155)
T cd05120 115 LHPGNILVDD--GKILGIIDWEYAGYGPPA 142 (155)
T ss_pred CCcceEEEEC--CcEEEEEecccccCCChH
Confidence 9999999985 689999999999876543
No 315
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.27 E-value=3.8e-11 Score=127.06 Aligned_cols=186 Identities=16% Similarity=0.119 Sum_probs=116.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|.. +|+.|+||..+..... +.+.....+|..
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------------------------~~~~~~~~~e~~ 56 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK----------------------------------EGFPITSLREIN 56 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc----------------------------------ccchhhHHHHHH
Confidence 6899999999999999 5899999986542111 011112334555
Q ss_pred HHHHHHHhcCCCCceeeceeeec-cCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWE-YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e-~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
.+.++. +..-+.+...+.. .....+++|||++| +|.++.......++...+...+ +-..+..+|..|++|+|
T Consensus 57 ~l~~l~----h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~d 131 (293)
T cd07843 57 ILLKLQ----HPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRD 131 (293)
T ss_pred HHHhcC----CCCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence 555542 2222222222211 12678999999987 7776554322234444443333 22347889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~~~~~~l~ 531 (760)
++|.||+++. ++.++|+|||.+..+....... ....++..+++++..... ..+...|++++...+.+++.
T Consensus 132 l~p~nili~~--~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~ 202 (293)
T cd07843 132 LKTSNLLLNN--RGILKICDFGLAREYGSPLKPY------TQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLT 202 (293)
T ss_pred CCHHHEEECC--CCcEEEeecCceeeccCCcccc------ccccccccccCchhhcCCccccchhhHHHHHHHHHHHHh
Confidence 9999999986 7899999999998776542111 001123445666655432 24566899999877666543
No 316
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.27 E-value=7.3e-11 Score=123.31 Aligned_cols=186 Identities=15% Similarity=0.101 Sum_probs=117.2
Q ss_pred cccccccccEEEEEEEC-------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~-------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
..||.|++|.||+|... +..|++|....+.... ....+
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~-----------------------------------~~~~~ 56 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMR-----------------------------------ERIEF 56 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHH-----------------------------------HHHHH
Confidence 57999999999999983 2689999865431100 01122
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhc---------CCCHHHHHHHH--HHHH
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL---------GVDRKRLGRYA--VESY 440 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~---------g~d~~~la~~l--v~~~ 440 (760)
.+|+..+..+ .+..-+.+...+ ......+++|||++|++|.++...... ..+...+...+ +-..
T Consensus 57 ~~e~~~l~~~----~~~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (277)
T cd05032 57 LNEASVMKEF----NCHHVVRLLGVV-STGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADG 131 (277)
T ss_pred HHHHHHHHhC----CCCceeEEEEEE-cCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHH
Confidence 3444444443 222222222222 334567999999999999987532111 12222333222 2234
Q ss_pred HHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChH
Q 004334 441 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 520 (760)
Q Consensus 441 L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~ 520 (760)
+..+|..|++|+|++|.||+++. ++.++|+|||++..+........ .+.......+++++...-+..++..|++
T Consensus 132 l~~lH~~~i~H~di~p~nill~~--~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 205 (277)
T cd05032 132 MAYLAAKKFVHRDLAARNCMVAE--DLTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKDGVFTTKSDVW 205 (277)
T ss_pred HHHHHhCCccccccChheEEEcC--CCCEEECCcccchhhccCccccc----CCCCCccccccCHHHHhcCCCCcccchH
Confidence 67899999999999999999986 78999999999876644321000 0111123456777777777778889999
Q ss_pred HHHHHHHHHH
Q 004334 521 AVRRTAQFFL 530 (760)
Q Consensus 521 al~~~~~~~l 530 (760)
++.-.+.+++
T Consensus 206 slG~il~el~ 215 (277)
T cd05032 206 SFGVVLWEMA 215 (277)
T ss_pred HHHHHHHHhh
Confidence 9987766554
No 317
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.27 E-value=6.2e-11 Score=123.67 Aligned_cols=193 Identities=15% Similarity=0.101 Sum_probs=120.9
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.+.+|.|++|.||+|.. +|+.|++|+.+......- ..+....+.+|+
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~-------------------------------~~~~~~~~~~e~ 55 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPE-------------------------------TSKEVSALECEI 55 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCch-------------------------------hHHHHHHHHHHH
Confidence 36899999999999998 589999998654321100 001122345566
Q ss_pred HHHHHHHHhcCCCCceeeceeeecc-CCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCcccc
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHA 452 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~-st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHa 452 (760)
..+.++. +..-+.+...+... ....+++|||++|.+|.+...... ..+....... .+...+..+|..|++|+
T Consensus 56 ~~l~~l~----h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~i~H~ 130 (266)
T cd06651 56 QLLKNLQ----HERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSNMIVHR 130 (266)
T ss_pred HHHHHcC----CCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeC
Confidence 6555552 22223333333322 234689999999999988653221 2333322222 12234678999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
|++|.||++++ ++.++|+|||++..+........ . .....+...+++++.......+...|++++.-.+.+++.
T Consensus 131 ~l~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~--~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~ 204 (266)
T cd06651 131 DIKGANILRDS--AGNVKLGDFGASKRLQTICMSGT--G-IRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLT 204 (266)
T ss_pred CCCHHHEEECC--CCCEEEccCCCccccccccccCC--c-cccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHH
Confidence 99999999975 78999999999876643211100 0 001224455677777766556677899999877766553
No 318
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.27 E-value=3.7e-11 Score=126.90 Aligned_cols=187 Identities=17% Similarity=0.169 Sum_probs=111.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||+.+...... .....+.+|..
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~----------------------------------~~~~~~~~E~~ 52 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE----------------------------------GIPPTALREIS 52 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhcccc----------------------------------CCchHHHHHHH
Confidence 5699999999999998 58999999865421110 00112234444
Q ss_pred HHHHHHHhcCCCC-ceeeceeeeccCC----CeEEEEeecCCCchhhhhhhhh----cCCCHHHHHHHH--HHHHHHHHH
Q 004334 377 NAELFASNFKDMD-YVKVPTIFWEYTT----PQILTMEYVPGIKINRIQSLDE----LGVDRKRLGRYA--VESYLEQIL 445 (760)
Q Consensus 377 nl~~f~~~~~~~~-~V~VP~vy~e~st----~~vLVME~ieG~~L~d~~~l~~----~g~d~~~la~~l--v~~~L~qI~ 445 (760)
.+..+. +++ -+.+..++..... ..+++|||++| .+.++..... ..++...+...+ +-..+..+|
T Consensus 53 ~l~~l~----~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH 127 (295)
T cd07837 53 LLQMLS----ESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH 127 (295)
T ss_pred HHHHcc----CCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 444442 222 2233333221111 25899999998 5766543211 123333333322 223478899
Q ss_pred hCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHH
Q 004334 446 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRR 524 (760)
Q Consensus 446 ~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~ 524 (760)
..|++|+|++|.||+++. .++.++|+|||++..+......... ..+.+.+++++.... ...+...|++++..
T Consensus 128 ~~~i~H~dl~~~nil~~~-~~~~~kl~dfg~~~~~~~~~~~~~~------~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ 200 (295)
T cd07837 128 KHGVMHRDLKPQNLLVDK-QKGLLKIADLGLGRAFSIPVKSYTH------EIVTLWYRAPEVLLGSTHYSTPVDIWSVGC 200 (295)
T ss_pred HCCeeecCCChHHEEEec-CCCeEEEeecccceecCCCccccCC------cccccCCCChHHhhCCCCCCchHHHHHHHH
Confidence 999999999999999984 3678999999998876433211000 012334455554432 33466789999987
Q ss_pred HHHHHHH
Q 004334 525 TAQFFLN 531 (760)
Q Consensus 525 ~~~~~l~ 531 (760)
.+.+++.
T Consensus 201 ~l~~l~~ 207 (295)
T cd07837 201 IFAEMSR 207 (295)
T ss_pred HHHHHHc
Confidence 7766543
No 319
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.27 E-value=3e-11 Score=128.06 Aligned_cols=185 Identities=15% Similarity=0.072 Sum_probs=116.3
Q ss_pred cccccccccEEEEEEE-------CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-------~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
..||.|++|.||+|.. ++..|++|....... .....+
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~------------------------------------~~~~~~ 54 (291)
T cd05094 11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL------------------------------------AARKDF 54 (291)
T ss_pred eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH------------------------------------HHHHHH
Confidence 5799999999999985 245688887643211 001123
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhc---------------CCCHHHHHHHH
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL---------------GVDRKRLGRYA 436 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~---------------g~d~~~la~~l 436 (760)
.+|+..+.++ . ++++.-..-+.......++||||++|.+|.++...... ..+...+...+
T Consensus 55 ~~e~~~l~~l----~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 129 (291)
T cd05094 55 QREAELLTNL----Q-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 129 (291)
T ss_pred HHHHHHHhcC----C-CCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHH
Confidence 4455555544 2 23322222223345667999999999999987643211 12222222222
Q ss_pred --HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC
Q 004334 437 --VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV 514 (760)
Q Consensus 437 --v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~ 514 (760)
+-..+..+|..|++|+|++|.||++++ ++.++|+|||++..+......... ....+...+++++.......+
T Consensus 130 ~~i~~al~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~dfg~a~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~ 203 (291)
T cd05094 130 SQIASGMVYLASQHFVHRDLATRNCLVGA--NLLVKIGDFGMSRDVYSTDYYRVG----GHTMLPIRWMPPESIMYRKFT 203 (291)
T ss_pred HHHHHHHHHHHhCCeeecccCcceEEEcc--CCcEEECCCCcccccCCCceeecC----CCCCcceeecChHHhccCCCC
Confidence 223367889999999999999999986 789999999998765443211100 111123456777776666667
Q ss_pred CCCChHHHHHHHHHHH
Q 004334 515 PTGDTTAVRRTAQFFL 530 (760)
Q Consensus 515 ~~~D~~al~~~~~~~l 530 (760)
+..|++++.-.+.+++
T Consensus 204 ~~~Di~slG~il~el~ 219 (291)
T cd05094 204 TESDVWSFGVILWEIF 219 (291)
T ss_pred chhhHHHHHHHHHHHH
Confidence 7889999987776654
No 320
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.27 E-value=2.8e-11 Score=144.39 Aligned_cols=142 Identities=20% Similarity=0.239 Sum_probs=92.7
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||+.+..-... ......+..|..
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~---------------------------------~~~~~~~~~E~~ 56 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMIN---------------------------------KNMVHQVQAERD 56 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehhhccC---------------------------------HHHHHHHHHHHH
Confidence 6899999999999999 49999999976421000 011112334444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHH---HHHHHHHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~---la~~lv~~~L~qI~~~GffHaD 453 (760)
.+..+ .+...+.+... .......+|||||++|++|.++..... .++... ++..+ -..+..+|..|++|+|
T Consensus 57 ~l~~l----~hp~Iv~~~~~-~~~~~~~~lVmEy~~g~~L~~li~~~~-~l~~~~~~~i~~qi-l~aL~yLH~~gIiHrD 129 (669)
T cd05610 57 ALALS----KSPFIVHLYYS-LQSANNVYLVMEYLIGGDVKSLLHIYG-YFDEEMAVKYISEV-ALALDYLHRHGIIHRD 129 (669)
T ss_pred HHHhc----CCCCcCeEEEE-EEECCEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHH-HHHHHHHHhCCEEeCC
Confidence 44333 22212222222 233456799999999999998764221 122222 22222 2347889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccCh
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISP 482 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~ 482 (760)
+||.|||++. ++.++|+|||++.....
T Consensus 130 LKP~NILl~~--~g~vkL~DFGls~~~~~ 156 (669)
T cd05610 130 LKPDNMLISN--EGHIKLTDFGLSKVTLN 156 (669)
T ss_pred ccHHHEEEcC--CCCEEEEeCCCCccccC
Confidence 9999999985 78999999999986543
No 321
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.27 E-value=2.7e-11 Score=126.66 Aligned_cols=187 Identities=18% Similarity=0.185 Sum_probs=114.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|+|++|+||+|+. +|+.||||+.+..... ++....+.+|..
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~----------------------------------~~~~~~~~~e~~ 50 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEK----------------------------------EGFPITAIREIK 50 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEeccccc----------------------------------ccchHHHHHHHH
Confidence 4689999999999998 4899999998763200 011122334555
Q ss_pred HHHHHHHhcCCCCceeeceeeecc-CCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~-st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
.+.++. +..-+.+..++... ....+++|||+++ ++.++........+...+...+ +-..+..+|..|++|+|
T Consensus 51 ~l~~l~----~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~d 125 (287)
T cd07840 51 LLQKLR----HPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRD 125 (287)
T ss_pred HHHhcc----CCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence 555442 22223333333322 2568999999987 6766543322234433332222 22336789999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~-lG~~~~~~D~~al~~~~~~~l~ 531 (760)
++|.||++++ ++.++++|||++..+.......... ...+..+++++... ....++..|+++++-.+.+++.
T Consensus 126 l~p~nil~~~--~~~~~l~d~g~~~~~~~~~~~~~~~-----~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t 197 (287)
T cd07840 126 IKGSNILINN--DGVLKLADFGLARPYTKRNSADYTN-----RVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFL 197 (287)
T ss_pred CcHHHeEEcC--CCCEEEccccceeeccCCCcccccc-----cccccccCCceeeEccccCChHHHHHHHHHHHHHHHh
Confidence 9999999986 8899999999998876543211110 01123344444322 2234566789988877666543
No 322
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.26 E-value=5.7e-11 Score=126.43 Aligned_cols=183 Identities=14% Similarity=0.130 Sum_probs=112.9
Q ss_pred cccccccccEEEEEEE--CCe--eEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGE--EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~--~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E 374 (760)
+.||.|++|+||+|++ +|. .|++|..+...... ....+.+|
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------~~~~~~~E 52 (297)
T cd05089 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASEN-----------------------------------DHRDFAGE 52 (297)
T ss_pred eeecCCCcceEEEEEecCCCCcceeEEEEccccCCHH-----------------------------------HHHHHHHH
Confidence 5799999999999998 343 47888654311110 11223455
Q ss_pred HHHHHHHHHhcCCCCc-eeeceeeeccCCCeEEEEeecCCCchhhhhhhhh---------------cCCCHHHHHHHH--
Q 004334 375 AANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRKRLGRYA-- 436 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~-V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~---------------~g~d~~~la~~l-- 436 (760)
...+.++. ++++ +.+...+ ......+++|||+++++|.++..... .......+...+
T Consensus 53 ~~~l~~l~----~hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 127 (297)
T cd05089 53 LEVLCKLG----HHPNIINLLGAC-ENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASD 127 (297)
T ss_pred HHHHHhhc----CCCchhheEEEE-ccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHH
Confidence 55555542 2222 2222222 23345799999999999988753211 012223332222
Q ss_pred HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCC
Q 004334 437 VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPT 516 (760)
Q Consensus 437 v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~ 516 (760)
+-..+..+|..|++|+|+||.||++++ ++.++|+|||+............ ......+++++....+..+..
T Consensus 128 i~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~~~-------~~~~~~y~aPE~~~~~~~~~~ 198 (297)
T cd05089 128 VATGMQYLSEKQFIHRDLAARNVLVGE--NLASKIADFGLSRGEEVYVKKTM-------GRLPVRWMAIESLNYSVYTTK 198 (297)
T ss_pred HHHHHHHHHHCCcccCcCCcceEEECC--CCeEEECCcCCCccccceeccCC-------CCcCccccCchhhccCCCCch
Confidence 223478899999999999999999985 78999999998864332111100 011223566666666666778
Q ss_pred CChHHHHHHHHHHH
Q 004334 517 GDTTAVRRTAQFFL 530 (760)
Q Consensus 517 ~D~~al~~~~~~~l 530 (760)
.|++++.-.+.+++
T Consensus 199 ~DvwSlG~il~el~ 212 (297)
T cd05089 199 SDVWSFGVLLWEIV 212 (297)
T ss_pred hhHHHHHHHHHHHH
Confidence 89999988776654
No 323
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.26 E-value=2.9e-11 Score=126.97 Aligned_cols=185 Identities=19% Similarity=0.234 Sum_probs=112.4
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|.. +|+.||+|+........ .....+.+|.+
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~----------------------------------~~~~~~~~e~~ 52 (286)
T cd07846 7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK----------------------------------MVKKIAMREIR 52 (286)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc----------------------------------hhhHHHHHHHH
Confidence 5799999999999999 48999999753321110 00111233433
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~~GffHaDp 454 (760)
.+.++ .+..-+.+...+ ......+++|||++|..+.++.... .+.+...+...+. -..+..+|..|++|+|+
T Consensus 53 ~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l 126 (286)
T cd07846 53 MLKQL----RHENLVNLIEVF-RRKKRLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSHNIIHRDI 126 (286)
T ss_pred HHHhc----CCcchhhHHHhc-ccCCeEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence 33333 121112222222 2234579999999999888764322 2244444433322 23467889999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~l~ 531 (760)
+|.||++++ ++.++|+|||++..+...... ... ..+...+++++.... ...+...|+++++..+.+++.
T Consensus 127 ~p~ni~~~~--~~~~~l~dfg~~~~~~~~~~~-~~~-----~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~ 196 (286)
T cd07846 127 KPENILVSQ--SGVVKLCDFGFARTLAAPGEV-YTD-----YVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLT 196 (286)
T ss_pred CHHHEEECC--CCcEEEEeeeeeeeccCCccc-cCc-----ccceeeccCcHHhccccccCchHhHHHHHHHHHHHHc
Confidence 999999986 889999999999877554321 100 112333445554432 233456799999877766553
No 324
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.26 E-value=3.3e-11 Score=127.43 Aligned_cols=185 Identities=16% Similarity=0.079 Sum_probs=108.3
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.+.||.|++|.||+|.. +|+.|+||+.+....+.. .....+|+
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-----------------------------------~~~~~~e~ 54 (291)
T cd07870 10 LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGV-----------------------------------PFTAIREA 54 (291)
T ss_pred EEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCC-----------------------------------cHHHHHHH
Confidence 36799999999999998 589999998654211110 00122444
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
..+..+ .+..-+.+... .......+++|||++|. +.+.............+.... +-..+..+|..|++|+|
T Consensus 55 ~~l~~l----~h~ni~~~~~~-~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d 128 (291)
T cd07870 55 SLLKGL----KHANIVLLHDI-IHTKETLTFVFEYMHTD-LAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRD 128 (291)
T ss_pred HHHHhc----CCCCEeEEEEE-EecCCeEEEEEecccCC-HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 444444 22222222222 23344679999999764 443322222222322222221 22346789999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~l~ 531 (760)
+||.||+++. ++.++|+|||++........... ...++..+++++.... ...+...|++++...+.+++.
T Consensus 129 lkp~Nil~~~--~~~~~l~Dfg~~~~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~ 199 (291)
T cd07870 129 LKPQNLLISY--LGELKLADFGLARAKSIPSQTYS------SEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQ 199 (291)
T ss_pred CChHHEEEcC--CCcEEEeccccccccCCCCCCCC------CccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHh
Confidence 9999999985 78999999998875433221100 0012334455554432 223456799998877766553
No 325
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.26 E-value=6.4e-11 Score=125.31 Aligned_cols=186 Identities=13% Similarity=0.118 Sum_probs=114.0
Q ss_pred cccccccccEEEEEEEC-------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~-------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
+.||.|++|.||+|+.. +..|++|+...+.... + ...+
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~----------------------------------~-~~~~ 50 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSS----------------------------------E-LRDL 50 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHH----------------------------------H-HHHH
Confidence 57899999999999872 2579999876532111 0 1123
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-----------------------cCCC
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-----------------------LGVD 428 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-----------------------~g~d 428 (760)
.+|...+..+ .+..-+.+...+ ......+++|||++|++|.++..... ..++
T Consensus 51 ~~E~~~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 125 (290)
T cd05045 51 LSEFNLLKQV----NHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALT 125 (290)
T ss_pred HHHHHHHhhC----CCCCEeeEEEEE-ecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccC
Confidence 4454444444 222223333322 34466799999999999988653211 0112
Q ss_pred HHHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHH
Q 004334 429 RKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQA 506 (760)
Q Consensus 429 ~~~la~~l--v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~ 506 (760)
...+...+ +-..+..+|..|++|+|++|.||++++ ++.++|+|||++..+...... ... ........+++++
T Consensus 126 ~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~--~~~~kl~dfg~~~~~~~~~~~--~~~--~~~~~~~~y~apE 199 (290)
T cd05045 126 MGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAE--GRKMKISDFGLSRDVYEEDSY--VKR--SKGRIPVKWMAIE 199 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcC--CCcEEeccccccccccCccch--hcc--cCCCCCccccCHH
Confidence 22222222 223468899999999999999999986 789999999998776433211 000 0011223456666
Q ss_pred HHHcCCCCCCCChHHHHHHHHHHH
Q 004334 507 MVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 507 l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
...-...+...|++++...+.+++
T Consensus 200 ~~~~~~~~~~~Di~slG~~l~el~ 223 (290)
T cd05045 200 SLFDHIYTTQSDVWSFGVLLWEIV 223 (290)
T ss_pred HHccCCcchHhHHHHHHHHHHHHH
Confidence 555555667789999887766554
No 326
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.26 E-value=8.6e-11 Score=122.68 Aligned_cols=184 Identities=17% Similarity=0.156 Sum_probs=116.9
Q ss_pred cccccccccEEEEEEE-C--C--eeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-K--G--EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~--G--~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~ 373 (760)
+.+|.|++|.||+|+. + + ..|+||..+..... +..+.+.+
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~-----------------------------------~~~~~~~~ 56 (270)
T cd05056 12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSP-----------------------------------SVREKFLQ 56 (270)
T ss_pred eeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCH-----------------------------------HHHHHHHH
Confidence 6799999999999997 2 2 46888976543211 11122344
Q ss_pred HHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccc
Q 004334 374 EAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFH 451 (760)
Q Consensus 374 EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffH 451 (760)
|+..+.++ .+..-+.+..++ .....+++|||++|++|.++........+...+...+ +-..+..+|..|++|
T Consensus 57 e~~~l~~~----~h~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H 130 (270)
T cd05056 57 EAYIMRQF----DHPHIVKLIGVI--TENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVH 130 (270)
T ss_pred HHHHHHhC----CCCchhceeEEE--cCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 55555544 222223333322 2355789999999999998764333233433332222 223467899999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|++|.||+++. ++.++++|||.+..+...... .. ........+++++.......+...|++++...+.+++
T Consensus 131 ~dl~p~nili~~--~~~~~l~d~g~~~~~~~~~~~--~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 202 (270)
T cd05056 131 RDIAARNVLVSS--PDCVKLGDFGLSRYLEDESYY--KA---SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 202 (270)
T ss_pred cccChheEEEec--CCCeEEccCceeeecccccce--ec---CCCCccccccChhhhccCCCCchhhhHHHHHHHHHHH
Confidence 999999999985 789999999998877554210 00 0111233566777766666677889999987765544
No 327
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.26 E-value=4.2e-11 Score=126.75 Aligned_cols=186 Identities=16% Similarity=0.123 Sum_probs=116.8
Q ss_pred ccccccccccEEEEEEE-------CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL-------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 370 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l-------~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~ 370 (760)
.+.+|.|++|.||++.. ++..||||..+-.- ......
T Consensus 10 ~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~------------------------------------~~~~~~ 53 (288)
T cd05093 10 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS------------------------------------DNARKD 53 (288)
T ss_pred ccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC------------------------------------HHHHHH
Confidence 35799999999999985 24568888653210 011122
Q ss_pred HHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh------------cCCCHHHHHHHH--
Q 004334 371 LYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE------------LGVDRKRLGRYA-- 436 (760)
Q Consensus 371 l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~------------~g~d~~~la~~l-- 436 (760)
+.+|+..+.++ .+..-+.+... .......+++|||++|.+|.++..... ..++...+...+
T Consensus 54 ~~~e~~~l~~l----~h~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q 128 (288)
T cd05093 54 FHREAELLTNL----QHEHIVKFYGV-CVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQ 128 (288)
T ss_pred HHHHHHHHHhC----CCCCcceEEEE-EecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHH
Confidence 34455555544 22222222222 234467899999999999988653211 113333333322
Q ss_pred HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCC
Q 004334 437 VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPT 516 (760)
Q Consensus 437 v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~ 516 (760)
+-..+..+|..|++|+|++|.||++++ ++.++|+|||++..+......... .-......+++++....+..++.
T Consensus 129 l~~aL~~lH~~~i~H~dlkp~Nili~~--~~~~kl~dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~ 202 (288)
T cd05093 129 IAAGMVYLASQHFVHRDLATRNCLVGE--NLLVKIGDFGMSRDVYSTDYYRVG----GHTMLPIRWMPPESIMYRKFTTE 202 (288)
T ss_pred HHHHHHHHHhCCeeecccCcceEEEcc--CCcEEeccCCccccccCCceeecC----CCCCccccccCHHHhccCCCCch
Confidence 223367899999999999999999986 889999999998876433210000 00112345777887776667778
Q ss_pred CChHHHHHHHHHHH
Q 004334 517 GDTTAVRRTAQFFL 530 (760)
Q Consensus 517 ~D~~al~~~~~~~l 530 (760)
.|++++.-.+.+++
T Consensus 203 sDiwslG~il~~l~ 216 (288)
T cd05093 203 SDVWSLGVVLWEIF 216 (288)
T ss_pred hhHHHHHHHHHHHH
Confidence 99999987776654
No 328
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.25 E-value=8.6e-11 Score=123.18 Aligned_cols=184 Identities=17% Similarity=0.185 Sum_probs=110.5
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|+. +|+.||||+.++....... ..+..|..
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~-----------------------------------~~~~~e~~ 51 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQ-----------------------------------KRLLMDLD 51 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHH-----------------------------------HHHHHHHH
Confidence 5799999999999999 5999999987664321100 01111211
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhh---hhcCCCHHHHHHHH--HHHHHHHHHhC-Ccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL---DELGVDRKRLGRYA--VESYLEQILSH-GFF 450 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l---~~~g~d~~~la~~l--v~~~L~qI~~~-Gff 450 (760)
.+.+ ...+..-+.+...+ ......+++|||++| .+.++... ....++...+.... +-..+..+|.+ +++
T Consensus 52 ~~~~---~~~~~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~ 126 (283)
T cd06617 52 ISMR---SVDCPYTVTFYGAL-FREGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVI 126 (283)
T ss_pred HHHH---HcCCCCeeeeeEEE-ecCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCee
Confidence 1111 12222223333333 234568999999986 45554321 11223333333322 22336788987 999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC----CCCCCCChHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG----VLVPTGDTTAVRRTA 526 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG----~~~~~~D~~al~~~~ 526 (760)
|+|+||+||+++. ++.++++|||++..+....... ...+...+++++..... ..+...|+++++..+
T Consensus 127 h~dlkp~nil~~~--~~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l 197 (283)
T cd06617 127 HRDVKPSNVLINR--NGQVKLCDFGISGYLVDSVAKT-------IDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITM 197 (283)
T ss_pred cCCCCHHHEEECC--CCCEEEeecccccccccccccc-------cccCCccccChhhcCCcccccccCccccchhhHHHH
Confidence 9999999999985 7899999999988765432110 01233445666655431 225668999998877
Q ss_pred HHHHH
Q 004334 527 QFFLN 531 (760)
Q Consensus 527 ~~~l~ 531 (760)
.+++.
T Consensus 198 ~~l~~ 202 (283)
T cd06617 198 IELAT 202 (283)
T ss_pred HHHHh
Confidence 66553
No 329
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.25 E-value=4e-11 Score=128.21 Aligned_cols=186 Identities=17% Similarity=0.096 Sum_probs=114.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||+|+.+...... +......+|+.
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------~~~~~~~~E~~ 58 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD----------------------------------GIPISSLREIT 58 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC----------------------------------CCcchhhHHHH
Confidence 5799999999999998 59999999876431110 00001123444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccC-CCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYT-TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~s-t~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
.+.++ .+...+.+..++.+.. ...++||||++| ++.++.......++...+.... +-..+..+|..|++|+|
T Consensus 59 ~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d 133 (309)
T cd07845 59 LLLNL----RHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRD 133 (309)
T ss_pred HHHhC----CCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 44443 2333344444443322 456999999987 5666543222223333332222 22347889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~l~ 531 (760)
++|+||+++. ++.++|+|||++..+....... .. ......+++++...- ...+...|++++...+.+++.
T Consensus 134 l~p~nil~~~--~~~~kL~dfg~~~~~~~~~~~~-~~-----~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~ 204 (309)
T cd07845 134 LKVSNLLLTD--KGCLKIADFGLARTYGLPAKPM-TP-----KVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLA 204 (309)
T ss_pred CCHHHEEECC--CCCEEECccceeeecCCccCCC-Cc-----ccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHh
Confidence 9999999985 7899999999998775432110 00 011233555665432 334567899999887766653
No 330
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.25 E-value=7.3e-11 Score=123.31 Aligned_cols=184 Identities=18% Similarity=0.202 Sum_probs=115.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|.. +|+.|++|..++..... .....+.+|..
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~~~~~~~~e~~ 50 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESE----------------------------------GIPKTALREIK 50 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccc----------------------------------hhHHHHHHHHH
Confidence 4799999999999998 58999999876532221 00112233444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHH---HHHHHHHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~---la~~lv~~~L~qI~~~GffHaD 453 (760)
.+.++. +..-+.+...+ ......+++|||++| ++.+.........+... ++..++. .+..+|..|++|+|
T Consensus 51 ~l~~l~----~~~i~~~~~~~-~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~-~l~~LH~~~i~H~d 123 (283)
T cd05118 51 LLKELN----HPNIIKLLDVF-RHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQ-GLAFCHSHGILHRD 123 (283)
T ss_pred HHHHhc----CCCcchHHHhh-ccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHH-HHHHHHHCCeeecC
Confidence 444432 11112222222 233567999999987 66654433222333333 3333333 46889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~~~~~~l~ 531 (760)
+||.||+++. ++.++++|||.+..+....+. + ....++..++++++.... ..+...|++++...+.+++.
T Consensus 124 l~p~nili~~--~~~~~l~df~~~~~~~~~~~~-~-----~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~t 194 (283)
T cd05118 124 LKPENLLINT--EGVLKLADFGLARSFGSPVRP-Y-----THYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLS 194 (283)
T ss_pred cCHHHEEECC--CCcEEEeeeeeeEecCCCccc-c-----cCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHh
Confidence 9999999985 789999999999888665411 1 001233445556655544 55677899999877766553
No 331
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.25 E-value=6e-11 Score=121.90 Aligned_cols=183 Identities=12% Similarity=0.066 Sum_probs=116.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.++.|++|.||+++. +|+.++||+........ .....+.+|..
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~~~~~~~~e~~ 51 (256)
T cd08530 6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ----------------------------------KEREDAVNEIR 51 (256)
T ss_pred eeecCCCceeEEEEEECCCCCEEEEEEEehhhccH----------------------------------HHHHHHHHHHH
Confidence 5799999999999988 58999999865421100 00011223333
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh---hcCCCHHHHHHHH--HHHHHHHHHhCCccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD---ELGVDRKRLGRYA--VESYLEQILSHGFFH 451 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~---~~g~d~~~la~~l--v~~~L~qI~~~GffH 451 (760)
.+..+ .+..-+.+...+ ......++||||++|.+|.++.... ....+...+...+ +-..+..+|..|++|
T Consensus 52 ~l~~l----~~~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h 126 (256)
T cd08530 52 ILASV----NHPNIISYKEAF-LDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILH 126 (256)
T ss_pred HHHhC----CCCCchhhhhhh-ccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCccc
Confidence 33333 111111122222 2235679999999999998865331 1223444333332 223467899999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|++|.||++++ ++.++|+|||++..+...... ...++..++.++.......++..|++++...+.+++
T Consensus 127 ~~l~~~ni~~~~--~~~~kl~d~g~~~~~~~~~~~--------~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~ 195 (256)
T cd08530 127 RDLKSANILLVA--NDLVKIGDLGISKVLKKNMAK--------TQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMA 195 (256)
T ss_pred CCCCcceEEEec--CCcEEEeeccchhhhccCCcc--------cccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHH
Confidence 999999999986 789999999998777654111 112455667777766665667789999887766554
No 332
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.25 E-value=3.9e-11 Score=127.24 Aligned_cols=191 Identities=16% Similarity=0.129 Sum_probs=113.8
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
...||.|++|+||+|+. +|+.||||+........ .+.....+|.
T Consensus 17 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~----------------------------------~~~~~~~~e~ 62 (310)
T cd07865 17 LAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE----------------------------------GFPITALREI 62 (310)
T ss_pred EEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC----------------------------------CchhHHHHHH
Confidence 36899999999999998 58999999764321100 0001122344
Q ss_pred HHHHHHHHhcCCCCceeeceeee-------ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004334 376 ANAELFASNFKDMDYVKVPTIFW-------EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 446 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~-------e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~ 446 (760)
+.+.++ .+...+.+..++. ...+..++||||+++ .+.+........++...+...+ +-..+..+|.
T Consensus 63 ~~l~~l----~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~ 137 (310)
T cd07865 63 KILQLL----KHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHR 137 (310)
T ss_pred HHHHhC----CCCCccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 444444 2222233333322 123446999999987 5555433222234444333332 2234788999
Q ss_pred CCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC-CCCCCChHHHHHH
Q 004334 447 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV-LVPTGDTTAVRRT 525 (760)
Q Consensus 447 ~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~-~~~~~D~~al~~~ 525 (760)
+|++|+|++|.||+++. ++.++|+|||++..+....... .... ....+...++++++...+. ..+..|++++...
T Consensus 138 ~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~-~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~ 213 (310)
T cd07865 138 NKILHRDMKAANILITK--DGILKLADFGLARAFSLSKNSK-PNRY-TNRVVTLWYRPPELLLGERDYGPPIDMWGAGCI 213 (310)
T ss_pred CCeeccCCCHHHEEECC--CCcEEECcCCCcccccCCcccC-CCCc-cCcccCccccCcHHhcCCcccCchhhhHHHHHH
Confidence 99999999999999985 7899999999998775433211 0000 0011223455666554322 3567899999887
Q ss_pred HHHHHH
Q 004334 526 AQFFLN 531 (760)
Q Consensus 526 ~~~~l~ 531 (760)
+.+++.
T Consensus 214 l~el~t 219 (310)
T cd07865 214 MAEMWT 219 (310)
T ss_pred HHHHHh
Confidence 766653
No 333
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.24 E-value=8.8e-11 Score=124.34 Aligned_cols=185 Identities=17% Similarity=0.166 Sum_probs=111.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||..+..... ++....+.+|++
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----------------------------------~~~~~~~~~e~~ 53 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQED----------------------------------EGVPSTAIREIS 53 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhcccc----------------------------------ccchHHHHHHHH
Confidence 5799999999999998 5899999975431100 001112344555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh-hcCCCHHH---HHHHHHHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKR---LGRYAVESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~-~~g~d~~~---la~~lv~~~L~qI~~~GffHa 452 (760)
.+.++. +..-+.+...+ ......++||||++| .+.+..... ....+... ++..++ ..+..+|..|++|+
T Consensus 54 ~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~-~aL~~LH~~~i~H~ 126 (294)
T PLN00009 54 LLKEMQ----HGNIVRLQDVV-HSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQIL-RGIAYCHSHRVLHR 126 (294)
T ss_pred HHHhcc----CCCEeeEEEEE-ecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHH-HHHHHHHhCCeeCC
Confidence 555442 22222222222 334567999999976 555543221 11123222 222333 34788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~l~ 531 (760)
|++|.||+++. .++.++++|||++..+...... +. ...+...++.++.... .......|++++...+.+++.
T Consensus 127 dl~p~nill~~-~~~~~kl~dfg~~~~~~~~~~~-~~-----~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~t 199 (294)
T PLN00009 127 DLKPQNLLIDR-RTNALKLADFGLARAFGIPVRT-FT-----HEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVN 199 (294)
T ss_pred CCCcceEEEEC-CCCEEEEcccccccccCCCccc-cc-----cCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence 99999999984 3567999999999765432111 00 0012334556665544 334567899999877766654
No 334
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.24 E-value=6.8e-11 Score=126.39 Aligned_cols=185 Identities=12% Similarity=0.109 Sum_probs=114.4
Q ss_pred cccccccccEEEEEEE--CCe----eEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGE----EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~----~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~ 372 (760)
+.||+|++|+||+|+. +|+ .||+|+..+..... ....+.
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~ 57 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPK-----------------------------------ANVEFM 57 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHH-----------------------------------HHHHHH
Confidence 5799999999999987 454 57888766532111 001123
Q ss_pred HHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcc
Q 004334 373 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFF 450 (760)
Q Consensus 373 ~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~Gff 450 (760)
+|...+.++ .+..-+.+...+ ......++|||++++++.+.........+...+.... +...+..+|..|++
T Consensus 58 ~e~~~~~~l----~h~niv~~~~~~--~~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iv 131 (303)
T cd05110 58 DEALIMASM----DHPHLVRLLGVC--LSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV 131 (303)
T ss_pred HHHHHHHhC----CCCCcccEEEEE--cCCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCee
Confidence 444444443 222223333322 2345679999999999988754332223333322221 22347789999999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|+|+||.||+++. ++.++|+|||++..+.......-.. .......+++++.......+...|++++.-.+.+++
T Consensus 132 H~dikp~Nill~~--~~~~kL~Dfg~~~~~~~~~~~~~~~----~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~ 205 (303)
T cd05110 132 HRDLAARNVLVKS--PNHVKITDFGLARLLEGDEKEYNAD----GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 205 (303)
T ss_pred ccccccceeeecC--CCceEEccccccccccCcccccccC----CCccccccCCHHHhccCCCChHHHHHHHHHHHHHHH
Confidence 9999999999975 7889999999998775433210000 001123456666665555667789999987666554
No 335
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.24 E-value=7.7e-11 Score=122.81 Aligned_cols=194 Identities=14% Similarity=0.116 Sum_probs=116.9
Q ss_pred cccccccccEEEEEEEC---CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK---GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~---G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
+.||.|.+|.||+|.+. ++.||||..+......... .... +.....+.+|.
T Consensus 6 ~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~----------------------~~~~----~~~~~~~~~e~ 59 (269)
T cd08528 6 EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKD----------------------KRER----DKSIGDIVSEV 59 (269)
T ss_pred hhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccc----------------------cccc----hHHHHHHHHHH
Confidence 57999999999999993 6889999876532111000 0000 00011122232
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhh---hhcCCCHHHHHHHHHH--HHHHHHHh-CCc
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL---DELGVDRKRLGRYAVE--SYLEQILS-HGF 449 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l---~~~g~d~~~la~~lv~--~~L~qI~~-~Gf 449 (760)
..+. +.. +++++.-+.-+.......+++|||++|.+|.++... ....++...+...+.+ ..+..+|. .|+
T Consensus 60 ~~l~---~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i 135 (269)
T cd08528 60 TIIK---EQL-RHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRI 135 (269)
T ss_pred HHHh---hcC-CCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCce
Confidence 2222 222 233332222222334677999999999999886532 1122333333333222 23667784 689
Q ss_pred cccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004334 450 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 450 fHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~ 529 (760)
+|+|++|.||+++. ++.++|+|||++......... ....+...++.+++...+..++..|++++...+.++
T Consensus 136 ~H~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l 206 (269)
T cd08528 136 VHRDLTPNNIMLGE--DDKVTITDFGLAKQKQPESKL-------TSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQM 206 (269)
T ss_pred eecCCCHHHEEECC--CCcEEEecccceeeccccccc-------ccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHH
Confidence 99999999999985 789999999999887654310 112344456667776666667788999998776665
Q ss_pred HH
Q 004334 530 LN 531 (760)
Q Consensus 530 l~ 531 (760)
+.
T Consensus 207 ~~ 208 (269)
T cd08528 207 CT 208 (269)
T ss_pred Hh
Confidence 53
No 336
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.24 E-value=4.1e-11 Score=130.75 Aligned_cols=195 Identities=21% Similarity=0.233 Sum_probs=115.7
Q ss_pred hCCChhhhhcccC-ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchH
Q 004334 285 LGAPLDDVFERFD-VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWV 361 (760)
Q Consensus 285 lG~~~~~iF~~fd-~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~ 361 (760)
.+....++...|. ..+||+|++|+||+|+. +|+.||||+........
T Consensus 6 ~~~~~~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~------------------------------ 55 (343)
T cd07851 6 LNKTVWEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSA------------------------------ 55 (343)
T ss_pred hccceecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchh------------------------------
Confidence 3333334444443 37899999999999999 58999999875432111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeee-----ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH
Q 004334 362 AIYDECASVLYQEAANAELFASNFKDMDYVKVPTIFW-----EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA 436 (760)
Q Consensus 362 ~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~-----e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l 436 (760)
+....+.+|...+.++. +...+.+...+. ......++||||+ |.+|.++... ..++...+...+
T Consensus 56 ----~~~~~~~~E~~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~ 124 (343)
T cd07851 56 ----IHAKRTYRELRLLKHMD----HENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKC--QKLSDDHIQFLV 124 (343)
T ss_pred ----hHHHHHHHHHHHHHhcc----CCCHHHHHHHhhccccccccccEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHH
Confidence 00011122322222221 111111111111 1223479999999 5578776533 223433333322
Q ss_pred --HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CC
Q 004334 437 --VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VL 513 (760)
Q Consensus 437 --v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~ 513 (760)
+-..+..+|..|++|+|++|.||++++ ++.++|+|||++..+...... ..+...+++++....+ ..
T Consensus 125 ~ql~~aL~~LH~~gi~H~dlkp~Nill~~--~~~~kL~dfg~~~~~~~~~~~---------~~~~~~y~aPE~~~~~~~~ 193 (343)
T cd07851 125 YQILRGLKYIHSAGIIHRDLKPSNIAVNE--DCELKILDFGLARHTDDEMTG---------YVATRWYRAPEIMLNWMHY 193 (343)
T ss_pred HHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCEEEccccccccccccccC---------CcccccccCHHHHhCCCCC
Confidence 223467899999999999999999986 889999999999877543211 1123345566655432 34
Q ss_pred CCCCChHHHHHHHHHHHH
Q 004334 514 VPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 514 ~~~~D~~al~~~~~~~l~ 531 (760)
+...|+++++-.+.+++.
T Consensus 194 ~~~~DvwslGv~l~ellt 211 (343)
T cd07851 194 NQTVDIWSVGCIMAELLT 211 (343)
T ss_pred CchHhHHHHHHHHHHHHh
Confidence 567899999877766654
No 337
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.24 E-value=1.3e-11 Score=126.36 Aligned_cols=191 Identities=20% Similarity=0.185 Sum_probs=122.8
Q ss_pred cccCc-cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHH
Q 004334 294 ERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 370 (760)
Q Consensus 294 ~~fd~-~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~ 370 (760)
++|+- .|+|-|-||+||.|+. ++--||+||.... ++. ......+
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKs---qi~------------------------------~~~v~~q 68 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKS---QIL------------------------------KTQVEHQ 68 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHH---HHH------------------------------Hhcchhh
Confidence 35663 8999999999999999 4889999986431 000 0112223
Q ss_pred HHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHH--HHHHHHHHHHhC
Q 004334 371 LYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRY--AVESYLEQILSH 447 (760)
Q Consensus 371 l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~--lv~~~L~qI~~~ 447 (760)
+++|.... .++.+ |++---.-|.....+.+|++||..++.+........ ..++...-+.. .+...+..+|..
T Consensus 69 lrREiEIq----s~L~h-pnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k 143 (281)
T KOG0580|consen 69 LRREIEIQ----SHLRH-PNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK 143 (281)
T ss_pred hhheeEee----cccCC-ccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC
Confidence 34442111 11111 111111111223456699999999888776443212 12332222222 233346778999
Q ss_pred CccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004334 448 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 527 (760)
Q Consensus 448 GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~ 527 (760)
+++|||+||.|+|+.. +|.+++.|||-...-+...|..+ .+..+++.+++.+--..+..+|.+.++...+
T Consensus 144 ~VIhRdiKpenlLlg~--~~~lkiAdfGwsV~~p~~kR~tl--------cgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~y 213 (281)
T KOG0580|consen 144 RVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSNKRKTL--------CGTLDYLPPEMVEGRGHDKFVDLWSLGVLCY 213 (281)
T ss_pred CcccCCCCHHHhccCC--CCCeeccCCCceeecCCCCceee--------ecccccCCHhhcCCCCccchhhHHHHHHHHH
Confidence 9999999999999986 89999999999888776666544 4566778888888777777889999988777
Q ss_pred HHHHH
Q 004334 528 FFLNS 532 (760)
Q Consensus 528 ~~l~~ 532 (760)
+|+-.
