BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004345
(760 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 143/309 (46%), Gaps = 59/309 (19%)
Query: 466 YANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVK 525
+ + E+ L L F+ EL A++NF N LG+GGFG VYKG+L DG +AVK
Sbjct: 9 FFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVK 68
Query: 526 RLSKASGQGQE-EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD 584
RL + QG E +F EV +IS HRNL+RL G C+ E +L+Y YM N S+ S L +
Sbjct: 69 RLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 128
Query: 585 -----------------FGLARIFGGNQDQAATK------------------RLVGTY-- 607
G AR D K +VG +
Sbjct: 129 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 188
Query: 608 -------------------GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRK--NTSFY 646
G+++PEY G+ SEK+DVF +GV+LLE+++G++ + +
Sbjct: 189 AKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 248
Query: 647 HEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMP 706
+ ++ LL + L + + LVD + + E+ + + V LLC Q +RP M
Sbjct: 249 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 308
Query: 707 TVVSMLNSE 715
VV ML +
Sbjct: 309 EVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 143/309 (46%), Gaps = 59/309 (19%)
Query: 466 YANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVK 525
+ + E+ L L F+ EL A++NF N LG+GGFG VYKG+L DG +AVK
Sbjct: 1 FFDVPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVK 60
Query: 526 RLSKASGQGQE-EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD 584
RL + QG E +F EV +IS HRNL+RL G C+ E +L+Y YM N S+ S L +
Sbjct: 61 RLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 120
Query: 585 -----------------FGLARIFGGNQDQAATK------------------RLVGTYG- 608
G AR D K +VG +G
Sbjct: 121 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 180
Query: 609 --------------------YMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRK--NTSFY 646
+++PEY G+ SEK+DVF +GV+LLE+++G++ + +
Sbjct: 181 AKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 240
Query: 647 HEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMP 706
+ ++ LL + L + + LVD + + E+ + + V LLC Q +RP M
Sbjct: 241 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 300
Query: 707 TVVSMLNSE 715
VV ML +
Sbjct: 301 EVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 131/276 (47%), Gaps = 56/276 (20%)
Query: 489 ELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNL 548
+L ATNNF +G G FG VYKG L+DG ++A+KR + S QG EEF E+ +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPN--------------------------------- 575
+H +LV L+G C ER E +LIY+YM N
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 576 -------------KSLDSFL--------FDFGLARIFGGNQDQAATKRLV-GTYGYMSPE 613
KS++ L DFG+++ G DQ +V GT GY+ PE
Sbjct: 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK-GTELDQTHLXXVVKGTLGYIDPE 211
Query: 614 YAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDP 673
Y ++GR +EKSDV+SFGV+L E++ R + L +A + N+ + +VDP
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDP 271
Query: 674 LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVV 709
+++ + + + + C+ +DRP+M V+
Sbjct: 272 NLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 54/275 (19%)
Query: 489 ELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNL 548
+L ATNNF +G G FG VYKG L+DG ++A+KR + S QG EEF E+ +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-----------------FGLARIF 591
+H +LV L+G C ER E +LIY+YM N +L L+ G AR
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 592 GGNQDQAATKRLV-------------------------------------GTYGYMSPEY 614
+A R V GT GY+ PEY
Sbjct: 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEY 212
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPL 674
++GR +EKSDV+SFGV+L E++ R + L +A + N+ + +VDP
Sbjct: 213 FIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPN 272
Query: 675 ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVV 709
+++ + + + + C+ +DRP+M V+
Sbjct: 273 LADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 129/291 (44%), Gaps = 67/291 (23%)
Query: 485 FNFEELANATNNFQL------ANKLGQGGFGPVYKGKLQDGQEIAVKRLSK----ASGQG 534
F+F EL N TNNF NK+G+GGFG VYKG + + +AVK+L+ + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 535 QEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP-------------------- 574
+++F E+ V++ QH NLV LLG + ++ L+Y YMP
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 575 ---------------------------------NKSLDSFLFDFGLARIFGGNQDQAATK 601
+++ + + DFGLAR
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS 193
Query: 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKL 661
R+VGT YM+PE A+ G + KSD++SFGV+LLEI++G H E +L L
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD-EHREPQLLLDIKEEIE 251
Query: 662 WNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSML 712
+ + D +D ++++ + +V C+ E RP++ V +L
Sbjct: 252 DEEKTIEDYIDKKMNDAD-STSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 129/291 (44%), Gaps = 67/291 (23%)
Query: 485 FNFEELANATNNFQL------ANKLGQGGFGPVYKGKLQDGQEIAVKRLSK----ASGQG 534
F+F EL N TNNF NK+G+GGFG VYKG + + +AVK+L+ + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 535 QEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP-------------------- 574
+++F E+ V++ QH NLV LLG + ++ L+Y YMP
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 575 ---------------------------------NKSLDSFLFDFGLARIFGGNQDQAATK 601
+++ + + DFGLAR
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX 193
Query: 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKL 661
R+VGT YM+PE A+ G + KSD++SFGV+LLEI++G H E +L L
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD-EHREPQLLLDIKEEIE 251
Query: 662 WNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSML 712
+ + D +D ++++ + +V C+ E RP++ V +L
Sbjct: 252 DEEKTIEDYIDKKMNDAD-STSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 129/291 (44%), Gaps = 67/291 (23%)
Query: 485 FNFEELANATNNFQL------ANKLGQGGFGPVYKGKLQDGQEIAVKRLSK----ASGQG 534
F+F EL N TNNF NK+G+GGFG VYKG + + +AVK+L+ + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 535 QEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP-------------------- 574
+++F E+ V++ QH NLV LLG + ++ L+Y YMP
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 575 ---------------------------------NKSLDSFLFDFGLARIFGGNQDQAATK 601
+++ + + DFGLAR
Sbjct: 128 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXX 187
Query: 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKL 661
R+VGT YM+PE A+ G + KSD++SFGV+LLEI++G H E +L L
Sbjct: 188 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD-EHREPQLLLDIKEEIE 245
Query: 662 WNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSML 712
+ + D +D ++++ + +V C+ E RP++ V +L
Sbjct: 246 DEEKTIEDYIDKKMNDAD-STSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 124/291 (42%), Gaps = 67/291 (23%)
Query: 485 FNFEELANATNNFQL------ANKLGQGGFGPVYKGKLQDGQEIAVKRLSK----ASGQG 534
F+F EL N TNNF NK G+GGFG VYKG + + +AVK+L+ + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 535 QEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP-------------------- 574
+++F E+ V + QH NLV LLG + ++ L+Y Y P
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 575 ---------------------------------NKSLDSFLFDFGLARIFGGNQDQAATK 601
+++ + + DFGLAR
Sbjct: 125 XRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXS 184
Query: 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKL 661
R+VGT Y +PE A+ G + KSD++SFGV+LLEI++G H E +L L
Sbjct: 185 RIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD-EHREPQLLLDIKEEIE 242
Query: 662 WNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSML 712
+ + D +D +++ + +V C+ E RP++ V +L
Sbjct: 243 DEEKTIEDYIDKKXNDAD-STSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 133/330 (40%), Gaps = 87/330 (26%)
Query: 455 SKVQRLDLGEAYANFSTEK--VNPARLQD--LLVFNFEELANATNNFQLANKLGQGGFGP 510
S +RL G + + V+P +D V F + +ATN + +G G FG
Sbjct: 2 SDEKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGE 60
Query: 511 VYKGKLQDGQE----IAVKRLSKASGQGQE-EFMNEVMVISNLQHRNLVRLLGCCVEREE 565
V G+L+ + +A+K L + Q +F+ E ++ H N++RL G + +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 566 NMLIYEYMPNKSLDSFL------------------------------------------- 582
M++ EYM N SLDSFL
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 583 --------FDFGLARIFGGNQDQAATKRLVGT-YGYMSPEYAMEGRFSEKSDVFSFGVLL 633
DFGLAR+ + + A T R + SPE +F+ SDV+S+G++L
Sbjct: 181 NSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 634 LEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM-EIIRC----V 688
E++S Y E W++ N +VI VD G+++ + C
Sbjct: 241 WEVMS-------YGER-------PYWEMSN-QDVIKAVD-----EGYRLPPPMDCPAALY 280
Query: 689 NVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
+ L C Q+ +RP +VS+L+ I++
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 12/131 (9%)
Query: 475 NPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLS 528
NP D V + + + L +LG+G FG V+ + QD +AVK L
Sbjct: 26 NPQYFSDACVHHIKR-----RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK 80
Query: 529 KASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGL- 587
+AS +++F E +++ LQH+++VR G C E ++++EYM + L+ FL G
Sbjct: 81 EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPD 140
Query: 588 ARIFGGNQDQA 598
A++ G +D A
Sbjct: 141 AKLLAGGEDVA 151
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG++R R + +M PE + +F+ +SDV+SFGV+L EI +
Sbjct: 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 133/330 (40%), Gaps = 87/330 (26%)
Query: 455 SKVQRLDLGEAYANFSTEK--VNPARLQD--LLVFNFEELANATNNFQLANKLGQGGFGP 510
S +RL G + + V+P +D V F + +ATN + +G G FG
Sbjct: 2 SDEKRLHFGNGHLKLPGLRTYVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGE 60
Query: 511 VYKGKLQDGQE----IAVKRLSKASGQGQE-EFMNEVMVISNLQHRNLVRLLGCCVEREE 565
V G+L+ + +A+K L + Q +F+ E ++ H N++RL G + +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 566 NMLIYEYMPNKSLDSFL------------------------------------------- 582
M++ EYM N SLDSFL
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 583 --------FDFGLARIFGGNQDQAATKRLVGT-YGYMSPEYAMEGRFSEKSDVFSFGVLL 633
DFGL+R+ + + A T R + SPE +F+ SDV+S+G++L
Sbjct: 181 NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 634 LEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM-EIIRC----V 688
E++S Y E W++ N +VI VD G+++ + C
Sbjct: 241 WEVMS-------YGER-------PYWEMSN-QDVIKAVD-----EGYRLPPPMDCPAALY 280
Query: 689 NVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
+ L C Q+ +RP +VS+L+ I++
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 133/330 (40%), Gaps = 87/330 (26%)
Query: 455 SKVQRLDLGEAYANFSTEK--VNPARLQD--LLVFNFEELANATNNFQLANKLGQGGFGP 510
S +RL G + + V+P +D V F + +ATN + +G G FG
Sbjct: 2 SDEKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGE 60
Query: 511 VYKGKLQDGQE----IAVKRLSKASGQGQE-EFMNEVMVISNLQHRNLVRLLGCCVEREE 565
V G+L+ + +A+K L + Q +F+ E ++ H N++RL G + +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 566 NMLIYEYMPNKSLDSFL------------------------------------------- 582
M++ EYM N SLDSFL
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 583 --------FDFGLARIFGGNQDQAATKRLVGT-YGYMSPEYAMEGRFSEKSDVFSFGVLL 633
DFGL+R+ + + A T R + SPE +F+ SDV+S+G++L
Sbjct: 181 NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 634 LEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM-EIIRC----V 688
E++S Y E W++ N +VI VD G+++ + C
Sbjct: 241 WEVMS-------YGER-------PYWEMSN-QDVIKAVD-----EGYRLPPPMDCPAALY 280
Query: 689 NVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
+ L C Q+ +RP +VS+L+ I++
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
Query: 495 NNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSKASGQGQEEFMNEVMVISNL 548
+N L +LG+G FG V+ + QD +AVK L AS +++F E +++NL
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG 586
QH ++V+ G CVE + ++++EYM + L+ FL G
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHG 110
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG++R + +M PE M +F+ +SDV+S GV+L EI +
Sbjct: 171 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 113/289 (39%), Gaps = 84/289 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+ QL +LG G FG V+ G ++A+K L K E F+ E ++ L+H LV+
Sbjct: 10 SLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQ 68
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSFL--------------------------------- 582
L V E ++ EYM SL FL
Sbjct: 69 LYA-VVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYI 127
Query: 583 -------------------FDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRFS 621
DFGLAR+ +D T R + + +PE A+ GRF+
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFT 184
Query: 622 EKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680
KSDV+SFG+LL E+V+ GR + N+ V++ V E G+
Sbjct: 185 IKSDVWSFGILLTELVTKGR----------------VPYPGMNNREVLEQV-----ERGY 223
Query: 681 KMEIIRCVNVGL--LCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPAF 727
+M + + L L + + KD PT L S ++D A +P +
Sbjct: 224 RMPCPQDCPISLHELMIHCWKKDPEERPT-FEYLQSFLEDYFTATEPQY 271
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 7/104 (6%)
Query: 502 KLGQGGFGPVYKGKL------QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+LG+G FG V+ + QD +AVK L +AS +++F E +++ LQH+++VR
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSFLFDFGL-ARIFGGNQDQA 598
G C E ++++EYM + L+ FL G A++ G +D A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA 122
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG++R R + +M PE + +F+ +SDV+SFGV+L EI +
Sbjct: 172 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 7/104 (6%)
Query: 502 KLGQGGFGPVYKGKL------QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+LG+G FG V+ + QD +AVK L +AS +++F E +++ LQH+++VR
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSFLFDFGL-ARIFGGNQDQA 598
G C E ++++EYM + L+ FL G A++ G +D A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA 128
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG++R R + +M PE + +F+ +SDV+SFGV+L EI +
Sbjct: 178 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 79/198 (39%), Gaps = 59/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 66
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L V E ++ EYM SL FL
Sbjct: 67 QLYA-VVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 125
Query: 583 --------------------FDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRF 620
DFGLAR+ +D T R + + +PE A+ GRF
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRF 182
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFG+LL E+ +
Sbjct: 183 TIKSDVWSFGILLTELTT 200
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 133/330 (40%), Gaps = 87/330 (26%)
Query: 455 SKVQRLDLGEAYANFSTEK--VNPARLQD--LLVFNFEELANATNNFQLANKLGQGGFGP 510
S +RL G + + V+P +D V F + +ATN + +G G FG
Sbjct: 2 SDEKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGE 60
Query: 511 VYKGKLQDGQE----IAVKRLSKASGQGQE-EFMNEVMVISNLQHRNLVRLLGCCVEREE 565
V G+L+ + +A+K L + Q +F+ E ++ H N++RL G + +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 566 NMLIYEYMPNKSLDSFL------------------------------------------- 582
M++ EYM N SLDSFL
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILI 180
Query: 583 --------FDFGLARIFGGNQDQAATKRLVGT-YGYMSPEYAMEGRFSEKSDVFSFGVLL 633
DFGL+R+ + + A T R + SPE +F+ SDV+S+G++L
Sbjct: 181 NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 634 LEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM-EIIRC----V 688
E++S Y E W++ N +VI VD G+++ + C
Sbjct: 241 WEVMS-------YGER-------PYWEMSN-QDVIKAVD-----EGYRLPPPMDCPAALY 280
Query: 689 NVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
+ L C Q+ +RP +VS+L+ I++
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 79/198 (39%), Gaps = 59/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L V E ++ EYM SL FL
Sbjct: 243 QLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 301
Query: 583 --------------------FDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRF 620
DFGLAR+ +D T R + + +PE A+ GRF
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFG+LL E+ +
Sbjct: 359 TIKSDVWSFGILLTELTT 376
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 133/330 (40%), Gaps = 87/330 (26%)
Query: 455 SKVQRLDLGEAYANFSTEK--VNPARLQD--LLVFNFEELANATNNFQLANKLGQGGFGP 510
S +RL G + + V+P +D V F + +ATN + +G G FG
Sbjct: 2 SDEKRLHFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGE 60
Query: 511 VYKGKLQDGQE----IAVKRLSKASGQGQE-EFMNEVMVISNLQHRNLVRLLGCCVEREE 565
V G+L+ + +A+K L + Q +F+ E ++ H N++RL G + +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 566 NMLIYEYMPNKSLDSFL------------------------------------------- 582
M++ EYM N SLDSFL
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 583 --------FDFGLARIFGGNQDQAATKRLVGT-YGYMSPEYAMEGRFSEKSDVFSFGVLL 633
DFGL+R+ + + A T R + SPE +F+ SDV+S+G++L
Sbjct: 181 NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 634 LEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM-EIIRC----V 688
E++S Y E W++ N +VI VD G+++ + C
Sbjct: 241 WEVMS-------YGER-------PYWEMSN-QDVIKAVD-----EGYRLPPPMDCPAALY 280
Query: 689 NVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
+ L C Q+ +RP +VS+L+ I++
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 133/330 (40%), Gaps = 87/330 (26%)
Query: 455 SKVQRLDLGEAYANFSTEK--VNPARLQD--LLVFNFEELANATNNFQLANKLGQGGFGP 510
S +RL G + + V+P +D V F + +ATN + +G G FG
Sbjct: 2 SDEKRLHFGNGHLKLPGLRTFVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGE 60
Query: 511 VYKGKLQDGQE----IAVKRLSKASGQGQE-EFMNEVMVISNLQHRNLVRLLGCCVEREE 565
V G+L+ + +A+K L + Q +F+ E ++ H N++RL G + +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 566 NMLIYEYMPNKSLDSFL------------------------------------------- 582
M++ EYM N SLDSFL
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 583 --------FDFGLARIFGGNQDQAATKRLVGT-YGYMSPEYAMEGRFSEKSDVFSFGVLL 633
DFGL+R+ + + A T R + SPE +F+ SDV+S+G++L
Sbjct: 181 NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 634 LEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM-EIIRC----V 688
E++S Y E W++ N +VI VD G+++ + C
Sbjct: 241 WEVMS-------YGER-------PYWEMSN-QDVIKAVD-----EGYRLPPPMDCPAALY 280
Query: 689 NVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
+ L C Q+ +RP +VS+L+ I++
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 132/327 (40%), Gaps = 87/327 (26%)
Query: 458 QRLDLGEAYANFSTEK--VNPARLQD--LLVFNFEELANATNNFQLANKLGQGGFGPVYK 513
+RL G + + V+P +D V F + +ATN + +G G FG V
Sbjct: 3 KRLHFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCS 61
Query: 514 GKLQDGQE----IAVKRLSKASGQGQE-EFMNEVMVISNLQHRNLVRLLGCCVEREENML 568
G+L+ + +A+K L + Q +F+ E ++ H N++RL G + + M+
Sbjct: 62 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 121
Query: 569 IYEYMPNKSLDSFL---------------------------------------------- 582
+ EYM N SLDSFL
Sbjct: 122 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 181
Query: 583 -----FDFGLARIFGGNQDQAATKRLVGT-YGYMSPEYAMEGRFSEKSDVFSFGVLLLEI 636
DFGL+R+ + + A T R + SPE +F+ SDV+S+G++L E+
Sbjct: 182 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 241
Query: 637 VSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM-EIIRC----VNVG 691
+S Y E W++ N +VI VD G+++ + C +
Sbjct: 242 MS-------YGER-------PYWEMSN-QDVIKAVD-----EGYRLPPPMDCPAALYQLM 281
Query: 692 LLCVQEFVKDRPNMPTVVSMLNSEIKD 718
L C Q+ +RP +VS+L+ I++
Sbjct: 282 LDCWQKDRNNRPKFEQIVSILDKLIRN 308
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 132/330 (40%), Gaps = 87/330 (26%)
Query: 455 SKVQRLDLGEAYANFSTEK--VNPARLQD--LLVFNFEELANATNNFQLANKLGQGGFGP 510
S +RL G + + V+P +D V F + +ATN + +G G FG
Sbjct: 2 SDEKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGE 60
Query: 511 VYKGKLQDGQE----IAVKRLSKASGQGQE-EFMNEVMVISNLQHRNLVRLLGCCVEREE 565
V G+L+ + +A+K L + Q +F+ E ++ H N++RL G + +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 566 NMLIYEYMPNKSLDSFL------------------------------------------- 582
M++ EYM N SLDSFL
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 583 --------FDFGLARIFGGNQDQAATKRLVGT-YGYMSPEYAMEGRFSEKSDVFSFGVLL 633
DFGL R+ + + A T R + SPE +F+ SDV+S+G++L
Sbjct: 181 NSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 634 LEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM-EIIRC----V 688
E++S Y E W++ N +VI VD G+++ + C
Sbjct: 241 WEVMS-------YGER-------PYWEMSN-QDVIKAVD-----EGYRLPPPMDCPAALY 280
Query: 689 NVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
+ L C Q+ +RP +VS+L+ I++
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 79/198 (39%), Gaps = 59/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L V E ++ EYM SL FL
Sbjct: 77 QLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 583 --------------------FDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRF 620
DFGLAR+ +D T R + + +PE A+ GRF
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRF 192
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFG+LL E+ +
Sbjct: 193 TIKSDVWSFGILLTELTT 210
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 79/197 (40%), Gaps = 59/197 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV+
Sbjct: 268 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQ 326
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSFL--------------------------------- 582
L V E ++ EYM SL FL
Sbjct: 327 LY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 385
Query: 583 -------------------FDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRFS 621
DFGLAR+ +D T R + + +PE A+ GRF+
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 442
Query: 622 EKSDVFSFGVLLLEIVS 638
KSDV+SFG+LL E+ +
Sbjct: 443 IKSDVWSFGILLTELTT 459
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 79/198 (39%), Gaps = 59/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L V E ++ EYM SL FL
Sbjct: 243 QLYA-VVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 301
Query: 583 --------------------FDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRF 620
DFGLAR+ +D T R + + +PE A+ GRF
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFG+LL E+ +
Sbjct: 359 TIKSDVWSFGILLTELTT 376
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 79/198 (39%), Gaps = 59/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L V E ++ EYM SL FL
Sbjct: 77 QLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 583 --------------------FDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRF 620
DFGLAR+ +D T R + + +PE A+ GRF
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFG+LL E+ +
Sbjct: 193 TIKSDVWSFGILLTELTT 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 79/198 (39%), Gaps = 59/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L V E ++ EYM SL FL
Sbjct: 77 QLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 583 --------------------FDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRF 620
DFGLAR+ +D T R + + +PE A+ GRF
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFG+LL E+ +
Sbjct: 193 TIKSDVWSFGILLTELTT 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 79/198 (39%), Gaps = 59/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L V E ++ EYM SL FL
Sbjct: 77 QLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 583 --------------------FDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRF 620
DFGLAR+ +D T R + + +PE A+ GRF
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFG+LL E+ +
Sbjct: 193 TIKSDVWSFGILLTELTT 210
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 79/198 (39%), Gaps = 59/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L V E ++ EYM SL FL
Sbjct: 77 QLYA-VVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 583 --------------------FDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRF 620
DFGLAR+ +D T R + + +PE A+ GRF
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFG+LL E+ +
Sbjct: 193 TIKSDVWSFGILLTELTT 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 78/196 (39%), Gaps = 55/196 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L V E ++ EYM SL FL
Sbjct: 74 QLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY 132
Query: 583 --------------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSE 622
DFGLAR+ N + A + + +PE A+ GRF+
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDN-EWTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 623 KSDVFSFGVLLLEIVS 638
KSDV+SFG+LL E+ +
Sbjct: 192 KSDVWSFGILLTELTT 207
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 79/198 (39%), Gaps = 59/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L V E ++ EYM SL FL
Sbjct: 74 QLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY 132
Query: 583 --------------------FDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRF 620
DFGLAR+ +D T R + + +PE A+ GRF
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 189
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFG+LL E+ +
Sbjct: 190 TIKSDVWSFGILLTELTT 207
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 121/297 (40%), Gaps = 83/297 (27%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQE----IAVKRLSKASGQGQE-EF 538
V F + +ATN + +G G FG V G+L+ + +A+K L + Q +F
Sbjct: 6 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 539 MNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL---------------- 582
+ E ++ H N++RL G + + M++ EYM N SLDSFL
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 583 -----------------------------------FDFGLARIFGGNQDQAATKRLVGT- 606
DFGL+R+ + + A T R
Sbjct: 125 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666
+ SPE +F+ SDV+S+G++L E++S Y E W++ N +
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGER-------PYWEMSN-QD 229
Query: 667 VIDLVDPLISESGFKM-EIIRC----VNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
VI VD G+++ + C + L C Q+ +RP +VS+L+ I++
Sbjct: 230 VIKAVD-----EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 78/197 (39%), Gaps = 59/197 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV+
Sbjct: 186 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQ 244
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSFL--------------------------------- 582
L V E ++ EYM SL FL
Sbjct: 245 LYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 303
Query: 583 -------------------FDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRFS 621
DFGL R+ +D T R + + +PE A+ GRF+
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 360
Query: 622 EKSDVFSFGVLLLEIVS 638
KSDV+SFG+LL E+ +
Sbjct: 361 IKSDVWSFGILLTELTT 377
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 59/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +LG G FG V GK + ++A+K + + S ++EF+ E V+ NL H LV
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 82
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L G C ++ +I EYM N L ++L
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 583 -------------------FDFGLARIFGGNQDQAATKRLVGT---YGYMSPEYAMEGRF 620
DFGL+R +++ ++ VG+ + PE M +F
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSS----VGSKFPVRWSPPEVLMYSKF 198
Query: 621 SEKSDVFSFGVLLLEIVS 638
S KSD+++FGVL+ EI S
Sbjct: 199 SSKSDIWAFGVLMWEIYS 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 121/297 (40%), Gaps = 83/297 (27%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQE----IAVKRLSKASGQGQE-EF 538
V F + +ATN + +G G FG V G+L+ + +A+K L + Q +F
Sbjct: 23 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 81
Query: 539 MNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL---------------- 582
+ E ++ H N++RL G + + M++ EYM N SLDSFL
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 141
Query: 583 -----------------------------------FDFGLARIFGGNQDQAATKRLVGT- 606
DFGL+R+ + + A T R
Sbjct: 142 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 201
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666
+ SPE +F+ SDV+S+G++L E++S Y E W++ N +
Sbjct: 202 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGER-------PYWEMSN-QD 246
Query: 667 VIDLVDPLISESGFKM-EIIRC----VNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
VI VD G+++ + C + L C Q+ +RP +VS+L+ I++
Sbjct: 247 VIKAVD-----EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 298
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 79/195 (40%), Gaps = 55/195 (28%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+L +LG G FG V+ G ++AVK L + S + F+ E ++ LQH+ LVR
Sbjct: 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR 72
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSF---------------------------------- 581
L V +E +I EYM N SL F
Sbjct: 73 LYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 131
Query: 582 ------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEK 623
+ DFGLAR+ N+ A + + +PE G F+ K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 624 SDVFSFGVLLLEIVS 638
SDV+SFG+LL EIV+
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 79/198 (39%), Gaps = 59/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ ++H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLV 76
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L V E ++ EYM SL FL
Sbjct: 77 QLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 583 --------------------FDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRF 620
DFGLAR+ +D T R + + +PE A+ GRF
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFG+LL E+ +
Sbjct: 193 TIKSDVWSFGILLTELTT 210
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 79/196 (40%), Gaps = 55/196 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+L +LG G FG V+ G ++AVK L + S + F+ E ++ LQH+ LV
Sbjct: 18 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 76
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF--------------------------------- 581
RL V +E +I EYM N SL F
Sbjct: 77 RLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 135
Query: 582 -------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSE 622
+ DFGLAR+ N+ A + + +PE G F+
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTI 194
Query: 623 KSDVFSFGVLLLEIVS 638
KSDV+SFG+LL EIV+
Sbjct: 195 KSDVWSFGILLTEIVT 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 79/196 (40%), Gaps = 55/196 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+L +LG G FG V+ G ++AVK L + S + F+ E ++ LQH+ LV
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 77
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF--------------------------------- 581
RL V +E +I EYM N SL F
Sbjct: 78 RLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 136
Query: 582 -------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSE 622
+ DFGLAR+ N + A + + +PE G F+
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEAINYGTFTI 195
Query: 623 KSDVFSFGVLLLEIVS 638
KSDV+SFG+LL EIV+
Sbjct: 196 KSDVWSFGILLTEIVT 211
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 78/198 (39%), Gaps = 59/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L V E ++ EYM L FL
Sbjct: 77 QLYA-VVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 583 --------------------FDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRF 620
DFGLAR+ +D T R + + +PE A+ GRF
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFG+LL E+ +
Sbjct: 193 TIKSDVWSFGILLTELTT 210
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 79/196 (40%), Gaps = 55/196 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+L +LG G FG V+ G ++AVK L + S + F+ E ++ LQH+ LV
Sbjct: 23 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 81
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF--------------------------------- 581
RL V +E +I EYM N SL F
Sbjct: 82 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 140
Query: 582 -------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSE 622
+ DFGLAR+ N + A + + +PE G F+
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEAINYGTFTI 199
Query: 623 KSDVFSFGVLLLEIVS 638
KSDV+SFG+LL EIV+
Sbjct: 200 KSDVWSFGILLTEIVT 215
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 78/198 (39%), Gaps = 59/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L V E ++ EYM L FL
Sbjct: 77 QLYA-VVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 583 --------------------FDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRF 620
DFGLAR+ +D T R + + +PE A+ GRF
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFG+LL E+ +
Sbjct: 193 TIKSDVWSFGILLTELTT 210
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 132/330 (40%), Gaps = 87/330 (26%)
Query: 455 SKVQRLDLGEAYANFSTEK--VNPARLQD--LLVFNFEELANATNNFQLANKLGQGGFGP 510
S +RL G + + V+P +D V F + +ATN + +G G FG
Sbjct: 2 SDEKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGE 60
Query: 511 VYKGKLQDGQE----IAVKRLSKASGQGQE-EFMNEVMVISNLQHRNLVRLLGCCVEREE 565
V G+L+ + +A+K L + Q +F+ E ++ H N++RL G + +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 566 NMLIYEYMPNKSLDSFL------------------------------------------- 582
M++ E M N SLDSFL
Sbjct: 121 VMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILI 180
Query: 583 --------FDFGLARIFGGNQDQAATKRLVGT-YGYMSPEYAMEGRFSEKSDVFSFGVLL 633
DFGL+R+ + + A T R + SPE +F+ SDV+S+G++L
Sbjct: 181 NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 634 LEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM-EIIRC----V 688
E++S Y E W++ N +VI VD G+++ + C
Sbjct: 241 WEVMS-------YGER-------PYWEMSN-QDVIKAVD-----EGYRLPPPMDCPAALY 280
Query: 689 NVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
+ L C Q+ +RP +VS+L+ I++
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 80/197 (40%), Gaps = 59/197 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+L +LG G FG V+ G ++AVK L + S + F+ E ++ LQH+ LVR
Sbjct: 10 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR 68
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSF---------------------------------- 581
L V +E +I EYM N SL F
Sbjct: 69 LYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 127
Query: 582 ------------------LFDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRFS 621
+ DFGLAR+ +D T R + + +PE G F+
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFT 184
Query: 622 EKSDVFSFGVLLLEIVS 638
KSDV+SFG+LL EIV+
Sbjct: 185 IKSDVWSFGILLTEIVT 201
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 80/197 (40%), Gaps = 59/197 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+L +LG G FG V+ G ++AVK L + S + F+ E ++ LQH+ LVR
Sbjct: 9 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR 67
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSF---------------------------------- 581
L V +E +I EYM N SL F
Sbjct: 68 LYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 126
Query: 582 ------------------LFDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRFS 621
+ DFGLAR+ +D T R + + +PE G F+
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFT 183
Query: 622 EKSDVFSFGVLLLEIVS 638
KSDV+SFG+LL EIV+
Sbjct: 184 IKSDVWSFGILLTEIVT 200
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 53/195 (27%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +LG G FG V GK + ++A+K + + S ++EF+ E V+ NL H LV
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 67
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L G C ++ +I EYM N L ++L
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 583 -------------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEK 623
DFGL+R + + + +++ + PE M +FS K
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSK 186
Query: 624 SDVFSFGVLLLEIVS 638
SD+++FGVL+ EI S
Sbjct: 187 SDIWAFGVLMWEIYS 201
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 132/330 (40%), Gaps = 87/330 (26%)
Query: 455 SKVQRLDLGEAYANFSTEK--VNPARLQD--LLVFNFEELANATNNFQLANKLGQGGFGP 510
S +RL G + + V+P +D V F + +ATN + +G G FG
Sbjct: 2 SDEKRLHFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGE 60
Query: 511 VYKG--KLQDGQEI--AVKRLSKASGQGQE-EFMNEVMVISNLQHRNLVRLLGCCVEREE 565
V G KL +EI A+K L + Q +F+ E ++ H N++RL G + +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 566 NMLIYEYMPNKSLDSFL------------------------------------------- 582
M++ E M N SLDSFL
Sbjct: 121 VMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 583 --------FDFGLARIFGGNQDQAATKRLVGT-YGYMSPEYAMEGRFSEKSDVFSFGVLL 633
DFGL+R+ + + A T R + SPE +F+ SDV+S+G++L
Sbjct: 181 NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 634 LEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM-EIIRC----V 688
E++S Y E W++ N +VI VD G+++ + C
Sbjct: 241 WEVMS-------YGER-------PYWEMSN-QDVIKAVD-----EGYRLPPPMDCPAALY 280
Query: 689 NVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
+ L C Q+ +RP +VS+L+ I++
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 65/210 (30%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQ-------EEFMNEVMV 544
A N + ++G+GGFG V+KG+L +D +A+K L +G+ +EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMP-----NKSLDS-----------FLFDFGLA 588
+SNL H N+V+L G ++ E++P ++ LD + D L
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 589 RIFGGNQDQAATKR-------------------------------------LVGTYGYMS 611
+ NQ+ R L+G + +M+
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMA 194
Query: 612 PEY--AMEGRFSEKSDVFSFGVLLLEIVSG 639
PE A E ++EK+D +SF ++L I++G
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 65/210 (30%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQ-------EEFMNEVMV 544
A N + ++G+GGFG V+KG+L +D +A+K L +G+ +EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMP-----NKSLDS-----------FLFDFGLA 588
+SNL H N+V+L G ++ E++P ++ LD + D L
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 589 RIFGGNQDQAATKR-------------------------------------LVGTYGYMS 611
+ NQ+ R L+G + +M+
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMA 194
Query: 612 PEY--AMEGRFSEKSDVFSFGVLLLEIVSG 639
PE A E ++EK+D +SF ++L I++G
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 65/210 (30%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQ-------EEFMNEVMV 544
A N + ++G+GGFG V+KG+L +D +A+K L +G+ +EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMP-----NKSLDS-----------FLFDFGLA 588
+SNL H N+V+L G ++ E++P ++ LD + D L
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 589 RIFGGNQDQAATKR-------------------------------------LVGTYGYMS 611
+ NQ+ R L+G + +M+
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMA 194
Query: 612 PEY--AMEGRFSEKSDVFSFGVLLLEIVSG 639
PE A E ++EK+D +SF ++L I++G
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 51/194 (26%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +LG G FG V GK + ++A+K + + S ++EF+ E V+ NL H LV
Sbjct: 8 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 66
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFLFD----FGLARIFGG----------------- 593
+L G C ++ +I EYM N L ++L + F ++
Sbjct: 67 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 126
Query: 594 NQDQAATKRLVGTYGYMS-----------------------------PEYAMEGRFSEKS 624
++D AA LV G + PE M +FS KS
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 625 DVFSFGVLLLEIVS 638
D+++FGVL+ EI S
Sbjct: 187 DIWAFGVLMWEIYS 200
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 59/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +LG G FG V GK + ++A+K + + S ++EF+ E V+ NL H LV
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 82
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L G C ++ +I EYM N L ++L
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 583 -------------------FDFGLARIFGGNQDQAATKRLVGT---YGYMSPEYAMEGRF 620
DFGL+R ++ ++ VG+ + PE M +F
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMYSKF 198
Query: 621 SEKSDVFSFGVLLLEIVS 638
S KSD+++FGVL+ EI S
Sbjct: 199 SSKSDIWAFGVLMWEIYS 216
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 51/194 (26%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +LG G FG V GK + ++A+K + + S ++EF+ E V+ NL H LV
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 67
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFLFD----FGLARIFGG----------------- 593
+L G C ++ +I EYM N L ++L + F ++
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 594 NQDQAATKRLVGTYGYMS-----------------------------PEYAMEGRFSEKS 624
++D AA LV G + PE M +FS KS
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 625 DVFSFGVLLLEIVS 638
D+++FGVL+ EI S
Sbjct: 188 DIWAFGVLMWEIYS 201
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 51/194 (26%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +LG G FG V GK + ++A+K + + S ++EF+ E V+ NL H LV
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFLFD----FGLARIFGG----------------- 593
+L G C ++ +I EYM N L ++L + F ++
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 122
Query: 594 NQDQAATKRLVGTYGYMS-----------------------------PEYAMEGRFSEKS 624
++D AA LV G + PE M +FS KS
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 625 DVFSFGVLLLEIVS 638
D+++FGVL+ EI S
Sbjct: 183 DIWAFGVLMWEIYS 196
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 59/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +LG G FG V GK + ++A+K + + S ++EF+ E V+ NL H LV
Sbjct: 15 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 73
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L G C ++ +I EYM N L ++L
Sbjct: 74 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 133
Query: 583 -------------------FDFGLARIFGGNQDQAATKRLVGT---YGYMSPEYAMEGRF 620
DFGL+R ++ ++ VG+ + PE M +F
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMYSKF 189
Query: 621 SEKSDVFSFGVLLLEIVS 638
S KSD+++FGVL+ EI S
Sbjct: 190 SSKSDIWAFGVLMWEIYS 207
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 120/297 (40%), Gaps = 83/297 (27%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQE----IAVKRLSKASGQGQE-EF 538
V F + +ATN + +G G FG V G+L+ + +A+K L + Q +F
Sbjct: 6 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 539 MNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL---------------- 582
+ E ++ H N++RL G + + M++ E M N SLDSFL
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 583 -----------------------------------FDFGLARIFGGNQDQAATKRLVGT- 606
DFGL+R+ + + A T R
Sbjct: 125 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666
+ SPE +F+ SDV+S+G++L E++S Y E W++ N +
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGER-------PYWEMSN-QD 229
Query: 667 VIDLVDPLISESGFKM-EIIRC----VNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
VI VD G+++ + C + L C Q+ +RP +VS+L+ I++
Sbjct: 230 VIKAVD-----EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 79/198 (39%), Gaps = 59/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+L +LG G G V+ G ++AVK L + S + F+ E ++ LQH+ LV
Sbjct: 13 ETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF--------------------------------- 581
RL V +E +I EYM N SL F
Sbjct: 72 RLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 582 -------------------LFDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRF 620
+ DFGLAR+ +D T R + + +PE G F
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLI---EDAEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFG+LL EIV+
Sbjct: 188 TIKSDVWSFGILLTEIVT 205
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 102/278 (36%), Gaps = 83/278 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L +LG G FG V+ G + ++AVK L K + F+ E ++ LQH LV
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLV 71
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF-------------LFDF---------------- 585
RL E +I EYM SL F L DF
Sbjct: 72 RLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 131
Query: 586 -----------------------GLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSE 622
GLAR+ N+ A + + +PE G F+
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAINFGCFTI 190
Query: 623 KSDVFSFGVLLLEIVS-------GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675
KSDV+SFG+LL EIV+ GR N +T L +++ N D
Sbjct: 191 KSDVWSFGILLYEIVTYGKIPYPGRTNADV------MTALSQGYRMPRVENCPD------ 238
Query: 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713
++ +C +E ++RP + S+L+
Sbjct: 239 ----------ELYDIMKMCWKEKAEERPTFDYLQSVLD 266
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 79/196 (40%), Gaps = 55/196 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF-------------LFDFGLARIFGG-------- 593
+L V E ++ EYM SL F L D A+I G
Sbjct: 243 QLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA-AQIASGMAYVERMN 300
Query: 594 --NQDQAATKRLVG-----------------------------TYGYMSPEYAMEGRFSE 622
++D A LVG + +PE A+ GRF+
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 623 KSDVFSFGVLLLEIVS 638
KSDV+SFG+LL E+ +
Sbjct: 361 KSDVWSFGILLTELTT 376
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 79/196 (40%), Gaps = 55/196 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 69
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF-------------LFDFGLARIFGG-------- 593
+L V E ++ EYM SL F L D A+I G
Sbjct: 70 QLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA-AQIASGMAYVERMN 127
Query: 594 --NQDQAATKRLVG-----------------------------TYGYMSPEYAMEGRFSE 622
++D A LVG + +PE A+ GRF+
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 187
Query: 623 KSDVFSFGVLLLEIVS 638
KSDV+SFG+LL E+ +
Sbjct: 188 KSDVWSFGILLTELTT 203
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 79/196 (40%), Gaps = 55/196 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 65
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF-------------LFDFGLARIFGG-------- 593
+L V E ++ EYM SL F L D A+I G
Sbjct: 66 QLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA-AQIASGMAYVERMN 123
Query: 594 --NQDQAATKRLVG-----------------------------TYGYMSPEYAMEGRFSE 622
++D A LVG + +PE A+ GRF+
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 183
Query: 623 KSDVFSFGVLLLEIVS 638
KSDV+SFG+LL E+ +
Sbjct: 184 KSDVWSFGILLTELTT 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 79/196 (40%), Gaps = 55/196 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 67
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF-------------LFDFGLARIFGG-------- 593
+L V E ++ EYM SL F L D A+I G
Sbjct: 68 QLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA-AQIASGMAYVERMN 125
Query: 594 --NQDQAATKRLVG-----------------------------TYGYMSPEYAMEGRFSE 622
++D A LVG + +PE A+ GRF+
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 623 KSDVFSFGVLLLEIVS 638
KSDV+SFG+LL E+ +
Sbjct: 186 KSDVWSFGILLTELTT 201
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 84/208 (40%), Gaps = 59/208 (28%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 269
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL---------------------- 582
+ ++H NLV+LLG C +I E+M +L +L
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 583 ------------------------------FDFGLARIFGGN--QDQAATKRLVGTYGYM 610
DFGL+R+ G+ A K + +
Sbjct: 330 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWT 386
Query: 611 SPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+PE +FS KSDV++FGVLL EI +
Sbjct: 387 APESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 84/208 (40%), Gaps = 59/208 (28%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 266
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL---------------------- 582
+ ++H NLV+LLG C +I E+M +L +L
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 326
Query: 583 ------------------------------FDFGLARIFGGN--QDQAATKRLVGTYGYM 610
DFGL+R+ G+ A K + +
Sbjct: 327 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWT 383
Query: 611 SPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+PE +FS KSDV++FGVLL EI +
Sbjct: 384 APESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 85/194 (43%), Gaps = 55/194 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVISNLQHRNL 553
+L +G+G FG V G + G ++AVK + + A+ Q F+ E V++ L+H NL
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNL 248
Query: 554 VRLLGCCVEREENM-LIYEYMPNKSLDSFLFDFGLARIFGGN------------------ 594
V+LLG VE + + ++ EYM SL +L G + + GG+
Sbjct: 249 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEG 307
Query: 595 -----QDQAATKRLVG-------------------------TYGYMSPEYAMEGRFSEKS 624
+D AA LV + +PE E +FS KS
Sbjct: 308 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKS 367
Query: 625 DVFSFGVLLLEIVS 638
DV+SFG+LL EI S
Sbjct: 368 DVWSFGILLWEIYS 381
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 84/208 (40%), Gaps = 59/208 (28%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 308
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL---------------------- 582
+ ++H NLV+LLG C +I E+M +L +L
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 368
Query: 583 ------------------------------FDFGLARIFGGN--QDQAATKRLVGTYGYM 610
DFGL+R+ G+ A K + +
Sbjct: 369 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWT 425
Query: 611 SPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+PE +FS KSDV++FGVLL EI +
Sbjct: 426 APESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 55/206 (26%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 67
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------- 584
+ ++H NLV+LLG C +I E+M +L +L +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 585 --------------------------------FGLARIFGGNQDQAATKRLVGTYGYMSP 612
FGL+R+ G+ A + +P
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAP 186
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E +FS KSDV++FGVLL EI +
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 59/201 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ ++G G FG V+ G + ++A+K + + +E+F+ E V+ L H LV
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 68
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L G C+E+ L++E+M + L +L
Sbjct: 69 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 128
Query: 583 -------------------FDFGLARIFGGNQDQAATKRLVGT---YGYMSPEYAMEGRF 620
DFG+ R +Q ++T GT + SPE R+
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRY 184
Query: 621 SEKSDVFSFGVLLLEIVSGRK 641
S KSDV+SFGVL+ E+ S K
Sbjct: 185 SSKSDVWSFGVLMWEVFSEGK 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 55/206 (26%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 63
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------- 584
+ ++H NLV+LLG C +I E+M +L +L +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 585 --------------------------------FGLARIFGGNQDQAATKRLVGTYGYMSP 612
FGL+R+ G+ A + +P
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAP 182
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E +FS KSDV++FGVLL EI +
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 78/185 (42%), Gaps = 43/185 (23%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLG G FG V+ ++AVK + K E F+ E V+ LQH LV
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 240
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF-------------LFDF------GLARIFGGN- 594
+ L V +E +I E+M SL F L DF G+A I N
Sbjct: 241 K-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY 299
Query: 595 --QDQAATKRLVGT-------------------YGYMSPEYAMEGRFSEKSDVFSFGVLL 633
+D A LV + +PE G F+ KSDV+SFG+LL
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 359
Query: 634 LEIVS 638
+EIV+
Sbjct: 360 MEIVT 364
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 85/194 (43%), Gaps = 55/194 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVISNLQHRNL 553
+L +G+G FG V G + G ++AVK + + A+ Q F+ E V++ L+H NL
Sbjct: 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNL 61
Query: 554 VRLLGCCVEREENM-LIYEYMPNKSLDSFLFDFGLARIFGGN------------------ 594
V+LLG VE + + ++ EYM SL +L G + + GG+
Sbjct: 62 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEG 120
Query: 595 -----QDQAATKRLVG-------------------------TYGYMSPEYAMEGRFSEKS 624
+D AA LV + +PE E +FS KS
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKS 180
Query: 625 DVFSFGVLLLEIVS 638
DV+SFG+LL EI S
Sbjct: 181 DVWSFGILLWEIYS 194
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 59/201 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ ++G G FG V+ G + ++A+K + + +E+F+ E V+ L H LV
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L G C+E+ L++E+M + L +L
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVI 125
Query: 583 -------------------FDFGLARIFGGNQDQAATKRLVGT---YGYMSPEYAMEGRF 620
DFG+ R +Q ++T GT + SPE R+
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRY 181
Query: 621 SEKSDVFSFGVLLLEIVSGRK 641
S KSDV+SFGVL+ E+ S K
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGK 202
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 59/201 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ ++G G FG V+ G + ++A+K + + +E+F+ E V+ L H LV
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L G C+E+ L++E+M + L +L
Sbjct: 64 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 123
Query: 583 -------------------FDFGLARIFGGNQDQAATKRLVGT---YGYMSPEYAMEGRF 620
DFG+ R +Q ++T GT + SPE R+
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRY 179
Query: 621 SEKSDVFSFGVLLLEIVSGRK 641
S KSDV+SFGVL+ E+ S K
Sbjct: 180 SSKSDVWSFGVLMWEVFSEGK 200
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 55/206 (26%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 67
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------- 584
+ ++H NLV+LLG C +I E+M +L +L +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 585 --------------------------------FGLARIFGGNQDQAATKRLVGTYGYMSP 612
FGL+R+ G+ A + +P
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAP 186
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E +FS KSDV++FGVLL EI +
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 59/201 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ ++G G FG V+ G + ++A+K + + +E+F+ E V+ L H LV
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L G C+E+ L++E+M + L +L
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 125
Query: 583 -------------------FDFGLARIFGGNQDQAATKRLVGT---YGYMSPEYAMEGRF 620
DFG+ R +Q ++T GT + SPE R+
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRY 181
Query: 621 SEKSDVFSFGVLLLEIVSGRK 641
S KSDV+SFGVL+ E+ S K
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGK 202
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 55/206 (26%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 67
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------- 584
+ ++H NLV+LLG C +I E+M +L +L +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 585 --------------------------------FGLARIFGGNQDQAATKRLVGTYGYMSP 612
FGL+R+ G+ A + +P
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAP 186
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E +FS KSDV++FGVLL EI +
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 79/199 (39%), Gaps = 59/199 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNL 553
+ + +KLG G +G VY G + +AVK L K EEF+ E V+ ++H NL
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 90
Query: 554 VRLLGCCVEREENMLIYEYMPNKSLDSFLFD----------------------------- 584
V+LLG C ++ EYMP +L +L +
Sbjct: 91 VQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN 150
Query: 585 -----------------------FGLARIFGGN--QDQAATKRLVGTYGYMSPEYAMEGR 619
FGL+R+ G+ A K + + +PE
Sbjct: 151 FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNT 207
Query: 620 FSEKSDVFSFGVLLLEIVS 638
FS KSDV++FGVLL EI +
Sbjct: 208 FSIKSDVWAFGVLLWEIAT 226
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 55/194 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVISNLQHRNL 553
+L +G+G FG V G + G ++AVK + + A+ Q F+ E V++ L+H NL
Sbjct: 21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNL 76
Query: 554 VRLLGCCVEREENM-LIYEYMPNKSLDSFLFDFGLARIFGGN------------------ 594
V+LLG VE + + ++ EYM SL +L G + + GG+
Sbjct: 77 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEG 135
Query: 595 -----QDQAATKRLVGT--------YG-----------------YMSPEYAMEGRFSEKS 624
+D AA LV +G + +PE E +FS KS
Sbjct: 136 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKS 195
Query: 625 DVFSFGVLLLEIVS 638
DV+SFG+LL EI S
Sbjct: 196 DVWSFGILLWEIYS 209
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 55/206 (26%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 62
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------- 584
+ ++H NLV+LLG C +I E+M +L +L +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 585 --------------------------------FGLARIFGGNQDQAATKRLVGTYGYMSP 612
FGL+R+ G+ A + +P
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAP 181
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E +FS KSDV++FGVLL EI +
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 55/206 (26%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 66
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------- 584
+ ++H NLV+LLG C +I E+M +L +L +
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 126
Query: 585 --------------------------------FGLARIFGGNQDQAATKRLVGTYGYMSP 612
FGL+R+ G+ A + +P
Sbjct: 127 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAP 185
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E +FS KSDV++FGVLL EI +
Sbjct: 186 ESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 55/206 (26%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 62
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------- 584
+ ++H NLV+LLG C +I E+M +L +L +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 585 --------------------------------FGLARIFGGNQDQAATKRLVGTYGYMSP 612
FGL+R+ G+ A + +P
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAP 181
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E +FS KSDV++FGVLL EI +
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 55/206 (26%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 64
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------- 584
+ ++H NLV+LLG C +I E+M +L +L +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 585 --------------------------------FGLARIFGGNQDQAATKRLVGTYGYMSP 612
FGL+R+ G+ A + +P
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAP 183
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E +FS KSDV++FGVLL EI +
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 55/206 (26%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 62
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------- 584
+ ++H NLV+LLG C +I E+M +L +L +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 585 --------------------------------FGLARIFGGNQDQAATKRLVGTYGYMSP 612
FGL+R+ G+ A + +P
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAP 181
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E +FS KSDV++FGVLL EI +
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 84/208 (40%), Gaps = 59/208 (28%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 67
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------- 584
+ ++H NLV+LLG C +I E+M +L +L +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 127
Query: 585 --------------------------------FGLARIFGGN--QDQAATKRLVGTYGYM 610
FGL+R+ G+ A K + +
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWT 184
Query: 611 SPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+PE +FS KSDV++FGVLL EI +
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 55/206 (26%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 63
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------- 584
+ ++H NLV+LLG C +I E+M +L +L +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 585 --------------------------------FGLARIFGGNQDQAATKRLVGTYGYMSP 612
FGL+R+ G+ A + +P
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAP 182
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E +FS KSDV++FGVLL EI +
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 78/197 (39%), Gaps = 55/197 (27%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNL 553
+ + +KLG G FG VY+G + +AVK L K EEF+ E V+ ++H NL
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 554 VRLLGCCVEREENMLIYEYMPNKSLDSFLFD----------------------------- 584
V+LLG C +I E+M +L +L +
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 585 -----------------------FGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
FGL+R+ G+ A + +PE +FS
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFS 188
Query: 622 EKSDVFSFGVLLLEIVS 638
KSDV++FGVLL EI +
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 55/206 (26%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 62
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------- 584
+ ++H NLV+LLG C +I E+M +L +L +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 585 --------------------------------FGLARIFGGNQDQAATKRLVGTYGYMSP 612
FGL+R+ G+ A + +P
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAP 181
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E +FS KSDV++FGVLL EI +
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 55/194 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVISNLQHRNL 553
+L +G+G FG V G + G ++AVK + + A+ Q F+ E V++ L+H NL
Sbjct: 12 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNL 67
Query: 554 VRLLGCCVEREENM-LIYEYMPNKSLDSFLFDFGLARIFGGN------------------ 594
V+LLG VE + + ++ EYM SL +L G + + GG+
Sbjct: 68 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEG 126
Query: 595 -----QDQAATKRLVG-------------------------TYGYMSPEYAMEGRFSEKS 624
+D AA LV + +PE E FS KS
Sbjct: 127 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKS 186
Query: 625 DVFSFGVLLLEIVS 638
DV+SFG+LL EI S
Sbjct: 187 DVWSFGILLWEIYS 200
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 55/206 (26%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 62
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------- 584
+ ++H NLV+LLG C +I E+M +L +L +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 585 --------------------------------FGLARIFGGNQDQAATKRLVGTYGYMSP 612
FGL+R+ G+ A + +P
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAP 181
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E +FS KSDV++FGVLL EI +
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 59/201 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ ++G G FG V+ G + ++A+K + + S +++F+ E V+ L H LV
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLV 85
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L G C+E+ L++E+M + L +L
Sbjct: 86 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 145
Query: 583 -------------------FDFGLARIFGGNQDQAATKRLVGT---YGYMSPEYAMEGRF 620
DFG+ R +Q ++T GT + SPE R+
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRY 201
Query: 621 SEKSDVFSFGVLLLEIVSGRK 641
S KSDV+SFGVL+ E+ S K
Sbjct: 202 SSKSDVWSFGVLMWEVFSEGK 222
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 79/194 (40%), Gaps = 53/194 (27%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+L +LG G FG V+ G ++AVK L + S + F+ E ++ LQH+ LVR
Sbjct: 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR 72
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSF-------------LFDF------GLARIFGGN-- 594
L V +E +I EYM N SL F L D G+A I N
Sbjct: 73 LYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 131
Query: 595 ----------------------------QDQAATKRLVGTY--GYMSPEYAMEGRFSEKS 624
+D T R + + +PE G F+ KS
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 625 DVFSFGVLLLEIVS 638
DV+SFG+LL EIV+
Sbjct: 192 DVWSFGILLTEIVT 205
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 55/206 (26%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 64
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------- 584
+ ++H NLV+LLG C +I E+M +L +L +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 585 --------------------------------FGLARIFGGNQDQAATKRLVGTYGYMSP 612
FGL+R+ G+ A + +P
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAP 183
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E +FS KSDV++FGVLL EI +
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 55/206 (26%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 64
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------- 584
+ ++H NLV+LLG C +I E+M +L +L +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 585 --------------------------------FGLARIFGGNQDQAATKRLVGTYGYMSP 612
FGL+R+ G+ A + +P
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAP 183
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E +FS KSDV++FGVLL EI +
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 84/208 (40%), Gaps = 59/208 (28%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 62
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------- 584
+ ++H NLV+LLG C +I E+M +L +L +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 585 --------------------------------FGLARIFGGN--QDQAATKRLVGTYGYM 610
FGL+R+ G+ A K + +
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWT 179
Query: 611 SPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+PE +FS KSDV++FGVLL EI +
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 84/208 (40%), Gaps = 59/208 (28%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 67
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------- 584
+ ++H NLV+LLG C +I E+M +L +L +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 585 --------------------------------FGLARIFGGN--QDQAATKRLVGTYGYM 610
FGL+R+ G+ A K + +
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWT 184
Query: 611 SPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+PE +FS KSDV++FGVLL EI +
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 79/194 (40%), Gaps = 53/194 (27%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+L +LG G FG V+ G ++AVK L + S + F+ E ++ LQH+ LVR
Sbjct: 15 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR 73
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSF-------------LFDF------GLARIFGGN-- 594
L V +E +I EYM N SL F L D G+A I N
Sbjct: 74 LYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 132
Query: 595 ----------------------------QDQAATKRLVGTY--GYMSPEYAMEGRFSEKS 624
+D T R + + +PE G F+ KS
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 625 DVFSFGVLLLEIVS 638
DV+SFG+LL EIV+
Sbjct: 193 DVWSFGILLTEIVT 206
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 79/194 (40%), Gaps = 53/194 (27%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+L +LG G FG V+ G ++AVK L + S + F+ E ++ LQH+ LVR
Sbjct: 16 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR 74
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSF-------------LFDF------GLARIFGGN-- 594
L V +E +I EYM N SL F L D G+A I N
Sbjct: 75 LYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 133
Query: 595 ----------------------------QDQAATKRLVGTY--GYMSPEYAMEGRFSEKS 624
+D T R + + +PE G F+ KS
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 625 DVFSFGVLLLEIVS 638
DV+SFG+LL EIV+
Sbjct: 194 DVWSFGILLTEIVT 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 55/206 (26%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L K EEF+ E V
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 75
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------- 584
+ ++H NLV+LLG C +I E+M +L +L +
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 585 --------------------------------FGLARIFGGNQDQAATKRLVGTYGYMSP 612
FGL+R+ G+ A + +P
Sbjct: 136 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAP 194
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E +FS KSDV++FGVLL EI +
Sbjct: 195 ESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 78/197 (39%), Gaps = 55/197 (27%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNL 553
+ + +KLG G +G VY+G + +AVK L K EEF+ E V+ ++H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 554 VRLLGCCVEREENMLIYEYMPNKSLDSFLFD----------------------------- 584
V+LLG C +I E+M +L +L +
Sbjct: 70 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 585 -----------------------FGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
FGL+R+ G+ A + +PE +FS
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFS 188
Query: 622 EKSDVFSFGVLLLEIVS 638
KSDV++FGVLL EI +
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 79/195 (40%), Gaps = 53/195 (27%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+L +LG G FG V+ G ++AVK L + S + F+ E ++ LQH+ LV
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF-------------LFDF------GLARIFGGN- 594
RL V +E +I EYM N SL F L D G+A I N
Sbjct: 72 RLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 595 -----------------------------QDQAATKRLVGTY--GYMSPEYAMEGRFSEK 623
+D T R + + +PE G F+ K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 624 SDVFSFGVLLLEIVS 638
SDV+SFG+LL EIV+
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 111/296 (37%), Gaps = 92/296 (31%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKA-SGQGQEEFMNEVMVISN 547
N L LG G FG VY+G++ ++AVK L + S Q + +F+ E ++IS
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYM-------------PNKSLDSFLFDFGLARI---- 590
H+N+VR +G ++ ++ E M P S S L L +
Sbjct: 91 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 591 -------------------------------------FGGNQD--QAATKRLVG----TY 607
FG QD +A+ R G
Sbjct: 151 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPV 210
Query: 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNV 667
+M PE MEG F+ K+D +SFGVLL EI F L + Y K ++ V
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEI-------------FSLGYMPYPSK--SNQEV 255
Query: 668 IDLVDPLISESGFKMEIIR-----CVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
++ V SG +M+ + + C Q +DRPN ++ + +D
Sbjct: 256 LEFVT-----SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 59/201 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ ++G G FG V+ G + ++A+K + + +E+F+ E V+ L H LV
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 66
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
+L G C+E+ L+ E+M + L +L
Sbjct: 67 QLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 126
Query: 583 -------------------FDFGLARIFGGNQDQAATKRLVGT---YGYMSPEYAMEGRF 620
DFG+ R +Q ++T GT + SPE R+
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRY 182
Query: 621 SEKSDVFSFGVLLLEIVSGRK 641
S KSDV+SFGVL+ E+ S K
Sbjct: 183 SSKSDVWSFGVLMWEVFSEGK 203
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 79/195 (40%), Gaps = 53/195 (27%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+L +LG G FG V+ G ++AVK L + S + F+ E ++ LQH+ LV
Sbjct: 22 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 80
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF-------------LFDF------GLARIFGGN- 594
RL V +E +I EYM N SL F L D G+A I N
Sbjct: 81 RLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 139
Query: 595 -----------------------------QDQAATKRLVGTY--GYMSPEYAMEGRFSEK 623
+D T R + + +PE G F+ K
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 199
Query: 624 SDVFSFGVLLLEIVS 638
SDV+SFG+LL EIV+
Sbjct: 200 SDVWSFGILLTEIVT 214
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 124/311 (39%), Gaps = 91/311 (29%)
Query: 485 FNFEELANATNNF---------QLANKLGQGGFGPVYKGKLQ-DGQE---IAVKRLSKA- 530
F FE+ A F ++ +G G FG V G+L+ G+ +A+K L
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 531 SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL-------- 582
+ + + +F++E ++ H N++ L G + + M+I EYM N SLD+FL
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 583 -------------------------------------------FDFGLARIFGGNQDQAA 599
DFG++R+ + + A
Sbjct: 130 VIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY 189
Query: 600 TKRLVGT-YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA 658
T R + +PE +F+ SDV+S+G+++ E++S Y
Sbjct: 190 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS------------------YG 231
Query: 659 WKLWNDNNVIDLVDPLISESGFKME-----IIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713
+ + D + D++ + E G+++ I + L C Q+ DRP +V+ML+
Sbjct: 232 ERPYWDMSNQDVIKAI--EEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 289
Query: 714 SEIKDLPAAKQ 724
I++ + K+
Sbjct: 290 KLIRNPNSLKR 300
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 79/195 (40%), Gaps = 53/195 (27%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+L +LG G FG V+ G ++AVK L + S + F+ E ++ LQH+ LV
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 77
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF-------------LFDF------GLARIFGGN- 594
RL V +E +I EYM N SL F L D G+A I N
Sbjct: 78 RLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 136
Query: 595 -----------------------------QDQAATKRLVGTY--GYMSPEYAMEGRFSEK 623
+D T R + + +PE G F+ K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 624 SDVFSFGVLLLEIVS 638
SDV+SFG+LL EIV+
Sbjct: 197 SDVWSFGILLTEIVT 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 79/195 (40%), Gaps = 53/195 (27%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+L +LG G FG V+ G ++AVK L + S + F+ E ++ LQH+ LV
Sbjct: 21 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 79
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF-------------LFDF------GLARIFGGN- 594
RL V +E +I EYM N SL F L D G+A I N
Sbjct: 80 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 138
Query: 595 -----------------------------QDQAATKRLVGTY--GYMSPEYAMEGRFSEK 623
+D T R + + +PE G F+ K
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 198
Query: 624 SDVFSFGVLLLEIVS 638
SDV+SFG+LL EIV+
Sbjct: 199 SDVWSFGILLTEIVT 213
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 113/297 (38%), Gaps = 94/297 (31%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKA-SGQGQEEFMNEVMVISN 547
N L LG G FG VY+G++ ++AVK L + S Q + +F+ E ++IS
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 548 LQHRNLVRLLGC------------------------------------------------ 559
L H+N+VR +G
Sbjct: 91 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 560 ---CVEREENMLIYEYM---------PNKSLDSFLFDFGLAR-IFGGNQDQAATKRLVGT 606
C EEN I+ + P + + DFG+AR I+ + + ++
Sbjct: 151 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 210
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666
+M PE MEG F+ K+D +SFGVLL EI F L + Y K ++
Sbjct: 211 -KWMPPEAFMEGIFTSKTDTWSFGVLLWEI-------------FSLGYMPYPSK--SNQE 254
Query: 667 VIDLVDPLISESGFKMEIIR-----CVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
V++ V SG +M+ + + C Q +DRPN ++ + +D
Sbjct: 255 VLEFVT-----SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 78/198 (39%), Gaps = 58/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLG G FG V+ G + ++AVK L K + F+ E ++ LQH LV
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLV 70
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF-------------LFDF---------------- 585
RL + E +I E+M SL F L DF
Sbjct: 71 RLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 130
Query: 586 -----------------------GLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRF 620
GLAR+ +D T R + + +PE G F
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGCF 187
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KS+V+SFG+LL EIV+
Sbjct: 188 TIKSNVWSFGILLYEIVT 205
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 113/297 (38%), Gaps = 94/297 (31%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKA-SGQGQEEFMNEVMVISN 547
N L LG G FG VY+G++ ++AVK L + S Q + +F+ E ++IS
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 548 LQHRNLVRLLGC------------------------------------------------ 559
L H+N+VR +G
Sbjct: 105 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 560 ---CVEREENMLIYEYM---------PNKSLDSFLFDFGLAR-IFGGNQDQAATKRLVGT 606
C EEN I+ + P + + DFG+AR I+ + + ++
Sbjct: 165 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666
+M PE MEG F+ K+D +SFGVLL EI F L + Y K ++
Sbjct: 225 -KWMPPEAFMEGIFTSKTDTWSFGVLLWEI-------------FSLGYMPYPSK--SNQE 268
Query: 667 VIDLVDPLISESGFKMEIIR-----CVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
V++ V SG +M+ + + C Q +DRPN ++ + +D
Sbjct: 269 VLEFVT-----SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 77/196 (39%), Gaps = 62/196 (31%)
Query: 503 LGQGGFGPVYKGKLQDGQ-----EIAVKRLSKASGQGQE-EFMNEVMVISNLQHRNLVRL 556
+G G FG VYKG L+ +A+K L + Q +F+ E ++ H N++RL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 557 LGCCVEREENMLIYEYMPNKSLDSFL---------------------------------- 582
G + + M+I EYM N +LD FL
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHR 171
Query: 583 -----------------FDFGLARIFGGNQDQAATKRLVG---TYGYMSPEYAMEGRFSE 622
DFGL+R+ D AT G + +PE +F+
Sbjct: 172 DLAARNILVNSNLVCKVSDFGLSRVL--EDDPEATYTTSGGKIPIRWTAPEAISYRKFTS 229
Query: 623 KSDVFSFGVLLLEIVS 638
SDV+SFG+++ E+++
Sbjct: 230 ASDVWSFGIVMWEVMT 245
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 59/202 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGK---LQD--GQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
+ + +LG+G FG V + LQD G+ +AVK+L ++ + +F E+ ++ +LQH
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 551 RNLVRLLGCCVE--REENMLIYEYMPNKSLDSF--------------------------- 581
N+V+ G C R LI EY+P SL +
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL 133
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRL-VGTYGYMSPEYAM 616
+ DFGL ++ +++ K + +PE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 617 EGRFSEKSDVFSFGVLLLEIVS 638
E +FS SDV+SFGV+L E+ +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 58/193 (30%)
Query: 503 LGQGGFGPVYKGK-LQDGQ----EIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRL 556
LG G FG VYKG + +G+ +A+K L++ +G + EFM+E ++++++ H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 557 LGCCVEREENMLIYEYMPNKSLDSFLF--------------------------------- 583
LG C+ L+ + MP+ L ++
Sbjct: 106 LGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 164
Query: 584 ------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSD 625
DFGLAR+ G++ + +M+ E +F+ +SD
Sbjct: 165 DLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSD 224
Query: 626 VFSFGVLLLEIVS 638
V+S+GV + E+++
Sbjct: 225 VWSYGVTIWELMT 237
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 77/196 (39%), Gaps = 55/196 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLG G FG V+ ++AVK + K E F+ E V+ LQH LV
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 73
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF-------------LFDF---------------- 585
+ L V +E +I E+M SL F L DF
Sbjct: 74 K-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY 132
Query: 586 -----------------------GLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSE 622
GLAR+ N+ A + + +PE G F+
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAINFGSFTI 191
Query: 623 KSDVFSFGVLLLEIVS 638
KSDV+SFG+LL+EIV+
Sbjct: 192 KSDVWSFGILLMEIVT 207
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 59/202 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGK---LQD--GQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
+ + +LG+G FG V + LQD G+ +AVK+L ++ + +F E+ ++ +LQH
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 75
Query: 551 RNLVRLLGCCVE--REENMLIYEYMPNKSLDSF--------------------------- 581
N+V+ G C R LI EY+P SL +
Sbjct: 76 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 135
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRL-VGTYGYMSPEYAM 616
+ DFGL ++ +++ K + +PE
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 617 EGRFSEKSDVFSFGVLLLEIVS 638
E +FS SDV+SFGV+L E+ +
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 59/202 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGK---LQD--GQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
+ + +LG+G FG V + LQD G+ +AVK+L ++ + +F E+ ++ +LQH
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 76
Query: 551 RNLVRLLGCCVE--REENMLIYEYMPNKSLDSF--------------------------- 581
N+V+ G C R LI EY+P SL +
Sbjct: 77 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 136
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRL-VGTYGYMSPEYAM 616
+ DFGL ++ +++ K + +PE
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 617 EGRFSEKSDVFSFGVLLLEIVS 638
E +FS SDV+SFGV+L E+ +
Sbjct: 197 ESKFSVASDVWSFGVVLYELFT 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 59/202 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGK---LQD--GQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
+ + +LG+G FG V + LQD G+ +AVK+L ++ + +F E+ ++ +LQH
Sbjct: 18 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 77
Query: 551 RNLVRLLGCCVE--REENMLIYEYMPNKSLDSF--------------------------- 581
N+V+ G C R LI EY+P SL +
Sbjct: 78 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 137
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRL-VGTYGYMSPEYAM 616
+ DFGL ++ +++ K + +PE
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 617 EGRFSEKSDVFSFGVLLLEIVS 638
E +FS SDV+SFGV+L E+ +
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 58/193 (30%)
Query: 503 LGQGGFGPVYKGK-LQDGQ----EIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRL 556
LG G FG VYKG + +G+ +A+K L++ +G + EFM+E ++++++ H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 557 LGCCVEREENMLIYEYMPNKSLDSFLF--------------------------------- 583
LG C+ L+ + MP+ L ++
Sbjct: 83 LGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 141
Query: 584 ------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSD 625
DFGLAR+ G++ + +M+ E +F+ +SD
Sbjct: 142 DLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSD 201
Query: 626 VFSFGVLLLEIVS 638
V+S+GV + E+++
Sbjct: 202 VWSYGVTIWELMT 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 59/202 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGK---LQD--GQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
+ + +LG+G FG V + LQD G+ +AVK+L ++ + +F E+ ++ +LQH
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 101
Query: 551 RNLVRLLGCCVE--REENMLIYEYMPNKSLDSF--------------------------- 581
N+V+ G C R LI EY+P SL +
Sbjct: 102 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 161
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRL-VGTYGYMSPEYAM 616
+ DFGL ++ +++ K + +PE
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 617 EGRFSEKSDVFSFGVLLLEIVS 638
E +FS SDV+SFGV+L E+ +
Sbjct: 222 ESKFSVASDVWSFGVVLYELFT 243
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 59/202 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGK---LQD--GQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
+ + +LG+G FG V + LQD G+ +AVK+L ++ + +F E+ ++ +LQH
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 88
Query: 551 RNLVRLLGCCVE--REENMLIYEYMPNKSLDSF--------------------------- 581
N+V+ G C R LI EY+P SL +
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRL-VGTYGYMSPEYAM 616
+ DFGL ++ +++ K + +PE
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 617 EGRFSEKSDVFSFGVLLLEIVS 638
E +FS SDV+SFGV+L E+ +
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 498 QLANKLGQGGFGPVYKGKL------QDGQEIAVKRLS-KASGQGQEEFMNEVMVISNLQH 550
+ +LG+ FG VYKG L + Q +A+K L KA G +EEF +E M+ + LQH
Sbjct: 12 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQH 71
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATK 601
N+V LLG + + +I+ Y + L FL G D K
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 566 NMLIYEYMPNKSLDSFLFDFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS 624
N+L+Y+ L+ + D GL R ++ + + L+ +M+PE M G+FS S
Sbjct: 158 NVLVYD-----KLNVKISDLGLFREVYAADYYKLLGNSLLPI-RWMAPEAIMYGKFSIDS 211
Query: 625 DVFSFGVLLLEIVS 638
D++S+GV+L E+ S
Sbjct: 212 DIWSYGVVLWEVFS 225
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 78/198 (39%), Gaps = 59/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLG G FG V+ ++AVK + K E F+ E V+ LQH LV
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 246
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF-------------LFDF---------------- 585
+ L V +E +I E+M SL F L DF
Sbjct: 247 K-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY 305
Query: 586 -----------------------GLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRF 620
GLAR+ +D T R + + +PE G F
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGSF 362
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFG+LL+EIV+
Sbjct: 363 TIKSDVWSFGILLMEIVT 380
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 59/202 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGK---LQD--GQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
+ + +LG+G FG V + LQD G+ +AVK+L ++ + +F E+ ++ +LQH
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 88
Query: 551 RNLVRLLGCCVE--REENMLIYEYMPNKSLDSF--------------------------- 581
N+V+ G C R LI EY+P SL +
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRL-VGTYGYMSPEYAM 616
+ DFGL ++ +++ K + +PE
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 617 EGRFSEKSDVFSFGVLLLEIVS 638
E +FS SDV+SFGV+L E+ +
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 80/199 (40%), Gaps = 59/199 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNL 553
+ + +KLG G +G VY+G + +AVK L K EEF+ E V+ ++H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 554 VRLLGCCVEREENMLIYEYMPNKSLDSFLFD----------------------------- 584
V+LLG C +I E+M +L +L +
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 585 -----------------------FGLARIFGGN--QDQAATKRLVGTYGYMSPEYAMEGR 619
FGL+R+ G+ A K + + +PE +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI---KWTAPESLAYNK 186
Query: 620 FSEKSDVFSFGVLLLEIVS 638
FS KSDV++FGVLL EI +
Sbjct: 187 FSIKSDVWAFGVLLWEIAT 205
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 498 QLANKLGQGGFGPVYKGKL------QDGQEIAVKRLS-KASGQGQEEFMNEVMVISNLQH 550
+ +LG+ FG VYKG L + Q +A+K L KA G +EEF +E M+ + LQH
Sbjct: 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQH 88
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATK 601
N+V LLG + + +I+ Y + L FL G D K
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 139
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 566 NMLIYEYMPNKSLDSFLFDFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS 624
N+L+Y+ L+ + D GL R ++ + + L+ +M+PE M G+FS S
Sbjct: 175 NVLVYD-----KLNVKISDLGLFREVYAADYYKLLGNSLLPI-RWMAPEAIMYGKFSIDS 228
Query: 625 DVFSFGVLLLEIVS 638
D++S+GV+L E+ S
Sbjct: 229 DIWSYGVVLWEVFS 242
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 112/297 (37%), Gaps = 94/297 (31%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKA-SGQGQEEFMNEVMVISN 547
N L LG G FG VY+G++ ++AVK L + S Q + +F+ E ++IS
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 548 LQHRNLVRLLGC------------------------------------------------ 559
H+N+VR +G
Sbjct: 91 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 560 ---CVEREENMLIYEYM---------PNKSLDSFLFDFGLAR-IFGGNQDQAATKRLVGT 606
C EEN I+ + P + + DFG+AR I+ + + ++
Sbjct: 151 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 210
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666
+M PE MEG F+ K+D +SFGVLL EI F L + Y K ++
Sbjct: 211 -KWMPPEAFMEGIFTSKTDTWSFGVLLWEI-------------FSLGYMPYPSK--SNQE 254
Query: 667 VIDLVDPLISESGFKMEIIR-----CVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
V++ V SG +M+ + + C Q +DRPN ++ + +D
Sbjct: 255 VLEFVT-----SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 59/202 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGK---LQD--GQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
+ + +LG+G FG V + LQD G+ +AVK+L ++ + +F E+ ++ +LQH
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 71
Query: 551 RNLVRLLGCCVE--REENMLIYEYMPNKSLDSF--------------------------- 581
N+V+ G C R LI EY+P SL +
Sbjct: 72 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 131
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRL-VGTYGYMSPEYAM 616
+ DFGL ++ +++ K + +PE
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 617 EGRFSEKSDVFSFGVLLLEIVS 638
E +FS SDV+SFGV+L E+ +
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 112/297 (37%), Gaps = 94/297 (31%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKA-SGQGQEEFMNEVMVISN 547
N L LG G FG VY+G++ ++AVK L + S Q + +F+ E ++IS
Sbjct: 37 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 96