T Consensus 214 eflvg 218 (281)
T KOG0580|consen 214 EFLVG 218 (281)
T ss_pred HHHhc
Confidence 76643
No 338
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.24 E-value=7.3e-11 Score=143.53 Aligned_cols=189 Identities=13% Similarity=0.027 Sum_probs=120.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..||.|+||.||+|+. .++.||+|+....... ......+..|+.
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~----------------------------------e~~~~~~~~EI~ 64 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK----------------------------------EREKSQLVIEVN 64 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEeccccC----------------------------------HHHHHHHHHHHH
Confidence 6899999999999999 5889999987642110 011123445666
Q ss_pred HHHHHHHhcCCCCceeeceeeecc-CCCeEEEEeecCCCchhhhhhhh---hcCCCHHHHHHHH--HHHHHHHHHhC---
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLD---ELGVDRKRLGRYA--VESYLEQILSH--- 447 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~-st~~vLVME~ieG~~L~d~~~l~---~~g~d~~~la~~l--v~~~L~qI~~~--- 447 (760)
.+.++. +...|.+...+... ....+|||||++|++|.+++... ...++...+...+ +-..|..+|..
T Consensus 65 IL~~L~----HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~ 140 (1021)
T PTZ00266 65 VMRELK----HKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDG 140 (1021)
T ss_pred HHHHcC----CCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccc
Confidence 565552 22223333333222 23468999999999998865321 1224444333322 22336778874
Q ss_pred ----CccccCCCCCcEEEecc---------------CCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH
Q 004334 448 ----GFFHADPHPGNIAVDDV---------------NGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV 508 (760)
Q Consensus 448 ----GffHaDpHPGNILV~~~---------------~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~ 508 (760)
+|+|+|+||.|||+... ..+.++|+|||++..+...... ....+++.+++++++
T Consensus 141 ~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~-------~s~vGTp~YmAPEvL 213 (1021)
T PTZ00266 141 PNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMA-------HSCVGTPYYWSPELL 213 (1021)
T ss_pred cccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccccc-------cccCCCccccCHHHH
Confidence 59999999999999631 1235899999999876543211 122467788888877
Q ss_pred Hc--CCCCCCCChHHHHHHHHHHHHH
Q 004334 509 QM--GVLVPTGDTTAVRRTAQFFLNS 532 (760)
Q Consensus 509 ~l--G~~~~~~D~~al~~~~~~~l~~ 532 (760)
.- ...++..|+++|.-.+.+++..
T Consensus 214 ~ge~~~~s~KSDVWSLG~ILYELLTG 239 (1021)
T PTZ00266 214 LHETKSYDDKSDMWALGCIIYELCSG 239 (1021)
T ss_pred hccCCCCCchhHHHHHHHHHHHHHHC
Confidence 42 3356778999999888877653
No 339
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.23 E-value=9.4e-11 Score=123.90 Aligned_cols=187 Identities=17% Similarity=0.156 Sum_probs=116.1
Q ss_pred cccccccccEEEEEEEC-------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~-------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
+.||.|++|.||+|... ...||+|+.+.+.... + ...+
T Consensus 18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~----------------------------------~-~~~~ 62 (293)
T cd05053 18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEK----------------------------------D-LSDL 62 (293)
T ss_pred eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHH----------------------------------H-HHHH
Confidence 68999999999999972 2679999876532211 0 0112
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh---------------cCCCHHHHHHHH
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRKRLGRYA 436 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~---------------~g~d~~~la~~l 436 (760)
.+|+..+.++. .+..-+.+..++ ......+++|||++|++|.++..... ..++...+...+
T Consensus 63 ~~E~~~l~~l~---~h~~i~~~~~~~-~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 138 (293)
T cd05053 63 VSEMEMMKMIG---KHKNIINLLGVC-TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFA 138 (293)
T ss_pred HHHHHHHHhhc---CCCCeeeEEEEE-cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHH
Confidence 34444444431 122223333333 33456799999999999988753211 112222222222
Q ss_pred --HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC
Q 004334 437 --VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV 514 (760)
Q Consensus 437 --v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~ 514 (760)
+-..+..+|..|++|+|++|.||++++ ++.++|+|||.+..+......... ........+++++....+..+
T Consensus 139 ~qi~~al~~LH~~~ivH~dlkp~Nil~~~--~~~~kL~Dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~ 212 (293)
T cd05053 139 YQVARGMEFLASKKCIHRDLAARNVLVTE--DHVMKIADFGLARDIHHIDYYRKT----TNGRLPVKWMAPEALFDRVYT 212 (293)
T ss_pred HHHHHHHHHHHHCCccccccceeeEEEcC--CCeEEeCccccccccccccceecc----CCCCCCccccCHHHhccCCcC
Confidence 223468899999999999999999986 889999999999876543210000 000112345667766666667
Q ss_pred CCCChHHHHHHHHHHH
Q 004334 515 PTGDTTAVRRTAQFFL 530 (760)
Q Consensus 515 ~~~D~~al~~~~~~~l 530 (760)
...|++++.-.+.+++
T Consensus 213 ~~~Di~slG~il~el~ 228 (293)
T cd05053 213 HQSDVWSFGVLLWEIF 228 (293)
T ss_pred cccceeehhhHHHHHh
Confidence 7889999987766543
No 340
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.23 E-value=2.3e-11 Score=127.79 Aligned_cols=185 Identities=17% Similarity=0.173 Sum_probs=111.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
++||.|++|+||+|+. +|+.||||..+...... +....+.+|++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~~~~~~~~E~~ 51 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE----------------------------------GVPSTAIREIS 51 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEcccccccc----------------------------------ccchHHHHHHH
Confidence 6899999999999998 58999999765421100 00112344555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh-hcCCCHHHHHHHHH--HHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAV--ESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~-~~g~d~~~la~~lv--~~~L~qI~~~GffHaD 453 (760)
.+.++. +..-+.+...+ ......+++|||+++ ++.++.... ...++...+..... -..+..+|..|++|+|
T Consensus 52 ~l~~l~----h~~i~~~~~~~-~~~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~ 125 (284)
T cd07860 52 LLKELN----HPNIVKLLDVI-HTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 125 (284)
T ss_pred HHHhcC----CCCCcchhhhc-ccCCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 555542 22222222222 234567999999975 666654322 22344444333322 2346889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~l~ 531 (760)
++|+||++++ ++.++++|||.+..+......... ......+++++.... ...+...|++++...+.+++.
T Consensus 126 l~p~nill~~--~~~~~l~dfg~~~~~~~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~t 196 (284)
T cd07860 126 LKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTH------EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 196 (284)
T ss_pred CCHHHEEECC--CCCEEEeeccchhhcccCcccccc------ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHH
Confidence 9999999986 889999999998766433211000 011233444543322 223456799998877766653
No 341
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.23 E-value=1.7e-10 Score=115.67 Aligned_cols=185 Identities=20% Similarity=0.164 Sum_probs=114.4
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
++|++|++|+||++.+ +|+.|+||+.+..... +....+.+|..
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-----------------------------------~~~~~~~~e~~ 49 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-----------------------------------KQREEFLREIR 49 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-----------------------------------HHHHHHHHHHH
Confidence 6899999999999999 3799999997764221 01122344555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~~GffHaDp 454 (760)
.+.++ . ++++.-...+....+..+++|||++|.+|.++........+...+..... -..+..+|..|++|+|+
T Consensus 50 ~~~~~----~-~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di 124 (225)
T smart00221 50 ILKKL----K-HPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDL 124 (225)
T ss_pred HHHhC----C-CCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 55544 1 12211111122334678999999999999887543221133333333222 22367789999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH-HcCCCCCCCChHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV-QMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~-~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|.||++++ ++.++|+|||....+....-... .........+.+++. .....++..|++++...+.+++
T Consensus 125 ~~~ni~v~~--~~~~~l~d~g~~~~~~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~ 194 (225)
T smart00221 125 KPENILLGM--DGLVKLADFGLARFIHRDLAALL-----KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELL 194 (225)
T ss_pred CHHHEEEcC--CCCEEEeeCceeeEecCcccccc-----cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHH
Confidence 999999986 68999999999988765430000 001122334445544 3334445678888876555443
No 342
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.22 E-value=9.4e-11 Score=118.01 Aligned_cols=174 Identities=21% Similarity=0.221 Sum_probs=113.2
Q ss_pred cccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHHHHHH
Q 004334 305 SLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANAELFA 382 (760)
Q Consensus 305 SiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl~~f~ 382 (760)
++|+||+|+. +|+.|++|+.+.+....- ...+.+|++.+.++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----------------------------------~~~~~~e~~~~~~l- 44 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-----------------------------------RERILREISILKKL- 44 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-----------------------------------HHHHHHHHHHHHhC-
Confidence 5899999999 479999999876432110 11233444444443
Q ss_pred HhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCccccCCCCCc
Q 004334 383 SNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGFFHADPHPGN 458 (760)
Q Consensus 383 ~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~~GffHaDpHPGN 458 (760)
++++ +++++. ......+++|||++|.+|.++...... .+...+...+. -..+..+|..|++|+|++|.|
T Consensus 45 ----~~~~--i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~n 117 (244)
T smart00220 45 ----KHPN--IVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGR-LSEDEARFYARQILSALEYLHSNGIIHRDLKPEN 117 (244)
T ss_pred ----CCCc--HHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHH
Confidence 1111 121111 122567999999999999886543221 34443333322 234678899999999999999
Q ss_pred EEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 459 IAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 459 ILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|++++ ++.++++|||.+..+..... .....+.+.++.++....+..++..|++++...+.+++
T Consensus 118 i~~~~--~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~ 180 (244)
T smart00220 118 ILLDE--DGHVKLADFGLARQLDPGGL-------LTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELL 180 (244)
T ss_pred eEECC--CCcEEEccccceeeeccccc-------cccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 99986 68999999999998876431 11123455566677766666677889999887665544
No 343
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.22 E-value=7.3e-11 Score=125.08 Aligned_cols=187 Identities=16% Similarity=0.127 Sum_probs=111.0
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|.|++|+||+|+. +|+.||||+.+...... .....+.+|..
T Consensus 13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~----------------------------------~~~~~~~~e~~ 58 (302)
T cd07864 13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE----------------------------------GFPITAIREIK 58 (302)
T ss_pred eeecccCCEEEEEEEECCCCcEEEEEEEeeccccc----------------------------------CchHHHHHHHH
Confidence 6899999999999999 58999999876532110 00011223444
Q ss_pred HHHHHHHhcCCCCceeeceeeec---------cCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHH
Q 004334 377 NAELFASNFKDMDYVKVPTIFWE---------YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQIL 445 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e---------~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~ 445 (760)
.+.++ .+..-+.+..++.+ ..+..+|+|||++| .+.+.........+...+...+. -..+..+|
T Consensus 59 ~~~~l----~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH 133 (302)
T cd07864 59 ILRQL----NHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH 133 (302)
T ss_pred HHHhC----CCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 44433 12222222222211 12357899999998 44443322222344443333322 23367899
Q ss_pred hCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHH
Q 004334 446 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRR 524 (760)
Q Consensus 446 ~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~ 524 (760)
..|++|+|++|+||++++ ++.++|+|||.+..+.......+.. ......+++++.... ...++..|++++..
T Consensus 134 ~~~i~H~dl~p~nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~-----~~~~~~y~~PE~~~~~~~~~~~~Di~slG~ 206 (302)
T cd07864 134 KKNFLHRDIKCSNILLNN--KGQIKLADFGLARLYNSEESRPYTN-----KVITLWYRPPELLLGEERYGPAIDVWSCGC 206 (302)
T ss_pred hCCeecCCCCHHHEEECC--CCcEEeCcccccccccCCccccccc-----ceeccCccChHHhcCCCCCCchhHHHHHHH
Confidence 999999999999999985 7899999999998775543211100 011223445554432 23456789999887
Q ss_pred HHHHHHH
Q 004334 525 TAQFFLN 531 (760)
Q Consensus 525 ~~~~~l~ 531 (760)
.+.+++.
T Consensus 207 ~~~el~~ 213 (302)
T cd07864 207 ILGELFT 213 (302)
T ss_pred HHHHHHh
Confidence 7665543
No 344
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.22 E-value=1.1e-10 Score=120.16 Aligned_cols=186 Identities=15% Similarity=0.119 Sum_probs=118.0
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
++++.|++|.||++.. +|..||+|.....-... .....+.+|+.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~~~~~~~~E~~ 51 (257)
T cd08225 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV----------------------------------KEKEASKKEVI 51 (257)
T ss_pred EEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc----------------------------------hhhHHHHHHHH
Confidence 6899999999999999 58999999754310000 00112344555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
.++++. +..-+.+...+ ......+++|||++|.+|.++..... ...+...+.... +...+..+|..|++|+|
T Consensus 52 ~l~~~~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~d 126 (257)
T cd08225 52 LLAKMK----HPNIVTFFASF-QENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRD 126 (257)
T ss_pred HHHhCC----CCChhhhhhee-ccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 555442 21112222222 23456799999999999988654322 123333332222 22346788999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
++|.||++++ .+..++++|||.+..+....... ....+...+++++....+..+...|++++...+.+++
T Consensus 127 l~~~nil~~~-~~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~ 196 (257)
T cd08225 127 IKSQNIFLSK-NGMVAKLGDFGIARQLNDSMELA------YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELC 196 (257)
T ss_pred CCHHHEEEcC-CCCeEEecccccchhccCCcccc------cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHH
Confidence 9999999985 23457999999988775432211 1123556677777776666777889999987765554
No 345
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.22 E-value=1.5e-10 Score=125.48 Aligned_cols=185 Identities=15% Similarity=0.090 Sum_probs=114.1
Q ss_pred cccccccccEEEEEEEC---------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK---------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECAS 369 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~---------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~ 369 (760)
++||.|++|+||+|+.. +..||+|+.+..... +...
T Consensus 18 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~-----------------------------------~~~~ 62 (334)
T cd05100 18 KPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATD-----------------------------------KDLS 62 (334)
T ss_pred ceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCH-----------------------------------HHHH
Confidence 68999999999999851 236999976542111 1111
Q ss_pred HHHHHHHHHHHHHHhcCCCCc-eeeceeeeccCCCeEEEEeecCCCchhhhhhhhh---------------cCCCHHH--
Q 004334 370 VLYQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRKR-- 431 (760)
Q Consensus 370 ~l~~EA~nl~~f~~~~~~~~~-V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~---------------~g~d~~~-- 431 (760)
.+.+|...+.++. ++++ +.+...+ ......+++|||++|++|.++..... .......
T Consensus 63 ~~~~E~~~l~~l~----~h~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 137 (334)
T cd05100 63 DLVSEMEMMKMIG----KHKNIINLLGAC-TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLV 137 (334)
T ss_pred HHHHHHHHHHhhc----CCCCeeeeeEEE-ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHH
Confidence 2344555555442 2222 2222222 22346799999999999988754221 0122222
Q ss_pred -HHHHHHHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc
Q 004334 432 -LGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM 510 (760)
Q Consensus 432 -la~~lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l 510 (760)
++..++ ..+..+|..|++|+|++|.||++++ ++.++|+|||.+..+......... ........+++++....
T Consensus 138 ~~~~qi~-~al~~LH~~givH~dlkp~Nill~~--~~~~kL~Dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~ 210 (334)
T cd05100 138 SCAYQVA-RGMEYLASQKCIHRDLAARNVLVTE--DNVMKIADFGLARDVHNIDYYKKT----TNGRLPVKWMAPEALFD 210 (334)
T ss_pred HHHHHHH-HHHHHHHHCCeeccccccceEEEcC--CCcEEECCcccceecccccccccc----cCCCcCceEcCHHHhcc
Confidence 222222 3467899999999999999999985 789999999998876542211000 00011234667776665
Q ss_pred CCCCCCCChHHHHHHHHHHH
Q 004334 511 GVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 511 G~~~~~~D~~al~~~~~~~l 530 (760)
+..+...|++++.-.+.+++
T Consensus 211 ~~~~~~~Di~slG~il~el~ 230 (334)
T cd05100 211 RVYTHQSDVWSFGVLLWEIF 230 (334)
T ss_pred CCcCchhhhHHHHHHHHHHH
Confidence 66667789999987766554
No 346
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.22 E-value=1.5e-10 Score=135.99 Aligned_cols=186 Identities=14% Similarity=0.118 Sum_probs=117.1
Q ss_pred cccccccccEEEEEEE-C-CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-K-GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~-G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+-||.|+||+||.|.+ . |.+||+|.+.-.-+ +-.+.+.+|..
T Consensus 43 ~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de------------------------------------~~L~~v~~EI~ 86 (738)
T KOG1989|consen 43 KVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDE------------------------------------EALNAVKREID 86 (738)
T ss_pred EEEccCCcEEEEEEEecCCCceeeeeeeecCCH------------------------------------HHHHHHHHHHH
Confidence 5799999999999999 4 49999996543211 01122345555
Q ss_pred HHHHHHHhcCCCCceeeceeee-----ccC----CCeEEEEeecCCCchhhhhhh-hhcCCCHHHHHHHHHHHH--HHHH
Q 004334 377 NAELFASNFKDMDYVKVPTIFW-----EYT----TPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVESY--LEQI 444 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~-----e~s----t~~vLVME~ieG~~L~d~~~l-~~~g~d~~~la~~lv~~~--L~qI 444 (760)
.|+++. ++++|. ..|. ..+ -+..|.||||.|+.|-|+... .+.++...++.+.+.+.+ +..|
T Consensus 87 ~MK~L~----gh~nIV--~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~m 160 (738)
T KOG1989|consen 87 IMKLLS----GHKNIV--SYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAM 160 (738)
T ss_pred HHHHhc----CCCcee--eEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHH
Confidence 565553 333321 1111 001 234799999999999987642 233466677766654443 6778
Q ss_pred HhCC--ccccCCCCCcEEEeccCCCcEEEEeecceeccC--hhhHHHHHHHHHHHhhc-CH----HHHHHHHHHcCCCCC
Q 004334 445 LSHG--FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS--PNIREGLLEAFYGIYEK-DA----DKVLQAMVQMGVLVP 515 (760)
Q Consensus 445 ~~~G--ffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~--~~~r~~l~~l~~al~~~-D~----~~v~~~l~~lG~~~~ 515 (760)
|... ++|||||-+|||+.. +|..+|||||.+.... ++......-+=.-+... ++ ..|++.+..++ +.+
T Consensus 161 H~~~pPiIHRDLKiENvLls~--~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~p-I~e 237 (738)
T KOG1989|consen 161 HYLKPPIIHRDLKIENVLLSA--DGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLP-IGE 237 (738)
T ss_pred hcCCCccchhhhhhhheEEcC--CCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCC-Ccc
Confidence 8877 999999999999986 8899999999986542 22222221111111111 22 23444444444 477
Q ss_pred CCChHHHHHHHHHH
Q 004334 516 TGDTTAVRRTAQFF 529 (760)
Q Consensus 516 ~~D~~al~~~~~~~ 529 (760)
+.|+||++-.++.+
T Consensus 238 KsDIWALGclLYkL 251 (738)
T KOG1989|consen 238 KSDIWALGCLLYKL 251 (738)
T ss_pred hhHHHHHHHHHHHH
Confidence 89999999877655
No 347
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.22 E-value=1.1e-10 Score=123.10 Aligned_cols=185 Identities=16% Similarity=0.106 Sum_probs=114.0
Q ss_pred cccccccccEEEEEEE-------CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-------~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
..+|.|++|.||++.. ++..|++|...... .. ....+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~-----------------------------------~~~~~ 54 (280)
T cd05092 11 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ES-----------------------------------ARQDF 54 (280)
T ss_pred cccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC-HH-----------------------------------HHHHH
Confidence 5799999999999974 35688898644311 00 01123
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhc--------------CCCHHHHHHHH-
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL--------------GVDRKRLGRYA- 436 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~--------------g~d~~~la~~l- 436 (760)
.+|.+.+.++ .+..-+.+.. +.......+++|||++|++|.++...... .++...+...+
T Consensus 55 ~~e~~~l~~l----~h~~i~~~~~-~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 129 (280)
T cd05092 55 QREAELLTVL----QHQHIVRFYG-VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIAS 129 (280)
T ss_pred HHHHHHHhcC----CCCCCceEEE-EEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHH
Confidence 3444444443 2222222222 22334567999999999999887542211 12223332222
Q ss_pred -HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCC
Q 004334 437 -VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVP 515 (760)
Q Consensus 437 -v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~ 515 (760)
+-..+..+|..|++|+|++|.||++++ ++.++|.|||++..+......... ........+++++....+..+.
T Consensus 130 qi~~al~~LH~~~i~H~dlkp~nil~~~--~~~~kL~dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~ 203 (280)
T cd05092 130 QIASGMVYLASLHFVHRDLATRNCLVGQ--GLVVKIGDFGMSRDIYSTDYYRVG----GRTMLPIRWMPPESILYRKFTT 203 (280)
T ss_pred HHHHHHHHHHHCCeecccccHhhEEEcC--CCCEEECCCCceeEcCCCceeecC----CCccccccccCHHHhccCCcCc
Confidence 223367889999999999999999985 789999999998766433211100 0011134566777766666677
Q ss_pred CCChHHHHHHHHHHH
Q 004334 516 TGDTTAVRRTAQFFL 530 (760)
Q Consensus 516 ~~D~~al~~~~~~~l 530 (760)
..|++++.-.+.+++
T Consensus 204 ~~Di~slG~il~el~ 218 (280)
T cd05092 204 ESDIWSFGVVLWEIF 218 (280)
T ss_pred hhhHHHHHHHHHHHH
Confidence 789999987766654
No 348
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.22 E-value=2.2e-11 Score=135.62 Aligned_cols=186 Identities=13% Similarity=0.110 Sum_probs=133.7
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|.|+||-++..++ ++..+|+|..+-.- ..+...+...+|..
T Consensus 10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~----------------------------------~t~~~r~~A~~E~~ 55 (426)
T KOG0589|consen 10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEK----------------------------------LTEPERRSAIQEMD 55 (426)
T ss_pred hhcCccccchhhhhhhccCCceEEEEEEeccc----------------------------------cCchhhHHHHHHHH
Confidence 5699999999988887 57899999654310 00111223345555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHHHHHH--HHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVESY--LEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~lv~~~--L~qI~~~GffHaD 453 (760)
-+.++ .+..-|..+..+.+-..-.+|||+|++|+++.+...-.+ .-++.+++....++.. +..+|+..++|+|
T Consensus 56 lis~~----~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRD 131 (426)
T KOG0589|consen 56 LLSKL----LHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRD 131 (426)
T ss_pred HHHhc----cCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence 55543 344445566555443333899999999999999664333 4456677777666544 6779999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|+.|||++. ++.|+|-|||+++.+.++.- + ..-+-+++.++.+++.+---.....|+++++=.++++.
T Consensus 132 lK~~Nifltk--~~~VkLgDfGlaK~l~~~~~--~----a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~ 200 (426)
T KOG0589|consen 132 LKCANIFLTK--DKKVKLGDFGLAKILNPEDS--L----ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMC 200 (426)
T ss_pred chhhhhhccc--cCceeecchhhhhhcCCchh--h----hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHH
Confidence 9999999986 88899999999999988751 2 23346899999999988666667889999986666543
No 349
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.21 E-value=9e-11 Score=122.57 Aligned_cols=185 Identities=18% Similarity=0.145 Sum_probs=113.5
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||+|.+|.||+|+. +|+.|++|+......+. .+...+..|..
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~----------------------------------~~~~~~~~e~~ 50 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEE----------------------------------GIPSTALREIS 50 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccccc----------------------------------cccHHHHHHHH
Confidence 4689999999999999 48999999987643110 00011122323
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDp 454 (760)
.+.++. +...+.+...+ ......+++|||+++ +|.++........+...+...+ +-..+..+|..|++|+|+
T Consensus 51 ~l~~~~----~~~i~~~~~~~-~~~~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l 124 (282)
T cd07829 51 LLKELK----HPNIVKLLDVI-HTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDL 124 (282)
T ss_pred HHHhcC----CCCHHHHHhhh-hcCCceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 233221 11111222222 122567999999986 7887654332234433333322 223468899999999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~~~~~~l~ 531 (760)
+|.||++++ ++.++|.|||.+.......... . ....+..++++++...+ ..++..|++++.-.+.+++.
T Consensus 125 ~~~ni~~~~--~~~~~l~d~g~~~~~~~~~~~~-~-----~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~ 194 (282)
T cd07829 125 KPQNILINR--DGVLKLADFGLARAFGIPLRTY-T-----HEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMIT 194 (282)
T ss_pred ChheEEEcC--CCCEEEecCCcccccCCCcccc-C-----ccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHh
Confidence 999999986 7899999999988765443211 0 01123334556655444 56677899999877766553
No 350
>PRK10345 hypothetical protein; Provisional
Probab=99.21 E-value=1.1e-10 Score=120.20 Aligned_cols=142 Identities=10% Similarity=0.105 Sum_probs=92.5
Q ss_pred ccccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.++||+|++|.||.-..++.. +||+.+++-.. ..+.+.+|.+.
T Consensus 7 ~~~LG~G~~~~Vy~hp~~~~k-~IKv~~~~~~~------------------------------------~~~~~~rEi~~ 49 (210)
T PRK10345 7 QSPLGTGRHRKCYAHPEDAQR-CIKIVYHRGDG------------------------------------GDKEIRRELKY 49 (210)
T ss_pred cceecCCCceEEEECCCCcCe-EEEEEeccccc------------------------------------hHHHHHHHHHH
Confidence 478999999999961124555 69998763110 01234567666
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCe------EEEEee--cCCCchhhhhhhhhcCCCH-HHHHHHHHHHHHHHHHhCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQ------ILTMEY--VPGIKINRIQSLDELGVDR-KRLGRYAVESYLEQILSHG 448 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~------vLVME~--ieG~~L~d~~~l~~~g~d~-~~la~~lv~~~L~qI~~~G 448 (760)
+..+.+.-.+ +-.|++.|..+.+.. .++||| ++|++|.++..... ++. ......++..+++.+|.+|
T Consensus 50 l~~L~~~~~~--h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~~--~~e~~~~~~~~L~~l~~yLh~~~ 125 (210)
T PRK10345 50 YAHLSRRLID--WSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCR--YEEDVAQLRQLLKKLKRYLLDNR 125 (210)
T ss_pred HHHhhccCCC--CcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHccc--ccHhHHHHHHHHHHHHHHHHHCC
Confidence 6666442222 334777776554442 278999 56799999764322 222 2234556667778999999
Q ss_pred ccccCCCCCcEEEeccC--CCcEEEEeecceecc
Q 004334 449 FFHADPHPGNIAVDDVN--GGRLIFYDFGMMGSI 480 (760)
Q Consensus 449 ffHaDpHPGNILV~~~~--~g~l~LiDFG~v~~l 480 (760)
++|+|+||.||+++..+ +++++|+||+-...+
T Consensus 126 IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~ 159 (210)
T PRK10345 126 IVTMELKPQNILCQRISESEVIPVVCDNIGESTF 159 (210)
T ss_pred EeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence 99999999999997422 347999994444433
No 351
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=99.21 E-value=5.3e-10 Score=116.36 Aligned_cols=184 Identities=21% Similarity=0.206 Sum_probs=122.5
Q ss_pred ccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 300 PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
+|.+|--+.||+|.. ++..||||+.+....+--. +-.++.. .|.......+...++... ...|-+|+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~--------~~~Yi~g-d~Rf~~~~~~rr~lv~~W---~~kEf~NL 122 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKR--------IRRYIQG-DPRFRNSRSNRRKLVFAW---ARKEFRNL 122 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhh--------HHHHHhc-ChhhhcCCCCHHHHHHHH---HHHHHHHH
Confidence 899999999999998 7999999999986433211 1122111 111111122333333322 35789999
Q ss_pred HHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCC---CHHHHHHHHHHHHHHHHHhCCccccCCC
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGV---DRKRLGRYAVESYLEQILSHGFFHADPH 455 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~---d~~~la~~lv~~~L~qI~~~GffHaDpH 455 (760)
.++.+ .+|.+|+++ ..-+.||+||||... -.-.-.+...+. +...+-+.+++.+-.+....|++|+|+.
T Consensus 123 ~R~~e-----AGVrvP~Pi--~~~~nVLvMEfIg~~-g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLS 194 (268)
T COG1718 123 KRAYE-----AGVRVPEPI--AFRNNVLVMEFIGDD-GLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLS 194 (268)
T ss_pred HHHHH-----cCCCCCCce--eecCCeEEEEeccCC-CCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccch
Confidence 99865 358999999 456789999999654 111111222222 2333444455554455556999999999
Q ss_pred CCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC
Q 004334 456 PGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL 513 (760)
Q Consensus 456 PGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~ 513 (760)
.-|||+. ++.+++||||.+..++...-. .++.+|...+...+...|+-
T Consensus 195 EyNiL~~---~~~p~iID~~QaV~~~hp~a~-------e~L~RDv~Ni~~fF~r~gv~ 242 (268)
T COG1718 195 EYNILVH---DGEPYIIDVSQAVTIDHPNAF-------EFLERDVRNIARFFRRKGVE 242 (268)
T ss_pred hhheEEE---CCeEEEEECccccccCCCchH-------HHHHHHHHHHHHHHHHcCCC
Confidence 9999997 689999999999988765432 33567999999999888863
No 352
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.21 E-value=5.8e-11 Score=137.01 Aligned_cols=200 Identities=13% Similarity=0.077 Sum_probs=116.5
Q ss_pred cccccccccEEEEEEEC---CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK---GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~---G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
+.||.|+||.||+|.++ ++.+++|........ .....+.+++.... .......+.+|+
T Consensus 154 ~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~k~~~~---------------~~~~~~~~~~Ei 214 (501)
T PHA03210 154 DDLPAGAFGKIFICALRASTEEAEARRGVNSTNQG----KPKCERLIAKRVKA---------------GSRAAIQLENEI 214 (501)
T ss_pred eEecCCCCcceEEEEEeccchhhhhhhcccccccc----chhhhhhHhHHhhc---------------chHHHHHHHHHH
Confidence 68999999999999872 444444422211110 11111111111100 012334466787
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcC----CCHH---HHHHHHHHHHHHHHHhCC
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELG----VDRK---RLGRYAVESYLEQILSHG 448 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g----~d~~---~la~~lv~~~L~qI~~~G 448 (760)
..+.++. +..-+.+-.++ +.....+++||++.+. +.++....... .... .++..++ ..+..+|..|
T Consensus 215 ~il~~l~----HpnIv~l~~~~-~~~~~~~lv~e~~~~~-l~~~l~~~~~~~~~~~~~~~~~~i~~ql~-~aL~yLH~~g 287 (501)
T PHA03210 215 LALGRLN----HENILKIEEIL-RSEANTYMITQKYDFD-LYSFMYDEAFDWKDRPLLKQTRAIMKQLL-CAVEYIHDKK 287 (501)
T ss_pred HHHHhCC----CCCcCcEeEEE-EECCeeEEEEeccccC-HHHHHhhccccccccccHHHHHHHHHHHH-HHHHHHHhCC
Confidence 7777662 22223333333 3445679999998764 33332111110 0111 2222222 3478899999
Q ss_pred ccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004334 449 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 528 (760)
Q Consensus 449 ffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~ 528 (760)
++|+|+||.|||++. ++.++|+|||++..+....... ..-..++..++++++...+..+...|++++.-.+.+
T Consensus 288 IiHrDLKP~NILl~~--~~~vkL~DFGla~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 360 (501)
T PHA03210 288 LIHRDIKLENIFLNC--DGKIVLGDFGTAMPFEKEREAF-----DYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLD 360 (501)
T ss_pred eecCCCCHHHEEECC--CCCEEEEeCCCceecCcccccc-----cccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHH
Confidence 999999999999985 8899999999998875432110 001234566677777766666777899999988777
Q ss_pred HHH
Q 004334 529 FLN 531 (760)
Q Consensus 529 ~l~ 531 (760)
++.
T Consensus 361 ll~ 363 (501)
T PHA03210 361 MLS 363 (501)
T ss_pred HHH
Confidence 664
No 353
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.20 E-value=7.5e-11 Score=133.46 Aligned_cols=184 Identities=17% Similarity=0.165 Sum_probs=125.4
Q ss_pred cccccccccEEEEEEE--C-C---eeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--K-G---EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~-G---~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~ 372 (760)
+-+|+|.||.||+|++ . + .+||||..+-.- ....+-...+.
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~---------------------------------~~~~~~~~e~m 209 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSS---------------------------------ELTKEQIKEFM 209 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeecccc---------------------------------cccHHHHHHHH
Confidence 6799999999999999 2 3 238999644300 00122233457
Q ss_pred HHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcc
Q 004334 373 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFF 450 (760)
Q Consensus 373 ~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~Gff 450 (760)
+||+-|..+ ++++|.--.-+-....+.+||||+|.|++|.++..-....++..+..... +..-+.+||..+++
T Consensus 210 ~EArvMr~l-----~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~I 284 (474)
T KOG0194|consen 210 KEARVMRQL-----NHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCI 284 (474)
T ss_pred HHHHHHHhC-----CCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCc
Confidence 888888875 33333322223356678899999999999999765443335544444443 33448889999999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHH-HHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREG-LLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~-l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~ 529 (760)
|||+-..|.|+.. ++.+++.|||++..-+...... .. .=-...++++.++.|..++..|++++...+.++
T Consensus 285 HRDIAARNcL~~~--~~~vKISDFGLs~~~~~~~~~~~~~-------klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Ei 355 (474)
T KOG0194|consen 285 HRDIAARNCLYSK--KGVVKISDFGLSRAGSQYVMKKFLK-------KLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEI 355 (474)
T ss_pred chhHhHHHheecC--CCeEEeCccccccCCcceeeccccc-------cCcceecChhhhccCccccccchhheeeeEEee
Confidence 9999999999985 5668999999976654211111 11 123567789999999999999999887654433
No 354
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.20 E-value=5.6e-11 Score=126.12 Aligned_cols=192 Identities=13% Similarity=0.074 Sum_probs=110.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||+|++|.||+|+. +|+.||||+......... ......+|..
T Consensus 14 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~----------------------------------~~~~~~~e~~ 59 (311)
T cd07866 14 GKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG----------------------------------FPITALREIK 59 (311)
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC----------------------------------cchhHHHHHH
Confidence 6799999999999998 589999998754321110 0001123444
Q ss_pred HHHHHHHhcCCCCceeeceeeecc-------CCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEY-------TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 447 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~-------st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~ 447 (760)
.+.++. +...+.+...+.+. ....+++|||+++. +.+.........+...+...+ +-..+..+|..
T Consensus 60 ~l~~l~----h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~-l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~ 134 (311)
T cd07866 60 ILKKLK----HPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHD-LSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN 134 (311)
T ss_pred HHHhcC----CCCccchhhheecccccccccCceEEEEEecCCcC-HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 444331 21112222222111 22358999999874 433322222223433333322 22347889999
Q ss_pred CccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHH-----HHHHHhhcCHHHHHHHHHHcC-CCCCCCChHH
Q 004334 448 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLE-----AFYGIYEKDADKVLQAMVQMG-VLVPTGDTTA 521 (760)
Q Consensus 448 GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~-----l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~a 521 (760)
|++|+|++|+||++++ ++.++|+|||++..+.......... .......++..++++++...+ ...+..|+++
T Consensus 135 ~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s 212 (311)
T cd07866 135 HILHRDIKAANILIDN--QGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWG 212 (311)
T ss_pred CeecCCCCHHHEEECC--CCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHH
Confidence 9999999999999986 8899999999998765432110000 000001223445666655432 3456789999
Q ss_pred HHHHHHHHHH
Q 004334 522 VRRTAQFFLN 531 (760)
Q Consensus 522 l~~~~~~~l~ 531 (760)
+...+.+++.
T Consensus 213 lG~il~el~~ 222 (311)
T cd07866 213 IGCVFAEMFT 222 (311)
T ss_pred HHHHHHHHHh
Confidence 9887766654
No 355
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.20 E-value=1.3e-10 Score=121.54 Aligned_cols=183 Identities=13% Similarity=0.081 Sum_probs=114.9
Q ss_pred cccccccccEEEEEEEC-------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~-------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
.-+|.|++|.||+|+.. .+.|++|+....-. .+....+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-----------------------------------~~~~~~~ 55 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD-----------------------------------ENLQSEF 55 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc-----------------------------------hHHHHHH
Confidence 56999999999999962 36799996533110 1122234
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeee--ccCCCeEEEEeecCCCchhhhhhhhhc--------CCCHHHHHHHH--HHH
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDEL--------GVDRKRLGRYA--VES 439 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~--e~st~~vLVME~ieG~~L~d~~~l~~~--------g~d~~~la~~l--v~~ 439 (760)
.+|++.++++. + ++ +++++. ......++||||++|++|.++...... .+........+ +-.
T Consensus 56 ~~E~~~l~~l~----h-~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 128 (275)
T cd05046 56 RRELDMFRKLS----H-KN--VVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIAL 128 (275)
T ss_pred HHHHHHHHhcC----C-cc--eeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHH
Confidence 55666666652 2 22 233332 223457999999999999987643221 23333333222 223
Q ss_pred HHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCh
Q 004334 440 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDT 519 (760)
Q Consensus 440 ~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~ 519 (760)
.+..+|..|++|+|++|.||+++. ++.+++.|||+.............. ......+++++....+...+..|+
T Consensus 129 ~l~~LH~~~i~H~dlkp~Nili~~--~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~y~~PE~~~~~~~~~~~Di 201 (275)
T cd05046 129 GMDHLSNARFVHRDLAARNCLVSS--QREVKVSLLSLSKDVYNSEYYKLRN-----ALIPLRWLAPEAVQEDDFSTKSDV 201 (275)
T ss_pred HHHHhhhcCcccCcCccceEEEeC--CCcEEEcccccccccCcccccccCC-----ceeEEeecChhhhccCCCCchhhH
Confidence 478899999999999999999986 7899999999886543221110000 011223566666666666777899
Q ss_pred HHHHHHHHHHH
Q 004334 520 TAVRRTAQFFL 530 (760)
Q Consensus 520 ~al~~~~~~~l 530 (760)
+++...+.+++
T Consensus 202 ~slG~~l~~l~ 212 (275)
T cd05046 202 WSFGVLMWEVF 212 (275)
T ss_pred HHHHHHHHHHH
Confidence 99987766554
No 356
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.19 E-value=3.1e-10 Score=118.87 Aligned_cols=188 Identities=19% Similarity=0.157 Sum_probs=115.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|.|++|.||+|+. +|+.||||+.+...... .....+.+|..
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~----------------------------------~~~~~~~~e~~ 50 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEE----------------------------------GIPLSTLREIA 50 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccc----------------------------------hhhhhHHHHHH
Confidence 5689999999999999 48999999876532211 00011223333
Q ss_pred HHHHHHHhcCCCCceeeceeeec----cCCCeEEEEeecCCCchhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhCCc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWE----YTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSHGF 449 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e----~st~~vLVME~ieG~~L~d~~~l~-~~g~d~~~la~~l--v~~~L~qI~~~Gf 449 (760)
.+.++.. +.+..-+.+...+.. .+...+++|||++| .+.++.... ....+...+...+ +-..+..+|..|+
T Consensus 51 ~l~~l~~-~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i 128 (287)
T cd07838 51 LLKQLES-FEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRI 128 (287)
T ss_pred HHHHhhc-cCCCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3333321 112222222222221 11237899999987 576654322 1223434333322 2234788999999
Q ss_pred cccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004334 450 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 450 fHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~ 529 (760)
+|+|++|+||+++. ++.++|+|||.+..++...... . ..+...+++++....+..+...|++++.-.+.++
T Consensus 129 ~h~~l~~~nili~~--~~~~~l~dfg~~~~~~~~~~~~------~-~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l 199 (287)
T cd07838 129 VHRDLKPQNILVTS--DGQVKIADFGLARIYSFEMALT------S-VVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAEL 199 (287)
T ss_pred eeccCChhhEEEcc--CCCEEEeccCcceeccCCcccc------c-ccccccccChHHhccCCCCCcchhhhHHHHHHHH
Confidence 99999999999986 7899999999998875432110 0 0123345666666666667788999998877766
Q ss_pred HH
Q 004334 530 LN 531 (760)
Q Consensus 530 l~ 531 (760)
+.
T Consensus 200 ~~ 201 (287)
T cd07838 200 FR 201 (287)
T ss_pred Hh
Confidence 53
No 357
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.19 E-value=7.8e-11 Score=123.69 Aligned_cols=185 Identities=19% Similarity=0.192 Sum_probs=111.7
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|+. +|+.||||+...+.... .....+.+|..
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~~~~~~~~E~~ 50 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDE----------------------------------GVPSTAIREIS 50 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeecccccc----------------------------------cchhHHHHHHH
Confidence 4689999999999998 69999999876432110 00011233444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~l--v~~~L~qI~~~GffHaD 453 (760)
.+.++. +..-+.+...+. .....+++|||+++ ++.++..... ..++...+.... +-..+..+|..|++|+|
T Consensus 51 ~l~~l~----~~~iv~~~~~~~-~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~d 124 (283)
T cd07835 51 LLKELN----HPNIVRLLDVVH-SENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRD 124 (283)
T ss_pred HHHhcC----CCCccCHhheec-cCCeEEEEEeccCc-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCC
Confidence 444442 222223333322 23567999999965 6777543222 123444333322 22347889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~l~ 531 (760)
++|.||++++ ++.++|+|||.+..+....+.... ......+++++.... .......|+++++..+.+++.
T Consensus 125 l~p~nil~~~--~~~~~l~df~~~~~~~~~~~~~~~------~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~ 195 (283)
T cd07835 125 LKPQNLLIDR--EGALKLADFGLARAFGVPVRTYTH------EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVN 195 (283)
T ss_pred CCHHHEEEcC--CCcEEEeecccccccCCCccccCc------cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHh
Confidence 9999999986 889999999998776543221000 011233445554332 233556789998877766554
No 358
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.18 E-value=3e-10 Score=118.78 Aligned_cols=183 Identities=20% Similarity=0.229 Sum_probs=111.0
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|.|++|+||+|+. +|+.||||+.+....... +. ...+|..
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~---------------------------------~~--~~~~e~~ 49 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE---------------------------------QV--NNLREIQ 49 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCch---------------------------------hh--hHHHHHH
Confidence 4689999999999998 689999998654321110 00 0112333
Q ss_pred HHHHHHHhcCCCCceeeceeeecc-CCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~-st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI~~~GffHaD 453 (760)
.+.++. .+...+.+...+.+- ....+++|||++| ++.+........++...+...+.+ ..+..+|..|++|+|
T Consensus 50 ~l~~l~---~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~d 125 (282)
T cd07831 50 ALRRLS---PHPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRD 125 (282)
T ss_pred HHhhcC---CCCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence 333331 122223333333322 1567999999987 454443222223344443333322 347889999999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCChHHHHHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~-lG~~~~~~D~~al~~~~~~~l 530 (760)
++|.||+++. +.++++|||.+..+....... . ..+...+++++... .+..+...|++++.-.+.+++
T Consensus 126 l~p~ni~l~~---~~~kl~dfg~~~~~~~~~~~~--~-----~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~ 193 (282)
T cd07831 126 IKPENILIKD---DILKLADFGSCRGIYSKPPYT--E-----YISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEIL 193 (282)
T ss_pred cCHHHEEEcC---CCeEEEecccccccccCCCcC--C-----CCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHH
Confidence 9999999973 899999999998764332110 0 11234455666443 345567789999987766654
No 359
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.18 E-value=2.8e-10 Score=119.52 Aligned_cols=187 Identities=13% Similarity=0.120 Sum_probs=118.4
Q ss_pred cccccccccEEEEEEE-C-----CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-K-----GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~-----G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~ 372 (760)
+-||.|++|.||+|.. . +..|++|+........ ....+.
T Consensus 12 ~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~-----------------------------------~~~~~~ 56 (280)
T cd05043 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEI-----------------------------------QVTLLL 56 (280)
T ss_pred eeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHH-----------------------------------HHHHHH
Confidence 5699999999999998 3 5889999865432111 012234
Q ss_pred HHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-------cCCCHHHHHHHH--HHHHHHH
Q 004334 373 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-------LGVDRKRLGRYA--VESYLEQ 443 (760)
Q Consensus 373 ~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-------~g~d~~~la~~l--v~~~L~q 443 (760)
+|+..+.++ .+..-+.+.....+.....++++||+++++|.++..... ..++...+...+ +-..+..