Query: 548 LQHRNLVRLLGC------------------------------------------------ 559
H+N+VR +G
Sbjct: 97 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 156
Query: 560 ---CVEREENMLIYEYM---------PNKSLDSFLFDFGLAR-IFGGNQDQAATKRLVGT 606
C EEN I+ + P + + DFG+AR I+ + + ++
Sbjct: 157 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 216
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666
+M PE MEG F+ K+D +SFGVLL EI F L + Y K ++
Sbjct: 217 -KWMPPEAFMEGIFTSKTDTWSFGVLLWEI-------------FSLGYMPYPSK--SNQE 260
Query: 667 VIDLVDPLISESGFKMEIIR-----CVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
V++ V SG +M+ + + C Q +DRPN ++ + +D
Sbjct: 261 VLEFVT-----SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 312
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 112/297 (37%), Gaps = 94/297 (31%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKA-SGQGQEEFMNEVMVISN 547
N L LG G FG VY+G++ ++AVK L + S Q + +F+ E ++IS
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISK 104
Query: 548 LQHRNLVRLLGC------------------------------------------------ 559
H+N+VR +G
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 560 ---CVEREENMLIYEYM---------PNKSLDSFLFDFGLAR-IFGGNQDQAATKRLVGT 606
C EEN I+ + P + + DFG+AR I+ + + ++
Sbjct: 165 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666
+M PE MEG F+ K+D +SFGVLL EI F L + Y K ++
Sbjct: 225 -KWMPPEAFMEGIFTSKTDTWSFGVLLWEI-------------FSLGYMPYPSK--SNQE 268
Query: 667 VIDLVDPLISESGFKMEIIR-----CVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
V++ V SG +M+ + + C Q +DRPN ++ + +D
Sbjct: 269 VLEFVT-----SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 112/297 (37%), Gaps = 94/297 (31%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSK-ASGQGQEEFMNEVMVISN 547
N L LG G FG VY+G++ ++AVK L + S Q + +F+ E ++IS
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 548 LQHRNLVRLLGC------------------------------------------------ 559
H+N+VR +G
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 560 ---CVEREENMLIYEYM---------PNKSLDSFLFDFGLAR-IFGGNQDQAATKRLVGT 606
C EEN I+ + P + + DFG+AR I+ + + ++
Sbjct: 165 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666
+M PE MEG F+ K+D +SFGVLL EI F L + Y K ++
Sbjct: 225 -KWMPPEAFMEGIFTSKTDTWSFGVLLWEI-------------FSLGYMPYPSK--SNQE 268
Query: 667 VIDLVDPLISESGFKMEIIR-----CVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
V++ V SG +M+ + + C Q +DRPN ++ + +D
Sbjct: 269 VLEFVT-----SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 112/297 (37%), Gaps = 94/297 (31%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSK-ASGQGQEEFMNEVMVISN 547
N L LG G FG VY+G++ ++AVK L + S Q + +F+ E ++IS
Sbjct: 22 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 81
Query: 548 LQHRNLVRLLGC------------------------------------------------ 559
H+N+VR +G
Sbjct: 82 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 141
Query: 560 ---CVEREENMLIYEYM---------PNKSLDSFLFDFGLAR-IFGGNQDQAATKRLVGT 606
C EEN I+ + P + + DFG+AR I+ + + ++
Sbjct: 142 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 201
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666
+M PE MEG F+ K+D +SFGVLL EI F L + Y K ++
Sbjct: 202 -KWMPPEAFMEGIFTSKTDTWSFGVLLWEI-------------FSLGYMPYPSK--SNQE 245
Query: 667 VIDLVDPLISESGFKMEIIR-----CVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
V++ V SG +M+ + + C Q +DRPN ++ + +D
Sbjct: 246 VLEFVT-----SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 297
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 118/290 (40%), Gaps = 82/290 (28%)
Query: 497 FQLANKLGQGGFGPVYKGKLQ-DGQE---IAVKRLSKA-SGQGQEEFMNEVMVISNLQHR 551
++ +G G FG V G+L+ G+ +A+K L + + + +F++E ++ H
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLDSFL----------------------------- 582
N++ L G + + M+I EYM N SLD+FL
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 129
Query: 583 ----------------------FDFGLARIFGGNQDQAATKRLVGT-YGYMSPEYAMEGR 619
DFG++R+ + + A T R + +PE +
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 620 FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679
F+ SDV+S+G+++ E++S Y + + D + D++ + E G
Sbjct: 190 FTSASDVWSYGIVMWEVMS------------------YGERPYWDMSNQDVIKAI--EEG 229
Query: 680 FKME-----IIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQ 724
+++ I + L C Q+ DRP +V+ML+ I++ + K+
Sbjct: 230 YRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKR 279
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 112/297 (37%), Gaps = 94/297 (31%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSK-ASGQGQEEFMNEVMVISN 547
N L LG G FG VY+G++ ++AVK L + S Q + +F+ E ++IS
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 548 LQHRNLVRLLGC------------------------------------------------ 559
H+N+VR +G
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 560 ---CVEREENMLIYEYM---------PNKSLDSFLFDFGLAR-IFGGNQDQAATKRLVGT 606
C EEN I+ + P + + DFG+AR I+ + + ++
Sbjct: 150 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 209
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666
+M PE MEG F+ K+D +SFGVLL EI F L + Y K ++
Sbjct: 210 -KWMPPEAFMEGIFTSKTDTWSFGVLLWEI-------------FSLGYMPYPSK--SNQE 253
Query: 667 VIDLVDPLISESGFKMEIIR-----CVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
V++ V SG +M+ + + C Q +DRPN ++ + +D
Sbjct: 254 VLEFVT-----SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 118/290 (40%), Gaps = 82/290 (28%)
Query: 497 FQLANKLGQGGFGPVYKGKLQ-DGQE---IAVKRLSKA-SGQGQEEFMNEVMVISNLQHR 551
++ +G G FG V G+L+ G+ +A+K L + + + +F++E ++ H
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 75
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLDSFL----------------------------- 582
N++ L G + + M+I EYM N SLD+FL
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 135
Query: 583 ----------------------FDFGLARIFGGNQDQAATKRLVGT-YGYMSPEYAMEGR 619
DFG++R+ + + A T R + +PE +
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 620 FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679
F+ SDV+S+G+++ E++S Y + + D + D++ + E G
Sbjct: 196 FTSASDVWSYGIVMWEVMS------------------YGERPYWDMSNQDVIKAI--EEG 235
Query: 680 FKME-----IIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQ 724
+++ I + L C Q+ DRP +V+ML+ I++ + K+
Sbjct: 236 YRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKR 285
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 112/297 (37%), Gaps = 94/297 (31%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSK-ASGQGQEEFMNEVMVISN 547
N L LG G FG VY+G++ ++AVK L + S Q + +F+ E ++IS
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 548 LQHRNLVRLLGC------------------------------------------------ 559
H+N+VR +G
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 560 ---CVEREENMLIYEYM---------PNKSLDSFLFDFGLAR-IFGGNQDQAATKRLVGT 606
C EEN I+ + P + + DFG+AR I+ + + ++
Sbjct: 150 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 209
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666
+M PE MEG F+ K+D +SFGVLL EI F L + Y K ++
Sbjct: 210 -KWMPPEAFMEGIFTSKTDTWSFGVLLWEI-------------FSLGYMPYPSK--SNQE 253
Query: 667 VIDLVDPLISESGFKMEIIR-----CVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
V++ V SG +M+ + + C Q +DRPN ++ + +D
Sbjct: 254 VLEFVT-----SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 112/297 (37%), Gaps = 94/297 (31%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKA-SGQGQEEFMNEVMVISN 547
N L LG G FG VY+G++ ++AVK L + S Q + +F+ E ++IS
Sbjct: 47 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 106
Query: 548 LQHRNLVRLLGC------------------------------------------------ 559
H+N+VR +G
Sbjct: 107 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 166
Query: 560 ---CVEREENMLIYEYM---------PNKSLDSFLFDFGLAR-IFGGNQDQAATKRLVGT 606
C EEN I+ + P + + DFG+AR I+ + + ++
Sbjct: 167 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 226
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666
+M PE MEG F+ K+D +SFGVLL EI F L + Y K ++
Sbjct: 227 -KWMPPEAFMEGIFTSKTDTWSFGVLLWEI-------------FSLGYMPYPSK--SNQE 270
Query: 667 VIDLVDPLISESGFKMEIIR-----CVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
V++ V SG +M+ + + C Q +DRPN ++ + +D
Sbjct: 271 VLEFVT-----SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 322
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 109/298 (36%), Gaps = 96/298 (32%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKA-SGQGQEEFMNEVMVISN 547
N L LG G FG VY+G++ ++AVK L + S Q + +F+ E ++IS
Sbjct: 48 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 107
Query: 548 LQHRNLVRLLGC------------------------------------------------ 559
H+N+VR +G
Sbjct: 108 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 167
Query: 560 ---CVEREENMLIYEYM---------PNKSLDSFLFDFGLARIF--GGNQDQAATKRLVG 605
C EEN I+ + P + + DFG+AR G + L
Sbjct: 168 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML-- 225
Query: 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN 665
+M PE MEG F+ K+D +SFGVLL EI F L + Y K ++
Sbjct: 226 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI-------------FSLGYMPYPSK--SNQ 270
Query: 666 NVIDLVDPLISESGFKMEIIR-----CVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
V++ V SG +M+ + + C Q +DRPN ++ + +D
Sbjct: 271 EVLEFVT-----SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 323
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 109/298 (36%), Gaps = 96/298 (32%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKA-SGQGQEEFMNEVMVISN 547
N L LG G FG VY+G++ ++AVK L + S Q + +F+ E ++IS
Sbjct: 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130
Query: 548 LQHRNLVRLLGC------------------------------------------------ 559
H+N+VR +G
Sbjct: 131 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 190
Query: 560 ---CVEREENMLIYEYM---------PNKSLDSFLFDFGLARIF--GGNQDQAATKRLVG 605
C EEN I+ + P + + DFG+AR G + L
Sbjct: 191 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML-- 248
Query: 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN 665
+M PE MEG F+ K+D +SFGVLL EI F L + Y K ++
Sbjct: 249 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI-------------FSLGYMPYPSK--SNQ 293
Query: 666 NVIDLVDPLISESGFKMEIIR-----CVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
V++ V SG +M+ + + C Q +DRPN ++ + +D
Sbjct: 294 EVLEFVT-----SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 112/297 (37%), Gaps = 94/297 (31%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKA-SGQGQEEFMNEVMVISN 547
N L LG G FG VY+G++ ++AVK L + S Q + +F+ E ++IS
Sbjct: 57 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 116
Query: 548 LQHRNLVRLLGC------------------------------------------------ 559
H+N+VR +G
Sbjct: 117 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 176
Query: 560 ---CVEREENMLIYEYM---------PNKSLDSFLFDFGLAR-IFGGNQDQAATKRLVGT 606
C EEN I+ + P + + DFG+AR I+ + + ++
Sbjct: 177 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 236
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666
+M PE MEG F+ K+D +SFGVLL EI F L + Y K ++
Sbjct: 237 -KWMPPEAFMEGIFTSKTDTWSFGVLLWEI-------------FSLGYMPYPSK--SNQE 280
Query: 667 VIDLVDPLISESGFKMEIIR-----CVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
V++ V SG +M+ + + C Q +DRPN ++ + +D
Sbjct: 281 VLEFVT-----SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 332
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 499 LANKLGQGGFGPVYKGKL------QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRN 552
L +LG+G FG V+ + +D +AVK L + +++F E +++NLQH +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG 586
+V+ G C + + ++++EYM + L+ FL G
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHG 112
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFG++R + +M PE M +F+ +SDV+SFGV+L EI + K
Sbjct: 176 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
Query: 644 SF 645
F
Sbjct: 236 WF 237
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 459 RLDLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVY----KG 514
RL G YA+ VNP V+ +E A ++ +LGQG FG VY KG
Sbjct: 16 RLGNGVLYAS-----VNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKG 70
Query: 515 KLQDGQE--IAVKRLSKASGQGQE-EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571
++D E +A+K +++A+ + EF+NE V+ ++VRLLG + + ++I E
Sbjct: 71 VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 130
Query: 572 YMPNKSLDSFL 582
M L S+L
Sbjct: 131 LMTRGDLKSYL 141
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I+ + + K L+ +MSPE +G F+ SDV+SFGV+L EI +
Sbjct: 203 DFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 59/202 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGK---LQD--GQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
+ + +LG+G FG V + LQD G+ +AVK+L ++ + +F E+ ++ +LQH
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 551 RNLVRLLGCCVE--REENMLIYEYMPNKSLDSF--------------------------- 581
N+V+ G C R LI EY+P SL +
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRL-VGTYGYMSPEYAM 616
+ DFGL ++ +++ K + +PE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 617 EGRFSEKSDVFSFGVLLLEIVS 638
E +FS SDV+SFGV+L E+ +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 82/278 (29%)
Query: 503 LGQGGFGPVYKGKLQ-DGQE---IAVKRLSKASGQGQE-EFMNEVMVISNLQHRNLVRLL 557
+G G FG V G+L+ G+ +A+K L + Q +F+ E ++ H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 558 GCCVEREENMLIYEYMPNKSLDSFL----------------------------------- 582
G + + M++ EYM N SLD+FL
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRD 149
Query: 583 ----------------FDFGLARIFGGNQDQAATKRLVGT-YGYMSPEYAMEGRFSEKSD 625
DFGL+R+ + + A T R + +PE +F+ SD
Sbjct: 150 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASD 209
Query: 626 VFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM-EI 684
V+S+G+++ E+VS Y E W++ N +VI V E G+++
Sbjct: 210 VWSYGIVMWEVVS-------YGER-------PYWEMTN-QDVIKAV-----EEGYRLPSP 249
Query: 685 IRC----VNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
+ C + L C Q+ RP +V+ML+ I++
Sbjct: 250 MDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIRN 287
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 474 VNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVY----KGKLQDGQE--IAVKRL 527
VNP V+ +E A ++ +LGQG FG VY KG ++D E +A+K +
Sbjct: 4 VNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV 63
Query: 528 SKASGQGQE-EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
++A+ + EF+NE V+ ++VRLLG + + ++I E M L S+L
Sbjct: 64 NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I+ + + K L+ +MSPE +G F+ SDV+SFGV+L EI +
Sbjct: 181 DFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 67/206 (32%)
Query: 496 NFQLANKLGQGGFGPVYKGK---LQD--GQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
+ + +LG+G FG V + LQD G+ +AVK+L ++ + +F E+ ++ +LQH
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 69
Query: 551 RNLVRLLGCCVE--REENMLIYEYMPNKSLDSFL-------------------------- 582
N+V+ G C R LI EY+P SL +L
Sbjct: 70 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 129
Query: 583 -------FDFGLARIFGGNQDQAATKRLVGTYG-----------------------YMSP 612
D I N+++ +G +G + +P
Sbjct: 130 GTKRYIHRDLATRNILVENENRVK----IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 185
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E E +FS SDV+SFGV+L E+ +
Sbjct: 186 ESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 108/287 (37%), Gaps = 91/287 (31%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQE--EFMNEVMVISNLQHRNL 553
+ + K+G G FG V++ + G ++AVK L + + EF+ EV ++ L+H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 554 VRLLGCCV-------------------------------EREENMLIYEYM--------- 573
V +G ER + Y+
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 574 -----------PNKSLDSF----LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
PN +D + DFGL+R+ ++K GT +M+PE +
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF--LSSKSAAGTPEWMAPEVLRDE 214
Query: 619 RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678
+EKSDV+SFGV+L +EL L W N V+ V
Sbjct: 215 PSNEKSDVYSFGVIL----------------WELATLQQPWGNLNPAQVVAAV------- 251
Query: 679 GFK---MEIIRCVNVGLLCVQEFV-----KDRPNMPTVVSMLNSEIK 717
GFK +EI R +N + + E RP+ T++ +L IK
Sbjct: 252 GFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 474 VNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVY----KGKLQDGQE--IAVKRL 527
VNP V+ +E A ++ +LGQG FG VY KG ++D E +A+K +
Sbjct: 4 VNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV 63
Query: 528 SKASGQGQE-EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
++A+ + EF+NE V+ ++VRLLG + + ++I E M L S+L
Sbjct: 64 NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I+ + + K L+ +MSPE +G F+ SDV+SFGV+L EI +
Sbjct: 181 DFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 67/206 (32%)
Query: 496 NFQLANKLGQGGFGPVYKGK---LQD--GQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
+ + +LG+G FG V + LQD G+ +AVK+L ++ + +F E+ ++ +LQH
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 68
Query: 551 RNLVRLLGCCVE--REENMLIYEYMPNKSLDSFL-------------------------- 582
N+V+ G C R LI EY+P SL +L
Sbjct: 69 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 128
Query: 583 -------FDFGLARIFGGNQDQAATKRLVGTYG-----------------------YMSP 612
D I N+++ +G +G + +P
Sbjct: 129 GTKRYIHRDLATRNILVENENRVK----IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 184
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E E +FS SDV+SFGV+L E+ +
Sbjct: 185 ESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 67/206 (32%)
Query: 496 NFQLANKLGQGGFGPVYKGK---LQD--GQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
+ + +LG+G FG V + LQD G+ +AVK+L ++ + +F E+ ++ +LQH
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 551 RNLVRLLGCCVE--REENMLIYEYMPNKSLDSFL-------------------------- 582
N+V+ G C R LI EY+P SL +L
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 583 -------FDFGLARIFGGNQDQAATKRLVGTYG-----------------------YMSP 612
D I N+++ +G +G + +P
Sbjct: 131 GTKRYIHRDLATRNILVENENRVK----IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E E +FS SDV+SFGV+L E+ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 67/206 (32%)
Query: 496 NFQLANKLGQGGFGPVYKGK---LQD--GQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
+ + +LG+G FG V + LQD G+ +AVK+L ++ + +F E+ ++ +LQH
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 551 RNLVRLLGCCVE--REENMLIYEYMPNKSLDSFL-------------------------- 582
N+V+ G C R LI EY+P SL +L
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 583 -------FDFGLARIFGGNQDQAATKRLVGTYG-----------------------YMSP 612
D I N+++ +G +G + +P
Sbjct: 134 GTKRYIHRDLATRNILVENENRVK----IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E E +FS SDV+SFGV+L E+ +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 101/250 (40%), Gaps = 86/250 (34%)
Query: 460 LDLGEAYANFSTEKVNPARLQDL---------LVFNFEELANATNNFQLANKLGQGGFGP 510
L +G + +NP +Q + L+ +F E+ +G+G FG
Sbjct: 3 LHMGSNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEV------------IGRGHFGC 50
Query: 511 VYKGKL--QDGQEI--AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLLGCCVERE- 564
VY G L DG++I AVK L++ + G+ +F+ E +++ + H N++ LLG C+ E
Sbjct: 51 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 110
Query: 565 ENMLIYEYMPNKSLDSFL------------------------------------------ 582
+++ YM + L +F+
Sbjct: 111 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCM 170
Query: 583 ---------FDFGLAR-----IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFS 628
DFGLAR F ++ K V +M+ E +F+ KSDV+S
Sbjct: 171 LDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV---KWMALESLQTQKFTTKSDVWS 227
Query: 629 FGVLLLEIVS 638
FGVLL E+++
Sbjct: 228 FGVLLWELMT 237
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 103/250 (41%), Gaps = 72/250 (28%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKL--QDGQ--EIAVK--RLSKASGQGQEEFM 539
E++ N L LG+G FG V +G L +DG ++AVK +L +S + EEF+
Sbjct: 25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFL 84
Query: 540 NEVMVISNLQHRNLVRLLGCCVEREEN-----MLIYEYM--------------------- 573
+E + + H N++RLLG C+E M+I +M
Sbjct: 85 SEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHI 144
Query: 574 PNKSLDSFLFDFGLARIFGGN-----QDQAATKRL--------VGTYGY----MSPEYAM 616
P ++L F+ D L + N +D AA + V +G S +Y
Sbjct: 145 PLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYR 204
Query: 617 EGR------------------FSEKSDVFSFGVLLLEIVSGRKNTSFY----HEEFELTL 654
+GR ++ KSDV++FGV + EI + R T + HE ++ L
Sbjct: 205 QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT-RGMTPYPGVQNHEMYDYLL 263
Query: 655 LGYAWKLWND 664
G+ K D
Sbjct: 264 HGHRLKQPED 273
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 67/206 (32%)
Query: 496 NFQLANKLGQGGFGPVYKGK---LQD--GQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
+ + +LG+G FG V + LQD G+ +AVK+L ++ + +F E+ ++ +LQH
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 551 RNLVRLLGCCVE--REENMLIYEYMPNKSLDSFL-------------------------- 582
N+V+ G C R LI EY+P SL +L
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 583 -------FDFGLARIFGGNQDQAATKRLVGTYG-----------------------YMSP 612
D I N+++ +G +G + +P
Sbjct: 131 GTKRYIHRDLATRNILVENENRVK----IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E E +FS SDV+SFGV+L E+ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 67/206 (32%)
Query: 496 NFQLANKLGQGGFGPVYKGK---LQD--GQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
+ + +LG+G FG V + LQD G+ +AVK+L ++ + +F E+ ++ +LQH
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 74
Query: 551 RNLVRLLGCCVE--REENMLIYEYMPNKSLDSFL-------------------------- 582
N+V+ G C R LI EY+P SL +L
Sbjct: 75 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 134
Query: 583 -------FDFGLARIFGGNQDQAATKRLVGTYG-----------------------YMSP 612
D I N+++ +G +G + +P
Sbjct: 135 GTKRYIHRDLATRNILVENENRVK----IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 190
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E E +FS SDV+SFGV+L E+ +
Sbjct: 191 ESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 60/212 (28%)
Query: 480 QDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA-SGQGQEE 537
+D V N E+L L ++G+G FG V+ G+L+ D +AVK + + +
Sbjct: 106 KDKWVLNHEDLV-------LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK 158
Query: 538 FMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG-------LARI 590
F+ E ++ H N+VRL+G C +++ ++ E + +FL G L ++
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQM 218
Query: 591 FGG--------------NQDQAATKRLV-------------------GTYG--------- 608
G ++D AA LV G Y
Sbjct: 219 VGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVP 278
Query: 609 --YMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ +PE GR+S +SDV+SFG+LL E S
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 112/291 (38%), Gaps = 92/291 (31%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQE---IAVKRLSKASGQGQE-EFMNEVMVISNL 548
+ + +G G G V G+L+ GQ +A+K L + Q +F++E ++
Sbjct: 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------- 582
H N++RL G M++ EYM N SLD+FL
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 583 -------------------------FDFGLARIFGGNQDQAATKRLVGTYG------YMS 611
DFGL+R+ + D A T T G + +
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT-----TTGGKIPIRWTA 222
Query: 612 PEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLV 671
PE FS SDV+SFGV++ E+++ Y E WN N D++
Sbjct: 223 PEAIAFRTFSSASDVWSFGVVMWEVLA-------YGER----------PYWNMTNR-DVI 264
Query: 672 DPLISESGFKMEI-IRCVN----VGLLCVQEFVKDRPNMPTVVSMLNSEIK 717
+ E G+++ + C + + L C + RP +VS+L++ I+
Sbjct: 265 SSV--EEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIR 313
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 65/198 (32%)
Query: 503 LGQGGFGPVYKGKL--QDGQEI--AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G+G FG VY G L DG++I AVK L++ + G+ +F+ E +++ + H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 558 GCCVERE-ENMLIYEYMPNKSLDSFL---------------------------------- 582
G C+ E +++ YM + L +F+
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 155
Query: 583 -----------------FDFGLAR-----IFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
DFGLAR F ++ K V +M+ E +F
Sbjct: 156 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV---KWMALESLQTQKF 212
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFGVLL E+++
Sbjct: 213 TTKSDVWSFGVLLWELMT 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 65/198 (32%)
Query: 503 LGQGGFGPVYKGKL--QDGQEI--AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G+G FG VY G L DG++I AVK L++ + G+ +F+ E +++ + H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 558 GCCVEREEN-MLIYEYMPNKSLDSFL---------------------------------- 582
G C+ E + +++ YM + L +F+
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 158
Query: 583 -----------------FDFGLAR-----IFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
DFGLAR F ++ K V +M+ E +F
Sbjct: 159 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV---KWMALESLQTQKF 215
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFGVLL E+++
Sbjct: 216 TTKSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 65/198 (32%)
Query: 503 LGQGGFGPVYKGKL--QDGQEI--AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G+G FG VY G L DG++I AVK L++ + G+ +F+ E +++ + H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 558 GCCVERE-ENMLIYEYMPNKSLDSFL---------------------------------- 582
G C+ E +++ YM + L +F+
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 157
Query: 583 -----------------FDFGLAR-----IFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
DFGLAR F ++ K V +M+ E +F
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV---KWMALESLQTQKF 214
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFGVLL E+++
Sbjct: 215 TTKSDVWSFGVLLWELMT 232
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 65/198 (32%)
Query: 503 LGQGGFGPVYKGKL--QDGQEI--AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G+G FG VY G L DG++I AVK L++ + G+ +F+ E +++ + H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 558 GCCVEREEN-MLIYEYMPNKSLDSFL---------------------------------- 582
G C+ E + +++ YM + L +F+
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 158
Query: 583 -----------------FDFGLAR-----IFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
DFGLAR F ++ K V +M+ E +F
Sbjct: 159 DLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPV---KWMALESLQTQKF 215
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFGVLL E+++
Sbjct: 216 TTKSDVWSFGVLLWELMT 233
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 65/198 (32%)
Query: 503 LGQGGFGPVYKGKL--QDGQEI--AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G+G FG VY G L DG++I AVK L++ + G+ +F+ E +++ + H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 558 GCCVERE-ENMLIYEYMPNKSLDSFL---------------------------------- 582
G C+ E +++ YM + L +F+
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 157
Query: 583 -----------------FDFGLAR-----IFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
DFGLAR F ++ K V +M+ E +F
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV---KWMALESLQTQKF 214
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFGVLL E+++
Sbjct: 215 TTKSDVWSFGVLLWELMT 232
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 107/287 (37%), Gaps = 91/287 (31%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQE--EFMNEVMVISNLQHRNL 553
+ + K+G G FG V++ + G ++AVK L + + EF+ EV ++ L+H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 554 VRLLGCCV-------------------------------EREENMLIYEYM--------- 573
V +G ER + Y+
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 574 -----------PNKSLDSF----LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
PN +D + DFGL+R+ +K GT +M+PE +
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXF--LXSKXAAGTPEWMAPEVLRDE 214
Query: 619 RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678
+EKSDV+SFGV+L +EL L W N V+ V
Sbjct: 215 PSNEKSDVYSFGVIL----------------WELATLQQPWGNLNPAQVVAAV------- 251
Query: 679 GFK---MEIIRCVNVGLLCVQEFV-----KDRPNMPTVVSMLNSEIK 717
GFK +EI R +N + + E RP+ T++ +L IK
Sbjct: 252 GFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 452 KENSKVQ-RLDLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGP 510
K+ K Q R + E+Y S ++P +L +N E+ NN Q LG G FG
Sbjct: 7 KQKPKYQVRWKIIESYEGNSYTFIDPTQLP----YN-EKWEFPRNNLQFGKTLGAGAFGK 61
Query: 511 VYK------GKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVE 562
V + GK ++AVK L S A +E M+E+ ++S+L QH N+V LLG C
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121
Query: 563 REENMLIYEYMPNKSLDSFL 582
++I EY L +FL
Sbjct: 122 GGPVLVITEYCCYGDLLNFL 141
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + + +M+PE + ++ +SDV+S+G+LL EI S
Sbjct: 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 452 KENSKVQ-RLDLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGP 510
K+ K Q R + E+Y S ++P +L +N E+ NN Q LG G FG
Sbjct: 7 KQKPKYQVRWKIIESYEGNSYTFIDPTQLP----YN-EKWEFPRNNLQFGKTLGAGAFGK 61
Query: 511 VYK------GKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVE 562
V + GK ++AVK L S A +E M+E+ ++S+L QH N+V LLG C
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121
Query: 563 REENMLIYEYMPNKSLDSFL 582
++I EY L +FL
Sbjct: 122 GGPVLVITEYCCYGDLLNFL 141
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + + +M+PE + ++ +SDV+S+G+LL EI S
Sbjct: 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 65/198 (32%)
Query: 503 LGQGGFGPVYKGKL--QDGQEI--AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G+G FG VY G L DG++I AVK L++ + G+ +F+ E +++ + H N++ LL
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 558 GCCVERE-ENMLIYEYMPNKSLDSFL---------------------------------- 582
G C+ E +++ YM + L +F+
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 216
Query: 583 -----------------FDFGLAR-----IFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
DFGLAR F ++ K V +M+ E +F
Sbjct: 217 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV---KWMALESLQTQKF 273
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFGVLL E+++
Sbjct: 274 TTKSDVWSFGVLLWELMT 291
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVY----KGKLQDGQE--IAVKRLSKASGQGQE- 536
VF +E A ++ +LGQG FG VY KG ++D E +A+K +++A+ +
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 537 EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
EF+NE V+ ++VRLLG + + ++I E M L S+L
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 110
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I+ + + K L+ +MSPE +G F+ SDV+SFGV+L EI +
Sbjct: 172 DFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 113/284 (39%), Gaps = 85/284 (29%)
Query: 503 LGQGGFGPVYKGKLQ-DGQE---IAVKRLSKASGQGQE-EFMNEVMVISNLQHRNLVRLL 557
+G G FG V +G+L+ G++ +A+K L + Q EF++E ++ +H N++RL
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 558 GCCVEREENMLIYEYMPNKSLDSFL----------------------------------- 582
G M++ E+M N +LDSFL
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRD 143
Query: 583 ----------------FDFGLARIFGGN-QDQAATKRLVGTYG--YMSPEYAMEGRFSEK 623
DFGL+R N D T L G + +PE +F+
Sbjct: 144 LAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSA 203
Query: 624 SDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD-----PLISES 678
SD +S+G+++ E++ SF + W + N +VI+ ++ P +
Sbjct: 204 SDAWSYGIVMWEVM------SFGERPY--------WDMSN-QDVINAIEQDYRLPPPPDC 248
Query: 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAA 722
+ + L C Q+ RP P VVS L+ I++ PA+
Sbjct: 249 PTSLH-----QLMLDCWQKDRNARPRFPQVVSALDKMIRN-PAS 286
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 117/303 (38%), Gaps = 93/303 (30%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQE---IAVKRLSKASGQGQE-EFMNEVMVISNL 548
+ + +G G G V G+L+ GQ +A+K L + Q +F++E ++
Sbjct: 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------- 582
H N++RL G M++ EYM N SLD+FL
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 583 -------------------------FDFGLARIFGGNQDQAATKRLVGTYG------YMS 611
DFGL+R+ + D A T T G + +
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT-----TTGGKIPIRWTA 222
Query: 612 PEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLV 671
PE FS SDV+SFGV++ E+++ Y E WN N D++
Sbjct: 223 PEAIAFRTFSSASDVWSFGVVMWEVLA-------YGER----------PYWNMTNR-DVI 264
Query: 672 DPLISESGFKMEI-IRCVN----VGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPA 726
+ E G+++ + C + + L C + RP +VS+L++ I+ P + +
Sbjct: 265 SSV--EEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS-PESLRAT 321
Query: 727 FTV 729
TV
Sbjct: 322 ATV 324
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 115/289 (39%), Gaps = 85/289 (29%)
Query: 498 QLANKLGQGGFGPVYKGKLQ-DGQE---IAVKRLSKASGQGQE-EFMNEVMVISNLQHRN 552
++ +G G FG V +G+L+ G++ +A+K L + Q EF++E ++ +H N
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 76
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFL------------------------------ 582
++RL G M++ E+M N +LDSFL
Sbjct: 77 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMS 136
Query: 583 ---------------------FDFGLARIFGGN-QDQAATKRLVGTYG--YMSPEYAMEG 618
DFGL+R N D T L G + +PE
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFR 196
Query: 619 RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD-----P 673
+F+ SD +S+G+++ E++ SF + W + N +VI+ ++ P
Sbjct: 197 KFTSASDAWSYGIVMWEVM------SFGERPY--------WDMSN-QDVINAIEQDYRLP 241
Query: 674 LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAA 722
+ + + L C Q+ RP P VVS L+ I++ PA+
Sbjct: 242 PPPDCPTSLH-----QLMLDCWQKDRNARPRFPQVVSALDKMIRN-PAS 284
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 59/195 (30%)
Query: 503 LGQGGFGPVYKGKL--QDGQEI--AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G+G FG VY G L DG++I AVK L++ + G+ +F+ E +++ + H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 558 GCCVERE-ENMLIYEYMPNKSLDSFL---------------------------------- 582
G C+ E +++ YM + L +F+
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 156
Query: 583 -----------------FDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRFSEK 623
DFGLAR + + + +M+ E +F+ K
Sbjct: 157 DLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTK 216
Query: 624 SDVFSFGVLLLEIVS 638
SDV+SFGVLL E+++
Sbjct: 217 SDVWSFGVLLWELMT 231
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 452 KENSKVQ-RLDLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGP 510
K+ K Q R + E+Y S ++P +L +N E+ NN Q LG G FG
Sbjct: 7 KQKPKYQVRWKIIESYEGNSYTFIDPTQLP----YN-EKWEFPRNNLQFGKTLGAGAFGK 61
Query: 511 VYK------GKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVE 562
V + GK ++AVK L S A +E M+E+ ++S+L QH N+V LLG C
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121
Query: 563 REENMLIYEYMPNKSLDSFL 582
++I EY L +FL
Sbjct: 122 GGPVLVITEYCCYGDLLNFL 141
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + + +M+PE + ++ +SDV+S+G+LL EI S
Sbjct: 203 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 452 KENSKVQ-RLDLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGP 510
K+ K Q R + E+Y S ++P +L +N E+ NN Q LG G FG
Sbjct: 7 KQKPKYQVRWKIIESYEGNSYTFIDPTQLP----YN-EKWEFPRNNLQFGKTLGAGAFGK 61
Query: 511 VYK------GKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVE 562
V + GK ++AVK L S A +E M+E+ ++S+L QH N+V LLG C
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121
Query: 563 REENMLIYEYMPNKSLDSFL 582
++I EY L +FL
Sbjct: 122 GGPVLVITEYCCYGDLLNFL 141
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + + +M+PE + ++ +SDV+S+G+LL EI S
Sbjct: 209 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 85/222 (38%), Gaps = 68/222 (30%)
Query: 485 FNFEELANATNNF---------QLANKLGQGGFGPVYKG--KLQDGQEI--AVKRLSKAS 531
F FE+ A F ++ +G G FG V G KL +EI A+K L
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 532 GQGQE-EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL-------- 582
+ Q +F++E ++ H N++ L G + M+I E+M N SLDSFL
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 583 -------------------------------------------FDFGLARIFGGN-QDQA 598
DFGL+R + D
Sbjct: 134 VIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 193
Query: 599 ATKRLVGTYG--YMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
T L G + +PE +F+ SDV+S+G+++ E++S
Sbjct: 194 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 67/206 (32%)
Query: 496 NFQLANKLGQGGFGPVYKGK---LQD--GQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
+ + +LG+G FG V + LQD G+ +AVK+L ++ + +F E+ ++ +LQH
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 551 RNLVRLLGCCVE--REENMLIYEYMPNKSLDSFL-------------------------- 582
N+V+ G C R LI E++P SL +L
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 583 -------FDFGLARIFGGNQDQAATKRLVGTYG-----------------------YMSP 612
D I N+++ +G +G + +P
Sbjct: 134 GTKRYIHRDLATRNILVENENRVK----IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E E +FS SDV+SFGV+L E+ +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 59/195 (30%)
Query: 503 LGQGGFGPVYKGKL--QDGQEI--AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G+G FG VY G L DG++I AVK L++ + G+ +F+ E +++ + H N++ LL
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 558 GCCVERE-ENMLIYEYMPNKSLDSF------------LFDFGLARIFGG---------NQ 595
G C+ E +++ YM + L +F L FGL G ++
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 176
Query: 596 DQAATKRL--------VGTYG------------------------YMSPEYAMEGRFSEK 623
D AA + V +G +M+ E +F+ K
Sbjct: 177 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 236
Query: 624 SDVFSFGVLLLEIVS 638
SDV+SFGVLL E+++
Sbjct: 237 SDVWSFGVLLWELMT 251
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 59/195 (30%)
Query: 503 LGQGGFGPVYKGKL--QDGQEI--AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G+G FG VY G L DG++I AVK L++ + G+ +F+ E +++ + H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 558 GCCVERE-ENMLIYEYMPNKSLDSF------------LFDFGLARIFGG---------NQ 595
G C+ E +++ YM + L +F L FGL G ++
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 157
Query: 596 DQAATKRL--------VGTYG------------------------YMSPEYAMEGRFSEK 623
D AA + V +G +M+ E +F+ K
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 624 SDVFSFGVLLLEIVS 638
SDV+SFGVLL E+++
Sbjct: 218 SDVWSFGVLLWELMT 232
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 59/195 (30%)
Query: 503 LGQGGFGPVYKGKL--QDGQEI--AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G+G FG VY G L DG++I AVK L++ + G+ +F+ E +++ + H N++ LL
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 558 GCCVERE-ENMLIYEYMPNKSLDSF------------LFDFGLARIFGG---------NQ 595
G C+ E +++ YM + L +F L FGL G ++
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 152
Query: 596 DQAATKRL--------VGTYG------------------------YMSPEYAMEGRFSEK 623
D AA + V +G +M+ E +F+ K
Sbjct: 153 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 212
Query: 624 SDVFSFGVLLLEIVS 638
SDV+SFGVLL E+++
Sbjct: 213 SDVWSFGVLLWELMT 227
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 59/195 (30%)
Query: 503 LGQGGFGPVYKGKL--QDGQEI--AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G+G FG VY G L DG++I AVK L++ + G+ +F+ E +++ + H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 558 GCCVERE-ENMLIYEYMPNKSLDSF------------LFDFGLARIFGG---------NQ 595
G C+ E +++ YM + L +F L FGL G ++
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 157
Query: 596 DQAATKRL--------VGTYG------------------------YMSPEYAMEGRFSEK 623
D AA + V +G +M+ E +F+ K
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 624 SDVFSFGVLLLEIVS 638
SDV+SFGVLL E+++
Sbjct: 218 SDVWSFGVLLWELMT 232
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 59/195 (30%)
Query: 503 LGQGGFGPVYKGKL--QDGQEI--AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G+G FG VY G L DG++I AVK L++ + G+ +F+ E +++ + H N++ LL
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 558 GCCVERE-ENMLIYEYMPNKSLDSF------------LFDFGLARIFGG---------NQ 595
G C+ E +++ YM + L +F L FGL G ++
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 149
Query: 596 DQAATKRL--------VGTYG------------------------YMSPEYAMEGRFSEK 623
D AA + V +G +M+ E +F+ K
Sbjct: 150 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 209
Query: 624 SDVFSFGVLLLEIVS 638
SDV+SFGVLL E+++
Sbjct: 210 SDVWSFGVLLWELMT 224
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 59/195 (30%)
Query: 503 LGQGGFGPVYKGKL--QDGQEI--AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G+G FG VY G L DG++I AVK L++ + G+ +F+ E +++ + H N++ LL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 558 GCCVERE-ENMLIYEYMPNKSLDSF------------LFDFGLARIFGG---------NQ 595
G C+ E +++ YM + L +F L FGL G ++
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 175
Query: 596 DQAATKRL--------VGTYG------------------------YMSPEYAMEGRFSEK 623
D AA + V +G +M+ E +F+ K
Sbjct: 176 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 235
Query: 624 SDVFSFGVLLLEIVS 638
SDV+SFGVLL E+++
Sbjct: 236 SDVWSFGVLLWELMT 250
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 59/195 (30%)
Query: 503 LGQGGFGPVYKGKL--QDGQEI--AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G+G FG VY G L DG++I AVK L++ + G+ +F+ E +++ + H N++ LL
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 558 GCCVERE-ENMLIYEYMPNKSLDSF------------LFDFGLARIFGG---------NQ 595
G C+ E +++ YM + L +F L FGL G ++
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 154
Query: 596 DQAATKRL--------VGTYG------------------------YMSPEYAMEGRFSEK 623
D AA + V +G +M+ E +F+ K
Sbjct: 155 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 214
Query: 624 SDVFSFGVLLLEIVS 638
SDV+SFGVLL E+++
Sbjct: 215 SDVWSFGVLLWELMT 229
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 59/195 (30%)
Query: 503 LGQGGFGPVYKGKL--QDGQEI--AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G+G FG VY G L DG++I AVK L++ + G+ +F+ E +++ + H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 558 GCCVERE-ENMLIYEYMPNKSLDSF------------LFDFGLARIFGG---------NQ 595
G C+ E +++ YM + L +F L FGL G ++
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 156
Query: 596 DQAATKRL--------VGTYG------------------------YMSPEYAMEGRFSEK 623
D AA + V +G +M+ E +F+ K
Sbjct: 157 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 216
Query: 624 SDVFSFGVLLLEIVS 638
SDV+SFGVLL E+++
Sbjct: 217 SDVWSFGVLLWELMT 231
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 59/195 (30%)
Query: 503 LGQGGFGPVYKGKL--QDGQEI--AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G+G FG VY G L DG++I AVK L++ + G+ +F+ E +++ + H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 558 GCCVERE-ENMLIYEYMPNKSLDSF------------LFDFGLARIFGG---------NQ 595
G C+ E +++ YM + L +F L FGL G ++
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 155
Query: 596 DQAATKRL--------VGTYG------------------------YMSPEYAMEGRFSEK 623
D AA + V +G +M+ E +F+ K
Sbjct: 156 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 215
Query: 624 SDVFSFGVLLLEIVS 638
SDV+SFGVLL E+++
Sbjct: 216 SDVWSFGVLLWELMT 230
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 459 RLDLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYK----- 513
R + E+Y S ++P +L +N E+ NN Q LG G FG V +
Sbjct: 7 RWKIIESYEGNSYTFIDPTQLP----YN-EKWEFPRNNLQFGKTLGAGAFGKVVEATAFG 61
Query: 514 -GKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIY 570
GK ++AVK L S A +E M+E+ ++S+L QH N+V LLG C ++I
Sbjct: 62 LGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVIT 121
Query: 571 EYMPNKSLDSFL 582
EY L +FL
Sbjct: 122 EYCCYGDLLNFL 133
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + + +M+PE + ++ +SDV+S+G+LL EI S
Sbjct: 195 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 60/212 (28%)
Query: 480 QDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA-SGQGQEE 537
+D V N E+L L ++G+G FG V+ G+L+ D +AVK + + +
Sbjct: 106 KDKWVLNHEDLV-------LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK 158
Query: 538 FMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL--------------- 582