T Consensus 57 ~e~~~l~~l----~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~ 132 (280)
T cd05043 57 QESCLLYGL----SHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSY 132 (280)
T ss_pred HHHHHHHhC----CCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence 455544444 222223322322222356799999999999988754321 123333333322 2234788
Q ss_pred HHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHH
Q 004334 444 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 523 (760)
Q Consensus 444 I~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~ 523 (760)
+|..|++|+|++|.||+++. ++.++++|||++..+.+....... ....+...+++++.......+...|++++.
T Consensus 133 LH~~~i~H~di~p~nil~~~--~~~~kl~d~g~~~~~~~~~~~~~~----~~~~~~~~y~apE~~~~~~~~~~~Di~slG 206 (280)
T cd05043 133 LHKRGVIHKDIAARNCVIDE--ELQVKITDNALSRDLFPMDYHCLG----DNENRPVKWMALESLVNKEYSSASDVWSFG 206 (280)
T ss_pred HHHCCEeecccCHhhEEEcC--CCcEEECCCCCcccccCCceEEeC----CCCCcchhccCHHHHhcCCCCchhhHHHhH
Confidence 99999999999999999985 789999999999876443211000 001123346677776666667788999998
Q ss_pred HHHHHHH
Q 004334 524 RTAQFFL 530 (760)
Q Consensus 524 ~~~~~~l 530 (760)
-.+.+++
T Consensus 207 ~~l~el~ 213 (280)
T cd05043 207 VLLWELM 213 (280)
T ss_pred HHHHHHh
Confidence 7766554
No 360
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.17 E-value=1.4e-10 Score=126.06 Aligned_cols=181 Identities=17% Similarity=0.215 Sum_probs=114.3
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.++||.|++|.||+|.. +|+.||||......... .....+.+|.
T Consensus 15 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------~~~~~~~~E~ 60 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTP----------------------------------VLAKRTYREL 60 (328)
T ss_pred EEeecccCCeEEEEEEECCCCCEEEEEEeccccccc----------------------------------chhHHHHHHH
Confidence 36899999999999997 68999999765421100 0111233454
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHH---HHHHHHHHHHHHHHhCCcccc
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLEQILSHGFFHA 452 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~---la~~lv~~~L~qI~~~GffHa 452 (760)
..+.++ .+..-+.+...+.......+++|||+.+ ++.++... ....... ++..++ ..+..+|..|++|+
T Consensus 61 ~~l~~l----~hpniv~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~--~~~~~~~~~~~~~ql~-~aL~~LH~~~iiH~ 132 (328)
T cd07856 61 KLLKHL----RHENIISLSDIFISPLEDIYFVTELLGT-DLHRLLTS--RPLEKQFIQYFLYQIL-RGLKYVHSAGVVHR 132 (328)
T ss_pred HHHHhc----CCCCeeeEeeeEecCCCcEEEEeehhcc-CHHHHHhc--CCCCHHHHHHHHHHHH-HHHHHHHhCCcccC
Confidence 544444 2333455555554444567999999854 67665432 2223222 222222 34688999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~l~ 531 (760)
|++|.||++++ ++.++|+|||++...+..... ..++..+++++.... ...++..|++++...+.+++.
T Consensus 133 dl~p~Nili~~--~~~~~l~dfg~~~~~~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~t 201 (328)
T cd07856 133 DLKPSNILINE--NCDLKICDFGLARIQDPQMTG---------YVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLE 201 (328)
T ss_pred CCCHHHEeECC--CCCEEeCccccccccCCCcCC---------CcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHh
Confidence 99999999985 789999999998866543211 112334555554432 234566799998877766653
No 361
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.17 E-value=3.5e-10 Score=119.24 Aligned_cols=183 Identities=17% Similarity=0.149 Sum_probs=110.0
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..||.|++|.||+++. +|+.||||..+..... +....+.+|..
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-----------------------------------~~~~~~~~e~~ 54 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-----------------------------------KEQKRLLMDLD 54 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-----------------------------------HHHHHHHHHHH
Confidence 5799999999999998 5899999976542111 01112334444
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhh----hhcCCCHHHHHHHHHH--HHHHHHHh-CCc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL----DELGVDRKRLGRYAVE--SYLEQILS-HGF 449 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l----~~~g~d~~~la~~lv~--~~L~qI~~-~Gf 449 (760)
.+.++. .+..-+.+...+ ......+++|||+++ ++.++... ....++...+...... ..++.+|. .|+
T Consensus 55 ~l~~~~---~~~~iv~~~~~~-~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i 129 (288)
T cd06616 55 VVMRSS---DCPYIVKFYGAL-FREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKI 129 (288)
T ss_pred HHHHhc---CCCCEeeeeeEE-ecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Confidence 444432 111122222222 234567899999875 44443211 1122333333332222 33677876 599
Q ss_pred cccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC---CCCCCCChHHHHHHH
Q 004334 450 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG---VLVPTGDTTAVRRTA 526 (760)
Q Consensus 450 fHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG---~~~~~~D~~al~~~~ 526 (760)
+|+|++|.||+++. ++.++|+|||++..+...... ....+...+++++....+ ..++..|++++.-.+
T Consensus 130 ~H~dlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il 200 (288)
T cd06616 130 IHRDVKPSNILLDR--NGNIKLCDFGISGQLVDSIAK-------TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITL 200 (288)
T ss_pred eccCCCHHHEEEcc--CCcEEEeecchhHHhccCCcc-------ccccCccCccCHHHhccccccCCcchhhhhHHHHHH
Confidence 99999999999985 789999999998765432110 001234456677766544 456778999998776
Q ss_pred HHHH
Q 004334 527 QFFL 530 (760)
Q Consensus 527 ~~~l 530 (760)
.+++
T Consensus 201 ~el~ 204 (288)
T cd06616 201 YEVA 204 (288)
T ss_pred HHHH
Confidence 6554
No 362
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.17 E-value=3.4e-10 Score=118.05 Aligned_cols=185 Identities=16% Similarity=0.161 Sum_probs=112.4
Q ss_pred cccccccccEEEEEEE-----CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-----~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~ 373 (760)
+.||.|++|.||+|.+ +|+.||||+...+...... .+.+.+
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~----------------------------------~~~~~~ 50 (273)
T cd05074 5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSD----------------------------------IEEFLR 50 (273)
T ss_pred hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHH----------------------------------HHHHHH
Confidence 5799999999999986 2689999987764322100 112334
Q ss_pred HHHHHHHHHHhcCCCCceeeceeeeccC--------CCeEEEEeecCCCchhhhhhhhhc-----CCCHHHHHHHH--HH
Q 004334 374 EAANAELFASNFKDMDYVKVPTIFWEYT--------TPQILTMEYVPGIKINRIQSLDEL-----GVDRKRLGRYA--VE 438 (760)
Q Consensus 374 EA~nl~~f~~~~~~~~~V~VP~vy~e~s--------t~~vLVME~ieG~~L~d~~~l~~~-----g~d~~~la~~l--v~ 438 (760)
|.+.+.++ .+ + .+.+.+.... .-.++++||.+++++.++...... ..+...+.... +-
T Consensus 51 E~~~l~~l----~h-~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~ 123 (273)
T cd05074 51 EAACMKEF----DH-P--NVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIA 123 (273)
T ss_pred HHHHHhcC----CC-C--CcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Confidence 55444444 12 2 2333332111 123789999999998876432211 12222222222 22
Q ss_pred HHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004334 439 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 518 (760)
Q Consensus 439 ~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D 518 (760)
..+..+|..|++|+|++|.||+++. ++.++++|||.+..+......... ........++.++....+..+...|
T Consensus 124 ~~l~~lH~~~i~H~dikp~nili~~--~~~~kl~dfg~~~~~~~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~~sD 197 (273)
T cd05074 124 SGMEYLSSKNFIHRDLAARNCMLNE--NMTVCVADFGLSKKIYSGDYYRQG----CASKLPVKWLALESLADNVYTTHSD 197 (273)
T ss_pred HHHHHHHhCCEeecccchhhEEEcC--CCCEEECcccccccccCCcceecC----CCccCchhhcCHhHHhcCccchhhh
Confidence 3467889999999999999999975 789999999998876432210000 0001123445556666666677789
Q ss_pred hHHHHHHHHHHH
Q 004334 519 TTAVRRTAQFFL 530 (760)
Q Consensus 519 ~~al~~~~~~~l 530 (760)
++++.-.+.+++
T Consensus 198 i~slG~il~el~ 209 (273)
T cd05074 198 VWAFGVTMWEIM 209 (273)
T ss_pred hHHHHHHHHHHh
Confidence 999987766554
No 363
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.17 E-value=2.6e-10 Score=123.38 Aligned_cols=188 Identities=15% Similarity=0.115 Sum_probs=111.2
Q ss_pred cccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHHHH
Q 004334 303 AASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANAEL 380 (760)
Q Consensus 303 saSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl~~ 380 (760)
.|++++||+|.+ +|+.||||+....-... +..+.+.+|+.-+..
T Consensus 10 ~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~----------------------------------~~~~~~~~e~~~~~~ 55 (328)
T cd08226 10 FCNLTSVYLARHTPTGTLVTVRITDLENCTE----------------------------------EHLKALQNEVVLSHF 55 (328)
T ss_pred ccCceeEEEEEEcCCCcEEEEEEeccccCCH----------------------------------HHHHHHHHHHHHHHh
Confidence 349999999998 69999999876531110 111223344433332
Q ss_pred HHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhCCccccCCCCC
Q 004334 381 FASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPG 457 (760)
Q Consensus 381 f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~-~~g~d~~~la~~l--v~~~L~qI~~~GffHaDpHPG 457 (760)
+.+..-+.+..++ ......+++|||++|.++.++.... ..+.+...+...+ +-..+..+|..|++|+|++|.
T Consensus 56 ----l~h~niv~~~~~~-~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~ 130 (328)
T cd08226 56 ----FRHPNIMTSWTVF-TTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKAS 130 (328)
T ss_pred ----CCCCCcceEeeeE-ecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence 2232223333333 2345679999999999998865422 2234444332222 223467889999999999999
Q ss_pred cEEEeccCCCcEEEEeecceeccChhhH-HHHHHHHHHHhhcCHHHHHHHHHHcC--CCCCCCChHHHHHHHHHHHH
Q 004334 458 NIAVDDVNGGRLIFYDFGMMGSISPNIR-EGLLEAFYGIYEKDADKVLQAMVQMG--VLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 458 NILV~~~~~g~l~LiDFG~v~~l~~~~r-~~l~~l~~al~~~D~~~v~~~l~~lG--~~~~~~D~~al~~~~~~~l~ 531 (760)
||++.. ++.+++.|||.+........ .......-........+++++....+ ..++..|++++.-.+.+++.
T Consensus 131 Nill~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~ 205 (328)
T cd08226 131 HILISG--DGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELAT 205 (328)
T ss_pred HEEEeC--CCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHh
Confidence 999985 78999999986544322110 00000000001122335667766443 24567899999887776654
No 364
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.17 E-value=8.4e-11 Score=127.64 Aligned_cols=186 Identities=15% Similarity=0.137 Sum_probs=110.9
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.||||+..+.-... ....+.+|..
T Consensus 11 ~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~E~~ 55 (336)
T cd07849 11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQT-----------------------------------FCQRTLREIK 55 (336)
T ss_pred EEEEecCCeEEEEEEEcCCCCeEEEEEecccccch-----------------------------------hHHHHHHHHH
Confidence 6799999999999998 69999999876521110 0111223444
Q ss_pred HHHHHHHhcCCCCceeeceeeec----cCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWE----YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFF 450 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e----~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~Gff 450 (760)
.+.++. +..-+.+..++.. .....+++|||++| .+.+... ...+....+...+ +-..+..+|..|++
T Consensus 56 ~l~~l~----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~--~~~l~~~~~~~i~~ql~~aL~~LH~~~iv 128 (336)
T cd07849 56 ILRRFK----HENIIGILDIIRPPSFESFNDVYIVQELMET-DLYKLIK--TQHLSNDHIQYFLYQILRGLKYIHSANVL 128 (336)
T ss_pred HHHhCC----CCCcCchhheeecccccccceEEEEehhccc-CHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 444432 2222223222221 12346899999987 4554432 2223333332222 22347889999999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCChHHHHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~-lG~~~~~~D~~al~~~~~~~ 529 (760)
|+|+||.||+++. ++.++|+|||++.......... .. ..-..++..+++++... ....+...|++++...+.++
T Consensus 129 H~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~~--~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el 203 (336)
T cd07849 129 HRDLKPSNLLLNT--NCDLKICDFGLARIADPEHDHT--GF-LTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEM 203 (336)
T ss_pred ccCCCHHHEEECC--CCCEEECcccceeecccccccc--CC-cCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHH
Confidence 9999999999985 7899999999987765422110 00 00012233456666543 33456678999998777666
Q ss_pred HH
Q 004334 530 LN 531 (760)
Q Consensus 530 l~ 531 (760)
+.
T Consensus 204 ~~ 205 (336)
T cd07849 204 LS 205 (336)
T ss_pred Hh
Confidence 54
No 365
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.17 E-value=2.4e-10 Score=121.45 Aligned_cols=183 Identities=19% Similarity=0.222 Sum_probs=108.3
Q ss_pred cccccccccEEEEEEEC--CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~--G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.+|+|++|.||+|... |+.||||+.+......- ...+..|..
T Consensus 21 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~-----------------------------------~~~~~~e~~ 65 (296)
T cd06618 21 GEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEE-----------------------------------NKRILMDLD 65 (296)
T ss_pred eEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHH-----------------------------------HHHHHHHHH
Confidence 68999999999999993 99999998764211100 000111111
Q ss_pred HHHHHHHhcCCCCc-eeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh-CCcccc
Q 004334 377 NAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS-HGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~-V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~-~GffHa 452 (760)
.+.+ .. ++++ +.+...+ ......+++|||+++ .+.++.......++...+.... +-..+..+|. .|++|+
T Consensus 66 ~~~~---~~-~~~~i~~~~~~~-~~~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~ 139 (296)
T cd06618 66 VVLK---SH-DCPYIVKCYGYF-ITDSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHR 139 (296)
T ss_pred HHHh---cc-CCCchHhhheee-ecCCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecC
Confidence 1111 11 1121 1111111 223467999999976 4555433222223333322222 2233677886 699999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC----CCCCCChHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV----LVPTGDTTAVRRTAQF 528 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~----~~~~~D~~al~~~~~~ 528 (760)
|++|.||+++. ++.++|+|||++..+....... ...+...+++++...... .+...|++++...+.+
T Consensus 140 dl~p~nill~~--~~~~kL~dfg~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~e 210 (296)
T cd06618 140 DVKPSNILLDA--SGNVKLCDFGISGRLVDSKAKT-------RSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVE 210 (296)
T ss_pred CCcHHHEEEcC--CCCEEECccccchhccCCCccc-------CCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHH
Confidence 99999999985 7899999999988775432211 012344566677665332 4567899999877766
Q ss_pred HHH
Q 004334 529 FLN 531 (760)
Q Consensus 529 ~l~ 531 (760)
++.
T Consensus 211 l~~ 213 (296)
T cd06618 211 LAT 213 (296)
T ss_pred HHh
Confidence 653
No 366
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.16 E-value=7.7e-11 Score=127.04 Aligned_cols=184 Identities=18% Similarity=0.181 Sum_probs=111.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.|+||+..+..... .....+..|..
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----------------------------------~~~~~~~~e~~ 51 (330)
T cd07834 6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDL----------------------------------IDAKRILREIK 51 (330)
T ss_pred eeecCCCCeEEEEEEeCCCCcEEEEEeeccccccc----------------------------------hhhhhHHHHHH
Confidence 5799999999999998 48999999876532110 00112233444
Q ss_pred HHHHHHHhcCCCCceeeceeeecc----CCCeEEEEeecCCCchhhhhhhhhcCCCHHHH---HHHHHHHHHHHHHhCCc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEY----TTPQILTMEYVPGIKINRIQSLDELGVDRKRL---GRYAVESYLEQILSHGF 449 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~----st~~vLVME~ieG~~L~d~~~l~~~g~d~~~l---a~~lv~~~L~qI~~~Gf 449 (760)
.+..+. +..-+.+..++... .+..+++|||+++ .|.++.... ..++...+ +..++ ..+..+|..|+
T Consensus 52 ~l~~l~----~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~l~~~~~~~i~~~l~-~~l~~LH~~gi 124 (330)
T cd07834 52 LLRHLR----HENIIGLLDILRPPSPEDFNDVYIVTELMET-DLHKVIKSP-QPLTDDHIQYFLYQIL-RGLKYLHSANV 124 (330)
T ss_pred HHHhcC----CcchhhhhhhhcccCcccccceEEEecchhh-hHHHHHhCC-CCCCHHHHHHHHHHHH-HHHHHHHhCCe
Confidence 444331 11112222222111 1356999999986 566654321 12333332 22333 33678999999
Q ss_pred cccCCCCCcEEEeccCCCcEEEEeecceeccChhhHH--HHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHH
Q 004334 450 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIRE--GLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTA 526 (760)
Q Consensus 450 fHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~--~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~~~ 526 (760)
+|+|+||+||+++. ++.++|+|||++......... .... ...+..+++++..... ......|++++.-.+
T Consensus 125 ~H~dlkp~nili~~--~~~~~L~dfg~~~~~~~~~~~~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il 197 (330)
T cd07834 125 IHRDLKPSNILVNS--NCDLKICDFGLARGVDPDEDEKGFLTE-----YVVTRWYRAPELLLSSSRYTKAIDIWSVGCIF 197 (330)
T ss_pred ecCCCCHHHEEEcC--CCCEEEcccCceEeecccccccccccc-----cccccCcCCceeeecccCCCcchhHHHHHHHH
Confidence 99999999999986 799999999999987665321 0000 0123334555554444 456678999988776
Q ss_pred HHHH
Q 004334 527 QFFL 530 (760)
Q Consensus 527 ~~~l 530 (760)
.+++
T Consensus 198 ~~l~ 201 (330)
T cd07834 198 AELL 201 (330)
T ss_pred HHHH
Confidence 6554
No 367
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.16 E-value=1.4e-10 Score=125.68 Aligned_cols=186 Identities=18% Similarity=0.130 Sum_probs=111.9
Q ss_pred cccccccccEEEEEEE--C--CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--K--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~--G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E 374 (760)
+.||.|++|.||+|+. . |..||||+.+...... .....+.+|
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~----------------------------------~~~~~~~~E 51 (332)
T cd07857 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKK----------------------------------ILAKRALRE 51 (332)
T ss_pred EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccc----------------------------------hhHHHHHHH
Confidence 5699999999999998 4 7799999865421110 011123345
Q ss_pred HHHHHHHHHhcCCCCceeeceeee------ccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004334 375 AANAELFASNFKDMDYVKVPTIFW------EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 446 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~V~VP~vy~------e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~ 446 (760)
...+.++. ++++ +++.+. ......+++|||+++ +|.+.... ...++...+...+ +-..+..+|.
T Consensus 52 ~~~l~~l~----~h~~--iv~~~~~~~~~~~~~~~~~~~~e~~~~-~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~ 123 (332)
T cd07857 52 LKLLRHFR----GHKN--ITCLYDMDIVFPGNFNELYLYEELMEA-DLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHS 123 (332)
T ss_pred HHHHHHhc----CCCC--hheeeeeeeeccccCCcEEEEEecccC-CHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 55555442 2222 222221 122346899999975 66665421 2233433333322 2234788999
Q ss_pred CCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHH
Q 004334 447 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRT 525 (760)
Q Consensus 447 ~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~~ 525 (760)
.|++|+|+||+||++++ ++.++|+|||++..+.......... ..-..++..+++++....+ ..+...|++++...
T Consensus 124 ~givH~dlkp~Nili~~--~~~~kl~Dfg~a~~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~ 199 (332)
T cd07857 124 ANVLHRDLKPGNLLVNA--DCELKICDFGLARGFSENPGENAGF--MTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCI 199 (332)
T ss_pred CCcccCCCCHHHeEEcC--CCCEEeCcCCCceeccccccccccc--ccCcccCccccCcHHHhCCCCCCcHHHHHHHHHH
Confidence 99999999999999986 7899999999998776432210000 0011234456667755432 34566799998877
Q ss_pred HHHHH
Q 004334 526 AQFFL 530 (760)
Q Consensus 526 ~~~~l 530 (760)
+.+++
T Consensus 200 l~~l~ 204 (332)
T cd07857 200 LAELL 204 (332)
T ss_pred HHHHH
Confidence 66554
No 368
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.16 E-value=2.2e-10 Score=118.05 Aligned_cols=118 Identities=17% Similarity=0.163 Sum_probs=80.2
Q ss_pred CCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceec
Q 004334 402 TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS 479 (760)
Q Consensus 402 t~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~ 479 (760)
...+++|||++|++|.+.... ....+...+...+.+ ..+..+|..|++|+|+||.||+++. ++.++++|||....
T Consensus 58 ~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~df~~~~~ 134 (237)
T cd05576 58 DSVFLVLQHAEGGKLWSHISK-FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDD--RGHIQLTYFSRWSE 134 (237)
T ss_pred CeEEEEEecCCCCCHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC--CCCEEEecccchhc
Confidence 457999999999999886532 223444433333222 3367889999999999999999986 78999999998766
Q ss_pred cChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 480 ISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 480 l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+...... ...+..+++++....+..++..|++++.-.+.+++.
T Consensus 135 ~~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~ 177 (237)
T cd05576 135 VEDSCDG---------EAVENMYCAPEVGGISEETEACDWWSLGAILFELLT 177 (237)
T ss_pred ccccccc---------CCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHH
Confidence 6542111 011223455655544555667899999877766654
No 369
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.16 E-value=6.7e-10 Score=116.41 Aligned_cols=149 Identities=16% Similarity=0.172 Sum_probs=97.7
Q ss_pred cccc-cccccEEEEEEECCeeEEEEEec-CCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIA-AASLGQVHRARLKGEEVVVKVQR-PGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIa-saSiGQVhrA~l~G~~VAVKVqr-Pgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..+| .|+.|.||.....|..++||.-+ +++...+..+ . +.+. ........+|.+
T Consensus 37 ~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~-------------~--------~~~~---~~~~~r~~rE~~ 92 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKD-------------R--------YLFT---GLERTRAFAEFR 92 (239)
T ss_pred ceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhh-------------c--------cccc---chhhhHHHHHHH
Confidence 4676 89999999999989999999764 4322111110 0 0000 011233567888
Q ss_pred HHHHHHHhcCCCCceeeceeeecc---C---CCeEEEEeecCC-CchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEY---T---TPQILTMEYVPG-IKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGF 449 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~---s---t~~vLVME~ieG-~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~Gf 449 (760)
.+.++.+ .++.+|+++... . ...+|+|||++| .+|.++... ...+.. .... +..++..+|..|+
T Consensus 93 ll~~L~~-----~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~--~~l~~~-~~~~-i~~~l~~lH~~GI 163 (239)
T PRK01723 93 LLAQLYE-----AGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQE--APLSEE-QWQA-IGQLIARFHDAGV 163 (239)
T ss_pred HHHHHHh-----CCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhc--CCCCHH-HHHH-HHHHHHHHHHCCC
Confidence 8888854 345566665321 1 123699999998 688776432 222322 2233 3456899999999
Q ss_pred cccCCCCCcEEEeccCCCcEEEEeecceeccCh
Q 004334 450 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 482 (760)
Q Consensus 450 fHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~ 482 (760)
+|+|+||+|||+++ +++++|+|||.+..-.+
T Consensus 164 ~HrDlkp~NILv~~--~~~v~LIDfg~~~~~~~ 194 (239)
T PRK01723 164 YHADLNAHNILLDP--DGKFWLIDFDRGELRTP 194 (239)
T ss_pred CCCCCCchhEEEcC--CCCEEEEECCCcccCCC
Confidence 99999999999985 67999999998877653
No 370
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.15 E-value=1.6e-10 Score=139.57 Aligned_cols=187 Identities=16% Similarity=0.180 Sum_probs=132.0
Q ss_pred cccccccccEEEEEEE---CCe----eEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL---KGE----EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l---~G~----~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
..||.|.||.||+|.. +|. .||||..++...++ -...+
T Consensus 698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~-----------------------------------~~~~F 742 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQ-----------------------------------EVSDF 742 (1025)
T ss_pred eeeccccccceEEEEEecCCCCccceEEEEEeccccCCHH-----------------------------------HHHHH
Confidence 5899999999999999 354 48888776643222 11235
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh------hcCCCHHHHHHHHHHHH--HHH
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD------ELGVDRKRLGRYAVESY--LEQ 443 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~------~~g~d~~~la~~lv~~~--L~q 443 (760)
.+||..|..|. |.+-|..--|-.. ....++++|||+|+.|..+++.. ...+...++....++.. +++
T Consensus 743 l~Ea~~m~~f~----HpNiv~liGv~l~-~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~Y 817 (1025)
T KOG1095|consen 743 LKEALLMSKFD----HPNIVSLIGVCLD-SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNY 817 (1025)
T ss_pred HHHHHHHhcCC----CcceeeEEEeecC-CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHH
Confidence 78888888772 3333444444444 67789999999999999987654 44556677766665544 788
Q ss_pred HHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHH
Q 004334 444 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 523 (760)
Q Consensus 444 I~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~ 523 (760)
+.+.+|||+|+-.-|.|++. ...+++.||||++.+-..+- |..--.| .--...|+++...-|+.+...|+++|.
T Consensus 818 Le~~~fvHRDLAaRNCLL~~--~r~VKIaDFGlArDiy~~~y--yr~~~~a--~lPvkWm~PEsl~d~iFtskSDvWsFG 891 (1025)
T KOG1095|consen 818 LESKHFVHRDLAARNCLLDE--RRVVKIADFGLARDIYDKDY--YRKHGEA--MLPVKWMPPESLKDGIFTSKSDVWSFG 891 (1025)
T ss_pred HHhCCCcCcchhhhheeecc--cCcEEEcccchhHhhhhchh--eeccCcc--ccceecCCHHHHhhcccccccchhhhH
Confidence 99999999999999999986 67899999999995543321 1100000 111345666666668889999999999
Q ss_pred HHHHHHHH
Q 004334 524 RTAQFFLN 531 (760)
Q Consensus 524 ~~~~~~l~ 531 (760)
..+-+++.
T Consensus 892 VllWEifs 899 (1025)
T KOG1095|consen 892 VLLWEIFS 899 (1025)
T ss_pred HHHHHHHh
Confidence 87766654
No 371
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.15 E-value=5.2e-10 Score=117.17 Aligned_cols=122 Identities=14% Similarity=0.044 Sum_probs=74.8
Q ss_pred CCeEEEEeecCCCchhhhhhhhhcC---CCHH---HHHHHHHHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeec
Q 004334 402 TPQILTMEYVPGIKINRIQSLDELG---VDRK---RLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFG 475 (760)
Q Consensus 402 t~~vLVME~ieG~~L~d~~~l~~~g---~d~~---~la~~lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG 475 (760)
...++||||++|++|.++....... .+.. .++..+ -..+..+|..|++|+|++|.||+++. ++.++++|||
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i-~~al~~lH~~~i~H~dikp~nil~~~--~~~~~l~Dfg 144 (268)
T cd05086 68 IPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEI-AAGVTHMHKHNFLHSDLALRNCFLTS--DLTVKVGDYG 144 (268)
T ss_pred CccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHH-HHHHHHHHHCCeeccCCccceEEEcC--CccEEecccc
Confidence 4569999999999998865432111 1211 222222 23477899999999999999999985 7899999999
Q ss_pred ceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-------CCCCCCCChHHHHHHHHHHH
Q 004334 476 MMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-------GVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 476 ~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-------G~~~~~~D~~al~~~~~~~l 530 (760)
+............. ....+...++++++... ...++..|++++.-.+.+++
T Consensus 145 ~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~ 202 (268)
T cd05086 145 IGPSRYKEDYIETE----DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELF 202 (268)
T ss_pred cccccCcchhhhcc----cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHH
Confidence 87543221110000 00012233455555421 11245689999987766554
No 372
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.15 E-value=2.2e-10 Score=120.12 Aligned_cols=183 Identities=19% Similarity=0.241 Sum_probs=109.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|+. +|+.|+||......... ++. ...+|..
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~---------------------------------~~~--~~~~e~~ 49 (283)
T cd07830 5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW---------------------------------EEC--MNLREVK 49 (283)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEehhhccch---------------------------------hHH--HHHHHHH
Confidence 4699999999999999 58899999755422110 000 0112322
Q ss_pred HHHHHHHhcCCCCc-eeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHHHH--HHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVE--SYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~-V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~lv~--~~L~qI~~~GffHa 452 (760)
.+.++ .++++ +.+...+ ......++||||+ ++.+.+...... ..++...+.....+ ..+..+|..|++|+
T Consensus 50 ~l~~~----~~h~~i~~~~~~~-~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~ 123 (283)
T cd07830 50 SLRKL----NEHPNIVKLKEVF-RENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHR 123 (283)
T ss_pred HHHhc----cCCCCchhHHHHh-hcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 23222 11121 1111112 2245679999999 556666443222 23344443333222 33678899999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH-HcCCCCCCCChHHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV-QMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~-~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
|++|+||++++ ++.++|+|||.+..+....... -..++..+++++.. .....+...|++++...+.+++.
T Consensus 124 dl~~~ni~i~~--~~~~~l~d~~~~~~~~~~~~~~-------~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~ 194 (283)
T cd07830 124 DLKPENLLVSG--PEVVKIADFGLAREIRSRPPYT-------DYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYT 194 (283)
T ss_pred CCChhhEEEcC--CCCEEEeecccceeccCCCCcC-------CCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHh
Confidence 99999999986 8899999999998775432110 01123334455543 23345667899999877766554
No 373
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.15 E-value=4.1e-10 Score=120.34 Aligned_cols=190 Identities=15% Similarity=0.101 Sum_probs=114.5
Q ss_pred cccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHHHH
Q 004334 301 IAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANAEL 380 (760)
Q Consensus 301 IasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl~~ 380 (760)
++.++++.|++++.+|+.||||+.+...... +-...+.+|...+.+
T Consensus 10 ~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~----------------------------------~~~~~~~~Ei~~l~~ 55 (314)
T cd08216 10 FEDLMIVHLAKHKPTNTLVAVKKINLDSCSK----------------------------------EDLKLLQQEIITSRQ 55 (314)
T ss_pred hcCCceEEEEEecCCCCEEEEEEEeccccch----------------------------------hHHHHHHHHHHHHHh
Confidence 4566677777777789999999876531110 011123445555554
Q ss_pred HHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhCCccccCCCCC
Q 004334 381 FASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPG 457 (760)
Q Consensus 381 f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~-~~g~d~~~la~~l--v~~~L~qI~~~GffHaDpHPG 457 (760)
+. +..-+.+..++ ......+++|||++|+++.++.... ..+.+...+...+ +-..+..+|.+|++|+|++|+
T Consensus 56 l~----h~~i~~~~~~~-~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~ 130 (314)
T cd08216 56 LQ----HPNILPYVTSF-IVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKAS 130 (314)
T ss_pred cC----Ccchhhhhhee-ecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcc
Confidence 42 22222222222 3345679999999999998876432 2234443333322 223467899999999999999
Q ss_pred cEEEeccCCCcEEEEeecceeccChhhHHH-HHHHHHHHhhcCHHHHHHHHHHcC--CCCCCCChHHHHHHHHHHHH
Q 004334 458 NIAVDDVNGGRLIFYDFGMMGSISPNIREG-LLEAFYGIYEKDADKVLQAMVQMG--VLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 458 NILV~~~~~g~l~LiDFG~v~~l~~~~r~~-l~~l~~al~~~D~~~v~~~l~~lG--~~~~~~D~~al~~~~~~~l~ 531 (760)
||+++. ++.+++.|||.+..+....... ..........++..++++++.... ..++..|++++.-.+.+++.
T Consensus 131 Nili~~--~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~ 205 (314)
T cd08216 131 HILLSG--DGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELAN 205 (314)
T ss_pred eEEEec--CCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHh
Confidence 999986 7899999999887664322210 000001112234456677766542 24567899999877666543
No 374
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.14 E-value=1.4e-10 Score=125.75 Aligned_cols=188 Identities=18% Similarity=0.162 Sum_probs=112.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|+||+|+. +|+.||+|+........ +....+.+|..
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~----------------------------------~~~~~~~~e~~ 56 (334)
T cd07855 11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVP----------------------------------TLAKRTLRELK 56 (334)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEeccccccc----------------------------------cchHHHHHHHH
Confidence 5799999999999998 59999999865421110 00111233444
Q ss_pred HHHHHHHhcCCCCceeeceeeec---cCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWE---YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFH 451 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e---~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffH 451 (760)
.+.++. +..-+.+..++.. .....+++|||++| .+.++.... ..++...+...+ +-..+..+|..|++|
T Consensus 57 ~l~~l~----h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 130 (334)
T cd07855 57 ILRHFK----HDNIIAIRDILRPPGADFKDVYVVMDLMES-DLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHSANVIH 130 (334)
T ss_pred HHHhcC----CCCccCHHHhccccCCCCceEEEEEehhhh-hHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 444442 2222233333321 22356999999976 666654222 123333332222 234477899999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCChHHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~-lG~~~~~~D~~al~~~~~~~l 530 (760)
+|++|.||++++ ++.++|+|||++..+........ .. ..-..+...+++++... .+..+...|+++++..+.+++
T Consensus 131 ~dlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~-~~-~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~ 206 (334)
T cd07855 131 RDLKPSNLLVNE--DCELRIGDFGMARGLSSSPTEHK-YF-MTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEML 206 (334)
T ss_pred CCCCHHHEEEcC--CCcEEecccccceeecccCcCCC-cc-cccccccccccChHHhcCCcccccccchHHHHHHHHHHH
Confidence 999999999986 89999999999877644321100 00 00011233445566543 244567789999987766654
No 375
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.14 E-value=7.8e-10 Score=116.22 Aligned_cols=180 Identities=22% Similarity=0.276 Sum_probs=125.6
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
++||-|--+.||.|.. +|.+||||.-|-|- ..+.. .+.--..+. ......|..+-.. .-.+|-..
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~Gr-tsFrk----vk~~R~y~~------~~~h~sWl~~sRl---~A~rEf~~ 162 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGR-TSFRK----VKRNRDYLA------DKEHGSWLYVSRL---AAEREFEA 162 (304)
T ss_pred cccccCccceEEEEECCCCCEEEEEEeecCc-hhhhh----hcchhhhhc------cccCcchhhhHHH---HHHHHHHH
Confidence 6899999999999999 79999999988873 22221 111111111 0112234333222 23467777
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPG 457 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDpHPG 457 (760)
|.++. ..++.||+++. -+++++||||++|.+|..+.- ...++..+...+++.+-. +...|++|||+.+-
T Consensus 163 L~~L~-----~~G~~VP~P~~--~nRHaVvMe~ieG~eL~~~r~---~~en~~~il~~il~~~~~-~~~~GiVHGDlSef 231 (304)
T COG0478 163 LQRLY-----PEGVKVPKPIA--WNRHAVVMEYIEGVELYRLRL---DVENPDEILDKILEEVRK-AYRRGIVHGDLSEF 231 (304)
T ss_pred HHHhh-----hcCCCCCCccc--cccceeeeehcccceeecccC---cccCHHHHHHHHHHHHHH-HHHcCccccCCchh
Confidence 77773 23578999883 477899999999999887531 234566777777766543 44999999999999
Q ss_pred cEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC
Q 004334 458 NIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV 512 (760)
Q Consensus 458 NILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~ 512 (760)
||+|++ +|.+++|||-.+...+...-..+ +.+|.+.++..+.+-..
T Consensus 232 NIlV~~--dg~~~vIDwPQ~v~~~hp~a~e~-------l~RDv~nii~yFrrky~ 277 (304)
T COG0478 232 NILVTE--DGDIVVIDWPQAVPISHPDAEEL-------LERDVENIIKYFRRKYG 277 (304)
T ss_pred eEEEec--CCCEEEEeCcccccCCCCCHHHH-------HHhHHHHHHHHHHHhcc
Confidence 999996 89999999999999887765433 46788888777776543
No 376
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.13 E-value=7.9e-11 Score=127.79 Aligned_cols=185 Identities=20% Similarity=0.176 Sum_probs=117.7
Q ss_pred cccccccccEEEEEEECC--eeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLKG--EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~G--~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..+|-||||.|-.|..+| +.+||||.+.++--+ ..|++. .+.++......+...=++++.
T Consensus 355 ~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQ-dDDvec-----tm~EKrvLAL~~kppFL~qlH------------ 416 (683)
T KOG0696|consen 355 MVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQ-DDDVEC-----TMVEKRVLALPGKPPFLVQLH------------ 416 (683)
T ss_pred EEeccCccceeeeecccCcchhhhhhhhccceeee-cCcccc-----eehhhhheecCCCCchHHHHH------------
Confidence 579999999999999855 679999988865321 112221 011110000000011112222
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhh-hhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINR-IQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPH 455 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d-~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDpH 455 (760)
..|.. -.+.+.||||+.|+.|.- +++...........-..-+...|--+|..|++.+|+|
T Consensus 417 ------ScFQT-------------mDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLK 477 (683)
T KOG0696|consen 417 ------SCFQT-------------MDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLK 477 (683)
T ss_pred ------HHhhh-------------hhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeecc
Confidence 22221 134689999999998863 3333333222222222233444566899999999999
Q ss_pred CCcEEEeccCCCcEEEEeecceec--cChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 456 PGNIAVDDVNGGRLIFYDFGMMGS--ISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 456 PGNILV~~~~~g~l~LiDFG~v~~--l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
-.|||++. +|.|++.||||++. .+..+.. ..-+++++++++++...-....+|-+++...+++++
T Consensus 478 LDNvmLd~--eGHiKi~DFGmcKEni~~~~TTk--------TFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEml 544 (683)
T KOG0696|consen 478 LDNVMLDS--EGHIKIADFGMCKENIFDGVTTK--------TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 544 (683)
T ss_pred ccceEecc--CCceEeeecccccccccCCccee--------eecCCCcccccceEEecccccchhHHHHHHHHHHHH
Confidence 99999986 89999999999975 2222222 235799999999998877778889999988776665
No 377
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.13 E-value=1.6e-10 Score=129.94 Aligned_cols=189 Identities=20% Similarity=0.187 Sum_probs=128.5
Q ss_pred cccccccccEEEEEEECC-eeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLKG-EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~G-~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
+.||+|-||.||.+...| ..||||..||+.-+.- ...+..|++.
T Consensus 544 ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~-----------------------------------r~~F~kEIki 588 (807)
T KOG1094|consen 544 EKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNA-----------------------------------RNDFLKEIKI 588 (807)
T ss_pred hhhcCcccceeEEEEecCceEEEEeecCcccchhH-----------------------------------HHHHHHHHHH
Confidence 579999999999999965 9999999999643321 2345667777
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcC-CCHHHHHHH--HHHHHHHHHHhCCccccCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELG-VDRKRLGRY--AVESYLEQILSHGFFHADP 454 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g-~d~~~la~~--lv~~~L~qI~~~GffHaDp 454 (760)
+.++ +|.+-|.+-.|.- -....+++|||++.+.|+++....... .+....... .+.+.++++-..+|+|+|+
T Consensus 589 LsqL----khPNIveLvGVC~-~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~ 663 (807)
T KOG1094|consen 589 LSRL----KHPNIVELLGVCV-QDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDL 663 (807)
T ss_pred Hhcc----CCCCeeEEEeeee-cCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccc
Confidence 7766 3333333333321 124568999999999999976433221 122222222 2334577788899999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSF 533 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~~~ 533 (760)
-|.|+|++. ++.++++||||++.+-...-...- +-..--...|+.+.+-+|..+...|++++...+.+++.-.
T Consensus 664 a~rNcLv~~--e~~iKiadfgmsR~lysg~yy~vq----gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C 736 (807)
T KOG1094|consen 664 ATRNCLVDG--EFTIKIADFGMSRNLYSGDYYRVQ----GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLC 736 (807)
T ss_pred cccceeecC--cccEEecCcccccccccCCceeee----cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHH
Confidence 999999985 889999999999866332211100 0000123567788888999999999999999887776544
No 378
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.12 E-value=3.9e-10 Score=129.97 Aligned_cols=78 Identities=19% Similarity=0.214 Sum_probs=55.2
Q ss_pred CCeEEEEeecCCCchhhhhhhhhcC-----------------------CCHHHHHHHH--HHHHHHHHHhCCccccCCCC
Q 004334 402 TPQILTMEYVPGIKINRIQSLDELG-----------------------VDRKRLGRYA--VESYLEQILSHGFFHADPHP 456 (760)
Q Consensus 402 t~~vLVME~ieG~~L~d~~~l~~~g-----------------------~d~~~la~~l--v~~~L~qI~~~GffHaDpHP 456 (760)
...+|||||++|++|.++....... .+...+.... +-..+..+|..|++|+|+||
T Consensus 258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp 337 (507)
T PLN03224 258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKP 337 (507)
T ss_pred CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCch
Confidence 4579999999999998875421100 0111111111 22346779999999999999
Q ss_pred CcEEEeccCCCcEEEEeecceeccC
Q 004334 457 GNIAVDDVNGGRLIFYDFGMMGSIS 481 (760)
Q Consensus 457 GNILV~~~~~g~l~LiDFG~v~~l~ 481 (760)
.||+++. ++.++++|||++..+.
T Consensus 338 ~NILl~~--~~~~kL~DFGla~~~~ 360 (507)
T PLN03224 338 ENLLVTV--DGQVKIIDFGAAVDMC 360 (507)
T ss_pred HhEEECC--CCcEEEEeCcCccccc
Confidence 9999985 7899999999987654
No 379
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.12 E-value=3.6e-10 Score=122.60 Aligned_cols=189 Identities=16% Similarity=0.141 Sum_probs=112.5
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|++|.||+|.. +|+.||||......... . . ...+..|..
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-----------------------------~----~-~~~~~~E~~ 58 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNA-----------------------------T----D-AQRTFREIM 58 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcc-----------------------------h----h-hhhhhHHHH
Confidence 5799999999999998 58999999764321100 0 0 011233544
Q ss_pred HHHHHHHhcCCCCceeeceeeecc-CCCeEEEEeecCCCchhhhhhhhhcCCCHHH---HHHHHHHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~-st~~vLVME~ieG~~L~d~~~l~~~g~d~~~---la~~lv~~~L~qI~~~GffHa 452 (760)
.+.++. .+..-+.+..++... ....++||||++| +|.+..... ..+... ++..++ ..+..+|..|++|+
T Consensus 59 ~l~~l~---~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~--~~~~~~~~~i~~qi~-~~L~~LH~~~i~H~ 131 (337)
T cd07852 59 FLQELG---DHPNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVIRAN--ILEDVHKRYIMYQLL-KALKYIHSGNVIHR 131 (337)
T ss_pred HHHHhc---CCCCccceeeeeccCCCceEEEEeccccc-CHHHHHhcC--CCCHHHHHHHHHHHH-HHHHHHHHCCeecC
Confidence 444441 122223333333222 2246999999986 676654322 223222 223233 34678999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH-HcCCCCCCCChHHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV-QMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~-~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
|++|.||+++. ++.++|+|||++..+.......-.... .-..+...+++++.. .........|++++...+.+++.
T Consensus 132 dl~p~nill~~--~~~~kl~d~g~~~~~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~t 208 (337)
T cd07852 132 DLKPSNILLNS--DCRVKLADFGLARSLSELEENPENPVL-TDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLL 208 (337)
T ss_pred CCCHHHEEEcC--CCcEEEeeccchhccccccccccCcch-hcccccccccCceeeeccccccccchHHHHHHHHHHHHh
Confidence 99999999986 889999999999877543221000000 001133445556543 23445667899999887776654
No 380
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.11 E-value=3.6e-10 Score=120.39 Aligned_cols=192 Identities=15% Similarity=0.121 Sum_probs=111.3
Q ss_pred cccccccccEEEEEEE----CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l----~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E 374 (760)
..||+|++|.||+|.. +|+.||||+..+..... +.....+.+|
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~---------------------------------~~~~~~~~~e 52 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQY---------------------------------TGISQSACRE 52 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccc---------------------------------cCccHHHHHH
Confidence 4699999999999998 37899999987742100 0011122344
Q ss_pred HHHHHHHHHhcCCCCceeeceeeecc-CCCeEEEEeecCCCchhhhhh-hhh---cCCCHHHHHHH--HHHHHHHHHHhC
Q 004334 375 AANAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQS-LDE---LGVDRKRLGRY--AVESYLEQILSH 447 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~V~VP~vy~e~-st~~vLVME~ieG~~L~d~~~-l~~---~g~d~~~la~~--lv~~~L~qI~~~ 447 (760)
+..+.++ .+..-+.+...+..- ....++||||+++. +.++.. ... ..+....+... .+-..+..+|..
T Consensus 53 ~~~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 127 (316)
T cd07842 53 IALLREL----KHENVVSLVEVFLEHADKSVYLLFDYAEHD-LWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN 127 (316)
T ss_pred HHHHHhc----CCCCccceEEEEeCCCCceEEEEEeCCCcC-HHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 4444444 222223344433222 14579999999874 444321 111 12233322222 123347788999
Q ss_pred CccccCCCCCcEEEec--cCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHH
Q 004334 448 GFFHADPHPGNIAVDD--VNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRR 524 (760)
Q Consensus 448 GffHaDpHPGNILV~~--~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~ 524 (760)
|++|+|++|.||+++. ..++.++++|||++..+......... ..-..+...+++++....+ ......|+++++-
T Consensus 128 ~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~ 204 (316)
T cd07842 128 WVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLAD---LDPVVVTIWYRAPELLLGARHYTKAIDIWAIGC 204 (316)
T ss_pred CEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccc---cCCccccccccCHHHHhCCCCCCcHHHHHHHHH
Confidence 9999999999999973 12578999999998876543221000 0000122335666655332 2456679999987
Q ss_pred HHHHHHH
Q 004334 525 TAQFFLN 531 (760)
Q Consensus 525 ~~~~~l~ 531 (760)
.+.+++.
T Consensus 205 ~l~~l~~ 211 (316)
T cd07842 205 IFAELLT 211 (316)
T ss_pred HHHHHHh
Confidence 7766553
No 381
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.11 E-value=1e-10 Score=135.08 Aligned_cols=214 Identities=16% Similarity=0.221 Sum_probs=145.9
Q ss_pred hhcCCCCCCHHHHHHHHHHHhCCChhhhhcccCccccccccccEEEEEEEC--C---eeEEEEEecCCchhhHHHHHHHH
Q 004334 265 LQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLK--G---EEVVVKVQRPGLKDLFDIDLKNL 339 (760)
Q Consensus 265 Lqd~vpp~p~~~v~~iie~elG~~~~~iF~~fd~~PIasaSiGQVhrA~l~--G---~~VAVKVqrPgi~~~i~~DL~iL 339 (760)
.+.-+.|+.+|+-.+.+. ||-+.++--+-.+ ++.||+|.||.||+|+|+ | ..||||..+-|-.+..+.|
T Consensus 603 ~k~YiDP~TYEDPnqAvr-eFakEId~s~i~I-e~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytekqrrd---- 676 (996)
T KOG0196|consen 603 TKTYIDPHTYEDPNQAVR-EFAKEIDPSCVKI-EKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRD---- 676 (996)
T ss_pred ceeecCCccccCccHHHH-HhhhhcChhheEE-EEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhh----
Confidence 455567888877666554 2333333222222 358999999999999993 4 5799999988766553333
Q ss_pred HHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhh
Q 004334 340 RVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRI 419 (760)
Q Consensus 340 ~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~ 419 (760)
+..||..|-+| .|.+-++.-.|+ --+..-++++|||+.++|+.+
T Consensus 677 -------------------------------FL~EAsIMGQF----dHPNIIrLEGVV-Tks~PvMIiTEyMENGsLDsF 720 (996)
T KOG0196|consen 677 -------------------------------FLSEASIMGQF----DHPNIIRLEGVV-TKSKPVMIITEYMENGSLDSF 720 (996)
T ss_pred -------------------------------hhhhhhhcccC----CCCcEEEEEEEE-ecCceeEEEhhhhhCCcHHHH
Confidence 34566666655 333334444444 345667999999999999998
Q ss_pred hhhhhcCCCHHHHHH--HHHHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhh
Q 004334 420 QSLDELGVDRKRLGR--YAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYE 497 (760)
Q Consensus 420 ~~l~~~g~d~~~la~--~lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~ 497 (760)
+......+..-++.. +++.+-++++-.+|++||||-.-||||+. +-..++.|||+.+.+.++.-..+... -+ .
T Consensus 721 LR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNs--nLvCKVsDFGLSRvledd~~~~ytt~-GG--K 795 (996)
T KOG0196|consen 721 LRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNS--NLVCKVSDFGLSRVLEDDPEAAYTTL-GG--K 795 (996)
T ss_pred HhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeecc--ceEEEeccccceeecccCCCcccccc-CC--c
Confidence 876655555444543 45778899999999999999999999985 67889999999998866542222111 00 0
Q ss_pred cCHHHHHHHHHHcCCCCCCCChHHHHHH
Q 004334 498 KDADKVLQAMVQMGVLVPTGDTTAVRRT 525 (760)
Q Consensus 498 ~D~~~v~~~l~~lG~~~~~~D~~al~~~ 525 (760)
=-...-+++.+.....+...|++++.-.
T Consensus 796 IPiRWTAPEAIa~RKFTsASDVWSyGIV 823 (996)
T KOG0196|consen 796 IPIRWTAPEAIAYRKFTSASDVWSYGIV 823 (996)
T ss_pred cceeecChhHhhhcccCchhhccccceE
Confidence 0124456777777777888899987653
No 382
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.11 E-value=2.1e-11 Score=146.93 Aligned_cols=180 Identities=17% Similarity=0.144 Sum_probs=115.7
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEec--CCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQR--PGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqr--Pgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E 374 (760)
.-||.|-||+||-|.. +|+-.|||-.+ |+.. +. +. .+.+|
T Consensus 1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~------------------k~----------~~--------~i~eE 1284 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDH------------------KT----------FK--------LIAEE 1284 (1509)
T ss_pred cccCCcceeeeEEeecCCccchhhhhhhhcCcccc------------------cc----------Cc--------chHHH
Confidence 4799999999999998 69999998432 1110 00 00 12234
Q ss_pred HHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHH---HHHHHHHHHHHHHHhCCccc
Q 004334 375 AANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLEQILSHGFFH 451 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~---la~~lv~~~L~qI~~~GffH 451 (760)
...++.+ +++++.-|..+.-+..+.+|-||||+|++|.++..... ..... +-...+-..+..+|.+|++|
T Consensus 1285 m~vlE~l-----nHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~gIVH 1357 (1509)
T KOG4645|consen 1285 MKVLEGL-----NHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEHGIVH 1357 (1509)
T ss_pred HHHHHhc-----cCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhcCcee
Confidence 4444544 33444444444445566789999999999999765432 11111 11112223366789999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC---CCCCCChHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV---LVPTGDTTAVRRT 525 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~---~~~~~D~~al~~~ 525 (760)
+||||.||+++. +|-|++.|||.+..+...... +-.-+. -..|++.+|+++.+.-.- .....|+++++=.
T Consensus 1358 RDIK~aNI~Ld~--~g~iK~~DFGsa~ki~~~~~~-~~~el~-~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCV 1430 (1509)
T KOG4645|consen 1358 RDIKPANILLDF--NGLIKYGDFGSAVKIKNNAQT-MPGELQ-SMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCV 1430 (1509)
T ss_pred cCCCccceeeec--CCcEEeecccceeEecCchhc-CCHHHH-hhcCCchhcCchhhcccccCCCCcchhhhcccce
Confidence 999999999986 789999999999998776321 111111 235889999999875322 1234577776643
No 383
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.11 E-value=4.6e-10 Score=122.05 Aligned_cols=185 Identities=16% Similarity=0.172 Sum_probs=111.0
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.+++|.|++|.||+|+. +|+.||||..++....... ...+.+|.
T Consensus 10 ~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~----------------------------------~~~~~~E~ 55 (337)
T cd07858 10 IKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRID----------------------------------AKRTLREI 55 (337)
T ss_pred EEEeccCCCeEEEEEEecCCCCeEEEEEecccccccch----------------------------------hHHHHHHH
Confidence 36899999999999998 5899999987653211100 00112343
Q ss_pred HHHHHHHHhcCCCCceeeceeeec----cCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCc
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWE----YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 449 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e----~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~Gf 449 (760)
..+..+. +...+.+..++.. .....+++|||++| .|.++.... ..+....+...+ +-..+..+|..|+
T Consensus 56 ~~l~~l~----h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i 129 (337)
T cd07858 56 KLLRHLD----HENVIAIKDIMPPPHREAFNDVYIVYELMDT-DLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSANV 129 (337)
T ss_pred HHHHhcC----CCCccchHHheecccccccCcEEEEEeCCCC-CHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 3344331 1111222221111 11346999999975 566544221 223333333222 2233678999999
Q ss_pred cccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHH
Q 004334 450 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQF 528 (760)
Q Consensus 450 fHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~ 528 (760)
+|+|++|.||+++. ++.++|+|||++........ ... ...+...+++++.... +..+...|++++.-.+.+
T Consensus 130 ~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~~~~~~~--~~~----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 201 (337)
T cd07858 130 LHRDLKPSNLLLNA--NCDLKICDFGLARTTSEKGD--FMT----EYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAE 201 (337)
T ss_pred ecCCCCHHHEEEcC--CCCEEECcCccccccCCCcc--ccc----ccccccCccChHHHhcCCCCCCcccHHHHHHHHHH
Confidence 99999999999985 78999999999887654321 000 0112334556665543 346677899999877666
Q ss_pred HH
Q 004334 529 FL 530 (760)
Q Consensus 529 ~l 530 (760)
++
T Consensus 202 l~ 203 (337)
T cd07858 202 LL 203 (337)
T ss_pred HH
Confidence 54
No 384
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.11 E-value=2.1e-10 Score=126.78 Aligned_cols=177 Identities=18% Similarity=0.145 Sum_probs=113.4
Q ss_pred cccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
+-+|.|.||.||+|.++++.||||+..+.-.+.+..+-+|+.. ...+..|+
T Consensus 216 eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~l-----------------------------p~m~h~nI 266 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSL-----------------------------PGMKHENI 266 (534)
T ss_pred HHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhc-----------------------------cCccchhH
Confidence 3589999999999999999999998766433333332222211 01123344
Q ss_pred HHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCH---HHHHHHHHHHHHHHHHh---------
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDR---KRLGRYAVESYLEQILS--------- 446 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~---~~la~~lv~~~L~qI~~--------- 446 (760)
-+|-..-+.. .....+.+||+||-+-++|.++.... -++- -+++..+++ -+..+|+
T Consensus 267 l~Fi~~ekr~---------t~~~~eywLVt~fh~kGsL~dyL~~n--tisw~~~cria~Smar-GLa~LHee~p~~d~~K 334 (534)
T KOG3653|consen 267 LQFIGAEKRG---------TADRMEYWLVTEFHPKGSLCDYLKAN--TISWNSLCRIAESMAR-GLAHLHEELPRGDHHK 334 (534)
T ss_pred HHhhchhccC---------CccccceeEEeeeccCCcHHHHHHhc--cccHHHHHHHHHHHHH-HHHHhcccCCcCCCCC
Confidence 4441111100 01122568999999999999986433 2333 334444443 2566764
Q ss_pred CCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004334 447 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 524 (760)
Q Consensus 447 ~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~ 524 (760)
.+|.|||+|..||||.. |+..+|.|||++-++++..-..=. +.-.++..+|++++++-.+--. |..+|++
T Consensus 335 p~IaHRDlkSkNVLvK~--DlTccIaDFGLAl~~~p~~~~~d~----~~qVGT~RYMAPEvLEgainl~--d~~Afkr 404 (534)
T KOG3653|consen 335 PPIAHRDLKSKNVLVKN--DLTCCIADFGLALRLEPGKPQGDT----HGQVGTRRYMAPEVLEGAINLQ--DRDAFKR 404 (534)
T ss_pred CccccccccccceEEcc--CCcEEeeccceeEEecCCCCCcch----hhhhhhhhhcCHHHHhhhcccc--cHHHHHH
Confidence 36999999999999985 999999999999999865433211 1135788999999998654332 2444443
No 385
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.09 E-value=4.6e-10 Score=122.44 Aligned_cols=122 Identities=14% Similarity=0.106 Sum_probs=74.2
Q ss_pred CeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceecc
Q 004334 403 PQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 480 (760)
Q Consensus 403 ~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l 480 (760)
..+++|||+++ .+.+.... ..+....+... .+-..+..+|..|++|+|+||+||+++. .++.++++|||++..+
T Consensus 90 ~~~lv~e~~~~-~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~-~~~~~kl~dfg~~~~~ 165 (342)
T cd07854 90 SVYIVQEYMET-DLANVLEQ--GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT-EDLVLKIGDFGLARIV 165 (342)
T ss_pred eEEEEeecccc-cHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC-CCceEEECCcccceec
Confidence 35899999986 66654422 12232222221 2223467889999999999999999974 3567999999999876
Q ss_pred ChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHHH
Q 004334 481 SPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 481 ~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~~~~l~ 531 (760)
.......- ......+...+++++...- .......|+++++-.+.+++.
T Consensus 166 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~ 214 (342)
T cd07854 166 DPHYSHKG---YLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 214 (342)
T ss_pred CCcccccc---ccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHh
Confidence 54322100 0000012334555665432 234556899999877766543
No 386
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.09 E-value=4.5e-10 Score=116.43 Aligned_cols=120 Identities=10% Similarity=0.051 Sum_probs=79.4
Q ss_pred CCeEEEEeecCCCchhhhhhh---hhcCCCHHHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecc
Q 004334 402 TPQILTMEYVPGIKINRIQSL---DELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGM 476 (760)
Q Consensus 402 t~~vLVME~ieG~~L~d~~~l---~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~ 476 (760)
+..+++|||++|.+|.++... ....++...+...+ +...+..+|..|++|+|++|.||+++ ++.++++|||.
T Consensus 75 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~---~~~~~l~d~g~ 151 (260)
T cd08222 75 DAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK---NNLLKIGDFGV 151 (260)
T ss_pred CceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee---cCCEeecccCc
Confidence 457899999999999876532 11223333322222 22346789999999999999999997 46799999998
Q ss_pred eeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 477 MGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 477 v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+..+...... .....+...+++++...........|++++...+.+++
T Consensus 152 ~~~~~~~~~~------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~ 199 (260)
T cd08222 152 SRLLMGSCDL------ATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMC 199 (260)
T ss_pred eeecCCCccc------ccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 8766433210 11123445566677665555566789999887665554
No 387
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.08 E-value=1.2e-09 Score=119.14 Aligned_cols=186 Identities=19% Similarity=0.196 Sum_probs=113.0
Q ss_pred ccccccccccEEEEEEEC---CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARLK---GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l~---G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E 374 (760)
...||.|+||+||.+... .+.+|+|+........ . ..+..|
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~----------------------------~--------~~l~~E 66 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK----------------------------P--------SVLKIE 66 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC----------------------------C--------ccchhH
Confidence 468999999999999983 3589999866521110 0 001122
Q ss_pred HHHHHHHHHhcCCCCceeeceeeecc-CC--CeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHHHHH--HHHHHHhCC
Q 004334 375 AANAELFASNFKDMDYVKVPTIFWEY-TT--PQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVES--YLEQILSHG 448 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~V~VP~vy~e~-st--~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~lv~~--~L~qI~~~G 448 (760)
...+..+.. ......+|.+++.. .+ -+++||+.+ |.+|.++..... ..+.........++. .++.+|+.|
T Consensus 67 ~~vl~~l~~---~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G 142 (322)
T KOG1164|consen 67 IQVLKKLEK---KNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG 142 (322)
T ss_pred HHHHHHHhh---hcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC
Confidence 222222222 12234678877766 23 369999988 889998764332 345555555544443 388999999
Q ss_pred ccccCCCCCcEEEeccC---CCcEEEEeeccee--ccChhhHHHHHH--HHHHHhhcCHHHHHHHHHHcCCCCCCCChHH
Q 004334 449 FFHADPHPGNIAVDDVN---GGRLIFYDFGMMG--SISPNIREGLLE--AFYGIYEKDADKVLQAMVQMGVLVPTGDTTA 521 (760)
Q Consensus 449 ffHaDpHPGNILV~~~~---~g~l~LiDFG~v~--~l~~~~r~~l~~--l~~al~~~D~~~v~~~l~~lG~~~~~~D~~a 521 (760)
|+|||+||+|+++.... ...+.++|||+++ ++.......... -..+...++..++....-...-..+..|.++
T Consensus 143 ~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles 222 (322)
T KOG1164|consen 143 FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLES 222 (322)
T ss_pred cccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhh
Confidence 99999999999997521 1469999999999 432221110000 0002334666666666555555556667766
Q ss_pred HH
Q 004334 522 VR 523 (760)
Q Consensus 522 l~ 523 (760)
+-
T Consensus 223 ~~ 224 (322)
T KOG1164|consen 223 LF 224 (322)
T ss_pred HH
Confidence 43
No 388
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.07 E-value=8.7e-10 Score=129.13 Aligned_cols=162 Identities=15% Similarity=0.214 Sum_probs=109.4
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||-|..|+||+++. +|+-+||||+.|+....-+.++ | .
T Consensus 25 evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~-------------------------------------e-y 66 (953)
T KOG0587|consen 25 EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIEL-------------------------------------E-Y 66 (953)
T ss_pred EEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHH-------------------------------------H-H
Confidence 3688899999998887 6999999999996543311111 1 1
Q ss_pred HHHHHHHhcCCCCceeeceeee-----ccCCCeEEEEeecCCCchhhhhhhh-hcCCCHHHHHHHHHHHH--HHHHHhCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFW-----EYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAVESY--LEQILSHG 448 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~-----e~st~~vLVME~ieG~~L~d~~~l~-~~g~d~~~la~~lv~~~--L~qI~~~G 448 (760)
|+-++ ..+++++..-.-+. .-..+.+||||||.|++++|+.... ....+...+|..+.+.+ +..+|...
T Consensus 67 nil~~---~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk 143 (953)
T KOG0587|consen 67 NMLKK---YSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK 143 (953)
T ss_pred HHHHh---ccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc
Confidence 22222 22333322211111 2346789999999999999976432 22344556666665555 55567778
Q ss_pred ccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH
Q 004334 449 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ 509 (760)
Q Consensus 449 ffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~ 509 (760)
++|+|++-.|||++. +|.++|+|||...+++....+. ...-+.+-.|+++.+.
T Consensus 144 viHRDikG~NiLLT~--e~~VKLvDFGvSaQldsT~grR------nT~iGtP~WMAPEVia 196 (953)
T KOG0587|consen 144 VIHRDIKGQNVLLTE--NAEVKLVDFGVSAQLDSTVGRR------NTFIGTPYWMAPEVIA 196 (953)
T ss_pred eeeecccCceEEEec--cCcEEEeeeeeeeeeecccccc------cCcCCCcccccceeee
Confidence 999999999999996 8999999999999998764432 2234666677776654
No 389
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.07 E-value=4e-10 Score=127.99 Aligned_cols=182 Identities=18% Similarity=0.192 Sum_probs=124.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..||+|.||.|..|++ +|.+||||+....-- +... ...+.+|.+
T Consensus 62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l-----------------------------n~~~-----~~k~~rev~ 107 (596)
T KOG0586|consen 62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL-----------------------------NPSK-----RQKLGREVD 107 (596)
T ss_pred eeeccceeEEEEeeEecCCCceEEEEEehhccc-----------------------------ChHH-----HHHHHHHHH
Confidence 5799999999999999 799999997544110 0000 011334545
Q ss_pred HHHHHHHhcCCCCc-eeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH---HHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA---VESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~-V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l---v~~~L~qI~~~GffHa 452 (760)
.|..+ ++|+ |.+-.|+ +.....+|||||+.|+.+.++.. ..+-+....++.. +-..++.+|.++|+|+
T Consensus 108 imk~l-----~HPnIvkl~~v~-~t~~~lylV~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHr 179 (596)
T KOG0586|consen 108 IMKSL-----NHPNIVKLFSVI-ETEATLYLVMEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSKNIVHR 179 (596)
T ss_pred HHHhc-----CCcceeeeeeee-eecceeEEEEEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhcceecc
Confidence 55444 3333 3444444 33455799999999999988653 2333333333332 2344788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCChHHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~-lG~~~~~~D~~al~~~~~~~l~ 531 (760)
|||..||+++. +-.+++.|||+...++... + ..-.-+.+.++++++.. .....|..|.+.++..++-++.
T Consensus 180 dLk~eNilL~~--~mnikIaDfgfS~~~~~~~---~----lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~ 250 (596)
T KOG0586|consen 180 DLKAENILLDE--NMNIKIADFGFSTFFDYGL---M----LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVE 250 (596)
T ss_pred ccchhhccccc--ccceeeeccccceeecccc---c----ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeee
Confidence 99999999985 5679999999999987542 2 22234677888887764 4567888999999887766544
No 390
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.06 E-value=9.9e-10 Score=122.03 Aligned_cols=184 Identities=18% Similarity=0.205 Sum_probs=122.2
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHH-HHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDEC-ASVLYQE 374 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~-~~~l~~E 374 (760)
++.||.|-|+.|-.|++ +|+.|||||...-- +|+. ...+.+|
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTK-----------------------------------lD~~st~hlfqE 67 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTK-----------------------------------LDTLSTGHLFQE 67 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEecccc-----------------------------------cchhhhhHHHHH
Confidence 46899999999999998 89999999964310 0111 2245667
Q ss_pred HHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHH---HHHHHhCCccc
Q 004334 375 AANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESY---LEQILSHGFFH 451 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~---L~qI~~~GffH 451 (760)
.+-|+.. .+.+-|...+|+ +-.|+.||+.|.=+|+.|.|++--...|+.. .+++.-...+ +.+.|...++|
T Consensus 68 VRCMKLV----QHpNiVRLYEVi-DTQTKlyLiLELGD~GDl~DyImKHe~Gl~E-~La~kYF~QI~~AI~YCHqLHVVH 141 (864)
T KOG4717|consen 68 VRCMKLV----QHPNIVRLYEVI-DTQTKLYLILELGDGGDLFDYIMKHEEGLNE-DLAKKYFAQIVHAISYCHQLHVVH 141 (864)
T ss_pred HHHHHHh----cCcCeeeeeehh-cccceEEEEEEecCCchHHHHHHhhhccccH-HHHHHHHHHHHHHHHHHhhhhhhc
Confidence 6666654 344445555555 3457889999999999999987544445432 2222221111 23345677999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHH-HHHcCCCCCCCChHHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQA-MVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~-l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
+|+||.|+.+-+ .-|-++|.|||+.-.+.|..+- ..+. +.-.+-+++ ++.-.+-.|.+|+|.+..+++.++
T Consensus 142 RDLKPENVVFFE-KlGlVKLTDFGFSNkf~PG~kL---~TsC----GSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLV 213 (864)
T KOG4717|consen 142 RDLKPENVVFFE-KLGLVKLTDFGFSNKFQPGKKL---TTSC----GSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLV 213 (864)
T ss_pred ccCCcceeEEee-ecCceEeeeccccccCCCcchh---hccc----chhhccCchhhhcCccCCcchhhhHHHHHHHHHH
Confidence 999999997764 4788999999999988876552 1222 233333343 333345567889999998776554
No 391
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.04 E-value=2.8e-10 Score=130.04 Aligned_cols=187 Identities=17% Similarity=0.166 Sum_probs=127.3
Q ss_pred cccccccccEEEEEEEC---C--eeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK---G--EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~---G--~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~ 373 (760)
+-||.||||.||+|.++ | -.||||+.+++.... + ...+.+
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-------------------------------~----mddflr 160 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-------------------------------I----MDDFLR 160 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-------------------------------h----HHHHHH
Confidence 35999999999999993 5 479999999864322 1 123467
Q ss_pred HHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhh-hhcCCCHHHHHHHHHH--HHHHHHHhCCcc
Q 004334 374 EAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVE--SYLEQILSHGFF 450 (760)
Q Consensus 374 EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l-~~~g~d~~~la~~lv~--~~L~qI~~~Gff 450 (760)
|+..|-++. |...|+...|+ +.....||||.+++++|-|.+.. ....+.-..+.....+ ..+.++-..+++
T Consensus 161 Eas~M~~L~----H~hliRLyGvV--l~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlv 234 (1039)
T KOG0199|consen 161 EASHMLKLQ----HPHLIRLYGVV--LDQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLV 234 (1039)
T ss_pred HHHHHHhcc----CcceeEEeeee--ccchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 777777663 33334444444 34667899999999999886543 1222222333333222 235556679999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|+|+-.-|+++-. ...++++|||+++.+...+-.. .+..-..=-+..++++.++.+..+...|++.+...+-+++
T Consensus 235 HRDLAARNlllas--prtVKI~DFGLmRaLg~ned~Y---vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMF 309 (1039)
T KOG0199|consen 235 HRDLAARNLLLAS--PRTVKICDFGLMRALGENEDMY---VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMF 309 (1039)
T ss_pred hhhhhhhhheecc--cceeeeecccceeccCCCCcce---EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhh
Confidence 9999999999975 5689999999999998754322 1111011235678899999988888999999998776655
Q ss_pred H
Q 004334 531 N 531 (760)
Q Consensus 531 ~ 531 (760)
.
T Consensus 310 t 310 (1039)
T KOG0199|consen 310 T 310 (1039)
T ss_pred c
Confidence 3
No 392
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.04 E-value=1.3e-09 Score=118.07 Aligned_cols=150 Identities=13% Similarity=0.137 Sum_probs=91.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHH--HHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYD--ECASVLYQE 374 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~--E~~~~l~~E 374 (760)
+.||.|++|.||+|+. +|+.||||+.+.......... ....+. .+...+.+|
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~E 70 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTK------------------------DRQLVGMCGIHFTTLRE 70 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeecccccccccc------------------------chhhhcccccchhHHHH
Confidence 4699999999999998 589999998764311110000 000000 011123455
Q ss_pred HHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcccc
Q 004334 375 AANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHA 452 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHa 452 (760)
...+.++. +...+.+...+ ......+++|||++| .+.++... ............+ +-..+..+|..|++|+
T Consensus 71 ~~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~ 143 (335)
T PTZ00024 71 LKIMNEIK----HENIMGLVDVY-VEGDFINLVMDIMAS-DLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKWYFMHR 143 (335)
T ss_pred HHHHHhCC----CcceeeeeEEE-ecCCcEEEEEecccc-CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 55555542 22222333322 234567999999987 56665422 1123333322222 2234778999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccC
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSIS 481 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~ 481 (760)
|++|+||+++. ++.++|+|||++..+.
T Consensus 144 dl~~~nill~~--~~~~kl~dfg~~~~~~ 170 (335)
T PTZ00024 144 DLSPANIFINS--KGICKIADFGLARRYG 170 (335)
T ss_pred cccHHHeEECC--CCCEEECCccceeecc
Confidence 99999999985 7899999999998765
No 393
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.04 E-value=8.7e-10 Score=117.56 Aligned_cols=142 Identities=18% Similarity=0.270 Sum_probs=100.7
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.||||..+.|+. ++++||||.-.. +.+-+.+-+|+ +
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPr------------------------------kS~APQLrdEY--------r 75 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPR------------------------------KSEAPQLRDEY--------R 75 (449)
T ss_pred cccccCcceeeecccccccCceEEEEeccc------------------------------cCCcchHHHHH--------H
Confidence 5799999999999997 899999995211 11223333443 2
Q ss_pred HHHHHHHhcCCCCceeeceeeec--cCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHH--HHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESY--LEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e--~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~--L~qI~~~GffHa 452 (760)
+.+.+.. ...||.||.- -.-.++||||.+ |.+|.|+..+....+..+.++...+... ++.+|.+.++.+
T Consensus 76 ----~YKlL~g--~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYR 148 (449)
T KOG1165|consen 76 ----TYKLLGG--TEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYR 148 (449)
T ss_pred ----HHHHHcC--CCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeec
Confidence 3333333 3467888741 223569999998 8999998877766677776655544433 677999999999
Q ss_pred CCCCCcEEEeccC---CCcEEEEeecceecc-ChhhH
Q 004334 453 DPHPGNIAVDDVN---GGRLIFYDFGMMGSI-SPNIR 485 (760)
Q Consensus 453 DpHPGNILV~~~~---~g~l~LiDFG~v~~l-~~~~r 485 (760)
|+||.|+||..+. ...|.++||||++.+ +++++
T Consensus 149 DIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~Tk 185 (449)
T KOG1165|consen 149 DIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTK 185 (449)
T ss_pred ccCccceeecCCCCCCCceEEEEeccchhhhcCcccc
Confidence 9999999997522 235999999999976 44443
No 394
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.03 E-value=3.5e-10 Score=115.25 Aligned_cols=227 Identities=16% Similarity=0.187 Sum_probs=133.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..+|.|.++.|+.|.. +.+.++||+.+|--.+.|.+++.||..+..- .+...+++-.
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg------------~NIi~L~DiV--------- 102 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGG------------PNIIKLLDIV--------- 102 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCC------------CCeeehhhhh---------
Confidence 5799999999999996 7899999999998788888888877765420 0111111111
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHP 456 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDpHP 456 (760)
.+| .|....|+.||++......+-.. -...|...-...++ ..|...|+.|++|+|.||
T Consensus 103 ----------~Dp----------~SktpaLiFE~v~n~Dfk~ly~t-l~d~dIryY~~elL-kALdyCHS~GImHRDVKP 160 (338)
T KOG0668|consen 103 ----------KDP----------ESKTPSLIFEYVNNTDFKQLYPT-LTDYDIRYYIYELL-KALDYCHSMGIMHRDVKP 160 (338)
T ss_pred ----------cCc----------cccCchhHhhhhccccHHHHhhh-hchhhHHHHHHHHH-HHHhHHHhcCcccccCCc
Confidence 011 22334588889888765553211 01112222222222 336778999999999999
Q ss_pred CcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHHHHH
Q 004334 457 GNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEER 536 (760)
Q Consensus 457 GNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~~~~~~ 536 (760)
.|++|+. ...++.|||||++-.+-+..-.+..-. +=.-+-++ .+.+.....-..|+++++-.+..++-.-
T Consensus 161 hNvmIdh-~~rkLrlIDWGLAEFYHp~~eYnVRVA--SRyfKGPE----LLVdy~~YDYSLD~WS~GcmlA~miFrk--- 230 (338)
T KOG0668|consen 161 HNVMIDH-ELRKLRLIDWGLAEFYHPGKEYNVRVA--SRYFKGPE----LLVDYQMYDYSLDMWSLGCMLASMIFRK--- 230 (338)
T ss_pred ceeeech-hhceeeeeecchHhhcCCCceeeeeee--hhhcCCch----heeechhccccHHHHHHHHHHHHHHhcc---
Confidence 9999986 457899999999988877643322100 00112232 2333333344568888775544433110
Q ss_pred HHHHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHH--HHHHHHHhhCCCcCCchhhhhh
Q 004334 537 LAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIG--EDLLAIAADQPFRFPATFTFVV 596 (760)
Q Consensus 537 l~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~--~~l~~l~~~~~i~lP~~~~~l~ 596 (760)
+.-|. .-+... +-.+++.++ .++..-..+|++.+||.|--++
T Consensus 231 -------------epFFh-G~dN~D----QLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~ 274 (338)
T KOG0668|consen 231 -------------EPFFH-GHDNYD----QLVKIAKVLGTDELYAYLNKYQIDLDPQFEDIL 274 (338)
T ss_pred -------------CcccC-CCCCHH----HHHHHHHHhChHHHHHHHHHHccCCChhHhhHh
Confidence 11111 111111 123444444 4677888888888888776544
No 395
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.03 E-value=6e-10 Score=127.18 Aligned_cols=178 Identities=19% Similarity=0.205 Sum_probs=116.4
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
-+|.||++.|+++.+ +++..+||++.-...+. . +|...
T Consensus 329 ~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~-~---------------------------------------~e~~~ 368 (612)
T KOG0603|consen 329 ELGEGSFSAVKYCESSPTDQEPAVKIISKRADDN-Q---------------------------------------DEIPI 368 (612)
T ss_pred ccCCCCccceeeeeccccccchhheecccccccc-c---------------------------------------cccch
Confidence 499999999999999 68999999864320000 0 00000
Q ss_pred HHHHHHhcCCCCc-eeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHHHHHHHHHHHhCCccccCCC
Q 004334 378 AELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVESYLEQILSHGFFHADPH 455 (760)
Q Consensus 378 l~~f~~~~~~~~~-V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~lv~~~L~qI~~~GffHaDpH 455 (760)
+.+ ..++++ +..-.++ +.....++|||.+.|.-+-+-..... .......++..++ .++..+|.+|++|||+|
T Consensus 369 ~~~----~~~h~niv~~~~v~-~~~~~~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv-~Av~~LH~~gvvhRDLk 442 (612)
T KOG0603|consen 369 SLL----VRDHPNIVKSHDVY-EDGKEIYLVMELLDGGELLRRIRSKPEFCSEASQWAAELV-SAVDYLHEQGVVHRDLK 442 (612)
T ss_pred hhh----hcCCCcceeeccee-cCCceeeeeehhccccHHHHHHHhcchhHHHHHHHHHHHH-HHHHHHHhcCeeecCCC
Confidence 111 112222 2333333 33456799999999987766332221 1111222333333 45788999999999999
Q ss_pred CCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHH
Q 004334 456 PGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSF 533 (760)
Q Consensus 456 PGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~~~ 533 (760)
|+|||+.+ ..|.|.|+|||....+.++ +. .- .-+-.++++++...--.++..|.|+++..++.|+..+
T Consensus 443 p~NIL~~~-~~g~lrltyFG~a~~~~~~----~~---tp--~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~ 510 (612)
T KOG0603|consen 443 PGNILLDG-SAGHLRLTYFGFWSELERS----CD---TP--ALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGR 510 (612)
T ss_pred hhheeecC-CCCcEEEEEechhhhCchh----hc---cc--chhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCC
Confidence 99999952 4789999999999998776 10 00 1144667888877666688899999999998887653
No 396
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.03 E-value=5.2e-10 Score=118.67 Aligned_cols=191 Identities=17% Similarity=0.182 Sum_probs=128.5
Q ss_pred cccCc-cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHH
Q 004334 294 ERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 370 (760)
Q Consensus 294 ~~fd~-~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~ 370 (760)
++||- +.+|.|.||.|-.++- +|+.+|+||.+.++- |.. +|.+..
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKevi--iak------------------------------dEVAHT 215 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVI--IAK------------------------------DEVAHT 215 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhhe--eeh------------------------------HHhhhh
Confidence 34553 6899999999999998 699999998776431 111 222222
Q ss_pred HHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhh-hhhhhhcCCCHHHHHHHHHHHHHHHHHhCCc
Q 004334 371 LYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINR-IQSLDELGVDRKRLGRYAVESYLEQILSHGF 449 (760)
Q Consensus 371 l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d-~~~l~~~g~d~~~la~~lv~~~L~qI~~~Gf 449 (760)
+ -|-+-+...+ +|.+.--+.-.+-..+.+.||||..|+.|.- +..-+-...++.+.-..-+-..|..+|..++
T Consensus 216 l-TE~RVL~~~~-----HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~i 289 (516)
T KOG0690|consen 216 L-TENRVLQNCR-----HPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNI 289 (516)
T ss_pred h-hHHHHHHhcc-----CcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCe
Confidence 1 2222222221 1111111111122345699999999998863 3233334456666666666677999999999
Q ss_pred cccCCCCCcEEEeccCCCcEEEEeecceec-cChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004334 450 FHADPHPGNIAVDDVNGGRLIFYDFGMMGS-ISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 528 (760)
Q Consensus 450 fHaDpHPGNILV~~~~~g~l~LiDFG~v~~-l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~ 528 (760)
+.+|+|-.|+|++. ||.|++.|||+++. ++.... ...+.+.++++++++++-.-....+|-+.+...+++
T Consensus 290 vYRDlKLENLlLDk--DGHIKitDFGLCKE~I~~g~t-------~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYE 360 (516)
T KOG0690|consen 290 VYRDLKLENLLLDK--DGHIKITDFGLCKEEIKYGDT-------TKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYE 360 (516)
T ss_pred eeeechhhhheecc--CCceEeeecccchhcccccce-------eccccCChhhcCchhhccccccceeehhhhhHHHHH
Confidence 99999999999986 99999999999975 222111 122458999999999987767778899999888777
Q ss_pred HHH
Q 004334 529 FLN 531 (760)
Q Consensus 529 ~l~ 531 (760)
++-
T Consensus 361 MmC 363 (516)
T KOG0690|consen 361 MMC 363 (516)
T ss_pred HHh
Confidence 653
No 397
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.02 E-value=4.7e-09 Score=104.69 Aligned_cols=147 Identities=20% Similarity=0.263 Sum_probs=102.9
Q ss_pred CccccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 297 DVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 297 d~~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+..++-.|.-|.|+++...|+..+||-..|.-...-..|.++ ......+||+
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kL----------------------------tr~Rt~~Ear 62 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKL----------------------------TRKRTKQEAR 62 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHH----------------------------HHHHHHHHHH
Confidence 356888899999999999999999997655433332222211 1234568999
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCC-chhhhhh-hhhcCCCHH---HHHHHHHHHHHHHHHhCCccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGI-KINRIQS-LDELGVDRK---RLGRYAVESYLEQILSHGFFH 451 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~-~L~d~~~-l~~~g~d~~---~la~~lv~~~L~qI~~~GffH 451 (760)
.+.+++.. .+.+|.+|........|.|||++|. ++.++.. ......+.. .+++ -+...+.-+|..+++|
T Consensus 63 ~l~k~~~~-----GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~-~iG~~igklH~ndiiH 136 (229)
T KOG3087|consen 63 LLAKCRAL-----GIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELAR-RIGELIGKLHDNDIIH 136 (229)
T ss_pred HHHHHHHh-----CCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHH-HHHHHHHHhhhCCeec
Confidence 99998653 6899999987778889999999994 4445332 222222222 2222 2334467789999999
Q ss_pred cCCCCCcEEEeccCCCc--EEEEeeccee
Q 004334 452 ADPHPGNIAVDDVNGGR--LIFYDFGMMG 478 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~--l~LiDFG~v~ 478 (760)
+|+...||++.+ ++++ +.++|||+..
T Consensus 137 GDLTTSNill~~-~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 137 GDLTTSNILLRS-DGNQITPILIDFGLSS 164 (229)
T ss_pred ccccccceEEec-CCCcCceEEEeecchh
Confidence 999999999986 3445 4999999864
No 398
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.02 E-value=1.7e-09 Score=121.50 Aligned_cols=183 Identities=17% Similarity=0.203 Sum_probs=117.9
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
+-||+|+-..||++.- +.+.+|+|-..-. . .| +.....+.+|...
T Consensus 367 k~iG~GGSSkV~kV~~s~~~iyalkkv~~~--------------------~---------~D-----~qtl~gy~nEI~l 412 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNSDKQIYALKKVVLL--------------------E---------AD-----NQTLDGYRNEIAL 412 (677)
T ss_pred HhhcCCCcceeeeeecCCCcchhhhHHHHh--------------------h---------cC-----HHHHHHHHHHHHH
Confidence 5799999999999998 4566666621000 0 00 1223456788888
Q ss_pred HHHHHHhcCCCCceeeceeee-cc-CCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHH---HHHHHHHHHHHhCCcccc
Q 004334 378 AELFASNFKDMDYVKVPTIFW-EY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGR---YAVESYLEQILSHGFFHA 452 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~-e~-st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~---~lv~~~L~qI~~~GffHa 452 (760)
+.+|..+ ..|-+.|. +. .+-.||||||=+ ..|+.++..... .++..... .-+-.+++.+|.+|++|.
T Consensus 413 L~KLkg~------~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k~~~-~~~~~~lk~ywkqML~aV~~IH~~gIVHS 484 (677)
T KOG0596|consen 413 LNKLKGH------DKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKKKKS-IDPDWFLKFYWKQMLLAVKTIHQHGIVHS 484 (677)
T ss_pred HHHhcCC------ceEEEEeeeeccCceEEEEeeccc-ccHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHhceeec
Confidence 8888543 34455553 22 345699999843 567776543322 22211111 122234667899999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH-HcCC----------CCCCCChHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV-QMGV----------LVPTGDTTA 521 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~-~lG~----------~~~~~D~~a 521 (760)
|+||.|+++- .|.++|||||++..+.+++..-+.+- ..|+..+|.++.+ ++.. +.+..|+|+
T Consensus 485 DLKPANFLlV---kG~LKLIDFGIA~aI~~DTTsI~kds----QvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWS 557 (677)
T KOG0596|consen 485 DLKPANFLLV---KGRLKLIDFGIANAIQPDTTSIVKDS----QVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWS 557 (677)
T ss_pred CCCcccEEEE---eeeEEeeeechhcccCccccceeecc----ccCcccccCHHHHhhccccccCCCcceeecCccchhh
Confidence 9999999987 69999999999999988765433222 2356677766543 3321 456789999
Q ss_pred HHHHHHHHH
Q 004334 522 VRRTAQFFL 530 (760)
Q Consensus 522 l~~~~~~~l 530 (760)
++=+++.|+
T Consensus 558 LGCILYqMv 566 (677)
T KOG0596|consen 558 LGCILYQMV 566 (677)
T ss_pred hhhHHHHHH
Confidence 998887775
No 399
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.01 E-value=2e-10 Score=119.33 Aligned_cols=87 Identities=17% Similarity=0.177 Sum_probs=64.4
Q ss_pred HHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCh
Q 004334 440 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDT 519 (760)
Q Consensus 440 ~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~ 519 (760)
-++.+|..|+.|+|+||||++|+. +--++++|||+++.-+.+++..+..-+..- +....+.+...--.+...|+
T Consensus 168 GLKYLHsA~ILHRDIKPGNLLVNS--NCvLKICDFGLARvee~d~~~hMTqEVVTQ----YYRAPEiLMGaRhYs~AvDi 241 (449)
T KOG0664|consen 168 GLKYLHTANILHRDIKPGNLLVNS--NCILKICDFGLARTWDQRDRLNMTHEVVTQ----YYRAPELLMGARRYTGAVDI 241 (449)
T ss_pred hhHHHhhcchhhccCCCccEEecc--CceEEecccccccccchhhhhhhHHHHHHH----HhccHHHhhcchhhcCccce
Confidence 478899999999999999999985 778999999999998888887766544432 33333334333344567799
Q ss_pred HHHHHHHHHHHHH
Q 004334 520 TAVRRTAQFFLNS 532 (760)
Q Consensus 520 ~al~~~~~~~l~~ 532 (760)
++++=+..+++.+
T Consensus 242 WSVGCIFaELLgR 254 (449)
T KOG0664|consen 242 WSVGCIFAELLQR 254 (449)
T ss_pred ehhhHHHHHHHhh
Confidence 9988776666543
No 400
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.00 E-value=1.4e-09 Score=113.20 Aligned_cols=199 Identities=17% Similarity=0.224 Sum_probs=132.6
Q ss_pred hhhhcccCc-cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHH
Q 004334 290 DDVFERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDE 366 (760)
Q Consensus 290 ~~iF~~fd~-~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E 366 (760)
.+.|..+++ +-+|.|..+.|-|+.. +|.+.|+|+.--..... ...+ ..+
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~------------------------~~e~----~~~ 64 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTE------------------------SGET----PYE 64 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEeccccc------------------------CCcc----HHH
Confidence 345666665 6789999999999988 58899999764321111 0001 233
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCce-eeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCC---HHHHHHHHHHHHHH
Q 004334 367 CASVLYQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVD---RKRLGRYAVESYLE 442 (760)
Q Consensus 367 ~~~~l~~EA~nl~~f~~~~~~~~~V-~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d---~~~la~~lv~~~L~ 442 (760)
..+..++|...+++. ..+|++ .+-.+| +-.+-.+||.|.++-+.|.|+....- .++ ...+++.+.+. ..
T Consensus 65 ~~EaT~~Ev~ILRqv----~GHP~II~l~D~y-es~sF~FlVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfeg-Ve 137 (411)
T KOG0599|consen 65 MREATRQEISILRQV----MGHPYIIDLQDVY-ESDAFVFLVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEG-VE 137 (411)
T ss_pred HHHHHHHHHHHHHHh----cCCCcEEEeeeec-cCcchhhhhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHH-HH
Confidence 333445666666554 344443 333333 44555689999999999999764221 112 22344444332 56
Q ss_pred HHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC------CCC
Q 004334 443 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL------VPT 516 (760)
Q Consensus 443 qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~------~~~ 516 (760)
.+|..+++|+|+||.|||+++ +.+|++.|||.+.++.+..+ +.+ +.+++.+++++.++-... +..
T Consensus 138 ylHa~~IVHRDLKpENILldd--n~~i~isDFGFa~~l~~Gek--Lre-----lCGTPgYLAPEtikC~m~e~~pGYs~E 208 (411)
T KOG0599|consen 138 YLHARNIVHRDLKPENILLDD--NMNIKISDFGFACQLEPGEK--LRE-----LCGTPGYLAPETIKCSMYENHPGYSKE 208 (411)
T ss_pred HHHHhhhhhcccChhheeecc--ccceEEeccceeeccCCchh--HHH-----hcCCCcccChhheeeecccCCCCccch
Confidence 688999999999999999986 78999999999999998765 222 358999999988764322 345
Q ss_pred CChHHHHHHHHHHHHH
Q 004334 517 GDTTAVRRTAQFFLNS 532 (760)
Q Consensus 517 ~D~~al~~~~~~~l~~ 532 (760)
.|.++.+.+++-++..