F+ E ++ H N+VRL+G C +++ ++ E + +FL
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQM 218
Query: 583 ------------------------------------FDFGLARIFGGNQDQAATKRLVGT 606
DFG++R A+
Sbjct: 219 VGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVP 278
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ +PE GR+S +SDV+SFG+LL E S
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 56/211 (26%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSK-ASGQGQEEFMNEVMVISN 547
A + L LG+G FG VY+G + + +AVK K + +E+FM+E +++ N
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPN--------------KSLDSFLFDFGLARIFG- 592
L H ++V+L+G +E E +I E P K L L+ + +
Sbjct: 66 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAY 124
Query: 593 ------GNQDQAATKRLV--------GTYG---------------------YMSPEYAME 617
++D A LV G +G +MSPE
Sbjct: 125 LESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 184
Query: 618 GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHE 648
RF+ SDV+ F V + EI+S K F+ E
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQPFFWLE 215
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVY----KGKLQDGQE--IAVKRLSKASGQGQE- 536
V+ +E A ++ +LGQG FG VY KG ++D E +A+K +++A+ +
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 537 EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
EF+NE V+ ++VRLLG + + ++I E M L S+L
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 109
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I+ + + K L+ +MSPE +G F+ SDV+SFGV+L EI +
Sbjct: 171 DFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 495 NNFQLANKLGQGGFGPVYKGK------LQDGQEIAVKRL-SKASGQGQEEFMNEVMVISN 547
NN + +G+G FG V++ + + +AVK L +AS Q +F E +++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTY 607
+ N+V+LLG C + L++EYM L+ FL + + +T+ V +
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 608 G 608
G
Sbjct: 167 G 167
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGL+R I+ + +A + +M PE R++ +SDV+++GV+L EI S
Sbjct: 217 DFGLSRNIYSADYYKADGNDAIPI-RWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVY----KGKLQDGQE--IAVKRLSKASGQGQE- 536
V+ +E A ++ +LGQG FG VY KG ++D E +A+K +++A+ +
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 537 EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
EF+NE V+ ++VRLLG + + ++I E M L S+L
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 113
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I + + K L+ +MSPE +G F+ SDV+SFGV+L EI +
Sbjct: 175 DFGMTRDIXETDXXRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 80/205 (39%), Gaps = 65/205 (31%)
Query: 503 LGQGGFGPVYKGKLQDGQEIAV-KRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCV 561
LG+G FG K ++ E+ V K L + + Q F+ EV V+ L+H N+++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 562 EREENMLIYEYMPN-------KSLDS---------------------------------- 580
+ + I EY+ KS+DS
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSH 137
Query: 581 ----------FLFDFGLARIFGGNQDQAATKR------------LVGTYGYMSPEYAMEG 618
+ DFGLAR+ + Q R +VG +M+PE
Sbjct: 138 NCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGR 197
Query: 619 RFSEKSDVFSFGVLLLEIVSGRKNT 643
+ EK DVFSFG++L EI+ GR N
Sbjct: 198 SYDEKVDVFSFGIVLCEII-GRVNA 221
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVY----KGKLQDGQE--IAVKRLSKASGQGQE- 536
V+ +E A ++ +LGQG FG VY KG ++D E +A+K +++A+ +
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 537 EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
EF+NE V+ ++VRLLG + + ++I E M L S+L
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 112
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I+ + + K L+ +MSPE +G F+ SDV+SFGV+L EI +
Sbjct: 174 DFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVY----KGKLQDGQE--IAVKRLSKASGQGQE- 536
V+ +E A ++ +LGQG FG VY KG ++D E +A+K +++A+ +
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 537 EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
EF+NE V+ ++VRLLG + + ++I E M L S+L
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 113
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I+ + + K L+ +MSPE +G F+ SDV+SFGV+L EI +
Sbjct: 175 DFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVY----KGKLQDGQE--IAVKRLSKASGQGQE- 536
V+ +E A ++ +LGQG FG VY KG ++D E +A+K +++A+ +
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 537 EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
EF+NE V+ ++VRLLG + + ++I E M L S+L
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 112
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I+ + + K L+ +MSPE +G F+ SDV+SFGV+L EI +
Sbjct: 174 DFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVY----KGKLQDGQE--IAVKRLSKASGQGQE- 536
V+ +E A ++ +LGQG FG VY KG ++D E +A+K +++A+ +
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 537 EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
EF+NE V+ ++VRLLG + + ++I E M L S+L
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 106
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I+ + + K L+ +MSPE +G F+ SDV+SFGV+L EI +
Sbjct: 168 DFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 56/211 (26%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSK-ASGQGQEEFMNEVMVISN 547
A + L LG+G FG VY+G + + +AVK K + +E+FM+E +++ N
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPN--------------KSLDSFLFDFGLARIFG- 592
L H ++V+L+G +E E +I E P K L L+ + +
Sbjct: 82 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAY 140
Query: 593 ------GNQDQAATKRLV--------GTYG---------------------YMSPEYAME 617
++D A LV G +G +MSPE
Sbjct: 141 LESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 200
Query: 618 GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHE 648
RF+ SDV+ F V + EI+S K F+ E
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQPFFWLE 231
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 56/211 (26%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSK-ASGQGQEEFMNEVMVISN 547
A + L LG+G FG VY+G + + +AVK K + +E+FM+E +++ N
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPN--------------KSLDSFLFDFGLARIFG- 592
L H ++V+L+G +E E +I E P K L L+ + +
Sbjct: 70 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAY 128
Query: 593 ------GNQDQAATKRLV--------GTYG---------------------YMSPEYAME 617
++D A LV G +G +MSPE
Sbjct: 129 LESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 188
Query: 618 GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHE 648
RF+ SDV+ F V + EI+S K F+ E
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQPFFWLE 219
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 503 LGQGGFGPVYKGKLQD----GQ----EIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
LGQG F ++KG ++ GQ E+ +K L KA E F ++S L H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL 582
G CV +EN+L+ E++ SLD++L
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYL 103
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Query: 464 EAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYK------GKLQ 517
E+Y S ++P +L +N E+ NN Q LG G FG V + GK
Sbjct: 5 ESYEGNSYTFIDPTQLP----YN-EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKED 59
Query: 518 DGQEIAVKRL-SKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYEYMPN 575
++AVK L S A +E M+E+ ++S+L QH N+V LLG C ++I EY
Sbjct: 60 AVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 119
Query: 576 KSLDSFL 582
L +FL
Sbjct: 120 GDLLNFL 126
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + + +M+PE + ++ +SDV+S+G+LL EI S
Sbjct: 201 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 493 ATNNFQLANKLGQGGFGPVY----KGKLQDGQE--IAVKRLSKASGQGQE-EFMNEVMVI 545
A ++ +LGQG FG VY KG ++D E +A+K +++A+ + EF+NE V+
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
++VRLLG + + ++I E M L S+L
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 104
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I + + K L+ +MSPE +G F+ SDV+SFGV+L EI +
Sbjct: 166 DFGMTRDIXETDXXRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 493 ATNNFQLANKLGQGGFGPVY----KGKLQDGQE--IAVKRLSKASGQGQE-EFMNEVMVI 545
A ++ +LGQG FG VY KG ++D E +A+K +++A+ + EF+NE V+
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
++VRLLG + + ++I E M L S+L
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 106
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I+ + + K L+ +MSPE +G F+ SDV+SFGV+L EI +
Sbjct: 168 DFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGKLQD------GQEIAVKRLSK-ASGQGQE 536
VF +E + L +LGQG FG VY+G +D +AVK +++ AS + +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 537 EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
EF+NE V+ ++VRLLG + + +++ E M + L S+L
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I+ + K L+ +M+PE +G F+ SD++SFGV+L EI S
Sbjct: 173 DFGMTRDIYETAYYRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGKLQD------GQEIAVKRLSK-ASGQGQE 536
VF +E + L +LGQG FG VY+G +D +AVK +++ AS + +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 537 EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
EF+NE V+ ++VRLLG + + +++ E M + L S+L
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I+ + + K L+ +M+PE +G F+ SD++SFGV+L EI S
Sbjct: 173 DFGMTRDIYETDYYRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGKLQD------GQEIAVKRLSK-ASGQGQE 536
VF +E + L +LGQG FG VY+G +D +AVK +++ AS + +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 537 EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
EF+NE V+ ++VRLLG + + +++ E M + L S+L
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I + + K L+ +M+PE +G F+ SD++SFGV+L EI S
Sbjct: 173 DFGMTRDIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGKLQD------GQEIAVKRLSK-ASGQGQE 536
VF +E + L +LGQG FG VY+G +D +AVK +++ AS + +
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 537 EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
EF+NE V+ ++VRLLG + + +++ E M + L S+L
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 108
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I + + K L+ +M+PE +G F+ SD++SFGV+L EI S
Sbjct: 170 DFGMTRDIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 79/200 (39%), Gaps = 59/200 (29%)
Query: 498 QLANKLGQGGFGPVYKG--KLQDGQEI--AVKRLSKASGQGQE-EFMNEVMVISNLQHRN 552
++ +G G FG V G KL +EI A+K L + Q +F++E ++ H N
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFL------------------------------ 582
++ L G + M+I E+M N SLDSFL
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN 129
Query: 583 ---------------------FDFGLARIFGGN-QDQAATKRLVGTYG--YMSPEYAMEG 618
DFGL+R + D T L G + +PE
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 189
Query: 619 RFSEKSDVFSFGVLLLEIVS 638
+F+ SDV+S+G+++ E++S
Sbjct: 190 KFTSASDVWSYGIVMWEVMS 209
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DG--QEIAVKRLSK-ASGQGQEEFMNEVMVISNL-Q 549
N+ + + +G+G FG V K +++ DG + A+KR+ + AS +F E+ V+ L
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H N++ LLG C R L EY P+ +L FL
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 107
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYG--YMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGL+R + K+ +G +M+ E ++ SDV+S+GVLL EIVS
Sbjct: 175 DFGLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 444 WFAKRKAMKENSKVQRLDLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKL 503
W A+K D+ + N E A L+ + + N L +
Sbjct: 28 WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEF 87
Query: 504 GQGGFGPVYKGKLQDGQEIAVKRLSKASGQ---GQEEFMNEVMVISNLQHRNLVRLLGCC 560
+GG P+ ++ G+ I L + Q G +E +V + HR+L
Sbjct: 88 ARGG--PL--NRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIV--PIIHRDL------- 134
Query: 561 VEREENMLIYEYMPNKSLDSFLF---DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ N+LI + + N L + + DFGLAR + +A G Y +M+PE
Sbjct: 135 --KSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA----GAYAWMAPEVIRA 188
Query: 618 GRFSEKSDVFSFGVLLLEIVSG 639
FS+ SDV+S+GVLL E+++G
Sbjct: 189 SMFSKGSDVWSYGVLLWELLTG 210
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DG--QEIAVKRLSK-ASGQGQEEFMNEVMVISNL-Q 549
N+ + + +G+G FG V K +++ DG + A+KR+ + AS +F E+ V+ L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H N++ LLG C R L EY P+ +L FL
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 117
Score = 29.3 bits (64), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYG--YMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGL+R + K+ +G +M+ E ++ SDV+S+GVLL EIVS
Sbjct: 185 DFGLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DG--QEIAVKRLSK-ASGQGQEEFMNEVMVISNL-Q 549
N+ + + +G+G FG V K +++ DG + A+KR+ + AS +F E+ V+ L
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H N++ LLG C R L EY P+ +L FL
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 114
Score = 29.3 bits (64), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYG--YMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGL+R + K+ +G +M+ E ++ SDV+S+GVLL EIVS
Sbjct: 182 DFGLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPN--------------------------------- 575
+H N++RL G + LI EY P
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 576 ---------KSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE-MIEGRMHD 189
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 250 PSQRPMLREV 259
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
L DFGLARI N D+ K VGT YMSPE ++EKSD++S G LL E+ +
Sbjct: 157 LGDFGLARIL--NHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPN--------------------------------- 575
+H N++RL G + LI EY P
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 576 ---------KSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPE-MIEGRMHD 189
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 250 PSQRPMLREV 259
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 60/199 (30%)
Query: 497 FQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEE--FMNEVMVISNLQHRNL 553
+ + LG+G FG V K K + QE AVK ++KAS + ++ + EV ++ L H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 554 VRLL---------------------------------------------GCCVEREENML 568
++L G + N++
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIV 143
Query: 569 IYEYMPN--------KSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
+ P K D + DFGL+ F Q K +GT Y++PE + G +
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPE-VLRGTY 199
Query: 621 SEKSDVFSFGVLLLEIVSG 639
EK DV+S GV+L ++SG
Sbjct: 200 DEKCDVWSAGVILYILLSG 218
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
L DFGLARI N D + K VGT YMSPE ++EKSD++S G LL E+ +
Sbjct: 157 LGDFGLARIL--NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 60/199 (30%)
Query: 497 FQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEE--FMNEVMVISNLQHRNL 553
+ + LG+G FG V K K + QE AVK ++KAS + ++ + EV ++ L H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 554 VRLL---------------------------------------------GCCVEREENML 568
++L G + N++
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIV 143
Query: 569 IYEYMPN--------KSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
+ P K D + DFGL+ F Q K +GT Y++PE + G +
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPE-VLRGTY 199
Query: 621 SEKSDVFSFGVLLLEIVSG 639
EK DV+S GV+L ++SG
Sbjct: 200 DEKCDVWSAGVILYILLSG 218
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE-MIEGRMHD 184
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 245 PSQRPMLREV 254
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
L DFGLARI N D + K VGT YMSPE ++EKSD++S G LL E+ +
Sbjct: 157 LGDFGLARIL--NHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPE-MIEGRMHD 185
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 245
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 246 PSQRPMLREV 255
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE-MIEGRMHD 185
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 245
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 246 PSQRPMLREV 255
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 52/188 (27%)
Query: 502 KLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+GQG G VY + GQE+A+++++ +E +NE++V+ ++ N+V L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ +E ++ EY+ SL D+
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 146
Query: 581 FLF---------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGV 631
L DFG Q + +T +VGT +M+PE + K D++S G+
Sbjct: 147 ILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 632 LLLEIVSG 639
+ +E++ G
Sbjct: 205 MAIEMIEG 212
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGKLQD------GQEIAVKRLSK-ASGQGQE 536
V+ +E + L +LGQG FG VY+G +D +AVK +++ AS + +
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 537 EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
EF+NE V+ ++VRLLG + + +++ E M + L S+L
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I+ + + K L+ +M+PE +G F+ SD++SFGV+L EI S
Sbjct: 173 DFGMTRDIYETDYYRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGKLQD------GQEIAVKRLSK-ASGQGQE 536
V+ +E + L +LGQG FG VY+G +D +AVK +++ AS + +
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 537 EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
EF+NE V+ ++VRLLG + + +++ E M + L S+L
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I + + K L+ +M+PE +G F+ SD++SFGV+L EI S
Sbjct: 173 DFGMTRDIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPE-MIEGRMHD 184
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 245 PSQRPMLREV 254
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 84/199 (42%), Gaps = 52/199 (26%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + ++ + I A+K L KA + + + EV + S+L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPE-MIEGRMHD 184
Query: 622 EKSDVFSFGVLLLEIVSGR 640
EK D++S GVL E + G+
Sbjct: 185 EKVDLWSLGVLCYEFLVGK 203
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 52/188 (27%)
Query: 502 KLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+GQG G VY + GQE+A+++++ +E +NE++V+ ++ N+V L
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ +E ++ EY+ SL D+
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDN 147
Query: 581 FLF---------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGV 631
L DFG Q + +T +VGT +M+PE + K D++S G+
Sbjct: 148 ILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 632 LLLEIVSG 639
+ +E++ G
Sbjct: 206 MAIEMIEG 213
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGKLQD------GQEIAVKRLSK-ASGQGQE 536
V+ +E + L +LGQG FG VY+G +D +AVK +++ AS + +
Sbjct: 7 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 66
Query: 537 EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
EF+NE V+ ++VRLLG + + +++ E M + L S+L
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 112
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I+ + + K L+ +M+PE +G F+ SD++SFGV+L EI S
Sbjct: 174 DFGMTRDIYETDYYRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPE-MIEGRMHD 184
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 245 PSQRPMLREV 254
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE-MIEGRMHD 183
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 184 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 243
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 244 PSQRPMLREV 253
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE-MIEGRMHD 189
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 250 PSQRPMLREV 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE-MIEGRMHD 184
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 245 PSQRPMLREV 254
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPE-MIEGRMHD 210
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 270
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 271 PSQRPMLREV 280
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 503 LGQGGFGPVYKGKLQD----GQ----EIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
LGQG F ++KG ++ GQ E+ +K L KA E F ++S L H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL 582
G C +EN+L+ E++ SLD++L
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYL 103
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPE-MIEGRMHD 187
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 248 PSQRPMLREV 257
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPE-MIEGRMHD 184
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 245 PSQRPMLREV 254
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPE-MIEGRMHD 184
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 245 PSQRPMLREV 254
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE-MIEGRMHD 187
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 248 PSQRPMLREV 257
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPE-MIEGRMHD 187
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 248 PSQRPMLREV 257
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE-MIEGRMHD 184
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 245 PSQRPMLREV 254
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE-MIEGRMHD 188
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 189 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 248
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 249 PSQRPMLREV 258
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE-MIEGRMHD 210
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 270
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 271 PSQRPMLREV 280
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPE-MIEGRMHD 187
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 248 PSQRPMLREV 257
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPE-MIEGRMHD 186
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 246
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 247 PSQRPMLREV 256
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPE-MIEGRMHD 186
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 246
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 247 PSQRPMLREV 256
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE-MIEGRMHD 187
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 248 PSQRPMLREV 257
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE-MIEGRMHD 189
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 250 PSQRPMLREV 259
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPE-MIEGRMHD 187
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 248 PSQRPMLREV 257
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 143 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE-MIEGRMHD 201
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 261
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 262 PSQRPMLREV 271
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 499 LANKLGQGGFGPVYKGKLQD------GQEIAVKRLSK-ASGQGQEEFMNEVMVISNLQHR 551
L +LGQG FG VY+G +D +AVK +++ AS + + EF+NE V+
Sbjct: 20 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
++VRLLG + + +++ E M + L S+L
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 110
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I+ + + K L+ +M+PE +G F+ SD++SFGV+L EI S
Sbjct: 172 DFGMTRDIYETDYYRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 54/189 (28%)
Query: 502 KLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+GQG G VY + GQE+A+++++ +E +NE++V+ ++ N+V L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ +E ++ EY+ SL D+
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 146
Query: 581 FLF---------DFGL-ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFG 630
L DFG A+I +Q+ +VGT +M+PE + K D++S G
Sbjct: 147 ILLGMDGSVKLTDFGFCAQI---TPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLG 203
Query: 631 VLLLEIVSG 639
++ +E++ G
Sbjct: 204 IMAIEMIEG 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 77/197 (39%), Gaps = 62/197 (31%)
Query: 503 LGQGGFGPVYKGKLQD-----GQEIAVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRL 556
LG+G FG V + G+++AVK L SG + E+ ++ NL H N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 557 LGCCVEREEN--MLIYEYMPNKSLDSFLF------------------------------- 583
G C E N LI E++P+ SL +L
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 148
Query: 584 --------------------DFGLARIFGGNQDQAATK--RLVGTYGYMSPEYAMEGRFS 621
DFGL + +++ K R + Y +PE M+ +F
Sbjct: 149 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFY 207
Query: 622 EKSDVFSFGVLLLEIVS 638
SDV+SFGV L E+++
Sbjct: 208 IASDVWSFGVTLHELLT 224
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE-MIEGRMHD 181
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 182 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 241
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 242 PSQRPMLREV 251
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 110/284 (38%), Gaps = 82/284 (28%)
Query: 497 FQLANKLGQGGFGPVYKGKLQ-DGQE---IAVKRLSKASGQGQE-EFMNEVMVISNLQHR 551
++ +G G FG V G+L+ G+ +A+K L + Q +F+ E ++ H
Sbjct: 45 IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHP 104
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLDSFLF----DFGLARIFGGNQDQAATKRLVGTY 607
N+V L G + M++ E+M N +LD+FL F + ++ G + AA R +
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADM 164
Query: 608 GYM------------------------------------------------SPEYAMEGR 619
GY+ +PE +
Sbjct: 165 GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRK 224
Query: 620 FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679
F+ SDV+S+G+++ E++S Y + + D + D++ + E G
Sbjct: 225 FTSASDVWSYGIVMWEVMS------------------YGERPYWDMSNQDVIKAI--EEG 264
Query: 680 FKMEIIRCVNVGLL-----CVQEFVKDRPNMPTVVSMLNSEIKD 718
+++ GL C Q+ +RP +V +L+ I++
Sbjct: 265 YRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMIRN 308
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 112/275 (40%), Gaps = 73/275 (26%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLS---KASGQGQEEFMNEVMVISN 547
N NF++ K+G+G F VY+ L DG +A+K++ + + + + E+ ++
Sbjct: 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ 88
Query: 548 LQHRNLVRLLGCCVEREENMLIYE-------------------YMPNKSL---------- 578
L H N+++ +E E ++ E +P +++
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 579 -----------------DSFLFDFGLARI-------FGGNQDQAATKRLVGTYGYMSPEY 614
+ F+ G+ ++ F ++ AA LVGT YMSPE
Sbjct: 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA-HSLVGTPYYMSPER 207
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD-P 673
E ++ KSD++S G LL E+ + + + FY G L++ I+ D P
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQ--SPFY---------GDKMNLYSLCKKIEQCDYP 256
Query: 674 LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTV 708
+ + E+ + VN +C+ + RP++ V
Sbjct: 257 PLPSDHYSEELRQLVN---MCINPDPEKRPDVTYV 288
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 78/193 (40%), Gaps = 60/193 (31%)
Query: 503 LGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEE--FMNEVMVISNLQHRNLVRLL-- 557
LG+G FG V K K + QE AVK ++KAS + ++ + EV ++ L H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 558 -------------------------------------------GCCVEREENMLIYEYMP 574
G + N++ + P
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 575 N--------KSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDV 626
K D + DFGL+ F Q K +GT Y++PE + G + EK DV
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPE-VLRGTYDEKCDV 205
Query: 627 FSFGVLLLEIVSG 639
+S GV+L ++SG
Sbjct: 206 WSAGVILYILLSG 218
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 55/250 (22%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS- 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPE-MIEGRMHD 185
Query: 622 EKSDVFSFGVLLLEIVSGRK--NTSFYHEEFE-LTLLGYAWKLWNDNNVIDLVDPLISES 678
EK D++S GVL E + G+ + Y E ++ ++ + + + + DL+ L+ +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 245
Query: 679 GFKMEIIRCV 688
+ ++R V
Sbjct: 246 PSQRPMLREV 255
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 52/199 (26%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNL 548
A +F++ LG+G FG VY + + + I A+K L KA + + + EV + S+L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMP---------------------------------- 574
+H N++RL G + LI EY P
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 575 --------NKSLDSFLFDFGLARI--FGGNQDQAATKR--LVGTYGYMSPEYAMEGR-FS 621
K + L G +I FG + +++R L GT Y+ PE +EGR
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE-XIEGRXHD 189
Query: 622 EKSDVFSFGVLLLEIVSGR 640
EK D++S GVL E + G+
Sbjct: 190 EKVDLWSLGVLCYEFLVGK 208
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 54/189 (28%)
Query: 502 KLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+GQG G VY + GQE+A+++++ +E +NE++V+ ++ N+V L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ +E ++ EY+ SL D+
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 146
Query: 581 FLF---------DFGL-ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFG 630
L DFG A+I +Q+ +VGT +M+PE + K D++S G
Sbjct: 147 ILLGMDGSVKLTDFGFCAQI---TPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLG 203
Query: 631 VLLLEIVSG 639
++ +E++ G
Sbjct: 204 IMAIEMIEG 212
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 552 NLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF------------ 583
N+V+LL + L++E++ P + S+LF
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR- 619
DFGLAR FG + T +V T Y +PE + +
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVV-TLWYRAPEILLGXKY 180
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
+S D++S G + E+V+ R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 54/189 (28%)
Query: 502 KLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+GQG G VY + GQE+A+++++ +E +NE++V+ ++ N+V L
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ +E ++ EY+ SL D+
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 147
Query: 581 FLF---------DFGL-ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFG 630
L DFG A+I +Q+ +VGT +M+PE + K D++S G
Sbjct: 148 ILLGMDGSVKLTDFGFCAQI---TPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLG 204
Query: 631 VLLLEIVSG 639
++ +E++ G
Sbjct: 205 IMAIEMIEG 213
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 52/200 (26%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQE---EFMNEVMVISNLQHRN 552
F ++G G FG VY + +++ + +A+K++S + Q E + + EV + L+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 553 LVRLLGCCVEREENMLIYEY---------------------------------------M 573
++ GC + L+ EY M
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 136
Query: 574 PNKSLDS---FLFDFGLARI--FGGNQDQAATKRLVGTYGYMSPEYAM---EGRFSEKSD 625
++ + + L + GL ++ FG A VGT +M+PE + EG++ K D
Sbjct: 137 IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVD 196
Query: 626 VFSFGVLLLEIVSGRKNTSF 645
V+S G+ +E+ RK F
Sbjct: 197 VWSLGITCIELAE-RKPPLF 215
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 552 NLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF------------ 583
N+V+LL + L++E++ P + S+LF
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR- 619
DFGLAR FG + T +V T Y +PE + +
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVV-TLWYRAPEILLGCKY 180
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
+S D++S G + E+V+ R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 552 NLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF------------ 583
N+V+LL + L++E++ P + S+LF
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR- 619
DFGLAR FG + T +V T Y +PE + +
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVV-TLWYRAPEILLGXKY 187
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
+S D++S G + E+V+ R
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRR 208
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 552 NLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF------------ 583
N+V+LL + L++E++ P + S+LF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR- 619
DFGLAR FG + T +V T Y +PE + +
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVV-TLWYRAPEILLGCKY 179
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
+S D++S G + E+V+ R
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + T +V T Y +PE +
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVV-TLWYRAPEILLGC 179
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 59/223 (26%)
Query: 470 STEKV--NPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKR 526
S +KV N + D+L +F ++F++ LG+G FG VY + + I A+K
Sbjct: 1 SMQKVMENSSGTPDILTRHF-----TIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKV 55
Query: 527 LSKASGQGQ---EEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL----- 578
L K+ + + + E+ + ++L H N++RL +R LI EY P L
Sbjct: 56 LFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQ 115
Query: 579 ------------------DSFLFDFGLARI---------------------FGGNQDQAA 599
D+ ++ G I FG + +
Sbjct: 116 KSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS 175
Query: 600 TKR--LVGTYGYMSPEYAMEGRF-SEKSDVFSFGVLLLEIVSG 639
+R + GT Y+ PE +EGR +EK D++ GVL E++ G
Sbjct: 176 LRRKTMCGTLDYLPPE-MIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 121 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 178
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 52/200 (26%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQE---EFMNEVMVISNLQHRN 552
F ++G G FG VY + +++ + +A+K++S + Q E + + EV + L+H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 553 LVRLLGCCVEREENMLIYEY---------------------------------------M 573
++ GC + L+ EY M
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 175
Query: 574 PNKSLDS---FLFDFGLARI--FGGNQDQAATKRLVGTYGYMSPEYAM---EGRFSEKSD 625
++ + + L + GL ++ FG A VGT +M+PE + EG++ K D
Sbjct: 176 IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVD 235
Query: 626 VFSFGVLLLEIVSGRKNTSF 645
V+S G+ +E+ RK F
Sbjct: 236 VWSLGITCIELAE-RKPPLF 254
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 552 NLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF------------ 583
N+V+LL + L++E++ P + S+LF
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR- 619
DFGLAR FG + T +V T Y +PE + +
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVV-TLWYRAPEILLGCKY 180
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
+S D++S G + E+V+ R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 552 NLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF------------ 583
N+V+LL + L++E++ P + S+LF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR- 619
DFGLAR FG + T +V T Y +PE + +
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVV-TLWYRAPEILLGCKY 179
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
+S D++S G + E+V+ R
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 178
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 178
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 178
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 552 NLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF------------ 583
N+V+LL + L++E++ P + S+LF
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR- 619
DFGLAR FG + T +V T Y +PE + +
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVV-TLWYRAPEILLGCKY 180
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
+S D++S G + E+V+ R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 179
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 62/197 (31%)
Query: 503 LGQGGFGPVYKGKLQD-----GQEIAVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRL 556
LG+G FG V + G+++AVK L SG + E+ ++ NL H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 557 LGCCVEREEN--MLIYEYMPNKSLDSFL----------------------FDFGLARIFG 592
G C E N LI E++P+ SL +L D+ +R +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY- 135
Query: 593 GNQDQAATKRLV--------GTYG-----------------------YMSPEYAMEGRFS 621
++D AA LV G +G + +PE M+ +F
Sbjct: 136 VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFY 195
Query: 622 EKSDVFSFGVLLLEIVS 638
SDV+SFGV L E+++
Sbjct: 196 IASDVWSFGVTLHELLT 212
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 124 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 181
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 552 NLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF------------ 583
N+V+LL + L++E++ P + S+LF
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR- 619
DFGLAR FG + T +V T Y +PE + +
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVV-TLWYRAPEILLGCKY 184
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
+S D++S G + E+V+ R
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRR 205
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
L +LG G FG V GK + ++AVK + + S ++EF E + L H LV+ G
Sbjct: 12 LLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYG 70
Query: 559 CCVEREENMLIYEYMPNKSLDSFLFDFG 586
C + ++ EY+ N L ++L G
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYLRSHG 98
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 180
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 181
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 180
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 181
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 180
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 123 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 180
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 179
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 80/201 (39%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 552 NLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF------------ 583
N+V+LL + L++E++ P + S+LF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR- 619
DFGLAR FG + V T Y +PE + +
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGCKY 179
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
+S D++S G + E+V+ R
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 552 NLVRLLGCCVEREENMLIYEY----------------MPNKSLDSFLF------------ 583
N+V+LL + L++E+ +P + S+LF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR- 619
DFGLAR FG + T +V T Y +PE + +
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVV-TLWYRAPEILLGCKY 179
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
+S D++S G + E+V+ R
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 178
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 179
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 80/201 (39%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 552 NLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF------------ 583
N+V+LL + L++E++ P + S+LF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR- 619
DFGLAR FG + V T Y +PE + +
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGCKY 179
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
+S D++S G + E+V+ R
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 80/201 (39%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 552 NLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF------------ 583
N+V+LL + L++E++ P + S+LF
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR- 619
DFGLAR FG + V T Y +PE + +
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGCKY 181
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
+S D++S G + E+V+ R
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 552 NLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF------------ 583
N+V+LL + L++E++ P + S+LF
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR- 619
DFGLAR FG + T +V T Y +PE + +
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVV-TLWYRAPEILLGCKY 187
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
+S D++S G + E+V+ R
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRR 208
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 125 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 182
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 88/210 (41%), Gaps = 66/210 (31%)
Query: 490 LANATNNFQLANKLGQGGFGPVYKGK-LQDGQE-IAVKRLSKASGQGQEEF--MNEVMVI 545
L A ++ ++G+G +G V+K + L++G +A+KR+ +G+ + EV V+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 546 SNL---QHRNLVRLLGCC----VEREENM-LIYEY----------------MPNKSLDSF 581
+L +H N+VRL C +RE + L++E+ +P +++
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 582 LF-----------------------------------DFGLARIFGGNQDQAATKRLVGT 606
+F DFGLARI+ Q A +V T
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVT 182
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEI 636
Y +PE ++ ++ D++S G + E+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 88/210 (41%), Gaps = 66/210 (31%)
Query: 490 LANATNNFQLANKLGQGGFGPVYKGK-LQDGQE-IAVKRLSKASGQGQEEF--MNEVMVI 545
L A ++ ++G+G +G V+K + L++G +A+KR+ +G+ + EV V+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 546 SNL---QHRNLVRLLGCC----VEREENM-LIYEY----------------MPNKSLDSF 581
+L +H N+VRL C +RE + L++E+ +P +++
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 582 LF-----------------------------------DFGLARIFGGNQDQAATKRLVGT 606
+F DFGLARI+ Q A +V T
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVT 182
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEI 636
Y +PE ++ ++ D++S G + E+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 181
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 88/210 (41%), Gaps = 66/210 (31%)
Query: 490 LANATNNFQLANKLGQGGFGPVYKGK-LQDGQE-IAVKRLSKASGQGQEEF--MNEVMVI 545
L A ++ ++G+G +G V+K + L++G +A+KR+ +G+ + EV V+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 546 SNL---QHRNLVRLLGCC----VEREENM-LIYEY----------------MPNKSLDSF 581
+L +H N+VRL C +RE + L++E+ +P +++
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 582 LF-----------------------------------DFGLARIFGGNQDQAATKRLVGT 606
+F DFGLARI+ Q A +V T
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVT 182
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEI 636
Y +PE ++ ++ D++S G + E+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF---------- 583
H N+V+LL + L++E++ P + S+LF
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 181
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 69 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 127
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 128 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 187
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 188 RIYTHQSDVWSYGVTVWELMT 208
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 134
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 135 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 195 RIYTHQSDVWSYGVTVWELMT 215
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 137
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 138 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 198 RIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 134
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 135 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 195 RIYTHQSDVWSYGVTVWELMT 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 137 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 197 RIYTHQSDVWSYGVTVWELMT 217
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 196 RIYTHQSDVWSYGVTVWELMT 216
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQ 549
+ NFQ K+G+G +G VYK + + G+ +A+K RL + + E+ ++ L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 550 HRNLVRLLGCCVEREENMLIYEY----------------MPNKSLDSFLF---------- 583
H N+V+LL + L++E+ +P + S+LF
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR FG + V T Y +PE +
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 181
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S G + E+V+ R
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 137 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 197 RIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 137 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 197 RIYTHQSDVWSYGVTVWELMT 217
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 72 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYL 130
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 131 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 190