T Consensus 209 VD~Wa~GVImyTLLaG 224 (411)
T KOG0599|consen 209 VDEWACGVIMYTLLAG 224 (411)
T ss_pred hhHHHHHHHHHHHHcC
Confidence 6899998877766654
No 401
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.00 E-value=2.5e-09 Score=132.47 Aligned_cols=174 Identities=14% Similarity=0.154 Sum_probs=109.6
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
.+.||.|++|.||+|+. +|+.||||..+...... ..|.
T Consensus 695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~ 734 (968)
T PLN00113 695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP----------------------------------------SSEI 734 (968)
T ss_pred ccEEccCCCeeEEEEEECCCCcEEEEEEccCCcccc----------------------------------------HHHH
Confidence 46899999999999998 68999999754310000 0112
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCC-HHHHHHHHHHHHHHHHH---hCCccc
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVD-RKRLGRYAVESYLEQIL---SHGFFH 451 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d-~~~la~~lv~~~L~qI~---~~GffH 451 (760)
+.+.++ .|..-|.+..++ ......++||||++|++|.++.. ..... +..++.. +...+..+| ..+++|
T Consensus 735 ~~l~~l----~HpnIv~~~~~~-~~~~~~~lv~Ey~~~g~L~~~l~--~l~~~~~~~i~~~-ia~~L~yLH~~~~~~iiH 806 (968)
T PLN00113 735 ADMGKL----QHPNIVKLIGLC-RSEKGAYLIHEYIEGKNLSEVLR--NLSWERRRKIAIG-IAKALRFLHCRCSPAVVV 806 (968)
T ss_pred HHHhhC----CCCCcceEEEEE-EcCCCCEEEEeCCCCCcHHHHHh--cCCHHHHHHHHHH-HHHHHHHhccCCCCCeec
Confidence 222222 232233333333 23356799999999999998753 11111 2233333 334467788 569999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+|+||.||+++. ++..++ +||..+....... ..+.+.+++++....+..+...|+++++..+.+++.
T Consensus 807 ~dlkp~Nil~~~--~~~~~~-~~~~~~~~~~~~~----------~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~t 873 (968)
T PLN00113 807 GNLSPEKIIIDG--KDEPHL-RLSLPGLLCTDTK----------CFISSAYVAPETRETKDITEKSDIYGFGLILIELLT 873 (968)
T ss_pred CCCCHHhEEECC--CCceEE-EeccccccccCCC----------ccccccccCcccccCCCCCcccchhhHHHHHHHHHh
Confidence 999999999985 444333 3665544322211 123567888888777777888999999988877765
Q ss_pred H
Q 004334 532 S 532 (760)
Q Consensus 532 ~ 532 (760)
.
T Consensus 874 g 874 (968)
T PLN00113 874 G 874 (968)
T ss_pred C
Confidence 3
No 402
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.00 E-value=2.9e-10 Score=136.68 Aligned_cols=129 Identities=19% Similarity=0.169 Sum_probs=85.3
Q ss_pred eEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHH---HHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceecc
Q 004334 404 QILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES---YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 480 (760)
Q Consensus 404 ~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~---~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l 480 (760)
.|+-||||+-..+.++..-....-++ ..+..+.+. .+.+||..|++|||+||.|||+++ ++.++|.|||++..+
T Consensus 671 LYIQMEyCE~~ll~~iI~~N~~~~~~-d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~--~~~VKIGDFGLAt~~ 747 (1351)
T KOG1035|consen 671 LYIQMEYCEKTLLRDIIRRNHFNSQR-DEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDS--RNSVKIGDFGLATDL 747 (1351)
T ss_pred EEEEHhhhhhhHHHHHHHhcccchhh-HHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcC--CCCeeecccccchhh
Confidence 58999999998888876543332122 223333332 367899999999999999999985 789999999999874
Q ss_pred ChhhHHHHHHH-HHHH-----------hhcCHHHHHHHHHHcC---CCCCCCChHHHHHHHHHHHHHHHH
Q 004334 481 SPNIREGLLEA-FYGI-----------YEKDADKVLQAMVQMG---VLVPTGDTTAVRRTAQFFLNSFEE 535 (760)
Q Consensus 481 ~~~~r~~l~~l-~~al-----------~~~D~~~v~~~l~~lG---~~~~~~D~~al~~~~~~~l~~~~~ 535 (760)
-.......... +... .-|+.-|+++++..-- ..+.+.|+++++-.+-+|+-+|..
T Consensus 748 ~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~T 817 (1351)
T KOG1035|consen 748 KENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGT 817 (1351)
T ss_pred hhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhccCCc
Confidence 32111111000 0011 1234557888877643 356788999999888777766643
No 403
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.98 E-value=2.2e-09 Score=114.16 Aligned_cols=243 Identities=18% Similarity=0.256 Sum_probs=153.1
Q ss_pred hcccCc-cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHH
Q 004334 293 FERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECAS 369 (760)
Q Consensus 293 F~~fd~-~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~ 369 (760)
...|+. ..||.||++.|-.+++ +.+-+|+||.+..... +....||+..-...
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~n-----------------------ddedidwvqtek~v-- 303 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVN-----------------------DDEDIDWVQTEKHV-- 303 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcC-----------------------CcccchhHHhhHHH--
Confidence 345664 7899999999999999 5789999987653211 11224565432211
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhh-hhhhhhcCCCHHHHHHHHHHHHHHHHHhCC
Q 004334 370 VLYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINR-IQSLDELGVDRKRLGRYAVESYLEQILSHG 448 (760)
Q Consensus 370 ~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d-~~~l~~~g~d~~~la~~lv~~~L~qI~~~G 448 (760)
-+.-.++|.+.=-.....-.++.+.|.||++|+.|.= ....++...+..+.-..-+...+..+|+.|
T Consensus 304 ------------fe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rg 371 (593)
T KOG0695|consen 304 ------------FEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERG 371 (593)
T ss_pred ------------HHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcC
Confidence 1111233322211111223456799999999998753 333333333334444445666789999999
Q ss_pred ccccCCCCCcEEEeccCCCcEEEEeecceec-cChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004334 449 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGS-ISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 527 (760)
Q Consensus 449 ffHaDpHPGNILV~~~~~g~l~LiDFG~v~~-l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~ 527 (760)
++.+|+|-.|+|++. .|.|+|.|+||++. +.+.+. ...+.+++.++++++++-.-..-.+|-+++...+.
T Consensus 372 iiyrdlkldnvllda--eghikltdygmcke~l~~gd~-------tstfcgtpnyiapeilrgeeygfsvdwwalgvlmf 442 (593)
T KOG0695|consen 372 IIYRDLKLDNVLLDA--EGHIKLTDYGMCKEGLGPGDT-------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMF 442 (593)
T ss_pred eeeeeccccceEEcc--CCceeecccchhhcCCCCCcc-------cccccCCCcccchhhhcccccCceehHHHHHHHHH
Confidence 999999999999986 89999999999975 333221 12345799999999998666666789999987654
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCchhhhhhhhhhhHHhhhc
Q 004334 528 FFLNSFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGK 607 (760)
Q Consensus 528 ~~l~~~~~~l~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~~l~Ral~~lEGi~~ 607 (760)
+++.. |. +.+-.+..+|- .+.. .-++++..+..+++|+.+. +|+..+|.|...
T Consensus 443 emmag--------rs----pfdivgm~n~d----------~nte---dylfqvilekqiriprsls--vkas~vlkgfln 495 (593)
T KOG0695|consen 443 EMMAG--------RS----PFDIVGMDNPD----------MNTE---DYLFQVILEKQIRIPRSLS--VKASHVLKGFLN 495 (593)
T ss_pred HHHcC--------CC----CcceecCCCcc----------cchh---HHHHHHHhhhcccccceee--hhhHHHHHHhhc
Confidence 44321 10 00011111110 1111 2356777788999999854 788888888765
Q ss_pred c
Q 004334 608 G 608 (760)
Q Consensus 608 ~ 608 (760)
.
T Consensus 496 k 496 (593)
T KOG0695|consen 496 K 496 (593)
T ss_pred C
Confidence 3
No 404
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=98.97 E-value=4.2e-09 Score=116.06 Aligned_cols=186 Identities=18% Similarity=0.213 Sum_probs=133.0
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..+|-|+||.||-++- +|+-+|.|.... +- +.+ ..-...-.+|..
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL~K----------KR-------iKk----------------r~ge~maLnEk~ 237 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKLDK----------KR-------IKK----------------RKGETMALNEKQ 237 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHHHH----------HH-------HHH----------------hhhhHHhhHHHH
Confidence 5799999999999887 688888773211 00 000 001122346677
Q ss_pred HHHHHHHhcCCCCceeeceee-eccCCCeEEEEeecCCCchhh-hhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIF-WEYTTPQILTMEYVPGIKINR-IQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy-~e~st~~vLVME~ieG~~L~d-~~~l~~~g~d~~~la~~--lv~~~L~qI~~~GffHa 452 (760)
++++....| | |--.| .+-.+..+|||+.|.|+.|.= +-.....|++..+..=. -+-.-|..+|..+++.+
T Consensus 238 iL~kV~s~F-----i-VslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYR 311 (591)
T KOG0986|consen 238 ILEKVSSPF-----I-VSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYR 311 (591)
T ss_pred HHHHhccCc-----E-EEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeec
Confidence 777764322 2 22223 244567799999999998863 33344456765554333 33345888999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNS 532 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~~ 532 (760)
|+||.|||+++ .|.+.+.|.|++..+++.... +--.++..+|++++++-+..+-..|-+++.=.+++++..
T Consensus 312 DLKPeNILLDd--~GhvRISDLGLAvei~~g~~~-------~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G 382 (591)
T KOG0986|consen 312 DLKPENILLDD--HGHVRISDLGLAVEIPEGKPI-------RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAG 382 (591)
T ss_pred cCChhheeecc--CCCeEeeccceEEecCCCCcc-------ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcc
Confidence 99999999996 899999999999999887652 112578999999999999988899999999888888764
No 405
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.97 E-value=9.9e-10 Score=112.99 Aligned_cols=188 Identities=18% Similarity=0.224 Sum_probs=120.9
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|.|..|+|+.. +|+..|+|+..-. . +. ..+. +.+.+||+
T Consensus 17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~----------------k----~~------~~~~--------e~l~rEar 62 (355)
T KOG0033|consen 17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTK----------------K----LS------ARDF--------QKLEREAR 62 (355)
T ss_pred HHHccCchHHHHHHHhccchHHHHHHHhhhh----------------h----hc------cccH--------HHHHHHHH
Confidence 3588999999999988 6888888864321 0 00 0111 12345555
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhh-hhhhhh-cCCCHHHHHHHHHHHHHHHHHhCCccccCC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINR-IQSLDE-LGVDRKRLGRYAVESYLEQILSHGFFHADP 454 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d-~~~l~~-~g~d~~~la~~lv~~~L~qI~~~GffHaDp 454 (760)
... ++++..-+..-+.|. -.+-++||.|+++|..|.. +.+-.- ...+.....+.++++ +...|..|++|+|+
T Consensus 63 IC~----~LqHP~IvrL~~ti~-~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLea-l~yCH~n~IvHRDv 136 (355)
T KOG0033|consen 63 ICR----KLQHPNIVRLHDSIQ-EESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEA-LAYCHSNGIVHRDL 136 (355)
T ss_pred HHH----hcCCCcEeehhhhhc-ccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCceeccC
Confidence 444 444443333333331 1234799999999998864 221100 000111222222222 45567899999999
Q ss_pred CCCcEEEeccCCC-cEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHH
Q 004334 455 HPGNIAVDDVNGG-RLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSF 533 (760)
Q Consensus 455 HPGNILV~~~~~g-~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~~~ 533 (760)
+|.|+++....++ .++|+|||++..++... + ..-..+.+.+|++++++-.....+.|+++-...+..++..|
T Consensus 137 kP~nllLASK~~~A~vKL~~FGvAi~l~~g~------~-~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~ 209 (355)
T KOG0033|consen 137 KPENLLLASKAKGAAVKLADFGLAIEVNDGE------A-WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 209 (355)
T ss_pred ChhheeeeeccCCCceeecccceEEEeCCcc------c-cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCC
Confidence 9999999753333 69999999999998432 1 22346899999999999988889999999998877776654
No 406
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.97 E-value=1.6e-09 Score=130.86 Aligned_cols=140 Identities=21% Similarity=0.283 Sum_probs=88.2
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
+-+|.|++|+||+|+. +|+.||+||++|-.. +|+.|...+..-+. +. +..-
T Consensus 704 ~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~----WEfYI~~q~~~RLk---~~---------------------~~~~ 755 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHSNGKLVALKVEKPPNP----WEFYICLQVMERLK---PQ---------------------MLPS 755 (974)
T ss_pred eeeccccceEEEEeecCCCcEEEEEeecCCCc----eeeeehHHHHHhhc---hh---------------------hhcc
Confidence 3599999999999999 799999999998422 22333222221111 00 0000
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCccccCCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGFFHADPH 455 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~~GffHaDpH 455 (760)
...+... | -+.+..+||+||.+=++|-|+.. .....+..-++-..+ -.+++++|.+||+|||+|
T Consensus 756 ~~~~~~a------------~-~~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiK 821 (974)
T KOG1166|consen 756 IMHISSA------------H-VFQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIK 821 (974)
T ss_pred hHHHHHH------------H-ccCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCC
Confidence 0001000 0 24567899999999999988765 222223322222222 234789999999999999
Q ss_pred CCcEEEecc-----CCCcEEEEeecceecc
Q 004334 456 PGNIAVDDV-----NGGRLIFYDFGMMGSI 480 (760)
Q Consensus 456 PGNILV~~~-----~~g~l~LiDFG~v~~l 480 (760)
|.|+|++.. +..-|+|||||.+-.+
T Consensus 822 PDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 822 PDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred cceeEeecccCCCCcccceEEEecccceee
Confidence 999999732 1235999999987554
No 407
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=98.96 E-value=1.4e-09 Score=113.35 Aligned_cols=171 Identities=20% Similarity=0.247 Sum_probs=94.8
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCC-chhh---HHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPG-LKDL---FDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPg-i~~~---i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~ 373 (760)
-+|+|+.|||++++. +|.-.|||..+.. -.+. |-.|++++.
T Consensus 99 dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~--------------------------------- 145 (391)
T KOG0983|consen 99 DLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVL--------------------------------- 145 (391)
T ss_pred hhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHh---------------------------------
Confidence 489999999999999 5899999976542 2221 112222111
Q ss_pred HHHHHHHHHHhcCCCCceeeceeeecc--CCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHH----hC
Q 004334 374 EAANAELFASNFKDMDYVKVPTIFWEY--TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQIL----SH 447 (760)
Q Consensus 374 EA~nl~~f~~~~~~~~~V~VP~vy~e~--st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~----~~ 447 (760)
..++.-+|-+.|..+ .+.-.+.||.+. .-.+.+...- .+.-+++++..+.-+..+.++ .|
T Consensus 146 ------------~s~dcpyIV~c~GyFi~n~dV~IcMelMs-~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH 211 (391)
T KOG0983|consen 146 ------------KSHDCPYIVQCFGYFITNTDVFICMELMS-TCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKH 211 (391)
T ss_pred ------------hccCCCeeeeeeeEEeeCchHHHHHHHHH-HHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhc
Confidence 111112222222222 233355566552 1122222111 122344555554444444443 68
Q ss_pred CccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC---CCCCChHHHHH
Q 004334 448 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL---VPTGDTTAVRR 524 (760)
Q Consensus 448 GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~---~~~~D~~al~~ 524 (760)
|++|+|.||.|||+++ .|.|+|+|||+++++.+..... =..+=+.+|+++-++-.-. .-..|+|++.-
T Consensus 212 ~viHRDvKPSNILlDe--~GniKlCDFGIsGrlvdSkAht-------rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGI 282 (391)
T KOG0983|consen 212 GVIHRDVKPSNILLDE--RGNIKLCDFGISGRLVDSKAHT-------RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGI 282 (391)
T ss_pred ceeecccCccceEEcc--CCCEEeecccccceeecccccc-------cccCCccccCccccCCCCCCccchhhhhhhhcc
Confidence 9999999999999986 8999999999999997753221 1234455666655443210 11235566554
Q ss_pred HH
Q 004334 525 TA 526 (760)
Q Consensus 525 ~~ 526 (760)
.+
T Consensus 283 Tl 284 (391)
T KOG0983|consen 283 TL 284 (391)
T ss_pred ch
Confidence 43
No 408
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=98.93 E-value=8.6e-09 Score=104.05 Aligned_cols=176 Identities=16% Similarity=0.187 Sum_probs=104.2
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
-||.|.+|||-+-++ +|+-.|||-.+--+..+ ....+..|...
T Consensus 53 elGrGayG~vekmrh~~sg~imAvKri~~tvn~q-----------------------------------~q~r~L~dldi 97 (282)
T KOG0984|consen 53 ELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQ-----------------------------------EQKRLLMDLDI 97 (282)
T ss_pred hhcCCccchhhheeeccCCeEEEEeeehhhcChH-----------------------------------HHHHHHHhhhh
Confidence 489999999988888 79999999655432211 00111111111
Q ss_pred HHHHHHhcCCCCceeeceeeecc--CCCeEEEEeecCCCchhhhh--hhhhcCCCHHHHHHHHHHHH---HHHHH-hCCc
Q 004334 378 AELFASNFKDMDYVKVPTIFWEY--TTPQILTMEYVPGIKINRIQ--SLDELGVDRKRLGRYAVESY---LEQIL-SHGF 449 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~--st~~vLVME~ieG~~L~d~~--~l~~~g~d~~~la~~lv~~~---L~qI~-~~Gf 449 (760)
.....+-..+-..|..+ +.+-++.||.++ .+++.+- .++..+.-++.+...++-+. +..+| ...+
T Consensus 98 ------~~r~~~CPf~V~FyGa~~regdvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~v 170 (282)
T KOG0984|consen 98 ------IMRTVDCPFTVHFYGALFREGDVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSV 170 (282)
T ss_pred ------hccCCCCCeEEEeehhhhccccEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhh
Confidence 11111111222223222 467799999986 3455432 23333433444444443333 44455 4589
Q ss_pred cccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC----CCCCChHHHHHH
Q 004334 450 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL----VPTGDTTAVRRT 525 (760)
Q Consensus 450 fHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~----~~~~D~~al~~~ 525 (760)
+|+|.||+|||++. +|+++++|||+++.+.+.... .+..+=-.+++++.++-+.- +-..|++++.-.
T Consensus 171 IHRDvKPsNiLIn~--~GqVKiCDFGIsG~L~dSiAk-------t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGIt 241 (282)
T KOG0984|consen 171 IHRDVKPSNILINY--DGQVKICDFGISGYLVDSIAK-------TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGIT 241 (282)
T ss_pred hhccCCcceEEEcc--CCcEEEcccccceeehhhhHH-------HHhcCCCccCChhhcCcccCcccceeehhhhhhhhh
Confidence 99999999999986 899999999999999775332 22234445666666654432 234688887754
Q ss_pred H
Q 004334 526 A 526 (760)
Q Consensus 526 ~ 526 (760)
+
T Consensus 242 m 242 (282)
T KOG0984|consen 242 M 242 (282)
T ss_pred h
Confidence 3
No 409
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.93 E-value=1.4e-09 Score=115.30 Aligned_cols=190 Identities=18% Similarity=0.165 Sum_probs=119.2
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEec--CC-chhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQR--PG-LKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqr--Pg-i~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~ 372 (760)
.+-+|+|.+|.|-.++- +|.++||||.. || .+..+-++++++...
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~C------------------------------ 132 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQC------------------------------ 132 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHh------------------------------
Confidence 35799999999999987 79999999853 32 122222222222211
Q ss_pred HHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHH--HHHHHHHHHHHHHHHhCCcc
Q 004334 373 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRK--RLGRYAVESYLEQILSHGFF 450 (760)
Q Consensus 373 ~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~--~la~~lv~~~L~qI~~~Gff 450 (760)
+-..|+-++-+.| +..++.|||||-+.|++|-.-+.... .++.. .....-+...|.-+|..|+-
T Consensus 133 qgh~nilqLiefF-------------Edd~~FYLVfEKm~GGplLshI~~~~-~F~E~EAs~vvkdia~aLdFlH~kgIA 198 (463)
T KOG0607|consen 133 QGHKNILQLIEFF-------------EDDTRFYLVFEKMRGGPLLSHIQKRK-HFNEREASRVVKDIASALDFLHTKGIA 198 (463)
T ss_pred cCCccHHHHHHHh-------------cccceEEEEEecccCchHHHHHHHhh-hccHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 0012222222333 33466799999999999876332111 12211 12222345668999999999
Q ss_pred ccCCCCCcEEEeccCC-CcEEEEeecceeccChh------hHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCCCCCC
Q 004334 451 HADPHPGNIAVDDVNG-GRLIFYDFGMMGSISPN------IREGLLEAFYGIYEKDADKVLQAMVQM-----GVLVPTGD 518 (760)
Q Consensus 451 HaDpHPGNILV~~~~~-g~l~LiDFG~v~~l~~~------~r~~l~~l~~al~~~D~~~v~~~l~~l-----G~~~~~~D 518 (760)
|+|+||.|||..+++. ..++++||-+...+... ..-.+ ..--+..++|++++.+. -+.....|
T Consensus 199 HRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L-----~tPvGSAEfMAPEVVd~fv~qA~~YDKrCD 273 (463)
T KOG0607|consen 199 HRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPEL-----LTPVGSAEFMAPEVVDVFVDQATFYDKRCD 273 (463)
T ss_pred cccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccc-----cCcccchhhcchhHHhhhcccccccccccc
Confidence 9999999999975221 25899999876543211 11111 11246778888887764 34456779
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 004334 519 TTAVRRTAQFFLNSFEER 536 (760)
Q Consensus 519 ~~al~~~~~~~l~~~~~~ 536 (760)
.+++..+++-|+..|.+.
T Consensus 274 lwSLGvIlYImLsGYpPF 291 (463)
T KOG0607|consen 274 LWSLGVILYIMLSGYPPF 291 (463)
T ss_pred HHHHHHHHHHHHhCCCCc
Confidence 999999999999988543
No 410
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=98.92 E-value=2.5e-09 Score=117.11 Aligned_cols=137 Identities=17% Similarity=0.216 Sum_probs=88.3
Q ss_pred CccccccccccEEEEEEE-C----CeeEEEEEecCCc-hhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHH
Q 004334 297 DVEPIAAASLGQVHRARL-K----GEEVVVKVQRPGL-KDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 370 (760)
Q Consensus 297 d~~PIasaSiGQVhrA~l-~----G~~VAVKVqrPgi-~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~ 370 (760)
..++||.|+|+.||+|++ . ++.||+|-.++-- ...+..+++.|..+..
T Consensus 40 ~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG-------------------------- 93 (418)
T KOG1167|consen 40 VVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGG-------------------------- 93 (418)
T ss_pred hhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhcc--------------------------
Confidence 346899999999999998 3 5789999655421 1223333333322211
Q ss_pred HHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHH--HHHHHHhCC
Q 004334 371 LYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQILSHG 448 (760)
Q Consensus 371 l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~--~L~qI~~~G 448 (760)
..|...+...++ ..+..++||||.+-....++.. +++-..+-..+-.. .+..+|..|
T Consensus 94 ----~~ni~~~~~~~r-------------nnd~v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~G 152 (418)
T KOG1167|consen 94 ----SDNIIKLNGCFR-------------NNDQVAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKNG 152 (418)
T ss_pred ----chhhhcchhhhc-------------cCCeeEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhccC
Confidence 111222222222 2345689999999888777643 12333333333322 377889999
Q ss_pred ccccCCCCCcEEEeccCCCcEEEEeecceeccC
Q 004334 449 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS 481 (760)
Q Consensus 449 ffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~ 481 (760)
++|+|+||+|++.+. ..++-.|+|||++...+
T Consensus 153 IvHRDiKpsNFL~n~-~t~rg~LvDFgLA~~~d 184 (418)
T KOG1167|consen 153 IVHRDIKPSNFLYNR-RTQRGVLVDFGLAQRYD 184 (418)
T ss_pred ccccCCCcccccccc-ccCCceEEechhHHHHH
Confidence 999999999999986 57889999999998643
No 411
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.89 E-value=4.1e-09 Score=116.04 Aligned_cols=169 Identities=19% Similarity=0.186 Sum_probs=107.3
Q ss_pred cccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
+-||.|-||.|+||.+.|+.|||||-..--++...++-+|...+ .|+ ..|+
T Consensus 217 e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTv---------------------------mLR--HENI 267 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTV---------------------------MLR--HENI 267 (513)
T ss_pred EEecCccccceeeccccCCceEEEEecccchhhhhhHHHHHHHH---------------------------Hhc--cchh
Confidence 57999999999999999999999996542222211111111110 111 2233
Q ss_pred HHH-HHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH--HHHHHHH--------hC
Q 004334 379 ELF-ASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQIL--------SH 447 (760)
Q Consensus 379 ~~f-~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI~--------~~ 447 (760)
-.| +...++. ...|+.+||++|-|-++|.|++. ...++.......... .-|..+| .-
T Consensus 268 LgFIaaD~~~~----------gs~TQLwLvTdYHe~GSL~DyL~--r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKP 335 (513)
T KOG2052|consen 268 LGFIAADNKDN----------GSWTQLWLVTDYHEHGSLYDYLN--RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKP 335 (513)
T ss_pred hhhhhccccCC----------CceEEEEEeeecccCCcHHHHHh--hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCc
Confidence 333 1111111 24578999999999999999864 344555544444332 2255555 23
Q ss_pred CccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC
Q 004334 448 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV 512 (760)
Q Consensus 448 GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~ 512 (760)
.+-|||+|.-||||.. +|..++.|+|++.+.+.... .++.--.---++..+|++++++-.+
T Consensus 336 aIAHRDlKSKNILVKk--n~~C~IADLGLAv~h~~~t~--~idi~~N~rVGTKRYMAPEvLdeti 396 (513)
T KOG2052|consen 336 AIAHRDLKSKNILVKK--NGTCCIADLGLAVRHDSDTD--TIDIPPNPRVGTKRYMAPEVLDETI 396 (513)
T ss_pred hhhccccccccEEEcc--CCcEEEeeceeeEEecccCC--cccCCCCCccceeeccChHHhhhhc
Confidence 5999999999999985 89999999999988776541 1111111123677889999887543
No 412
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=98.87 E-value=1.7e-09 Score=113.98 Aligned_cols=188 Identities=13% Similarity=0.096 Sum_probs=123.0
Q ss_pred CccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH
Q 004334 297 DVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (760)
Q Consensus 297 d~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E 374 (760)
+.+.||.|--|.|-.+.. +|+..|+||.+-.-+..-+-|+. +.
T Consensus 66 s~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KARrEVeLH---w~-------------------------------- 110 (400)
T KOG0604|consen 66 SWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKARREVELH---WM-------------------------------- 110 (400)
T ss_pred hhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHHhHhhhh---hh--------------------------------
Confidence 447899999999999988 59999999864321111111110 00
Q ss_pred HHHHHHHHHhcCCCCceeeceeeeccC---CCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhCC
Q 004334 375 AANAELFASNFKDMDYVKVPTIFWEYT---TPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSHG 448 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~V~VP~vy~e~s---t~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~l--v~~~L~qI~~~G 448 (760)
.-.+..-|.|-.||...- ....+|||.++|+.|..-...+. ..+..++.++.+ +...+..+|..+
T Consensus 111 ---------~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n 181 (400)
T KOG0604|consen 111 ---------ASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN 181 (400)
T ss_pred ---------hcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc
Confidence 011223355555554321 23478999999999987443322 224444444332 445578899999
Q ss_pred ccccCCCCCcEEEecc-CCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004334 449 FFHADPHPGNIAVDDV-NGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 527 (760)
Q Consensus 449 ffHaDpHPGNILV~~~-~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~ 527 (760)
+-|||+||.|+|+... ++-.++|.|||+++.-.... .+. .-.-++.+++++.+.-.......|+++++..++
T Consensus 182 IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~--~L~-----TPc~TPyYvaPevlg~eKydkscdmwSlgVimY 254 (400)
T KOG0604|consen 182 IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPG--DLM-----TPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 254 (400)
T ss_pred hhhccCChhheeeecCCCCcceEecccccccccCCCc--ccc-----CCcccccccCHHHhCchhcCCCCCccchhHHHH
Confidence 9999999999999752 23469999999998765321 110 112467888998876666667789999999998
Q ss_pred HHHHHHHH
Q 004334 528 FFLNSFEE 535 (760)
Q Consensus 528 ~~l~~~~~ 535 (760)
-++-.|-.
T Consensus 255 IlLCGyPP 262 (400)
T KOG0604|consen 255 ILLCGYPP 262 (400)
T ss_pred HhhcCCCc
Confidence 88877644
No 413
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.86 E-value=1.3e-08 Score=102.98 Aligned_cols=146 Identities=19% Similarity=0.241 Sum_probs=89.4
Q ss_pred ccccccccccEEEEEEEC-CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARLK-GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l~-G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
-+|++.|..++||+.+.. |+.+++|+-+++-.. .....+..|++
T Consensus 3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~-----------------------------------~~~~~~~~E~~ 47 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL-----------------------------------PSAHDVAREYR 47 (223)
T ss_pred ceecCCCccceEEEEEecCCcceEEEeCCCcccC-----------------------------------cccccHHHHHH
Confidence 478999999999999984 699999986553110 00112456777
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCC-----CeEEEEeecCCCchhhhhh----------------------hhhc----
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTT-----PQILTMEYVPGIKINRIQS----------------------LDEL---- 425 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st-----~~vLVME~ieG~~L~d~~~----------------------l~~~---- 425 (760)
.++.+++. .+.+|+++.-... ..+++|||++|.++.+... +...
T Consensus 48 ~~~~l~~~-----~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ 122 (223)
T cd05154 48 VLRALAGT-----GVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAA 122 (223)
T ss_pred HHHHhhCC-----CCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhh
Confidence 77777542 4567887654433 3589999999998866321 0000
Q ss_pred -CC---C------HHHHHHH-------------HHHHHHHHH-------HhCCccccCCCCCcEEEeccCCCcEEEEeec
Q 004334 426 -GV---D------RKRLGRY-------------AVESYLEQI-------LSHGFFHADPHPGNIAVDDVNGGRLIFYDFG 475 (760)
Q Consensus 426 -g~---d------~~~la~~-------------lv~~~L~qI-------~~~GffHaDpHPGNILV~~~~~g~l~LiDFG 475 (760)
+. . ...+... .+...++.+ ....++|+|+||+||++++..++.+.+|||+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e 202 (223)
T cd05154 123 VGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWE 202 (223)
T ss_pred cCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecc
Confidence 00 0 0000000 001111111 1367899999999999985213568999999
Q ss_pred ceeccChh
Q 004334 476 MMGSISPN 483 (760)
Q Consensus 476 ~v~~l~~~ 483 (760)
.++.-++.
T Consensus 203 ~~~~g~~~ 210 (223)
T cd05154 203 LATLGDPL 210 (223)
T ss_pred ccccCChH
Confidence 99866553
No 414
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.85 E-value=6.8e-08 Score=103.10 Aligned_cols=141 Identities=15% Similarity=0.031 Sum_probs=89.7
Q ss_pred EEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 004334 308 QVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANAELFASNFKD 387 (760)
Q Consensus 308 QVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl~~f~~~~~~ 387 (760)
.|.+..+.|+.+.||.+.+..... +++.+..+ -.| .....+|.+++.++.+.
T Consensus 37 rvvr~~~~g~~~~vKr~~~~~~~~------~~k~l~~~---~~p----------------~~~a~rE~~~l~~L~~~--- 88 (268)
T PRK15123 37 RTLRFELAGKSYFLKWHRGTGWGE------IFKNLLSL---RMP----------------VLGADREWRAIHRLHEV--- 88 (268)
T ss_pred eEEEEEECCEEEEEEEecCCcHHH------Hhhhhccc---ccc----------------cHHHHHHHHHHHHHHHc---
Confidence 477888899999999776643221 11111100 000 01245788889888653
Q ss_pred CCceeecee--eecc-----CCCeEEEEeecCCC-chhhhhhhh-hcCCC---HHHHHHHHHHHHHHHHHhCCccccCCC
Q 004334 388 MDYVKVPTI--FWEY-----TTPQILTMEYVPGI-KINRIQSLD-ELGVD---RKRLGRYAVESYLEQILSHGFFHADPH 455 (760)
Q Consensus 388 ~~~V~VP~v--y~e~-----st~~vLVME~ieG~-~L~d~~~l~-~~g~d---~~~la~~lv~~~L~qI~~~GffHaDpH 455 (760)
+|.+|.+ |.+. ....+||||+++|. ++.++.... ....+ ...+... +..++.++|..|++|+|++
T Consensus 89 --GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~-la~~i~~LH~~Gi~HgDL~ 165 (268)
T PRK15123 89 --GVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKR-VATMVRDMHAAGINHRDCY 165 (268)
T ss_pred --CCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHH-HHHHHHHHHHCcCccCCCC
Confidence 4677776 4332 23478999999996 788875311 11111 1223232 4456888999999999999
Q ss_pred CCcEEEec-----cCCCcEEEEeecceec
Q 004334 456 PGNIAVDD-----VNGGRLIFYDFGMMGS 479 (760)
Q Consensus 456 PGNILV~~-----~~~g~l~LiDFG~v~~ 479 (760)
|+|||++. .+++++.||||+.+..
T Consensus 166 ~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 166 ICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred hhhEEEeccccCCCCCceEEEEECCcccc
Confidence 99999974 1246899999998853
No 415
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=98.85 E-value=1.7e-09 Score=120.25 Aligned_cols=117 Identities=20% Similarity=0.168 Sum_probs=90.4
Q ss_pred EEEEeecCCCchhhhhhhhhcCCC--HHHHHHHHHHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccCh
Q 004334 405 ILTMEYVPGIKINRIQSLDELGVD--RKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 482 (760)
Q Consensus 405 vLVME~ieG~~L~d~~~l~~~g~d--~~~la~~lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~ 482 (760)
|+.||-|=|+.|+.+...+. .+| ..+.....+-..+.++|.+||+.+|+||.|++++. +|-++|.|||.++.+..
T Consensus 496 YmLmEaClGGElWTiLrdRg-~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~--~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILRDRG-SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDN--RGYLKLVDFGFAKKIGS 572 (732)
T ss_pred hhhHHhhcCchhhhhhhhcC-CcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeecc--CCceEEeehhhHHHhcc
Confidence 68999999999998765332 222 23333444445578999999999999999999986 89999999999999977
Q ss_pred hhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 483 NIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 483 ~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
..+.. .+.+++++++++++-..-....+|.+++.-.+++++.
T Consensus 573 g~KTw-------TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~ 614 (732)
T KOG0614|consen 573 GRKTW-------TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLT 614 (732)
T ss_pred CCcee-------eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHc
Confidence 65531 2458999999998866556777899999877766653
No 416
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=98.82 E-value=6.7e-09 Score=117.15 Aligned_cols=185 Identities=19% Similarity=0.182 Sum_probs=112.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH--
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE-- 374 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E-- 374 (760)
.|+|.|.+|||..|++ +...|+||.... +.|-.|.++ . + .++-.+-.|+.-.-.-+
T Consensus 567 q~lG~GAyGkV~lai~K~n~~eVViK~I~K---eRIL~DtWv--------r--D-------rkLGtVp~EIqIla~l~~~ 626 (772)
T KOG1152|consen 567 QPLGEGAYGKVNLAIHKENNYEVVIKMIFK---ERILVDTWV--------R--D-------RKLGTVPSEIQILATLNKH 626 (772)
T ss_pred eeccccccceEEEeeecccceEEEeeehhh---hhhhhhhhh--------c--c-------cccCccchhHHHHHHhhhc
Confidence 7999999999999999 478999997644 222223210 0 0 11111111221110111
Q ss_pred -HHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEee-cCCCchhhhhhhhhcCCC-HHHHHHHHHHHHHHHHHhCCccc
Q 004334 375 -AANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEY-VPGIKINRIQSLDELGVD-RKRLGRYAVESYLEQILSHGFFH 451 (760)
Q Consensus 375 -A~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~-ieG~~L~d~~~l~~~g~d-~~~la~~lv~~~L~qI~~~GffH 451 (760)
..|+-++-..|.++ .-.+|+||- =+|+.|.|+......-.+ ...+.=..+.+..+.+|..|++|
T Consensus 627 sH~NIlKlLdfFEdd-------------d~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivh 693 (772)
T KOG1152|consen 627 SHENILKLLDFFEDD-------------DYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVH 693 (772)
T ss_pred CccchhhhhheeecC-------------CeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCcee
Confidence 23333333334333 334788884 568888887754432111 11222223444567789999999
Q ss_pred cCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHH
Q 004334 452 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTA 526 (760)
Q Consensus 452 aDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~~~ 526 (760)
||+|-.|++++. +|-++|||||.+......- . -++.++.++++++++.- .+....-|.++++-.+
T Consensus 694 rdikdenvivd~--~g~~klidfgsaa~~ksgp----f----d~f~gtv~~aapevl~g~~y~gk~qdiwalgill 759 (772)
T KOG1152|consen 694 RDIKDENVIVDS--NGFVKLIDFGSAAYTKSGP----F----DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILL 759 (772)
T ss_pred cccccccEEEec--CCeEEEeeccchhhhcCCC----c----ceeeeeccccchhhhCCCccCCCcchhhhhhhee
Confidence 999999999985 8999999999887654321 1 23457888899988764 3455567999887543
No 417
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=98.82 E-value=1.1e-08 Score=119.49 Aligned_cols=181 Identities=15% Similarity=0.122 Sum_probs=123.5
Q ss_pred CccccccccccE-EEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 297 DVEPIAAASLGQ-VHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 297 d~~PIasaSiGQ-VhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
+++-+|.||-|. ||+|...|++||||-. +.||-....+|.
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrl---------------------------------------l~e~~~~A~rEi 553 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVYEGREVAVKRL---------------------------------------LEEFFDFAQREI 553 (903)
T ss_pred cHHHcccCCCCcEEEEEeeCCceehHHHH---------------------------------------hhHhHHHHHHHH
Confidence 345677888886 7999999999999922 223333445676
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCC-----eEEEEeecCCCchhhhhhhh-----hcC-CCHHHHHHHHHHHHHHHH
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTP-----QILTMEYVPGIKINRIQSLD-----ELG-VDRKRLGRYAVESYLEQI 444 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~-----~vLVME~ieG~~L~d~~~l~-----~~g-~d~~~la~~lv~~~L~qI 444 (760)
.++..-. ++++ ++.-||++ .|++.|.|. .+|+|+.... ..+ +++..+...++. .+..+
T Consensus 554 ~lL~eSD----~H~N-----viRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~-GlaHL 622 (903)
T KOG1027|consen 554 QLLQESD----EHPN-----VIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIAS-GLAHL 622 (903)
T ss_pred HHHHhcc----CCCc-----eEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHH-HHHHH
Confidence 6666432 2333 33344443 599999985 4677765442 111 344444444333 47889
Q ss_pred HhCCccccCCCCCcEEEecc---CCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHH
Q 004334 445 LSHGFFHADPHPGNIAVDDV---NGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTA 521 (760)
Q Consensus 445 ~~~GffHaDpHPGNILV~~~---~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~a 521 (760)
|..+++|+|+||.||||... ...+++|.|||+++.++... ..+.. .+-..+.....+++++........+|+.+
T Consensus 623 Hsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~-sS~~r--~s~~sGt~GW~APE~L~~~~~~~avDiFs 699 (903)
T KOG1027|consen 623 HSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK-SSFSR--LSGGSGTSGWQAPEQLREDRKTQAVDIFS 699 (903)
T ss_pred HhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCc-chhhc--ccCCCCcccccCHHHHhccccCcccchhh
Confidence 99999999999999999841 22478999999999997653 33333 34456888899999999888777888888
Q ss_pred HHHHHHHHH
Q 004334 522 VRRTAQFFL 530 (760)
Q Consensus 522 l~~~~~~~l 530 (760)
++-.+++.+
T Consensus 700 lGCvfyYvl 708 (903)
T KOG1027|consen 700 LGCVFYYVL 708 (903)
T ss_pred cCceEEEEe
Confidence 776655443
No 418
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.81 E-value=1.4e-08 Score=115.01 Aligned_cols=101 Identities=17% Similarity=0.229 Sum_probs=70.3
Q ss_pred cCCCeEEEEeecCCCchhhhhhhhhcCCCHH--HHHHHHHHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecce
Q 004334 400 YTTPQILTMEYVPGIKINRIQSLDELGVDRK--RLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMM 477 (760)
Q Consensus 400 ~st~~vLVME~ieG~~L~d~~~l~~~g~d~~--~la~~lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v 477 (760)
|.+..++..|||.|+-++.+.---..++... ++.-.-+-..|..+|..+++|+|+|.||||++- +|.|.|.|||..
T Consensus 100 ~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tl--dGdirLADFGVS 177 (1187)
T KOG0579|consen 100 FENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTL--DGDIRLADFGVS 177 (1187)
T ss_pred ccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEe--cCcEeeeccccc
Confidence 4577899999999999987642212222222 222223334578899999999999999999986 899999999998
Q ss_pred eccChhhHHHHHHHHHHHhhcCHHHHHHHHH
Q 004334 478 GSISPNIREGLLEAFYGIYEKDADKVLQAMV 508 (760)
Q Consensus 478 ~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~ 508 (760)
......... .+. +-+++..|++++.
T Consensus 178 AKn~~t~qk--RDs----FIGTPYWMAPEVv 202 (1187)
T KOG0579|consen 178 AKNKSTRQK--RDS----FIGTPYWMAPEVV 202 (1187)
T ss_pred ccchhHHhh--hcc----ccCCcccccchhe
Confidence 776543221 112 2357777777764
No 419
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=98.80 E-value=2.2e-08 Score=111.90 Aligned_cols=143 Identities=27% Similarity=0.354 Sum_probs=85.8
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCc--hhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGL--KDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi--~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
-.|.|-|+.|.+|.. .|+.|||||.|.+- .+.=..++.||+.+.. ..|. . -
T Consensus 439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~----AD~E---------d------------k 493 (752)
T KOG0670|consen 439 YTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLND----ADPE---------D------------K 493 (752)
T ss_pred ccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhc----cCch---------h------------h
Confidence 478999999999999 59999999998751 1122234555554432 1111 0 0
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhh--hhcCCCHHHHHHHHHHHHHHH-------HHh
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL--DELGVDRKRLGRYAVESYLEQ-------ILS 446 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l--~~~g~d~~~la~~lv~~~L~q-------I~~ 446 (760)
.+.-++...|. +....|||.|-+. ..|.+++.- ...|+..+ .++.|.+| +-.