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 191 RIYTHQSDVWSYGVTVWELMT 211
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 85 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 143
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 144 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 203
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 204 RIYTHQSDVWSYGVTVWELMT 224
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 93/228 (40%), Gaps = 66/228 (28%)
Query: 469 FSTEKVNPARLQDLLVFNFEELANATNNFQLAN-KLGQGGFGPVYKG--KLQDGQ-EIAV 524
F + +P L+D +F +N +A+ +LG G FG V +G +++ Q ++A+
Sbjct: 315 FESPFSDPEELKDKKLFL------KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAI 368
Query: 525 KRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLF 583
K L + + + EE M E ++ L + +VRL+G C + E ML+ E L FL
Sbjct: 369 KVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV 427
Query: 584 ---------------------------------------------------DFGLARIFG 592
DFGL++ G
Sbjct: 428 GKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487
Query: 593 GNQDQAATKRLVGTY--GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ D T R G + + +PE +FS +SDV+S+GV + E +S
Sbjct: 488 AD-DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 81 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 139
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 140 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 199
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 200 RIYTHQSDVWSYGVTVWELMT 220
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 141 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 201 RIYTHQSDVWSYGVTVWELMT 221
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 11/95 (11%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNE--VMVISNLQHRN 552
+N +L +G+G +G VYKG L D + +AVK S A+ Q F+NE + + ++H N
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDN 68
Query: 553 LVRLL-----GCCVEREENMLIYEYMPNKSLDSFL 582
+ R + R E +L+ EY PN SL +L
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL 103
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 137 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 197 RIYTHQSDVWSYGVTVWELMT 217
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 111/284 (39%), Gaps = 82/284 (28%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
L+ ++G G FG VYKGK + + ++ + + + F NEV V+ +H N++ +G
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 559 CCVEREENMLI--------------------------------------YEYMPN----- 575
++N+ I Y + N
Sbjct: 100 YMT--KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRD 157
Query: 576 -KSLDSFLF--------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM---EGRFSEK 623
KS + FL DFGLA + ++ G+ +M+PE FS +
Sbjct: 158 MKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQ 217
Query: 624 SDVFSFGVLLLEIVSGRKNTSFYHEEFELTLL---GYA----WKLWNDNNVIDLVDPLIS 676
SDV+S+G++L E+++G S + ++ + GYA KL+ N + L++
Sbjct: 218 SDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLY--KNCPKAMKRLVA 275
Query: 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720
+ CV++ ++RP P ++S + LP
Sbjct: 276 D----------------CVKKVKEERPLFPQILSSIELLQHSLP 303
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 196 RIYTHQSDVWSYGVTVWELMT 216
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 110/281 (39%), Gaps = 67/281 (23%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
++ +G+G FG V K K + +++A+K++ S + + F+ E+ +S + H N+V
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIV 65
Query: 555 RLLGC--------------------------------------CVEREENMLIYEYMPNK 576
+L G C++ + + M K
Sbjct: 66 KLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 125
Query: 577 SL-------DSFLFDFG--LARI--FGGNQD-QAATKRLVGTYGYMSPEYAMEGRFSEKS 624
+L + L G + +I FG D Q G+ +M+PE +SEK
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKC 185
Query: 625 DVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI 684
DVFS+G++L E+++ RK +E W + N PLI +E
Sbjct: 186 DVFSWGIILWEVITRRKP----FDEIGGPAFRIMWAVHNGTR-----PPLIKNLPKPIE- 235
Query: 685 IRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQP 725
++ C + RP+M +V ++ ++ P A +P
Sbjct: 236 ----SLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 272
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 100 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 158
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 159 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 218
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 219 RIYTHQSDVWSYGVTVWELMT 239
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 497 FQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+++ +LG G FG VYK K ++ G A K + S + E+++ E+ +++ H +V+
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYM 610
LLG + ++ E+ P ++D+ + + L R Q Q ++++ ++
Sbjct: 73 LLGAYYHDGKLWIMIEFCPGGAVDAIMLE--LDRGLTEPQIQVVCRQMLEALNFL 125
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 80/189 (42%), Gaps = 54/189 (28%)
Query: 502 KLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+G+G G V + G+++AVK + Q +E NEV+++ + QH N+V +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ EE ++ E++ +L DS
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDS 171
Query: 581 FLF---------DFGL-ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFG 630
L DFG A+I ++D K LVGT +M+PE ++ + D++S G
Sbjct: 172 ILLTLDGRVKLSDFGFCAQI---SKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLG 228
Query: 631 VLLLEIVSG 639
++++E+V G
Sbjct: 229 IMVIEMVDG 237
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQGQEEFMNEVMVISNLQH 550
N + +++ +LG G FG VYK + ++ + A K + S + E++M E+ ++++ H
Sbjct: 34 NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 93
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYM 610
N+V+LL ++ E+ ++D+ + + L R +Q Q K+ + Y+
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYL 151
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 53/195 (27%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
+ ++G G FG VYKGK + + ++ + Q + F NEV V+ +H N++ +G
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 559 CCVERE--------------ENMLIYE--------------------YMPNKSL------ 578
+ + ++ I E Y+ KS+
Sbjct: 72 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 131
Query: 579 --DSFLF--------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYA-MEGR--FSEKSD 625
+ FL DFGLA + ++L G+ +M+PE M+ + +S +SD
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 626 VFSFGVLLLEIVSGR 640
V++FG++L E+++G+
Sbjct: 192 VYAFGIVLYELMTGQ 206
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 55/199 (27%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLS-KASGQG-QEEFMNEVMVISNLQHRN 552
+Q K+G+G +G VYK K G+ +A+KR+ A +G + E+ ++ L H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 553 LVRLLGCCVEREENMLIYEYMP---NKSLDS------------FLF-------------- 583
+V L+ L++E+M K LD +L+
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI 140
Query: 584 ---------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM-EGRFS 621
DFGLAR FG ++ T +V T Y +P+ M ++S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPV-RSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 622 EKSDVFSFGVLLLEIVSGR 640
D++S G + E+++G+
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQGQEEFMNEVMVISNLQH 550
N + +++ +LG G FG VYK + ++ + A K + S + E++M E+ ++++ H
Sbjct: 34 NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 93
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYM 610
N+V+LL ++ E+ ++D+ + + L R +Q Q K+ + Y+
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYL 151
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQGQEEFMNEVMVISNLQH 550
N + +++ +LG G FG VYK + ++ + A K + S + E++M E+ ++++ H
Sbjct: 34 NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 93
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYM 610
N+V+LL ++ E+ ++D+ + + L R +Q Q K+ + Y+
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYL 151
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 53/195 (27%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
+ ++G G FG VYKGK + + ++ + Q + F NEV V+ +H N++ +G
Sbjct: 17 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 559 CCVERE--------------ENMLIYE--------------------YMPNKSL------ 578
+ + ++ I E Y+ KS+
Sbjct: 77 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 136
Query: 579 --DSFLF--------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYA-MEGR--FSEKSD 625
+ FL DFGLA + ++L G+ +M+PE M+ + +S +SD
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 626 VFSFGVLLLEIVSGR 640
V++FG++L E+++G+
Sbjct: 197 VYAFGIVLYELMTGQ 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 53/195 (27%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
+ ++G G FG VYKGK + + ++ + Q + F NEV V+ +H N++ +G
Sbjct: 17 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 559 CCVERE--------------ENMLIYE--------------------YMPNKSL------ 578
+ + ++ I E Y+ KS+
Sbjct: 77 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 136
Query: 579 --DSFLF--------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYA-MEGR--FSEKSD 625
+ FL DFGLA + ++L G+ +M+PE M+ + +S +SD
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 626 VFSFGVLLLEIVSGR 640
V++FG++L E+++G+
Sbjct: 197 VYAFGIVLYELMTGQ 211
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 55/199 (27%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLS-KASGQG-QEEFMNEVMVISNLQHRN 552
+Q K+G+G +G VYK K G+ +A+KR+ A +G + E+ ++ L H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 553 LVRLLGCCVEREENMLIYEYMP---NKSLDS------------FLF-------------- 583
+V L+ L++E+M K LD +L+
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI 140
Query: 584 ---------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM-EGRFS 621
DFGLAR FG ++ T +V T Y +P+ M ++S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPV-RSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 622 EKSDVFSFGVLLLEIVSGR 640
D++S G + E+++G+
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 53/195 (27%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
+ ++G G FG VYKGK + + ++ + Q + F NEV V+ +H N++ +G
Sbjct: 14 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 559 CCVERE--------------ENMLIYE--------------------YMPNKSL------ 578
+ + ++ I E Y+ KS+
Sbjct: 74 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 133
Query: 579 --DSFLF--------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYA-MEGR--FSEKSD 625
+ FL DFGLA + ++L G+ +M+PE M+ + +S +SD
Sbjct: 134 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 193
Query: 626 VFSFGVLLLEIVSGR 640
V++FG++L E+++G+
Sbjct: 194 VYAFGIVLYELMTGQ 208
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 497 FQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+++ +LG G FG VYK K ++ G A K + S + E+++ E+ +++ H +V+
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYM 610
LLG + ++ E+ P ++D+ + + L R Q Q ++++ ++
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAVDAIMLE--LDRGLTEPQIQVVCRQMLEALNFL 133
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 60/202 (29%)
Query: 495 NNFQLAN-KLGQGGFGPVYKG--KLQDGQ-EIAVKRLSKASGQGQ-EEFMNEVMVISNLQ 549
+N +A+ +LG G FG V +G +++ Q ++A+K L + + + EE M E ++ L
Sbjct: 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD 68
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLF-------------------------- 583
+ +VRL+G C + E ML+ E L FL
Sbjct: 69 NPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE 127
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAM 616
DFGL++ G + D T R G + + +PE
Sbjct: 128 EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD-DSYYTARSAGKWPLKWYAPECIN 186
Query: 617 EGRFSEKSDVFSFGVLLLEIVS 638
+FS +SDV+S+GV + E +S
Sbjct: 187 FRKFSSRSDVWSYGVTMWEALS 208
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 53/195 (27%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
+ ++G G FG VYKGK + + ++ + Q + F NEV V+ +H N++ +G
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 559 -------------C----------CVEREENMLIY-----------EYMPNKSL------ 578
C +E + M+ +Y+ KS+
Sbjct: 72 YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 131
Query: 579 --DSFLF--------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYA-MEGR--FSEKSD 625
+ FL DFGLA + ++L G+ +M+PE M+ + +S +SD
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 626 VFSFGVLLLEIVSGR 640
V++FG++L E+++G+
Sbjct: 192 VYAFGIVLYELMTGQ 206
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 53/195 (27%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
+ ++G G FG VYKGK + + ++ + Q + F NEV V+ +H N++ +G
Sbjct: 39 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 559 CCVERE--------------ENMLIYE--------------------YMPNKSL------ 578
+ + ++ I E Y+ KS+
Sbjct: 99 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 158
Query: 579 --DSFLF--------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYA-MEGR--FSEKSD 625
+ FL DFGLA + ++L G+ +M+PE M+ + +S +SD
Sbjct: 159 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 218
Query: 626 VFSFGVLLLEIVSGR 640
V++FG++L E+++G+
Sbjct: 219 VYAFGIVLYELMTGQ 233
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 81/201 (40%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
NFQ K+G+G +G VYK + + G+ +A+ RL + + E+ ++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 552 NLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF------------ 583
N+V+LL + L++E++ P + S+LF
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR- 619
DFGLAR FG + T +V T Y +PE + +
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVV-TLWYRAPEILLGCKY 180
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
+S D++S G + E+V+ R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 81/201 (40%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
NFQ K+G+G +G VYK + + G+ +A+ RL + + E+ ++ L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 552 NLVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF------------ 583
N+V+LL + L++E++ P + S+LF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR- 619
DFGLAR FG + T +V T Y +PE + +
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVV-TLWYRAPEILLGCKY 179
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
+S D++S G + E+V+ R
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 53/195 (27%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
+ ++G G FG VYKGK + + ++ + Q + F NEV V+ +H N++ +G
Sbjct: 40 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 559 CCVERE--------------ENMLIYE--------------------YMPNKSL------ 578
+ + ++ I E Y+ KS+
Sbjct: 100 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 159
Query: 579 --DSFLF--------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYA-MEGR--FSEKSD 625
+ FL DFGLA + ++L G+ +M+PE M+ + +S +SD
Sbjct: 160 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 219
Query: 626 VFSFGVLLLEIVSGR 640
V++FG++L E+++G+
Sbjct: 220 VYAFGIVLYELMTGQ 234
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L+ N+ + + DFG A++ QA VGT Y
Sbjct: 155 HRDL---------KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE E S+ SD+++ G ++ ++V+G
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 60/215 (27%)
Query: 481 DLLVFNFEELANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFM 539
DLL +++E N LG+G +G VY G+ L + IA+K + + + +
Sbjct: 13 DLLEYDYEYDENGDRVV-----LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH 67
Query: 540 NEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL-------------FDFG 586
E+ + +L+H+N+V+ LG E + E +P SL + L F
Sbjct: 68 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY 127
Query: 587 LARIFGG------NQ-----------------------DQAATKRLV----------GTY 607
+I G NQ D +KRL GT
Sbjct: 128 TKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTL 187
Query: 608 GYMSPEYAMEGR--FSEKSDVFSFGVLLLEIVSGR 640
YM+PE +G + + +D++S G ++E+ +G+
Sbjct: 188 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 53/195 (27%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
+ ++G G FG VYKGK + + ++ + Q + F NEV V+ +H N++ +G
Sbjct: 16 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 559 CCVERE--------ENMLIY--------------------------EYMPNKSL------ 578
+ + E +Y +Y+ KS+
Sbjct: 76 YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 135
Query: 579 --DSFLF--------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM---EGRFSEKSD 625
+ FL DFGLA + ++L G+ +M+PE +S +SD
Sbjct: 136 SNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 195
Query: 626 VFSFGVLLLEIVSGR 640
V++FG++L E+++G+
Sbjct: 196 VYAFGIVLYELMTGQ 210
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 55/191 (28%)
Query: 502 KLGQGGFGPVYKGKLQDGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGC 559
K+G+G +G VYK + G+ A+K RL K + E+ ++ L+H N+V+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 560 CVEREENMLIYEYMPN---KSLD------------SFLF--------------------- 583
++ +L++E++ K LD SFL
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKP 128
Query: 584 --------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM-EGRFSEKSDVFS 628
DFGLAR FG + + V T Y +P+ M ++S D++S
Sbjct: 129 QNLLINREGELKIADFGLARAFGIPVRKYTHE--VVTLWYRAPDVLMGSKKYSTTIDIWS 186
Query: 629 FGVLLLEIVSG 639
G + E+V+G
Sbjct: 187 VGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 55/191 (28%)
Query: 502 KLGQGGFGPVYKGKLQDGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGC 559
K+G+G +G VYK + G+ A+K RL K + E+ ++ L+H N+V+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 560 CVEREENMLIYEYMPN---KSLD------------SFLF--------------------- 583
++ +L++E++ K LD SFL
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKP 128
Query: 584 --------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM-EGRFSEKSDVFS 628
DFGLAR FG + + V T Y +P+ M ++S D++S
Sbjct: 129 QNLLINREGELKIADFGLARAFGIPVRKYTHE--VVTLWYRAPDVLMGSKKYSTTIDIWS 186
Query: 629 FGVLLLEIVSG 639
G + E+V+G
Sbjct: 187 VGCIFAEMVNG 197
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 137
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFG A++ G + + + +M+ E +
Sbjct: 138 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 198 RIYTHQSDVWSYGVTVWELMT 218
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ L G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 141 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 201 RIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ L G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ L G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 141 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 201 RIYTHQSDVWSYGVTVWELMT 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFG A++ G + + + +M+ E +
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 196 RIYTHQSDVWSYGVTVWELMT 216
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 55/191 (28%)
Query: 502 KLGQGGFGPVYKGKLQDGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGC 559
K+G+G +G VYK + G+ A+K RL K + E+ ++ L+H N+V+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 560 CVEREENMLIYEYMPN---KSLD------------SFLF--------------------- 583
++ +L++E++ K LD SFL
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKP 128
Query: 584 --------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM-EGRFSEKSDVFS 628
DFGLAR FG + + + T Y +P+ M ++S D++S
Sbjct: 129 QNLLINREGELKIADFGLARAFGIPVRKYTHE--IVTLWYRAPDVLMGSKKYSTTIDIWS 186
Query: 629 FGVLLLEIVSG 639
G + E+V+G
Sbjct: 187 VGCIFAEMVNG 197
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFG A++ G + + + +M+ E +
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 196 RIYTHQSDVWSYGVTVWELMT 216
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 61/199 (30%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
+ ++G G FG VYKGK + + ++ + Q + F NEV V+ +H N++ +G
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 559 CCVERE--------------ENMLIYE--------------------YMPNKSL------ 578
+ + ++ I E Y+ KS+
Sbjct: 72 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 131
Query: 579 --DSFLF--------DFGLA----RIFGGNQDQAATKRLVGTYGYMSPEYA-MEGR--FS 621
+ FL DFGLA R G +Q ++L G+ +M+PE M+ + +S
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ----FEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 622 EKSDVFSFGVLLLEIVSGR 640
+SDV++FG++L E+++G+
Sbjct: 188 FQSDVYAFGIVLYELMTGQ 206
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFG A++ G + + + +M+ E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFG A++ G + + + +M+ E +
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 196 RIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFG A++ G + + + +M+ E +
Sbjct: 141 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 201 RIYTHQSDVWSYGVTVWELMT 221
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 76/200 (38%), Gaps = 59/200 (29%)
Query: 497 FQLANKLGQGGFGPVYKGKLQD---GQEIAVKRLSKASGQGQE---EFMNEVMVISNLQH 550
+++ +KLG GG VY +D ++A+K + + +E F EV S L H
Sbjct: 13 YKIVDKLGGGGMSTVYLA--EDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFL---------------------------- 582
+N+V ++ E + L+ EY+ +L ++
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 583 ----------------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
FDFG+A+ T ++GT Y SPE A
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS-LTQTNHVLGTVQYFSPEQAKGEAT 189
Query: 621 SEKSDVFSFGVLLLEIVSGR 640
E +D++S G++L E++ G
Sbjct: 190 DECTDIYSIGIVLYEMLVGE 209
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 58/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNL 548
F+ LG G FG VYKG + +G+++ A+ L +A S + +E ++E V++++
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
+ ++ RLLG C+ LI + MP L +
Sbjct: 109 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 167
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ DFGLA++ G + + + +M+ E +
Sbjct: 168 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 227
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
++ +SDV+S+GV + E+++
Sbjct: 228 RIYTHQSDVWSYGVTVWELMT 248
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 78/199 (39%), Gaps = 56/199 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQG--QEEFMNEVMVISNLQHR 551
++ K+G+G +G V+K + +D GQ +A+K+ ++ ++ + E+ ++ L+H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLDSF------------------------------ 581
NLV LL + L++EY + L
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 582 --------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM-EGRF 620
L DFG AR+ G D + V T Y SPE + + ++
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--VATRWYRSPELLVGDTQY 180
Query: 621 SEKSDVFSFGVLLLEIVSG 639
DV++ G + E++SG
Sbjct: 181 GPPVDVWAIGCVFAELLSG 199
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 61/199 (30%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
+ ++G G FG VYKGK + + ++ + Q + F NEV V+ +H N++ +G
Sbjct: 32 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 559 CCVERE--------------ENMLIYE--------------------YMPNKSL------ 578
+ + ++ I E Y+ KS+
Sbjct: 92 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 151
Query: 579 --DSFLF--------DFGLA----RIFGGNQDQAATKRLVGTYGYMSPEYA-MEGR--FS 621
+ FL DFGLA R G +Q ++L G+ +M+PE M+ + +S
Sbjct: 152 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ----FEQLSGSILWMAPEVIRMQDKNPYS 207
Query: 622 EKSDVFSFGVLLLEIVSGR 640
+SDV++FG++L E+++G+
Sbjct: 208 FQSDVYAFGIVLYELMTGQ 226
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 78/193 (40%), Gaps = 55/193 (28%)
Query: 503 LGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCV 561
LG+G +G VY G+ L + IA+K + + + + E+ + +L+H+N+V+ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 562 EREENMLIYEYMPNKSLDSFL-------------FDFGLARIFGG------NQ------- 595
E + E +P SL + L F +I G NQ
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 135
Query: 596 ----------------DQAATKRLV----------GTYGYMSPEYAMEGR--FSEKSDVF 627
D +KRL GT YM+PE +G + + +D++
Sbjct: 136 GDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIW 195
Query: 628 SFGVLLLEIVSGR 640
S G ++E+ +G+
Sbjct: 196 SLGCTIIEMATGK 208
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 582 LFDFGLARIFGGNQDQAA-TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+ DFG+AR + + T ++GT Y+SPE A +SDV+S G +L E+++G
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 582 LFDFGLARIFGGNQDQAA-TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+ DFG+AR + + T ++GT Y+SPE A +SDV+S G +L E+++G
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 86/229 (37%), Gaps = 65/229 (28%)
Query: 487 FEELANATNNFQLANKLGQGGFGPVYKGKLQD-----GQEIAVKRLSKASGQGQEEFMNE 541
FEE + + ++LG+G FG V + G +AVK+L + Q +F E
Sbjct: 4 FEE-----RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE 58
Query: 542 VMVISNLQHRNLVRLLGCCVE--REENMLIYEYMPNKSLDSFL----------------- 582
+ ++ L +V+ G R E L+ EY+P+ L FL
Sbjct: 59 IQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS 118
Query: 583 ----------------------------------FDFGLARIFGGNQDQAATKRL-VGTY 607
DFGLA++ ++D +
Sbjct: 119 QICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPI 178
Query: 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLG 656
+ +PE + FS +SDV+SFGV+L E+ + + EF L ++G
Sbjct: 179 FWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF-LRMMG 226
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 582 LFDFGLARIFGGNQDQAA-TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+ DFG+AR + + T ++GT Y+SPE A +SDV+S G +L E+++G
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 582 LFDFGLARIFGGNQDQAA-TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+ DFG+AR + + T ++GT Y+SPE A +SDV+S G +L E+++G
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 80/224 (35%), Gaps = 81/224 (36%)
Query: 496 NFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRL-SKASGQGQEEFMNEVMVISNL 548
N + LG G FG V K ++AVK L KA +E M+E+ +++ L
Sbjct: 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 549 -QHRNLVRLLG--------------CC-------------------VERE---------- 564
H N+V LLG CC +E E
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 565 ------ENMLIYEYMPNKSLDSFLF------------------------DFGLARIFGGN 594
E++L + Y K ++ F DFGLAR +
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD 225
Query: 595 QDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ +M+PE EG ++ KSDV+S+G+LL EI S
Sbjct: 226 SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 491 ANATNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEE-----FMNEVMV 544
A + + ++ KLG+G +G VYK + +A+KR+ + +EE + EV +
Sbjct: 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRL---EHEEEGVPGTAIREVSL 86
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPN 575
+ LQHRN++ L LI+EY N
Sbjct: 87 LKELQHRNIIELKSVIHHNHRLHLIFEYAEN 117
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 61/199 (30%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
+ ++G G FG VYKGK + + ++ + Q + F NEV V+ +H N++ +G
Sbjct: 40 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 559 CCVERE--------------ENMLIYE--------------------YMPNKSL------ 578
+ + ++ I E Y+ KS+
Sbjct: 100 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 159
Query: 579 --DSFLF--------DFGLA----RIFGGNQDQAATKRLVGTYGYMSPEYA-MEGR--FS 621
+ FL DFGLA R G +Q ++L G+ +M+PE M+ + +S
Sbjct: 160 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ----FEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 622 EKSDVFSFGVLLLEIVSGR 640
+SDV++FG++L E+++G+
Sbjct: 216 FQSDVYAFGIVLYELMTGQ 234
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 582 LFDFGLARIFGGNQDQAA-TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+ DFG+AR + + T ++GT Y+SPE A +SDV+S G +L E+++G
Sbjct: 174 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 73/204 (35%), Gaps = 62/204 (30%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSK---ASGQGQEEFMNEVMVISN 547
+ +L KLG G FG V +G+ +AVK L + + ++F+ EV + +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSL--------DSFLF---------------- 583
L HRNL+RL G + M + E P SL FL
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 584 ---------------------------DFGLARIFGGNQDQAATK--RLVGTYGYMSPEY 614
DFGL R N D + R V + + +PE
Sbjct: 127 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPES 185
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVS 638
FS SD + FGV L E+ +
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 547 NLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL--FDFGLARIFGGNQDQAATKRLV 604
N+ HR+L + EN+L + +K D+ + DFGL+ +F ++Q K +
Sbjct: 156 NIVHRDL---------KPENLL----LESKEKDALIKIVDFGLSAVF---ENQKKMKERL 199
Query: 605 GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
GT Y++PE + ++ EK DV+S GV+L +++G
Sbjct: 200 GTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L+ N+ + + DFG A++ QA VGT Y
Sbjct: 133 HRDL---------KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE E + SD+++ G ++ ++V+G
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 81/204 (39%), Gaps = 60/204 (29%)
Query: 493 ATNNFQLANK---LGQGGFGPVYK-GKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNL 548
A N+F +K LG G FG V+K + G ++A K + + +EE NE+ V++ L
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPN--------------KSLDSFLF----------- 583
H NL++L + + +L+ EY+ LD+ LF
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHM 203
Query: 584 ----------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYA 615
DFGLAR + + + K GT +++PE
Sbjct: 204 HQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY---KPREKLKVNFGTPEFLAPEVV 260
Query: 616 MEGRFSEKSDVFSFGVLLLEIVSG 639
S +D++S GV+ ++SG
Sbjct: 261 NYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L+ N+ + + DFG A++ QA VGT Y
Sbjct: 132 HRDL---------KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE E + SD+++ G ++ ++V+G
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 582 LFDFGLARIFGGNQDQAA-TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+ DFG+AR + + T ++GT Y+SPE A +SDV+S G +L E+++G
Sbjct: 157 VVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 52/196 (26%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNLQH 550
+F + LG+G FG VY + + + I A+K L K + + + EV + S+L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 551 RNLVRLLGCCVEREENMLIYEYMP---------------NKSLDSFLFDFGLA------- 588
N++RL G + LI EY P + +++ + A
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 589 RI----------------------FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS-EK 623
R+ FG + +++R L GT Y+ PE +EGR EK
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPE-MIEGRMHDEK 190
Query: 624 SDVFSFGVLLLEIVSG 639
D++S GVL E + G
Sbjct: 191 VDLWSLGVLCYEFLVG 206
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L+ N+ + + DFG A++ QA VGT Y
Sbjct: 160 HRDL---------KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 205
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE E + SD+++ G ++ ++V+G
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L+ N+ + + DFG A++ QA VGT Y
Sbjct: 153 HRDL---------KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE E + SD+++ G ++ ++V+G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L+ N+ + + DFG A++ QA VGT Y
Sbjct: 155 HRDL---------KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE E + SD+++ G ++ ++V+G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 52/196 (26%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQG---QEEFMNEVMVISNLQH 550
+F + LG+G FG VY + + + I A+K L K + + + EV + S+L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 551 RNLVRLLGCCVEREENMLIYEYMP---------------NKSLDSFLFDFGLA------- 588
N++RL G + LI EY P + +++ + A
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 589 RI----------------------FGGNQDQAATKR--LVGTYGYMSPEYAMEGRFS-EK 623
R+ FG + +++R L GT Y+ PE +EGR EK
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE-MIEGRMHDEK 190
Query: 624 SDVFSFGVLLLEIVSG 639
D++S GVL E + G
Sbjct: 191 VDLWSLGVLCYEFLVG 206
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L+ N+ + + DFG A++ QA VGT Y
Sbjct: 155 HRDL---------KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE E + SD+++ G ++ ++V+G
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L+ N+ + + DFG A++ QA VGT Y
Sbjct: 156 HRDL---------KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE E + SD+++ G ++ ++V+G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L+ N+ + + DFG A++ QA VGT Y
Sbjct: 130 HRDL---------KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE E + SD+++ G ++ ++V+G
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L+ N+ + + DFG A++ QA VGT Y
Sbjct: 153 HRDL---------KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE E + SD+++ G ++ ++V+G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L+ N+ + + DFG A++ QA VGT Y
Sbjct: 131 HRDL---------KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE E + SD+++ G ++ ++V+G
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 54/189 (28%)
Query: 502 KLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+G+G G V ++ G+ +AVK++ Q +E NEV+++ + QH N+V +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ +E ++ E++ +L DS
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 146
Query: 581 FLF---------DFGL-ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFG 630
L DFG A++ +++ K LVGT +M+PE + + D++S G
Sbjct: 147 ILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 203
Query: 631 VLLLEIVSG 639
++++E+V G
Sbjct: 204 IMVIEMVDG 212
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L+ N+ + + DFG A++ QA VGT Y
Sbjct: 155 HRDL---------KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE E + SD+++ G ++ ++V+G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L+ N+ + + DFG A++ QA VGT Y
Sbjct: 156 HRDL---------KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE E + SD+++ G ++ ++V+G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L+ N+ + + DFG A++ QA VGT Y
Sbjct: 155 HRDL---------KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE E + SD+++ G ++ ++V+G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L+ N+ + + DFG A++ QA VGT Y
Sbjct: 158 HRDL---------KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE E + SD+++ G ++ ++V+G
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L+ N+ + + DFG A++ QA VGT Y
Sbjct: 153 HRDL---------KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE E + SD+++ G ++ ++V+G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 54/189 (28%)
Query: 502 KLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+G+G G V ++ G+ +AVK++ Q +E NEV+++ + QH N+V +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ +E ++ E++ +L DS
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 150
Query: 581 FLF---------DFGL-ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFG 630
L DFG A++ +++ K LVGT +M+PE + + D++S G
Sbjct: 151 ILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 207
Query: 631 VLLLEIVSG 639
++++E+V G
Sbjct: 208 IMVIEMVDG 216
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L+ N+ + + DFG A++ QA VGT Y
Sbjct: 155 HRDL---------KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE E + SD+++ G ++ ++V+G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 563 REENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSE 622
+ EN+L+ N+ + + DFG A++ QA VGT Y+SPE E +
Sbjct: 141 KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 195
Query: 623 KSDVFSFGVLLLEIVSG 639
SD+++ G ++ ++V+G
Sbjct: 196 SSDLWALGCIIYQLVAG 212
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L+ N+ + + DFG A++ QA VGT Y
Sbjct: 153 HRDL---------KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE E + SD+++ G ++ ++V+G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 61/215 (28%)
Query: 502 KLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+G+G G V ++ G+ +AVK++ Q +E NEV+++ + QH N+V +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ +E ++ E++ +L DS
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 157
Query: 581 FLF---------DFGL-ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFG 630
L DFG A++ +++ K LVGT +M+PE + + D++S G
Sbjct: 158 ILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 214
Query: 631 VLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN 665
++++E+V G Y E L A K+ DN
Sbjct: 215 IMVIEMVDGEPP---YFNEPPLK----AMKMIRDN 242
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 73/204 (35%), Gaps = 62/204 (30%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSK---ASGQGQEEFMNEVMVISN 547
+ +L KLG G FG V +G+ +AVK L + + ++F+ EV + +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSL--------DSFLF---------------- 583
L HRNL+RL G + M + E P SL FL
Sbjct: 72 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 130
Query: 584 ---------------------------DFGLARIFGGNQDQAATK--RLVGTYGYMSPEY 614
DFGL R N D + R V + + +PE
Sbjct: 131 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPES 189
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVS 638
FS SD + FGV L E+ +
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 61/215 (28%)
Query: 502 KLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+G+G G V ++ G+ +AVK++ Q +E NEV+++ + QH N+V +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ +E ++ E++ +L DS
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 155
Query: 581 FLF---------DFGL-ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFG 630
L DFG A++ +++ K LVGT +M+PE + + D++S G
Sbjct: 156 ILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 212
Query: 631 VLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN 665
++++E+V G Y E L A K+ DN
Sbjct: 213 IMVIEMVDGEPP---YFNEPPLK----AMKMIRDN 240
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 563 REENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSE 622
+ EN+L+ N+ + + DFG A++ QA VGT Y+SPE E +
Sbjct: 156 KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 210
Query: 623 KSDVFSFGVLLLEIVSG 639
SD+++ G ++ ++V+G
Sbjct: 211 SSDLWALGCIIYQLVAG 227
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 73/204 (35%), Gaps = 62/204 (30%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSK---ASGQGQEEFMNEVMVISN 547
+ +L KLG G FG V +G+ +AVK L + + ++F+ EV + +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSL--------DSFLF---------------- 583
L HRNL+RL G + M + E P SL FL
Sbjct: 78 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 136
Query: 584 ---------------------------DFGLARIFGGNQDQAATK--RLVGTYGYMSPEY 614
DFGL R N D + R V + + +PE
Sbjct: 137 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPES 195
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVS 638
FS SD + FGV L E+ +
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 73/204 (35%), Gaps = 62/204 (30%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSK---ASGQGQEEFMNEVMVISN 547
+ +L KLG G FG V +G+ +AVK L + + ++F+ EV + +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSL--------DSFLF---------------- 583
L HRNL+RL G + M + E P SL FL
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 584 ---------------------------DFGLARIFGGNQDQAATK--RLVGTYGYMSPEY 614
DFGL R N D + R V + + +PE
Sbjct: 127 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPES 185
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVS 638
FS SD + FGV L E+ +
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 563 REENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSE 622
+ EN+L+ N+ + + DFG A++ QA VGT Y+SPE E +
Sbjct: 156 KPENILL-----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 210
Query: 623 KSDVFSFGVLLLEIVSG 639
SD+++ G ++ ++V+G
Sbjct: 211 SSDLWALGCIIYQLVAG 227
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 73/204 (35%), Gaps = 62/204 (30%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSK---ASGQGQEEFMNEVMVISN 547
+ +L KLG G FG V +G+ +AVK L + + ++F+ EV + +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSL--------DSFLF---------------- 583
L HRNL+RL G + M + E P SL FL
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 584 ---------------------------DFGLARIFGGNQDQAATK--RLVGTYGYMSPEY 614
DFGL R N D + R V + + +PE
Sbjct: 127 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPES 185
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVS 638
FS SD + FGV L E+ +
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 61/199 (30%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
+ ++G G FG VYKGK + + ++ + Q + F NEV V+ +H N++ +G
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 559 CCVERE--------ENMLIY--------------------------EYMPNKSL------ 578
+ + E +Y +Y+ KS+
Sbjct: 88 YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 147
Query: 579 --DSFLF--------DFGLA----RIFGGNQDQAATKRLVGTYGYMSPEYAM---EGRFS 621
+ FL DFGLA R G +Q ++L G+ +M+PE +S
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ----FEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 622 EKSDVFSFGVLLLEIVSGR 640
+SDV++FG++L E+++G+
Sbjct: 204 FQSDVYAFGIVLYELMTGQ 222
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 605 GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND 664
G+ +M+PE +SEK DVFS+G++L E+++ RK +E W + N
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKP----FDEIGGPAFRIMWAVHNG 220
Query: 665 NNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQ 724
PLI +E ++ C + RP+M +V ++ ++ P A +
Sbjct: 221 TR-----PPLIKNLPKPIE-----SLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE 270
Query: 725 P 725
P
Sbjct: 271 P 271
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
++ +G+G FG V K K + +++A+K++ S + + F+ E+ +S + H N+V
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIV 64
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL 582
+L G C+ L+ EY SL + L
Sbjct: 65 KLYGACL--NPVCLVMEYAEGGSLYNVL 90
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 61/215 (28%)
Query: 502 KLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+G+G G V ++ G+ +AVK++ Q +E NEV+++ + QH N+V +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ +E ++ E++ +L DS
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 277
Query: 581 FLF---------DFGL-ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFG 630
L DFG A++ +++ K LVGT +M+PE + + D++S G
Sbjct: 278 ILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 334
Query: 631 VLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN 665
++++E+V G Y E L A K+ DN
Sbjct: 335 IMVIEMVDGEPP---YFNEPPLK----AMKMIRDN 362
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 73/204 (35%), Gaps = 62/204 (30%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSK---ASGQGQEEFMNEVMVISN 547
+ +L KLG G FG V +G+ +AVK L + + ++F+ EV + +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSL--------DSFLF---------------- 583
L HRNL+RL G + M + E P SL FL
Sbjct: 72 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 130
Query: 584 ---------------------------DFGLARIFGGNQDQAATK--RLVGTYGYMSPEY 614
DFGL R N D + R V + + +PE
Sbjct: 131 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPES 189
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVS 638
FS SD + FGV L E+ +
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 61/215 (28%)
Query: 502 KLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+G+G G V ++ G+ +AVK++ Q +E NEV+++ + QH N+V +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ +E ++ E++ +L DS
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 200
Query: 581 FLF---------DFGL-ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFG 630
L DFG A++ +++ K LVGT +M+PE + + D++S G
Sbjct: 201 ILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 257
Query: 631 VLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN 665
++++E+V G Y E L A K+ DN
Sbjct: 258 IMVIEMVDGEPP---YFNEPPLK----AMKMIRDN 285
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 73/204 (35%), Gaps = 62/204 (30%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSK---ASGQGQEEFMNEVMVISN 547
+ +L KLG G FG V +G+ +AVK L + + ++F+ EV + +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSL--------DSFLF---------------- 583
L HRNL+RL G + M + E P SL FL
Sbjct: 78 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 136
Query: 584 ---------------------------DFGLARIFGGNQDQAATK--RLVGTYGYMSPEY 614
DFGL R N D + R V + + +PE
Sbjct: 137 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPES 195
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVS 638
FS SD + FGV L E+ +
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 83/209 (39%), Gaps = 64/209 (30%)
Query: 503 LGQGGFG--------PVYKGKLQDGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNL 553
LG+G FG P G G+ +AVK L + G Q + + E+ ++ L H ++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 554 VRLLGCCVEREEN--MLIYEYMPNKSLDSFL--FDFGLARIFGGNQD------------- 596
V+ GCC ++ E L+ EY+P SL +L GLA++ Q
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHY 132
Query: 597 --QAATKR----------LVGTYG-----------------------YMSPEYAMEGRFS 621
+A R +G +G + +PE E +F
Sbjct: 133 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 192
Query: 622 EKSDVFSFGVLLLEIVSGRKNTSFYHEEF 650
SDV+SFGV L E+++ + H +F
Sbjct: 193 YASDVWSFGVTLYELLTYCDSNQSPHTKF 221
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 77/200 (38%), Gaps = 57/200 (28%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQ---EEFMNEVMVISNLQHR 551
+F++ N LG+G F VY+ + + G E+A+K + K + + NEV + L+H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 552 NLVRLLG---------CCVEREENMLIYEYMPNK-------------------------- 576
+++ L +E N + Y+ N+
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 577 -------SLDSFLF---------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
+L + L DFGLA ++ T L GT Y+SPE A
Sbjct: 132 GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIATRSAH 189
Query: 621 SEKSDVFSFGVLLLEIVSGR 640
+SDV+S G + ++ GR
Sbjct: 190 GLESDVWSLGCMFYTLLIGR 209
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 61/199 (30%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
+ ++G G FG VYKGK + + ++ + Q + F NEV V+ +H N++ +G
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 559 CCVERE--------ENMLIY--------------------------EYMPNKSL------ 578
+ E +Y +Y+ KS+
Sbjct: 88 YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 147
Query: 579 --DSFLF--------DFGLA----RIFGGNQDQAATKRLVGTYGYMSPEYAM---EGRFS 621
+ FL DFGLA R G +Q ++L G+ +M+PE +S
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ----FEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 622 EKSDVFSFGVLLLEIVSGR 640
+SDV++FG++L E+++G+
Sbjct: 204 FQSDVYAFGIVLYELMTGQ 222
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 83/209 (39%), Gaps = 64/209 (30%)
Query: 503 LGQGGFG--------PVYKGKLQDGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNL 553
LG+G FG P G G+ +AVK L + G Q + + E+ ++ L H ++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 554 VRLLGCCVEREEN--MLIYEYMPNKSLDSFL--FDFGLARIFGGNQD------------- 596
V+ GCC ++ E L+ EY+P SL +L GLA++ Q
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHY 133
Query: 597 --QAATKR----------LVGTYG-----------------------YMSPEYAMEGRFS 621
+A R +G +G + +PE E +F
Sbjct: 134 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 193
Query: 622 EKSDVFSFGVLLLEIVSGRKNTSFYHEEF 650
SDV+SFGV L E+++ + H +F
Sbjct: 194 YASDVWSFGVTLYELLTYCDSNQSPHTKF 222
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRL--SKASGQGQEEFMNEVMVISNLQHRNLVRLLGC 559
+G+G +G V K + +D G+ +A+K+ S ++ M E+ ++ L+H NLV LL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 560 CVEREENMLIYEYMPNKSLDSF-LFDFGL 587
C +++ L++E++ + LD LF GL
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNGL 121
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 59/140 (42%), Gaps = 2/140 (1%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
++ +G+G FG VY G+ I + + + + + F EVM +H N+V
Sbjct: 33 EQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEY 614
+G C+ +I ++L S + D + + N+ + + +V GY+ +
Sbjct: 93 LFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI--VLDVNKTRQIAQEIVKGMGYLHAKG 150
Query: 615 AMEGRFSEKSDVFSFGVLLL 634
+ K+ + G +++
Sbjct: 151 ILHKDLKSKNVFYDNGKVVI 170
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 61/211 (28%)
Query: 503 LGQGGFGPVYKG----KLQDGQEIAVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G+G FG VY G + Q+ + A+K LS+ + Q E F+ E +++ L H N++ L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 558 GCCVERE-ENMLIYEYMPNKSLDSF------------LFDFGLARIFGG---------NQ 595
G + E ++ YM + L F L FGL G ++
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHR 148
Query: 596 DQAATKRL--------VGTYGY----MSPEY----------------AMEG----RFSEK 623
D AA + V +G + EY A+E RF+ K
Sbjct: 149 DLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTK 208
Query: 624 SDVFSFGVLLLEIVSGRKNTSFYH-EEFELT 653
SDV+SFGVLL E+++ R + H + F+LT
Sbjct: 209 SDVWSFGVLLWELLT-RGAPPYRHIDPFDLT 238
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 13/100 (13%)
Query: 496 NFQLANKLGQGGFGPVYKG-KLQDGQEIAVK-----RLSKASGQGQEEFMNEVMVISNLQ 549
N+Q+ LG+G FG V GQ++A+K L+K+ QG+ E E+ + L+
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 62
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLAR 589
H ++++L ++E +++ EY N+ LFD+ + R
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQR 97
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 79/211 (37%), Gaps = 64/211 (30%)
Query: 487 FEELANATNNFQLANKLGQGGFGPVYKGKLQD-----GQEIAVKRLSKASGQGQEEFMNE 541
FEE + + ++LG+G FG V + G +AVK+L + Q +F E
Sbjct: 7 FEE-----RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE 61
Query: 542 VMVISNLQHRNLVRLLGCCVE--REENMLIYEYMPNKSLDSFL----------------- 582
+ ++ L +V+ G R+ L+ EY+P+ L FL
Sbjct: 62 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS 121
Query: 583 ----------------------------------FDFGLARIFGGNQDQAATKRL-VGTY 607
DFGLA++ ++D +
Sbjct: 122 QICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI 181
Query: 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ +PE + FS +SDV+SFGV+L E+ +
Sbjct: 182 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 496 NFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSK---ASGQGQEEFMNEVMVISNLQHR 551
N+Q+ LG+G FG V GQ++A+K ++K A Q E+ + L+H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLAR 589
++++L ++E +++ EY N+ LFD+ + R
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQR 106
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 79/211 (37%), Gaps = 64/211 (30%)
Query: 487 FEELANATNNFQLANKLGQGGFGPVYKGKLQD-----GQEIAVKRLSKASGQGQEEFMNE 541
FEE + + ++LG+G FG V + G +AVK+L + Q +F E
Sbjct: 8 FEE-----RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE 62
Query: 542 VMVISNLQHRNLVRLLGCCVE--REENMLIYEYMPNKSLDSFL----------------- 582
+ ++ L +V+ G R+ L+ EY+P+ L FL
Sbjct: 63 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS 122
Query: 583 ----------------------------------FDFGLARIFGGNQDQAATKRL-VGTY 607
DFGLA++ ++D +
Sbjct: 123 QICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI 182
Query: 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ +PE + FS +SDV+SFGV+L E+ +
Sbjct: 183 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 13/100 (13%)
Query: 496 NFQLANKLGQGGFGPVYKG-KLQDGQEIAVK-----RLSKASGQGQEEFMNEVMVISNLQ 549
N+Q+ LG+G FG V GQ++A+K L+K+ QG+ E E+ + L+
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 66
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLAR 589
H ++++L ++E +++ EY N+ LFD+ + R
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQR 101
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 79/211 (37%), Gaps = 64/211 (30%)
Query: 487 FEELANATNNFQLANKLGQGGFGPVYKGKLQD-----GQEIAVKRLSKASGQGQEEFMNE 541
FEE + + ++LG+G FG V + G +AVK+L + Q +F E
Sbjct: 20 FEE-----RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE 74
Query: 542 VMVISNLQHRNLVRLLGCCVE--REENMLIYEYMPNKSLDSFL----------------- 582
+ ++ L +V+ G R+ L+ EY+P+ L FL
Sbjct: 75 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS 134
Query: 583 ----------------------------------FDFGLARIFGGNQDQAATKRL-VGTY 607
DFGLA++ ++D +
Sbjct: 135 QICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI 194
Query: 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ +PE + FS +SDV+SFGV+L E+ +
Sbjct: 195 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 13/100 (13%)
Query: 496 NFQLANKLGQGGFGPVYKG-KLQDGQEIAVK-----RLSKASGQGQEEFMNEVMVISNLQ 549
N+Q+ LG+G FG V GQ++A+K L+K+ QG+ E E+ + L+
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 72
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLAR 589
H ++++L ++E +++ EY N+ LFD+ + R
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQR 107
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 58/195 (29%)
Query: 499 LAN--KLGQGGFGPV-YKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
LAN K+G+G G V + G+++AVK++ Q +E NEV+++ + H N+V
Sbjct: 47 LANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVD 106
Query: 556 LLGCCVEREENMLIYEYMPNKSL------------------------------------- 578
+ + +E ++ E++ +L
Sbjct: 107 MYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRD 166
Query: 579 ---DSFLF---------DFGLARIFGGNQDQAATKR--LVGTYGYMSPEYAMEGRFSEKS 624
DS L DFG F + KR LVGT +M+PE + +
Sbjct: 167 IKSDSILLTSDGRIKLSDFG----FCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 625 DVFSFGVLLLEIVSG 639
D++S G++++E++ G
Sbjct: 223 DIWSLGIMVIEMIDG 237
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 65/217 (29%)
Query: 503 LGQGGFG--------PVYKGKLQDGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNL 553
LG+G FG P G G+ +AVK L G Q + + E+ ++ L H ++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 554 VRLLGCCVEREEN--MLIYEYMPNKSLDSFL--FDFGLARIFGGNQ-------------- 595
++ GCC ++ E L+ EY+P SL +L GLA++ Q
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHY 138
Query: 596 ---DQAATKRL--------VGTYG-----------------------YMSPEYAMEGRFS 621
+ AA L +G +G + +PE E +F
Sbjct: 139 IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFY 198
Query: 622 EKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA 658
SDV+SFGV L E+++ ++ +F L L+G A
Sbjct: 199 YASDVWSFGVTLYELLTHCDSSQSPPTKF-LELIGIA 234
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 65/217 (29%)
Query: 503 LGQGGFG--------PVYKGKLQDGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNL 553
LG+G FG P G G+ +AVK L G Q + + E+ ++ L H ++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 554 VRLLGCCVEREEN--MLIYEYMPNKSLDSFL--FDFGLARIFGGNQ-------------- 595
++ GCC ++ E L+ EY+P SL +L GLA++ Q
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHY 138
Query: 596 ---DQAATKRL--------VGTYG-----------------------YMSPEYAMEGRFS 621
+ AA L +G +G + +PE E +F
Sbjct: 139 IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFY 198
Query: 622 EKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA 658
SDV+SFGV L E+++ ++ +F L L+G A
Sbjct: 199 YASDVWSFGVTLYELLTHCDSSQSPPTKF-LELIGIA 234
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 492 NATNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEF-MNEVMVISNLQ 549
++++ F+ KLG G + VYKG G +A+K + S +G + E+ ++ L+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPN---KSLDS 580
H N+VRL + L++E+M N K +DS
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDS 95
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 563 REENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR-FS 621
+ +N+LI NK L DFGLAR FG + +++ V T Y +P+ M R +S
Sbjct: 135 KPQNLLI-----NKRGQLKLGDFGLARAFGIPVNTFSSE--VVTLWYRAPDVLMGSRTYS 187
Query: 622 EKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLL 655
D++S G +L E+++G+ ++E +L L+
Sbjct: 188 TSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 22/136 (16%)
Query: 509 GPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE---E 565
G VY G + I+ KR S+ + +V+ H+N + V R+ E
Sbjct: 105 GEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYXHKNKI------VHRDLKPE 155
Query: 566 NMLIYEYMPNKSLDS--FLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEK 623
N+L + +KS D+ + DFGL+ F ++ K +GT Y++PE + G + EK
Sbjct: 156 NLL----LESKSKDANIRIIDFGLSTHFEASK---KXKDKIGTAYYIAPE-VLHGTYDEK 207
Query: 624 SDVFSFGVLLLEIVSG 639
DV+S GV+L ++SG
Sbjct: 208 CDVWSTGVILYILLSG 223
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
N LG G FG V + K +AVK L ++ + E M+E+ V+S
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 548 L-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
L H N+V LLG C ++I EY L +FL
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 118
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + + +M+PE ++ +SDV+S+G+ L E+ S
Sbjct: 188 DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 72/199 (36%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 186 AEPVDVWSCGIVLTAMLAG 204
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKG-----KLQDG-QEIAVKRLSK-ASGQGQEEFMNEVMVISN 547
N L LG+G FG V K K + G +AVK L + AS + ++E V+
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ H ++++L G C + +LI EY SL FL
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 584 DFGLARIFGGNQDQAATKRLVG--TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGL+R ++ + KR G +M+ E + ++ +SDV+SFGVLL EIV+
Sbjct: 193 DFGLSRDV--YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKG-----KLQDG-QEIAVKRLSK-ASGQGQEEFMNEVMVISN 547
N L LG+G FG V K K + G +AVK L + AS + ++E V+
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ H ++++L G C + +LI EY SL FL
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 584 DFGLARIFGGNQDQAATKRLVG--TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGL+R ++ + KR G +M+ E + ++ +SDV+SFGVLL EIV+
Sbjct: 193 DFGLSRDV--YEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKG-----KLQDG-QEIAVKRLSK-ASGQGQEEFMNEVMVISN 547
N L LG+G FG V K K + G +AVK L + AS + ++E V+
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ H ++++L G C + +LI EY SL FL
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 584 DFGLARIFGGNQDQAATKRLVG--TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGL+R ++ + KR G +M+ E + ++ +SDV+SFGVLL EIV+
Sbjct: 193 DFGLSRDV--YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 186 AEPVDVWSCGIVLTAMLAG 204
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 22/136 (16%)
Query: 509 GPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE---E 565
G VY G + I+ KR S+ + +V+ H+N + V R+ E
Sbjct: 111 GEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMHKNKI------VHRDLKPE 161
Query: 566 NMLIYEYMPNKSLDS--FLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEK 623
N+L + +KS D+ + DFGL+ F ++ K +GT Y++PE + G + EK
Sbjct: 162 NLL----LESKSKDANIRIIDFGLSTHFEASK---KMKDKIGTAYYIAPE-VLHGTYDEK 213
Query: 624 SDVFSFGVLLLEIVSG 639
DV+S GV+L ++SG
Sbjct: 214 CDVWSTGVILYILLSG 229
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 80/195 (41%), Gaps = 63/195 (32%)
Query: 503 LGQGGFGPVY--KGKLQDGQEIAVKRLSK---ASGQGQEEFMNEVMVISNLQHRNLV--- 554
LG+G FG V K K+ GQE AVK +SK +E + EV ++ L H N++
Sbjct: 57 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 555 -----------------------------------------RLLGCCVEREENMLIYE-- 571
++L +N +++
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 175
Query: 572 -----YMPNKSLDS--FLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS 624
+ +KS D+ + DFGL+ F ++ K +GT Y++PE + G + EK
Sbjct: 176 KPENLLLESKSKDANIRIIDFGLSTHFEASK---KMKDKIGTAYYIAPE-VLHGTYDEKC 231
Query: 625 DVFSFGVLLLEIVSG 639
DV+S GV+L ++SG
Sbjct: 232 DVWSTGVILYILLSG 246
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
N LG G FG V + K +AVK L ++ + E M+E+ V+S
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 548 L-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
L H N+V LLG C ++I EY L +FL
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 141
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + + +M+PE ++ +SDV+S+G+ L E+ S
Sbjct: 211 DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
N LG G FG V + K +AVK L ++ + E M+E+ V+S
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 548 L-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
L H N+V LLG C ++I EY L +FL
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 136
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + + +M+PE ++ +SDV+S+G+ L E+ S
Sbjct: 206 DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
N LG G FG V + K +AVK L ++ + E M+E+ V+S
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 548 L-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
L H N+V LLG C ++I EY L +FL
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 141
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + + +M+PE ++ +SDV+S+G+ L E+ S
Sbjct: 211 DFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
N LG G FG V + K +AVK L ++ + E M+E+ V+S
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 548 L-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
L H N+V LLG C ++I EY L +FL
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 134
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + + +M+PE ++ +SDV+S+G+ L E+ S
Sbjct: 204 DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 72/202 (35%), Gaps = 53/202 (26%)
Query: 491 ANATNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNL 548
A ++ L LG+G +G V + +E +AVK + K + E E+ + L
Sbjct: 1 APFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 60
Query: 549 QHRNLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF---------- 583
H N+V+ G E L EY MP F
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLA +F N + ++ GT Y++PE
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 619 RF-SEKSDVFSFGVLLLEIVSG 639
F +E DV+S G++L +++G
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAG 202
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 80/195 (41%), Gaps = 63/195 (32%)
Query: 503 LGQGGFGPVY--KGKLQDGQEIAVKRLSK---ASGQGQEEFMNEVMVISNLQHRNLV--- 554
LG+G FG V K K+ GQE AVK +SK +E + EV ++ L H N++
Sbjct: 58 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 555 -----------------------------------------RLLGCCVEREENMLIYE-- 571
++L +N +++
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 176
Query: 572 -----YMPNKSLDS--FLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS 624
+ +KS D+ + DFGL+ F ++ K +GT Y++PE + G + EK
Sbjct: 177 KPENLLLESKSKDANIRIIDFGLSTHFEASK---KMKDKIGTAYYIAPE-VLHGTYDEKC 232
Query: 625 DVFSFGVLLLEIVSG 639
DV+S GV+L ++SG
Sbjct: 233 DVWSTGVILYILLSG 247
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 71/205 (34%)
Query: 502 KLGQGGFGPVYKGKLQDGQ-EIAVKRLSKAS-------------GQGQEEFMNEVMVISN 547
KLG G +G V K ++G E A+K + K+ + EE NE+ ++ +
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 548 LQHRNLVRLL---------------------------------------------GCCVE 562
L H N+++L G C
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYL 162
Query: 563 REENMLIYEYMP--------NKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEY 614
+ N++ + P N L+ + DFGL+ F ++D RL GT Y++PE
Sbjct: 163 HKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF--SKDYKLRDRL-GTAYYIAPE- 218
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVSG 639
++ +++EK DV+S GV++ ++ G
Sbjct: 219 VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 501 NKLGQGGFGPVYKG--KLQDGQEIAVKRLSKASGQGQE-EFMNEVMVISNLQHRNLVRLL 557
+KLG+G + VYKG KL D +A+K + +G + EV ++ +L+H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 558 GCCVEREENMLIYEYMPNKSLDSFLFDFG 586
+ L++EY+ +K L +L D G
Sbjct: 67 DIIHTEKSLTLVFEYL-DKDLKQYLDDCG 94
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 33/201 (16%)
Query: 440 FAWRWFAKRKAMKENSKVQRLDLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQL 499
FA + +KR ++ L L E + N K++ L F EL N F+
Sbjct: 39 FAVKIISKRMEANTQKEITALKLCEGHPNIV--KLHEVFHDQLHTFLVMELLNGGELFER 96
Query: 500 ANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGC 559
K + F + I K +S S M++V V+ HR+L
Sbjct: 97 IKK--KKHFSET------EASYIMRKLVSAVS------HMHDVGVV----HRDL------ 132
Query: 560 CVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR 619
+ EN+L + N +L+ + DFG AR+ D K T Y +PE +
Sbjct: 133 ---KPENLLFTD--ENDNLEIKIIDFGFARL--KPPDNQPLKTPCFTLHYAAPELLNQNG 185
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
+ E D++S GV+L ++SG+
Sbjct: 186 YDESCDLWSLGVILYTMLSGQ 206
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 22/136 (16%)
Query: 509 GPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE---E 565
G VY G + I+ KR S+ + +V+ H+N + V R+ E
Sbjct: 105 GEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMHKNKI------VHRDLKPE 155
Query: 566 NMLIYEYMPNKSLDS--FLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEK 623
N+L + +KS D+ + DFGL+ F ++ K +GT Y++PE + G + EK
Sbjct: 156 NLL----LESKSKDANIRIIDFGLSTHFEASK---KMKDKIGTAYYIAPE-VLHGTYDEK 207
Query: 624 SDVFSFGVLLLEIVSG 639
DV+S GV+L ++SG
Sbjct: 208 CDVWSTGVILYILLSG 223
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 186 AEPVDVWSCGIVLTAMLAG 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 186 AEPVDVWSCGIVLTAMLAG 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 186 AEPVDVWSCGIVLTAMLAG 204
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 17/123 (13%)
Query: 497 FQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQ-HR 551
++L KLG+G +G V+K + G+ +AVK++ A S Q F E+M+++ L H
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHE 69
Query: 552 NLVRLLGCCVEREEN----MLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTY 607
N+V LL V R +N L+++YM ++ L A I Q +L+
Sbjct: 70 NIVNLLN--VLRADNDRDVYLVFDYM-----ETDLHAVIRANILEPVHKQYVVYQLIKVI 122
Query: 608 GYM 610
Y+
Sbjct: 123 KYL 125
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 58/193 (30%)
Query: 503 LGQGGFGPVYKGK-LQDGQ----EIAVKRLSK-ASGQGQEEFMNEVMVISNLQHRNLVRL 556
LG G FG VYKG + DG+ +A+K L + S + +E ++E V++ + + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 557 LGCCVEREENMLIYEYMPNKSL--------------------------DSFLFD------ 584
LG C+ L+ + MP L S+L D
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHR 143
Query: 585 -------------------FGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSD 625
FGLAR+ ++ + +M+ E + RF+ +SD
Sbjct: 144 DLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSD 203
Query: 626 VFSFGVLLLEIVS 638
V+S+GV + E+++
Sbjct: 204 VWSYGVTVWELMT 216
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 75/197 (38%), Gaps = 56/197 (28%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSKASGQG-QEEFMNEVMVISNLQH 550
+L +G+G FG V++G + +A+K + +E+F+ E + + H
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 551 RNLVRLLGCCVERE--------------------------ENMLIYEYMPNKSLDSF--- 581
++V+L+G E ++++Y Y + +L
Sbjct: 71 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK 130
Query: 582 ---------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
L DFGL+R + A+K + +M+PE RF
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL-PIKWMAPESINFRRF 189
Query: 621 SEKSDVFSFGVLLLEIV 637
+ SDV+ FGV + EI+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 475 NPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG 534
+PAR D + + L + F+L +G G +G VYKG+ ++A ++ +G
Sbjct: 6 SPARSLDEI--DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE 63
Query: 535 QEEFMNEV-MVISNLQHRNLVRLLGCCVER 563
+EE E+ M+ HRN+ G +++
Sbjct: 64 EEEIKQEINMLKKYSHHRNIATYYGAFIKK 93
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 78/197 (39%), Gaps = 64/197 (32%)
Query: 503 LGQGGFG--------PVYKGKLQDGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNL 553
LG+G FG P G G+ +AVK L +G Q + + E+ ++ L H ++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 554 VRLLGCCVE--REENMLIYEYMPNKSLDSFL--FDFGLARIFGGNQ-------------- 595
++ GCC + L+ EY+P SL +L GLA++ Q
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHY 155
Query: 596 ---DQAATKRL--------VGTYG-----------------------YMSPEYAMEGRFS 621
D AA L +G +G + +PE E +F
Sbjct: 156 IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFY 215
Query: 622 EKSDVFSFGVLLLEIVS 638
SDV+SFGV L E+++
Sbjct: 216 YASDVWSFGVTLYELLT 232
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 186 AEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 186 AEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 53/199 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLS-KASGQGQEEFMNEVMVISNLQHR 551
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 552 NLVRLLGCCVEREENMLIYEY---------------MPNKSLDSFLF------------- 583
N+V+ G E L EY MP F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLA +F N + ++ GT Y++PE F
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+E DV+S G++L +++G
Sbjct: 186 AEPVDVWSCGIVLTAMLAG 204
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 479 LQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKL--QDGQ--EIAVKRLSK--ASG 532
+ D L E++ F L LG+G FG V + +L +DG ++AVK L +
Sbjct: 7 ISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS 66
Query: 533 QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREEN------MLIYEYMPNKSLDSFLF 583
EEF+ E + H ++ +L+G + M+I +M + L +FL
Sbjct: 67 SDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLL 123
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF-SEKSDVFSFGVLLLEIVSG 639
DFGLA +F N + ++ GT Y++PE F +E DV+S G++L +++G
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR N D +M+PE + +S KSDV+S+GVLL EI S
Sbjct: 242 DFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 493 ATNNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSK-ASGQGQEEFMNEVMVI 545
A +L LG+G FG V + K + +AVK L + A+ + M E+ ++
Sbjct: 25 ARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKIL 84
Query: 546 SNL-QHRNLVRLLGCCVER-EENMLIYEYMPNKSLDSFL 582
+++ H N+V LLG C ++ M+I EY +L ++L
Sbjct: 85 THIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 100/257 (38%), Gaps = 77/257 (29%)
Query: 475 NPARLQ------DLLVFNFEELANATNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRL 527
NP R Q D L EE+ F + KLG+G +G VYK + GQ +A+K++
Sbjct: 9 NPPRRQLKKLDEDSLTKQPEEV------FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV 62
Query: 528 SKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY-----------MPNK 576
S +E + E+ ++ ++V+ G + + ++ EY + NK
Sbjct: 63 PVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK 120
Query: 577 SL----------------------------------------DSFLFDFGLARIFGGNQD 596
+L + L DFG+A G D
Sbjct: 121 TLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVA---GQLTD 177
Query: 597 QAATK-RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLL 655
A + ++GT +M+PE E ++ +D++S G+ +E+ G+ + H + ++
Sbjct: 178 XMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI 237
Query: 656 G-------YAWKLWNDN 665
+LW+DN
Sbjct: 238 PTNPPPTFRKPELWSDN 254
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 494 TNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLS--KASGQGQEEFMNEVMVISNLQH 550
T+ +QL +LG+G F V + K+ GQE A K ++ K S + ++ E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 551 RNLVRLLGCCVEREENMLIYEYM 573
N+VRL E + L+++ +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLV 85
Score = 35.8 bits (81), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLV 604
++ + HR+L + EN+L+ +K L DFGLA G DQ A
Sbjct: 121 LNGIVHRDL---------KPENLLLAS--KSKGAAVKLADFGLAIEVQG--DQQAWFGFA 167
Query: 605 GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
GT GY+SPE + + + D+++ GV+L ++ G
Sbjct: 168 GTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 503 LGQGGFGPVYKGK-LQDGQEI----AVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRL 556
LG G FG V+KG + +G+ I +K + SG Q + + ++ I +L H ++VRL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 557 LGCCVEREENMLIYEYMPNKSL 578
LG C L+ +Y+P SL
Sbjct: 81 LGLC-PGSSLQLVTQYLPLGSL 101
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 75/197 (38%), Gaps = 56/197 (28%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSKASGQG-QEEFMNEVMVISNLQH 550
+L +G+G FG V++G + +A+K + +E+F+ E + + H
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 551 RNLVRLLGCCVERE--------------------------ENMLIYEYMPNKSLDSF--- 581
++V+L+G E ++++Y Y + +L
Sbjct: 71 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 130
Query: 582 ---------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
L DFGL+R + A+K + +M+PE RF
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 189
Query: 621 SEKSDVFSFGVLLLEIV 637
+ SDV+ FGV + EI+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+LI N + D + DFGLARI D V
Sbjct: 163 ANVLHRDL---------KPSNLLI-----NTTCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 503 LGQGGFGPVYKGK-LQDGQEI----AVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRL 556
LG G FG V+KG + +G+ I +K + SG Q + + ++ I +L H ++VRL
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 557 LGCCVEREENMLIYEYMPNKSL 578
LG C L+ +Y+P SL
Sbjct: 99 LGLC-PGSSLQLVTQYLPLGSL 119
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 494 TNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLS--KASGQGQEEFMNEVMVISNLQH 550
T+ +QL +LG+G F V + K+ GQE A K ++ K S + ++ E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSL 578
N+VRL E + L+++ + L
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL 90
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLV 604
++ + HR+L + EN+L+ +K L DFGLA G DQ A
Sbjct: 121 LNGIVHRDL---------KPENLLLAS--KSKGAAVKLADFGLAIEVQG--DQQAWFGFA 167
Query: 605 GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
GT GY+SPE + + + D+++ GV+L ++ G
Sbjct: 168 GTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 75/197 (38%), Gaps = 56/197 (28%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSKASGQG-QEEFMNEVMVISNLQH 550
+L +G+G FG V++G + +A+K + +E+F+ E + + H
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 551 RNLVRLLGCCVERE--------------------------ENMLIYEYMPNKSLDSF--- 581
++V+L+G E ++++Y Y + +L
Sbjct: 71 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 130
Query: 582 ---------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
L DFGL+R + A+K + +M+PE RF
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 189
Query: 621 SEKSDVFSFGVLLLEIV 637
+ SDV+ FGV + EI+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 26/130 (20%)
Query: 537 EFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY------------------------ 572
E M +V ++ +L +L +LL C +++ + Y
Sbjct: 100 EQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 159
Query: 573 MPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLVGTYGYMSPEYAMEGR-FSEKSDVFSFG 630
+ N + D + DFGLAR+ + D V T Y +PE + + +++ D++S G
Sbjct: 160 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 631 VLLLEIVSGR 640
+L E++S R
Sbjct: 220 CILAEMLSNR 229
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 75/198 (37%), Gaps = 56/198 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSKASGQG-QEEFMNEVMVISNLQ 549
+L +G+G FG V++G + +A+K + +E+F+ E + +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 550 HRNLVRLLGCCVERE--------------------------ENMLIYEYMPNKSLDSF-- 581
H ++V+L+G E ++++Y Y + +L
Sbjct: 70 HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 129
Query: 582 ----------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR 619
L DFGL+R + A+K + +M+PE R
Sbjct: 130 KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRR 188
Query: 620 FSEKSDVFSFGVLLLEIV 637
F+ SDV+ FGV + EI+
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 75/198 (37%), Gaps = 56/198 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSKASGQG-QEEFMNEVMVISNLQ 549
+L +G+G FG V++G + +A+K + +E+F+ E + +
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 550 HRNLVRLLGCCVERE--------------------------ENMLIYEYMPNKSLDSF-- 581
H ++V+L+G E ++++Y Y + +L
Sbjct: 67 HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 126
Query: 582 ----------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR 619
L DFGL+R + A+K + +M+PE R
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRR 185
Query: 620 FSEKSDVFSFGVLLLEIV 637
F+ SDV+ FGV + EI+
Sbjct: 186 FTSASDVWMFGVCMWEIL 203
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 75/197 (38%), Gaps = 56/197 (28%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSKASGQG-QEEFMNEVMVISNLQH 550
+L +G+G FG V++G + +A+K + +E+F+ E + + H
Sbjct: 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 75
Query: 551 RNLVRLLGCCVERE--------------------------ENMLIYEYMPNKSLDSF--- 581
++V+L+G E ++++Y Y + +L
Sbjct: 76 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 135
Query: 582 ---------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
L DFGL+R + A+K + +M+PE RF
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 194
Query: 621 SEKSDVFSFGVLLLEIV 637
+ SDV+ FGV + EI+
Sbjct: 195 TSASDVWMFGVCMWEIL 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 75/196 (38%), Gaps = 56/196 (28%)
Query: 497 FQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSKASGQG-QEEFMNEVMVISNLQHR 551
+L +G+G FG V++G + +A+K + +E+F+ E + + H
Sbjct: 40 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 99
Query: 552 NLVRLLGCCVERE--------------------------ENMLIYEYMPNKSLDSF---- 581
++V+L+G E ++++Y Y + +L
Sbjct: 100 HIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 159
Query: 582 --------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
L DFGL+R + A+K + +M+PE RF+
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRFT 218
Query: 622 EKSDVFSFGVLLLEIV 637
SDV+ FGV + EI+
Sbjct: 219 SASDVWMFGVCMWEIL 234
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 83/208 (39%), Gaps = 69/208 (33%)
Query: 497 FQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLV 554
+++ +LG GGFG V + QD G+++A+K+ + S + +E + E+ ++ L H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 555 -----------------------------------RLLGCCVERE--------------- 564
+ CC +E
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 565 ---ENMLIYEYM----------PNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMS 611
EN +I+ + P + + + D G A+ +Q + T+ VGT Y++
Sbjct: 136 YLHENRIIHRDLKPENIVLQPGPQRLIHKII-DLGYAKEL--DQGELCTE-FVGTLQYLA 191
Query: 612 PEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
PE + +++ D +SFG L E ++G
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 75/197 (38%), Gaps = 56/197 (28%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSKASGQG-QEEFMNEVMVISNLQH 550
+L +G+G FG V++G + +A+K + +E+F+ E + + H
Sbjct: 13 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 72
Query: 551 RNLVRLLGCCVERE--------------------------ENMLIYEYMPNKSLDSF--- 581
++V+L+G E ++++Y Y + +L
Sbjct: 73 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 132
Query: 582 ---------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
L DFGL+R + A+K + +M+PE RF
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 191
Query: 621 SEKSDVFSFGVLLLEIV 637
+ SDV+ FGV + EI+
Sbjct: 192 TSASDVWMFGVCMWEIL 208
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 83/208 (39%), Gaps = 69/208 (33%)
Query: 497 FQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLV 554
+++ +LG GGFG V + QD G+++A+K+ + S + +E + E+ ++ L H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 555 -----------------------------------RLLGCCVERE--------------- 564
+ CC +E
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 565 ---ENMLIYEYM----------PNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMS 611
EN +I+ + P + + + D G A+ +Q + T+ VGT Y++
Sbjct: 137 YLHENRIIHRDLKPENIVLQPGPQRLIHKII-DLGYAKEL--DQGELCTE-FVGTLQYLA 192
Query: 612 PEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
PE + +++ D +SFG L E ++G
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 143 ANVLHRDL---------KPSNLLL-----NTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 75/197 (38%), Gaps = 56/197 (28%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQ----EIAVKRLSKASGQG-QEEFMNEVMVISNLQH 550
+L +G+G FG V++G + +A+K + +E+F+ E + + H
Sbjct: 14 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 73
Query: 551 RNLVRLLGCCVERE--------------------------ENMLIYEYMPNKSLDSF--- 581
++V+L+G E ++++Y Y + +L
Sbjct: 74 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 133
Query: 582 ---------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
L DFGL+R + A+K + +M+PE RF
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRF 192
Query: 621 SEKSDVFSFGVLLLEIV 637
+ SDV+ FGV + EI+
Sbjct: 193 TSASDVWMFGVCMWEIL 209
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 82/206 (39%), Gaps = 67/206 (32%)
Query: 494 TNNFQLANKLGQGGFGPVY--KGKLQDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNL 548
++ +Q KLG G +G V K KL G E A+K + K+S ++EV V+ L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 549 QHRNLVR---------------------------------------------LLGCCVER 563
H N+++ L G
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 138
Query: 564 EENMLIYEYMP------NKSLDSFL--FDFGLARIF--GGNQDQAATKRLVGTYGYMSPE 613
+ N++ + P +KS D+ + DFGL+ F GG K +GT Y++PE
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK-----MKERLGTAYYIAPE 193
Query: 614 YAMEGRFSEKSDVFSFGVLLLEIVSG 639
+ ++ EK DV+S GV+L ++ G
Sbjct: 194 -VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFG++ G + VGT YMSPE +S +SD++S G+ L+E+ GR
Sbjct: 146 LCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 145 ANVLHRDL---------KPSNLLL-----NTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 148 ANVLHRDL---------KPSNLLL-----NTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 149 ANVLHRDL---------KPSNLLL-----NTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 140 ANVLHRDL---------KPSNLLL-----NTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 147 ANVLHRDL---------KPSNLLL-----NTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 143 ANVLHRDL---------KPSNLLL-----NTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFG++ G + VGT YMSPE +S +SD++S G+ L+E+ GR
Sbjct: 208 LCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 143 ANVLHRDL---------KPSNLLL-----NTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 145 ANVLHRDL---------KPSNLLL-----NTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFG++ G + VGT YMSPE +S +SD++S G+ L+E+ GR
Sbjct: 146 LCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 147 ANVLHRDL---------KPSNLLL-----NTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 148 ANVLHRDL---------KPSNLLL-----NTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 147 ANVLHRDL---------KPSNLLL-----NTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFG++ G + VGT YMSPE +S +SD++S G+ L+E+ GR
Sbjct: 146 LCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 151 ANVLHRDL---------KPSNLLL-----NTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 143 ANVLHRDL---------KPSNLLL-----NTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 147 ANVLHRDL---------KPSNLLL-----NTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 141 ANVLHRDL---------KPSNLLL-----NTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 82/206 (39%), Gaps = 67/206 (32%)
Query: 494 TNNFQLANKLGQGGFGPVY--KGKLQDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNL 548
++ +Q KLG G +G V K KL G E A+K + K+S ++EV V+ L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 549 QHRNLVR---------------------------------------------LLGCCVER 563
H N+++ L G
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 121
Query: 564 EENMLIYEYMP------NKSLDSFL--FDFGLARIF--GGNQDQAATKRLVGTYGYMSPE 613
+ N++ + P +KS D+ + DFGL+ F GG K +GT Y++PE
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK-----MKERLGTAYYIAPE 176
Query: 614 YAMEGRFSEKSDVFSFGVLLLEIVSG 639
+ ++ EK DV+S GV+L ++ G
Sbjct: 177 -VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 141 ANVLHRDL---------KPSNLLL-----NTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 21/131 (16%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRK 641
L DFG+AR+ + A + +GT Y+SPE ++ KSD+++ G +L
Sbjct: 166 LGDFGIARVLNSTVELA--RACIGTPYYLSPEICENKPYNNKSDIWALGCVL-------- 215
Query: 642 NTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKD 701
+EL L +A++ + N LV +IS S + + ++ L Q F ++
Sbjct: 216 --------YELCTLKHAFEAGSMKN---LVLKIISGSFPPVSLHYSYDLRSLVSQLFKRN 264
Query: 702 RPNMPTVVSML 712
+ P+V S+L
Sbjct: 265 PRDRPSVNSIL 275
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 163 ANVLHRDL---------KPSNLLL-----NTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFG++ G + VGT YMSPE +S +SD++S G+ L+E+ GR
Sbjct: 146 LCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFG++ G + VGT YMSPE +S +SD++S G+ L+E+ GR
Sbjct: 146 LCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 495 NNFQLANKLGQGGFGPVYK-GKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNL 553
+++ + +LG G FG V++ + G A K + +E E+ +S L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 554 VRLLGCCVEREENMLIYEYM 573
V L + E ++IYE+M
Sbjct: 111 VNLHDAFEDDNEMVMIYEFM 130
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFG++ G + VGT YMSPE +S +SD++S G+ L+E+ GR
Sbjct: 173 LCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 147 ANVLHRDL---------KPSNLLL-----NTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 143 ANVLHRDL---------KPSNLLL-----NTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 495 NNFQLANKLGQGGFGPVYK-GKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNL 553
+++ + +LG G FG V++ + G A K + +E E+ +S L+H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 554 VRLLGCCVEREENMLIYEYM 573
V L + E ++IYE+M
Sbjct: 217 VNLHDAFEDDNEMVMIYEFM 236
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFG++ G + VGT YMSPE +S +SD++S G+ L+E+ GR
Sbjct: 165 LCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 163 ANVLHRDL---------KPSNLLL-----NTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFG++ G D+ A + VGT YMSPE +S +SD++S G+ L+E+ GR
Sbjct: 149 LCDFGVS---GQLIDEMANE-FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 62/201 (30%)
Query: 497 FQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLS--KASGQGQEEFMNEVMVISNLQHRNL 553
+QL +LG+G F V + K+ GQE A K ++ K S + ++ E + L+H N+
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 554 VR------------------------------------------------LLGC----CV 561
VR +L C V
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVV 143
Query: 562 ERE---ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
R+ EN+L+ + ++ L DFGLA G +Q A GT GY+SPE +
Sbjct: 144 HRDLKPENLLLASKLKGAAVK--LADFGLAIEVEG--EQQAWFGFAGTPGYLSPEVLRKD 199
Query: 619 RFSEKSDVFSFGVLLLEIVSG 639
+ + D+++ GV+L ++ G
Sbjct: 200 PYGKPVDLWACGVILYILLVG 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRN 552
++F+ LGQG FG V K + D + A+K++ + + + ++EVM++++L H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQY 63
Query: 553 LVRLLGCCVER 563
+VR +ER
Sbjct: 64 VVRYYAAWLER 74
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEI-AVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
++ K+G+G +G V+K K ++ EI A+K RL + E+ ++ L+H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 552 NLVRLLGCCVEREENMLIYEY 572
N+VRL ++ L++E+
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEF 82
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRN 552
++F+ LGQG FG V K + D + A+K++ + + + ++EVM++++L H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQY 63
Query: 553 LVRLLGCCVER 563
+VR +ER
Sbjct: 64 VVRYYAAWLER 74
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRLSK-ASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++ +AVK L A+ + + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYL 132
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVL+ EI +
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 75/196 (38%), Gaps = 56/196 (28%)
Query: 497 FQLANKLGQGGFGPVYKGKLQDGQE----IAVKRLSKASGQG-QEEFMNEVMVISNLQHR 551
+L +G+G FG V++G + +A+K + +E+F+ E + + H
Sbjct: 392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 552 NLVRLLGCCVERE--------------------------ENMLIYEYMPNKSLDSF---- 581
++V+L+G E ++++Y Y + +L
Sbjct: 452 HIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 511
Query: 582 --------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
L DFGL+R + A+K + +M+PE RF+
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRFT 570
Query: 622 EKSDVFSFGVLLLEIV 637
SDV+ FGV + EI+
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSG--- 639
D GLA F + A+ VGT+GYM+PE +G + +D FS G +L +++ G
Sbjct: 335 DLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