T Consensus 494 ~Hclrl~r~F~-------------hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ik-----aVRsYaqQLflALklLK~ 554 (752)
T KOG0670|consen 494 FHCLRLFRHFK-------------HKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIK-----AVRSYAQQLFLALKLLKK 554 (752)
T ss_pred hHHHHHHHHhh-------------hcceeEEEehhhh-chHHHHHHHhCcccceeeh-----HHHHHHHHHHHHHHHHHh
Confidence 11112222222 2234577777652 334444321 11122222 23444444 447
Q ss_pred CCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHH
Q 004334 447 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREG 487 (760)
Q Consensus 447 ~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~ 487 (760)
.||+|||+||.||||+. ....++|||||.+...++..-.-
T Consensus 555 c~vlHaDIKPDNiLVNE-~k~iLKLCDfGSA~~~~eneitP 594 (752)
T KOG0670|consen 555 CGVLHADIKPDNILVNE-SKNILKLCDFGSASFASENEITP 594 (752)
T ss_pred cCeeecccCccceEecc-CcceeeeccCccccccccccccH
Confidence 89999999999999986 45679999999999988765443
No 420
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=98.75 E-value=5.6e-08 Score=106.71 Aligned_cols=190 Identities=16% Similarity=0.159 Sum_probs=112.7
Q ss_pred ccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
-+|.|+|..||+|.+ ..+.|||||-+-+ .+|.+ |-......-|
T Consensus 470 LLGrGGFSEVyKAFDl~EqRYvAvKIHqlN------------------------------K~Wrd---EKKeNYhKHA-- 514 (775)
T KOG1151|consen 470 LLGRGGFSEVYKAFDLTEQRYVAVKIHQLN------------------------------KNWRD---EKKENYHKHA-- 514 (775)
T ss_pred HhccccHHHHHHhcccchhheeeEeeehhc------------------------------cchhh---HhhhhHHHHH--
Confidence 589999999999998 5899999985431 12322 1111111111
Q ss_pred HHHHHHhcCCCCceeeceeeeccC---CCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH---HHHHHHH--hCCc
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYT---TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE---SYLEQIL--SHGF 449 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~s---t~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~---~~L~qI~--~~Gf 449 (760)
.+=.+.++..++..|-+.|.-++ ...+-|.|||+|-.|+=+...... ...+ -|+.++- ..|.++- .--+
T Consensus 515 -cREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhkl-mSEK-EARSIiMQiVnAL~YLNEikpPI 591 (775)
T KOG1151|consen 515 -CREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKL-MSEK-EARSIIMQIVNALKYLNEIKPPI 591 (775)
T ss_pred -HHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhh-hhHH-HHHHHHHHHHHHHHHHhccCCCe
Confidence 11122233333445556665443 456899999999998765432221 1111 2222221 2244443 3469
Q ss_pred cccCCCCCcEEEec-cCCCcEEEEeecceeccChhhHHHHHHH-HHHHhhcCHHHHHHHHHHcCCCC----CCCChHHHH
Q 004334 450 FHADPHPGNIAVDD-VNGGRLIFYDFGMMGSISPNIREGLLEA-FYGIYEKDADKVLQAMVQMGVLV----PTGDTTAVR 523 (760)
Q Consensus 450 fHaDpHPGNILV~~-~~~g~l~LiDFG~v~~l~~~~r~~l~~l-~~al~~~D~~~v~~~l~~lG~~~----~~~D~~al~ 523 (760)
+|-|+||||||+.. ..-|.|++.|||+.+.++++.-.....+ +..-..+++-++.++..-.|.-. ..+|+|++.
T Consensus 592 IHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvG 671 (775)
T KOG1151|consen 592 IHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVG 671 (775)
T ss_pred eeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeee
Confidence 99999999999863 1237899999999999887654322211 11223577777877776566333 346888887
Q ss_pred HHHH
Q 004334 524 RTAQ 527 (760)
Q Consensus 524 ~~~~ 527 (760)
.+.+
T Consensus 672 VIFy 675 (775)
T KOG1151|consen 672 VIFY 675 (775)
T ss_pred hhhh
Confidence 6543
No 421
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=98.72 E-value=2.3e-08 Score=116.54 Aligned_cols=186 Identities=13% Similarity=0.120 Sum_probs=128.4
Q ss_pred ccccccccccEEEEEEE--CCe----eEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGE----EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~----~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
...||+|.||.||+|.+ +|+ +|||||..-.-.. +-...+
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~-----------------------------------~~s~e~ 745 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSP-----------------------------------KASIEL 745 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCc-----------------------------------hhhHHH
Confidence 35799999999999999 554 7999986431100 001123
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCc
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGF 449 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv--~~~L~qI~~~Gf 449 (760)
.+||-+|.++. +...+++-.+- ..+...||++|++++.|.|+....+..+..+.+..... ...+++|+++++
T Consensus 746 LdeAl~masld----Hpnl~RLLgvc--~~s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrl 819 (1177)
T KOG1025|consen 746 LDEALRMASLD----HPNLLRLLGVC--MLSTLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRL 819 (1177)
T ss_pred HHHHHHHhcCC----CchHHHHhhhc--ccchHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcch
Confidence 44555554441 11112222222 23447899999999999998877776666666655543 344788999999
Q ss_pred cccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004334 450 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 450 fHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~ 529 (760)
+|||+-..|+||.. -..+++.|||++.-+.++..+..+. ...--+..|+=+.+.....+...|++++...+=++
T Consensus 820 VHrdLaaRNVLVks--P~hvkitdfgla~ll~~d~~ey~~~----~gK~pikwmale~i~~~~~thqSDVWsfGVtiWEl 893 (1177)
T KOG1025|consen 820 VHRDLAARNVLVKS--PNHVKITDFGLAKLLAPDEKEYSAP----GGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWEL 893 (1177)
T ss_pred hhhhhhhhheeecC--CCeEEEEecchhhccCccccccccc----ccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHH
Confidence 99999999999985 5689999999999998876653321 12223466777777788889999999999876555
Q ss_pred H
Q 004334 530 L 530 (760)
Q Consensus 530 l 530 (760)
+
T Consensus 894 m 894 (1177)
T KOG1025|consen 894 M 894 (1177)
T ss_pred H
Confidence 4
No 422
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.72 E-value=2.9e-08 Score=98.23 Aligned_cols=143 Identities=22% Similarity=0.287 Sum_probs=84.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
+.||.|.+|.|++|+. +++-||+|-.|-+-.+. +. +.+. .+|.-
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrldddde-----------------------gv---pssa--------lreic 53 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDE-----------------------GV---PSSA--------LREIC 53 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCCCC-----------------------CC---cHHH--------HHHHH
Confidence 5799999999999998 58999999776532111 00 0111 12221
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHH---HHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESY---LEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~---L~qI~~~GffHaD 453 (760)
.++.+ ++.+.|..-.+. ....+..||.|||+- .|..+...-...+|+. +++..+-.. +...|.+++.|+|
T Consensus 54 llkel----khknivrl~dvl-hsdkkltlvfe~cdq-dlkkyfdslng~~d~~-~~rsfmlqllrgl~fchshnvlhrd 126 (292)
T KOG0662|consen 54 LLKEL----KHKNIVRLHDVL-HSDKKLTLVFEFCDQ-DLKKYFDSLNGDLDPE-IVRSFMLQLLRGLGFCHSHNVLHRD 126 (292)
T ss_pred HHHHh----hhcceeehhhhh-ccCceeEEeHHHhhH-HHHHHHHhcCCcCCHH-HHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 22222 122223333332 122456899999973 3333322222223433 222222112 3335789999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhh
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNI 484 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~ 484 (760)
+||.|++|+. +|.+++.|||+++-+.-..
T Consensus 127 lkpqnllin~--ngelkladfglarafgipv 155 (292)
T KOG0662|consen 127 LKPQNLLINR--NGELKLADFGLARAFGIPV 155 (292)
T ss_pred CCcceEEecc--CCcEEecccchhhhcCCce
Confidence 9999999986 8999999999998765544
No 423
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.72 E-value=3.9e-08 Score=112.69 Aligned_cols=177 Identities=15% Similarity=0.114 Sum_probs=110.3
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..+|-|.+|.||-|++ +....|||-..- .- .+....+.+|+.-.-.--.+
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpe----kd------------------------sr~~QPLhEEIaLH~~LrHk 632 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPE----KD------------------------SREVQPLHEEIALHSTLRHK 632 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeeccc----cc------------------------chhhccHHHHHHHHHHHhhH
Confidence 4799999999999999 356778883211 10 01112223333211111234
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCC--CHHHHH--HHHHHHHHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGV--DRKRLG--RYAVESYLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~--d~~~la--~~lv~~~L~qI~~~GffHa 452 (760)
|+.++-..+..+. -.-+.||-++|++|+++....-..+ +...+. ...+-.-|+++|+..++|+
T Consensus 633 NIVrYLGs~senG-------------f~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHR 699 (1226)
T KOG4279|consen 633 NIVRYLGSVSENG-------------FFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHR 699 (1226)
T ss_pred hHHHHhhccCCCC-------------eEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeec
Confidence 5544433332221 2358899999999999875432222 222222 1223334788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC--CCCCChHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL--VPTGDTTAVR 523 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~--~~~~D~~al~ 523 (760)
|+|-.|+||+. -.|-+++.|||-++++..=. -. .-.+.++-.+|++++++-|.- .+..|+++++
T Consensus 700 DIKGDNVLvNT-ySGvlKISDFGTsKRLAgin--P~----TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~G 765 (1226)
T KOG4279|consen 700 DIKGDNVLVNT-YSGVLKISDFGTSKRLAGIN--PC----TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFG 765 (1226)
T ss_pred cccCCcEEEee-ccceEEecccccchhhccCC--cc----ccccccchhhhChHhhccCCcCCCchhhhhhcc
Confidence 99999999985 46899999999998764211 11 122457788999999998753 3456777665
No 424
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.70 E-value=2.2e-08 Score=117.70 Aligned_cols=185 Identities=16% Similarity=0.166 Sum_probs=125.2
Q ss_pred cccccccccEEEEEEEC-------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~-------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
+-+|.|.||.||.|+.. -+-||||..+-....+. ...+
T Consensus 492 ~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~-----------------------------------~~dF 536 (774)
T KOG1026|consen 492 EELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQA-----------------------------------RQDF 536 (774)
T ss_pred hhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHH-----------------------------------HHHH
Confidence 46999999999999983 25699997655433322 2335
Q ss_pred HHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-------cC------CCHHHHHHHH--
Q 004334 372 YQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-------LG------VDRKRLGRYA-- 436 (760)
Q Consensus 372 ~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-------~g------~d~~~la~~l-- 436 (760)
++||..+..| .|.+-|++-.|.. ...+.++|.|||+-++|.+++.... .+ ++..++....
T Consensus 537 ~REaeLla~l----~H~nIVrLlGVC~-~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~Q 611 (774)
T KOG1026|consen 537 RREAELLAEL----QHPNIVRLLGVCR-EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQ 611 (774)
T ss_pred HHHHHHHHhc----cCCCeEEEEEEEc-cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHH
Confidence 6777766665 3333455544442 3467899999999999999764321 11 2333333332
Q ss_pred HHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHH-HHHHHHhhcCHHHHHHHHHHcCCCCC
Q 004334 437 VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLL-EAFYGIYEKDADKVLQAMVQMGVLVP 515 (760)
Q Consensus 437 v~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~-~l~~al~~~D~~~v~~~l~~lG~~~~ 515 (760)
+.+-+.+|-.+.|+|+||-.-|.||.+ +-.+++.||||++.+=..+-.... +.++ -...|.++.+..|..+.
T Consensus 612 IAaGM~YLs~~~FVHRDLATRNCLVge--~l~VKIsDfGLsRdiYssDYYk~~~~t~l-----PIRWMppEsIly~kFTt 684 (774)
T KOG1026|consen 612 IAAGMEYLSSHHFVHRDLATRNCLVGE--NLVVKISDFGLSRDIYSSDYYKVRGNTLL-----PIRWMPPESILYGKFTT 684 (774)
T ss_pred HHHHHHHHHhCcccccchhhhhceecc--ceEEEecccccchhhhhhhhhcccCCcee-----eeecCCHHHhhcCcccc
Confidence 334467788999999999999999985 678999999999876433222111 1111 13567788888899999
Q ss_pred CCChHHHHHHHHHHH
Q 004334 516 TGDTTAVRRTAQFFL 530 (760)
Q Consensus 516 ~~D~~al~~~~~~~l 530 (760)
+.|+++++..+=+++
T Consensus 685 eSDVWs~GVvLWEIF 699 (774)
T KOG1026|consen 685 ESDVWSFGVVLWEIF 699 (774)
T ss_pred hhhhhhhhhhhhhhh
Confidence 999999998765543
No 425
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=98.66 E-value=1e-07 Score=108.38 Aligned_cols=184 Identities=18% Similarity=0.176 Sum_probs=122.7
Q ss_pred cccccccccEEEEEEE----CCe--eEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL----KGE--EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l----~G~--~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~ 372 (760)
..||.|-||.||+|+. +|+ -||||+-+.+.... . .+.+.
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d----------------------------------~-tekfl 439 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPD----------------------------------D-TEKFL 439 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCChh----------------------------------h-HHHHH
Confidence 3699999999999998 244 58888765532211 1 23456
Q ss_pred HHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCcc
Q 004334 373 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFF 450 (760)
Q Consensus 373 ~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~--lv~~~L~qI~~~Gff 450 (760)
+||-.|+.| .|..-|..-.+.. ..+.++|||.++=+.|..+...+...++...+... .+...+.+++...|+
T Consensus 440 qEa~iMrnf----dHphIikLIGv~~--e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfV 513 (974)
T KOG4257|consen 440 QEASIMRNF----DHPHIIKLIGVCV--EQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFV 513 (974)
T ss_pred HHHHHHHhC----CCcchhheeeeee--ccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchh
Confidence 777666655 3333333333332 24569999999999999887666555554433322 233457788999999
Q ss_pred ccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 451 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 451 HaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|+|+-..||||.. ...++|.|||+.+.++++.-..-. ...--...|+++-+..-..+...|++.|..-+-+++
T Consensus 514 HRDIAaRNiLVsS--p~CVKLaDFGLSR~~ed~~yYkaS-----~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl 586 (974)
T KOG4257|consen 514 HRDIAARNILVSS--PQCVKLADFGLSRYLEDDAYYKAS-----RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEIL 586 (974)
T ss_pred hhhhhhhheeecC--cceeeecccchhhhccccchhhcc-----ccccceeecCccccchhcccchhhHHHHHHHHHHHH
Confidence 9999999999985 568999999999999876432111 011234566777776666677778887776444443
No 426
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.66 E-value=4.9e-08 Score=111.50 Aligned_cols=192 Identities=18% Similarity=0.139 Sum_probs=125.0
Q ss_pred CCChhhhhcccCccccccccccEEEEEEE--CCeeEE---EEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccch
Q 004334 286 GAPLDDVFERFDVEPIAAASLGQVHRARL--KGEEVV---VKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDW 360 (760)
Q Consensus 286 G~~~~~iF~~fd~~PIasaSiGQVhrA~l--~G~~VA---VKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l 360 (760)
+.++...|-.|++ -||.|++=.||||.+ +|-+|| ||+ -.+.+.
T Consensus 34 e~~p~gRy~k~~e-vLGrGafKtVYka~De~~giEVAWnqvk~-------------------~d~~q~------------ 81 (632)
T KOG0584|consen 34 EKDPTGRYLKFDE-VLGRGAFKTVYKAFDEEEGIEVAWNQVKI-------------------RDVTQS------------ 81 (632)
T ss_pred ccCCCCceeehhh-hcccccceeeeeccccccchhhHHHHHhH-------------------HHhhcC------------
Confidence 4456666777764 699999999999998 476655 331 011000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeeccCCC--eEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH
Q 004334 361 VAIYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWEYTTP--QILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE 438 (760)
Q Consensus 361 ~~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~--~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~ 438 (760)
.+....+..|++.++-+ +|.+-|.+- -+|.-... ..+++|.+.+++|..+..-. ...+.+.+ ..-++
T Consensus 82 ----~~~leR~~~Ev~lLKsL----~H~NIirfy-~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~-~~vn~kai-k~W~R 150 (632)
T KOG0584|consen 82 ----PEELERLYSEVHLLKSL----KHPNIIRFY-DSWVDTDNKTINFITELFTSGTLREYRKKH-RRVNIKAI-KSWCR 150 (632)
T ss_pred ----hHHHHHHHHHHHHHccC----CCCceeeee-eheecCCCceeeeeeecccCCcHHHHHHHh-ccCCHHHH-HHHHH
Confidence 12234566777666643 333333332 34444443 58999999999999875321 12333322 11122
Q ss_pred HH---HHHHHhC--CccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC
Q 004334 439 SY---LEQILSH--GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL 513 (760)
Q Consensus 439 ~~---L~qI~~~--GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~ 513 (760)
.. |+.+|.+ -++|+|+|-.||||+. +.|.+++.|.|++..+....- +-+-|+++.|+++|.+-++
T Consensus 151 QILkGL~yLHs~~PPIIHRDLKCDNIFinG-~~G~VKIGDLGLAtl~r~s~a--------ksvIGTPEFMAPEmYEE~Y- 220 (632)
T KOG0584|consen 151 QILKGLVYLHSQDPPIIHRDLKCDNIFVNG-NLGEVKIGDLGLATLLRKSHA--------KSVIGTPEFMAPEMYEENY- 220 (632)
T ss_pred HHHHHhhhhhcCCCCccccccccceEEEcC-CcCceeecchhHHHHhhcccc--------ceeccCccccChHHHhhhc-
Confidence 22 4445554 4999999999999986 679999999999987755432 2246899999999999665
Q ss_pred CCCCChHHHHHHHHHHH
Q 004334 514 VPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 514 ~~~~D~~al~~~~~~~l 530 (760)
.+.+|+++|+-=+-+|.
T Consensus 221 nE~VDVYaFGMCmLEMv 237 (632)
T KOG0584|consen 221 NELVDVYAFGMCMLEMV 237 (632)
T ss_pred chhhhhhhhhHHHHHHH
Confidence 77889999986555444
No 427
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=98.65 E-value=1.3e-08 Score=106.08 Aligned_cols=142 Identities=21% Similarity=0.347 Sum_probs=81.7
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHH-HH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ-EA 375 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~-EA 375 (760)
.-||.|+||.||+-.+ .|+..|||-.|-...+. +. .++.-|....+.. +.
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~k---eq------------------------~rll~e~d~~mks~~c 122 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEK---EQ------------------------KRLLMEHDTVMKSSNC 122 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchH---HH------------------------HHHHHHHHHHHhhcCC
Confidence 4699999999999999 59999999776543211 10 0111111111111 12
Q ss_pred HHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhh----hhhcCCCHHHHHHHHHH--HHHHHHH-hCC
Q 004334 376 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQS----LDELGVDRKRLGRYAVE--SYLEQIL-SHG 448 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~----l~~~g~d~~~la~~lv~--~~L~qI~-~~G 448 (760)
-|+.+|.... + -.+..++.||.++ .+++.+-. .....+...-++...+. ..|..+- ...
T Consensus 123 p~IVkfyGa~-----------F--~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lk 188 (361)
T KOG1006|consen 123 PNIVKFYGAL-----------F--SEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELK 188 (361)
T ss_pred cHHHHHhhhh-----------h--cCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhh
Confidence 2333332211 0 1245699999996 45544321 11111222222211111 1233333 568
Q ss_pred ccccCCCCCcEEEeccCCCcEEEEeecceeccChh
Q 004334 449 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 483 (760)
Q Consensus 449 ffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~ 483 (760)
++|+|+||.|||++. .|.++|+|||++|++-+.
T Consensus 189 iIHRDvKPSNILldr--~G~vKLCDFGIcGqLv~S 221 (361)
T KOG1006|consen 189 IIHRDVKPSNILLDR--HGDVKLCDFGICGQLVDS 221 (361)
T ss_pred hhhccCChhheEEec--CCCEeeecccchHhHHHH
Confidence 999999999999986 899999999999998654
No 428
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.65 E-value=1.1e-08 Score=117.02 Aligned_cols=175 Identities=22% Similarity=0.247 Sum_probs=110.9
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
.-+|+|++|.||||+. +|+.+|||+.+-...+.+..+ .+|.-
T Consensus 21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~i------------------------------------qqei~ 64 (829)
T KOG0576|consen 21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGI------------------------------------QQEIG 64 (829)
T ss_pred eeecCCcccchhhhcccccCchhhheeeeccCCcccccc------------------------------------cccee
Confidence 4699999999999999 699999999764332221111 01100
Q ss_pred HHHHHHHhcCCCCceeeceeeecc--CCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHH--HHHHHHhCCcccc
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEY--TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQILSHGFFHA 452 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~--st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~--~L~qI~~~GffHa 452 (760)
.+ ++..+-.||..+..| ..+.+++||||.|+++.|+..... .+...+++...-+. -++.+|..|=+||
T Consensus 65 ~~-------~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~~Tg-plselqiayvcRetl~gl~ylhs~gk~hR 136 (829)
T KOG0576|consen 65 ML-------RDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLKYLHSQGKIHR 136 (829)
T ss_pred ee-------ecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeecc-cchhHHHHHHHhhhhccchhhhcCCcccc
Confidence 00 011111223323222 235699999999999999754321 12333444332222 2788999999999
Q ss_pred CCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC---CCCCCChHHHHHH
Q 004334 453 DPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV---LVPTGDTTAVRRT 525 (760)
Q Consensus 453 DpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~---~~~~~D~~al~~~ 525 (760)
|+|-+||++++ .|.+++.|||..++++...-.. --.-+.+..|++++..++. .....|.+++...
T Consensus 137 diKGanilltd--~gDvklaDfgvsaqitati~Kr------ksfiGtpywmapEvaaverkggynqlcdiwa~git 204 (829)
T KOG0576|consen 137 DIKGANILLTD--EGDVKLADFGVSAQITATIAKR------KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGIT 204 (829)
T ss_pred cccccceeecc--cCceeecccCchhhhhhhhhhh------hcccCCccccchhHHHHHhcccccccccccccccc
Confidence 99999999997 8999999999999987542211 1124677777777666543 3445677776643
No 429
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.65 E-value=7.4e-07 Score=90.23 Aligned_cols=140 Identities=28% Similarity=0.410 Sum_probs=82.5
Q ss_pred cccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
+|++.|..++||+...++..+++|+-++. .....+.+|+..+
T Consensus 3 ~~l~~G~~n~~~~v~~~~~~~vlK~~~~~--------------------------------------~~~~~~~~e~~~~ 44 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDDGRYVLKFYRPP--------------------------------------DAAERLRREAAVL 44 (239)
T ss_dssp EEEEESSSSEEEEEEETTSEEEEEEESSH--------------------------------------HHHHHHHHHHHHH
T ss_pred ccCCCCCeeeEEEEEECCcEEEEEEeCCC--------------------------------------CCHHHHHHHHHHH
Confidence 68999999999999997689999997763 0112234566666
Q ss_pred HHHHHhcCCCCceeeceeee-----ccCCCeEEEEeecCCCchhh------hh-----------hhhhc-----CCC--H
Q 004334 379 ELFASNFKDMDYVKVPTIFW-----EYTTPQILTMEYVPGIKINR------IQ-----------SLDEL-----GVD--R 429 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~-----e~st~~vLVME~ieG~~L~d------~~-----------~l~~~-----g~d--~ 429 (760)
+.+.+. .+.+|+++. ......+++|+|++|.++.+ .. .+... +.. .
T Consensus 45 ~~l~~~-----~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~ 119 (239)
T PF01636_consen 45 RQLAEH-----GIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWP 119 (239)
T ss_dssp HHHHHT-----TSBS--EEEEEEETEETSEEEEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHH
T ss_pred HHHHhc-----CCCCceEEeecccccccccceEEEEEeccccccccccccccccccccchhhhhhccccccccccccccc
Confidence 666543 137888886 22234689999999998887 00 00011 000 0
Q ss_pred --------H------------------HHHHHHHHHHHHHHH---hCCccccCCCCCcEEEeccCCCcEEEEeecceecc
Q 004334 430 --------K------------------RLGRYAVESYLEQIL---SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 480 (760)
Q Consensus 430 --------~------------------~la~~lv~~~L~qI~---~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l 480 (760)
. .+...+++.+...+. ..+++|+|+||+||++++ .++++.++||+.++.-
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~-~~~~i~iID~e~a~~~ 198 (239)
T PF01636_consen 120 EWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALLPKPLPPVLIHGDLHPGNILVDP-SDGRIGIIDFEDAGWG 198 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCSCEEEE-SS-SGGGEEEES-STTEEEE--GTT-EEE
T ss_pred ccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhhccCCCcEEEEeccccccceeee-ccceeEEEecccceEC
Confidence 0 000001111122222 356999999999999983 3677889999998876
Q ss_pred Ch
Q 004334 481 SP 482 (760)
Q Consensus 481 ~~ 482 (760)
++
T Consensus 199 ~~ 200 (239)
T PF01636_consen 199 DP 200 (239)
T ss_dssp ET
T ss_pred CH
Confidence 54
No 430
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.61 E-value=2.6e-07 Score=94.55 Aligned_cols=106 Identities=21% Similarity=0.250 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHhcCCCCceeeceeeeccC------CCeEEEEeecCCC-chhhhhhhh-hc-CCCHHHHHHHHHHHHH
Q 004334 371 LYQEAANAELFASNFKDMDYVKVPTIFWEYT------TPQILTMEYVPGI-KINRIQSLD-EL-GVDRKRLGRYAVESYL 441 (760)
Q Consensus 371 l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~s------t~~vLVME~ieG~-~L~d~~~l~-~~-g~d~~~la~~lv~~~L 441 (760)
..+|.+++.++.+ .+|.+|+++.-.. ...+|+||+++|. +|.++.... .. ......+... +..++
T Consensus 58 a~~E~~~~~~L~~-----~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~-l~~~i 131 (206)
T PF06293_consen 58 AKREWRNLQRLRE-----AGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRA-LARLI 131 (206)
T ss_pred HHHHHHHHHHHHH-----cCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHH-HHHHH
Confidence 4678888888865 3467777764222 2348999999995 788765431 11 1122333333 44557
Q ss_pred HHHHhCCccccCCCCCcEEEeccC-CCcEEEEeecceeccCh
Q 004334 442 EQILSHGFFHADPHPGNIAVDDVN-GGRLIFYDFGMMGSISP 482 (760)
Q Consensus 442 ~qI~~~GffHaDpHPGNILV~~~~-~g~l~LiDFG~v~~l~~ 482 (760)
..+|..|++|+|++|+|||+++.+ +.++.||||+-+..-..
T Consensus 132 ~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~~ 173 (206)
T PF06293_consen 132 AKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRPS 173 (206)
T ss_pred HHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCCC
Confidence 899999999999999999998621 12799999998876653
No 431
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=98.57 E-value=6.5e-08 Score=102.67 Aligned_cols=135 Identities=15% Similarity=0.175 Sum_probs=81.9
Q ss_pred CCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcC----CCHHHHHHHHHHH--HHHHHHhCCccccCCCCCcEE
Q 004334 387 DMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELG----VDRKRLGRYAVES--YLEQILSHGFFHADPHPGNIA 460 (760)
Q Consensus 387 ~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g----~d~~~la~~lv~~--~L~qI~~~GffHaDpHPGNIL 460 (760)
+.+-+..-+|+-.+....+|+.||.|- .|..+....... +.+.-+-..+.+. -++.+|+.=++|+|+||.|||
T Consensus 86 h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIl 164 (438)
T KOG0666|consen 86 HPNVISLVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANIL 164 (438)
T ss_pred CCcchhHHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEE
Confidence 333455555665555667899999985 455555433222 2222222222221 145567888999999999999
Q ss_pred Eec--cCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCH------HHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004334 461 VDD--VNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDA------DKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 461 V~~--~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~------~~v~~~l~~lG~~~~~~D~~al~~~~~~~l 530 (760)
|.. ++.|++++.|+|+++.+....+ -+...|+ ..+.+.++..--.++..|++++.=+..+++
T Consensus 165 vmgdgperG~VKIaDlGlaR~~~~plk--------pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElL 234 (438)
T KOG0666|consen 165 VMGDGPERGRVKIADLGLARLFNNPLK--------PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELL 234 (438)
T ss_pred EeccCCccCeeEeecccHHHHhhcccc--------ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHH
Confidence 984 1238999999999987654332 2222232 233344444455678889999886655554
No 432
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=98.56 E-value=1.6e-07 Score=102.12 Aligned_cols=180 Identities=13% Similarity=0.143 Sum_probs=111.6
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
.-+|.|.||+|-.+.. .+..|||||.+. +.+ +.+.-.-|.+
T Consensus 95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~---------------V~k----------------------YreAa~iEi~ 137 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWDRETKEHVALKIIKN---------------VDK----------------------YREAALIEIE 137 (415)
T ss_pred hhhcCCcccceEEEeecCCCceehHHHHHH---------------HHH----------------------HhhHHHHHHH
Confidence 4699999999999998 588999997543 111 1111233455
Q ss_pred HHHHHHHhcCC-CCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh-cCCCH---HHHHHHHHHHHHHHHHhCCccc
Q 004334 377 NAELFASNFKD-MDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDR---KRLGRYAVESYLEQILSHGFFH 451 (760)
Q Consensus 377 nl~~f~~~~~~-~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~---~~la~~lv~~~L~qI~~~GffH 451 (760)
-++++.+.-.+ ......-.-+.+|-+..++|.|.+ |.++.|+..... ..+.. ..++..++++ +.-+|..+++|
T Consensus 138 vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~s-v~fLh~~kl~H 215 (415)
T KOG0671|consen 138 VLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLES-VAFLHDLKLTH 215 (415)
T ss_pred HHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHH-HHHHHhcceee
Confidence 55565443211 122333334557888899999987 666777543211 11222 2334444443 56789999999
Q ss_pred cCCCCCcEEEecc------------------CCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC
Q 004334 452 ADPHPGNIAVDDV------------------NGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL 513 (760)
Q Consensus 452 aDpHPGNILV~~~------------------~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~ 513 (760)
.|+||.||++... ..-.|+++|||.+..-.+.. ..++.---..+.+.++.+|.-
T Consensus 216 TDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--------s~iVsTRHYRAPEViLgLGwS 287 (415)
T KOG0671|consen 216 TDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH--------STIVSTRHYRAPEVILGLGWS 287 (415)
T ss_pred cCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc--------ceeeeccccCCchheeccCcC
Confidence 9999999998531 01248999999998765543 122222223455677888985
Q ss_pred CCCCChHHHHHHH
Q 004334 514 VPTGDTTAVRRTA 526 (760)
Q Consensus 514 ~~~~D~~al~~~~ 526 (760)
. +.|+++++=++
T Consensus 288 ~-pCDvWSiGCIL 299 (415)
T KOG0671|consen 288 Q-PCDVWSIGCIL 299 (415)
T ss_pred C-ccCceeeeeEE
Confidence 4 56999877443
No 433
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=98.55 E-value=8.6e-07 Score=90.74 Aligned_cols=184 Identities=18% Similarity=0.183 Sum_probs=111.9
Q ss_pred cccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
..+|.|++|+||++... ..+++|+..+...... .....+.+|+.-+
T Consensus 6 ~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~---------------------------------~~~~~~~~e~~~~ 51 (384)
T COG0515 6 RKLGEGSFGEVYLARDR-KLVALKVLAKKLESKS---------------------------------KEVERFLREIQIL 51 (384)
T ss_pred EeecCCCCeEEEEEEec-cEEEEEeechhhccch---------------------------------hHHHHHHHHHHHH
Confidence 46889999999999998 8899998877433221 1112233444433
Q ss_pred HHHHHhcCCCCceeeceeeeccC--CCeEEEEeecCCCchhhhhhhhhc--CCCHHHHHHHHHH--HHHHHHHhCCcccc
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYT--TPQILTMEYVPGIKINRIQSLDEL--GVDRKRLGRYAVE--SYLEQILSHGFFHA 452 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~s--t~~vLVME~ieG~~L~d~~~l~~~--g~d~~~la~~lv~--~~L~qI~~~GffHa 452 (760)
..+ .+.+ .+...+..+. ...+++|++++|..+.++...... ............+ ..+..+|..|++|+
T Consensus 52 ~~~----~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hr 125 (384)
T COG0515 52 ASL----NHPP--NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHR 125 (384)
T ss_pred HHc----cCCc--ceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 333 2221 2223322222 225999999999999965433221 2333322222222 22568999999999
Q ss_pred CCCCCcEEEeccCCC-cEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc---CCCCCCCChHHHHH
Q 004334 453 DPHPGNIAVDDVNGG-RLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM---GVLVPTGDTTAVRR 524 (760)
Q Consensus 453 DpHPGNILV~~~~~g-~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~l---G~~~~~~D~~al~~ 524 (760)
|++|.||+++. .+ .++++|||++..+.................+...+++++.... .......|.+++..
T Consensus 126 d~kp~nil~~~--~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~ 199 (384)
T COG0515 126 DIKPENILLDR--DGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGI 199 (384)
T ss_pred CCCHHHeeecC--CCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHH
Confidence 99999999985 55 7999999999866544321110011222345666777777765 45666778887663
No 434
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.52 E-value=3.8e-08 Score=101.84 Aligned_cols=183 Identities=16% Similarity=0.176 Sum_probs=100.2
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEec-----CCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQR-----PGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqr-----Pgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l 371 (760)
..+|+|.||.|++|+. .|+.||+|..- -|....--..+++|. .+
T Consensus 23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~-----------------------------~l 73 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQ-----------------------------LL 73 (376)
T ss_pred HhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHH-----------------------------Hh
Confidence 4699999999999998 58889988532 111111111111111 11
Q ss_pred HHH-HHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHH---HHHHHHHHHHHHHhC
Q 004334 372 YQE-AANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRL---GRYAVESYLEQILSH 447 (760)
Q Consensus 372 ~~E-A~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~l---a~~lv~~~L~qI~~~ 447 (760)
.+| ..|+-.+.+.++. +.. .+....+||+.+|+- .|.-+.......+....+ ...++ .-|..||+.
T Consensus 74 kHenv~nliEic~tk~T-p~~-------r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm-~GL~~iHr~ 143 (376)
T KOG0669|consen 74 KHENVVNLIEICRTKAT-PTN-------RDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLM-NGLYYIHRN 143 (376)
T ss_pred cchhHHHHHHHHhhccC-Ccc-------cccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHH-HHHHHHHHh
Confidence 122 2333333322221 111 123446999999974 222222212122233322 22222 336779999
Q ss_pred CccccCCCCCcEEEeccCCCcEEEEeecceeccChhhH---HHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004334 448 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIR---EGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 524 (760)
Q Consensus 448 GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r---~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~ 524 (760)
.++|+|.||.|+||+. +|.++|.|||+++.++.... ..|..-+..+..+.++.+ +.---..+..|++...=
T Consensus 144 kilHRDmKaaNvLIt~--dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEll----LG~r~yg~~iDiWgAgC 217 (376)
T KOG0669|consen 144 KILHRDMKAANVLITK--DGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELL----LGDREYGPPIDIWGAGC 217 (376)
T ss_pred hHHhhcccHhhEEEcC--CceEEeeccccccceecccccCCCCcccceeeeecCCHHHh----hcccccCCcchhHhHHH
Confidence 9999999999999985 89999999999977654321 123333333333333322 22223356778876554
Q ss_pred HH
Q 004334 525 TA 526 (760)
Q Consensus 525 ~~ 526 (760)
++
T Consensus 218 im 219 (376)
T KOG0669|consen 218 IM 219 (376)
T ss_pred HH
Confidence 43
No 435
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.52 E-value=4.8e-07 Score=93.78 Aligned_cols=188 Identities=14% Similarity=0.063 Sum_probs=112.8
Q ss_pred cccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
.-+|.|+|+-||.... +++.+|+|-..-.- ..|++ ...+|+.
T Consensus 27 ~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~----~~~~e--------------------------------~~~rEid 70 (302)
T KOG2345|consen 27 RLLGEGGFSFVDLVKGLSTGHLYALKKILCHS----QEDIE--------------------------------EALREID 70 (302)
T ss_pred eeecCCCceeeeeecccCcccchhhheeeccc----hHHHH--------------------------------HHHHHHH
Confidence 4699999999999986 78899988432211 11111 2234555
Q ss_pred HHHHHHHhcCCCCceeece----e--eeccCCCeEEEEeecCCCchhhhhhh-h--hcCCCHHHHHHHH--HHHHHHHHH
Q 004334 377 NAELFASNFKDMDYVKVPT----I--FWEYTTPQILTMEYVPGIKINRIQSL-D--ELGVDRKRLGRYA--VESYLEQIL 445 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~----v--y~e~st~~vLVME~ieG~~L~d~~~l-~--~~g~d~~~la~~l--v~~~L~qI~ 445 (760)
|-++|.+ ++| ++- + ..+.+...+|+..|..-+++.|.... . ..-++..++.... +-..++++|
T Consensus 71 ~~rkf~s-----~~v-l~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH 144 (302)
T KOG2345|consen 71 NHRKFNS-----PNV-LRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALH 144 (302)
T ss_pred HHHhhCC-----cch-HHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHh
Confidence 5555422 110 000 0 01133456899998887778775432 2 2224555555543 444589999
Q ss_pred hCC--ccccCCCCCcEEEeccCCCcEEEEeecceeccChh--hHHHHHHHHH-HHhhcCHHHHHHHHHHc---CCCCCCC
Q 004334 446 SHG--FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN--IREGLLEAFY-GIYEKDADKVLQAMVQM---GVLVPTG 517 (760)
Q Consensus 446 ~~G--ffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~--~r~~l~~l~~-al~~~D~~~v~~~l~~l---G~~~~~~ 517 (760)
+.. +.|+|+||+||++.+ ++.+++.|||.+...+-. .+.....+-- +--+-+..+=++++... ..+++.+
T Consensus 145 ~~~~~yAH~DiKP~NILls~--~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ert 222 (302)
T KOG2345|consen 145 EKEPPYAHRDIKPANILLSD--SGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERT 222 (302)
T ss_pred ccCCcccccCCCcceeEecC--CCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCccccccc
Confidence 998 999999999999986 789999999999865432 2222221110 10111222334555442 4567788
Q ss_pred ChHHHHHHHHHHH
Q 004334 518 DTTAVRRTAQFFL 530 (760)
Q Consensus 518 D~~al~~~~~~~l 530 (760)
|+++++-.++.++
T Consensus 223 DIWSLGCtLYa~m 235 (302)
T KOG2345|consen 223 DIWSLGCTLYAMM 235 (302)
T ss_pred chhhhhHHHHHHH
Confidence 9999997766553
No 436
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.49 E-value=6.4e-06 Score=85.79 Aligned_cols=164 Identities=23% Similarity=0.260 Sum_probs=94.1
Q ss_pred ccccc-cccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAA-SLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 300 PIasa-SiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
||..| |-++||+...++..++||+..+.- ...+..|++.+
T Consensus 5 ~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~---------------------------------------~~~~~~E~~~l 45 (244)
T cd05150 5 RVTEGQSGATVYRLDGKNPGLYLKIAPSGP---------------------------------------TYELEREAERL 45 (244)
T ss_pred ecCCCCCcCeEEEEcCCCCcEEEEecCCCc---------------------------------------ccchHHHHHHH
Confidence 45554 448999998877899999865521 01234577777
Q ss_pred HHHHHhcCCCCceeeceeeeccCC--CeEEEEeecCCCchhhhhh-----------------hhhc-----CCCH---HH
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYTT--PQILTMEYVPGIKINRIQS-----------------LDEL-----GVDR---KR 431 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~st--~~vLVME~ieG~~L~d~~~-----------------l~~~-----g~d~---~~ 431 (760)
..+.+. +.+|+++..... ..+++|||++|.++.+... +... .... ..
T Consensus 46 ~~l~~~------~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~ 119 (244)
T cd05150 46 RWLAGK------LPVPEVIDYGSDDGRAWLLTSAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRR 119 (244)
T ss_pred HHHHhc------CCCCeEEEEEecCCccEEEEEeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHH
Confidence 766532 678998864433 4699999999998875320 0000 0000 00
Q ss_pred HHH--H-------------------HHHHHHHHHH-------hCCccccCCCCCcEEEeccCCCcEEEEeecceeccChh
Q 004334 432 LGR--Y-------------------AVESYLEQIL-------SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 483 (760)
Q Consensus 432 la~--~-------------------lv~~~L~qI~-------~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~ 483 (760)
+.. . .....+..+. ...++|+|+||+||++++ ++...+|||+.++.=++.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~--~~~~~iIDwe~a~~gdp~ 197 (244)
T cd05150 120 LAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEEDLVVTHGDACLPNIIVDP--GKFSGFIDLGRLGVADRY 197 (244)
T ss_pred HHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCceEEECCCCCCccEEEeC--CcEEEEEEccccccccHH
Confidence 000 0 0111122221 234899999999999985 555789999998865543
Q ss_pred hHHHHHHHHHHHhh--cCHHHHHHHHHHcCC
Q 004334 484 IREGLLEAFYGIYE--KDADKVLQAMVQMGV 512 (760)
Q Consensus 484 ~r~~l~~l~~al~~--~D~~~v~~~l~~lG~ 512 (760)
. .++.++..... ++.......+...|.
T Consensus 198 ~--Dla~~~~~~~~~~~~~~~~~~f~~~Y~~ 226 (244)
T cd05150 198 Q--DLALAVRSLRENLGGEEYAARFLDRYGI 226 (244)
T ss_pred H--HHHHHHHHhhhhcCChHHHHHHHHHcCC
Confidence 2 23333322222 134455555555554
No 437
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=98.49 E-value=2.7e-07 Score=96.63 Aligned_cols=122 Identities=19% Similarity=0.251 Sum_probs=76.4
Q ss_pred CCCeEEEEeecCCCchhhhhhhhhcCCC-HHHHHHHHHHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceec
Q 004334 401 TTPQILTMEYVPGIKINRIQSLDELGVD-RKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS 479 (760)
Q Consensus 401 st~~vLVME~ieG~~L~d~~~l~~~g~d-~~~la~~lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~ 479 (760)
+.--|.||||++-++|..-......|.. .+.++.. +...+..+|..+++|+|+|..||||-+.+.-+++|+|||....
T Consensus 94 ~d~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~q-l~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k 172 (378)
T KOG1345|consen 94 SDAYVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQ-LLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRK 172 (378)
T ss_pred CceEEEeeccCccchhhhhcCcccccHHHHHHHHHH-HHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccc
Confidence 3446899999999888764332222322 3344444 4455788999999999999999999765556999999999887
Q ss_pred cChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHHH
Q 004334 480 ISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQF 528 (760)
Q Consensus 480 l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG-~~~~~~D~~al~~~~~~ 528 (760)
.+..... .+ ....-.+..+.+.+.+-. ...|..|.++|+-.+..
T Consensus 173 ~g~tV~~--~~---~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~ 217 (378)
T KOG1345|consen 173 VGTTVKY--LE---YVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFY 217 (378)
T ss_pred cCceehh--hh---hhcccCCcHHHhhccccceEecccccchheeeeeee
Confidence 6543221 11 111122223333332222 23567799988755433
No 438
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.47 E-value=8e-07 Score=92.54 Aligned_cols=137 Identities=18% Similarity=0.222 Sum_probs=82.3
Q ss_pred ccccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.+||++|.-+-||+. .|..+++|+.+|+... ..+.+|++.
T Consensus 6 ~~~i~~G~t~~~y~~--~~~~~VlR~~~~~~~~--------------------------------------~~i~~E~~~ 45 (226)
T TIGR02172 6 WTQTGEGGNGESYTH--KTGKWMLKLYNPGFDK--------------------------------------ETIKREFDA 45 (226)
T ss_pred heeecCCCCcceeEe--cCCCEEEEeCCCCCCH--------------------------------------HHHHHHHHH
Confidence 379999999999984 3667889988774311 123567777
Q ss_pred HHHHHHhcCCCCceeeceeeec--cCCCeEEEEeecCCCc-hhhhh---------------h----hhhc---CCCHHHH
Q 004334 378 AELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIK-INRIQ---------------S----LDEL---GVDRKRL 432 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e--~st~~vLVME~ieG~~-L~d~~---------------~----l~~~---g~d~~~l 432 (760)
+..+.+ ..+.+|+++.- ......++|||++|.+ +.+.. . +... +......
T Consensus 46 l~~l~~-----~glpvP~~~~~~~~~~~~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~ 120 (226)
T TIGR02172 46 SRKVFS-----LGIPTPHPFDLVEDGGRLGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSY 120 (226)
T ss_pred HHHHHH-----cCCCCCceEEEEecCCeeeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHH
Confidence 777653 23678888753 4455688999999974 11110 0 1110 1010000
Q ss_pred HH-----------------HHHHHHHHHH-HhCCccccCCCCCcEEEeccCCCcEEEEeecceeccCh
Q 004334 433 GR-----------------YAVESYLEQI-LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 482 (760)
Q Consensus 433 a~-----------------~lv~~~L~qI-~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~ 482 (760)
.. ..+..++..+ -...++|+|+|||||++++ ++ +.+|||+.++.=++
T Consensus 121 ~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~~Nii~~~--~~-~~iIDwe~a~~Gdp 185 (226)
T TIGR02172 121 KEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQIGNLITSG--KG-TYWIDLGDFGYGNP 185 (226)
T ss_pred HHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCCCcEEEcC--CC-cEEEechhcCcCCH
Confidence 00 0011111111 0235789999999999985 55 99999998875444
No 439
>PRK10593 hypothetical protein; Provisional
Probab=98.47 E-value=6.6e-06 Score=89.12 Aligned_cols=93 Identities=20% Similarity=0.253 Sum_probs=64.7
Q ss_pred HHHHHHHHHhCCChhhhhcccCccccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCc
Q 004334 276 TAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDG 355 (760)
Q Consensus 276 ~v~~iie~elG~~~~~iF~~fd~~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~ 355 (760)
.+.+.+.+.+|..+. +.++|+.|.+++||+-...+..++||+.+....