Query: 640 --RKNTSFYHEEFELTL 654
+ T HE +TL
Sbjct: 391 FRQHKTKDKHEIDRMTL 407
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKAS---GQGQEEFMNEVMVIS 546
N+F + +G+GGFG VY + D G+ A+K L K QG+ +NE +++S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSG--- 639
D GLA F + A+ VGT+GYM+PE +G + +D FS G +L +++ G
Sbjct: 335 DLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
Query: 640 --RKNTSFYHEEFELTL 654
+ T HE +TL
Sbjct: 391 FRQHKTKDKHEIDRMTL 407
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKAS---GQGQEEFMNEVMVIS 546
N+F + +G+GGFG VY + D G+ A+K L K QG+ +NE +++S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 75/196 (38%), Gaps = 56/196 (28%)
Query: 497 FQLANKLGQGGFGPVYKGKLQDGQE----IAVKRLSKASGQG-QEEFMNEVMVISNLQHR 551
+L +G+G FG V++G + +A+K + +E+F+ E + + H
Sbjct: 392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 552 NLVRLLGCCVERE--------------------------ENMLIYEYMPNKSLDSF---- 581
++V+L+G E ++++Y Y + +L
Sbjct: 452 HIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 511
Query: 582 --------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
L DFGL+R + A+K + +M+PE RF+
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRFT 570
Query: 622 EKSDVFSFGVLLLEIV 637
SDV+ FGV + EI+
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEI-AVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
++ K+G+G +G V+K K ++ EI A+K RL + E+ ++ L+H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 552 NLVRLLGCCVEREENMLIYEY 572
N+VRL ++ L++E+
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEF 82
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRLSK-ASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++ +AVK L A+ + + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVL+ EI +
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSG--- 639
D GLA F + A+ VGT+GYM+PE +G + +D FS G +L +++ G
Sbjct: 335 DLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
Query: 640 --RKNTSFYHEEFELTL 654
+ T HE +TL
Sbjct: 391 FRQHKTKDKHEIDRMTL 407
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKAS---GQGQEEFMNEVMVIS 546
N+F + +G+GGFG VY + D G+ A+K L K QG+ +NE +++S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + D +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 191 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
+ L LG+G FG V + K + +AVK L + + + M+E+ ++ +
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 548 L-QHRNLVRLLGCCVER-EENMLIYEYMPNKSLDSFL 582
+ H N+V LLG C + M+I E+ +L ++L
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 124
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 80/208 (38%), Gaps = 61/208 (29%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSK---ASGQGQEEFMNEVMVISNL 548
+ +FQ+ LG G FG V+ + +G+ A+K L K + E +E +++S +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------- 582
H ++R+ G + ++ +I +Y+ L S L
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH 123
Query: 583 ------------------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFG A+ T L GT Y++PE
Sbjct: 124 SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDYIAPEVVSTK 178
Query: 619 RFSEKSDVFSFGVLLLEIVSGRKNTSFY 646
+++ D +SFG+L+ E+++G T FY
Sbjct: 179 PYNKSIDWWSFGILIYEMLAGY--TPFY 204
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSG--- 639
D GLA F + A+ VGT+GYM+PE +G + +D FS G +L +++ G
Sbjct: 334 DLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
Query: 640 --RKNTSFYHEEFELTL 654
+ T HE +TL
Sbjct: 390 FRQHKTKDKHEIDRMTL 406
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKAS---GQGQEEFMNEVMVIS 546
N+F + +G+GGFG VY + D G+ A+K L K QG+ +NE +++S
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 243
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA-TKRLV 604
+N+ HR+L + N+L+ N + D + DFGLAR+ + D V
Sbjct: 145 ANVLHRDL---------KPSNLLL-----NTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 605 GTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
T Y +PE + + +++ D++S G +L E++S R
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + D +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 191 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
+ +L LG+G FG V + K + +AVK L + + + M+E+ ++ +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 548 L-QHRNLVRLLGCCVER-EENMLIYEYMPNKSLDSFL 582
+ H N+V LLG C + M+I E+ +L ++L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 494 TNNFQLANKLGQGGFGPVYKG-KLQDGQEIA--VKRLSKASGQGQEEFMNEVMVISNLQH 550
T +QL +LG+G F V + K+ GQE A + K S + ++ E + L+H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSL 578
N+VRL E + LI++ + L
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGEL 97
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HRNL + EN+L+ + ++ L DFGLA G +Q A GT GY
Sbjct: 133 HRNL---------KPENLLLASKLKGAAVK--LADFGLAIEVEG--EQQAWFGFAGTPGY 179
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE + + + D+++ GV+L ++ G
Sbjct: 180 LSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRLSK-ASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++ +AVK L A+ + + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVL+ EI +
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRLSK-ASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++ +AVK L A+ + + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYL 132
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVL+ EI +
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFG++ G + VGT YM+PE +S +SD++S G+ L+E+ GR
Sbjct: 156 LCDFGVS----GQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 579 DSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
D L DFG+A Q + T VGT +M+PE + + K+D++S G+ +E+
Sbjct: 158 DVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAK 215
Query: 639 GRKNTSFYH 647
G S H
Sbjct: 216 GEPPNSDMH 224
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRLSK-ASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++ +AVK L A+ + + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVL+ EI +
Sbjct: 198 IADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 79/214 (36%), Gaps = 60/214 (28%)
Query: 489 ELANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISN 547
+ N F LG G F V+ K + G+ A+K + K+ NE+ V+
Sbjct: 3 QTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKK 62
Query: 548 LQHRNLV--------------------------RLL--GCCVEREENMLIYEYM------ 573
++H N+V R+L G E++ +++I + +
Sbjct: 63 IKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYL 122
Query: 574 -------------------PNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEY 614
P ++ + DFGL+++ + GT GY++PE
Sbjct: 123 HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEV 178
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHE 648
+ +S+ D +S GV+ ++ G FY E
Sbjct: 179 LAQKPYSKAVDCWSIGVITYILLCGY--PPFYEE 210
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + D +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 182 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
+ +L LG+G FG V + K + +AVK L + + + M+E+ ++ +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 548 L-QHRNLVRLLGCCVER-EENMLIYEYMPNKSLDSFL 582
+ H N+V LLG C + M+I E+ +L ++L
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL 114
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + D +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 182 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
+ +L LG+G FG V + K + +AVK L + + + M+E+ ++ +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 548 L-QHRNLVRLLGCCVER-EENMLIYEYMPNKSLDSFL 582
+ H N+V LLG C + M+I E+ +L ++L
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 114
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+ +A LG+G FG V++ ++ + + K G Q E+ +++ +HRN++
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILH 65
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSF 581
L EE ++I+E++ LD F
Sbjct: 66 LHESFESMEELVMIFEFISG--LDIF 89
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+F+ +G GGFG V+K K + DG+ +KR+ E+ EV ++ L H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVK----YNNEKAEREVKALAKLDHVNIV 67
Query: 555 RLLGC 559
GC
Sbjct: 68 HYNGC 72
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIV 637
DFGL + + +K GT YMSPE + ++ D+++ G++L E++
Sbjct: 165 DFGLVTSLKNDGKRXRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + D +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 191 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
+ +L LG+G FG V + K + +AVK L + + + M+E+ ++ +
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 548 L-QHRNLVRLLGCCVER-EENMLIYEYMPNKSLDSFL 582
+ H N+V LLG C + M+I E+ +L ++L
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRLSK-ASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++ +AVK L A+ + + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVL+ EI +
Sbjct: 198 IADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRLSK-ASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++ +AVK L A+ + + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
Score = 35.8 bits (81), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVL+ EI +
Sbjct: 198 IADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQ-GQEEFMNEVMVISNLQHRN 552
+F+ LG+GGFG V++ K + D A+KR+ + + +E+ M EV ++ L+H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 553 LVRLLGCCVER 563
+VR +E+
Sbjct: 65 IVRYFNAWLEK 75
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIV 637
VGT YMSPE +S K D+FS G++L E++
Sbjct: 191 VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + D +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 191 DFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
+ +L LG+G FG V + K + +AVK L + + + M+E+ ++ +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 548 L-QHRNLVRLLGCCVER-EENMLIYEYMPNKSLDSFL 582
+ H N+V LLG C + M+I E+ +L ++L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 60/207 (28%)
Query: 497 FQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLSKASGQGQEEFM-NEVMVISNLQHRNLV 554
+ + LG G F V + + Q+ +A+K ++K + +G+E M NE+ V+ ++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 555 RL----------------------------LGCCVEREENMLIYEYM------------- 573
L G ER+ + LI++ +
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 574 ----PNK----SLDS----FLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
P SLD + DFGL+++ + GT GY++PE + +S
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 622 EKSDVFSFGVLLLEIVSGRKNTSFYHE 648
+ D +S GV+ ++ G FY E
Sbjct: 197 KAVDCWSIGVIAYILLCGY--PPFYDE 221
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 58/198 (29%)
Query: 497 FQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFM-NEVMVISNLQHRNLV 554
F+ LG G F V + + G+ AVK + K + +G+E + NE+ V+ ++H N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 555 RL----------------------------LGCCVEREENMLIYE--------------- 571
L G E++ + LI +
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVH 143
Query: 572 ----------YMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
Y ++ + DFGL+++ G D +T GT GY++PE + +S
Sbjct: 144 RDLKPENLLYYSQDEESKIMISDFGLSKM-EGKGDVMSTA--CGTPGYVAPEVLAQKPYS 200
Query: 622 EKSDVFSFGVLLLEIVSG 639
+ D +S GV+ ++ G
Sbjct: 201 KAVDCWSIGVIAYILLCG 218
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 60/207 (28%)
Query: 497 FQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLSKASGQGQEEFM-NEVMVISNLQHRNLV 554
+ + LG G F V + + Q+ +A+K ++K + +G+E M NE+ V+ ++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 555 RL----------------------------LGCCVEREENMLIYEYM------------- 573
L G ER+ + LI++ +
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 574 ----PNK----SLDS----FLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
P SLD + DFGL+++ + GT GY++PE + +S
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 622 EKSDVFSFGVLLLEIVSGRKNTSFYHE 648
+ D +S GV+ ++ G FY E
Sbjct: 197 KAVDCWSIGVIAYILLCGY--PPFYDE 221
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+F+ +G GGFG V+K K + DG+ ++R+ E+ EV ++ L H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVK----YNNEKAEREVKALAKLDHVNIV 68
Query: 555 RLLGC 559
GC
Sbjct: 69 HYNGC 73
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIV 637
DFGL + + +K GT YMSPE + ++ D+++ G++L E++
Sbjct: 179 DFGLVTSLKNDGKRTRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKR-LSKASGQG-QEEFMNEVMVISNL 548
+ + ++ K+GQG FG V+K + + GQ++A+K+ L + +G + E+ ++ L
Sbjct: 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 73
Query: 549 QHRNLVRLLGCC 560
+H N+V L+ C
Sbjct: 74 KHENVVNLIEIC 85
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKR-LSKASGQG-QEEFMNEVMVISNL 548
+ + ++ K+GQG FG V+K + + GQ++A+K+ L + +G + E+ ++ L
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 549 QHRNLVRLLGCC 560
+H N+V L+ C
Sbjct: 75 KHENVVNLIEIC 86
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 60/207 (28%)
Query: 497 FQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLSKASGQGQEEFM-NEVMVISNLQHRNLV 554
+ + LG G F V + + Q+ +A+K ++K + +G+E M NE+ V+ ++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 555 RL----------------------------LGCCVEREENMLIYEYM------------- 573
L G ER+ + LI++ +
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 574 ----PNK----SLDS----FLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
P SLD + DFGL+++ + GT GY++PE + +S
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 622 EKSDVFSFGVLLLEIVSGRKNTSFYHE 648
+ D +S GV+ ++ G FY E
Sbjct: 197 KAVDCWSIGVIAYILLCGY--PPFYDE 221
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 77/198 (38%), Gaps = 60/198 (30%)
Query: 497 FQLANKLGQGGFGPVYKGKLQDGQEI--AVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ L N +G+G +G V K +Q G I A K++ K + + F E+ ++ +L H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 555 RLLGCCVEREENMLIYEYMPNKSL------------------------------------ 578
RL + + L+ E L
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH 129
Query: 579 -----DSFLF------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
++FLF DFGLA F + + VGT Y+SP+ +EG +
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQ-VLEGLYG 185
Query: 622 EKSDVFSFGVLLLEIVSG 639
+ D +S GV++ ++ G
Sbjct: 186 PECDEWSAGVMMYVLLCG 203
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRLSK-ASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++ +AVK L A+ + + ++E+ ++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 178
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVL+ EI +
Sbjct: 244 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + D +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 191 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
+ +L LG+G FG V + K + +AVK L + + + M+E+ ++ +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 548 L-QHRNLVRLLGCCVER-EENMLIYEYMPNKSLDSFL 582
+ H N+V LLG C + M+I E+ +L ++L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRK 641
L DFG+A Q + T VGT +M+PE + + K+D++S G+ +E+ G
Sbjct: 145 LADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP 202
Query: 642 NTSFYH 647
S H
Sbjct: 203 PHSELH 208
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKR-LSKASGQG-QEEFMNEVMVISNL 548
+ + ++ K+GQG FG V+K + + GQ++A+K+ L + +G + E+ ++ L
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 549 QHRNLVRLLGCC 560
+H N+V L+ C
Sbjct: 75 KHENVVNLIEIC 86
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 73/197 (37%), Gaps = 56/197 (28%)
Query: 497 FQLANKLGQGGFGPV-YKGKLQDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLV 554
++L +G GGF V + G+ +A+K + K + G E+ + NL+H+++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF--------------------------------- 581
+L + ++ EY P L +
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAH 131
Query: 582 -----------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR--FSE 622
L DFGL GN+D + G+ Y +PE ++G+
Sbjct: 132 RDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD-YHLQTCCGSLAYAAPE-LIQGKSYLGS 189
Query: 623 KSDVFSFGVLLLEIVSG 639
++DV+S G+LL ++ G
Sbjct: 190 EADVWSMGILLYVLMCG 206
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQ-GQEEFMNEVMVISNLQHRN 552
+F+ +G+GGFG V++ K + D A+KR+ + + +E+ M EV ++ L+H
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65
Query: 553 LVRLLGCCVE 562
+VR +E
Sbjct: 66 IVRYFNAWLE 75
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
Query: 584 DFGLARIFGGNQDQ----------AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLL 633
DFGL ++++ A VGT YMSPE +S K D+FS G++L
Sbjct: 207 DFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLIL 266
Query: 634 LEIV 637
E++
Sbjct: 267 FELL 270
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 60/207 (28%)
Query: 497 FQLANKLGQGGFGPVYKGKLQDGQE-IAVKRLSKASGQGQEEFM-NEVMVISNLQHRNLV 554
+ + LG G F V + + Q+ +A+K ++K + +G+E M NE+ V+ ++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 555 RL----------------------------LGCCVEREENMLIYEYM------------- 573
L G ER+ + LI++ +
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 574 ----PNK----SLDS----FLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
P SLD + DFGL+++ + GT GY++PE + +S
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 622 EKSDVFSFGVLLLEIVSGRKNTSFYHE 648
+ D +S GV+ ++ G FY E
Sbjct: 197 KAVDCWSIGVIAYILLCGY--PPFYDE 221
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRLSK-ASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++ +AVK L A+ + + ++E+ ++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 124
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVL+ EI +
Sbjct: 190 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++AVK L S A+ + + ++E+ ++
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 80 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 117
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVLL EI +
Sbjct: 183 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKR-LSKASGQG-QEEFMNEVMVISNL 548
+ + ++ K+GQG FG V+K + + GQ++A+K+ L + +G + E+ ++ L
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 549 QHRNLVRLLGCC 560
+H N+V L+ C
Sbjct: 75 KHENVVNLIEIC 86
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFGL + G +D A K GT Y++PE + + D + GV++ E++ GR
Sbjct: 292 DFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--L 347
Query: 644 SFY---HEE-FELTLL 655
FY HE+ FEL L+
Sbjct: 348 PFYNQDHEKLFELILM 363
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR + D +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 185 IXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
+ L LG+G FG V + K + +AVK L + + + M+E+ ++ +
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 548 L-QHRNLVRLLGCCVER-EENMLIYEYMPNKSLDSFL 582
+ H N+V LLG C + M+I E+ +L ++L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + D +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 193 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
+ +L LG+G FG V + K + +AVK L + + + M+E+ ++ +
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 548 L-QHRNLVRLLGCCVER-EENMLIYEYMPNKSLDSFL 582
+ H N+V LLG C + M+I E+ +L ++L
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + D +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 187 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
+ L LG+G FG V + K + +AVK L + + + M+E+ ++ +
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 548 L-QHRNLVRLLGCCVER-EENMLIYEYMPNKSLDSFL 582
+ H N+V LLG C + M+I E+ +L ++L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + D +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 182 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
+ +L LG+G FG V + K + +AVK L + + + M+E+ ++ +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 548 L-QHRNLVRLLGCCVER-EENMLIYEYMPNKSLDSFL 582
+ H N+V LLG C + M+I E+ +L ++L
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL 114
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++AVK L S A+ + + ++E+ ++
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 77 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 114
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVLL EI +
Sbjct: 180 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++AVK L S A+ + + ++E+ ++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVLL EI +
Sbjct: 191 IADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRLSK-ASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++ +AVK L A+ + + ++E+ ++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 119
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVL+ EI +
Sbjct: 185 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++AVK L S A+ + + ++E+ ++
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 81 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 118
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVLL EI +
Sbjct: 184 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFGL + G +D A K GT Y++PE + + D + GV++ E++ GR
Sbjct: 295 DFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--L 350
Query: 644 SFY---HEE-FELTLL 655
FY HE+ FEL L+
Sbjct: 351 PFYNQDHEKLFELILM 366
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRLSK-ASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++ +AVK L A+ + + ++E+ ++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 121
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVL+ EI +
Sbjct: 187 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++AVK L S A+ + + ++E+ ++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVLL EI +
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + D +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 182 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
+ +L LG+G FG V + K + +AVK L + + + M+E+ ++ +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 548 L-QHRNLVRLLGCCVER-EENMLIYEYMPNKSLDSFL 582
+ H N+V LLG C + M+I E+ +L ++L
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL 114
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++AVK L S A+ + + ++E+ ++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVLL EI +
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++AVK L S A+ + + ++E+ ++
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 110
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVLL EI +
Sbjct: 176 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRN 552
N++L +G+G F V + + G+E+AVK + K + ++ EV ++ L H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSP 612
+V+L + L+ EY + +L G + + +A +++V Y
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK---EKEARAKFRQIVSAVQYCHQ 132
Query: 613 EYAME 617
+Y +
Sbjct: 133 KYIVH 137
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 499 LANKLGQGGFGPVY--------KGKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVISNL- 548
L LG+G FG V K K ++AVK L S A+ + + ++E+ ++ +
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+H+N++ LLG C + +I EY +L +L
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 166
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR T +M+PE + ++ +SDV+SFGVLL EI +
Sbjct: 234 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++AVK L S A+ + + ++E+ ++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVLL EI +
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRN 552
N++L +G+G F V + + G+E+AVK + K + ++ EV ++ L H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG 586
+V+L + L+ EY + +L G
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG 101
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 77/198 (38%), Gaps = 60/198 (30%)
Query: 497 FQLANKLGQGGFGPVYKGKLQDGQEI--AVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ L N +G+G +G V K +Q G I A K++ K + + F E+ ++ +L H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 555 RLLGCCVEREENMLIYEYMPNKSL------------------------------------ 578
RL + + L+ E L
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH 146
Query: 579 -----DSFLF------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
++FLF DFGLA F + + VGT Y+SP+ +EG +
Sbjct: 147 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQ-VLEGLYG 202
Query: 622 EKSDVFSFGVLLLEIVSG 639
+ D +S GV++ ++ G
Sbjct: 203 PECDEWSAGVMMYVLLCG 220
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFGL + G +D A K GT Y++PE + + D + GV++ E++ GR
Sbjct: 154 DFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--L 209
Query: 644 SFY---HEE-FELTLL 655
FY HE+ FEL L+
Sbjct: 210 PFYNQDHEKLFELILM 225
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 494 TNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLS--KASGQGQEEFMNEVMVISNLQH 550
T+ +QL +G+G F V + KL G E A K ++ K S + ++ E + L+H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSL 578
N+VRL E + L+++ + L
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGEL 90
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 563 REENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSE 622
+ EN+L+ ++ L DFGLA G DQ A GT GY+SPE + + +
Sbjct: 130 KPENLLLASKCKGAAVK--LADFGLAIEVQG--DQQAWFGFAGTPGYLSPEVLRKEAYGK 185
Query: 623 KSDVFSFGVLLLEIVSG 639
D+++ GV+L ++ G
Sbjct: 186 PVDIWACGVILYILLVG 202
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRN 552
N++L +G+G F V + + G+E+AVK + K + ++ EV ++ L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG 586
+V+L + L+ EY + +L G
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG 108
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + D +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 228 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 14/140 (10%)
Query: 457 VQRLDLGEAYANFSTEKVNPARLQ-----DLLVFNFEELANATNNFQLANKLGQGGFGPV 511
V+R + GE + + ++P L + L ++ + + +L LG+G FG V
Sbjct: 21 VKRANGGELKTGYLSIVMDPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQV 80
Query: 512 YKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISNL-QHRNLVRLLGCCVER 563
+ K + +AVK L + + + M+E+ ++ ++ H N+V LLG C +
Sbjct: 81 IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140
Query: 564 -EENMLIYEYMPNKSLDSFL 582
M+I E+ +L ++L
Sbjct: 141 GGPLMVIVEFCKFGNLSTYL 160
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRN 552
N++L +G+G F V + + G+E+AVK + K + ++ EV ++ L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG 586
+V+L + L+ EY + +L G
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG 108
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRK 641
L DFG+A Q + T VGT +M+PE + + K+D++S G+ +E+ G
Sbjct: 165 LADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP 222
Query: 642 NTSFYH 647
S H
Sbjct: 223 PHSELH 228
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HRNL + EN+L+ ++ L DFGLA D A GT GY
Sbjct: 127 HRNL---------KPENLLLASKAKGAAVK--LADFGLAIEVN---DSEAWHGFAGTPGY 172
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE + +S+ D+++ GV+L ++ G
Sbjct: 173 LSPEVLKKDPYSKPVDIWACGVILYILLVG 202
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLS--KASGQGQEEFMNEVMVISNLQH 550
++N+ + +LG+G F V + + G E A K ++ K S + ++ E + LQH
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQA 598
N+VRL E + L+++ + LF+ +AR F D +
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADAS 107
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + D +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 241 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
+ +L LG+G FG V + K + +AVK L + + + M+E+ ++ +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 548 L-QHRNLVRLLGCCVER-EENMLIYEYMPNKSLDSFL 582
+ H N+V LLG C + M+I E+ +L ++L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFGL + G +D A K GT Y++PE + + D + GV++ E++ GR
Sbjct: 153 DFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--L 208
Query: 644 SFY---HEE-FELTLL 655
FY HE+ FEL L+
Sbjct: 209 PFYNQDHEKLFELILM 224
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HRNL + EN+L+ ++ L DFGLA D A GT GY
Sbjct: 128 HRNL---------KPENLLLASKAKGAAVK--LADFGLAIEVN---DSEAWHGFAGTPGY 173
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE + +S+ D+++ GV+L ++ G
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVG 203
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLS--KASGQGQEEFMNEVMVISNLQH 550
++N+ + +LG+G F V + + G E A K ++ K S + ++ E + LQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQA 598
N+VRL E + L+++ + LF+ +AR F D +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADAS 108
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + D +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 236 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
+ +L LG+G FG V + K + +AVK L + + + M+E+ ++ +
Sbjct: 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81
Query: 548 L-QHRNLVRLLGCCVER-EENMLIYEYMPNKSLDSFL 582
+ H N+V LLG C + M+I E+ +L ++L
Sbjct: 82 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 578 LDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVF------SFGV 631
L + L DFGLA F + T VGT YM+PE +EG + + D F + G+
Sbjct: 160 LTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGL 218
Query: 632 LLLEIVS 638
+L E+VS
Sbjct: 219 VLWELVS 225
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRN 552
N++L +G+G F V + + G+E+AVK + K + ++ EV ++ L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG 586
+V+L + L+ EY + +L G
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG 108
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ QG+ E+ ++ L H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRL 78
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + D +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 243 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
+ +L LG+G FG V + K + +AVK L + + + M+E+ ++ +
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 548 L-QHRNLVRLLGCCVER-EENMLIYEYMPNKSLDSFL 582
+ H N+V LLG C + M+I E+ +L ++L
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 582 LFDFGLARIFGGNQDQAATKR--LVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
L DFG+A G KR VGT +M+PE + + K+D++S G+ +E+ G
Sbjct: 160 LADFGVA----GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 215
Query: 640 RKNTSFYH 647
S H
Sbjct: 216 EPPHSELH 223
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFGL + G +D A K GT Y++PE + + D + GV++ E++ GR
Sbjct: 152 DFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--L 207
Query: 644 SFY---HEE-FELTLL 655
FY HE+ FEL L+
Sbjct: 208 PFYNQDHEKLFELILM 223
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HRNL + EN+L+ ++ L DFGLA D A GT GY
Sbjct: 128 HRNL---------KPENLLLASKAKGAAVK--LADFGLAIEVN---DSEAWHGFAGTPGY 173
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE + +S+ D+++ GV+L ++ G
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVG 203
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLS--KASGQGQEEFMNEVMVISNLQH 550
++N+ + +LG+G F V + + G E A K ++ K S + ++ E + LQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQA 598
N+VRL E + L+++ + LF+ +AR F D +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADAS 108
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ QG+ E+ ++ L H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRL 78
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ QG+ E+ ++ L H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRL 78
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + D +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 234 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQEE-FMNEVMVISN 547
+ +L LG+G FG V + K + +AVK L + + + M+E+ ++ +
Sbjct: 20 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 79
Query: 548 L-QHRNLVRLLGCCVER-EENMLIYEYMPNKSLDSFL 582
+ H N+V LLG C + M+I E+ +L ++L
Sbjct: 80 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 582 LFDFGLARIFGGNQDQAATKR--LVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
L DFG+A G KR VGT +M+PE + + K+D++S G+ +E+ G
Sbjct: 145 LADFGVA----GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
Query: 640 RKNTSFYH 647
S H
Sbjct: 201 EPPHSELH 208
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HRNL + EN+L+ ++ L DFGLA D A GT GY
Sbjct: 151 HRNL---------KPENLLLASKAKGAAVK--LADFGLAIEVN---DSEAWHGFAGTPGY 196
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+SPE + +S+ D+++ GV+L ++ G
Sbjct: 197 LSPEVLKKDPYSKPVDIWACGVILYILLVG 226
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLS--KASGQGQEEFMNEVMVISNLQH 550
++N+ + +LG+G F V + + G E A K ++ K S + ++ E + LQH
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQA 598
N+VRL E + L+++ + LF+ +AR F D +
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADAS 131
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
D GLA Q K VGT GYM+PE R++ D ++ G LL E+++G+
Sbjct: 329 DLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
D GLA Q K VGT GYM+PE R++ D ++ G LL E+++G+
Sbjct: 329 DLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFGL + G D A K GT Y++PE + + D + GV++ E++ GR
Sbjct: 153 DFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--L 208
Query: 644 SFYHEE----FELTLL 655
FY+++ FEL L+
Sbjct: 209 PFYNQDHERLFELILM 224
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 80/213 (37%), Gaps = 64/213 (30%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASG------------------ 532
N +++FQL + LG+G +G V + G+ +A+K++
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 533 ----------QGQEEF--MNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY-------- 572
Q + F NEV +I L +L R++ + ++++ + Y
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 573 ----------------MPNKSLDSFLFDFGLARIFGGNQ--------DQAATKRLVGTYG 608
+ N + D + DFGLARI + Q+ V T
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRW 187
Query: 609 YMSPEYAM-EGRFSEKSDVFSFGVLLLEIVSGR 640
Y +PE + ++S DV+S G +L E+ R
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK-----RLSKAS-GQGQEEFMNEVMV 544
+ +++++ +LG G F V K + + G+E A K RLS + G +EE EV +
Sbjct: 9 DVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 68
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ ++H N++ L + + +LI E + L FL
Sbjct: 69 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 106
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFGL + G D A K GT Y++PE + + D + GV++ E++ GR
Sbjct: 148 DFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--L 203
Query: 644 SFYHEE----FELTLL 655
FY+++ FEL L+
Sbjct: 204 PFYNQDHERLFELILM 219
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 80/213 (37%), Gaps = 64/213 (30%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASG------------------ 532
N +++FQL + LG+G +G V + G+ +A+K++
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 533 ----------QGQEEF--MNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY-------- 572
Q + F NEV +I L +L R++ + ++++ + Y
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 573 ----------------MPNKSLDSFLFDFGLARIFGGNQ--------DQAATKRLVGTYG 608
+ N + D + DFGLARI + Q+ V T
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRW 187
Query: 609 YMSPEYAM-EGRFSEKSDVFSFGVLLLEIVSGR 640
Y +PE + ++S DV+S G +L E+ R
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 80/213 (37%), Gaps = 64/213 (30%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASG------------------ 532
N +++FQL + LG+G +G V + G+ +A+K++
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 533 ----------QGQEEF--MNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY-------- 572
Q + F NEV +I L +L R++ + ++++ + Y
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 573 ----------------MPNKSLDSFLFDFGLARIFGGNQ--------DQAATKRLVGTYG 608
+ N + D + DFGLARI + Q+ V T
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRW 187
Query: 609 YMSPEYAM-EGRFSEKSDVFSFGVLLLEIVSGR 640
Y +PE + ++S DV+S G +L E+ R
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 544 VISNLQH---RNLV-RLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
++S L+H RN++ R L + EN+L+ + + + D GLA Q +
Sbjct: 298 IVSGLEHLHQRNIIYRDL-----KPENVLL-----DDDGNVRISDLGLAVELKAGQTK-- 345
Query: 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
TK GT G+M+PE + + D F+ GV L E+++ R
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 497 FQLANKLGQGGFGPVYKGK-----LQDGQEIAVKRLSKASGQG--QEEFMNEVMVISNLQ 549
+ + +LG G F V K + L+ + KR S+AS +G +EE EV ++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H N++ L R + +LI E + L FL
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFGL + G D A K GT Y++PE + + D + GV++ E++ GR
Sbjct: 148 DFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--L 203
Query: 644 SFYHEE----FELTLL 655
FY+++ FEL L+
Sbjct: 204 PFYNQDHERLFELILM 219
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 544 VISNLQH---RNLV-RLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
++S L+H RN++ R L + EN+L+ + + + D GLA Q +
Sbjct: 298 IVSGLEHLHQRNIIYRDL-----KPENVLL-----DDDGNVRISDLGLAVELKAGQTK-- 345
Query: 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
TK GT G+M+PE + + D F+ GV L E+++ R
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 497 FQLANKLGQGGFGPVYKGK-----LQDGQEIAVKRLSKASGQG--QEEFMNEVMVISNLQ 549
+ + +LG G F V K + L+ + KR S+AS +G +EE EV ++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H N++ L R + +LI E + L FL
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 16/99 (16%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L + EN+L P+ L + DFGL++I + Q K + GT GY
Sbjct: 171 HRDL---------KPENLLYATPAPDAPLK--IADFGLSKIV---EHQVLMKTVCGTPGY 216
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHE 648
+PE + + D++S G++ ++ G + FY E
Sbjct: 217 CAPEILRGCAYGPEVDMWSVGIITYILLCGFE--PFYDE 253
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 544 VISNLQH---RNLV-RLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
++S L+H RN++ R L + EN+L+ + + + D GLA Q +
Sbjct: 298 IVSGLEHLHQRNIIYRDL-----KPENVLL-----DDDGNVRISDLGLAVELKAGQTK-- 345
Query: 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
TK GT G+M+PE + + D F+ GV L E+++ R
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFGL + G D A K GT Y++PE + + D + GV++ E++ GR
Sbjct: 148 DFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--L 203
Query: 644 SFYHEE----FELTLL 655
FY+++ FEL L+
Sbjct: 204 PFYNQDHERLFELILM 219
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 76/204 (37%), Gaps = 57/204 (27%)
Query: 497 FQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLS-KASGQGQEEFMNEVMVISNLQHRNLV 554
F +++G+G FG VYKG +E+ A+K + + + E+ E+ V+S +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 555 RLLGCCVEREENMLIYEYMPN-------------------------KSLDSF-------- 581
R G ++ + +I EY+ K LD
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHR 140
Query: 582 ----------------LFDFGLARIFGGNQDQAATKR--LVGTYGYMSPEYAMEGRFSEK 623
L DFG+A G KR VGT +M+PE + + K
Sbjct: 141 DIKAANVLLSEQGDVKLADFGVA----GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFK 196
Query: 624 SDVFSFGVLLLEIVSGRKNTSFYH 647
+D++S G+ +E+ G S H
Sbjct: 197 ADIWSLGITAIELAKGEPPNSDLH 220
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRN 552
++F+ LGQG FG V K + D + A+K++ + + + ++EV ++++L H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQY 63
Query: 553 LVRLLGCCVER 563
+VR +ER
Sbjct: 64 VVRYYAAWLER 74
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFGL + G D A K GT Y++PE + + D + GV++ E++ GR
Sbjct: 148 DFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--L 203
Query: 644 SFYHEE----FELTLL 655
FY+++ FEL L+
Sbjct: 204 PFYNQDHERLFELILM 219
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 544 VISNLQH---RNLV-RLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
++S L+H RN++ R L + EN+L+ + + + D GLA Q +
Sbjct: 298 IVSGLEHLHQRNIIYRDL-----KPENVLL-----DDDGNVRISDLGLAVELKAGQTK-- 345
Query: 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
TK GT G+M+PE + + D F+ GV L E+++ R
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVK-----RLSKAS-GQGQEEFMNEVMVISN 547
+++++ +LG G F V K + + G+E A K RLS + G +EE EV ++
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
++H N++ L + + +LI E + L FL
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 99
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 494 TNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLS--KASGQGQEEFMNEVMVISNLQH 550
T+++QL +LG+G F V + K QE A K ++ K S + ++ E + L+H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSL 578
N+VRL E + L+++ + L
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGEL 117
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 547 NLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGT 606
++ HR+L + EN+L+ ++ L DFGLA G +Q A GT
Sbjct: 150 DIVHRDL---------KPENLLLASKCKGAAVK--LADFGLAIEVQG--EQQAWFGFAGT 196
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
GY+SPE + + + D+++ GV+L ++ G
Sbjct: 197 PGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRN 552
N++L +G+G F V + + G+E+AV+ + K + ++ EV ++ L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG 586
+V+L + L+ EY + +L G
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG 108
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 497 FQLANKLGQGGFGPVYKGK-----LQDGQEIAVKRLSKASGQG--QEEFMNEVMVISNLQ 549
+ + +LG G F V K + L+ + KR S+AS +G +EE EV ++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H N++ L R + +LI E + L FL
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRN 552
N++L +G+G F V + + G+E+AVK + K + ++ EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG 586
+V+L + L+ EY + +L G
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHG 108
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFGL + G D A K GT Y++PE + + D + GV++ E++ GR
Sbjct: 148 DFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--L 203
Query: 644 SFYHEE----FELTLL 655
FY+++ FEL L+
Sbjct: 204 PFYNQDHERLFELILM 219
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRLSK-ASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++ +AVK L A+ + + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I Y +L +L
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYL 132
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVL+ EI +
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 497 FQLANKLGQGGFGPVYKGK-----LQDGQEIAVKRLSKASGQG--QEEFMNEVMVISNLQ 549
+ + +LG G F V K + L+ + KR S+AS +G +EE EV ++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H N++ L R + +LI E + L FL
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRN 552
N++L +G+G F V + + G+E+AV+ + K + ++ EV ++ L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG 586
+V+L + L+ EY + +L G
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG 108
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 497 FQLANKLGQGGFGPVYKGK-----LQDGQEIAVKRLSKASGQG--QEEFMNEVMVISNLQ 549
+ + +LG G F V K + L+ + KR S+AS +G +EE EV ++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H N++ L R + +LI E + L FL
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRN 552
N++L +G+G F V + + G+E+A+K + K + ++ EV ++ L H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG 586
+V+L + LI EY + +L G
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG 109
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFGL + G D A K GT Y++PE + + D + GV++ E++ GR
Sbjct: 151 DFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--L 206
Query: 644 SFYHEE----FELTLL 655
FY+++ FEL L+
Sbjct: 207 PFYNQDHERLFELILM 222
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H N+VRL
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRL 106
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H N+VRL
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRL 83
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H N+VRL
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRL 114
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H N+VRL
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRL 112
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H N+VRL
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRL 112
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
L DFGL++ ++ +A + GT YM+PE ++ +D +SFGVL+ E+++G
Sbjct: 167 LTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRN 552
N++L +G+G F V + + G+E+A+K + K + ++ EV ++ L H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG 586
+V+L + LI EY + +L G
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG 106
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 497 FQLANKLGQGGFGPVYKGK-----LQDGQEIAVKRLSKASGQG--QEEFMNEVMVISNLQ 549
+ + +LG G F V K + L+ + KR S+AS +G +EE EV ++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H N++ L R + +LI E + L FL
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFL 106
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEY----AMEGRFSEKSDVFSFGVLLLEIV 637
L DFG++ G D A R G YM+PE A + +SDV+S G+ L E+
Sbjct: 167 LCDFGIS---GQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELA 223
Query: 638 SGR 640
+GR
Sbjct: 224 TGR 226
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H N+VRL
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRL 91
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H N+VRL
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRL 116
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H N+VRL
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRL 86
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
L DFGL++ ++ +A + GT YM+PE ++ +D +SFGVL+ E+++G
Sbjct: 168 LTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRL 78
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
L DFGL++ ++ +A + GT YM+PE ++ +D +SFGVL+ E+++G
Sbjct: 167 LTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRL 78
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H N+VRL
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRL 97
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H N+VRL
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRL 90
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H N+VRL
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRL 157
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H N+VRL
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRL 79
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRL 78
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRL 78
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H N+VRL
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRL 90
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H N+VRL
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRL 82
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVY--------KGKLQDGQEIAVKRLSK-ASGQGQEEFMNEVMVI 545
+ L LG+G FG V K K ++ +AVK L A+ + + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I Y +L +L
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYL 132
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+ DFGLAR T +M+PE + ++ +SDV+SFGVL+ EI +
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
L DFGL++ ++ +A + GT YM+PE S +D +S+GVL+ E+++G
Sbjct: 171 LTDFGLSKEAIDHEKKAYS--FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 577 SLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVF------SFG 630
+L + + DFGLA F + T VGT YM+PE +EG + + D F + G
Sbjct: 167 NLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMG 225
Query: 631 VLLLEIVS 638
++L E+ S
Sbjct: 226 LVLWELAS 233
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 495 NNFQLANKLGQGGFGPV-YKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNL 553
++ KLG+GGF V L DG A+KR+ Q +EE E + H N+
Sbjct: 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNI 88
Query: 554 VRLLGCCV 561
+RL+ C+
Sbjct: 89 LRLVAYCL 96
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS------GQGQEEFMNEVMVISN 547
+++++ +LG G F V K + + G+E A K + K G +EE EV ++
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
++H N++ L + + +LI E + L FL
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 120
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 584 DFGLAR--IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
DFG+ + + G A T GT Y++PE + +++ D +SFGVLL E++ G+
Sbjct: 162 DFGMCKENMLG----DAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 79/213 (37%), Gaps = 60/213 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYM-PNKSLDSFLFDFG-----LARIF-------- 591
+ ++RLL + +LI E M P + L F+ + G LAR F
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAV 127
Query: 592 ----------------------------------GGNQDQAATKRLVGTYGYMSPEYAME 617
G GT Y PE+
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 187
Query: 618 GRFSEKS-DVFSFGVLLLEIVSGRKNTSFYHEE 649
R+ +S V+S G+LL ++V G + F H+E
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCG--DIPFEHDE 218
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 584 DFGLAR--IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
DFG+ + + G A T GT Y++PE + +++ D +SFGVLL E++ G+
Sbjct: 161 DFGMCKENMLG----DAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 73/197 (37%), Gaps = 65/197 (32%)
Query: 502 KLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG-----QEEFMNEVMVISNLQHRNLVRL 556
+LG G FG V KG Q + + + + ++E + E V+ L + +VR+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 557 LGCCVEREENMLIYEYMPNKSLDSFL---------------------------------- 582
+G C E E ML+ E L+ +L
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 136
Query: 583 ----------------FDFGLARIFGGNQDQAATKRLVGTYG-----YMSPEYAMEGRFS 621
DFGL++ +++ + T+G + +PE +FS
Sbjct: 137 LAARNVLLVTQHYAKISDFGLSKALRADENXYKAQ----THGKWPVKWYAPECINYYKFS 192
Query: 622 EKSDVFSFGVLLLEIVS 638
KSDV+SFGVL+ E S
Sbjct: 193 SKSDVWSFGVLMWEAFS 209
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 18/104 (17%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQ-----------------EE 537
N++++ L QG F + + +D + A+K+ K+ + + ++
Sbjct: 31 NDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89
Query: 538 FMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF 581
F NE+ +I+++++ + G +E +IYEYM N S+ F
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF 133
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 72/196 (36%), Gaps = 63/196 (32%)
Query: 502 KLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG-----QEEFMNEVMVISNLQHRNLVRL 556
+LG G FG V KG Q + + + + ++E + E V+ L + +VR+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 557 LGCCVEREENMLIYEYMPNKSLDSFL---------------------------------- 582
+G C E E ML+ E L+ +L
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 152
Query: 583 ----------------FDFGLARIFGGNQD----QAATKRLVGTYGYMSPEYAMEGRFSE 622
DFGL++ +++ Q K V Y +PE +FS
Sbjct: 153 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSS 209
Query: 623 KSDVFSFGVLLLEIVS 638
KSDV+SFGVL+ E S
Sbjct: 210 KSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 72/196 (36%), Gaps = 63/196 (32%)
Query: 502 KLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG-----QEEFMNEVMVISNLQHRNLVRL 556
+LG G FG V KG Q + + + + ++E + E V+ L + +VR+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 557 LGCCVEREENMLIYEYMPNKSLDSFL---------------------------------- 582
+G C E E ML+ E L+ +L
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 152
Query: 583 ----------------FDFGLARIFGGNQD----QAATKRLVGTYGYMSPEYAMEGRFSE 622
DFGL++ +++ Q K V Y +PE +FS
Sbjct: 153 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSS 209
Query: 623 KSDVFSFGVLLLEIVS 638
KSDV+SFGVL+ E S
Sbjct: 210 KSDVWSFGVLMWEAFS 225
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 73/197 (37%), Gaps = 65/197 (32%)
Query: 502 KLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG-----QEEFMNEVMVISNLQHRNLVRL 556
+LG G FG V KG Q + + + + ++E + E V+ L + +VR+
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 557 LGCCVEREENMLIYEYMPNKSLDSFL---------------------------------- 582
+G C E E ML+ E L+ +L
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 132
Query: 583 ----------------FDFGLARIFGGNQDQAATKRLVGTYG-----YMSPEYAMEGRFS 621
DFGL++ +++ + T+G + +PE +FS
Sbjct: 133 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPECINYYKFS 188
Query: 622 EKSDVFSFGVLLLEIVS 638
KSDV+SFGVL+ E S
Sbjct: 189 SKSDVWSFGVLMWEAFS 205
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 68 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 116
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 69 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 117
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 83 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 131
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 14/123 (11%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN---- 540
+ +E + +Q+ LG GGFG VY G ++ D +A+K + K E N
Sbjct: 22 HMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 81
Query: 541 --EVMVISNLQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQD 596
EV+++ + ++RLL ER ++ ++ P D LFDF R G Q+
Sbjct: 82 PMEVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQE 136
Query: 597 QAA 599
+ A
Sbjct: 137 ELA 139
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 83 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 131
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 64 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 112
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 72/196 (36%), Gaps = 63/196 (32%)
Query: 502 KLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG-----QEEFMNEVMVISNLQHRNLVRL 556
+LG G FG V KG Q + + + + ++E + E V+ L + +VR+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 557 LGCCVEREENMLIYEYMPNKSLDSFL---------------------------------- 582
+G C E E ML+ E L+ +L
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 136
Query: 583 ----------------FDFGLARIFGGNQD----QAATKRLVGTYGYMSPEYAMEGRFSE 622
DFGL++ +++ Q K V Y +PE +FS
Sbjct: 137 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSS 193
Query: 623 KSDVFSFGVLLLEIVS 638
KSDV+SFGVL+ E S
Sbjct: 194 KSDVWSFGVLMWEAFS 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 72/196 (36%), Gaps = 63/196 (32%)
Query: 502 KLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG-----QEEFMNEVMVISNLQHRNLVRL 556
+LG G FG V KG Q + + + + ++E + E V+ L + +VR+
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 557 LGCCVEREENMLIYEYMPNKSLDSFL---------------------------------- 582
+G C E E ML+ E L+ +L
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 150
Query: 583 ----------------FDFGLARIFGGNQD----QAATKRLVGTYGYMSPEYAMEGRFSE 622
DFGL++ +++ Q K V Y +PE +FS
Sbjct: 151 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSS 207
Query: 623 KSDVFSFGVLLLEIVS 638
KSDV+SFGVL+ E S
Sbjct: 208 KSDVWSFGVLMWEAFS 223
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 96 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 144
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 64 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 112
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 64 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 112
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 73/197 (37%), Gaps = 65/197 (32%)
Query: 502 KLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG-----QEEFMNEVMVISNLQHRNLVRL 556
+LG G FG V KG Q + + + + ++E + E V+ L + +VR+
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 557 LGCCVEREENMLIYEYMPNKSLDSFL---------------------------------- 582
+G C E E ML+ E L+ +L
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 130
Query: 583 ----------------FDFGLARIFGGNQDQAATKRLVGTYG-----YMSPEYAMEGRFS 621
DFGL++ +++ + T+G + +PE +FS
Sbjct: 131 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPECINYYKFS 186
Query: 622 EKSDVFSFGVLLLEIVS 638
KSDV+SFGVL+ E S
Sbjct: 187 SKSDVWSFGVLMWEAFS 203
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 84 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 132
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 84 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 132
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 69 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 117
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 84 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 132
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 97 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 145
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 97 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 145
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 96 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 144
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 96 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 144
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 66
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 67 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 115
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 97 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 145
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 97 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 145
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 96 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 144
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 102
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 103 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 151
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
DFG+ + D TK GT Y++PE + + D ++FGVLL E+++G+
Sbjct: 485 DFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 73/197 (37%), Gaps = 65/197 (32%)
Query: 502 KLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG-----QEEFMNEVMVISNLQHRNLVRL 556
+LG G FG V KG Q + + + + ++E + E V+ L + +VR+
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 557 LGCCVEREENMLIYEYMPNKSLDSFL---------------------------------- 582
+G C E E ML+ E L+ +L
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 142
Query: 583 ----------------FDFGLARIFGGNQDQAATKRLVGTYG-----YMSPEYAMEGRFS 621
DFGL++ +++ + T+G + +PE +FS
Sbjct: 143 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPECINYYKFS 198
Query: 622 EKSDVFSFGVLLLEIVS 638
KSDV+SFGVL+ E S
Sbjct: 199 SKSDVWSFGVLMWEAFS 215
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRL-----SKASGQGQEEFMNEVMVISNLQHRNLVRL 556
LG+G F VYK + ++ Q +A+K++ S+A + E+ ++ L H N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 557 LGCCVEREENMLIYEYM 573
L + L++++M
Sbjct: 78 LDAFGHKSNISLVFDFM 94
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 111 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 159
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 69 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 117
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 111 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 159
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN------EVMVISN 547
+ +Q+ LG GGFG VY G ++ D +A+K + K E N EV+++
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 115
Query: 548 LQH--RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
+ ++RLL ER ++ ++ P D LFDF R G Q++ A
Sbjct: 116 VSSGFSGVIRLLD-WFERPDSFVLILERPEPVQD--LFDFITER--GALQEELA 164
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 582 LFDFGLARIFGGNQD---QAATKRLVGTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIV 637
+ DFG++ D K VGT +M+PE + R + K+D++SFG+ +E+
Sbjct: 157 IADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELA 216
Query: 638 SGRKNTSFYHEEFELTLL 655
+G + YH+ + +L
Sbjct: 217 TG---AAPYHKYPPMKVL 231
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
DFG+ + D TK GT Y++PE + + D ++FGVLL E+++G+
Sbjct: 164 DFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 582 LFDFGLARIFGGNQD---QAATKRLVGTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIV 637
+ DFG++ D K VGT +M+PE + R + K+D++SFG+ +E+
Sbjct: 162 IADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELA 221
Query: 638 SGRKNTSFYHE 648
+G + YH+
Sbjct: 222 TG---AAPYHK 229
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFGLA+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGLAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFGLA+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGLAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G AT L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 205 DFGFAKRVKG-----ATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 494 TNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSK--ASGQGQEEFMNEVMVISNL-Q 549
T F K+G G FG V+K K DG A+KR K A ++ + EV + L Q
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSL 578
H ++VR E + ++ EY SL
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSL 96
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 494 TNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSK--ASGQGQEEFMNEVMVISNL-Q 549
T F K+G G FG V+K K DG A+KR K A ++ + EV + L Q
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSL 578
H ++VR E + ++ EY SL
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSL 96
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 73/197 (37%), Gaps = 65/197 (32%)
Query: 502 KLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG-----QEEFMNEVMVISNLQHRNLVRL 556
+LG G FG V KG Q + + + + ++E + E V+ L + +VR+
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 557 LGCCVEREENMLIYEYMPNKSLDSFL---------------------------------- 582
+G C E E ML+ E L+ +L
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 494
Query: 583 ----------------FDFGLARIFGGNQDQAATKRLVGTYG-----YMSPEYAMEGRFS 621
DFGL++ +++ + T+G + +PE +FS
Sbjct: 495 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPECINYYKFS 550
Query: 622 EKSDVFSFGVLLLEIVS 638
KSDV+SFGVL+ E S
Sbjct: 551 SKSDVWSFGVLMWEAFS 567
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 494 TNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSK--ASGQGQEEFMNEVMVISNL-Q 549
T F K+G G FG V+K K DG A+KR K A ++ + EV + L Q
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSL 578
H ++VR E + ++ EY SL
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSL 98
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 494 TNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSK--ASGQGQEEFMNEVMVISNL-Q 549
T F K+G G FG V+K K DG A+KR K A ++ + EV + L Q
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSL 578
H ++VR E + ++ EY SL
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSL 94
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 499 LANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEF-MNEVMVISNLQHRNLVRL 556
L++ LGQG V++G+ + G A+K + S + M E V+ L H+N+V+L
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 557 LGCCVERE----ENMLIYEYMPNKSLDSFL 582
+E E +LI E+ P SL + L
Sbjct: 73 F--AIEEETTTRHKVLIMEFCPCGSLYTVL 100
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 73/197 (37%), Gaps = 65/197 (32%)
Query: 502 KLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG-----QEEFMNEVMVISNLQHRNLVRL 556
+LG G FG V KG Q + + + + ++E + E V+ L + +VR+
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 557 LGCCVEREENMLIYEYMPNKSLDSFL---------------------------------- 582
+G C E E ML+ E L+ +L
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 495
Query: 583 ----------------FDFGLARIFGGNQDQAATKRLVGTYG-----YMSPEYAMEGRFS 621
DFGL++ +++ + T+G + +PE +FS
Sbjct: 496 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPECINYYKFS 551
Query: 622 EKSDVFSFGVLLLEIVS 638
KSDV+SFGVL+ E S
Sbjct: 552 SKSDVWSFGVLMWEAFS 568
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 481 DLLVFNFEELANATNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFM 539
D L FE++ T+ LG+G + V LQ+G+E AVK + K +G +
Sbjct: 4 DSLPGKFEDMYKLTSEL-----LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVF 58
Query: 540 NEVMVISNLQ-HRNLVRLLGCCVEREENMLIYEYMPNKSL 578
EV + Q ++N++ L+ + L++E + S+
Sbjct: 59 REVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSI 98
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 499 LANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEF-MNEVMVISNLQHRNLVRL 556
L++ LGQG V++G+ + G A+K + S + M E V+ L H+N+V+L
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 557 LGCCVE--REENMLIYEYMPNKSLDSFL 582
E +LI E+ P SL + L
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVL 100
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+ DFGLAR G + T +V Y Y +PE + + E D++S GV++ E++ G
Sbjct: 167 ILDFGLARTAGTSF--MMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
L DFGL + D T GT YM+PE M + D +S G L+ ++++G
Sbjct: 162 LTDFGLCK--ESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+ DFGLAR G + T +V Y Y +PE + + E D++S GV++ E++ G
Sbjct: 167 ILDFGLARTAGTSF--MMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
L DFGL + D T GT YM+PE M + D +S G L+ ++++G
Sbjct: 162 LTDFGLCK--ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
DFG+ + D T+ GT Y++PE + + D +++GVLL E+++G+
Sbjct: 163 DFGMCK--EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 71/201 (35%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSK---ASGQGQEEFMNEVMVISNLQH 550
+NF+ LG+G FG V ++++ G AVK L K E M E ++S ++
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 551 RNLVRLLGCCVEREENM-----------LIYEYMPNKSLDSF------------------ 581
+ L CC + + + L++ ++ D
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD 142
Query: 582 ----------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR 619
L DFG+ + G + T GT Y++PE E
Sbjct: 143 KGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPEILQEML 200
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
+ D ++ GVLL E++ G
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGH 221
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 12/103 (11%)
Query: 496 NFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMNEVM----------V 544
++L LG+GGFG V+ G +L D ++A+K + + G + V V
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEY-MPNKSLDSFLFDFG 586
+ H ++RLL +E ML+ E +P + L ++ + G
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG 134
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 67/164 (40%), Gaps = 25/164 (15%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS-----------DVFSFG 630
L DFG+A + VGT YM PE + S ++ DV+S G
Sbjct: 151 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 210
Query: 631 VLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNV 690
+L + G+ T F +++ L + + N+ I+ P I E + ++++C
Sbjct: 211 CILYYMTYGK--TPFQQIINQISKLH---AIIDPNHEIEF--PDIPEKDLQ-DVLKC--- 259
Query: 691 GLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPAFTVRRGAY 734
C++ K R ++P +++ +I+ P + T Y
Sbjct: 260 ---CLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKY 300
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 63/202 (31%)
Query: 497 FQLANKLGQGGFGPVY-KGKLQDGQEIAVKRLSKASGQ-GQEEFMNEVMVISNLQHRNLV 554
F KLG G FG V+ + G E +K ++K Q E+ E+ V+ +L H N++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 555 RLL------------------GCCVER----------------------EENMLIY---E 571
++ G +ER N L Y +
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 572 YMPNKSL--DSFLF------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
++ +K L ++ LF DFGLA +F ++ + GT YM+PE +
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAPE-VFK 199
Query: 618 GRFSEKSDVFSFGVLLLEIVSG 639
+ K D++S GV++ +++G
Sbjct: 200 RDVTFKCDIWSAGVVMYFLLTG 221
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 67/164 (40%), Gaps = 25/164 (15%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS-----------DVFSFG 630
L DFG+A + VGT YM PE + S ++ DV+S G
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 254
Query: 631 VLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNV 690
+L + G+ T F +++ L + + N+ I+ P I E + ++++C
Sbjct: 255 CILYYMTYGK--TPFQQIINQISKL---HAIIDPNHEIEF--PDIPEKDLQ-DVLKC--- 303
Query: 691 GLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPAFTVRRGAY 734
C++ K R ++P +++ +I+ P + T Y
Sbjct: 304 ---CLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKY 344
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 67/164 (40%), Gaps = 25/164 (15%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS-----------DVFSFG 630
L DFG+A + VGT YM PE + S ++ DV+S G
Sbjct: 148 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 207
Query: 631 VLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNV 690
+L + G+ T F +++ L + + N+ I+ P I E + ++++C
Sbjct: 208 CILYYMTYGK--TPFQQIINQISKLH---AIIDPNHEIEF--PDIPEKDLQ-DVLKC--- 256
Query: 691 GLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPAFTVRRGAY 734
C++ K R ++P +++ +I+ P + T Y
Sbjct: 257 ---CLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKY 297
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 67/164 (40%), Gaps = 25/164 (15%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS-----------DVFSFG 630
L DFG+A + VGT YM PE + S ++ DV+S G
Sbjct: 147 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 206
Query: 631 VLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNV 690
+L + G+ T F +++ L + + N+ I+ P I E + ++++C
Sbjct: 207 CILYYMTYGK--TPFQQIINQISKLH---AIIDPNHEIEF--PDIPEKDLQ-DVLKC--- 255
Query: 691 GLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPAFTVRRGAY 734
C++ K R ++P +++ +I+ P + T Y
Sbjct: 256 ---CLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKY 296
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVK 525
N F+L K+G G FG +Y G +Q +E+A+K
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK 38
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEY-----AMEGRFSEKSDVFSFGVLLLEI 636
L DFG++ G D A R G YM+PE + + ++DV+S G+ L+E+
Sbjct: 166 LCDFGIS---GRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVEL 222
Query: 637 VSGR 640
+G+
Sbjct: 223 ATGQ 226
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 14/81 (17%)
Query: 563 REENMLIYEYMPNKSLDSF--LFDFGLARIFGGNQDQAATK--RLVGTYGYMSPEYAMEG 618
+ EN+L+ S D F L DFG+A D+ T+ VGT Y +PE E
Sbjct: 161 KPENILV-------SADDFAYLVDFGIA---SATTDEKLTQLGNTVGTLYYXAPERFSES 210
Query: 619 RFSEKSDVFSFGVLLLEIVSG 639
+ ++D+++ +L E ++G
Sbjct: 211 HATYRADIYALTCVLYECLTG 231
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 575 NKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLL 634
N+ L+ + DFGLA D K L GT Y++PE + S + DV+S G ++
Sbjct: 155 NEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY 212
Query: 635 EIVSGR 640
++ G+
Sbjct: 213 TLLVGK 218
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 575 NKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLL 634
N+ L+ + DFGLA D K L GT Y++PE + S + DV+S G ++
Sbjct: 151 NEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY 208
Query: 635 EIVSGR 640
++ G+
Sbjct: 209 TLLVGK 214
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 177 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 575 NKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLL 634
N+ L+ + DFGLA D K L GT Y++PE + S + DV+S G ++
Sbjct: 151 NEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY 208
Query: 635 EIVSGR 640
++ G+
Sbjct: 209 TLLVGK 214
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Query: 503 LGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLVRL 556
+G G FG V++ KL + E+A+K++ + + F N E+ ++ ++H N+V L
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVKHPNVVDL 97
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 179 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 185 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 185 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 185 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 177 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 185 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 185 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 185 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 185 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 185 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 185 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 171 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 185 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 185 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+ DFGLAR N T +V Y Y +PE + + E D++S G ++ E+V G
Sbjct: 165 ILDFGLARTASTNF--MMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 170 DFGFAKRVKGR-----TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 205 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 185 DFGFAKRVKGR-----TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 205 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 80/210 (38%), Gaps = 66/210 (31%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-----LQDGQEIAVKRLSKASGQG--QEEFMNEVMV 544
N + + +LG G F V K + LQ + KR +K+S +G +E+ EV +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYE--------------------------------- 571
+ +QH N++ L + + +LI E
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 572 -YMPNKSLDSF--------------------LFDFGLA-RIFGGNQDQAATKRLVGTYGY 609
Y+ + + F + DFGLA +I GN+ K + GT +
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEF 183
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
++PE ++D++S GV+ ++SG
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 575 NKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLL 634
N+ L+ + DFGLA D K L GT Y++PE + S + DV+S G ++
Sbjct: 173 NEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY 230
Query: 635 EIVSGR 640
++ G+
Sbjct: 231 TLLVGK 236
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 497 FQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+ + +LG G FG V++ + G+ K ++ + NE+ +++ L H L+
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 556 LLGCCVEREENMLIYEYM 573
L ++ E +LI E++
Sbjct: 113 LHDAFEDKYEMVLILEFL 130
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ E+ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 575 NKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLL 634
N+ L+ + DFGLA D K L GT Y++PE + S + DV+S G ++
Sbjct: 175 NEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY 232
Query: 635 EIVSGR 640
++ G+
Sbjct: 233 TLLVGK 238
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 575 NKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLL 634
N+ L+ + DFGLA D K L GT Y++PE + S + DV+S G ++
Sbjct: 149 NEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY 206
Query: 635 EIVSGR 640
++ G+
Sbjct: 207 TLLVGK 212
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 23/104 (22%)
Query: 502 KLGQGGFGPVYKGKLQDGQ------EIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
++G+G F VYKG + E+ ++L+K+ Q F E + LQH N+VR
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQ---RFKEEAEXLKGLQHPNIVR 89
Query: 556 LLGC---------CVEREENMLIYEYMPNKSLDSFLFDFGLARI 590
C+ +L+ E + +L ++L F + +I
Sbjct: 90 FYDSWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKI 128
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 503 LGQGGFGPVYKG-KLQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGC 559
+G G +G V + G+++A+K+LS+ S + E++++ ++QH N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 560 CVEREENMLIYEYMPNKSLDSFLFDFGLARIF 591
+ P SL +F +DF L F
Sbjct: 92 ------------FTPASSLRNF-YDFYLVMPF 110
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 25/151 (16%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS-----------DVFSFG 630
L DFG+A + VGT YM PE + S ++ DV+S G
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 254
Query: 631 VLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNV 690
+L + G+ T F +++ L + + N+ I+ P I E + ++++C
Sbjct: 255 CILYYMTYGK--TPFQQIINQISKLH---AIIDPNHEIEF--PDIPEKDLQ-DVLKC--- 303
Query: 691 GLLCVQEFVKDRPNMPTVVSMLNSEIKDLPA 721
C++ K R ++P +++ +I+ P
Sbjct: 304 ---CLKRDPKQRISIPELLAHPYVQIQTHPV 331
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 495 NNFQLANKLGQGGFGPVYKG-KLQDGQEIAVK 525
N ++L K+G G FG +Y G + G+E+A+K
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGEEVAIK 40
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 503 LGQGGFGPVYKG-KLQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGC 559
+G G +G V + G+++A+K+LS+ S + E++++ ++QH N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 560 CVEREENMLIYEYMPNKSLDSFLFDFGLARIF 591
+ P SL +F +DF L F
Sbjct: 110 ------------FTPASSLRNF-YDFYLVMPF 128
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 25/151 (16%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS-----------DVFSFG 630
L DFG+A + VGT YM PE + S ++ DV+S G
Sbjct: 167 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 226
Query: 631 VLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNV 690
+L + G+ T F +++ L + + N+ I+ P I E + ++++C
Sbjct: 227 CILYYMTYGK--TPFQQIINQISKLH---AIIDPNHEIEF--PDIPEKDLQ-DVLKC--- 275
Query: 691 GLLCVQEFVKDRPNMPTVVSMLNSEIKDLPA 721
C++ K R ++P +++ +I+ P
Sbjct: 276 ---CLKRDPKQRISIPELLAHPYVQIQTHPV 303
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 25/151 (16%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS-----------DVFSFG 630
L DFG+A + VGT YM PE + S ++ DV+S G
Sbjct: 167 LIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 226
Query: 631 VLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNV 690
+L + G+ T F +++ L + + N+ I+ P I E + ++++C
Sbjct: 227 CILYYMTYGK--TPFQQIINQISKLH---AIIDPNHEIEF--PDIPEKDLQ-DVLKC--- 275
Query: 691 GLLCVQEFVKDRPNMPTVVSMLNSEIKDLPA 721
C++ K R ++P +++ +I+ P
Sbjct: 276 ---CLKRDPKQRISIPELLAHPYVQIQTHPV 303
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVK 525
N ++L K+G G FG +Y G + G+E+A+K
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK 38
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVK 525
N ++L K+G G FG +Y G + G+E+A+K
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK 40
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIV 637
L DFGL G A + G YM+PE ++G + +DVFS G+ +LE+
Sbjct: 198 LGDFGLLVELG---TAGAGEVQEGDPRYMAPEL-LQGSYGTAADVFSLGLTILEVA 249
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
L DFG+A G + A + VGT +M+PE + + DV+ GV+L ++SG
Sbjct: 174 LGDFGVAIQLGESGLVAGGR--VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFG A+ G T L GT Y++PE + +++ D ++ GVL+ ++ +G
Sbjct: 184 DFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 561 VEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
++R+E LI + D + DFG A D LV T Y +PE + +
Sbjct: 164 IKRDERTLI-------NPDIKVVDFGSA-----TYDDEHHSTLVSTRHYRAPEVILALGW 211
Query: 621 SEKSDVFSFGVLLLEIVSG 639
S+ DV+S G +L+E G
Sbjct: 212 SQPCDVWSIGCILIEYYLG 230
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 25/164 (15%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS-----------DVFSFG 630
L DFG+A + VG YM PE + S ++ DV+S G
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 254
Query: 631 VLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNV 690
+L + G+ T F +++ L + + N+ I+ P I E + ++++C
Sbjct: 255 CILYYMTYGK--TPFQQIINQISKL---HAIIDPNHEIEF--PDIPEKDLQ-DVLKC--- 303
Query: 691 GLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPAFTVRRGAY 734
C++ K R ++P +++ +I+ P + T Y
Sbjct: 304 ---CLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKY 344
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 576 KSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLE 635
KS + DFG A D +V T Y +PE +E +S+ DV+S G ++ E
Sbjct: 191 KSTAVRVVDFGSATF-----DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFE 245
Query: 636 IVSG 639
G
Sbjct: 246 YYVG 249
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRL 556
LG GG G V+ D + +A+K++ Q + + E+ +I L H N+V++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKV 73
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG---QEEFMNEVMVISNLQHRNLV 554
L +G+G FG V++GK + G+E+AVK S + + E VM L+H N++
Sbjct: 8 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LRHENIL 61
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG---QEEFMNEVMVISNLQHRNLV 554
L +G+G FG V++GK + G+E+AVK S + + E VM L+H N++
Sbjct: 7 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LRHENIL 60
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 547 NLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGT 606
N+ HR++ + EN+L PN L L DFG A+ + T+
Sbjct: 135 NIAHRDV---------KPENLLYTSKRPNAILK--LTDFGFAK--ETTSHNSLTEPCYTP 181
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
Y Y++PE ++ + D++S GV++ ++ G
Sbjct: 182 Y-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG---QEEFMNEVMVISNLQHRNLV 554
L +G+G FG V++GK + G+E+AVK S + + E VM L+H N++
Sbjct: 33 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LRHENIL 86
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG---QEEFMNEVMVISNLQHRNLV 554
L +G+G FG V++GK + G+E+AVK S + + E VM L+H N++
Sbjct: 46 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LRHENIL 99
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG---QEEFMNEVMVISNLQHRNLV 554
L +G+G FG V++GK + G+E+AVK S + + E VM L+H N++
Sbjct: 10 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LRHENIL 63
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG---QEEFMNEVMVISNLQHRNLV 554
L +G+G FG V++GK + G+E+AVK S + + E VM L+H N++
Sbjct: 13 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LRHENIL 66
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 80/212 (37%), Gaps = 70/212 (33%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-----LQDGQEIAVKRLSKASGQG--QEEFMNEVMV 544
N + + +LG G F V K + LQ + KR +K+S +G +E+ EV +
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 545 ISNLQHRNLV----------------------RLLGCCVERE------------------ 564
+ +QH N++ L E+E
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 126
Query: 565 ---------------EN-MLIYEYMPNKSLDSFLFDFGLA-RIFGGNQDQAATKRLVGTY 607
EN ML+ +P + + DFGLA +I GN+ K + GT
Sbjct: 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIK--IIDFGLAHKIDFGNE----FKNIFGTP 180
Query: 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+++PE ++D++S GV+ ++SG
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 80/212 (37%), Gaps = 70/212 (33%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-----LQDGQEIAVKRLSKASGQG--QEEFMNEVMV 544
N + + +LG G F V K + LQ + KR +K+S +G +E+ EV +
Sbjct: 8 NVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 545 ISNLQHRNLV----------------------RLLGCCVERE------------------ 564
+ +QH N++ L E+E
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 565 ---------------EN-MLIYEYMPNKSLDSFLFDFGLA-RIFGGNQDQAATKRLVGTY 607
EN ML+ +P + + DFGLA +I GN+ K + GT
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIK--IIDFGLAHKIDFGNE----FKNIFGTP 181
Query: 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+++PE ++D++S GV+ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 29.6 bits (65), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 80/212 (37%), Gaps = 70/212 (33%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-----LQDGQEIAVKRLSKASGQG--QEEFMNEVMV 544
N + + +LG G F V K + LQ + KR +K+S +G +E+ EV +
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 545 ISNLQHRNLV----------------------RLLGCCVERE------------------ 564
+ +QH N++ L E+E
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 126
Query: 565 ---------------EN-MLIYEYMPNKSLDSFLFDFGLA-RIFGGNQDQAATKRLVGTY 607
EN ML+ +P + + DFGLA +I GN+ K + GT
Sbjct: 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIK--IIDFGLAHKIDFGNE----FKNIFGTP 180
Query: 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+++PE ++D++S GV+ ++SG
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 80/212 (37%), Gaps = 70/212 (33%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-----LQDGQEIAVKRLSKASGQG--QEEFMNEVMV 544
N + + +LG G F V K + LQ + KR +K+S +G +E+ EV +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 545 ISNLQHRNLV----------------------RLLGCCVERE------------------ 564
+ +QH N++ L E+E
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 565 ---------------EN-MLIYEYMPNKSLDSFLFDFGLA-RIFGGNQDQAATKRLVGTY 607
EN ML+ +P + + DFGLA +I GN+ K + GT
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIK--IIDFGLAHKIDFGNE----FKNIFGTP 181
Query: 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+++PE ++D++S GV+ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 83/212 (39%), Gaps = 70/212 (33%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-----LQDGQEIAVKRLSKASGQG--QEEFMNEVMV 544
N + + +LG G F V K + LQ + KR +K+S +G +E+ EV +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 545 ISNLQHRNLVR------------LLGCCV----------ERE------------------ 564
+ +QH N++ L+G V E+E
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 565 ---------------EN-MLIYEYMPNKSLDSFLFDFGLA-RIFGGNQDQAATKRLVGTY 607
EN ML+ +P + + DFGLA +I GN+ K + GT
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIK--IIDFGLAHKIDFGNE----FKNIFGTP 181
Query: 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+++PE ++D++S GV+ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEF--MNEVMVISNLQHR 551
+ FQ+ GQG FG V GK + G +A+K++ + E M ++ V L H
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAV---LHHP 79
Query: 552 NLVRL 556
N+V+L
Sbjct: 80 NIVQL 84
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 80/212 (37%), Gaps = 70/212 (33%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-----LQDGQEIAVKRLSKASGQG--QEEFMNEVMV 544
N + + +LG G F V K + LQ + KR +K+S +G +E+ EV +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 545 ISNLQHRNLV----------------------RLLGCCVERE------------------ 564
+ +QH N++ L E+E
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 565 ---------------EN-MLIYEYMPNKSLDSFLFDFGLA-RIFGGNQDQAATKRLVGTY 607
EN ML+ +P + + DFGLA +I GN+ K + GT
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIK--IIDFGLAHKIDFGNE----FKNIFGTP 181
Query: 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+++PE ++D++S GV+ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 80/212 (37%), Gaps = 70/212 (33%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-----LQDGQEIAVKRLSKASGQG--QEEFMNEVMV 544
N + + +LG G F V K + LQ + KR +K+S +G +E+ EV +
Sbjct: 8 NVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 545 ISNLQHRNLV----------------------RLLGCCVERE------------------ 564
+ +QH N++ L E+E
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 565 ---------------EN-MLIYEYMPNKSLDSFLFDFGLA-RIFGGNQDQAATKRLVGTY 607
EN ML+ +P + + DFGLA +I GN+ K + GT
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIK--IIDFGLAHKIDFGNE----FKNIFGTP 181
Query: 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+++PE ++D++S GV+ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2OZL|B Chain B, Human Pyruvate Dehydrogenase S264e Variant
pdb|2OZL|D Chain D, Human Pyruvate Dehydrogenase S264e Variant
Length = 341
Score = 29.3 bits (64), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 659 WKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
WK + D +ID ISE GF + GL + EF+ +M + ++NS K
Sbjct: 56 WKKYGDKRIIDTP---ISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKT 112
Query: 719 --LPAAKQPAFTVRRG 732
+ QP V RG
Sbjct: 113 YYMSGGLQPVPIVFRG 128
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 29.3 bits (64), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 80/212 (37%), Gaps = 70/212 (33%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-----LQDGQEIAVKRLSKASGQG--QEEFMNEVMV 544
N + + +LG G F V K + LQ + KR +K+S +G +E+ EV +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 545 ISNLQHRNLV----------------------RLLGCCVERE------------------ 564
+ +QH N++ L E+E
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 565 ---------------EN-MLIYEYMPNKSLDSFLFDFGLA-RIFGGNQDQAATKRLVGTY 607
EN ML+ +P + + DFGLA +I GN+ K + GT
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIK--IIDFGLAHKIDFGNE----FKNIFGTP 181
Query: 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+++PE ++D++S GV+ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,203,826
Number of Sequences: 62578
Number of extensions: 949889
Number of successful extensions: 3670
Number of sequences better than 100.0: 863
Number of HSP's better than 100.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 377
Number of HSP's that attempted gapping in prelim test: 2266
Number of HSP's gapped (non-prelim): 1473
length of query: 760
length of database: 14,973,337
effective HSP length: 106
effective length of query: 654
effective length of database: 8,340,069
effective search space: 5454405126
effective search space used: 5454405126
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)