T Consensus 3 ~~~~~~~~~~~~~~~------~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~~-------------------------- 50 (297)
T PRK10593 3 QLRAELSHLLGEKLS------RVECISEQPYAALWALYDSQGNPMPLMARSFST-------------------------- 50 (297)
T ss_pred HHHHHHHHHhchhhh------eeeecCCccceeEEEEEcCCCCEEEEEeccccc--------------------------
Confidence 455666666775332 237999999999999988544688898543100
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeecc-----CCCeEEEEeecCCCch
Q 004334 356 AKRDWVAIYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWEY-----TTPQILTMEYVPGIKI 416 (760)
Q Consensus 356 ~~~~l~~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~-----st~~vLVME~ieG~~L 416 (760)
...+..|+.+++.+++. ..|.||+|+... .+..+|||||++|.++
T Consensus 51 ------------~~~~~~Ea~~L~~L~~~----~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 51 ------------PGVAQQEAWKLSMLARS----GTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV 100 (297)
T ss_pred ------------chHHHHHHHHHHHHccC----CCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence 01345788888887542 348999999522 3558999999999876
No 440
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=98.45 E-value=5.3e-08 Score=103.79 Aligned_cols=127 Identities=17% Similarity=0.212 Sum_probs=85.7
Q ss_pred eeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeccCCCcE
Q 004334 392 KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRL 469 (760)
Q Consensus 392 ~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI~~~GffHaDpHPGNILV~~~~~g~l 469 (760)
..|.-..+--.+.++|||++++ .+.++.. ...|-..+.....+ +..+.+|..|++|||+||.||++.. +..+
T Consensus 84 ftP~~~l~~~~e~y~v~e~m~~-nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~--~~~l 157 (369)
T KOG0665|consen 84 FTPQKTLEEFQEVYLVMELMDA-NLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNS--DCTL 157 (369)
T ss_pred cCccccHHHHHhHHHHHHhhhh-HHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecc--hhhe
Confidence 3444333333556999999986 4444433 23454555444433 3368899999999999999999986 8899
Q ss_pred EEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 470 IFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 470 ~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
+++|||.+..-+..++. . -.+..-+..+.+..+.+| ..+.+|+++++=+..+++.
T Consensus 158 Ki~dfg~ar~e~~~~~m--t----pyVvtRyyrapevil~~~-~ke~vdiwSvGci~gEli~ 212 (369)
T KOG0665|consen 158 KILDFGLARTEDTDFMM--T----PYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELIL 212 (369)
T ss_pred eeccchhhcccCccccc--C----chhheeeccCchheeccC-CcccchhhhhhhHHHHHhh
Confidence 99999999877665321 1 112223445566777888 6778899998876666554
No 441
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.40 E-value=1.9e-06 Score=102.23 Aligned_cols=181 Identities=15% Similarity=0.083 Sum_probs=115.2
Q ss_pred ccccccccEEEEEEEC---------CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARLK---------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 370 (760)
Q Consensus 300 PIasaSiGQVhrA~l~---------G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~ 370 (760)
++|+|.||||++|.+. ...||||..+....+.-. +.
T Consensus 303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~-----------------------------------~~ 347 (609)
T KOG0200|consen 303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEK-----------------------------------KD 347 (609)
T ss_pred eeecccccceEeEEEeecccccccceEEEEEEecccccCcHHH-----------------------------------HH
Confidence 9999999999999972 247999987765443111 12
Q ss_pred HHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh---------------cCCCHHHHHHH
Q 004334 371 LYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRKRLGRY 435 (760)
Q Consensus 371 l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~---------------~g~d~~~la~~ 435 (760)
+..|...|....+ |.+.+........ .+..++++||++.+.|.++..... ..+....+...
T Consensus 348 ~~~El~~m~~~g~---H~niv~llG~~t~-~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsf 423 (609)
T KOG0200|consen 348 LMSELNVLKELGK---HPNIVNLLGACTQ-DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSF 423 (609)
T ss_pred HHHHHHHHHHhcC---Ccchhhheeeecc-CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHH
Confidence 2333334443321 2222222222222 456899999999999998765444 11333444333
Q ss_pred HH--HHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcC-----HHHHHHHHH
Q 004334 436 AV--ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKD-----ADKVLQAMV 508 (760)
Q Consensus 436 lv--~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D-----~~~v~~~l~ 508 (760)
.. ..-++.+....++|||+-.-|||+.. +..+++.|||+++...+..-.. ..++ ...|+++.+
T Consensus 424 a~QIa~GMe~L~~~~~vHRDLAaRNVLi~~--~~~~kIaDFGlar~~~~~~~y~--------~~~~~~~LP~kWmApEsl 493 (609)
T KOG0200|consen 424 AYQIANGMEYLASVPCVHRDLAARNVLITK--NKVIKIADFGLARDHYNKDYYR--------TKSSAGTLPVKWMAPESL 493 (609)
T ss_pred HHHHHHHHHHHhhCCccchhhhhhhEEecC--CCEEEEccccceeccCCCCceE--------ecCCCCccceeecCHHHh
Confidence 33 33366677889999999999999985 6789999999999654432110 0111 225566666
Q ss_pred HcCCCCCCCChHHHHHHHHHH
Q 004334 509 QMGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 509 ~lG~~~~~~D~~al~~~~~~~ 529 (760)
.-...+...|+++++..+.++
T Consensus 494 ~~~~ft~kSDVWSfGI~L~Ei 514 (609)
T KOG0200|consen 494 FDRVFTSKSDVWSFGILLWEI 514 (609)
T ss_pred ccCcccccchhhHHHHHHHHH
Confidence 656677788999998765544
No 442
>PRK05231 homoserine kinase; Provisional
Probab=98.39 E-value=4.7e-06 Score=90.35 Aligned_cols=49 Identities=10% Similarity=0.043 Sum_probs=34.9
Q ss_pred CCCCHHHHHHHHHHHhCC-ChhhhhcccCccccccccccEEEEEEECCeeEEEEEec
Q 004334 270 PPFPSETAVSIVEEELGA-PLDDVFERFDVEPIAAASLGQVHRARLKGEEVVVKVQR 325 (760)
Q Consensus 270 pp~p~~~v~~iie~elG~-~~~~iF~~fd~~PIasaSiGQVhrA~l~G~~VAVKVqr 325 (760)
.+.+.+++..++ +.+|. .+. +-++++.|...++|+...++..+++|+.+
T Consensus 5 t~ls~~~l~~~l-~~y~~~~~~------~~~~l~~G~~n~~y~v~t~~g~~vLK~~~ 54 (319)
T PRK05231 5 TDVSDDELAAFL-APYDLGELL------SLKGIAEGIENSNFFLTTTQGEYVLTLFE 54 (319)
T ss_pred ccCCHHHHHHHH-HhcCCchhh------ccchhccccccceEEEEeCCCcEEEEEec
Confidence 456677777777 55664 221 23689999999999998855578999864
No 443
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=98.33 E-value=6e-06 Score=90.36 Aligned_cols=186 Identities=18% Similarity=0.165 Sum_probs=116.8
Q ss_pred ccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCC-ccccchHHHHHHHHHHHHHHHHH
Q 004334 300 PIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSD-GAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 300 PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~-~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
.|.+|--+-||.|+- +|..+||||-+..|----.+|- ++..-..... ..+.++..++.-++ ..|.+|
T Consensus 151 CiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdR--------YV~GEfRFRhgyck~NPRKMVk~WA---EKE~RN 219 (520)
T KOG2270|consen 151 CISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDR--------YVSGEFRFRHGYCKHNPRKMVKTWA---EKEMRN 219 (520)
T ss_pred ccccCccceeEeeecCCCceEEEEEEeeeEEEEechhh--------hccceeeeecccccCCcHHHHHHHH---HHHHHH
Confidence 688899999999999 8999999998776532222221 1110000000 01223444444333 468999
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHH---HHHHHHHHHHHHHHhCCccccCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLEQILSHGFFHADP 454 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~---la~~lv~~~L~qI~~~GffHaDp 454 (760)
+.+++. .+|.+|+++ +-...||||+|+.+-... ...+....+.+.. +-..++...-.+....+++|+||
T Consensus 220 LkRl~~-----aGIP~PePI--lLk~hVLVM~FlGrdgw~-aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADL 291 (520)
T KOG2270|consen 220 LKRLNN-----AGIPCPEPI--LLKNHVLVMEFLGRDGWA-APKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADL 291 (520)
T ss_pred HHHHHh-----cCCCCCCce--eeecceEeeeeccCCCCc-CcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccch
Confidence 999953 457888877 567789999999643221 1112222233222 22222332223334789999999
Q ss_pred CCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC
Q 004334 455 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV 514 (760)
Q Consensus 455 HPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~ 514 (760)
.--|+|+. +|++.+||-+.+...+....-.|+ ..|...+-..+.++|+..
T Consensus 292 SEfN~Lyh---dG~lyiIDVSQSVE~DHP~aldFL-------RmDc~NVn~FF~r~gv~v 341 (520)
T KOG2270|consen 292 SEFNLLYH---DGKLYIIDVSQSVEHDHPHALDFL-------RMDCNNVNDFFRRLGVAV 341 (520)
T ss_pred hhhhheEE---CCEEEEEEccccccCCChhHHHHH-------HHHHHHHHHHHHHcCCee
Confidence 99999997 799999999999888776544333 446777777888888643
No 444
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.26 E-value=1.4e-06 Score=99.10 Aligned_cols=179 Identities=15% Similarity=0.110 Sum_probs=113.9
Q ss_pred cccccccccEEEEEEEC--CeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLK--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAA 376 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~--G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~ 376 (760)
..+|-|-+|.||.|.++ .-.||||..+-+..+ +.| +..||.
T Consensus 273 hKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe---------------------------------veE----FLkEAA 315 (1157)
T KOG4278|consen 273 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---------------------------------VEE----FLKEAA 315 (1157)
T ss_pred eccCCCcccceeeeeeeccceeeehhhhhhcchh---------------------------------HHH----HHHHHH
Confidence 47999999999999994 678999975542111 122 345666
Q ss_pred HHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcC-CCHHHH--HHHHHHHHHHHHHhCCccccC
Q 004334 377 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELG-VDRKRL--GRYAVESYLEQILSHGFFHAD 453 (760)
Q Consensus 377 nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g-~d~~~l--a~~lv~~~L~qI~~~GffHaD 453 (760)
.|+.+. +.+.|..-.|. ...-..|+++|||.-+.|-|++...... +..--+ +...+...+.++-..+|+|+|
T Consensus 316 vMKeik----HpNLVqLLGVC-T~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRD 390 (1157)
T KOG4278|consen 316 VMKEIK----HPNLVQLLGVC-THEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRD 390 (1157)
T ss_pred HHHhhc----CccHHHHhhhh-ccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 666552 22223222221 1223569999999988888876432211 122112 222345567778889999999
Q ss_pred CCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004334 454 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 526 (760)
Q Consensus 454 pHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~ 526 (760)
+-..|-||.+ +.-+++.|||+++.++.++-.+- |-..--...-+++-+......-..|+++|...+
T Consensus 391 LAARNCLVgE--nhiVKvADFGLsRlMtgDTYTAH-----AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLL 456 (1157)
T KOG4278|consen 391 LAARNCLVGE--NHIVKVADFGLSRLMTGDTYTAH-----AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLL 456 (1157)
T ss_pred hhhhhccccc--cceEEeeccchhhhhcCCceecc-----cCccCcccccCcccccccccccchhhHHHHHHH
Confidence 9999999986 77899999999998877653221 212223344455555555556678999988654
No 445
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=98.22 E-value=2.1e-05 Score=88.58 Aligned_cols=87 Identities=22% Similarity=0.238 Sum_probs=58.9
Q ss_pred CccccccccccEEEEEEE-CC-eeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH
Q 004334 297 DVEPIAAASLGQVHRARL-KG-EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (760)
Q Consensus 297 d~~PIasaSiGQVhrA~l-~G-~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E 374 (760)
+.++++.|-+..||+..+ +| +.|+||...|-++.. + ..|.--. .....|
T Consensus 30 ~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~-------------------g------~~wpl~~----eR~~~E 80 (401)
T PRK09550 30 TAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVV-------------------G------ESWPLTL----DRARIE 80 (401)
T ss_pred eeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccc-------------------c------ccccccH----HHHHHH
Confidence 447899999999999999 55 599999877642210 0 0111000 123456
Q ss_pred HHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCch
Q 004334 375 AANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKI 416 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L 416 (760)
++.+..+.+. ....+|+||.......++||||+++.++
T Consensus 81 ae~L~~l~~~----~p~~VPkV~~~D~~~~~lVME~L~~~~~ 118 (401)
T PRK09550 81 AEALKIQAKY----VPDLVPKVYHYDEELAVTVMEDLSDHKI 118 (401)
T ss_pred HHHHHHHHhh----CCCCCCeEEEECCCCCEEEEecCCCccH
Confidence 7777776543 2357999998777778999999998653
No 446
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.20 E-value=1.3e-05 Score=83.29 Aligned_cols=34 Identities=41% Similarity=0.708 Sum_probs=27.0
Q ss_pred CCccccCCCCCcEEEeccCCCcEEEEeecceeccCh
Q 004334 447 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 482 (760)
Q Consensus 447 ~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~ 482 (760)
.+++|+|+||+||++++ ++-..++||+.+..=++
T Consensus 164 ~~l~HGD~~~~Nvlv~~--~~i~giIDw~~a~~gDp 197 (235)
T cd05155 164 PVWFHGDLAPGNLLVQD--GRLSAVIDFGCLGVGDP 197 (235)
T ss_pred ceEEeCCCCCCcEEEEC--CCEEEEEeCcccCcCCh
Confidence 45899999999999973 33346999999876554
No 447
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.20 E-value=1.3e-05 Score=80.24 Aligned_cols=125 Identities=25% Similarity=0.375 Sum_probs=88.5
Q ss_pred cccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
.-+|-|..+-||.+.+.|.+||+|+||++- ...++..||+.+
T Consensus 28 ~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds--------------------------------------~r~~l~kEakiL 69 (201)
T COG2112 28 KELAKGTTSVVYLGEWRGGEVALKVRRRDS--------------------------------------PRRNLEKEAKIL 69 (201)
T ss_pred hhhhcccccEEEEeeccCceEEEEEecCCc--------------------------------------chhhHHHHHHHH
Confidence 458999999999999999999999999842 123566778777
Q ss_pred HHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCC-C-
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPH-P- 456 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDpH-P- 456 (760)
+..... -..|++| +-++..+.|||++|.+|.++... .+++.+...+=.+| -+=..|+-|..+| |
T Consensus 70 eil~g~------~~~p~vy--~yg~~~i~me~i~G~~L~~~~~~----~~rk~l~~vlE~a~--~LD~~GI~H~El~~~~ 135 (201)
T COG2112 70 EILAGE------GVTPEVY--FYGEDFIRMEYIDGRPLGKLEIG----GDRKHLLRVLEKAY--KLDRLGIEHGELSRPW 135 (201)
T ss_pred HHhhhc------CCCceEE--EechhhhhhhhhcCcchhhhhhc----ccHHHHHHHHHHHH--HHHHhccchhhhcCCc
Confidence 766432 2468888 33566777999999999876431 25555544333322 1335788898888 3
Q ss_pred CcEEEeccCCCcEEEEeeccee
Q 004334 457 GNIAVDDVNGGRLIFYDFGMMG 478 (760)
Q Consensus 457 GNILV~~~~~g~l~LiDFG~v~ 478 (760)
-||++. ++++.+|||--+.
T Consensus 136 k~vlv~---~~~~~iIDFd~At 154 (201)
T COG2112 136 KNVLVN---DRDVYIIDFDSAT 154 (201)
T ss_pred eeEEec---CCcEEEEEccchh
Confidence 366664 5699999998776
No 448
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.19 E-value=1.1e-06 Score=107.22 Aligned_cols=128 Identities=6% Similarity=-0.088 Sum_probs=77.7
Q ss_pred CeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEec-----------------
Q 004334 403 PQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDD----------------- 463 (760)
Q Consensus 403 ~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l--v~~~L~qI~~~GffHaDpHPGNILV~~----------------- 463 (760)
..+++|||++ .+|.++.......++...+...+ +-..+..+|..|++|+|+||.|||+..
T Consensus 54 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~ 132 (793)
T PLN00181 54 SIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 132 (793)
T ss_pred hhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccc
Confidence 3578899874 48888764333334444443332 223478899999999999999999963
Q ss_pred cCCCcEEEEeecceeccChhhHHHHHHH----------HHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 464 VNGGRLIFYDFGMMGSISPNIREGLLEA----------FYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 464 ~~~g~l~LiDFG~v~~l~~~~r~~l~~l----------~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
..++.+++.|||+++.........+... ......+++.+++++++..+......|++++.-.+.+++.
T Consensus 133 ~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~ 210 (793)
T PLN00181 133 DEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFC 210 (793)
T ss_pred cccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhh
Confidence 1133455555555543221000000000 0011124556888988776667788999999988877764
No 449
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=98.16 E-value=5.5e-06 Score=89.41 Aligned_cols=162 Identities=21% Similarity=0.297 Sum_probs=110.9
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
+.||-|.-.-||.+-. +|++.++|+-|-|- ..++.++.=-.++.+.. .-.|.-+-. + .-.+|-+.
T Consensus 98 nqIGVGKESDIY~v~d~~G~~~~lK~HRLGR-----tSFR~Vk~kRDY~r~r~------~~sWlyLSR-l--aa~kEfaf 163 (465)
T KOG2268|consen 98 NQIGVGKESDIYVVADEEGNPLILKLHRLGR-----TSFRNVKNKRDYLRKRK------SGSWLYLSR-L--AATKEFAF 163 (465)
T ss_pred cccccccccceEEEecCCCCchhHHHHhhhh-----hhHHHhhhhhhhHhcCC------ccchhhhHH-H--HHHHHHHH
Confidence 4688999999999999 69999999877652 12222222222222211 112433211 1 12356667
Q ss_pred HHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPG 457 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~GffHaDpHPG 457 (760)
|+.+.+ ....||+++ .+++.++|||+++|.+|.++... .++..+...++.. +.-+-.+|++|||-.--
T Consensus 164 mkaL~e-----~gfpVPkpi--D~~RH~Vvmelv~g~Pl~~v~~v----~d~~~ly~~lm~~-Iv~la~~GlIHgDFNEF 231 (465)
T KOG2268|consen 164 MKALYE-----RGFPVPKPI--DHNRHCVVMELVDGYPLRQVRHV----EDPPTLYDDLMGL-IVRLANHGLIHGDFNEF 231 (465)
T ss_pred HHHHHH-----cCCCCCCcc--cccceeeHHHhhcccceeeeeec----CChHHHHHHHHHH-HHHHHHcCceecccchh
Confidence 777654 346899988 46789999999999999876433 3455565555543 44567899999999999
Q ss_pred cEEEeccCCCcEEEEeecceeccChhhHHHH
Q 004334 458 NIAVDDVNGGRLIFYDFGMMGSISPNIREGL 488 (760)
Q Consensus 458 NILV~~~~~g~l~LiDFG~v~~l~~~~r~~l 488 (760)
||+|.+ ++++++|||-.+.+.+......|
T Consensus 232 Nimv~d--d~~i~vIDFPQmvS~sh~nA~~Y 260 (465)
T KOG2268|consen 232 NIMVKD--DDKIVVIDFPQMVSTSHPNAEYY 260 (465)
T ss_pred eeEEec--CCCEEEeechHhhccCCCcccee
Confidence 999986 88999999999988887655443
No 450
>PLN02756 S-methyl-5-thioribose kinase
Probab=98.14 E-value=4.6e-05 Score=85.78 Aligned_cols=109 Identities=16% Similarity=0.256 Sum_probs=67.3
Q ss_pred CCCCCCHHHHHHHHHHH------hCCChhhhhcccCccccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHH
Q 004334 268 QVPPFPSETAVSIVEEE------LGAPLDDVFERFDVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRV 341 (760)
Q Consensus 268 ~vpp~p~~~v~~iie~e------lG~~~~~iF~~fd~~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~ 341 (760)
...+++.+.+..-+.+. +|.. +.....+++|.|.+-.||+-...+..|+||...|.++..
T Consensus 5 ~y~~l~~~~l~~yl~~~~~~~~~l~g~----~~~l~~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~v---------- 70 (418)
T PLN02756 5 EFRPLDEKSLVEYIKATPALSSKIGND----LDDLKIKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCI---------- 70 (418)
T ss_pred ccccCCHHHHHHHHHHccchhhhcCCC----CCCceEEEcCCCceeeEEEEEcCCccEEEEeCCccccCC----------
Confidence 34456666665555443 3321 122345789999999999988777789999888765311
Q ss_pred HHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCC
Q 004334 342 IAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPG 413 (760)
Q Consensus 342 la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG 413 (760)
+ -+|.--. ..-..|++.+....+. ..+.+|+||.-.....+++|||++|
T Consensus 71 ---------g------a~wpl~~----~R~~~Ea~aL~~~~~~----~p~~VPkVy~~ded~~vlvME~L~~ 119 (418)
T PLN02756 71 ---------G------ESWPMTK----ERAYFEATALREHGRL----CPDHVPEVYHFDRTMALIGMRYLEP 119 (418)
T ss_pred ---------C------ccccCCc----cHHHHHHHHHHHhhhc----CCCCCCeEEEECCCCCEEEEeecCC
Confidence 0 0110000 0112345555555432 3368999997666778999999988
No 451
>PRK12396 5-methylribose kinase; Reviewed
Probab=98.05 E-value=4.6e-05 Score=85.40 Aligned_cols=113 Identities=15% Similarity=0.136 Sum_probs=70.3
Q ss_pred CCCCCCHHHHHHHHHHHhCCChhhhhcccCccccccccccEEEEEEEC--CeeEEEEEecCCchhhHHHHHHHHHHHHHH
Q 004334 268 QVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLK--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEY 345 (760)
Q Consensus 268 ~vpp~p~~~v~~iie~elG~~~~~iF~~fd~~PIasaSiGQVhrA~l~--G~~VAVKVqrPgi~~~i~~DL~iL~~la~~ 345 (760)
...|+..+++..-+.+.+|. +..- +...-++||-|-..-||++.+. ++.|+||--.|-++-
T Consensus 6 ~y~~l~~~~v~~yl~~~l~~-~~~~-~~~~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv--------------- 68 (409)
T PRK12396 6 KYFLMEANDVIVYVKEKLSK-FEHA-KGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARI--------------- 68 (409)
T ss_pred cceeCCHhHHHHHHHHhcCC-CCCc-ccceeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhcc---------------
Confidence 44566666666666655551 1000 2233579999999999999984 678999976663220
Q ss_pred HhhhCCCCCccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCch
Q 004334 346 LQKIDPKSDGAKRDWVAIYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKI 416 (760)
Q Consensus 346 l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L 416 (760)
. .+|.--. +..+-|+..++.+.+... -.+|++|.......++|||+++...+
T Consensus 69 ----~-------~swpL~~----~R~~~E~~aL~~~~~~~P----~~VP~vy~~D~e~~~~vMEdL~~~~i 120 (409)
T PRK12396 69 ----S-------DEFKLST----NRIRIESDVLQLEEELAP----GLVPKVYLFDSVMNCCVMEDLSDHTI 120 (409)
T ss_pred ----C-------CCCCCCh----HHHHHHHHHHHHHHhhCC----CcCCeEEEECcHHhhHHHHhCcccHH
Confidence 0 0111101 123456677776655432 24999998777778999999976443
No 452
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=98.05 E-value=2.8e-05 Score=83.27 Aligned_cols=32 Identities=25% Similarity=0.241 Sum_probs=27.2
Q ss_pred CCccccCCCCCcEEEeccCCCcEEEEeecceecc
Q 004334 447 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 480 (760)
Q Consensus 447 ~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l 480 (760)
.+++|+|+||+||++++ ++.+.++||+.++.=
T Consensus 175 ~~l~HgD~~~~Nil~~~--~~~~~iIDfe~a~~g 206 (296)
T cd05153 175 RGVIHADLFRDNVLFDG--DELSGVIDFYFACTD 206 (296)
T ss_pred CcCCccCcCcccEEEeC--CceEEEeehhhhcCc
Confidence 58999999999999984 555689999988764
No 453
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.01 E-value=0.00023 Score=74.95 Aligned_cols=138 Identities=20% Similarity=0.201 Sum_probs=81.8
Q ss_pred cccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
.++..|-..++|+...+|+.+++|+..++.... . -...+|.+++
T Consensus 2 ~~~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~-~-----------------------------------~~r~~E~~~l 45 (256)
T TIGR02721 2 QTLSGGLTNRSWRIEHPGISFVWRPQSPVCKAL-G-----------------------------------VDRQREYQIL 45 (256)
T ss_pred CcCCCcCcCCeEEEEeCCccEEEeeCCcccccc-c-----------------------------------CcHHHHHHHH
Confidence 367778888999998888899999755531110 0 0013455566
Q ss_pred HHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhh--------hh-------hhhc---C--CCHH-HHHHH--
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRI--------QS-------LDEL---G--VDRK-RLGRY-- 435 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~--------~~-------l~~~---g--~d~~-~la~~-- 435 (760)
..+.+. .+ .|+++.. ...+++|||++|.+++.- .. +... + .+.. .+...
T Consensus 46 ~~l~~~-----g~-~P~~i~~--~~~~~v~e~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~ 117 (256)
T TIGR02721 46 QALSAL-----GL-APKPILV--NEHWLLVEWLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWL 117 (256)
T ss_pred HHHHhc-----CC-CCceEEE--eCCEEEEEeccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHH
Confidence 665431 12 5888754 346899999999887531 00 1111 1 1111 11110
Q ss_pred ---------HHHHHHHHHH--------hCCccccCCCCCcEEEeccCCCcEEEEeecceeccChh
Q 004334 436 ---------AVESYLEQIL--------SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 483 (760)
Q Consensus 436 ---------lv~~~L~qI~--------~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~ 483 (760)
.+...++.+. ...+.|+|+||+||++++ ++ +.+|||..++.=++.
T Consensus 118 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~--~~-~~lIDwE~a~~gdp~ 179 (256)
T TIGR02721 118 QIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTP--QG-LKLIDWEYASDGDIA 179 (256)
T ss_pred hcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeC--CC-CEEEeccccCcCCHH
Confidence 0111122222 235899999999999985 44 899999999876654
No 454
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.93 E-value=4.8e-05 Score=82.22 Aligned_cols=94 Identities=21% Similarity=0.332 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHhCCChhhhhcccCccccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCC
Q 004334 274 SETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKS 353 (760)
Q Consensus 274 ~~~v~~iie~elG~~~~~iF~~fd~~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~ 353 (760)
|..+.+.|.+.+|.+..- -+.+|++.|++.++|+...+++.+-||+.......
T Consensus 2 w~~i~~~~~~~~~~~~~i----~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~~~~~----------------------- 54 (288)
T PF03881_consen 2 WQAIEQQISEQLGADFKI----TSIEPVSGGDINEAYRLDTDGGSYFVKVNSESGRD----------------------- 54 (288)
T ss_dssp HHHHHHHHHHHHTS---------EEEEE--SSSSEEEEEETTS-EEEEEEEEGGGCC-----------------------
T ss_pred hHHHHHHHHHHhCCCCce----eeeEecCCCChhheEEEECCCccEEEEecChhhHH-----------------------
Confidence 567888999999976211 12379999999999999988999999997642222
Q ss_pred CccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeec--cCCCeEEEEeecCCC
Q 004334 354 DGAKRDWVAIYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGI 414 (760)
Q Consensus 354 ~~~~~~l~~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e--~st~~vLVME~ieG~ 414 (760)
.+..|+..++.+++. ..+.+|+|+.- +.+..+|+|||++..
T Consensus 55 ----------------~f~~Ea~gL~~L~~~----~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 55 ----------------MFEGEAEGLKALAEA----NPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp ----------------HHHHHHHHHHHHCHT----TTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred ----------------HHHHHHHHHHHHHhc----CCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 234567777777442 34789998863 345679999999977
No 455
>PRK06148 hypothetical protein; Provisional
Probab=97.92 E-value=0.0003 Score=88.20 Aligned_cols=55 Identities=18% Similarity=0.427 Sum_probs=43.8
Q ss_pred hhcCCCCCCHHHHHHHHHHHhCCChhhhhcccCccccccccccEEEEEEE-CCeeEEEEEecCC
Q 004334 265 LQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL-KGEEVVVKVQRPG 327 (760)
Q Consensus 265 Lqd~vpp~p~~~v~~iie~elG~~~~~iF~~fd~~PIasaSiGQVhrA~l-~G~~VAVKVqrPg 327 (760)
+....|+++.+++.+++++.+|..- +.+||++ ..-++|+... +|+.+++|+.+|+
T Consensus 4 ~~~~~p~~s~~~~~~~~~~~ygl~~-------~~~~L~s-~~d~nf~v~~~~g~~yVLKi~~~~ 59 (1013)
T PRK06148 4 LSHPAPEFTTKDAEALLAQHFGISA-------TATPLDG-ERDLNFRLTTDDGADYILKIVNPS 59 (1013)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCce-------EEeecCC-cCCceEEEEeCCCCeEEEEEcCCc
Confidence 4456789999999999999999642 1257754 4688999988 6889999999985
No 456
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=97.86 E-value=0.00012 Score=79.00 Aligned_cols=164 Identities=19% Similarity=0.200 Sum_probs=81.4
Q ss_pred ccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEA 375 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA 375 (760)
..+||.|+++-||++++ +|+++|||+-.-.- +.-..+.+.++.-.-....+.+. .+.. +|
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-~~~~~~~~~~~~e~l~~~~~~~~-----~~p~------------~a 78 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-DASANEYEQLKEEQLAITLFPGV-----KNPK------------EA 78 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESS-TTHTTHHHHHHHHHHGGGGSTT-------SHH------------HH
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEeccc-ccchHHHHHHHHHHHHhhhhccC-----CCHH------------HH
Confidence 36899999999999999 68999999865322 22233444333322221111000 0111 11
Q ss_pred HHHHHHHHhcCCCCceeec---eeeeccC-------CCeEEEEeecCCCchhhhhh-hhhcCCC---HHHHHHHHH----
Q 004334 376 ANAELFASNFKDMDYVKVP---TIFWEYT-------TPQILTMEYVPGIKINRIQS-LDELGVD---RKRLGRYAV---- 437 (760)
Q Consensus 376 ~nl~~f~~~~~~~~~V~VP---~vy~e~s-------t~~vLVME~ieG~~L~d~~~-l~~~g~d---~~~la~~lv---- 437 (760)
..-.+ .+...+-+.+| ..+..-+ -..++.|.-+.+ +|.++.. +...... ....++..+
T Consensus 79 ~~~~r---~l~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~ 154 (288)
T PF14531_consen 79 YRHLR---FLVPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQM 154 (288)
T ss_dssp HHHH----B---SEEEEETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHH
T ss_pred HHhce---EEeeeEEEEEcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHH
Confidence 11111 11122223332 1111111 034677777754 4555432 1111111 112222211
Q ss_pred HHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhH
Q 004334 438 ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIR 485 (760)
Q Consensus 438 ~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r 485 (760)
-.....+|..|++|+|++|.|++++. +|.+.|.||+.+.+......
T Consensus 155 I~lvA~Lh~~GlVHgdi~~~nfll~~--~G~v~Lg~F~~~~r~g~~~~ 200 (288)
T PF14531_consen 155 IRLVANLHSYGLVHGDIKPENFLLDQ--DGGVFLGDFSSLVRAGTRYR 200 (288)
T ss_dssp HHHHHHHHHTTEEEST-SGGGEEE-T--TS-EEE--GGGEEETTEEEE
T ss_pred HHHHHHHhhcceEecccceeeEEEcC--CCCEEEcChHHHeecCceee
Confidence 12356689999999999999999986 89999999999988766543
No 457
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.84 E-value=0.00017 Score=78.13 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=28.2
Q ss_pred hCCccccCCCCCcEEEeccCCCcEEEEeecceeccC
Q 004334 446 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS 481 (760)
Q Consensus 446 ~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~ 481 (760)
..+++|+|+||+||++++ ++...++||+.++.=.
T Consensus 186 ~~~l~HgD~~~~Nvl~~~--~~~~~vIDfd~~~~~~ 219 (307)
T TIGR00938 186 PRGVIHADLFPDNVLFDG--DSVKGVIDFYFACTDA 219 (307)
T ss_pred CCccCCCCCCcCcEEEEC--CceEEEeecccccCcc
Confidence 368999999999999985 5556899999887543
No 458
>PRK09902 hypothetical protein; Provisional
Probab=97.82 E-value=0.00043 Score=71.53 Aligned_cols=148 Identities=18% Similarity=0.145 Sum_probs=96.3
Q ss_pred ccCccccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHH
Q 004334 295 RFDVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (760)
Q Consensus 295 ~fd~~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~E 374 (760)
.+|+---+-|+.+.|++-.+.|+.+-||-|.-.+...+. + |. + ..++.+|
T Consensus 20 wve~pN~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r---------------~-P~--g------------~ptf~rE 69 (216)
T PRK09902 20 WVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVR---------------Y-PF--G------------RPTIVRE 69 (216)
T ss_pred eecCCCcCCCCcceEEEEEeCCcEEEEEeccCccccccc---------------C-CC--C------------chHHHHH
Confidence 344433556899999999988989999987543332200 0 11 0 1246678
Q ss_pred HHHHHHHHHhcCCCCceeeceeeecc------CCCeEEEEeecCC-Cchhhhhhhhhc---CCCHHHHHHHHHHHHHHHH
Q 004334 375 AANAELFASNFKDMDYVKVPTIFWEY------TTPQILTMEYVPG-IKINRIQSLDEL---GVDRKRLGRYAVESYLEQI 444 (760)
Q Consensus 375 A~nl~~f~~~~~~~~~V~VP~vy~e~------st~~vLVME~ieG-~~L~d~~~l~~~---g~d~~~la~~lv~~~L~qI 444 (760)
-.++.++.+. +|.+|++...- .-+.+||+|-++| .+|.++...... +...+.-.-..+...+.++
T Consensus 70 ~~~L~~L~~~-----GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~L 144 (216)
T PRK09902 70 VAVIKELERA-----GVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKM 144 (216)
T ss_pred HHHHHHHHHc-----CCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHH
Confidence 8888888653 35577766221 1236999999987 477665422111 1122222333345568999
Q ss_pred HhCCccccCCCCCcEEEeccCCCc--EEEEeecceec
Q 004334 445 LSHGFFHADPHPGNIAVDDVNGGR--LIFYDFGMMGS 479 (760)
Q Consensus 445 ~~~GffHaDpHPGNILV~~~~~g~--l~LiDFG~v~~ 479 (760)
|..|+.|+||-|-||+++. +|+ +.||||--++.
T Consensus 145 H~~Gv~Hgdly~khIll~~--~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 145 HSVNRQHGCCYVRHIYVKT--EGKAEAGFLDLEKSRR 179 (216)
T ss_pred HHCCCcCCCCCHhheeecC--CCCeeEEEEEhhccch
Confidence 9999999999999999985 445 99999976554
No 459
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.80 E-value=0.00016 Score=81.32 Aligned_cols=136 Identities=15% Similarity=0.178 Sum_probs=79.7
Q ss_pred hhhhhc---ccCccccccccccEEEEEEE--CCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHH
Q 004334 289 LDDVFE---RFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAI 363 (760)
Q Consensus 289 ~~~iF~---~fd~~PIasaSiGQVhrA~l--~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i 363 (760)
+.++|. +.-...+|=|-|..||.|.+ ..+.||+||++-.-
T Consensus 71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq----------------------------------- 115 (590)
T KOG1290|consen 71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ----------------------------------- 115 (590)
T ss_pred ccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-----------------------------------
Confidence 456665 23346899999999999999 47899999998620
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCC-CCceeeceeeeccC------CCeEEEEeecCCCchhhhhhh-hhcCCCH---HHH
Q 004334 364 YDECASVLYQEAANAELFASNFKD-MDYVKVPTIFWEYT------TPQILTMEYVPGIKINRIQSL-DELGVDR---KRL 432 (760)
Q Consensus 364 ~~E~~~~l~~EA~nl~~f~~~~~~-~~~V~VP~vy~e~s------t~~vLVME~ieG~~L~d~~~l-~~~g~d~---~~l 432 (760)
.+.+.-..|.+.+.+++.--.+ ...=.|-+.+..+. ...+||.|++ |..|-.++.- .-.|+.. ++|
T Consensus 116 --hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I 192 (590)
T KOG1290|consen 116 --HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEI 192 (590)
T ss_pred --HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHH
Confidence 1111223344444444432211 11223344443331 2358888987 5555554322 2223332 333
Q ss_pred HHHHHHHHHHHHH-hCCccccCCCCCcEEEec
Q 004334 433 GRYAVESYLEQIL-SHGFFHADPHPGNIAVDD 463 (760)
Q Consensus 433 a~~lv~~~L~qI~-~~GffHaDpHPGNILV~~ 463 (760)
++.++ ..|.++| +.|++|.|+||.|||+..
T Consensus 193 ~~qvL-~GLdYLH~ecgIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 193 CRQVL-TGLDYLHRECGIIHTDLKPENVLLCS 223 (590)
T ss_pred HHHHH-HHHHHHHHhcCccccCCCcceeeeec
Confidence 33333 2367778 579999999999999863
No 460
>PRK06149 hypothetical protein; Provisional
Probab=97.69 E-value=0.00041 Score=86.73 Aligned_cols=58 Identities=16% Similarity=0.216 Sum_probs=43.3
Q ss_pred HHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhcccCccccccccccEEEEEEECCeeEEEEEecCC
Q 004334 262 LSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLKGEEVVVKVQRPG 327 (760)
Q Consensus 262 L~~Lqd~vpp~p~~~v~~iie~elG~~~~~iF~~fd~~PIasaSiGQVhrA~l~G~~VAVKVqrPg 327 (760)
+..+....|.++.+++.+++++.+|..- + ..++++..- ++|+.+.++..+++|+-+|+
T Consensus 7 ~~~~~~~~p~ls~~~~~~ll~~~ygl~~-~------~~~L~s~~d-~nf~v~t~~~~yVLKi~~~~ 64 (972)
T PRK06149 7 IDRSSLPAPDVSEAQAERILAEHYGLSG-T------LTELGSQQD-RNFRVDSDGGRFVLKICHAA 64 (972)
T ss_pred hccCCCCCCCCCHHHHHHHHHHhcCCce-E------EEecCCcCc-ceEEEEecCCcEEEEeCCcc
Confidence 3446667899999999999999998641 1 246665544 78988876567888999885
No 461
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.68 E-value=0.00047 Score=71.21 Aligned_cols=35 Identities=26% Similarity=0.362 Sum_probs=28.8
Q ss_pred CCccccCCCCCcEEEeccCCCcEEEEeecceeccCh
Q 004334 447 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 482 (760)
Q Consensus 447 ~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~ 482 (760)
.++.|+|+||+||++++ .++.+.+|||-.++.-++
T Consensus 170 ~~l~H~Dl~~~Nil~~~-~~~~~~lIDwe~a~~~~~ 204 (235)
T cd05157 170 IVFCHNDLLSGNIIYNE-EKNSVKFIDYEYAGYNYR 204 (235)
T ss_pred EEEEcCCCCcCcEEEeC-CCCCEEEEEcccCCcCch
Confidence 36999999999999984 246799999998876554
No 462
>PLN02876 acyl-CoA dehydrogenase
Probab=97.67 E-value=0.00045 Score=84.96 Aligned_cols=107 Identities=16% Similarity=0.212 Sum_probs=66.1
Q ss_pred CCCHHHHHHHHHHHhCCChhhhhcccCccccccccccEEEEEEEC-C---eeEEEEEecCCchhhHHHHHHHHHHHHHHH
Q 004334 271 PFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLK-G---EEVVVKVQRPGLKDLFDIDLKNLRVIAEYL 346 (760)
Q Consensus 271 p~p~~~v~~iie~elG~~~~~iF~~fd~~PIasaSiGQVhrA~l~-G---~~VAVKVqrPgi~~~i~~DL~iL~~la~~l 346 (760)
+++.+.+..-+.+.++. +..-...+..++++.|....+|+-... | ..+++|...|+....
T Consensus 17 ~~d~~~l~~~l~~~~~~-~~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~--------------- 80 (822)
T PLN02876 17 RFDEDALLRYAAANVAG-FPVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ--------------- 80 (822)
T ss_pred cCCHHHHHHHHHHhCCC-cCCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc---------------
Confidence 35666666666655431 111111234578999999999998874 2 578888765542100
Q ss_pred hhhCCCCCccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeeccC-----CCeEEEEeecCCCchh
Q 004334 347 QKIDPKSDGAKRDWVAIYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWEYT-----TPQILTMEYVPGIKIN 417 (760)
Q Consensus 347 ~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~s-----t~~vLVME~ieG~~L~ 417 (760)
....+.+|++.++.+.. ...+.+|++|.... +..++||||++|..+.
T Consensus 81 --------------------~~~~~~rE~~~l~~L~~----~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~ 132 (822)
T PLN02876 81 --------------------SAHAVEREYQVLRALGE----HTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFV 132 (822)
T ss_pred --------------------cHHHHHHHHHHHHHHhh----cCCCCCCcEEEEecCCCcCCCceEEEEecCCcccC
Confidence 01124567777776642 24588999987433 3468999999998653
No 463
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.57 E-value=0.0031 Score=67.77 Aligned_cols=34 Identities=29% Similarity=0.480 Sum_probs=28.3
Q ss_pred CccccCCCCCcEEEeccCCCc-EEEEeecceeccChh
Q 004334 448 GFFHADPHPGNIAVDDVNGGR-LIFYDFGMMGSISPN 483 (760)
Q Consensus 448 GffHaDpHPGNILV~~~~~g~-l~LiDFG~v~~l~~~ 483 (760)
.++|+|+||+||++++ +++ ..++||+.++.=++.
T Consensus 186 ~lvHGD~~~~Nilv~~--~~~~~gviDWe~a~iGDPa 220 (276)
T cd05152 186 VLVHGDLHPGHILIDE--DARVTGLIDWTEAKVGDPA 220 (276)
T ss_pred eeEeCCCCCCcEEEeC--CCCEEEEECcHhcccCCHH
Confidence 4899999999999984 366 469999999877664
No 464
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.50 E-value=0.0011 Score=73.67 Aligned_cols=83 Identities=22% Similarity=0.233 Sum_probs=52.4
Q ss_pred cccccccEEEEEEEC-C-eeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHHH
Q 004334 301 IAAASLGQVHRARLK-G-EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAANA 378 (760)
Q Consensus 301 IasaSiGQVhrA~l~-G-~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~nl 378 (760)
||-|-..-||+.... | +.|+||--.|-++. . +. +|.--.+ ...-|+..+
T Consensus 3 igdGnlN~VfrV~~~~g~~svIVKQAlp~vRv------------------~-g~------~wpl~~~----R~~~E~~~L 53 (370)
T TIGR01767 3 VGDGNLNLVFHVYDQEGDRAAIVKQALPYVRV------------------V-GE------SWPLTLD----RARIESSAL 53 (370)
T ss_pred CCCCceEEEEEEEcCCCCeeEEEEEcCHHHhh------------------c-CC------CCCCCcc----HHHHHHHHH
Confidence 688999999999984 3 68999976663221 0 00 1110011 123466666
Q ss_pred HHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCch
Q 004334 379 ELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKI 416 (760)
Q Consensus 379 ~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L 416 (760)
....+.. | -.+|++|.......+++||+++...+
T Consensus 54 ~~~~~~~---P-~~vP~vy~~D~e~~~~vMEdL~~~~i 87 (370)
T TIGR01767 54 IRQGEHV---P-HLVPRIFHFDTEMAVTVMEDLSHHKI 87 (370)
T ss_pred HHhhccC---c-cccCeEEEEccccceehHhhCccchH
Confidence 6554432 2 26999998777788999999966443
No 465
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=97.34 E-value=0.0009 Score=73.76 Aligned_cols=45 Identities=20% Similarity=0.346 Sum_probs=30.5
Q ss_pred cccccccccEEEEEEECCeeEEEEEecCC-chhhHHHHHHHHHHHHH
Q 004334 299 EPIAAASLGQVHRARLKGEEVVVKVQRPG-LKDLFDIDLKNLRVIAE 344 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l~G~~VAVKVqrPg-i~~~i~~DL~iL~~la~ 344 (760)
.++++ +--.||+...++...++|+-+|+ ....+...+..|..++.
T Consensus 32 ~~l~s-~eN~~f~~~~~~g~~iLki~~~~~~~~~i~~el~~l~~La~ 77 (331)
T COG2334 32 RGLNS-EENSNFRVQTEDGRYILKIYRPGWTRAEIPFELALLQHLAE 77 (331)
T ss_pred ccccc-ccCceEEEEecCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 56777 77889999995444499999998 44455555555555443
No 466
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.25 E-value=0.0055 Score=62.88 Aligned_cols=150 Identities=21% Similarity=0.284 Sum_probs=91.1
Q ss_pred ccccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccchHHHHHHHHHHHHHHHHH
Q 004334 298 VEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEAAN 377 (760)
Q Consensus 298 ~~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~l~~i~~E~~~~l~~EA~n 377 (760)
..|||+|+-=-||.-- +....+|||.+|+....-. ....+..++.|.. -.+...+|...
T Consensus 6 ~~~i~~G~~R~cy~HP-~dp~~cIKV~~~~~~~~~~-------~~~~~~k~~~~~~-------------~~~~~~~E~~~ 64 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHP-DDPNLCIKVMRPDRGERRR-------PFKRWLKRLRPKS-------------RYRQNRRELRY 64 (199)
T ss_pred CcccccCCCceEEECC-CCCCeEEEEEccccccccc-------cchhHHHhhcccc-------------hhHHHHHHHHH
Confidence 4689999865555322 4567899999997511100 0111122221110 11223455555
Q ss_pred HHHHHHhcCCCCceeeceeeeccCC--CeEEEEeecCC------CchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCc
Q 004334 378 AELFASNFKDMDYVKVPTIFWEYTT--PQILTMEYVPG------IKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGF 449 (760)
Q Consensus 378 l~~f~~~~~~~~~V~VP~vy~e~st--~~vLVME~ieG------~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~~Gf 449 (760)
-..+.. -.+.....+|+.|....| ..-+|+|.|.. .+|.++. ...+++. .....++.+.+.++.+++
T Consensus 65 y~~l~~-~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l--~~~~~~~--~~~~~L~~f~~~l~~~~I 139 (199)
T PF10707_consen 65 YKQLSL-RRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYL--KEGGLTE--ELRQALDEFKRYLLDHHI 139 (199)
T ss_pred HHHHhh-ccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHH--HcCCccH--HHHHHHHHHHHHHHHcCC
Confidence 555542 345567789999875544 45789998742 2444443 2233443 445567788899999999
Q ss_pred cccCCCCCcEEEeccCCC--cEEEEe
Q 004334 450 FHADPHPGNIAVDDVNGG--RLIFYD 473 (760)
Q Consensus 450 fHaDpHPGNILV~~~~~g--~l~LiD 473 (760)
+..|++|+||++....++ +++++|
T Consensus 140 v~~dl~~~NIv~~~~~~~~~~lvlID 165 (199)
T PF10707_consen 140 VIRDLNPHNIVVQRRDSGEFRLVLID 165 (199)
T ss_pred eecCCCcccEEEEecCCCceEEEEEe
Confidence 999999999999864444 599999
No 467
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.21 E-value=0.0015 Score=70.23 Aligned_cols=36 Identities=25% Similarity=0.318 Sum_probs=29.7
Q ss_pred CCccccCCCCCcEEEeccC---CCcEEEEeecceeccChh
Q 004334 447 HGFFHADPHPGNIAVDDVN---GGRLIFYDFGMMGSISPN 483 (760)
Q Consensus 447 ~GffHaDpHPGNILV~~~~---~g~l~LiDFG~v~~l~~~ 483 (760)
.++.|+|+||+||++++ + ++.+.||||..++.-++-
T Consensus 179 ~~lcH~Dl~~~Nil~~~-~~~~~~~i~lIDwEya~~~~p~ 217 (302)
T cd05156 179 VVFCHNDLQEGNILLLN-PSSETKKLVLIDFEYASYNYRG 217 (302)
T ss_pred ceEEecCCCcCeEEecC-CCCCCCcEEEEeeCCCCCCCcH
Confidence 46899999999999984 1 278999999999876553
No 468
>PRK11768 serine/threonine protein kinase; Provisional
Probab=97.06 E-value=0.0039 Score=68.47 Aligned_cols=31 Identities=29% Similarity=0.228 Sum_probs=25.8
Q ss_pred hCCccccCCCCCcEEEeccCCCcEEEEeecceecc
Q 004334 446 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 480 (760)
Q Consensus 446 ~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l 480 (760)
..|++|+|+|||||+++ + .+.++||+.++.=
T Consensus 195 ~~~liHgD~h~~NvL~~---d-~~~iIDFDd~~~g 225 (325)
T PRK11768 195 RLLRLHGDCHPGNILWR---D-GPHFVDLDDARMG 225 (325)
T ss_pred CccceecCCCchhcccc---C-CcEEEeCCCCCCC
Confidence 35789999999999994 3 4789999998843
No 469
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=96.98 E-value=0.0021 Score=62.72 Aligned_cols=96 Identities=15% Similarity=0.145 Sum_probs=65.8
Q ss_pred chhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHH
Q 004334 415 KINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAF 492 (760)
Q Consensus 415 ~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~ 492 (760)
+|.++......+++...+...+.+ ..+..+|.+| ||+||+++. ++.+++ ||++...+....
T Consensus 2 sL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~--~~~~~~--fG~~~~~~~~~~------- 64 (176)
T smart00750 2 SLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTW--DGLLKL--DGSVAFKTPEQS------- 64 (176)
T ss_pred cHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcC--ccceee--ccceEeeccccC-------
Confidence 455554332333454444333222 3366777777 999999985 777887 999987765321
Q ss_pred HHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004334 493 YGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 531 (760)
Q Consensus 493 ~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~ 531 (760)
.++..+++++++..+..++..|+++++-.+++++.
T Consensus 65 ----~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt 99 (176)
T smart00750 65 ----RVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALD 99 (176)
T ss_pred ----CCcccccChHHhcCCCCcchhhHHHHHHHHHHHHh
Confidence 35788899999887777888999999988877653
No 470
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.96 E-value=0.003 Score=69.26 Aligned_cols=35 Identities=26% Similarity=0.377 Sum_probs=30.3
Q ss_pred CCccccCCCCCcEEEeccCCCcEEEEeecceeccChh
Q 004334 447 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 483 (760)
Q Consensus 447 ~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~ 483 (760)
..++|+|.|+|||++++ ++.+.++||++++.=+|.
T Consensus 198 ~~lvHGD~~~gNlii~~--~~~~gVlDwe~~~lGDP~ 232 (321)
T COG3173 198 PVLVHGDYRPGNLIIDP--GRPTGVLDWELATLGDPL 232 (321)
T ss_pred ceeeeCCcccCCEEEeC--CCeeEEEeccccccCCcH
Confidence 46899999999999986 566999999999877764
No 471
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=96.95 E-value=0.00096 Score=77.33 Aligned_cols=127 Identities=13% Similarity=0.107 Sum_probs=87.9
Q ss_pred CCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeccC
Q 004334 388 MDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVN 465 (760)
Q Consensus 388 ~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~--~~L~qI~~~GffHaDpHPGNILV~~~~ 465 (760)
.+.+.-+....+..++.+++++|+.|+.+..-..... ..+....+...++ ..+.++|..|++|+|+||.||+++.
T Consensus 56 ~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~-~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~-- 132 (612)
T KOG0603|consen 56 TPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEV-MFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLL-- 132 (612)
T ss_pred CCceeeeeeeeccccchhHhhhhcccchhhhccccCC-chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecc--
Confidence 4555556666667788999999999987654221111 1122222222333 2367789999999999999999986
Q ss_pred CCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004334 466 GGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 466 ~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~ 529 (760)
+|.+++.|||..+..-+.... .++++++++++.. | .....|-+.+.....++
T Consensus 133 ~Ghi~~tdfglske~v~~~~~----------cgt~eymApEI~~-g-h~~a~D~ws~gvl~fel 184 (612)
T KOG0603|consen 133 EGHIKLTDFGLSKEAVKEKIA----------CGTYEYRAPEIIN-G-HLSAADWWSFGVLAFEL 184 (612)
T ss_pred cCccccCCchhhhHhHhhhhc----------ccchhhhhhHhhh-c-cCCcccchhhhhhHHHH
Confidence 899999999998877655432 6799999999998 3 34567777766544333
No 472
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.90 E-value=0.015 Score=60.86 Aligned_cols=96 Identities=22% Similarity=0.327 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHhCCChhhhhcccCccccccccccEEEEEEECCeeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCC
Q 004334 274 SETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKS 353 (760)
Q Consensus 274 ~~~v~~iie~elG~~~~~iF~~fd~~PIasaSiGQVhrA~l~G~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~ 353 (760)
|..+.+.+-+.+|.. ++ -+.+++..|.+-+.|+-.....++-||+...
T Consensus 2 w~~i~~qlse~~g~~--~i---~er~~v~gG~inea~~v~dg~~~~FvK~n~~--------------------------- 49 (286)
T COG3001 2 WQAISQQLSEQLGEG--EI---KEREEVSGGDINEAWRLRDGTDPFFVKCNQR--------------------------- 49 (286)
T ss_pred hHHHHHHHHHHhCch--hh---hcccccCCccccceeEeecCCcceEEEecch---------------------------
Confidence 567778888888865 22 1346788888877777777778999998543
Q ss_pred CccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeeccC--CCeEEEEeecCCCchh
Q 004334 354 DGAKRDWVAIYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWEYT--TPQILTMEYVPGIKIN 417 (760)
Q Consensus 354 ~~~~~~l~~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~s--t~~vLVME~ieG~~L~ 417 (760)
+....+.-||..++.|++ ...|.||+|+..-+ +..+|||||++-.+++
T Consensus 50 ------------~~~~~f~AEa~gL~~la~----s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d 99 (286)
T COG3001 50 ------------EQLSMFTAEADGLELLAR----SNTITVPKVIAVGASRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred ------------hhHHHHHHHHHHHHHHHh----cCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence 222334567778887764 34589999997555 4569999999987776
No 473
>PLN02236 choline kinase
Probab=96.86 E-value=0.013 Score=64.91 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=29.0
Q ss_pred CccccCCCCCcEEEeccCCCcEEEEeecceeccCh
Q 004334 448 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 482 (760)
Q Consensus 448 GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~ 482 (760)
.+.|+|+||+||++++ .++.+.+|||..++.-++
T Consensus 201 ~~cH~Dl~~~Nil~~~-~~~~~~lID~Eya~~~~~ 234 (344)
T PLN02236 201 GFCHNDLQYGNIMIDE-ETRAITIIDYEYASYNPV 234 (344)
T ss_pred eEEeCCCCcCcEEEeC-CCCcEEEEeehhccccch
Confidence 6899999999999974 346899999999986655
No 474
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=96.72 E-value=0.001 Score=78.84 Aligned_cols=110 Identities=18% Similarity=0.209 Sum_probs=64.3
Q ss_pred EeecCCCchhhhhhhh-hcC-CCHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhH
Q 004334 408 MEYVPGIKINRIQSLD-ELG-VDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIR 485 (760)
Q Consensus 408 ME~ieG~~L~d~~~l~-~~g-~d~~~la~~lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r 485 (760)
||||++ +|..+.... ... .+.......++ .-++.+|..|+-|+|+||.|+++.. +|.++++|||...-..-..-
T Consensus 400 mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~-~Gv~y~h~~GiahrdlK~enll~~~--~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSNGKLTPLEADCFFKQLL-RGVKYLHSMGLAHRDLKLENLLVTE--NGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred hhcccH-HHHHHHhcccccchhhhhHHHHHHH-HHHHHHHhcCceeccCccccEEEec--CCceEEeecCcceeeccCcc
Confidence 999999 887765322 111 11111222222 2247789999999999999999986 88999999998765533222
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHcCCCC-CCCChHHHH
Q 004334 486 EGLLEAFYGIYEKDADKVLQAMVQMGVLV-PTGDTTAVR 523 (760)
Q Consensus 486 ~~l~~l~~al~~~D~~~v~~~l~~lG~~~-~~~D~~al~ 523 (760)
.. .....++.-.++ +++++...-.... ...|+++..
T Consensus 476 ~~-~~~~~g~~gS~p-Y~apE~~~~~~ydpr~vDiwS~~ 512 (601)
T KOG0590|consen 476 KN-IHESSGIVGSDP-YLAPEVLTGKEYDPRAVDVWSCG 512 (601)
T ss_pred hh-hhhhcCcccCCc-CcCcccccccccCcchhhhhhcc
Confidence 21 122233333344 4445554443333 334666544
No 475
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.60 E-value=0.017 Score=63.67 Aligned_cols=34 Identities=29% Similarity=0.513 Sum_probs=29.0
Q ss_pred ccccCCCCCcEEEeccCCCcEEEEeecceeccChh
Q 004334 449 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 483 (760)
Q Consensus 449 ffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~ 483 (760)
+.|.|++|+||++.+ .++++.||||..++.-++-
T Consensus 184 ~CHnDl~~~NiL~~~-~~~~l~lID~EYag~nd~~ 217 (330)
T PLN02421 184 FAHNDLLSGNLMLNE-DEGKLYFIDFEYGSYSYRG 217 (330)
T ss_pred EEECCCCcccEEEeC-CCCcEEEEcccccCCCccH
Confidence 799999999999974 3578999999999876653
No 476
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=96.47 E-value=0.00088 Score=76.30 Aligned_cols=124 Identities=17% Similarity=0.144 Sum_probs=79.6
Q ss_pred eEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHHHHHHHHh----CCccccCCCCCcEEEeccCCCcEEEEeecceec
Q 004334 404 QILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILS----HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS 479 (760)
Q Consensus 404 ~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~~L~qI~~----~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~ 479 (760)
.++.|++|+-.+|.|+...+..+..+... ++....+|+-. .|++|+|++|.||+... +.++++.|||++..
T Consensus 331 lyI~Mn~c~~~tledWl~rr~~~e~~s~s---~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~--d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 331 LYIQMNLCEKETLEDWLRRRRTGEERSLS---LMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSD--DDQLKIGDFGLVTS 405 (516)
T ss_pred hhhhhhhhhhhhHHHHhhCCCcccccchh---HHHHHHHhhccchhhccchhhhcccccccccc--chhhhhhhhhheee
Confidence 58999999999999987544443332211 12222333322 89999999999999975 77999999999988
Q ss_pred cChhh--HHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHHH
Q 004334 480 ISPNI--REGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFE 534 (760)
Q Consensus 480 l~~~~--r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~l~~~~ 534 (760)
.+... .....+.... .+..-+|.++-+.-.......|.++++-.+.+++..|.
T Consensus 406 ~~~~~~~~~~~a~~t~~--~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~ 460 (516)
T KOG1033|consen 406 QDKDETVAPAAASHTQQ--VGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFS 460 (516)
T ss_pred cccCCcccchhhhhhhc--ccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhc
Confidence 86654 0011111111 23334444444444445667899999988887776553
No 477
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=96.46 E-value=0.002 Score=78.81 Aligned_cols=47 Identities=23% Similarity=0.269 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeeccee
Q 004334 429 RKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMG 478 (760)
Q Consensus 429 ~~~la~~lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~ 478 (760)
.+.++=.++ ..+.|+|..|+.|||+|.+||||+. -+-+.|.||..-+
T Consensus 122 KkWiaFQLL-~al~qcH~~gVcHGDIKsENILiTS--WNW~~LtDFAsFK 168 (1431)
T KOG1240|consen 122 KKWIAFQLL-KALSQCHKLGVCHGDIKSENILITS--WNWLYLTDFASFK 168 (1431)
T ss_pred HHHHHHHHH-HHHHHHHHcCccccccccceEEEee--echhhhhcccccC
Confidence 344544444 3489999999999999999999985 5678888887643
No 478
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=96.10 E-value=0.0091 Score=66.24 Aligned_cols=124 Identities=15% Similarity=0.089 Sum_probs=65.9
Q ss_pred eEEEEeecCCCchhhhhhhhhcCCC-HHHHHHHHHHHHHHHHHhCCccccCCCCCcEEEeccCCC--cEEEEeecceecc
Q 004334 404 QILTMEYVPGIKINRIQSLDELGVD-RKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGG--RLIFYDFGMMGSI 480 (760)
Q Consensus 404 ~vLVME~ieG~~L~d~~~l~~~g~d-~~~la~~lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g--~l~LiDFG~v~~l 480 (760)
.+|||-..+ .+|.++........- ..-+...+++. ...+|.||+-|+|+|.+|||+.-++|+ .+++.|||++---
T Consensus 318 lylvMkrY~-~tLr~yl~~~~~s~r~~~~~laQlLEa-v~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd 395 (598)
T KOG4158|consen 318 LYLVMKRYR-QTLREYLWTRHRSYRTGRVILAQLLEA-VTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLAD 395 (598)
T ss_pred EEEehhcch-hhHHHHHhcCCCchHHHHHHHHHHHHH-HHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeec
Confidence 488887654 244444322221111 11122222222 466899999999999999999643344 6999999988532
Q ss_pred Chh-hHHHHHHHHHHHhhcCHHHHHHHHHHcC------CCCCCCChHHHHHHHHHHH
Q 004334 481 SPN-IREGLLEAFYGIYEKDADKVLQAMVQMG------VLVPTGDTTAVRRTAQFFL 530 (760)
Q Consensus 481 ~~~-~r~~l~~l~~al~~~D~~~v~~~l~~lG------~~~~~~D~~al~~~~~~~l 530 (760)
+.. .+-.|..--. -.-++...|++++...- +--...|.++.....++++
T Consensus 396 ~~hGlqlpy~S~~V-d~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIf 451 (598)
T KOG4158|consen 396 DNHGLQLPYESDEV-DLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIF 451 (598)
T ss_pred cccccccccccccc-cCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHh
Confidence 221 1111100000 01245566677665431 0012457777777666654
No 479
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=96.01 E-value=0.0054 Score=74.93 Aligned_cols=93 Identities=20% Similarity=0.195 Sum_probs=66.5
Q ss_pred HHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecceecc----ChhhHHHHHHHHH-----HHhhcCHHHHHHHHHH
Q 004334 439 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI----SPNIREGLLEAFY-----GIYEKDADKVLQAMVQ 509 (760)
Q Consensus 439 ~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l----~~~~r~~l~~l~~-----al~~~D~~~v~~~l~~ 509 (760)
..++++|..|++|+|++|.|++|+. -|.+++.|||+.... .....+.+++-+. --+.+.+++++++++.
T Consensus 154 la~Eylh~ygivhrdlkpdnllIT~--mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVil 231 (1205)
T KOG0606|consen 154 LAVEYLHSYGIVHRDLKPDNLLITS--MGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVIL 231 (1205)
T ss_pred HHhHhhccCCeecCCCCCCcceeee--cccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhh
Confidence 3478899999999999999999986 799999999987542 2222222222111 1124678888888887
Q ss_pred cCCCCCCCChHHHHHHHHHHHHHH
Q 004334 510 MGVLVPTGDTTAVRRTAQFFLNSF 533 (760)
Q Consensus 510 lG~~~~~~D~~al~~~~~~~l~~~ 533 (760)
+--....+|-+++.-+.++|+-..
T Consensus 232 rqgygkpvdwwamGiIlyeFLVgc 255 (1205)
T KOG0606|consen 232 RQGYGKPVDWWAMGIILYEFLVGC 255 (1205)
T ss_pred hhccCCCccHHHHHHHHHHHheee
Confidence 755577889999998888776543
No 480
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=95.84 E-value=0.016 Score=61.67 Aligned_cols=29 Identities=31% Similarity=0.349 Sum_probs=26.0
Q ss_pred cccccccccEEEEEEE-CCeeEEEEEecCC
Q 004334 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPG 327 (760)
Q Consensus 299 ~PIasaSiGQVhrA~l-~G~~VAVKVqrPg 327 (760)
.++..|+.+.|+.++. +|+++++|+..|+
T Consensus 8 ~~~~~g~~s~V~pv~~~dG~~avLKl~~p~ 37 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRADGTPAVLKLAPPH 37 (253)
T ss_pred CCCCCCcceEEEEEEcCCCCeEEEEecCCc
Confidence 4678899999999998 8999999999885
No 481
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.26 E-value=0.17 Score=55.62 Aligned_cols=193 Identities=19% Similarity=0.209 Sum_probs=106.6
Q ss_pred hhcccCccccccccccEEEEEEE----CC--------eeEEEEEecCCchhhHHHHHHHHHHHHHHHhhhCCCCCccccc
Q 004334 292 VFERFDVEPIAAASLGQVHRARL----KG--------EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRD 359 (760)
Q Consensus 292 iF~~fd~~PIasaSiGQVhrA~l----~G--------~~VAVKVqrPgi~~~i~~DL~iL~~la~~l~~~~p~~~~~~~~ 359 (760)
+|+.++. .|+.|.-+.|..|.- +| +.+||||-+.-+.+--.+|-.|-- =.++-.++ .+.+
T Consensus 252 vle~i~G-iIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~YiKD-DfRFKDRF------SK~N 323 (531)
T KOG2269|consen 252 VLESIDG-IISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEYIKD-DFRFKDRF------SKQN 323 (531)
T ss_pred hHHhhhh-hhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhhhcc-chhhhhhh------cccC
Confidence 3444432 577788788877733 12 457888765433322222211100 00011111 1223
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeceeeeccCCCeEEEEeecCCCchhhhhhhhh--cCCCHHHHHHHHH
Q 004334 360 WVAIYDECASVLYQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE--LGVDRKRLGRYAV 437 (760)
Q Consensus 360 l~~i~~E~~~~l~~EA~nl~~f~~~~~~~~~V~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~--~g~d~~~la~~lv 437 (760)
...|..-.+ .+|..|+.++.+. ++.+|.|+ .-.+.||||.||.-..+.- ..+.. ..-+....+...+
T Consensus 324 pR~i~~mWA---EkEmhNL~RMq~~-----GlpcP~vV--~lkkhvLVMsFiGd~~~aA-PkLK~v~l~d~E~~~aY~q~ 392 (531)
T KOG2269|consen 324 PRGILKMWA---EKEMHNLSRMQKH-----GLPCPQVV--KLKKHVLVMSFIGDQGLAA-PKLKNVELTDDERRNAYDQV 392 (531)
T ss_pred cHHHHHHHH---HHHHHHHHHHHhc-----CCCCCcee--eeecceEEEEeecCCCCCC-ccccccccChHHHHHHHHHH
Confidence 334433332 3688999998753 46677766 3467899999985322211 00111 1112223333334
Q ss_pred HHHHHH-HHhCCccccCCCCCcEEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC
Q 004334 438 ESYLEQ-ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL 513 (760)
Q Consensus 438 ~~~L~q-I~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~ 513 (760)
...+.+ .++.-++|+|+.--|+|.. .|++.+||-..+...+.. ..+ -++.+|...+...+.+.|..
T Consensus 393 ~~~M~~lY~Ec~LVHADlSEyN~Lw~---~gKvw~IDVsQsvep~HP--~~L-----eFL~RDc~Ni~~FF~r~G~p 459 (531)
T KOG2269|consen 393 QSIMCRLYKECLLVHADLSEYNLLWT---PGKVWVIDVSQSVEPSHP--RSL-----EFLTRDCQNIITFFTRIGTP 459 (531)
T ss_pred HHHHHHHHHhhheeecchhhhhheec---CCceEEEechhccCCCCc--chh-----HHHHHHHHHHHHHHHhcCCC
Confidence 444444 4578899999999999997 479999997766555433 222 12346777788888887763
No 482
>PRK10271 thiK thiamine kinase; Provisional
Probab=95.10 E-value=0.016 Score=58.87 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=28.2
Q ss_pred CccccCCCCCcEEEeccCCCcEEEEeecceeccChh
Q 004334 448 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 483 (760)
Q Consensus 448 GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~~ 483 (760)
-..|+|+||+||++++ +| +++|||+.++.-++.
T Consensus 78 ~p~H~D~~~~N~~~~~--~~-~~lIDwe~a~~gDp~ 110 (188)
T PRK10271 78 APLHMDVHAGNLVHSA--SG-LRLIDWEYAGDGDIA 110 (188)
T ss_pred eeecCCCCCccEEEEC--CC-EEEEeCCcccCCCHH
Confidence 4699999999999974 44 999999999987774
No 483
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=94.82 E-value=0.36 Score=49.90 Aligned_cols=25 Identities=24% Similarity=0.373 Sum_probs=23.5
Q ss_pred cccccccc-cEEEEEEECCeeEEEEE
Q 004334 299 EPIAAASL-GQVHRARLKGEEVVVKV 323 (760)
Q Consensus 299 ~PIasaSi-GQVhrA~l~G~~VAVKV 323 (760)
+-+|.|+- |.|++++.+|+.+|+|+
T Consensus 43 efLg~g~~~~~V~kv~I~g~~YALKl 68 (207)
T PF13095_consen 43 EFLGHGSHDGYVFKVEIDGRIYALKL 68 (207)
T ss_pred eecCCCCceeEEEEEEECCeEEEEEE
Confidence 46899999 99999999999999999
No 484
>PTZ00384 choline kinase; Provisional
Probab=94.65 E-value=0.33 Score=54.86 Aligned_cols=32 Identities=28% Similarity=0.217 Sum_probs=26.2
Q ss_pred CCccccCCCCCcEEEeccCCCcEEEEeecceeccC
Q 004334 447 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS 481 (760)
Q Consensus 447 ~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~ 481 (760)
..+.|-|+++|||+.. ++.+.+|||=-++.=+
T Consensus 227 ~VfCHNDL~~gNIL~~---~~~l~lID~EYA~~n~ 258 (383)
T PTZ00384 227 VLFCHNDLFFTNILDF---NQGIYFIDFDFAGFNY 258 (383)
T ss_pred eeeeeccCCcccEEec---CCCEEEEEeccccCCc
Confidence 4789999999999975 5679999998776433
No 485
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=94.11 E-value=0.074 Score=59.17 Aligned_cols=132 Identities=13% Similarity=0.050 Sum_probs=79.4
Q ss_pred eeceeeeccCCCeEEEEeecCCCchhhhhhhhhc-------CCCHHHHH--HHHHHHHHHHHHhCCccccCCCCCcEEEe
Q 004334 392 KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL-------GVDRKRLG--RYAVESYLEQILSHGFFHADPHPGNIAVD 462 (760)
Q Consensus 392 ~VP~vy~e~st~~vLVME~ieG~~L~d~~~l~~~-------g~d~~~la--~~lv~~~L~qI~~~GffHaDpHPGNILV~ 462 (760)
.|-.|--+.........-+..=+.|..+....+. .+...++. ...+...+..+|.+|++|.|+-..|-.|+
T Consensus 351 ~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvId 430 (563)
T KOG1024|consen 351 SVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVID 430 (563)
T ss_pred ceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceeh
Confidence 3444433333334444555554556655443221 11122222 22344567889999999999999999998
Q ss_pred ccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004334 463 DVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 529 (760)
Q Consensus 463 ~~~~g~l~LiDFG~v~~l~~~~r~~l~~l~~al~~~D~~~v~~~l~~lG~~~~~~D~~al~~~~~~~ 529 (760)
+ .-+++|.|=.+.+.+=|.+-+.+.+- -++-...|..+.+.....+...|+++|+..+-++
T Consensus 431 d--~LqVkltDsaLSRDLFP~DYhcLGDn----EnRPvkWMslEal~n~~yssasDvWsfGVllWEL 491 (563)
T KOG1024|consen 431 D--QLQVKLTDSALSRDLFPGDYHCLGDN----ENRPVKWMSLEALQNSHYSSASDVWSFGVLLWEL 491 (563)
T ss_pred h--heeEEeccchhccccCcccccccCCC----CCCcccccCHHHHhhhhhcchhhhHHHHHHHHHH
Confidence 6 67999999998887765543322110 0222345555555555667788999998765444
No 486
>PTZ00296 choline kinase; Provisional
Probab=93.31 E-value=1.3 Score=50.94 Aligned_cols=32 Identities=28% Similarity=0.241 Sum_probs=26.3
Q ss_pred CccccCCCCCcEEEeccCCCcEEEEeecceeccCh
Q 004334 448 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 482 (760)
Q Consensus 448 GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~ 482 (760)
.+.|.|+.++||+.. ++.+.||||=.++.-++
T Consensus 285 VfCHNDl~~~NiL~~---~~~l~LIDfEYAg~ndp 316 (442)
T PTZ00296 285 VFCHNDLQENNIINT---NKCLRLIDFEYSGYNFL 316 (442)
T ss_pred eEEeCCCCccceeec---CCCEEEEeecccccccH
Confidence 589999999999875 45599999988876544
No 487
>COG4857 Predicted kinase [General function prediction only]
Probab=93.03 E-value=0.37 Score=51.87 Aligned_cols=49 Identities=20% Similarity=0.421 Sum_probs=36.0
Q ss_pred hCCccccCCCCCcEEEeccCCCcEEEEe--ecceeccChhhHHHHHHHHHHHhh
Q 004334 446 SHGFFHADPHPGNIAVDDVNGGRLIFYD--FGMMGSISPNIREGLLEAFYGIYE 497 (760)
Q Consensus 446 ~~GffHaDpHPGNILV~~~~~g~l~LiD--FG~v~~l~~~~r~~l~~l~~al~~ 497 (760)
..-++|+|+|.|.|++++ ...++|| |...|.+.-+.=.-+.+++..+..
T Consensus 227 aetLiHGDLHsGSIfvte---~etkvIDPEFaFYGPmafDiG~~iaNl~~~~~s 277 (408)
T COG4857 227 AETLIHGDLHSGSIFVTE---KETKVIDPEFAFYGPMAFDIGMLIANLWMSLFS 277 (408)
T ss_pred hHHHhccccccCcEEeec---CcceeeCccccccCcchhhHHHHHHHHHHHHHh
Confidence 345899999999999984 4567777 777787776666666667665543
No 488
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=92.30 E-value=0.34 Score=49.19 Aligned_cols=86 Identities=22% Similarity=0.296 Sum_probs=54.5
Q ss_pred eeceeeeccCCCeEEEEeecCCCchhhh----hhh-hhcCCCHHHHHHHHHHHHHHHHHh---CCccccCCCCCcEEEec
Q 004334 392 KVPTIFWEYTTPQILTMEYVPGIKINRI----QSL-DELGVDRKRLGRYAVESYLEQILS---HGFFHADPHPGNIAVDD 463 (760)
Q Consensus 392 ~VP~vy~e~st~~vLVME~ieG~~L~d~----~~l-~~~g~d~~~la~~lv~~~L~qI~~---~GffHaDpHPGNILV~~ 463 (760)
++|+++. .|+ +++++||+..+++... ... ...-..+..+|..+++. ++.+.. ..|+-+|.+|+|+-|++
T Consensus 21 ~~pk~lG-~CG-~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~-l~~l~~~~~~~~~lcDv~~~nfgv~~ 97 (188)
T PF12260_consen 21 PFPKLLG-SCG-RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLEL-LEELDHGPLGFFYLCDVSPDNFGVND 97 (188)
T ss_pred CCCCeee-ECC-CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHH-HHHHhcCCCCcEEEeecchHHeEEeC
Confidence 7899883 444 5779999997655321 111 11111234444444443 233332 34788999999999985
Q ss_pred cCCCcEEEEeecceeccCh
Q 004334 464 VNGGRLIFYDFGMMGSISP 482 (760)
Q Consensus 464 ~~~g~l~LiDFG~v~~l~~ 482 (760)
+|+++++|...+...+.
T Consensus 98 --~~~lk~iDld~v~~~~~ 114 (188)
T PF12260_consen 98 --DGRLKLIDLDDVFVEDK 114 (188)
T ss_pred --CCcEEEEechhcchhHH
Confidence 88999999998876644
No 489
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=92.11 E-value=0.1 Score=56.16 Aligned_cols=31 Identities=29% Similarity=0.392 Sum_probs=26.3
Q ss_pred hCCccccCCCCCcEEEeccCCCcEEEEeecceec
Q 004334 446 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS 479 (760)
Q Consensus 446 ~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~ 479 (760)
..|++|+|+|++||++++ +.+.++||+.+..
T Consensus 186 ~~~liHgD~~~~Nil~~~---~~i~lIDfd~~~~ 216 (313)
T TIGR02906 186 IRGFCHQDYAYHNILLKD---NEVYVIDFDYCTI 216 (313)
T ss_pred cCceEcCCCCcccEEEeC---CcEEEEECccccc
Confidence 368999999999999973 5789999997654
No 490
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=91.80 E-value=0.56 Score=52.44 Aligned_cols=29 Identities=28% Similarity=0.440 Sum_probs=26.6
Q ss_pred CCccccCCCCCcEEEeccCCCcEEEEeeccee
Q 004334 447 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMG 478 (760)
Q Consensus 447 ~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~ 478 (760)
..|=|+|+|-+||+++ +|+|.||||-+++
T Consensus 341 f~fehrnlt~~niLId---~GnvtLIDfklsR 369 (488)
T COG5072 341 FPFEHRNLTLDNILID---EGNVTLIDFKLSR 369 (488)
T ss_pred CCcccccccccceeee---cCceEEEEeeeee
Confidence 4588999999999997 6999999999987
No 491
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=91.42 E-value=0.15 Score=51.90 Aligned_cols=38 Identities=24% Similarity=0.253 Sum_probs=30.5
Q ss_pred hCCccccCCCCCcEEEeccCCC---cEEEEeecceeccChh
Q 004334 446 SHGFFHADPHPGNIAVDDVNGG---RLIFYDFGMMGSISPN 483 (760)
Q Consensus 446 ~~GffHaDpHPGNILV~~~~~g---~l~LiDFG~v~~l~~~ 483 (760)
...+.|+|+|++||++...++| .+.++||..++.-++.
T Consensus 119 ~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~ 159 (196)
T smart00587 119 FNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPA 159 (196)
T ss_pred ceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChH
Confidence 3568999999999999752233 6999999999887764
No 492
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=91.18 E-value=4.6 Score=46.18 Aligned_cols=34 Identities=26% Similarity=0.361 Sum_probs=25.6
Q ss_pred ccccCCCCCcEEEeccCCCc---EEEEeecceeccCh
Q 004334 449 FFHADPHPGNIAVDDVNGGR---LIFYDFGMMGSISP 482 (760)
Q Consensus 449 ffHaDpHPGNILV~~~~~g~---l~LiDFG~v~~l~~ 482 (760)
++|+|+...|||++..++|+ -.||||=++..-++
T Consensus 270 L~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~~ 306 (414)
T PF07914_consen 270 LVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGSP 306 (414)
T ss_pred eecCCccHHheeeecCCchhHHHHHHHHHHHhhcCch
Confidence 69999999999998644543 45788877665554
No 493
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=90.33 E-value=0.45 Score=50.94 Aligned_cols=36 Identities=25% Similarity=0.337 Sum_probs=29.6
Q ss_pred CccccCCCCCcEEEeccCCC---cEEEEeecceeccChh
Q 004334 448 GFFHADPHPGNIAVDDVNGG---RLIFYDFGMMGSISPN 483 (760)
Q Consensus 448 GffHaDpHPGNILV~~~~~g---~l~LiDFG~v~~l~~~ 483 (760)
-+.|||+|++|||+...++| .++++||-+++.-++-
T Consensus 216 vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~g~p~ 254 (294)
T PF02958_consen 216 VLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARYGSPA 254 (294)
T ss_pred EEEcCccCHHhEeEccccccccccceeeccccccCCCcH
Confidence 37999999999999763344 7999999999877663
No 494
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=89.67 E-value=0.16 Score=51.77 Aligned_cols=35 Identities=31% Similarity=0.562 Sum_probs=22.9
Q ss_pred CCccccCCCCCcEEEeccCCCcEEEEeecceeccCh
Q 004334 447 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 482 (760)
Q Consensus 447 ~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~ 482 (760)
..+.|.|++|+||++.. .++++.||||-.++.=++
T Consensus 143 ~v~cHnDl~~~Nil~~~-~~~~~~lIDfEya~~n~~ 177 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINN-KDGEVKLIDFEYAGYNDR 177 (211)
T ss_dssp EEEE-S--SGGGEEETS-SSSCEEE--GTT-EEEEH
T ss_pred ceEeeccCccccEEecc-CCCeEEEecHHHHhhccc
Confidence 45899999999999932 378999999998886543
No 495
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=88.54 E-value=0.3 Score=52.47 Aligned_cols=33 Identities=33% Similarity=0.553 Sum_probs=28.2
Q ss_pred CccccCCCCCcEEEeccCCCcEEEEeecceeccCh
Q 004334 448 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 482 (760)
Q Consensus 448 GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l~~ 482 (760)
-+.|+|++|+|++.++ .|++.||||=-++.=++
T Consensus 154 v~cH~Dl~~~N~l~t~--~~~l~LIDWEyAg~~D~ 186 (269)
T COG0510 154 VPCHNDLNPGNLLLTD--KGGLFLIDWEYAGLNDP 186 (269)
T ss_pred eeecCCCCccceEEcC--CCcEEEEecccCCCccH
Confidence 5899999999999984 69999999987775544
No 496
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=85.00 E-value=0.88 Score=53.09 Aligned_cols=121 Identities=17% Similarity=0.136 Sum_probs=73.6
Q ss_pred eeccCCCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHH---HHH----HHHHHHhCCccccCCCCCcEEEeccCC-Cc
Q 004334 397 FWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA---VES----YLEQILSHGFFHADPHPGNIAVDDVNG-GR 468 (760)
Q Consensus 397 y~e~st~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~l---v~~----~L~qI~~~GffHaDpHPGNILV~~~~~-g~ 468 (760)
.|+-++..++-+|.+. ..+..+......-. +....... ... .+..+|..+++|-|++|.||+... + ..
T Consensus 186 ~~e~~~~lfiqtE~~~-~sl~~~~~~~~~~~-p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~--~~~s 261 (524)
T KOG0601|consen 186 AWEGSGILFIQTELCG-ESLQSYCHTPCNFL-PDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTS--DWTS 261 (524)
T ss_pred ccccCCcceeeecccc-chhHHhhhcccccC-CchhhhhHHhhhhhcccccccccCCCcccccccchhheeccc--ccce
Confidence 4566777888888886 33443322111101 11111111 112 467789999999999999999975 5 67
Q ss_pred EEEEeecceeccChhhHHHHHHHHHHHh-hcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004334 469 LIFYDFGMMGSISPNIREGLLEAFYGIY-EKDADKVLQAMVQMGVLVPTGDTTAVRR 524 (760)
Q Consensus 469 l~LiDFG~v~~l~~~~r~~l~~l~~al~-~~D~~~v~~~l~~lG~~~~~~D~~al~~ 524 (760)
..+.|||.+..+.+..-....... .- .+|.-++++.+.+. ......|+.++..
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~--~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~e 315 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVS--KRPEGDCIYAAKELLNG-LATFASDIFSLGE 315 (524)
T ss_pred eecCCcceeEEccCCccccceeee--ecCCCCceEeChhhhcc-ccchHhhhcchhh
Confidence 899999999999876532222111 11 46677777777653 3344556665554
No 497
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=84.27 E-value=0.54 Score=51.09 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=28.1
Q ss_pred hCCccccCCCCCcEEEeccCCCcEEEEeecceecc
Q 004334 446 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 480 (760)
Q Consensus 446 ~~GffHaDpHPGNILV~~~~~g~l~LiDFG~v~~l 480 (760)
..|++|+|++++|+++++ ++.+.++||-.+..=
T Consensus 195 ~~~lcHgD~~~~Nvl~~~--~~~~~iIDfd~~~~d 227 (309)
T TIGR02904 195 RTVLVHGKLSLSHFLYDE--TRGGYFINFEKASFA 227 (309)
T ss_pred ceeeeCCCCcHHhEEEcC--CCCEEEEEhhhcccC
Confidence 348999999999999975 778999999988643
No 498
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=78.07 E-value=5.5 Score=46.39 Aligned_cols=120 Identities=16% Similarity=0.104 Sum_probs=75.9
Q ss_pred CCeEEEEeecCCCchhhhhhhhhcCCCHHHHHHHHHHH--HHHHHHhCC-ccccCCCCCcEEEeccCCCcEEEEeeccee
Q 004334 402 TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQILSHG-FFHADPHPGNIAVDDVNGGRLIFYDFGMMG 478 (760)
Q Consensus 402 t~~vLVME~ieG~~L~d~~~l~~~g~d~~~la~~lv~~--~L~qI~~~G-ffHaDpHPGNILV~~~~~g~l~LiDFG~v~ 478 (760)
...+.+-+||.-++|.|+......+.|..-....+-+. -+..+|.-- .+|+-+++.|-+++. .-.+++.|||+-.
T Consensus 20 ~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~--~w~lklt~~Gl~~ 97 (484)
T KOG1023|consen 20 PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDS--RWVLKLTDFGLNS 97 (484)
T ss_pred CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeee--eEEEEechhhhcc
Confidence 45678899999999999876655555543322222111 356666443 399999999999985 6789999999998
Q ss_pred ccCh-----hhHHHHHHHHHHHhhcCHHHHHHHHHHcC-------CCCCCCChHHHHHHHHHHHHH
Q 004334 479 SISP-----NIREGLLEAFYGIYEKDADKVLQAMVQMG-------VLVPTGDTTAVRRTAQFFLNS 532 (760)
Q Consensus 479 ~l~~-----~~r~~l~~l~~al~~~D~~~v~~~l~~lG-------~~~~~~D~~al~~~~~~~l~~ 532 (760)
...+ .......++ . ..+++++... ..+..+|++++.-.+++++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~----l-----w~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r 154 (484)
T KOG1023|consen 98 LLEETAEPEAHHPIRKAL----L-----WTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFR 154 (484)
T ss_pred cccccccccccchhHHHH----h-----ccCHHHhcccccccccccccccCCeehHHHHHHHHHhc
Confidence 7742 111111111 1 1223333221 135668999999888777654
No 499
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=76.80 E-value=1.4 Score=51.38 Aligned_cols=82 Identities=22% Similarity=0.281 Sum_probs=53.3
Q ss_pred eccCCCeEEEEeecCCCchhhhhhhhh-cCCCHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEEeccCCCcEEEEeecc
Q 004334 398 WEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGM 476 (760)
Q Consensus 398 ~e~st~~vLVME~ieG~~L~d~~~l~~-~g~d~~~la~~lv~~~L~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG~ 476 (760)
|..-...++.-|||+|.+...-..... ...++......-+-..+.-||...++|.|++|.||++.. +++-..+.|||.
T Consensus 335 W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~-~~~~~~~~~~~~ 413 (524)
T KOG0601|consen 335 WSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISN-DGFFSKLGDFGC 413 (524)
T ss_pred ccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeecc-chhhhhcccccc
Confidence 444455679999999988765332111 112222222222223356688999999999999999985 236778889998
Q ss_pred eecc
Q 004334 477 MGSI 480 (760)
Q Consensus 477 v~~l 480 (760)
...+
T Consensus 414 ~t~~ 417 (524)
T KOG0601|consen 414 WTRL 417 (524)
T ss_pred cccc
Confidence 8764
No 500
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=76.77 E-value=0.89 Score=54.37 Aligned_cols=121 Identities=21% Similarity=0.253 Sum_probs=73.4
Q ss_pred ccCCCeEEEEeecCCCchhhhh-hhhhcCCCHHHHHHH--HHHHHHHHHH-hCCccccCCCCCcEEEeccCCC-cEEEEe
Q 004334 399 EYTTPQILTMEYVPGIKINRIQ-SLDELGVDRKRLGRY--AVESYLEQIL-SHGFFHADPHPGNIAVDDVNGG-RLIFYD 473 (760)
Q Consensus 399 e~st~~vLVME~ieG~~L~d~~-~l~~~g~d~~~la~~--lv~~~L~qI~-~~GffHaDpHPGNILV~~~~~g-~l~LiD 473 (760)
......++.+||.+|..+.+.. ..+..+.+....... -...-+..+| ..|+.|+|++|.|.+++. .+ .++..|
T Consensus 91 ~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~--s~~~l~~~d 168 (601)
T KOG0590|consen 91 SSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDE--SGSALKIAD 168 (601)
T ss_pred CCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhcc--CCCcccCCC
Confidence 3455679999999999888755 222212221111111 1112244567 779999999999999986 56 899999
Q ss_pred ecceeccCh-hhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHH
Q 004334 474 FGMMGSISP-NIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRR 524 (760)
Q Consensus 474 FG~v~~l~~-~~r~~l~~l~~al~~~D~~~v~~~l~~l-G~~~~~~D~~al~~ 524 (760)
||++..+.. +........-.+ .++.+++++...- +...+..|.+....
T Consensus 169 f~~At~~~~~~g~~~~~~~~~g---~s~~y~a~E~~~~~~~~~~~~d~~S~g~ 218 (601)
T KOG0590|consen 169 FGLATAYRNKNGAERSLKDRCG---SSPPYGAPEHLSGKAYRGPSVDVWSLGI 218 (601)
T ss_pred chhhccccccCCcceeeecccC---CCCCCCCcccccchhhcCCCcccccccc
Confidence 999988876 333222222111 2666666665433 44455666665443
Done!